##gff-version 3
##sequence-region C03HBa0034A02.1 1 143702
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	match	12890	13607	0.916	+	0	ID=SGN-U577328_alignment_1;Target=SGN-U577328 16 730 +
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	match_part	12890	13607	0.916	+	0	ID=GTH_SGN_U_tom_match_part_1;Target=SGN-U577328 16 730 +;Parent=SGN-U577328_alignment_1
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	match	15679	17367	0.977	+	0	ID=SGN-U583272_alignment_1;Target=SGN-U583272 1 556 +
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	match_part	15679	15764	0.930	+	0	ID=GTH_SGN_U_tom_match_part_2;Target=SGN-U583272 1 87 +;Parent=SGN-U583272_alignment_1
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	match_part	16898	17367	0.985	+	0	ID=GTH_SGN_U_tom_match_part_3;Target=SGN-U583272 88 556 +;Parent=SGN-U583272_alignment_1
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	match	23307	23775	0.987	-	0	ID=SGN-U569136_alignment_1;Target=SGN-U569136 1 385 +
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	match_part	23707	23775	0.928	-	0	ID=GTH_SGN_U_tom_match_part_4;Target=SGN-U569136 1 66 +;Parent=SGN-U569136_alignment_1
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	match_part	23307	23625	1.000	-	0	ID=GTH_SGN_U_tom_match_part_5;Target=SGN-U569136 67 385 +;Parent=SGN-U569136_alignment_1
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	match	26607	30790	1.000	-	0	ID=SGN-U574359_alignment_1;Target=SGN-U574359 1 620 +
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	match_part	30579	30790	1.000	-	0	ID=GTH_SGN_U_tom_match_part_6;Target=SGN-U574359 1 212 +;Parent=SGN-U574359_alignment_1
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	match_part	29289	29547	1.000	-	0	ID=GTH_SGN_U_tom_match_part_7;Target=SGN-U574359 213 471 +;Parent=SGN-U574359_alignment_1
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	match_part	29126	29187	1.000	-	0	ID=GTH_SGN_U_tom_match_part_8;Target=SGN-U574359 472 533 +;Parent=SGN-U574359_alignment_1
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	match_part	26607	26693	1.000	-	0	ID=GTH_SGN_U_tom_match_part_9;Target=SGN-U574359 534 620 +;Parent=SGN-U574359_alignment_1
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	match	30297	30820	0.992	-	0	ID=SGN-U588293_alignment_1;Target=SGN-U588293 1 525 +
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	match_part	30297	30820	0.992	-	0	ID=GTH_SGN_U_tom_match_part_10;Target=SGN-U588293 1 525 +;Parent=SGN-U588293_alignment_1
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	match	39503	40830	0.999	+	0	ID=SGN-U573383_alignment_1;Target=SGN-U573383 1 1039 +
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	match_part	39503	39897	1.000	+	0	ID=GTH_SGN_U_tom_match_part_11;Target=SGN-U573383 1 395 +;Parent=SGN-U573383_alignment_1
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	match_part	40106	40449	1.000	+	0	ID=GTH_SGN_U_tom_match_part_12;Target=SGN-U573383 396 739 +;Parent=SGN-U573383_alignment_1
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	match_part	40531	40830	0.997	+	0	ID=GTH_SGN_U_tom_match_part_13;Target=SGN-U573383 740 1039 +;Parent=SGN-U573383_alignment_1
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	match	39564	40371	0.991	+	0	ID=SGN-U573385_alignment_1;Target=SGN-U573385 1 806 +
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	match_part	39564	40371	0.991	+	0	ID=GTH_SGN_U_tom_match_part_14;Target=SGN-U573385 1 806 +;Parent=SGN-U573385_alignment_1
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	match	39595	41072	0.988	+	0	ID=SGN-U573384_alignment_1;Target=SGN-U573384 1 954 -
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	match_part	39595	39897	0.983	+	0	ID=GTH_SGN_U_tom_match_part_15;Target=SGN-U573384 1 303 -;Parent=SGN-U573384_alignment_1
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	match_part	40106	40138	1.000	+	0	ID=GTH_SGN_U_tom_match_part_16;Target=SGN-U573384 304 336 -;Parent=SGN-U573384_alignment_1
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	match_part	40373	40449	0.987	+	0	ID=GTH_SGN_U_tom_match_part_17;Target=SGN-U573384 337 413 -;Parent=SGN-U573384_alignment_1
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	match_part	40531	41072	0.991	+	0	ID=GTH_SGN_U_tom_match_part_18;Target=SGN-U573384 414 954 -;Parent=SGN-U573384_alignment_1
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	match	40138	40790	0.998	+	0	ID=SGN-U588054_alignment_1;Target=SGN-U588054 1 653 +
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	match_part	40138	40790	0.998	+	0	ID=GTH_SGN_U_tom_match_part_19;Target=SGN-U588054 1 653 +;Parent=SGN-U588054_alignment_1
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	match	41532	48959	0.999	-	0	ID=SGN-U567058_alignment_1;Target=SGN-U567058 1 2809 +
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	match_part	48695	48959	0.996	-	0	ID=GTH_SGN_U_tom_match_part_20;Target=SGN-U567058 1 265 +;Parent=SGN-U567058_alignment_1
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	match_part	48513	48625	1.000	-	0	ID=GTH_SGN_U_tom_match_part_21;Target=SGN-U567058 266 378 +;Parent=SGN-U567058_alignment_1
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	match_part	46404	46664	1.000	-	0	ID=GTH_SGN_U_tom_match_part_22;Target=SGN-U567058 379 639 +;Parent=SGN-U567058_alignment_1
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	match_part	46172	46276	1.000	-	0	ID=GTH_SGN_U_tom_match_part_23;Target=SGN-U567058 640 744 +;Parent=SGN-U567058_alignment_1
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	match_part	45247	45312	1.000	-	0	ID=GTH_SGN_U_tom_match_part_24;Target=SGN-U567058 745 810 +;Parent=SGN-U567058_alignment_1
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	match_part	44898	45119	1.000	-	0	ID=GTH_SGN_U_tom_match_part_25;Target=SGN-U567058 811 1032 +;Parent=SGN-U567058_alignment_1
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	match_part	43381	43935	1.000	-	0	ID=GTH_SGN_U_tom_match_part_26;Target=SGN-U567058 1033 1587 +;Parent=SGN-U567058_alignment_1
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	match_part	42435	43031	1.000	-	0	ID=GTH_SGN_U_tom_match_part_27;Target=SGN-U567058 1588 2184 +;Parent=SGN-U567058_alignment_1
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	match_part	42055	42231	1.000	-	0	ID=GTH_SGN_U_tom_match_part_28;Target=SGN-U567058 2185 2361 +;Parent=SGN-U567058_alignment_1
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	match_part	41532	41979	0.996	-	0	ID=GTH_SGN_U_tom_match_part_29;Target=SGN-U567058 2362 2809 +;Parent=SGN-U567058_alignment_1
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	match	46410	48912	0.992	-	0	ID=SGN-U596878_alignment_1;Target=SGN-U596878 1 655 +
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	match_part	48513	48912	0.998	-	0	ID=GTH_SGN_U_tom_match_part_30;Target=SGN-U596878 1 400 +;Parent=SGN-U596878_alignment_1
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	match_part	46410	46664	0.984	-	0	ID=GTH_SGN_U_tom_match_part_31;Target=SGN-U596878 401 655 +;Parent=SGN-U596878_alignment_1
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	match	51480	51978	0.966	+	0	ID=SGN-U587870_alignment_1;Target=SGN-U587870 25 523 +
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	match_part	51480	51978	0.966	+	0	ID=GTH_SGN_U_tom_match_part_32;Target=SGN-U587870 25 523 +;Parent=SGN-U587870_alignment_1
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	gene	12890	13607	.	+	0	ID=GTH_SGN_U_tom_gene_1
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	mRNA	12890	13607	.	+	0	ID=GTH_SGN_U_tom_gene_1_AGS_1;Parent=GTH_SGN_U_tom_gene_1
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	exon	12890	13607	0.916	+	0	ID=GTH_SGN_U_tom_exon_1;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	gene	15679	17367	.	+	0	ID=GTH_SGN_U_tom_gene_2
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	mRNA	15679	17367	.	+	0	ID=GTH_SGN_U_tom_gene_2_AGS_1;Parent=GTH_SGN_U_tom_gene_2
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	exon	15679	15764	0.930	+	0	ID=GTH_SGN_U_tom_exon_2;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	exon	16898	17367	0.985	+	0	ID=GTH_SGN_U_tom_exon_3;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	gene	23307	23775	.	-	0	ID=GTH_SGN_U_tom_gene_3
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	mRNA	23307	23775	.	-	0	ID=GTH_SGN_U_tom_gene_3_AGS_1;Parent=GTH_SGN_U_tom_gene_3
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	exon	23707	23775	0.928	-	0	ID=GTH_SGN_U_tom_exon_4;Parent=GTH_SGN_U_tom_gene_3_AGS_1
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	exon	23307	23625	1.000	-	0	ID=GTH_SGN_U_tom_exon_5;Parent=GTH_SGN_U_tom_gene_3_AGS_1
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	gene	26607	30820	.	-	0	ID=GTH_SGN_U_tom_gene_4
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	mRNA	30297	30820	.	-	0	ID=GTH_SGN_U_tom_gene_4_AGS_1;Parent=GTH_SGN_U_tom_gene_4
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	exon	30297	30820	0.992	-	0	ID=GTH_SGN_U_tom_exon_6;Parent=GTH_SGN_U_tom_gene_4_AGS_1
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	mRNA	26607	30790	.	-	0	ID=GTH_SGN_U_tom_gene_4_AGS_2;Parent=GTH_SGN_U_tom_gene_4
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	exon	30579	30790	1.000	-	0	ID=GTH_SGN_U_tom_exon_7;Parent=GTH_SGN_U_tom_gene_4_AGS_2
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	exon	29289	29547	1.000	-	0	ID=GTH_SGN_U_tom_exon_8;Parent=GTH_SGN_U_tom_gene_4_AGS_2
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	exon	29126	29187	1.000	-	0	ID=GTH_SGN_U_tom_exon_9;Parent=GTH_SGN_U_tom_gene_4_AGS_2
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	exon	26607	26693	1.000	-	0	ID=GTH_SGN_U_tom_exon_10;Parent=GTH_SGN_U_tom_gene_4_AGS_2
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	gene	39503	41072	.	+	0	ID=GTH_SGN_U_tom_gene_5
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	mRNA	39564	40790	.	+	0	ID=GTH_SGN_U_tom_gene_5_AGS_1;Parent=GTH_SGN_U_tom_gene_5
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	exon	39564	40790	0.991	+	0	ID=GTH_SGN_U_tom_exon_11;Parent=GTH_SGN_U_tom_gene_5_AGS_1
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	mRNA	39595	41072	.	+	0	ID=GTH_SGN_U_tom_gene_5_AGS_2;Parent=GTH_SGN_U_tom_gene_5
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	exon	39595	39897	0.983	+	0	ID=GTH_SGN_U_tom_exon_12;Parent=GTH_SGN_U_tom_gene_5_AGS_2
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	exon	40106	40138	1.000	+	0	ID=GTH_SGN_U_tom_exon_13;Parent=GTH_SGN_U_tom_gene_5_AGS_2
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	exon	40373	40449	0.987	+	0	ID=GTH_SGN_U_tom_exon_14;Parent=GTH_SGN_U_tom_gene_5_AGS_2
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	exon	40531	41072	0.991	+	0	ID=GTH_SGN_U_tom_exon_15;Parent=GTH_SGN_U_tom_gene_5_AGS_2
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	mRNA	39503	40830	.	+	0	ID=GTH_SGN_U_tom_gene_5_AGS_3;Parent=GTH_SGN_U_tom_gene_5
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	exon	39503	39897	1.000	+	0	ID=GTH_SGN_U_tom_exon_16;Parent=GTH_SGN_U_tom_gene_5_AGS_3
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	exon	40106	40449	1.000	+	0	ID=GTH_SGN_U_tom_exon_17;Parent=GTH_SGN_U_tom_gene_5_AGS_3
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	exon	40531	40830	0.997	+	0	ID=GTH_SGN_U_tom_exon_18;Parent=GTH_SGN_U_tom_gene_5_AGS_3
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	gene	41532	48959	.	-	0	ID=GTH_SGN_U_tom_gene_6
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	mRNA	41532	48959	.	-	0	ID=GTH_SGN_U_tom_gene_6_AGS_1;Parent=GTH_SGN_U_tom_gene_6
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	exon	48695	48959	0.996	-	0	ID=GTH_SGN_U_tom_exon_19;Parent=GTH_SGN_U_tom_gene_6_AGS_1
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	exon	48513	48625	1.000	-	0	ID=GTH_SGN_U_tom_exon_20;Parent=GTH_SGN_U_tom_gene_6_AGS_1
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	exon	46404	46664	1.000	-	0	ID=GTH_SGN_U_tom_exon_21;Parent=GTH_SGN_U_tom_gene_6_AGS_1
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	exon	46172	46276	1.000	-	0	ID=GTH_SGN_U_tom_exon_22;Parent=GTH_SGN_U_tom_gene_6_AGS_1
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	exon	45247	45312	1.000	-	0	ID=GTH_SGN_U_tom_exon_23;Parent=GTH_SGN_U_tom_gene_6_AGS_1
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	exon	44898	45119	1.000	-	0	ID=GTH_SGN_U_tom_exon_24;Parent=GTH_SGN_U_tom_gene_6_AGS_1
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	exon	43381	43935	1.000	-	0	ID=GTH_SGN_U_tom_exon_25;Parent=GTH_SGN_U_tom_gene_6_AGS_1
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	exon	42435	43031	1.000	-	0	ID=GTH_SGN_U_tom_exon_26;Parent=GTH_SGN_U_tom_gene_6_AGS_1
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	exon	42055	42231	1.000	-	0	ID=GTH_SGN_U_tom_exon_27;Parent=GTH_SGN_U_tom_gene_6_AGS_1
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	exon	41532	41979	0.996	-	0	ID=GTH_SGN_U_tom_exon_28;Parent=GTH_SGN_U_tom_gene_6_AGS_1
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	mRNA	46410	48912	.	-	0	ID=GTH_SGN_U_tom_gene_6_AGS_2;Parent=GTH_SGN_U_tom_gene_6
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	exon	48513	48912	0.998	-	0	ID=GTH_SGN_U_tom_exon_29;Parent=GTH_SGN_U_tom_gene_6_AGS_2
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	exon	46410	46664	0.984	-	0	ID=GTH_SGN_U_tom_exon_30;Parent=GTH_SGN_U_tom_gene_6_AGS_2
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	gene	51480	51978	.	+	0	ID=GTH_SGN_U_tom_gene_7
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	mRNA	51480	51978	.	+	0	ID=GTH_SGN_U_tom_gene_7_AGS_1;Parent=GTH_SGN_U_tom_gene_7
C03HBa0034A02.1	GenomeThreader_SGN_U_tomato	exon	51480	51978	0.966	+	0	ID=GTH_SGN_U_tom_exon_31;Parent=GTH_SGN_U_tom_gene_7_AGS_1