<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-12-01 01:36:25"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/GenomeThreader_SGN_E_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E370577" ref_strand="+" ref_description="SGN-E370577 [TUS-27-I8]">
      <seq>gaagctgtacctgaacaactaagaggtgcttttggccaggcatttaatactctgcaacaacttcctgtccccattagagatgctgtgtccagtggcatgaaagtttctctaagcgggacctttcagagacttattctgatttcctaccttgatgacgagatcctgatcataaggaatactgcaggagaacctgaggttctaacaaggttggaagcaggacctgatccgcaaaatataaccgaatatgagagttaagtgactgtaggcacattttgcatgaaaaaaaaaaacaactttgtttttactattagttcatatttctatgtaacataagataaataatacattggcaatatctctcattgtgtaatcccacatcgatgagcaacgaacatgagctgaccccattattggtaaaaacttgccgtggttttgtgaatgagtccttgaggctaaagaagtggttgtctgagttggtattaaaaaaaaaaaaaaaaaacaaaaaattaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C03HBa0013A17.1" temp_strand="-" temp_description="C03HBa0013A17.1  AC238559.1 htgs_phase:2 submitted_to_sgn_as:gi|261249975|gb|AC238559.1| upload_account_name:jianfeng-ren Solanum lycopersicum chromosome 3 clone C03HBa0013a17, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces">
        <position start="10023" stop="7688"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9723" g_stop="9612" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="112" r_length="112" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="9611" i_stop="8768" i_length="844">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="8767" g_stop="8715" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="113" r_stop="165" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="8714" i_stop="8315" i_length="400">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="8314" g_stop="7991" g_length="324"/>
          <reference_exon_boundary r_type="cDNA" r_start="166" r_stop="490" r_length="325" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="491" polyA_stop="506"/>
      <MATCH_line gen_id="C03HBa0013A17.1" gen_strand="-" ref_id="SGN-E370577" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>489</cumulative_length_of_scored_exons>
        <coverage percentage="0.933" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C03HBa0013A17.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E370577" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9723" e_stop="9612"/>
          <exon e_start="8767" e_stop="8715"/>
          <exon e_start="8314" e_stop="7991"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGCTGTACCTGAACAACTAAGAGGTGCTTTTGGCCAGGCATTTAATACTCTGCAACAACTTCCTGTCCCCATTAGAGATGCTGTGTCCAGTGGCATGAAAGTTTCTCTAAGTAAGATTTAAGTATTTTCAATATACTCTATGCATATATGTATCTATGGTGTACAAGTGTTGTTGAAGTATTGCGATCTGGGGAGGGTAGAGTCTACGGAGACCATGCCCCTACCTCAAAGGTAGAGAGATTATTTTCGATAGACCCTCCGCTCAATAAAAGAATGACAGATAGCAATGGAAGTACAAGAACCAACAGATTGTAACAAAAATAATAGATAATAAAAGAATAATACTAAAAAAAATAATATGACAGAAAAAGTACAAAAGTAAAATATCTCAATAACCTAAATTATCGTTAAGAAATTCAAATTTAAATCAAGTAGACTACTGCTGCAACTAACCTGTTCATTGTTCAAATTGGCAGTAACAGAAGTAATTTTTAACACACTTTAAATGTCTGTCAATTCTGTTTGAAGCCTCTCAATCATGTCAAATCTTCAAATGTTTAAATCTAGCGTTGGTAAAAGCAGTTCGAAGTTAATTTTCTGCCTGATCTGTCCTTTAAGCAAGATTTGTTTTTGGTTATTTTGATTCTTTGATCTTATTCAAGCTTATATTCTCATTTGCATCAGCATCTGCCTTTTGAAAAATTCGTTTGTACTTCAGCACATTAATGTTGCTTGAACTGCCATATTACGTATATTTTGGTTACTAATGCTTTTTTCAAAGGCTTCTTATTTTTAGTTCCTAGGACATATCCTAATCTTTTAAAAAACAAAGAATAAACTAAAGTAGATAAGAAAGATAGAAGCTTGAAGAAAATAACTTTTGTAGATAAATGATATTGTTACTGTTTAGGATTTATTTATATTGCTTCTCACTCTGGGCTGTTACAATATCAGGCGGGACCTTTCAGAGACTTATTCTGATTTCCTACCTTGATGACGAGATCCTGGTGAGTCCTCTCGCTGCATTCTTTTTCTTTGTAGCACCATTACTTGATTTTTTTTCATACACCGTTTGTATATAGCACCACAATATCTTCACACAAGTTCTGGAAATTGTTTTAAGTAACCTTTTAGCTTTCACTAGATTCATATTGGGATTAACTTTTATAACAGAGATTTTTTGAACTTCATATATCTAGACACTATTATAACATCAAGGAAAATTGGTTTTGATTCTAATTATGCAGAAGTTGTAAGTTCTTATCTATAGAGCTGAGTTGTTGTGCCTTCGAATGCTCGTAAAGAACTATGAATCAAGCATTGCTGCTATTACAAGATCAAAAGTTAGTTCGACAATTGAACCTCAATTTTTTTAACATACTCTACTAATCTGCTGGTTGGGTGCAGATCATAAGGAATACTGCAGGAGAACCTGAGGTTCTAACAAGGTTGGAAGCAGGACCTGATCCGCAAAATATAACCGAATATGAGAGTTAAGTGACTGTAGGCACATTTTGCATG-AAAAAAAAAACAACTTTGTTTTTACTATTAGTTCATATTTCTATGTAACATAAGATAAATAATACATTGGCAATATCTCTCATTGTGTAATCCCACATCGATGAGCAACGAACATGAGCTGACCCCATTATTGGTAAAAACTTGCCGTGGTTTTGTGAATGAGTCCTTGAGGCTAAAGAAGTGGTTGTCTGAGTTGGTATTAAACATATC</genome_strand>
        <mrna_strand>GAAGCTGTACCTGAACAACTAAGAGGTGCTTTTGGCCAGGCATTTAATACTCTGCAACAACTTCCTGTCCCCATTAGAGATGCTGTGTCCAGTGGCATGAAAGTTTCTCTAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGGACCTTTCAGAGACTTATTCTGATTTCCTACCTTGATGACGAGATCCTG................................................................................................................................................................................................................................................................................................................................................................................................................ATCATAAGGAATACTGCAGGAGAACCTGAGGTTCTAACAAGGTTGGAAGCAGGACCTGATCCGCAAAATATAACCGAATATGAGAGTTAAGTGACTGTAGGCACATTTTGCATGAAAAAAAAAAACAACTTTGTTTTTACTATTAGTTCATATTTCTATGTAACATAAGATAAATAATACATTGGCAATATCTCTCATTGTGTAATCCCACATCGATGAGCAACGAACATGAGCTGACCCCATTATTGGTAAAAACTTGCCGTGGTTTTGTGAATGAGTCCTTGAGGCTAAAGAAGTGGTTGTCTGAGTTGGTATTAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E728404" ref_strand="+" ref_description="SGN-E728404 [LA17CH03]">
      <seq>cattttcttgccggcgtacgacctatacatctccttgtacacctatcgccattttccgaggagggagaagaagaaatgcaagaaagatgttgagggtctgtagagctatggttgagaagacagtacaaggggcttcttctacttttgctaaggaaatggaaaggctttcagctaaagagtctctgcttcttgcattcaaagatgctggtggatttgaagcattggtcactgggaagacaacagatgtacaatgcattgatgtgaatgagaggattattagtctcgagaagctcaatccgacgcctcgtccctcaacgtctcccaatttggaaggacgatggaattttgagtggtttggagctggtagcccagttcttcttcttgccaaaatattttttgggagaattcctccaacattggcaaatttatcaaaattggatgtgttgatcaaggatggatgtgggactgctaccgcacaagtcaaaatactaaattcgattgagaataaatttatcatctccaccaagtatagtgttgaagggcctcttcgtatganagaagagtatgttgaaggggaatttgaatctccnaaagtcgatgaggaagctgtacctgaacaactaagaggcgggacctttcagagacttattctgatttcctaccttgatgacgagatcctgatcataaggaatactgcaggagaacctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C03HBa0013A17.1" temp_strand="-" temp_description="C03HBa0013A17.1  AC238559.1 htgs_phase:2 submitted_to_sgn_as:gi|261249975|gb|AC238559.1| upload_account_name:jianfeng-ren Solanum lycopersicum chromosome 3 clone C03HBa0013a17, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces">
        <position start="22606" stop="7987"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22306" g_stop="22113" g_length="194"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="194" r_length="194" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="22112" i_stop="19780" i_length="2333">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19779" g_stop="19658" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="195" r_stop="316" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19657" i_stop="19580" i_length="78">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19579" g_stop="19496" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="317" r_stop="400" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19495" i_stop="13504" i_length="5992">
            <donor d_prob="0.912" d_score="1.00"/>
            <acceptor a_prob="0.950" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="13503" g_stop="13407" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="401" r_stop="497" r_length="97" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="13406" i_stop="9829" i_length="3578">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="9828" g_stop="9697" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="498" r_stop="627" r_length="130" r_score="0.970"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="9696" i_stop="8768" i_length="929">
            <donor d_prob="0.234" d_score="0.94"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="8767" g_stop="8715" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="628" r_stop="680" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="8714" i_stop="8315" i_length="400">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="8314" g_stop="8287" g_length="28"/>
          <reference_exon_boundary r_type="cDNA" r_start="681" r_stop="708" r_length="28" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C03HBa0013A17.1" gen_strand="-" ref_id="SGN-E728404" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>710</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C03HBa0013A17.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E728404" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22306" e_stop="22113"/>
          <exon e_start="19779" e_stop="19658"/>
          <exon e_start="19579" e_stop="19496"/>
          <exon e_start="13503" e_stop="13407"/>
          <exon e_start="9828" e_stop="9697"/>
          <exon e_start="8767" e_stop="8715"/>
          <exon e_start="8314" e_stop="8287"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATTTTCTTGCCGGCGTACGACCTATACATCTCCTTGTACACCTATCGCCATTTTCCGAGGAGGGAGAAGAAGAAATGCAAGAAAGATGTTGAGGGTCTGTAGAGCTATGGTTGAGAAGACAGTACAAGGGGCTTCTTCTACTTTTGCTAAGGAAATGGAAAGGCTTTCAGCTAAAGAGTCTCTGCTTCTTGCAGTTAGTGCTTATCCCTTTTTACTCCAATTTATTTGTTTTTTCCTATTTAAGTTTAAGTAACTCATTAAAATTGTGGAAAATTTGAGGGGAGTGTTAAGAGTGTCTCGCATTAGTTATGTGAATGATTTGTTGTCTTCTAATATGTTTTTGGGAAAGGCATTTCTCACCTCGCCAGCTAAATTTTTGTGTTGAAGGTCTATATTATTAACAATAGTTATGTTTATGTTTGTGTTGCTTGTTTTAATTTAAGAGTAGTTTGTAAATCCAACTTGTACTAGGTAATCATAGGTATCTATTGGGATACTCATGGACATTCTCTCTGCCACTTGTAGATTATTGTCATGTCTACTTCTTATTTAATGGCCCATTCTATTTAATAGACTTAAATGATAGAATTCACAGCAGTACATAAACAAAAGGCAATATGACCCTTAACTTGGCGATAGCGGACAATTATGAACGTCTATTATGGATGTGTACAAGTAAGCACTTAAACTTGTATAAAATTGAATAAATAGACACAATCGTCCTACATGACAATTTTGTGTCCTGTATGGCGTCCTATGTGTATTGTCCGCTGGAGCCAAGTTTAGGGTCAACTCTATGTATTATGCCTAAACAAAATAACTAAAAGAAAAATCAAGAACGGTGGTGTAGACTGACAGCAGAGATCTATTCTCTTTGTTTCATTTTACTTGACACTTTCTTTTTTAGTATGTTAAAAAGAATGACATCTTTCTATTTTTATGGAGAATTGTCATTCATGACAAGTATGGTCAAGATGACCAGTGATGTCCAAAGGTGGTTGTGAGCCCCCATGGTGTAGGAGTTTGGAAAGCAATCAGATCCCTTTGGTCTTTGATGGCTGGAAAAATTAGTTTAAGAGTGGGCAATGGAAGGAAAATTGTTCTTTTGGGGTGATAATTGACTGGGGCATGGACCTCTAAGGGAAGTCTTCCCTGAATTCTTTAGCATTGCCACTATGCCGAACATTAATTTGGAATCAGCAAAAAGAGTACAGGGATGGAATTTACTGTTAGAAGGCTACTGCATGATTGGGAGCTGGAAAGAGTTGTTGAATTTTTCCAGACCTTGAAATCATTCTAAGGGTTCAAAGATATTGAAGACTCACTTATATGGAAGCCTACCGGTATATGACCTAATTCTGTTAACTTAGCTTATAGCATTCTGATTAGGCACAGACAGTCAACTAATTAGAGTCCATGGAGATCCATTTGGAAGATGAAGGCTCCTTTTTAGGTGGTATGCTTTTCTTGGTTAGTAGCAACAAATGCTTGCCTCACACAGGATAAAGTATAAACTTCAAAAAAGGGGATTCCAACTGTGTTCTAGATGCTTTTTGTGCGGAGCTGCTAGGGAAAATAATAGTAACCTATTCATTCATTGTCCTGTTACTGGACAATTAAGACAACTATTCTTGAACATGTTAGGAATCAGATGATCAGTGCCAACAAGTGTTAATCTACTGAGATGTTGGAACCAGAATGATGGGGCAGTTAGTCAGAAAAATTGGTGGAAACTTGTCCCTGCTTGCGTATGGTTAGATCATTTAGAAGGAGCGGAACTATAGAGCTTTTGAAAGAAAAATACAATTTTGTGGCGATAATCAAGATGAACTGTATACTTTTGTTTTGTTTTTGGTGTAAAGAAATCTATGCTAAGGAGGCTGAATTACTAGTTGATATGATAGAATCCTTGTGAAGCAGTAGCCTAAGCTAAGCTTGGTTGGGATCTTGTTGTGTCTTTTGCACTGTCATCGTGCAACTTATATATATATATATATATATATATAGTTGTTGCCAGTTTCAAAGAACACACACATTTAACTTTAAACTTCTCATTTACCCTAAATAACATGATTTTGTAGGTACATAAATGTCATGACATGCTTAAGGCCACATGTTTGATAACTCTTTTTTCTTTTATAAATTTCATGTACAGTTTCACATAAAATAAGGTGGGTATTATATGTACTCTTGTCTCTTTACTTTTTTTCCTGCAATTCATAATTTTCCTTTGTTTAAATTCTTTCATTGTTTCTCTATGATTGACTCATCAAAGAATTGGCCTTGGGTAAAGTGAACGTTCTAATATATCCCATTTCCATTTGAGAAAAGGCTCAGGGAATGGTGGAAAGAGTGTCACAGGAGATACAAAGTTGTCAGGTCTGCAGGAGGGTTAACTTGGTGGAACCGAGAGGTTTAGAGAACAATATTATTGATAATATTGCAATGGTTATTTTCATGAAATTGCACTTCTGTTCTTTCTTTCTGTCCCTTAAGCACTAAAAGAAATTAATTACACTGTTATAGTTCAAAGATGCTGGTGGATTTGAAGCATTGGTCACTGGGAAGACAACAGATGTACAATGCATTGATGTGAATGAGAGGATTATTAGTCTCGAGAAGCTCAATCCGACGCCTCGTCCCTCAACGTAAGGTGTTAAATCTTACCAATAAACTTAATTTTCAAGATTCTTGACAAGGTACTCATTGGTGGTTTCATTTCCCAGGTCTCCCAATTTGGAAGGACGATGGAATTTTGAGTGGTTTGGAGCTGGTAGCCCAGTTCTTCTTCTTGCCAAAATATTTTTTGGGTAACTTCTATTTTTTGGGATAACATTCACTTCTATTTTTCCTATTCCAACTTAAACTCATTAGTGTATGAACTACGTATACGAAATGAAGTACTTGTGCAAATAATGAATCAATTCTACATGAAGTAGTTTATTCTTTTTCTGCAACCTGCATTGTGCTACTAATAAATAATTGTCATACTAGAGATCAAATGGAGACCATGTCTTCAAGGCTAACAATTTAGAGAAGAAAGTTTGAACCATGGGTATGATGGTTGCCTTCCACTATCTAAAGTGCATGCTAAATGTTTAAGCATCTAATCATTCCCTTCCATACCTTTGCACCAGTGGCAAATTAAGTGATAGTTGAGTGGGGAAATTGCACCTACTTAAATTTGATAAAATTACGCTATATACCAAAGCTTTTGCTTAGAATTTCAAATCATTCCATTTTGAACCTGATAATTTCCTAGAAAAAGTGAGAAATTGGTAGAATATTTTTATCTGAGGCTGAAATTTGATAAAATTACGCTATATGCCAGAACTTTTGCTTAGAACTTTGACTCTTTTCCATCTTTGAACCTGATAATTTCCTAGAAGAAGTCATATTGGTAGGATAGTTTTATCTGAGGTGTCTTGCATAAGGGAAAAAGTAAAATGCTAAAAGAAATGCTTTTAGCTTCTTTCATCCAACTAAAGGGCCTTCCGTTTATCTTTTCATTTTCTCTCTTTCATTTCTGATGACACAATATTTGAATTACTTTATTTTCTTACGTGCACTTGCTTTTAAGCTTAGAAGTCACAGCTAGCCCACAAAGTTGCTTGTCAGGGCCACTTTATAAAATCAACAAAATTGCTTGTCAGCTATCTTCTGGCTATATAAAATAAAAATAAAATTTATGATTTGTTTTGTGTGAATGTACTATGTATAGTTAGAAAGTTAGCCAAGATGGGTTGATATATTCATATTACTTGTATTAGTGGGAAGGTGTGTACCCAGTGAAACAGTTGAGATACGTGCAAGCTTGTTCAGATACTATGGTTATTCTCCCAAAGAATAAGAAACCCCACAAAGTGATGAGATGAATCACTCTTTTAGTCCACCAAACTAGATAAAGGTAAAGAAATAATCTTTGCTCTCACTGGGAAAAAATTCTGATTGGGAAGAAAAGGTATGGGAATAAGAAAAGAGGTCCAACCTTTTTAAGGAATGCAACCGATTTTATGACATTGAATTTTGAAATTTGGCGAAAGACCAAACTAAACCTCCATTCATGGAGGCCAATTGTTTCCCTTCAGTTAGGTCTTTACTATTTAAGTACATTATTGTCTACTAGGTATTTGCATGATTTTTCTTTTGAAGGAAAGACAACATTTACCATAATTGGTTGAAATTTCCTTCCCAAAAATTGAAAGTAAAGATCTTTCATATTTAGTTAATCTTTTTCACGGAGAAAATAATTTTGGACCTCTATAGATTGTGGTTATTTCCTTCTCACTTGGTAGCATCCACAATGCAACTATTAAAGGGGGGGGGGGGGGGTTACAGAGTTTTGGGGAGAATTTGTGAAATACAAGTTTCTATTTTGAAACTAGTAATGTTGTATTCCTCAACATTAAGGACATGTTGGAAACCTTCGAAAAAGAGAAAACAGTAATTAAAAGTATTCCCTACAAAAGTCCTAACAAATCTACAAGCTGCTTTGATCCTCTATACCTTTCCATTTGACTTTCTGAATGAAATTGTACCTATCTCCAGAGTATATACTATCCCTCTCACTCCAAGTAGTCCACTTGATGCAATGTAGAATTATCCTCCACCATTTCTTCTGGCTCTTGTTACCTCCTCTTCTGATCCAACAACTCAAAAATCTACAACATGCGTAGGAATGGTCCACTTTGTCTTTGTGAGACTGAAGAAGATTGTCCATCGTCCATCTCTTTTGTATATGTGCAGTGCAAAATAGGTCTCTGTCTGCTTCTGCATAGTATGTATCTGGATACAATATTTAACCCCCTTCTCTTCAAAACTTCATGTTGTCAAGCAATATCTCCTAGCTACCAACCATGTAAAGCATTTTACCTTCGTTGATGCTAGGTTTTTCCAAATATTCCTCCATACTTTTTGACGGTCTCTAACTTGCTGAACATTTCTTTTTTATAAGCCCTGTTTACTGTTAATACCCCCTCCTAACTGTGTTCCACCTCAAAAATGTCAGAGTCAGAAGTGGTACCTTTGAAATCCTCTATCCCTTTTAGAAAATTGGCACTCTATCCACCTTCCAGTCATTCAATAACTTGCTAAAGGATAAGTTCCATCCTTGTGGAGTCCAACATTTATTCATAGGAGCCTCAAGCGTTGTTCTGGAGAGCAAGAAGCGGAAAAAAGCGAAGAGCGCTTGCTTCACTGAAGCTGAAGCAAAGCACACATTTTTTTCTACTAAAGTGTTGTTCAGAACAAAAACAAAAAATAGTAATATGCATATATAAATAACCAAGAACTCAATAGATATAACATATTAAGCAAATCTTTCAGTTCTTAAATTAGAAAGCTTATAAAAGATGGTCAATAATCCTCATAATCATAACATATTAAGCAACTCGTAATCATAACATATTAAGCAAATGCAACATCAAAACCAAATAAGTAAATAGACAGAGCATAACAGGGGAAAGAAAACCCTAGAAGTAGTTCCTGAAAGCCTGAAAGAGAGTCCAGAGAAGACGAAGAAAAGAGATTAAGAGAGGAAGAACTTATCTTTTTGAGTCGCAGCAACAGATGTTGAAATGTTTGAGTCACAGAAGAAGAAGAAGAAGAGCGAAATGTTTAAGTCACAGCAGGCAAGTGTGTTATACAGAAGGAAAAAAAACCTAACAGCACTTAAGCACGCTTTTTGTCATCTTTGCTTTAAGCGCGCTTCAAGCTTCGCCTACTGAAGCACTCATTTTTTTAGCAGCGCCTCGCTTCAGACCATATAAGCGCAGTGCTTGCACCTCGCCTCGTTTCGCGCTTTAAGCGCGCTTTTTGTCGCTTTTCACAACACCCTAAGGATTATTTAAGGAGAAGTTCTATCTTTGTGGAGTCCAACATTAATTCATAGTAGCCTCGGGATTATTGCACAAGACAAACAGATCAGGAAAGTATTCCTTTAGAGGAGTCTGTTCATTCCAAGCATCCCTCCAAAATTTATTGTTCTATCATCTCCCACTTTAACTAACATGTTCACTTCTAACTTGGGCCACAAAGCTCTGATAGTTCTCCATACCCCAACACTTCTTATCGCTGCACCAAGGGCTGGACTCACCAAATTTGCATTTAACAACATCCTTCCATAAGGCTTGCCCTTGTCTTTTGTATCTCCATAGCCACTTCAACAGTTCCTGATGCCCAAAGCCCCCAAATCTTTGCTAAGTTTAACCAAACTAGTATTGGGAACGTACGATGCACGTTTGTCCCCTACAACTGCAAAAAATTTGGACATCGAGTGAAAGATTTATGGTGCTTTCAAAATAGAAACAATTCAATCACAATAAGTTAACTAAGATACATAGAGCCTTACAGCACGCCTCACGGGAAACCAAAGCTTGAAAACAATTTCAGGAATTAAATATGGAGAAACAAAAACTGACCTGAAAAATGCCTCTCCTACTTTCTAGGTGAGAGAGTACCCTCTGTTCGGTAGGTCACCACCAACCTCATCCTTCTCCTCAGCTATCTCCGTCTGTGATAGCTTTCTCCTTCCCTTACAGCAGTTCCCTTCCACAGACATGGAGGAAAATAGGATTTATTTCCACACCGGTTTCAAGTCATTCAATAATATCAGATGGATATCTGGGGAGGAAGCCTAGTTTGATTGGGTGGAGCTTAGTATAAACTTGATGAGAAGAATAAATCTCAGCAAAAAAATGATGGAGTGGATTTGTTTTCTCCTGGAAGAAGCCTCAAACGACAATAAGAATCTTATGAGGAGATTGAGAATGAACTATGAAGGACCAAATGGCAGAGTATTTTAGTACAAGGAAGTTTAATGCCCGCGGAAGACTACTCTTGGAGGATTGAGGCCATGAGCGTATAATTGGATTTATAAAAGTTGATTGGGTAGGATCACCCTTTTATAGATTTTCTATATCCGGATATTGTGTTTAGGAGGTCATTTGGTGGCTTAGAAGAGTAAGTAACAAAGTGTGGTTGATCTAGTGCAAAAGCAGAATACTGAGCAATAGTCATAGCAAGTTGTGAGCTAATTTAGATTAAACAGTTGCTGAGAGAACAATGATAATTGAATGAAAGAAAAACCACTGGTAGGGATATGAATGGAGTCTCGCTCAGTTAAGAGAGTTGTAGGATTCGTAAAATAGGAAAAGAGCATCTCAAAGTATGGGGCAAATGGAACTTGTGTGTGATAGCCAAATGTCCCTTCATATCACATCAAATCTGGTATTTCATCGGAGGACGAAGCACATTGAGATTGACTCTCACTTTGTCAAAGAAAGATAATCTCGGAAGATACTGTTACAAAATTTGTAAAGTTGAGTGATTAGCTTGCAAATGTCTTCACCAAGTCCCTCACCGGTCCTCGTATTAGTTACTGTTGGATATGTAGCAAGAATTGATGGGAAATAGAGGAAAGAAGAGGAATTTGAAGAGGAAAGAAGAGGAATTTGAAAAGTTTAGAACTTGAAAGGTTGGGAACTTGAAAAGTCCTCTAATGCTTTAATGAAAAAGGCAATAGTCCCTCATCGGTAATGGAAATGAAAATAGGAGAGTTTAAATAAATAAACACTCCTATTAATTGTTAAAAGGGTTGTAAAAAGGGACCCCCCTCGCGCCGTCGTCGTCGCTCGCTTCGGCGTCGGCTACGGCTTTGGCAAATGATCGAGAGATAATTTTTTGGACAAATTTATTTTAATTATTTATTTAATTAATTTAATGGCCAAAAATTATTTTCAATTAATTAGTTGATAACAGAAGTTAACCGAAATGTTTTCAACTTTTTAGTTAACCCGACCCAACTCGGATCGCGCACGTGACCCGTTTTAAATTCCGTTATATTTAAAAATTTCCGTCATGACTGTTCTGAAAGGTTGCAACTTTCAGGAACAATCAATACCATTTGAAAGTTTGCAACCTTTCATTAATGGTCGTGTCAATTCTGAAAGGGTTGCAACCTTTCAGAATATATTCTTCTTGCCTATAAATACCATTCAGTCTTCAGAATATTTTCCTCCGAATTTTCTAGATCTTCCTTCTTCTTAAAAACACATATTTCTTCGTGTACTTTCCTGCTGTGGATTGATTCGCTGACAGTAGAGTTTTTGGTATCTATACTCTACTGATTAAGATCATTTTACCTTGGGAGGTTATATTCCAAATCAAACCTCGGATACTAGAGGGGAATAATTTCCTTAAGGGGACACTGTGAATTCAGTGGACTTGATTTTCTTCCTATATTATTAAAAAAAGTATTCCAGATTCTGGTAAGTTTTAAAGATTCAATTTTTTTTTTTACCAATAAATTTCTGTTCACCTTTTTTACTGGTTCTAAAAATCTCAGTTACTTAGTGTTTCTGACTGATTTATTACAATCAGTAATTTCTGATTTTCATAACACAGATTGGCAACAGTTACATCTGTAAGAAGGTCGGTACATGTAACAAGGTCCGTACATATGACTTGTATGCACTAACTTGAGGGGGAGTGTCAAAATTGGAATATGAACAAGAATATAAATAGTATATGGAACTCTAATTGGATAAGGATTGCAATGTAGTGTCTATAAATAGGACATAGTGCAATAATGTAGAGACATAATTCAATAGTATATTTCTATTATATTTCTCATAGACACCTTTACTTGAGAGGCCTGAGCATGCATGCTTGTTCACTTTTAGTCAATATGCTAATTTCAGTTGATATCTTCTTAACATTGAGGTGAATGATCGTAGTTTTGCTTTGAGTTTAGTTTGATGAATGTCAGCTTATAATATTTCTACCGGGAACATGCTTTTACAGGAGAATTCCTCCAACATTGGCAAATTTATCAAAATTGGATGTGTTGATCAAGGATGGATGTGGGACTGCTACCGCACAAGTCAAAATACTAAATTCGGTAATTTATCTTTGTCAGGAAATTTGATATGTACATCCCATGCTCTAATATTCAGAAAATGATCTTCCTCTTCTAGTTATAGAATTGGAAATAAAACAATACTATTGTTTATGTTTTCTACAAACAAACGTCTTTGGGTTCGCAAACTAGTCATGCAGGGCAGTAACATAGGGATCGTTATGCGGTGAGTCATAGTGTAGTGATTTACTCACAGTGAGTAATAATCTATGGACTGTTCTACAATGAATAATATACAAGGATTGTCTACTTCAACAGCAGTTTTATGATCCCTAGATACTTTTTATCCAGGTATTGGTAATACAGTATTGTCATTCTACGATCTCTCCTCCATGAGATTATGTATAGTTTTCTGCATAAATTTGCCGCATTTGTATTTTTTTTTGATAACCAAATTTTTCGTTTTTGTATTTAAAAGTGCAACCTGAATTCTGCCTTAGTTATGTAGAGTTTGTACTTTGTACCGGAAACTACACATTATATTAGTTATTATGCAGAGATTATATTAATAACAGAGTTATGTGTTGCAAATCACTGTAATATTAGTTACGAGAAATTGAGATTATTACTCTTAGTTGGTCAATCAAATGCCCATGATGTGATATAACTGGTCAGCACCATATATCTTGCTTTCTTCCTCCTTTAATGCCTCACATCTGCTTGATAATTCGTACGCCAAGAGACACATTGATGGCAAGTGATGTTTTGGTCATGTTACCTAGAAAAATAGGTAGGACGAGATAACAAGCGCTAGATGTATAGCTCTATACTTTGACATTATTACAATACCAACTTATTGAAACATACGAAAACAGCTTAATAACAGAAACTTAGTAATTGAGGCCATTAACTTGCTGACAAGGTGGTAACAGTTTTACATTTACGTGTCACTTTTTAAAATCCTTATTTTGTATGACTATGTCTGTTTGGTATCTTGAATATCCTTTTGCAGCAGAAAGTAAAGCTAAGCGGAATAAAGCTGGAAGTGAATGATATAGGAAAATCTTAGCTTTACTGACTAGGGGATTAGGTACACAAACAAGATACATGCTTATTCTATCTCCAAATTTCCAGAAGTCTCTGTTCTTCAGTGTTTAGTTCACCTGTTCTCAGACTTTATTTAAGTTAAGAATTTTATGAATTTTGTGTAGCTAAAGATTTCCACAGCTAATGAGGTATCAAGAAGCTGCAATAGCAGTATTGCAATTCAAAACACAACAACAACAACAACATACCTAGTGAAATCCCACAAATTGAGGTTGTAGAGGGTAAAGTGTATGTAGACCTTATCCATACCTCGTGGCGGTAGAGATACTATTCCCGGGAGACCCTCGATTCAAGTGAAGCAGAATAAAGTAGTAATGAAAAGGAGAAACAACATTGAAGAAAACATGTCAACTAATAGGAAAGGAGTGCAGAGCATAAACATTAACAAAATAGTGCAATCACCTAAACATAATAAACAACAGATTGTAACAGATAACAAAAGCAAGAAACTACATGTATAAGAGTATTTATTGTGACAAACATGGTGCGCCAGAGTCCAGACTACTACCAAACCTAATCTCGTCAAAAATCAAGAAAACCCTCGACTACCTACTAACCTTCTACCCTAATCCATGACCTCCATACCTGCCTATCTAAGGTCGTGTCTTTAGTAAGCTAAAGTTGTAGCATGTCCTGTATAATCGCAATCTACCTAATACTTCTTCAGCCTACCTCTACCTCTCCTCATATCCACTATATCCAACCTCTCGCACCTTCCTTCACTAGGGCATCGACACATCTCTTCTTCAAATGTCCAAACCATCTTGGTCTTCCTTCCTCATCTTGTCCACCACAGAGGTCACTCTCACCTCTTCCCAGATACCCTCATTCTTAATCTTATCACTCCTAGTATGCCCACACTTAAATGTTATTTTAGTTACAAGCTCAAATTCTAGACTTGCATACAGTTCCCAAAAGAAAAGAAAAGAAATTCAACATCAATAGTACCGGATATTATCATATCATATTATATTATAAGTGGAAGCTCCAAGATGTAAAGTTGAATTACCATTTTATCCCTATACTAAATAAAAATGTTATATTCATATTTGATTATTTTGTTTTTGAAAAATATTGAGCAGTAAACGTTTTTTACTATTAATGAATTGAGAATATTTGAACAGTTATGAAAATTAAATAATCTAAACGTTAAAGAAAATGAAGAGACAAATGTTAGTTAATGAGAGCAAATAGGTAGAGATTTAAGTTGCACATTAACTAAAATATAGAAGCAGTTACCTTTACATTGCTAGAATCTTAAAAGTTGTAAATTTCAATACAATGAATCTCATAGTTAATTTATTAATATATGTTATTTTCAATGATAAATACATGAAAAGAAGCTAAAGAGACTAATTAATCATTTAAAGTGAAAGTATTATATAAAGCCAAGAATAGTTTTCATTTTCCTCAAGTTCCCTCTCCATTTTTATGGGCTCTAAAGAAGAGTATATCATTTCTCTGAGCAGTATTTTCTCAATCAATGTCAAAGTTAAAGGCTATTAAAATACGCTATGAGAGTTGTTGGATTTGTGCAAGAATTTCAGCTATGAATGTTGTTGGATTCATCAAAGAAATTTCTTAGTGAAGAATGCACTTATGACACTTATTATTTAATTTCCTTGTTAGGGCTTAATATATGCAACACACAACATTAATTTTACGGTAAAAGATTTCTATATGTTACTGATTTTACACATTTCATTAACGTAGCACATAAAATTTCACTTATTCAATTAAATATTGTAGTTGTATAGTTTTTTGGATTTTGGATCTTAGAAACAAAAACACCAGGATGCTTATCAATTTTAAGAACATGTAATTTGTATTTTCTATTTTATAACACATAATATAACTAAAAAATATTGCTAATCTACAATCTTCACAAAAATATTTTTTATGTATATGGCCACATGCACGTGGCGCGTACCCAGAAACTAGTTAACATAAGGAGGAGAAGATGAACAAAGTGTTAGGTCTTGATAAGCTATAAATAAAAAGCTTATGATGGTGTTAACAATGCTAGCTTGATCCACCTCGACTATTTCACCAGGAACCTACTACCTCCAACCAGCAGGTATCTGGTACTTCCTGCTCACCAAGGTTTAGACAAATAGAAAGAAAGCACCTCACTATTAAAAACTCAAAATGAGAAGTGTTTAAATAAGTTAGGGTCAACATTACTTAATATTCTTATTTTGATGAGGCAAAAGTGAATTGGGGCCTGTTCATGTGTTGATTCTTGATTTGCACTCAGTTTGAAACTTAAGAGGCTCATGCTCAGTTGCCTCATTATCACTTAGGCCTTGACCCCTGCTTCTTCAGGCTGGTAATTAGCTCTAGGCTGGTCAATATCAGTTGAGTTGTATTCTTCATATTGAGTCTTACACAAGGACTCAAGGTGTTGCATCTTTCAATTTATCGGTTGAGGTTTTTGTGAAATGTTAATGATATTATTAGTATATCTGATCATATGTATCTGAAGAGGTGAAATACTTTTTTGTGAAATGCAGATTGAGAATAAATTTATCATCTCCACCAAGTATAGTGTTGAAGGGCCTCTTCGTATGAAAGAAGAGTATGTTGAAGGGGAATTTGAATCTCCAAAAGTCGATGAGGAAGCTGTACCTGAACAACTAAGAGGTGCTTTTGGCCAGGCATTTAATACTCTGCAACAACTTCCTGTCCCCATTAGAGATGCTGTGTCCAGTGGCATGAAAGTTTCTCTAAGTAAGATTTAAGTATTTTCAATATACTCTATGCATATATGTATCTATGGTGTACAAGTGTTGTTGAAGTATTGCGATCTGGGGAGGGTAGAGTCTACGGAGACCATGCCCCTACCTCAAAGGTAGAGAGATTATTTTCGATAGACCCTCCGCTCAATAAAAGAATGACAGATAGCAATGGAAGTACAAGAACCAACAGATTGTAACAAAAATAATAGATAATAAAAGAATAATACTAAAAAAAATAATATGACAGAAAAAGTACAAAAGTAAAATATCTCAATAACCTAAATTATCGTTAAGAAATTCAAATTTAAATCAAGTAGACTACTGCTGCAACTAACCTGTTCATTGTTCAAATTGGCAGTAACAGAAGTAATTTTTAACACACTTTAAATGTCTGTCAATTCTGTTTGAAGCCTCTCAATCATGTCAAATCTTCAAATGTTTAAATCTAGCGTTGGTAAAAGCAGTTCGAAGTTAATTTTCTGCCTGATCTGTCCTTTAAGCAAGATTTGTTTTTGGTTATTTTGATTCTTTGATCTTATTCAAGCTTATATTCTCATTTGCATCAGCATCTGCCTTTTGAAAAATTCGTTTGTACTTCAGCACATTAATGTTGCTTGAACTGCCATATTACGTATATTTTGGTTACTAATGCTTTTTTCAAAGGCTTCTTATTTTTAGTTCCTAGGACATATCCTAATCTTTTAAAAAACAAAGAATAAACTAAAGTAGATAAGAAAGATAGAAGCTTGAAGAAAATAACTTTTGTAGATAAATGATATTGTTACTGTTTAGGATTTATTTATATTGCTTCTCACTCTGGGCTGTTACAATATCAGGCGGGACCTTTCAGAGACTTATTCTGATTTCCTACCTTGATGACGAGATCCTGGTGAGTCCTCTCGCTGCATTCTTTTTCTTTGTAGCACCATTACTTGATTTTTTTTCATACACCGTTTGTATATAGCACCACAATATCTTCACACAAGTTCTGGAAATTGTTTTAAGTAACCTTTTAGCTTTCACTAGATTCATATTGGGATTAACTTTTATAACAGAGATTTTTTGAACTTCATATATCTAGACACTATTATAACATCAAGGAAAATTGGTTTTGATTCTAATTATGCAGAAGTTGTAAGTTCTTATCTATAGAGCTGAGTTGTTGTGCCTTCGAATGCTCGTAAAGAACTATGAATCAAGCATTGCTGCTATTACAAGATCAAAAGTTAGTTCGACAATTGAACCTCAATTTTTTTAACATACTCTACTAATCTGCTGGTTGGGTGCAGATCATAAGGAATACTGCAGGAGAACCTG</genome_strand>
        <mrna_strand>CATTTTCTTGCCGGCGTACGACCTATACATCTCCTTGTACACCTATCGCCATTTTCCGAGGAGGGAGAAGAAGAAATGCAAGAAAGATGTTGAGGGTCTGTAGAGCTATGGTTGAGAAGACAGTACAAGGGGCTTCTTCTACTTTTGCTAAGGAAATGGAAAGGCTTTCAGCTAAAGAGTCTCTGCTTCTTGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAAAGATGCTGGTGGATTTGAAGCATTGGTCACTGGGAAGACAACAGATGTACAATGCATTGATGTGAATGAGAGGATTATTAGTCTCGAGAAGCTCAATCCGACGCCTCGTCCCTCAAC..............................................................................GTCTCCCAATTTGGAAGGACGATGGAATTTTGAGTGGTTTGGAGCTGGTAGCCCAGTTCTTCTTCTTGCCAAAATATTTTTTGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................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...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGAGAATAAATTTATCATCTCCACCAAGTATAGTGTTGAAGGGCCTCTTCGTATGANAGAAGAGTATGTTGAAGGGGAATTTGAATCTCCNAAAGTCGATGAGGAAGCTGTACCTGAACAACTAAGA-G-.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGGACCTTTCAGAGACTTATTCTGATTTCCTACCTTGATGACGAGATCCTG................................................................................................................................................................................................................................................................................................................................................................................................................ATCATAAGGAATACTGCAGGAGAACCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E719640" ref_strand="+" ref_description="SGN-E719640 [FC08BG10]">
      <seq>gggcgattggcggccaatcggccgaattgacaaccacattctaatccttacttcacttcaaaatttggtaccaccattttcttgccggcgtacaacctatacatctccttgtacacctatcgccattttccgaggagggagaagaataaatgcaagaaagatgttgagggtctgtagagctatggttgagaagacagtacaaggggcttcttctacttttgctaaggaaatggaaaggctttcagctaaagagtctctgcttcttgcattcaaagatgctggtggatttgaagcattggtcactgggaagacaacagatgtacaatgcattgatgtgaatgagaggattattagtctcgagaagctcaatccgacgcctcgtccctcaacgtctcccaatttggaaggacgatggaattttgagtggtttggagctggtagcccagttcttcttcttgccaaaatattttttgggagaattcctccaacattggcaaatttatcaaaattggatgtgttgatcaaggatggatgtgggactgctaccgcacaagtcaaaatactaaattcgattgagaataaatttatcatctccaccaagtatagtgttgaagggcctcttcgtatgaaagaagagtatgttgaaggggaatttgaatctccaaaagtcgatgaggaagctgtacctgaacaactaagaggtgcttttggccaggcatttaatactctgcaacaacttcctgtccccattagagatgctgtgtccagtggcatgaaagtttctctaagcgggacctttcagagacttattctgatttcctaccttgatgacgagatcctgatcataaggaatact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C03HBa0013A17.1" temp_strand="-" temp_description="C03HBa0013A17.1  AC238559.1 htgs_phase:2 submitted_to_sgn_as:gi|261249975|gb|AC238559.1| upload_account_name:jianfeng-ren Solanum lycopersicum chromosome 3 clone C03HBa0013a17, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces">
        <position start="22632" stop="8411"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22352" g_stop="22113" g_length="240"/>
          <reference_exon_boundary r_type="cDNA" r_start="29" r_stop="268" r_length="240" r_score="0.975"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="22112" i_stop="19780" i_length="2333">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19779" g_stop="19658" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="269" r_stop="390" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19657" i_stop="19580" i_length="78">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19579" g_stop="19496" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="391" r_stop="474" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19495" i_stop="13504" i_length="5992">
            <donor d_prob="0.912" d_score="1.00"/>
            <acceptor a_prob="0.950" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="13503" g_stop="13407" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="475" r_stop="571" r_length="97" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="13406" i_stop="9829" i_length="3578">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="9828" g_stop="9612" g_length="217"/>
          <reference_exon_boundary r_type="cDNA" r_start="572" r_stop="788" r_length="217" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="9611" i_stop="8768" i_length="844">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="8767" g_stop="8715" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="789" r_stop="841" r_length="53" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C03HBa0013A17.1" gen_strand="-" ref_id="SGN-E719640" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>813</cumulative_length_of_scored_exons>
        <coverage percentage="0.950" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C03HBa0013A17.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E719640" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22352" e_stop="22113"/>
          <exon e_start="19779" e_stop="19658"/>
          <exon e_start="19579" e_stop="19496"/>
          <exon e_start="13503" e_stop="13407"/>
          <exon e_start="9828" e_stop="9612"/>
          <exon e_start="8767" e_stop="8715"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACAACCACATTCTAATGGCTACTTCACTTCAAAATTTGGTACCACCATTTTCTTGCCGGCGTACGACCTATACATCTCCTTGTACACCTATCGCCATTTTCCGAGGAGGGAGAAGAAGAAATGCAAGAAAGATGTTGAGGGTCTGTAGAGCTATGGTTGAGAAGACAGTACAAGGGGCTTCTTCTACTTTTGCTAAGGAAATGGAAAGGCTTTCAGCTAAAGAGTCTCTGCTTCTTGCAGTTAGTGCTTATCCCTTTTTACTCCAATTTATTTGTTTTTTCCTATTTAAGTTTAAGTAACTCATTAAAATTGTGGAAAATTTGAGGGGAGTGTTAAGAGTGTCTCGCATTAGTTATGTGAATGATTTGTTGTCTTCTAATATGTTTTTGGGAAAGGCATTTCTCACCTCGCCAGCTAAATTTTTGTGTTGAAGGTCTATATTATTAACAATAGTTATGTTTATGTTTGTGTTGCTTGTTTTAATTTAAGAGTAGTTTGTAAATCCAACTTGTACTAGGTAATCATAGGTATCTATTGGGATACTCATGGACATTCTCTCTGCCACTTGTAGATTATTGTCATGTCTACTTCTTATTTAATGGCCCATTCTATTTAATAGACTTAAATGATAGAATTCACAGCAGTACATAAACAAAAGGCAATATGACCCTTAACTTGGCGATAGCGGACAATTATGAACGTCTATTATGGATGTGTACAAGTAAGCACTTAAACTTGTATAAAATTGAATAAATAGACACAATCGTCCTACATGACAATTTTGTGTCCTGTATGGCGTCCTATGTGTATTGTCCGCTGGAGCCAAGTTTAGGGTCAACTCTATGTATTATGCCTAAACAAAATAACTAAAAGAAAAATCAAGAACGGTGGTGTAGACTGACAGCAGAGATCTATTCTCTTTGTTTCATTTTACTTGACACTTTCTTTTTTAGTATGTTAAAAAGAATGACATCTTTCTATTTTTATGGAGAATTGTCATTCATGACAAGTATGGTCAAGATGACCAGTGATGTCCAAAGGTGGTTGTGAGCCCCCATGGTGTAGGAGTTTGGAAAGCAATCAGATCCCTTTGGTCTTTGATGGCTGGAAAAATTAGTTTAAGAGTGGGCAATGGAAGGAAAATTGTTCTTTTGGGGTGATAATTGACTGGGGCATGGACCTCTAAGGGAAGTCTTCCCTGAATTCTTTAGCATTGCCACTATGCCGAACATTAATTTGGAATCAGCAAAAAGAGTACAGGGATGGAATTTACTGTTAGAAGGCTACTGCATGATTGGGAGCTGGAAAGAGTTGTTGAATTTTTCCAGACCTTGAAATCATTCTAAGGGTTCAAAGATATTGAAGACTCACTTATATGGAAGCCTACCGGTATATGACCTAATTCTGTTAACTTAGCTTATAGCATTCTGATTAGGCACAGACAGTCAACTAATTAGAGTCCATGGAGATCCATTTGGAAGATGAAGGCTCCTTTTTAGGTGGTATGCTTTTCTTGGTTAGTAGCAACAAATGCTTGCCTCACACAGGATAAAGTATAAACTTCAAAAAAGGGGATTCCAACTGTGTTCTAGATGCTTTTTGTGCGGAGCTGCTAGGGAAAATAATAGTAACCTATTCATTCATTGTCCTGTTACTGGACAATTAAGACAACTATTCTTGAACATGTTAGGAATCAGATGATCAGTGCCAACAAGTGTTAATCTACTGAGATGTTGGAACCAGAATGATGGGGCAGTTAGTCAGAAAAATTGGTGGAAACTTGTCCCTGCTTGCGTATGGTTAGATCATTTAGAAGGAGCGGAACTATAGAGCTTTTGAAAGAAAAATACAATTTTGTGGCGATAATCAAGATGAACTGTATACTTTTGTTTTGTTTTTGGTGTAAAGAAATCTATGCTAAGGAGGCTGAATTACTAGTTGATATGATAGAATCCTTGTGAAGCAGTAGCCTAAGCTAAGCTTGGTTGGGATCTTGTTGTGTCTTTTGCACTGTCATCGTGCAACTTATATATATATATATATATATATATAGTTGTTGCCAGTTTCAAAGAACACACACATTTAACTTTAAACTTCTCATTTACCCTAAATAACATGATTTTGTAGGTACATAAATGTCATGACATGCTTAAGGCCACATGTTTGATAACTCTTTTTTCTTTTATAAATTTCATGTACAGTTTCACATAAAATAAGGTGGGTATTATATGTACTCTTGTCTCTTTACTTTTTTTCCTGCAATTCATAATTTTCCTTTGTTTAAATTCTTTCATTGTTTCTCTATGATTGACTCATCAAAGAATTGGCCTTGGGTAAAGTGAACGTTCTAATATATCCCATTTCCATTTGAGAAAAGGCTCAGGGAATGGTGGAAAGAGTGTCACAGGAGATACAAAGTTGTCAGGTCTGCAGGAGGGTTAACTTGGTGGAACCGAGAGGTTTAGAGAACAATATTATTGATAATATTGCAATGGTTATTTTCATGAAATTGCACTTCTGTTCTTTCTTTCTGTCCCTTAAGCACTAAAAGAAATTAATTACACTGTTATAGTTCAAAGATGCTGGTGGATTTGAAGCATTGGTCACTGGGAAGACAACAGATGTACAATGCATTGATGTGAATGAGAGGATTATTAGTCTCGAGAAGCTCAATCCGACGCCTCGTCCCTCAACGTAAGGTGTTAAATCTTACCAATAAACTTAATTTTCAAGATTCTTGACAAGGTACTCATTGGTGGTTTCATTTCCCAGGTCTCCCAATTTGGAAGGACGATGGAATTTTGAGTGGTTTGGAGCTGGTAGCCCAGTTCTTCTTCTTGCCAAAATATTTTTTGGGTAACTTCTATTTTTTGGGATAACATTCACTTCTATTTTTCCTATTCCAACTTAAACTCATTAGTGTATGAACTACGTATACGAAATGAAGTACTTGTGCAAATAATGAATCAATTCTACATGAAGTAGTTTATTCTTTTTCTGCAACCTGCATTGTGCTACTAATAAATAATTGTCATACTAGAGATCAAATGGAGACCATGTCTTCAAGGCTAACAATTTAGAGAAGAAAGTTTGAACCATGGGTATGATGGTTGCCTTCCACTATCTAAAGTGCATGCTAAATGTTTAAGCATCTAATCATTCCCTTCCATACCTTTGCACCAGTGGCAAATTAAGTGATAGTTGAGTGGGGAAATTGCACCTACTTAAATTTGATAAAATTACGCTATATACCAAAGCTTTTGCTTAGAATTTCAAATCATTCCATTTTGAACCTGATAATTTCCTAGAAAAAGTGAGAAATTGGTAGAATATTTTTATCTGAGGCTGAAATTTGATAAAATTACGCTATATGCCAGAACTTTTGCTTAGAACTTTGACTCTTTTCCATCTTTGAACCTGATAATTTCCTAGAAGAAGTCATATTGGTAGGATAGTTTTATCTGAGGTGTCTTGCATAAGGGAAAAAGTAAAATGCTAAAAGAAATGCTTTTAGCTTCTTTCATCCAACTAAAGGGCCTTCCGTTTATCTTTTCATTTTCTCTCTTTCATTTCTGATGACACAATATTTGAATTACTTTATTTTCTTACGTGCACTTGCTTTTAAGCTTAGAAGTCACAGCTAGCCCACAAAGTTGCTTGTCAGGGCCACTTTATAAAATCAACAAAATTGCTTGTCAGCTATCTTCTGGCTATATAAAATAAAAATAAAATTTATGATTTGTTTTGTGTGAATGTACTATGTATAGTTAGAAAGTTAGCCAAGATGGGTTGATATATTCATATTACTTGTATTAGTGGGAAGGTGTGTACCCAGTGAAACAGTTGAGATACGTGCAAGCTTGTTCAGATACTATGGTTATTCTCCCAAAGAATAAGAAACCCCACAAAGTGATGAGATGAATCACTCTTTTAGTCCACCAAACTAGATAAAGGTAAAGAAATAATCTTTGCTCTCACTGGGAAAAAATTCTGATTGGGAAGAAAAGGTATGGGAATAAGAAAAGAGGTCCAACCTTTTTAAGGAATGCAACCGATTTTATGACATTGAATTTTGAAATTTGGCGAAAGACCAAACTAAACCTCCATTCATGGAGGCCAATTGTTTCCCTTCAGTTAGGTCTTTACTATTTAAGTACATTATTGTCTACTAGGTATTTGCATGATTTTTCTTTTGAAGGAAAGACAACATTTACCATAATTGGTTGAAATTTCCTTCCCAAAAATTGAAAGTAAAGATCTTTCATATTTAGTTAATCTTTTTCACGGAGAAAATAATTTTGGACCTCTATAGATTGTGGTTATTTCCTTCTCACTTGGTAGCATCCACAATGCAACTATTAAAGGGGGGGGGGGGGGGTTACAGAGTTTTGGGGAGAATTTGTGAAATACAAGTTTCTATTTTGAAACTAGTAATGTTGTATTCCTCAACATTAAGGACATGTTGGAAACCTTCGAAAAAGAGAAAACAGTAATTAAAAGTATTCCCTACAAAAGTCCTAACAAATCTACAAGCTGCTTTGATCCTCTATACCTTTCCATTTGACTTTCTGAATGAAATTGTACCTATCTCCAGAGTATATACTATCCCTCTCACTCCAAGTAGTCCACTTGATGCAATGTAGAATTATCCTCCACCATTTCTTCTGGCTCTTGTTACCTCCTCTTCTGATCCAACAACTCAAAAATCTACAACATGCGTAGGAATGGTCCACTTTGTCTTTGTGAGACTGAAGAAGATTGTCCATCGTCCATCTCTTTTGTATATGTGCAGTGCAAAATAGGTCTCTGTCTGCTTCTGCATAGTATGTATCTGGATACAATATTTAACCCCCTTCTCTTCAAAACTTCATGTTGTCAAGCAATATCTCCTAGCTACCAACCATGTAAAGCATTTTACCTTCGTTGATGCTAGGTTTTTCCAAATATTCCTCCATACTTTTTGACGGTCTCTAACTTGCTGAACATTTCTTTTTTATAAGCCCTGTTTACTGTTAATACCCCCTCCTAACTGTGTTCCACCTCAAAAATGTCAGAGTCAGAAGTGGTACCTTTGAAATCCTCTATCCCTTTTAGAAAATTGGCACTCTATCCACCTTCCAGTCATTCAATAACTTGCTAAAGGATAAGTTCCATCCTTGTGGAGTCCAACATTTATTCATAGGAGCCTCAAGCGTTGTTCTGGAGAGCAAGAAGCGGAAAAAAGCGAAGAGCGCTTGCTTCACTGAAGCTGAAGCAAAGCACACATTTTTTTCTACTAAAGTGTTGTTCAGAACAAAAACAAAAAATAGTAATATGCATATATAAATAACCAAGAACTCAATAGATATAACATATTAAGCAAATCTTTCAGTTCTTAAATTAGAAAGCTTATAAAAGATGGTCAATAATCCTCATAATCATAACATATTAAGCAACTCGTAATCATAACATATTAAGCAAATGCAACATCAAAACCAAATAAGTAAATAGACAGAGCATAACAGGGGAAAGAAAACCCTAGAAGTAGTTCCTGAAAGCCTGAAAGAGAGTCCAGAGAAGACGAAGAAAAGAGATTAAGAGAGGAAGAACTTATCTTTTTGAGTCGCAGCAACAGATGTTGAAATGTTTGAGTCACAGAAGAAGAAGAAGAAGAGCGAAATGTTTAAGTCACAGCAGGCAAGTGTGTTATACAGAAGGAAAAAAAACCTAACAGCACTTAAGCACGCTTTTTGTCATCTTTGCTTTAAGCGCGCTTCAAGCTTCGCCTACTGAAGCACTCATTTTTTTAGCAGCGCCTCGCTTCAGACCATATAAGCGCAGTGCTTGCACCTCGCCTCGTTTCGCGCTTTAAGCGCGCTTTTTGTCGCTTTTCACAACACCCTAAGGATTATTTAAGGAGAAGTTCTATCTTTGTGGAGTCCAACATTAATTCATAGTAGCCTCGGGATTATTGCACAAGACAAACAGATCAGGAAAGTATTCCTTTAGAGGAGTCTGTTCATTCCAAGCATCCCTCCAAAATTTATTGTTCTATCATCTCCCACTTTAACTAACATGTTCACTTCTAACTTGGGCCACAAAGCTCTGATAGTTCTCCATACCCCAACACTTCTTATCGCTGCACCAAGGGCTGGACTCACCAAATTTGCATTTAACAACATCCTTCCATAAGGCTTGCCCTTGTCTTTTGTATCTCCATAGCCACTTCAACAGTTCCTGATGCCCAAAGCCCCCAAATCTTTGCTAAGTTTAACCAAACTAGTATTGGGAACGTACGATGCACGTTTGTCCCCTACAACTGCAAAAAATTTGGACATCGAGTGAAAGATTTATGGTGCTTTCAAAATAGAAACAATTCAATCACAATAAGTTAACTAAGATACATAGAGCCTTACAGCACGCCTCACGGGAAACCAAAGCTTGAAAACAATTTCAGGAATTAAATATGGAGAAACAAAAACTGACCTGAAAAATGCCTCTCCTACTTTCTAGGTGAGAGAGTACCCTCTGTTCGGTAGGTCACCACCAACCTCATCCTTCTCCTCAGCTATCTCCGTCTGTGATAGCTTTCTCCTTCCCTTACAGCAGTTCCCTTCCACAGACATGGAGGAAAATAGGATTTATTTCCACACCGGTTTCAAGTCATTCAATAATATCAGATGGATATCTGGGGAGGAAGCCTAGTTTGATTGGGTGGAGCTTAGTATAAACTTGATGAGAAGAATAAATCTCAGCAAAAAAATGATGGAGTGGATTTGTTTTCTCCTGGAAGAAGCCTCAAACGACAATAAGAATCTTATGAGGAGATTGAGAATGAACTATGAAGGACCAAATGGCAGAGTATTTTAGTACAAGGAAGTTTAATGCCCGCGGAAGACTACTCTTGGAGGATTGAGGCCATGAGCGTATAATTGGATTTATAAAAGTTGATTGGGTAGGATCACCCTTTTATAGATTTTCTATATCCGGATATTGTGTTTAGGAGGTCATTTGGTGGCTTAGAAGAGTAAGTAACAAAGTGTGGTTGATCTAGTGCAAAAGCAGAATACTGAGCAATAGTCATAGCAAGTTGTGAGCTAATTTAGATTAAACAGTTGCTGAGAGAACAATGATAATTGAATGAAAGAAAAACCACTGGTAGGGATATGAATGGAGTCTCGCTCAGTTAAGAGAGTTGTAGGATTCGTAAAATAGGAAAAGAGCATCTCAAAGTATGGGGCAAATGGAACTTGTGTGTGATAGCCAAATGTCCCTTCATATCACATCAAATCTGGTATTTCATCGGAGGACGAAGCACATTGAGATTGACTCTCACTTTGTCAAAGAAAGATAATCTCGGAAGATACTGTTACAAAATTTGTAAAGTTGAGTGATTAGCTTGCAAATGTCTTCACCAAGTCCCTCACCGGTCCTCGTATTAGTTACTGTTGGATATGTAGCAAGAATTGATGGGAAATAGAGGAAAGAAGAGGAATTTGAAGAGGAAAGAAGAGGAATTTGAAAAGTTTAGAACTTGAAAGGTTGGGAACTTGAAAAGTCCTCTAATGCTTTAATGAAAAAGGCAATAGTCCCTCATCGGTAATGGAAATGAAAATAGGAGAGTTTAAATAAATAAACACTCCTATTAATTGTTAAAAGGGTTGTAAAAAGGGACCCCCCTCGCGCCGTCGTCGTCGCTCGCTTCGGCGTCGGCTACGGCTTTGGCAAATGATCGAGAGATAATTTTTTGGACAAATTTATTTTAATTATTTATTTAATTAATTTAATGGCCAAAAATTATTTTCAATTAATTAGTTGATAACAGAAGTTAACCGAAATGTTTTCAACTTTTTAGTTAACCCGACCCAACTCGGATCGCGCACGTGACCCGTTTTAAATTCCGTTATATTTAAAAATTTCCGTCATGACTGTTCTGAAAGGTTGCAACTTTCAGGAACAATCAATACCATTTGAAAGTTTGCAACCTTTCATTAATGGTCGTGTCAATTCTGAAAGGGTTGCAACCTTTCAGAATATATTCTTCTTGCCTATAAATACCATTCAGTCTTCAGAATATTTTCCTCCGAATTTTCTAGATCTTCCTTCTTCTTAAAAACACATATTTCTTCGTGTACTTTCCTGCTGTGGATTGATTCGCTGACAGTAGAGTTTTTGGTATCTATACTCTACTGATTAAGATCATTTTACCTTGGGAGGTTATATTCCAAATCAAACCTCGGATACTAGAGGGGAATAATTTCCTTAAGGGGACACTGTGAATTCAGTGGACTTGATTTTCTTCCTATATTATTAAAAAAAGTATTCCAGATTCTGGTAAGTTTTAAAGATTCAATTTTTTTTTTTACCAATAAATTTCTGTTCACCTTTTTTACTGGTTCTAAAAATCTCAGTTACTTAGTGTTTCTGACTGATTTATTACAATCAGTAATTTCTGATTTTCATAACACAGATTGGCAACAGTTACATCTGTAAGAAGGTCGGTACATGTAACAAGGTCCGTACATATGACTTGTATGCACTAACTTGAGGGGGAGTGTCAAAATTGGAATATGAACAAGAATATAAATAGTATATGGAACTCTAATTGGATAAGGATTGCAATGTAGTGTCTATAAATAGGACATAGTGCAATAATGTAGAGACATAATTCAATAGTATATTTCTATTATATTTCTCATAGACACCTTTACTTGAGAGGCCTGAGCATGCATGCTTGTTCACTTTTAGTCAATATGCTAATTTCAGTTGATATCTTCTTAACATTGAGGTGAATGATCGTAGTTTTGCTTTGAGTTTAGTTTGATGAATGTCAGCTTATAATATTTCTACCGGGAACATGCTTTTACAGGAGAATTCCTCCAACATTGGCAAATTTATCAAAATTGGATGTGTTGATCAAGGATGGATGTGGGACTGCTACCGCACAAGTCAAAATACTAAATTCGGTAATTTATCTTTGTCAGGAAATTTGATATGTACATCCCATGCTCTAATATTCAGAAAATGATCTTCCTCTTCTAGTTATAGAATTGGAAATAAAACAATACTATTGTTTATGTTTTCTACAAACAAACGTCTTTGGGTTCGCAAACTAGTCATGCAGGGCAGTAACATAGGGATCGTTATGCGGTGAGTCATAGTGTAGTGATTTACTCACAGTGAGTAATAATCTATGGACTGTTCTACAATGAATAATATACAAGGATTGTCTACTTCAACAGCAGTTTTATGATCCCTAGATACTTTTTATCCAGGTATTGGTAATACAGTATTGTCATTCTACGATCTCTCCTCCATGAGATTATGTATAGTTTTCTGCATAAATTTGCCGCATTTGTATTTTTTTTTGATAACCAAATTTTTCGTTTTTGTATTTAAAAGTGCAACCTGAATTCTGCCTTAGTTATGTAGAGTTTGTACTTTGTACCGGAAACTACACATTATATTAGTTATTATGCAGAGATTATATTAATAACAGAGTTATGTGTTGCAAATCACTGTAATATTAGTTACGAGAAATTGAGATTATTACTCTTAGTTGGTCAATCAAATGCCCATGATGTGATATAACTGGTCAGCACCATATATCTTGCTTTCTTCCTCCTTTAATGCCTCACATCTGCTTGATAATTCGTACGCCAAGAGACACATTGATGGCAAGTGATGTTTTGGTCATGTTACCTAGAAAAATAGGTAGGACGAGATAACAAGCGCTAGATGTATAGCTCTATACTTTGACATTATTACAATACCAACTTATTGAAACATACGAAAACAGCTTAATAACAGAAACTTAGTAATTGAGGCCATTAACTTGCTGACAAGGTGGTAACAGTTTTACATTTACGTGTCACTTTTTAAAATCCTTATTTTGTATGACTATGTCTGTTTGGTATCTTGAATATCCTTTTGCAGCAGAAAGTAAAGCTAAGCGGAATAAAGCTGGAAGTGAATGATATAGGAAAATCTTAGCTTTACTGACTAGGGGATTAGGTACACAAACAAGATACATGCTTATTCTATCTCCAAATTTCCAGAAGTCTCTGTTCTTCAGTGTTTAGTTCACCTGTTCTCAGACTTTATTTAAGTTAAGAATTTTATGAATTTTGTGTAGCTAAAGATTTCCACAGCTAATGAGGTATCAAGAAGCTGCAATAGCAGTATTGCAATTCAAAACACAACAACAACAACAACATACCTAGTGAAATCCCACAAATTGAGGTTGTAGAGGGTAAAGTGTATGTAGACCTTATCCATACCTCGTGGCGGTAGAGATACTATTCCCGGGAGACCCTCGATTCAAGTGAAGCAGAATAAAGTAGTAATGAAAAGGAGAAACAACATTGAAGAAAACATGTCAACTAATAGGAAAGGAGTGCAGAGCATAAACATTAACAAAATAGTGCAATCACCTAAACATAATAAACAACAGATTGTAACAGATAACAAAAGCAAGAAACTACATGTATAAGAGTATTTATTGTGACAAACATGGTGCGCCAGAGTCCAGACTACTACCAAACCTAATCTCGTCAAAAATCAAGAAAACCCTCGACTACCTACTAACCTTCTACCCTAATCCATGACCTCCATACCTGCCTATCTAAGGTCGTGTCTTTAGTAAGCTAAAGTTGTAGCATGTCCTGTATAATCGCAATCTACCTAATACTTCTTCAGCCTACCTCTACCTCTCCTCATATCCACTATATCCAACCTCTCGCACCTTCCTTCACTAGGGCATCGACACATCTCTTCTTCAAATGTCCAAACCATCTTGGTCTTCCTTCCTCATCTTGTCCACCACAGAGGTCACTCTCACCTCTTCCCAGATACCCTCATTCTTAATCTTATCACTCCTAGTATGCCCACACTTAAATGTTATTTTAGTTACAAGCTCAAATTCTAGACTTGCATACAGTTCCCAAAAGAAAAGAAAAGAAATTCAACATCAATAGTACCGGATATTATCATATCATATTATATTATAAGTGGAAGCTCCAAGATGTAAAGTTGAATTACCATTTTATCCCTATACTAAATAAAAATGTTATATTCATATTTGATTATTTTGTTTTTGAAAAATATTGAGCAGTAAACGTTTTTTACTATTAATGAATTGAGAATATTTGAACAGTTATGAAAATTAAATAATCTAAACGTTAAAGAAAATGAAGAGACAAATGTTAGTTAATGAGAGCAAATAGGTAGAGATTTAAGTTGCACATTAACTAAAATATAGAAGCAGTTACCTTTACATTGCTAGAATCTTAAAAGTTGTAAATTTCAATACAATGAATCTCATAGTTAATTTATTAATATATGTTATTTTCAATGATAAATACATGAAAAGAAGCTAAAGAGACTAATTAATCATTTAAAGTGAAAGTATTATATAAAGCCAAGAATAGTTTTCATTTTCCTCAAGTTCCCTCTCCATTTTTATGGGCTCTAAAGAAGAGTATATCATTTCTCTGAGCAGTATTTTCTCAATCAATGTCAAAGTTAAAGGCTATTAAAATACGCTATGAGAGTTGTTGGATTTGTGCAAGAATTTCAGCTATGAATGTTGTTGGATTCATCAAAGAAATTTCTTAGTGAAGAATGCACTTATGACACTTATTATTTAATTTCCTTGTTAGGGCTTAATATATGCAACACACAACATTAATTTTACGGTAAAAGATTTCTATATGTTACTGATTTTACACATTTCATTAACGTAGCACATAAAATTTCACTTATTCAATTAAATATTGTAGTTGTATAGTTTTTTGGATTTTGGATCTTAGAAACAAAAACACCAGGATGCTTATCAATTTTAAGAACATGTAATTTGTATTTTCTATTTTATAACACATAATATAACTAAAAAATATTGCTAATCTACAATCTTCACAAAAATATTTTTTATGTATATGGCCACATGCACGTGGCGCGTACCCAGAAACTAGTTAACATAAGGAGGAGAAGATGAACAAAGTGTTAGGTCTTGATAAGCTATAAATAAAAAGCTTATGATGGTGTTAACAATGCTAGCTTGATCCACCTCGACTATTTCACCAGGAACCTACTACCTCCAACCAGCAGGTATCTGGTACTTCCTGCTCACCAAGGTTTAGACAAATAGAAAGAAAGCACCTCACTATTAAAAACTCAAAATGAGAAGTGTTTAAATAAGTTAGGGTCAACATTACTTAATATTCTTATTTTGATGAGGCAAAAGTGAATTGGGGCCTGTTCATGTGTTGATTCTTGATTTGCACTCAGTTTGAAACTTAAGAGGCTCATGCTCAGTTGCCTCATTATCACTTAGGCCTTGACCCCTGCTTCTTCAGGCTGGTAATTAGCTCTAGGCTGGTCAATATCAGTTGAGTTGTATTCTTCATATTGAGTCTTACACAAGGACTCAAGGTGTTGCATCTTTCAATTTATCGGTTGAGGTTTTTGTGAAATGTTAATGATATTATTAGTATATCTGATCATATGTATCTGAAGAGGTGAAATACTTTTTTGTGAAATGCAGATTGAGAATAAATTTATCATCTCCACCAAGTATAGTGTTGAAGGGCCTCTTCGTATGAAAGAAGAGTATGTTGAAGGGGAATTTGAATCTCCAAAAGTCGATGAGGAAGCTGTACCTGAACAACTAAGAGGTGCTTTTGGCCAGGCATTTAATACTCTGCAACAACTTCCTGTCCCCATTAGAGATGCTGTGTCCAGTGGCATGAAAGTTTCTCTAAGTAAGATTTAAGTATTTTCAATATACTCTATGCATATATGTATCTATGGTGTACAAGTGTTGTTGAAGTATTGCGATCTGGGGAGGGTAGAGTCTACGGAGACCATGCCCCTACCTCAAAGGTAGAGAGATTATTTTCGATAGACCCTCCGCTCAATAAAAGAATGACAGATAGCAATGGAAGTACAAGAACCAACAGATTGTAACAAAAATAATAGATAATAAAAGAATAATACTAAAAAAAATAATATGACAGAAAAAGTACAAAAGTAAAATATCTCAATAACCTAAATTATCGTTAAGAAATTCAAATTTAAATCAAGTAGACTACTGCTGCAACTAACCTGTTCATTGTTCAAATTGGCAGTAACAGAAGTAATTTTTAACACACTTTAAATGTCTGTCAATTCTGTTTGAAGCCTCTCAATCATGTCAAATCTTCAAATGTTTAAATCTAGCGTTGGTAAAAGCAGTTCGAAGTTAATTTTCTGCCTGATCTGTCCTTTAAGCAAGATTTGTTTTTGGTTATTTTGATTCTTTGATCTTATTCAAGCTTATATTCTCATTTGCATCAGCATCTGCCTTTTGAAAAATTCGTTTGTACTTCAGCACATTAATGTTGCTTGAACTGCCATATTACGTATATTTTGGTTACTAATGCTTTTTTCAAAGGCTTCTTATTTTTAGTTCCTAGGACATATCCTAATCTTTTAAAAAACAAAGAATAAACTAAAGTAGATAAGAAAGATAGAAGCTTGAAGAAAATAACTTTTGTAGATAAATGATATTGTTACTGTTTAGGATTTATTTATATTGCTTCTCACTCTGGGCTGTTACAATATCAGGCGGGACCTTTCAGAGACTTATTCTGATTTCCTACCTTGATGACGAGATCCTG</genome_strand>
        <mrna_strand>GACAACCACATTCTAATCCTTACTTCACTTCAAAATTTGGTACCACCATTTTCTTGCCGGCGTACAACCTATACATCTCCTTGTACACCTATCGCCATTTTCCGAGGAGGGAGAAGAATAAATGCAAGAAAGATGTTGAGGGTCTGTAGAGCTATGGTTGAGAAGACAGTACAAGGGGCTTCTTCTACTTTTGCTAAGGAAATGGAAAGGCTTTCAGCTAAAGAGTCTCTGCTTCTTGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAAAGATGCTGGTGGATTTGAAGCATTGGTCACTGGGAAGACAACAGATGTACAATGCATTGATGTGAATGAGAGGATTATTAGTCTCGAGAAGCTCAATCCGACGCCTCGTCCCTCAAC..............................................................................GTCTCCCAATTTGGAAGGACGATGGAATTTTGAGTGGTTTGGAGCTGGTAGCCCAGTTCTTCTTCTTGCCAAAATATTTTTTGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................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.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGAGAATAAATTTATCATCTCCACCAAGTATAGTGTTGAAGGGCCTCTTCGTATGAAAGAAGAGTATGTTGAAGGGGAATTTGAATCTCCAAAAGTCGATGAGGAAGCTGTACCTGAACAACTAAGAGGTGCTTTTGGCCAGGCATTTAATACTCTGCAACAACTTCCTGTCCCCATTAGAGATGCTGTGTCCAGTGGCATGAAAGTTTCTCTAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGGACCTTTCAGAGACTTATTCTGATTTCCTACCTTGATGACGAGATCCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E257184" ref_strand="+" ref_description="SGN-E257184 [cLEG-46-N11]">
      <seq>tcacttcaaaatttggtaccaccattttcttgccggcgtacgacctatacatctccttgtacacctatcgccattttccgaggagggagaagaagaaatgcaagaaagatgttgagggtctgtagagctatggttgagaagacagtacaaggggcttcttctacttttgctaaggaaatggaaaggctttcagctaaagagtctctgcttcttgcattcaaagatgctggtggatttgaagcattggtcactgggaagacaacagatgtacaatgcattgatgtgaatgagaggattattagtctcgagaagctcaatccgacgcctcgtccctcaacgtctcccaatttggaaggacgatggaattttgagtggtttggagctggtagcccagttcttcttcttgccaaaatattttttgggagaattcctccaacattggcaaatttatcaaaattggatgtgttgatcaaggatggatgtgggactgctaccgcacaagtcaaaatactaaattcgattgagaataaatttatcatctccaccaagtatagtgttgaagggcctcttcgtatgaaagaagagtatgttgaaggggaatttgaatctccaaaagtcgatgaggaagctgtacctgaaccactaagaggtgcttttggccaggcatttaatactctgcaacaacttcctgtccccattagagatgctgtgtccagtggcatgaaagtttctctaagcgggacctttcagagacttattctgatttcctaccttgatgacgagatcctgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C03HBa0013A17.1" temp_strand="-" temp_description="C03HBa0013A17.1  AC238559.1 htgs_phase:2 submitted_to_sgn_as:gi|261249975|gb|AC238559.1| upload_account_name:jianfeng-ren Solanum lycopersicum chromosome 3 clone C03HBa0013a17, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces">
        <position start="22628" stop="8413"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22328" g_stop="22113" g_length="216"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="216" r_length="216" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="22112" i_stop="19780" i_length="2333">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19779" g_stop="19658" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="217" r_stop="338" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19657" i_stop="19580" i_length="78">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19579" g_stop="19496" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="339" r_stop="422" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19495" i_stop="13504" i_length="5992">
            <donor d_prob="0.912" d_score="1.00"/>
            <acceptor a_prob="0.950" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="13503" g_stop="13407" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="423" r_stop="519" r_length="97" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="13406" i_stop="9829" i_length="3578">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="9828" g_stop="9612" g_length="217"/>
          <reference_exon_boundary r_type="cDNA" r_start="520" r_stop="736" r_length="217" r_score="0.995"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="9611" i_stop="8768" i_length="844">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="8767" g_stop="8715" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="737" r_stop="789" r_length="53" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C03HBa0013A17.1" gen_strand="-" ref_id="SGN-E257184" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>789</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C03HBa0013A17.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E257184" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22328" e_stop="22113"/>
          <exon e_start="19779" e_stop="19658"/>
          <exon e_start="19579" e_stop="19496"/>
          <exon e_start="13503" e_stop="13407"/>
          <exon e_start="9828" e_stop="9612"/>
          <exon e_start="8767" e_stop="8715"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCACTTCAAAATTTGGTACCACCATTTTCTTGCCGGCGTACGACCTATACATCTCCTTGTACACCTATCGCCATTTTCCGAGGAGGGAGAAGAAGAAATGCAAGAAAGATGTTGAGGGTCTGTAGAGCTATGGTTGAGAAGACAGTACAAGGGGCTTCTTCTACTTTTGCTAAGGAAATGGAAAGGCTTTCAGCTAAAGAGTCTCTGCTTCTTGCAGTTAGTGCTTATCCCTTTTTACTCCAATTTATTTGTTTTTTCCTATTTAAGTTTAAGTAACTCATTAAAATTGTGGAAAATTTGAGGGGAGTGTTAAGAGTGTCTCGCATTAGTTATGTGAATGATTTGTTGTCTTCTAATATGTTTTTGGGAAAGGCATTTCTCACCTCGCCAGCTAAATTTTTGTGTTGAAGGTCTATATTATTAACAATAGTTATGTTTATGTTTGTGTTGCTTGTTTTAATTTAAGAGTAGTTTGTAAATCCAACTTGTACTAGGTAATCATAGGTATCTATTGGGATACTCATGGACATTCTCTCTGCCACTTGTAGATTATTGTCATGTCTACTTCTTATTTAATGGCCCATTCTATTTAATAGACTTAAATGATAGAATTCACAGCAGTACATAAACAAAAGGCAATATGACCCTTAACTTGGCGATAGCGGACAATTATGAACGTCTATTATGGATGTGTACAAGTAAGCACTTAAACTTGTATAAAATTGAATAAATAGACACAATCGTCCTACATGACAATTTTGTGTCCTGTATGGCGTCCTATGTGTATTGTCCGCTGGAGCCAAGTTTAGGGTCAACTCTATGTATTATGCCTAAACAAAATAACTAAAAGAAAAATCAAGAACGGTGGTGTAGACTGACAGCAGAGATCTATTCTCTTTGTTTCATTTTACTTGACACTTTCTTTTTTAGTATGTTAAAAAGAATGACATCTTTCTATTTTTATGGAGAATTGTCATTCATGACAAGTATGGTCAAGATGACCAGTGATGTCCAAAGGTGGTTGTGAGCCCCCATGGTGTAGGAGTTTGGAAAGCAATCAGATCCCTTTGGTCTTTGATGGCTGGAAAAATTAGTTTAAGAGTGGGCAATGGAAGGAAAATTGTTCTTTTGGGGTGATAATTGACTGGGGCATGGACCTCTAAGGGAAGTCTTCCCTGAATTCTTTAGCATTGCCACTATGCCGAACATTAATTTGGAATCAGCAAAAAGAGTACAGGGATGGAATTTACTGTTAGAAGGCTACTGCATGATTGGGAGCTGGAAAGAGTTGTTGAATTTTTCCAGACCTTGAAATCATTCTAAGGGTTCAAAGATATTGAAGACTCACTTATATGGAAGCCTACCGGTATATGACCTAATTCTGTTAACTTAGCTTATAGCATTCTGATTAGGCACAGACAGTCAACTAATTAGAGTCCATGGAGATCCATTTGGAAGATGAAGGCTCCTTTTTAGGTGGTATGCTTTTCTTGGTTAGTAGCAACAAATGCTTGCCTCACACAGGATAAAGTATAAACTTCAAAAAAGGGGATTCCAACTGTGTTCTAGATGCTTTTTGTGCGGAGCTGCTAGGGAAAATAATAGTAACCTATTCATTCATTGTCCTGTTACTGGACAATTAAGACAACTATTCTTGAACATGTTAGGAATCAGATGATCAGTGCCAACAAGTGTTAATCTACTGAGATGTTGGAACCAGAATGATGGGGCAGTTAGTCAGAAAAATTGGTGGAAACTTGTCCCTGCTTGCGTATGGTTAGATCATTTAGAAGGAGCGGAACTATAGAGCTTTTGAAAGAAAAATACAATTTTGTGGCGATAATCAAGATGAACTGTATACTTTTGTTTTGTTTTTGGTGTAAAGAAATCTATGCTAAGGAGGCTGAATTACTAGTTGATATGATAGAATCCTTGTGAAGCAGTAGCCTAAGCTAAGCTTGGTTGGGATCTTGTTGTGTCTTTTGCACTGTCATCGTGCAACTTATATATATATATATATATATATATAGTTGTTGCCAGTTTCAAAGAACACACACATTTAACTTTAAACTTCTCATTTACCCTAAATAACATGATTTTGTAGGTACATAAATGTCATGACATGCTTAAGGCCACATGTTTGATAACTCTTTTTTCTTTTATAAATTTCATGTACAGTTTCACATAAAATAAGGTGGGTATTATATGTACTCTTGTCTCTTTACTTTTTTTCCTGCAATTCATAATTTTCCTTTGTTTAAATTCTTTCATTGTTTCTCTATGATTGACTCATCAAAGAATTGGCCTTGGGTAAAGTGAACGTTCTAATATATCCCATTTCCATTTGAGAAAAGGCTCAGGGAATGGTGGAAAGAGTGTCACAGGAGATACAAAGTTGTCAGGTCTGCAGGAGGGTTAACTTGGTGGAACCGAGAGGTTTAGAGAACAATATTATTGATAATATTGCAATGGTTATTTTCATGAAATTGCACTTCTGTTCTTTCTTTCTGTCCCTTAAGCACTAAAAGAAATTAATTACACTGTTATAGTTCAAAGATGCTGGTGGATTTGAAGCATTGGTCACTGGGAAGACAACAGATGTACAATGCATTGATGTGAATGAGAGGATTATTAGTCTCGAGAAGCTCAATCCGACGCCTCGTCCCTCAACGTAAGGTGTTAAATCTTACCAATAAACTTAATTTTCAAGATTCTTGACAAGGTACTCATTGGTGGTTTCATTTCCCAGGTCTCCCAATTTGGAAGGACGATGGAATTTTGAGTGGTTTGGAGCTGGTAGCCCAGTTCTTCTTCTTGCCAAAATATTTTTTGGGTAACTTCTATTTTTTGGGATAACATTCACTTCTATTTTTCCTATTCCAACTTAAACTCATTAGTGTATGAACTACGTATACGAAATGAAGTACTTGTGCAAATAATGAATCAATTCTACATGAAGTAGTTTATTCTTTTTCTGCAACCTGCATTGTGCTACTAATAAATAATTGTCATACTAGAGATCAAATGGAGACCATGTCTTCAAGGCTAACAATTTAGAGAAGAAAGTTTGAACCATGGGTATGATGGTTGCCTTCCACTATCTAAAGTGCATGCTAAATGTTTAAGCATCTAATCATTCCCTTCCATACCTTTGCACCAGTGGCAAATTAAGTGATAGTTGAGTGGGGAAATTGCACCTACTTAAATTTGATAAAATTACGCTATATACCAAAGCTTTTGCTTAGAATTTCAAATCATTCCATTTTGAACCTGATAATTTCCTAGAAAAAGTGAGAAATTGGTAGAATATTTTTATCTGAGGCTGAAATTTGATAAAATTACGCTATATGCCAGAACTTTTGCTTAGAACTTTGACTCTTTTCCATCTTTGAACCTGATAATTTCCTAGAAGAAGTCATATTGGTAGGATAGTTTTATCTGAGGTGTCTTGCATAAGGGAAAAAGTAAAATGCTAAAAGAAATGCTTTTAGCTTCTTTCATCCAACTAAAGGGCCTTCCGTTTATCTTTTCATTTTCTCTCTTTCATTTCTGATGACACAATATTTGAATTACTTTATTTTCTTACGTGCACTTGCTTTTAAGCTTAGAAGTCACAGCTAGCCCACAAAGTTGCTTGTCAGGGCCACTTTATAAAATCAACAAAATTGCTTGTCAGCTATCTTCTGGCTATATAAAATAAAAATAAAATTTATGATTTGTTTTGTGTGAATGTACTATGTATAGTTAGAAAGTTAGCCAAGATGGGTTGATATATTCATATTACTTGTATTAGTGGGAAGGTGTGTACCCAGTGAAACAGTTGAGATACGTGCAAGCTTGTTCAGATACTATGGTTATTCTCCCAAAGAATAAGAAACCCCACAAAGTGATGAGATGAATCACTCTTTTAGTCCACCAAACTAGATAAAGGTAAAGAAATAATCTTTGCTCTCACTGGGAAAAAATTCTGATTGGGAAGAAAAGGTATGGGAATAAGAAAAGAGGTCCAACCTTTTTAAGGAATGCAACCGATTTTATGACATTGAATTTTGAAATTTGGCGAAAGACCAAACTAAACCTCCATTCATGGAGGCCAATTGTTTCCCTTCAGTTAGGTCTTTACTATTTAAGTACATTATTGTCTACTAGGTATTTGCATGATTTTTCTTTTGAAGGAAAGACAACATTTACCATAATTGGTTGAAATTTCCTTCCCAAAAATTGAAAGTAAAGATCTTTCATATTTAGTTAATCTTTTTCACGGAGAAAATAATTTTGGACCTCTATAGATTGTGGTTATTTCCTTCTCACTTGGTAGCATCCACAATGCAACTATTAAAGGGGGGGGGGGGGGGTTACAGAGTTTTGGGGAGAATTTGTGAAATACAAGTTTCTATTTTGAAACTAGTAATGTTGTATTCCTCAACATTAAGGACATGTTGGAAACCTTCGAAAAAGAGAAAACAGTAATTAAAAGTATTCCCTACAAAAGTCCTAACAAATCTACAAGCTGCTTTGATCCTCTATACCTTTCCATTTGACTTTCTGAATGAAATTGTACCTATCTCCAGAGTATATACTATCCCTCTCACTCCAAGTAGTCCACTTGATGCAATGTAGAATTATCCTCCACCATTTCTTCTGGCTCTTGTTACCTCCTCTTCTGATCCAACAACTCAAAAATCTACAACATGCGTAGGAATGGTCCACTTTGTCTTTGTGAGACTGAAGAAGATTGTCCATCGTCCATCTCTTTTGTATATGTGCAGTGCAAAATAGGTCTCTGTCTGCTTCTGCATAGTATGTATCTGGATACAATATTTAACCCCCTTCTCTTCAAAACTTCATGTTGTCAAGCAATATCTCCTAGCTACCAACCATGTAAAGCATTTTACCTTCGTTGATGCTAGGTTTTTCCAAATATTCCTCCATACTTTTTGACGGTCTCTAACTTGCTGAACATTTCTTTTTTATAAGCCCTGTTTACTGTTAATACCCCCTCCTAACTGTGTTCCACCTCAAAAATGTCAGAGTCAGAAGTGGTACCTTTGAAATCCTCTATCCCTTTTAGAAAATTGGCACTCTATCCACCTTCCAGTCATTCAATAACTTGCTAAAGGATAAGTTCCATCCTTGTGGAGTCCAACATTTATTCATAGGAGCCTCAAGCGTTGTTCTGGAGAGCAAGAAGCGGAAAAAAGCGAAGAGCGCTTGCTTCACTGAAGCTGAAGCAAAGCACACATTTTTTTCTACTAAAGTGTTGTTCAGAACAAAAACAAAAAATAGTAATATGCATATATAAATAACCAAGAACTCAATAGATATAACATATTAAGCAAATCTTTCAGTTCTTAAATTAGAAAGCTTATAAAAGATGGTCAATAATCCTCATAATCATAACATATTAAGCAACTCGTAATCATAACATATTAAGCAAATGCAACATCAAAACCAAATAAGTAAATAGACAGAGCATAACAGGGGAAAGAAAACCCTAGAAGTAGTTCCTGAAAGCCTGAAAGAGAGTCCAGAGAAGACGAAGAAAAGAGATTAAGAGAGGAAGAACTTATCTTTTTGAGTCGCAGCAACAGATGTTGAAATGTTTGAGTCACAGAAGAAGAAGAAGAAGAGCGAAATGTTTAAGTCACAGCAGGCAAGTGTGTTATACAGAAGGAAAAAAAACCTAACAGCACTTAAGCACGCTTTTTGTCATCTTTGCTTTAAGCGCGCTTCAAGCTTCGCCTACTGAAGCACTCATTTTTTTAGCAGCGCCTCGCTTCAGACCATATAAGCGCAGTGCTTGCACCTCGCCTCGTTTCGCGCTTTAAGCGCGCTTTTTGTCGCTTTTCACAACACCCTAAGGATTATTTAAGGAGAAGTTCTATCTTTGTGGAGTCCAACATTAATTCATAGTAGCCTCGGGATTATTGCACAAGACAAACAGATCAGGAAAGTATTCCTTTAGAGGAGTCTGTTCATTCCAAGCATCCCTCCAAAATTTATTGTTCTATCATCTCCCACTTTAACTAACATGTTCACTTCTAACTTGGGCCACAAAGCTCTGATAGTTCTCCATACCCCAACACTTCTTATCGCTGCACCAAGGGCTGGACTCACCAAATTTGCATTTAACAACATCCTTCCATAAGGCTTGCCCTTGTCTTTTGTATCTCCATAGCCACTTCAACAGTTCCTGATGCCCAAAGCCCCCAAATCTTTGCTAAGTTTAACCAAACTAGTATTGGGAACGTACGATGCACGTTTGTCCCCTACAACTGCAAAAAATTTGGACATCGAGTGAAAGATTTATGGTGCTTTCAAAATAGAAACAATTCAATCACAATAAGTTAACTAAGATACATAGAGCCTTACAGCACGCCTCACGGGAAACCAAAGCTTGAAAACAATTTCAGGAATTAAATATGGAGAAACAAAAACTGACCTGAAAAATGCCTCTCCTACTTTCTAGGTGAGAGAGTACCCTCTGTTCGGTAGGTCACCACCAACCTCATCCTTCTCCTCAGCTATCTCCGTCTGTGATAGCTTTCTCCTTCCCTTACAGCAGTTCCCTTCCACAGACATGGAGGAAAATAGGATTTATTTCCACACCGGTTTCAAGTCATTCAATAATATCAGATGGATATCTGGGGAGGAAGCCTAGTTTGATTGGGTGGAGCTTAGTATAAACTTGATGAGAAGAATAAATCTCAGCAAAAAAATGATGGAGTGGATTTGTTTTCTCCTGGAAGAAGCCTCAAACGACAATAAGAATCTTATGAGGAGATTGAGAATGAACTATGAAGGACCAAATGGCAGAGTATTTTAGTACAAGGAAGTTTAATGCCCGCGGAAGACTACTCTTGGAGGATTGAGGCCATGAGCGTATAATTGGATTTATAAAAGTTGATTGGGTAGGATCACCCTTTTATAGATTTTCTATATCCGGATATTGTGTTTAGGAGGTCATTTGGTGGCTTAGAAGAGTAAGTAACAAAGTGTGGTTGATCTAGTGCAAAAGCAGAATACTGAGCAATAGTCATAGCAAGTTGTGAGCTAATTTAGATTAAACAGTTGCTGAGAGAACAATGATAATTGAATGAAAGAAAAACCACTGGTAGGGATATGAATGGAGTCTCGCTCAGTTAAGAGAGTTGTAGGATTCGTAAAATAGGAAAAGAGCATCTCAAAGTATGGGGCAAATGGAACTTGTGTGTGATAGCCAAATGTCCCTTCATATCACATCAAATCTGGTATTTCATCGGAGGACGAAGCACATTGAGATTGACTCTCACTTTGTCAAAGAAAGATAATCTCGGAAGATACTGTTACAAAATTTGTAAAGTTGAGTGATTAGCTTGCAAATGTCTTCACCAAGTCCCTCACCGGTCCTCGTATTAGTTACTGTTGGATATGTAGCAAGAATTGATGGGAAATAGAGGAAAGAAGAGGAATTTGAAGAGGAAAGAAGAGGAATTTGAAAAGTTTAGAACTTGAAAGGTTGGGAACTTGAAAAGTCCTCTAATGCTTTAATGAAAAAGGCAATAGTCCCTCATCGGTAATGGAAATGAAAATAGGAGAGTTTAAATAAATAAACACTCCTATTAATTGTTAAAAGGGTTGTAAAAAGGGACCCCCCTCGCGCCGTCGTCGTCGCTCGCTTCGGCGTCGGCTACGGCTTTGGCAAATGATCGAGAGATAATTTTTTGGACAAATTTATTTTAATTATTTATTTAATTAATTTAATGGCCAAAAATTATTTTCAATTAATTAGTTGATAACAGAAGTTAACCGAAATGTTTTCAACTTTTTAGTTAACCCGACCCAACTCGGATCGCGCACGTGACCCGTTTTAAATTCCGTTATATTTAAAAATTTCCGTCATGACTGTTCTGAAAGGTTGCAACTTTCAGGAACAATCAATACCATTTGAAAGTTTGCAACCTTTCATTAATGGTCGTGTCAATTCTGAAAGGGTTGCAACCTTTCAGAATATATTCTTCTTGCCTATAAATACCATTCAGTCTTCAGAATATTTTCCTCCGAATTTTCTAGATCTTCCTTCTTCTTAAAAACACATATTTCTTCGTGTACTTTCCTGCTGTGGATTGATTCGCTGACAGTAGAGTTTTTGGTATCTATACTCTACTGATTAAGATCATTTTACCTTGGGAGGTTATATTCCAAATCAAACCTCGGATACTAGAGGGGAATAATTTCCTTAAGGGGACACTGTGAATTCAGTGGACTTGATTTTCTTCCTATATTATTAAAAAAAGTATTCCAGATTCTGGTAAGTTTTAAAGATTCAATTTTTTTTTTTACCAATAAATTTCTGTTCACCTTTTTTACTGGTTCTAAAAATCTCAGTTACTTAGTGTTTCTGACTGATTTATTACAATCAGTAATTTCTGATTTTCATAACACAGATTGGCAACAGTTACATCTGTAAGAAGGTCGGTACATGTAACAAGGTCCGTACATATGACTTGTATGCACTAACTTGAGGGGGAGTGTCAAAATTGGAATATGAACAAGAATATAAATAGTATATGGAACTCTAATTGGATAAGGATTGCAATGTAGTGTCTATAAATAGGACATAGTGCAATAATGTAGAGACATAATTCAATAGTATATTTCTATTATATTTCTCATAGACACCTTTACTTGAGAGGCCTGAGCATGCATGCTTGTTCACTTTTAGTCAATATGCTAATTTCAGTTGATATCTTCTTAACATTGAGGTGAATGATCGTAGTTTTGCTTTGAGTTTAGTTTGATGAATGTCAGCTTATAATATTTCTACCGGGAACATGCTTTTACAGGAGAATTCCTCCAACATTGGCAAATTTATCAAAATTGGATGTGTTGATCAAGGATGGATGTGGGACTGCTACCGCACAAGTCAAAATACTAAATTCGGTAATTTATCTTTGTCAGGAAATTTGATATGTACATCCCATGCTCTAATATTCAGAAAATGATCTTCCTCTTCTAGTTATAGAATTGGAAATAAAACAATACTATTGTTTATGTTTTCTACAAACAAACGTCTTTGGGTTCGCAAACTAGTCATGCAGGGCAGTAACATAGGGATCGTTATGCGGTGAGTCATAGTGTAGTGATTTACTCACAGTGAGTAATAATCTATGGACTGTTCTACAATGAATAATATACAAGGATTGTCTACTTCAACAGCAGTTTTATGATCCCTAGATACTTTTTATCCAGGTATTGGTAATACAGTATTGTCATTCTACGATCTCTCCTCCATGAGATTATGTATAGTTTTCTGCATAAATTTGCCGCATTTGTATTTTTTTTTGATAACCAAATTTTTCGTTTTTGTATTTAAAAGTGCAACCTGAATTCTGCCTTAGTTATGTAGAGTTTGTACTTTGTACCGGAAACTACACATTATATTAGTTATTATGCAGAGATTATATTAATAACAGAGTTATGTGTTGCAAATCACTGTAATATTAGTTACGAGAAATTGAGATTATTACTCTTAGTTGGTCAATCAAATGCCCATGATGTGATATAACTGGTCAGCACCATATATCTTGCTTTCTTCCTCCTTTAATGCCTCACATCTGCTTGATAATTCGTACGCCAAGAGACACATTGATGGCAAGTGATGTTTTGGTCATGTTACCTAGAAAAATAGGTAGGACGAGATAACAAGCGCTAGATGTATAGCTCTATACTTTGACATTATTACAATACCAACTTATTGAAACATACGAAAACAGCTTAATAACAGAAACTTAGTAATTGAGGCCATTAACTTGCTGACAAGGTGGTAACAGTTTTACATTTACGTGTCACTTTTTAAAATCCTTATTTTGTATGACTATGTCTGTTTGGTATCTTGAATATCCTTTTGCAGCAGAAAGTAAAGCTAAGCGGAATAAAGCTGGAAGTGAATGATATAGGAAAATCTTAGCTTTACTGACTAGGGGATTAGGTACACAAACAAGATACATGCTTATTCTATCTCCAAATTTCCAGAAGTCTCTGTTCTTCAGTGTTTAGTTCACCTGTTCTCAGACTTTATTTAAGTTAAGAATTTTATGAATTTTGTGTAGCTAAAGATTTCCACAGCTAATGAGGTATCAAGAAGCTGCAATAGCAGTATTGCAATTCAAAACACAACAACAACAACAACATACCTAGTGAAATCCCACAAATTGAGGTTGTAGAGGGTAAAGTGTATGTAGACCTTATCCATACCTCGTGGCGGTAGAGATACTATTCCCGGGAGACCCTCGATTCAAGTGAAGCAGAATAAAGTAGTAATGAAAAGGAGAAACAACATTGAAGAAAACATGTCAACTAATAGGAAAGGAGTGCAGAGCATAAACATTAACAAAATAGTGCAATCACCTAAACATAATAAACAACAGATTGTAACAGATAACAAAAGCAAGAAACTACATGTATAAGAGTATTTATTGTGACAAACATGGTGCGCCAGAGTCCAGACTACTACCAAACCTAATCTCGTCAAAAATCAAGAAAACCCTCGACTACCTACTAACCTTCTACCCTAATCCATGACCTCCATACCTGCCTATCTAAGGTCGTGTCTTTAGTAAGCTAAAGTTGTAGCATGTCCTGTATAATCGCAATCTACCTAATACTTCTTCAGCCTACCTCTACCTCTCCTCATATCCACTATATCCAACCTCTCGCACCTTCCTTCACTAGGGCATCGACACATCTCTTCTTCAAATGTCCAAACCATCTTGGTCTTCCTTCCTCATCTTGTCCACCACAGAGGTCACTCTCACCTCTTCCCAGATACCCTCATTCTTAATCTTATCACTCCTAGTATGCCCACACTTAAATGTTATTTTAGTTACAAGCTCAAATTCTAGACTTGCATACAGTTCCCAAAAGAAAAGAAAAGAAATTCAACATCAATAGTACCGGATATTATCATATCATATTATATTATAAGTGGAAGCTCCAAGATGTAAAGTTGAATTACCATTTTATCCCTATACTAAATAAAAATGTTATATTCATATTTGATTATTTTGTTTTTGAAAAATATTGAGCAGTAAACGTTTTTTACTATTAATGAATTGAGAATATTTGAACAGTTATGAAAATTAAATAATCTAAACGTTAAAGAAAATGAAGAGACAAATGTTAGTTAATGAGAGCAAATAGGTAGAGATTTAAGTTGCACATTAACTAAAATATAGAAGCAGTTACCTTTACATTGCTAGAATCTTAAAAGTTGTAAATTTCAATACAATGAATCTCATAGTTAATTTATTAATATATGTTATTTTCAATGATAAATACATGAAAAGAAGCTAAAGAGACTAATTAATCATTTAAAGTGAAAGTATTATATAAAGCCAAGAATAGTTTTCATTTTCCTCAAGTTCCCTCTCCATTTTTATGGGCTCTAAAGAAGAGTATATCATTTCTCTGAGCAGTATTTTCTCAATCAATGTCAAAGTTAAAGGCTATTAAAATACGCTATGAGAGTTGTTGGATTTGTGCAAGAATTTCAGCTATGAATGTTGTTGGATTCATCAAAGAAATTTCTTAGTGAAGAATGCACTTATGACACTTATTATTTAATTTCCTTGTTAGGGCTTAATATATGCAACACACAACATTAATTTTACGGTAAAAGATTTCTATATGTTACTGATTTTACACATTTCATTAACGTAGCACATAAAATTTCACTTATTCAATTAAATATTGTAGTTGTATAGTTTTTTGGATTTTGGATCTTAGAAACAAAAACACCAGGATGCTTATCAATTTTAAGAACATGTAATTTGTATTTTCTATTTTATAACACATAATATAACTAAAAAATATTGCTAATCTACAATCTTCACAAAAATATTTTTTATGTATATGGCCACATGCACGTGGCGCGTACCCAGAAACTAGTTAACATAAGGAGGAGAAGATGAACAAAGTGTTAGGTCTTGATAAGCTATAAATAAAAAGCTTATGATGGTGTTAACAATGCTAGCTTGATCCACCTCGACTATTTCACCAGGAACCTACTACCTCCAACCAGCAGGTATCTGGTACTTCCTGCTCACCAAGGTTTAGACAAATAGAAAGAAAGCACCTCACTATTAAAAACTCAAAATGAGAAGTGTTTAAATAAGTTAGGGTCAACATTACTTAATATTCTTATTTTGATGAGGCAAAAGTGAATTGGGGCCTGTTCATGTGTTGATTCTTGATTTGCACTCAGTTTGAAACTTAAGAGGCTCATGCTCAGTTGCCTCATTATCACTTAGGCCTTGACCCCTGCTTCTTCAGGCTGGTAATTAGCTCTAGGCTGGTCAATATCAGTTGAGTTGTATTCTTCATATTGAGTCTTACACAAGGACTCAAGGTGTTGCATCTTTCAATTTATCGGTTGAGGTTTTTGTGAAATGTTAATGATATTATTAGTATATCTGATCATATGTATCTGAAGAGGTGAAATACTTTTTTGTGAAATGCAGATTGAGAATAAATTTATCATCTCCACCAAGTATAGTGTTGAAGGGCCTCTTCGTATGAAAGAAGAGTATGTTGAAGGGGAATTTGAATCTCCAAAAGTCGATGAGGAAGCTGTACCTGAACAACTAAGAGGTGCTTTTGGCCAGGCATTTAATACTCTGCAACAACTTCCTGTCCCCATTAGAGATGCTGTGTCCAGTGGCATGAAAGTTTCTCTAAGTAAGATTTAAGTATTTTCAATATACTCTATGCATATATGTATCTATGGTGTACAAGTGTTGTTGAAGTATTGCGATCTGGGGAGGGTAGAGTCTACGGAGACCATGCCCCTACCTCAAAGGTAGAGAGATTATTTTCGATAGACCCTCCGCTCAATAAAAGAATGACAGATAGCAATGGAAGTACAAGAACCAACAGATTGTAACAAAAATAATAGATAATAAAAGAATAATACTAAAAAAAATAATATGACAGAAAAAGTACAAAAGTAAAATATCTCAATAACCTAAATTATCGTTAAGAAATTCAAATTTAAATCAAGTAGACTACTGCTGCAACTAACCTGTTCATTGTTCAAATTGGCAGTAACAGAAGTAATTTTTAACACACTTTAAATGTCTGTCAATTCTGTTTGAAGCCTCTCAATCATGTCAAATCTTCAAATGTTTAAATCTAGCGTTGGTAAAAGCAGTTCGAAGTTAATTTTCTGCCTGATCTGTCCTTTAAGCAAGATTTGTTTTTGGTTATTTTGATTCTTTGATCTTATTCAAGCTTATATTCTCATTTGCATCAGCATCTGCCTTTTGAAAAATTCGTTTGTACTTCAGCACATTAATGTTGCTTGAACTGCCATATTACGTATATTTTGGTTACTAATGCTTTTTTCAAAGGCTTCTTATTTTTAGTTCCTAGGACATATCCTAATCTTTTAAAAAACAAAGAATAAACTAAAGTAGATAAGAAAGATAGAAGCTTGAAGAAAATAACTTTTGTAGATAAATGATATTGTTACTGTTTAGGATTTATTTATATTGCTTCTCACTCTGGGCTGTTACAATATCAGGCGGGACCTTTCAGAGACTTATTCTGATTTCCTACCTTGATGACGAGATCCTG</genome_strand>
        <mrna_strand>TCACTTCAAAATTTGGTACCACCATTTTCTTGCCGGCGTACGACCTATACATCTCCTTGTACACCTATCGCCATTTTCCGAGGAGGGAGAAGAAGAAATGCAAGAAAGATGTTGAGGGTCTGTAGAGCTATGGTTGAGAAGACAGTACAAGGGGCTTCTTCTACTTTTGCTAAGGAAATGGAAAGGCTTTCAGCTAAAGAGTCTCTGCTTCTTGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAAAGATGCTGGTGGATTTGAAGCATTGGTCACTGGGAAGACAACAGATGTACAATGCATTGATGTGAATGAGAGGATTATTAGTCTCGAGAAGCTCAATCCGACGCCTCGTCCCTCAAC..............................................................................GTCTCCCAATTTGGAAGGACGATGGAATTTTGAGTGGTTTGGAGCTGGTAGCCCAGTTCTTCTTCTTGCCAAAATATTTTTTGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................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.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGAGAATAAATTTATCATCTCCACCAAGTATAGTGTTGAAGGGCCTCTTCGTATGAAAGAAGAGTATGTTGAAGGGGAATTTGAATCTCCAAAAGTCGATGAGGAAGCTGTACCTGAACCACTAAGAGGTGCTTTTGGCCAGGCATTTAATACTCTGCAACAACTTCCTGTCCCCATTAGAGATGCTGTGTCCAGTGGCATGAAAGTTTCTCTAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGGACCTTTCAGAGACTTATTCTGATTTCCTACCTTGATGACGAGATCCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E279308" ref_strand="-" ref_description="SGN-E279308 [cLEL-4-J17](-)">
      <seq>gcacgagttagtctcgagaagctcaatccgacgcctcgtccctcaacgtctcccaatttggaaggaccatccaattttgagtggtttggagctggtagcccagttcttcttcttgccaaaatattttttgggagaattcctccaacattggcaaatttatcaaaattggatgtgttgatcaaggatggatgtgggactgctaccgcacaagtcaaaatactaaattcgattgagaataaatttatcatctccaccaagtatagtgttgaagggcctcttcgtatgaaagaagagtatgttgaaggggaatttgaatctccaaaagtcgatgaggaagctgtacctgaacaactaagaggtgcttttggccaggcatttaatactctgcaacaacttcctgtccccattagagatgctgtgtccagtggcatgaaagtttctctaagcgggacctttcagagacttattctgatttcctaccttgatgacgagatcctgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C03HBa0013A17.1" temp_strand="-" temp_description="C03HBa0013A17.1  AC238559.1 htgs_phase:2 submitted_to_sgn_as:gi|261249975|gb|AC238559.1| upload_account_name:jianfeng-ren Solanum lycopersicum chromosome 3 clone C03HBa0013a17, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces">
        <position start="20003" stop="8413"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19703" g_stop="19658" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="47" r_length="47" r_score="0.891"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19657" i_stop="19580" i_length="78">
            <donor d_prob="0.995" d_score="0.89"/>
            <acceptor a_prob="0.993" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19579" g_stop="19496" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="48" r_stop="131" r_length="84" r_score="0.964"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19495" i_stop="13504" i_length="5992">
            <donor d_prob="0.912" d_score="1.00"/>
            <acceptor a_prob="0.950" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="13503" g_stop="13407" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="132" r_stop="228" r_length="97" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="13406" i_stop="9829" i_length="3578">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="9828" g_stop="9612" g_length="217"/>
          <reference_exon_boundary r_type="cDNA" r_start="229" r_stop="445" r_length="217" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="9611" i_stop="8768" i_length="844">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="8767" g_stop="8715" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="446" r_stop="498" r_length="53" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C03HBa0013A17.1" gen_strand="-" ref_id="SGN-E279308" ref_strand="-">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>497</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C03HBa0013A17.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E279308" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="19703" e_stop="19658"/>
          <exon e_start="19579" e_stop="19496"/>
          <exon e_start="13503" e_stop="13407"/>
          <exon e_start="9828" e_stop="9612"/>
          <exon e_start="8767" e_stop="8715"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGATTA-TTAGTCTCGAGAAGCTCAATCCGACGCCTCGTCCCTCAACGTAAGGTGTTAAATCTTACCAATAAACTTAATTTTCAAGATTCTTGACAAGGTACTCATTGGTGGTTTCATTTCCCAGGTCTCCCAATTTGGAAGGACGATGGAATTTTGAGTGGTTTGGAGCTGGTAGCCCAGTTCTTCTTCTTGCCAAAATATTTTTTGGGTAACTTCTATTTTTTGGGATAACATTCACTTCTATTTTTCCTATTCCAACTTAAACTCATTAGTGTATGAACTACGTATACGAAATGAAGTACTTGTGCAAATAATGAATCAATTCTACATGAAGTAGTTTATTCTTTTTCTGCAACCTGCATTGTGCTACTAATAAATAATTGTCATACTAGAGATCAAATGGAGACCATGTCTTCAAGGCTAACAATTTAGAGAAGAAAGTTTGAACCATGGGTATGATGGTTGCCTTCCACTATCTAAAGTGCATGCTAAATGTTTAAGCATCTAATCATTCCCTTCCATACCTTTGCACCAGTGGCAAATTAAGTGATAGTTGAGTGGGGAAATTGCACCTACTTAAATTTGATAAAATTACGCTATATACCAAAGCTTTTGCTTAGAATTTCAAATCATTCCATTTTGAACCTGATAATTTCCTAGAAAAAGTGAGAAATTGGTAGAATATTTTTATCTGAGGCTGAAATTTGATAAAATTACGCTATATGCCAGAACTTTTGCTTAGAACTTTGACTCTTTTCCATCTTTGAACCTGATAATTTCCTAGAAGAAGTCATATTGGTAGGATAGTTTTATCTGAGGTGTCTTGCATAAGGGAAAAAGTAAAATGCTAAAAGAAATGCTTTTAGCTTCTTTCATCCAACTAAAGGGCCTTCCGTTTATCTTTTCATTTTCTCTCTTTCATTTCTGATGACACAATATTTGAATTACTTTATTTTCTTACGTGCACTTGCTTTTAAGCTTAGAAGTCACAGCTAGCCCACAAAGTTGCTTGTCAGGGCCACTTTATAAAATCAACAAAATTGCTTGTCAGCTATCTTCTGGCTATATAAAATAAAAATAAAATTTATGATTTGTTTTGTGTGAATGTACTATGTATAGTTAGAAAGTTAGCCAAGATGGGTTGATATATTCATATTACTTGTATTAGTGGGAAGGTGTGTACCCAGTGAAACAGTTGAGATACGTGCAAGCTTGTTCAGATACTATGGTTATTCTCCCAAAGAATAAGAAACCCCACAAAGTGATGAGATGAATCACTCTTTTAGTCCACCAAACTAGATAAAGGTAAAGAAATAATCTTTGCTCTCACTGGGAAAAAATTCTGATTGGGAAGAAAAGGTATGGGAATAAGAAAAGAGGTCCAACCTTTTTAAGGAATGCAACCGATTTTATGACATTGAATTTTGAAATTTGGCGAAAGACCAAACTAAACCTCCATTCATGGAGGCCAATTGTTTCCCTTCAGTTAGGTCTTTACTATTTAAGTACATTATTGTCTACTAGGTATTTGCATGATTTTTCTTTTGAAGGAAAGACAACATTTACCATAATTGGTTGAAATTTCCTTCCCAAAAATTGAAAGTAAAGATCTTTCATATTTAGTTAATCTTTTTCACGGAGAAAATAATTTTGGACCTCTATAGATTGTGGTTATTTCCTTCTCACTTGGTAGCATCCACAATGCAACTATTAAAGGGGGGGGGGGGGGGTTACAGAGTTTTGGGGAGAATTTGTGAAATACAAGTTTCTATTTTGAAACTAGTAATGTTGTATTCCTCAACATTAAGGACATGTTGGAAACCTTCGAAAAAGAGAAAACAGTAATTAAAAGTATTCCCTACAAAAGTCCTAACAAATCTACAAGCTGCTTTGATCCTCTATACCTTTCCATTTGACTTTCTGAATGAAATTGTACCTATCTCCAGAGTATATACTATCCCTCTCACTCCAAGTAGTCCACTTGATGCAATGTAGAATTATCCTCCACCATTTCTTCTGGCTCTTGTTACCTCCTCTTCTGATCCAACAACTCAAAAATCTACAACATGCGTAGGAATGGTCCACTTTGTCTTTGTGAGACTGAAGAAGATTGTCCATCGTCCATCTCTTTTGTATATGTGCAGTGCAAAATAGGTCTCTGTCTGCTTCTGCATAGTATGTATCTGGATACAATATTTAACCCCCTTCTCTTCAAAACTTCATGTTGTCAAGCAATATCTCCTAGCTACCAACCATGTAAAGCATTTTACCTTCGTTGATGCTAGGTTTTTCCAAATATTCCTCCATACTTTTTGACGGTCTCTAACTTGCTGAACATTTCTTTTTTATAAGCCCTGTTTACTGTTAATACCCCCTCCTAACTGTGTTCCACCTCAAAAATGTCAGAGTCAGAAGTGGTACCTTTGAAATCCTCTATCCCTTTTAGAAAATTGGCACTCTATCCACCTTCCAGTCATTCAATAACTTGCTAAAGGATAAGTTCCATCCTTGTGGAGTCCAACATTTATTCATAGGAGCCTCAAGCGTTGTTCTGGAGAGCAAGAAGCGGAAAAAAGCGAAGAGCGCTTGCTTCACTGAAGCTGAAGCAAAGCACACATTTTTTTCTACTAAAGTGTTGTTCAGAACAAAAACAAAAAATAGTAATATGCATATATAAATAACCAAGAACTCAATAGATATAACATATTAAGCAAATCTTTCAGTTCTTAAATTAGAAAGCTTATAAAAGATGGTCAATAATCCTCATAATCATAACATATTAAGCAACTCGTAATCATAACATATTAAGCAAATGCAACATCAAAACCAAATAAGTAAATAGACAGAGCATAACAGGGGAAAGAAAACCCTAGAAGTAGTTCCTGAAAGCCTGAAAGAGAGTCCAGAGAAGACGAAGAAAAGAGATTAAGAGAGGAAGAACTTATCTTTTTGAGTCGCAGCAACAGATGTTGAAATGTTTGAGTCACAGAAGAAGAAGAAGAAGAGCGAAATGTTTAAGTCACAGCAGGCAAGTGTGTTATACAGAAGGAAAAAAAACCTAACAGCACTTAAGCACGCTTTTTGTCATCTTTGCTTTAAGCGCGCTTCAAGCTTCGCCTACTGAAGCACTCATTTTTTTAGCAGCGCCTCGCTTCAGACCATATAAGCGCAGTGCTTGCACCTCGCCTCGTTTCGCGCTTTAAGCGCGCTTTTTGTCGCTTTTCACAACACCCTAAGGATTATTTAAGGAGAAGTTCTATCTTTGTGGAGTCCAACATTAATTCATAGTAGCCTCGGGATTATTGCACAAGACAAACAGATCAGGAAAGTATTCCTTTAGAGGAGTCTGTTCATTCCAAGCATCCCTCCAAAATTTATTGTTCTATCATCTCCCACTTTAACTAACATGTTCACTTCTAACTTGGGCCACAAAGCTCTGATAGTTCTCCATACCCCAACACTTCTTATCGCTGCACCAAGGGCTGGACTCACCAAATTTGCATTTAACAACATCCTTCCATAAGGCTTGCCCTTGTCTTTTGTATCTCCATAGCCACTTCAACAGTTCCTGATGCCCAAAGCCCCCAAATCTTTGCTAAGTTTAACCAAACTAGTATTGGGAACGTACGATGCACGTTTGTCCCCTACAACTGCAAAAAATTTGGACATCGAGTGAAAGATTTATGGTGCTTTCAAAATAGAAACAATTCAATCACAATAAGTTAACTAAGATACATAGAGCCTTACAGCACGCCTCACGGGAAACCAAAGCTTGAAAACAATTTCAGGAATTAAATATGGAGAAACAAAAACTGACCTGAAAAATGCCTCTCCTACTTTCTAGGTGAGAGAGTACCCTCTGTTCGGTAGGTCACCACCAACCTCATCCTTCTCCTCAGCTATCTCCGTCTGTGATAGCTTTCTCCTTCCCTTACAGCAGTTCCCTTCCACAGACATGGAGGAAAATAGGATTTATTTCCACACCGGTTTCAAGTCATTCAATAATATCAGATGGATATCTGGGGAGGAAGCCTAGTTTGATTGGGTGGAGCTTAGTATAAACTTGATGAGAAGAATAAATCTCAGCAAAAAAATGATGGAGTGGATTTGTTTTCTCCTGGAAGAAGCCTCAAACGACAATAAGAATCTTATGAGGAGATTGAGAATGAACTATGAAGGACCAAATGGCAGAGTATTTTAGTACAAGGAAGTTTAATGCCCGCGGAAGACTACTCTTGGAGGATTGAGGCCATGAGCGTATAATTGGATTTATAAAAGTTGATTGGGTAGGATCACCCTTTTATAGATTTTCTATATCCGGATATTGTGTTTAGGAGGTCATTTGGTGGCTTAGAAGAGTAAGTAACAAAGTGTGGTTGATCTAGTGCAAAAGCAGAATACTGAGCAATAGTCATAGCAAGTTGTGAGCTAATTTAGATTAAACAGTTGCTGAGAGAACAATGATAATTGAATGAAAGAAAAACCACTGGTAGGGATATGAATGGAGTCTCGCTCAGTTAAGAGAGTTGTAGGATTCGTAAAATAGGAAAAGAGCATCTCAAAGTATGGGGCAAATGGAACTTGTGTGTGATAGCCAAATGTCCCTTCATATCACATCAAATCTGGTATTTCATCGGAGGACGAAGCACATTGAGATTGACTCTCACTTTGTCAAAGAAAGATAATCTCGGAAGATACTGTTACAAAATTTGTAAAGTTGAGTGATTAGCTTGCAAATGTCTTCACCAAGTCCCTCACCGGTCCTCGTATTAGTTACTGTTGGATATGTAGCAAGAATTGATGGGAAATAGAGGAAAGAAGAGGAATTTGAAGAGGAAAGAAGAGGAATTTGAAAAGTTTAGAACTTGAAAGGTTGGGAACTTGAAAAGTCCTCTAATGCTTTAATGAAAAAGGCAATAGTCCCTCATCGGTAATGGAAATGAAAATAGGAGAGTTTAAATAAATAAACACTCCTATTAATTGTTAAAAGGGTTGTAAAAAGGGACCCCCCTCGCGCCGTCGTCGTCGCTCGCTTCGGCGTCGGCTACGGCTTTGGCAAATGATCGAGAGATAATTTTTTGGACAAATTTATTTTAATTATTTATTTAATTAATTTAATGGCCAAAAATTATTTTCAATTAATTAGTTGATAACAGAAGTTAACCGAAATGTTTTCAACTTTTTAGTTAACCCGACCCAACTCGGATCGCGCACGTGACCCGTTTTAAATTCCGTTATATTTAAAAATTTCCGTCATGACTGTTCTGAAAGGTTGCAACTTTCAGGAACAATCAATACCATTTGAAAGTTTGCAACCTTTCATTAATGGTCGTGTCAATTCTGAAAGGGTTGCAACCTTTCAGAATATATTCTTCTTGCCTATAAATACCATTCAGTCTTCAGAATATTTTCCTCCGAATTTTCTAGATCTTCCTTCTTCTTAAAAACACATATTTCTTCGTGTACTTTCCTGCTGTGGATTGATTCGCTGACAGTAGAGTTTTTGGTATCTATACTCTACTGATTAAGATCATTTTACCTTGGGAGGTTATATTCCAAATCAAACCTCGGATACTAGAGGGGAATAATTTCCTTAAGGGGACACTGTGAATTCAGTGGACTTGATTTTCTTCCTATATTATTAAAAAAAGTATTCCAGATTCTGGTAAGTTTTAAAGATTCAATTTTTTTTTTTACCAATAAATTTCTGTTCACCTTTTTTACTGGTTCTAAAAATCTCAGTTACTTAGTGTTTCTGACTGATTTATTACAATCAGTAATTTCTGATTTTCATAACACAGATTGGCAACAGTTACATCTGTAAGAAGGTCGGTACATGTAACAAGGTCCGTACATATGACTTGTATGCACTAACTTGAGGGGGAGTGTCAAAATTGGAATATGAACAAGAATATAAATAGTATATGGAACTCTAATTGGATAAGGATTGCAATGTAGTGTCTATAAATAGGACATAGTGCAATAATGTAGAGACATAATTCAATAGTATATTTCTATTATATTTCTCATAGACACCTTTACTTGAGAGGCCTGAGCATGCATGCTTGTTCACTTTTAGTCAATATGCTAATTTCAGTTGATATCTTCTTAACATTGAGGTGAATGATCGTAGTTTTGCTTTGAGTTTAGTTTGATGAATGTCAGCTTATAATATTTCTACCGGGAACATGCTTTTACAGGAGAATTCCTCCAACATTGGCAAATTTATCAAAATTGGATGTGTTGATCAAGGATGGATGTGGGACTGCTACCGCACAAGTCAAAATACTAAATTCGGTAATTTATCTTTGTCAGGAAATTTGATATGTACATCCCATGCTCTAATATTCAGAAAATGATCTTCCTCTTCTAGTTATAGAATTGGAAATAAAACAATACTATTGTTTATGTTTTCTACAAACAAACGTCTTTGGGTTCGCAAACTAGTCATGCAGGGCAGTAACATAGGGATCGTTATGCGGTGAGTCATAGTGTAGTGATTTACTCACAGTGAGTAATAATCTATGGACTGTTCTACAATGAATAATATACAAGGATTGTCTACTTCAACAGCAGTTTTATGATCCCTAGATACTTTTTATCCAGGTATTGGTAATACAGTATTGTCATTCTACGATCTCTCCTCCATGAGATTATGTATAGTTTTCTGCATAAATTTGCCGCATTTGTATTTTTTTTTGATAACCAAATTTTTCGTTTTTGTATTTAAAAGTGCAACCTGAATTCTGCCTTAGTTATGTAGAGTTTGTACTTTGTACCGGAAACTACACATTATATTAGTTATTATGCAGAGATTATATTAATAACAGAGTTATGTGTTGCAAATCACTGTAATATTAGTTACGAGAAATTGAGATTATTACTCTTAGTTGGTCAATCAAATGCCCATGATGTGATATAACTGGTCAGCACCATATATCTTGCTTTCTTCCTCCTTTAATGCCTCACATCTGCTTGATAATTCGTACGCCAAGAGACACATTGATGGCAAGTGATGTTTTGGTCATGTTACCTAGAAAAATAGGTAGGACGAGATAACAAGCGCTAGATGTATAGCTCTATACTTTGACATTATTACAATACCAACTTATTGAAACATACGAAAACAGCTTAATAACAGAAACTTAGTAATTGAGGCCATTAACTTGCTGACAAGGTGGTAACAGTTTTACATTTACGTGTCACTTTTTAAAATCCTTATTTTGTATGACTATGTCTGTTTGGTATCTTGAATATCCTTTTGCAGCAGAAAGTAAAGCTAAGCGGAATAAAGCTGGAAGTGAATGATATAGGAAAATCTTAGCTTTACTGACTAGGGGATTAGGTACACAAACAAGATACATGCTTATTCTATCTCCAAATTTCCAGAAGTCTCTGTTCTTCAGTGTTTAGTTCACCTGTTCTCAGACTTTATTTAAGTTAAGAATTTTATGAATTTTGTGTAGCTAAAGATTTCCACAGCTAATGAGGTATCAAGAAGCTGCAATAGCAGTATTGCAATTCAAAACACAACAACAACAACAACATACCTAGTGAAATCCCACAAATTGAGGTTGTAGAGGGTAAAGTGTATGTAGACCTTATCCATACCTCGTGGCGGTAGAGATACTATTCCCGGGAGACCCTCGATTCAAGTGAAGCAGAATAAAGTAGTAATGAAAAGGAGAAACAACATTGAAGAAAACATGTCAACTAATAGGAAAGGAGTGCAGAGCATAAACATTAACAAAATAGTGCAATCACCTAAACATAATAAACAACAGATTGTAACAGATAACAAAAGCAAGAAACTACATGTATAAGAGTATTTATTGTGACAAACATGGTGCGCCAGAGTCCAGACTACTACCAAACCTAATCTCGTCAAAAATCAAGAAAACCCTCGACTACCTACTAACCTTCTACCCTAATCCATGACCTCCATACCTGCCTATCTAAGGTCGTGTCTTTAGTAAGCTAAAGTTGTAGCATGTCCTGTATAATCGCAATCTACCTAATACTTCTTCAGCCTACCTCTACCTCTCCTCATATCCACTATATCCAACCTCTCGCACCTTCCTTCACTAGGGCATCGACACATCTCTTCTTCAAATGTCCAAACCATCTTGGTCTTCCTTCCTCATCTTGTCCACCACAGAGGTCACTCTCACCTCTTCCCAGATACCCTCATTCTTAATCTTATCACTCCTAGTATGCCCACACTTAAATGTTATTTTAGTTACAAGCTCAAATTCTAGACTTGCATACAGTTCCCAAAAGAAAAGAAAAGAAATTCAACATCAATAGTACCGGATATTATCATATCATATTATATTATAAGTGGAAGCTCCAAGATGTAAAGTTGAATTACCATTTTATCCCTATACTAAATAAAAATGTTATATTCATATTTGATTATTTTGTTTTTGAAAAATATTGAGCAGTAAACGTTTTTTACTATTAATGAATTGAGAATATTTGAACAGTTATGAAAATTAAATAATCTAAACGTTAAAGAAAATGAAGAGACAAATGTTAGTTAATGAGAGCAAATAGGTAGAGATTTAAGTTGCACATTAACTAAAATATAGAAGCAGTTACCTTTACATTGCTAGAATCTTAAAAGTTGTAAATTTCAATACAATGAATCTCATAGTTAATTTATTAATATATGTTATTTTCAATGATAAATACATGAAAAGAAGCTAAAGAGACTAATTAATCATTTAAAGTGAAAGTATTATATAAAGCCAAGAATAGTTTTCATTTTCCTCAAGTTCCCTCTCCATTTTTATGGGCTCTAAAGAAGAGTATATCATTTCTCTGAGCAGTATTTTCTCAATCAATGTCAAAGTTAAAGGCTATTAAAATACGCTATGAGAGTTGTTGGATTTGTGCAAGAATTTCAGCTATGAATGTTGTTGGATTCATCAAAGAAATTTCTTAGTGAAGAATGCACTTATGACACTTATTATTTAATTTCCTTGTTAGGGCTTAATATATGCAACACACAACATTAATTTTACGGTAAAAGATTTCTATATGTTACTGATTTTACACATTTCATTAACGTAGCACATAAAATTTCACTTATTCAATTAAATATTGTAGTTGTATAGTTTTTTGGATTTTGGATCTTAGAAACAAAAACACCAGGATGCTTATCAATTTTAAGAACATGTAATTTGTATTTTCTATTTTATAACACATAATATAACTAAAAAATATTGCTAATCTACAATCTTCACAAAAATATTTTTTATGTATATGGCCACATGCACGTGGCGCGTACCCAGAAACTAGTTAACATAAGGAGGAGAAGATGAACAAAGTGTTAGGTCTTGATAAGCTATAAATAAAAAGCTTATGATGGTGTTAACAATGCTAGCTTGATCCACCTCGACTATTTCACCAGGAACCTACTACCTCCAACCAGCAGGTATCTGGTACTTCCTGCTCACCAAGGTTTAGACAAATAGAAAGAAAGCACCTCACTATTAAAAACTCAAAATGAGAAGTGTTTAAATAAGTTAGGGTCAACATTACTTAATATTCTTATTTTGATGAGGCAAAAGTGAATTGGGGCCTGTTCATGTGTTGATTCTTGATTTGCACTCAGTTTGAAACTTAAGAGGCTCATGCTCAGTTGCCTCATTATCACTTAGGCCTTGACCCCTGCTTCTTCAGGCTGGTAATTAGCTCTAGGCTGGTCAATATCAGTTGAGTTGTATTCTTCATATTGAGTCTTACACAAGGACTCAAGGTGTTGCATCTTTCAATTTATCGGTTGAGGTTTTTGTGAAATGTTAATGATATTATTAGTATATCTGATCATATGTATCTGAAGAGGTGAAATACTTTTTTGTGAAATGCAGATTGAGAATAAATTTATCATCTCCACCAAGTATAGTGTTGAAGGGCCTCTTCGTATGAAAGAAGAGTATGTTGAAGGGGAATTTGAATCTCCAAAAGTCGATGAGGAAGCTGTACCTGAACAACTAAGAGGTGCTTTTGGCCAGGCATTTAATACTCTGCAACAACTTCCTGTCCCCATTAGAGATGCTGTGTCCAGTGGCATGAAAGTTTCTCTAAGTAAGATTTAAGTATTTTCAATATACTCTATGCATATATGTATCTATGGTGTACAAGTGTTGTTGAAGTATTGCGATCTGGGGAGGGTAGAGTCTACGGAGACCATGCCCCTACCTCAAAGGTAGAGAGATTATTTTCGATAGACCCTCCGCTCAATAAAAGAATGACAGATAGCAATGGAAGTACAAGAACCAACAGATTGTAACAAAAATAATAGATAATAAAAGAATAATACTAAAAAAAATAATATGACAGAAAAAGTACAAAAGTAAAATATCTCAATAACCTAAATTATCGTTAAGAAATTCAAATTTAAATCAAGTAGACTACTGCTGCAACTAACCTGTTCATTGTTCAAATTGGCAGTAACAGAAGTAATTTTTAACACACTTTAAATGTCTGTCAATTCTGTTTGAAGCCTCTCAATCATGTCAAATCTTCAAATGTTTAAATCTAGCGTTGGTAAAAGCAGTTCGAAGTTAATTTTCTGCCTGATCTGTCCTTTAAGCAAGATTTGTTTTTGGTTATTTTGATTCTTTGATCTTATTCAAGCTTATATTCTCATTTGCATCAGCATCTGCCTTTTGAAAAATTCGTTTGTACTTCAGCACATTAATGTTGCTTGAACTGCCATATTACGTATATTTTGGTTACTAATGCTTTTTTCAAAGGCTTCTTATTTTTAGTTCCTAGGACATATCCTAATCTTTTAAAAAACAAAGAATAAACTAAAGTAGATAAGAAAGATAGAAGCTTGAAGAAAATAACTTTTGTAGATAAATGATATTGTTACTGTTTAGGATTTATTTATATTGCTTCTCACTCTGGGCTGTTACAATATCAGGCGGGACCTTTCAGAGACTTATTCTGATTTCCTACCTTGATGACGAGATCCTG</genome_strand>
        <mrna_strand>GCACGAGTTAGTCTCGAGAAGCTCAATCCGACGCCTCGTCCCTCAAC..............................................................................GTCTCCCAATTTGGAAGGACCATCCAATTTTGAGTGGTTTGGAGCTGGTAGCCCAGTTCTTCTTCTTGCCAAAATATTTTTTGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAATTCCTCCAACATTGGCAAATTTATCAAAATTGGATGTGTTGATCAAGGATGGATGTGGGACTGCTACCGCACAAGTCAAAATACTAAATTCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGAGAATAAATTTATCATCTCCACCAAGTATAGTGTTGAAGGGCCTCTTCGTATGAAAGAAGAGTATGTTGAAGGGGAATTTGAATCTCCAAAAGTCGATGAGGAAGCTGTACCTGAACAACTAAGAGGTGCTTTTGGCCAGGCATTTAATACTCTGCAACAACTTCCTGTCCCCATTAGAGATGCTGTGTCCAGTGGCATGAAAGTTTCTCTAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGGACCTTTCAGAGACTTATTCTGATTTCCTACCTTGATGACGAGATCCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E578134" ref_strand="+" ref_description="SGN-E578134 [LE08EF01]">
      <seq>ggctacttcacttcaaaatttggtaccaccattttcttgccggcgtacgacctatacatctccttgtacacctatcgccattttccgaggagggagaagaagaaatgcaagaaagatgttgagggtctgtagagctatggttgagaagacagtacaaggggcttcttctacttttgctaaggaaatggaaaggctttcagctaaagagtctctgcttcttgcattcaaagatgctggtggatttgaagcattggtcactgggaagacaacagatgtacaatgcattgatgtgaatgagaggattattagtctcgagaagctcaatccgacgcctcgtccctcaacgtctcccaatttggaaggacgatggaattttgagtggtttggagctggtagcccagttcttcttcttgccaaaatattttttgggagaattcctccaacattggcaaatttatcaaaattggatgtgttgatcaaggatggatgtgggactgctaccgcacaagtcaaaatactaaattcgattgagaataaatttatcatctccaccaagtatagtgttgaagggcctcttcgtatgaaagaagagtatgttgaaggggaatttgaatctccaaaagtcgatgaggaagctgtacctgagccactaagaggtgcttttggccaggcattttatactctgncacaacttcctgtcccattagagatgctgtgtccagtggcatgaaagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C03HBa0013A17.1" temp_strand="-" temp_description="C03HBa0013A17.1  AC238559.1 htgs_phase:2 submitted_to_sgn_as:gi|261249975|gb|AC238559.1| upload_account_name:jianfeng-ren Solanum lycopersicum chromosome 3 clone C03HBa0013a17, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces">
        <position start="22635" stop="9320"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22335" g_stop="22113" g_length="223"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="223" r_length="223" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="22112" i_stop="19780" i_length="2333">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19779" g_stop="19658" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="224" r_stop="345" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19657" i_stop="19580" i_length="78">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19579" g_stop="19496" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="346" r_stop="429" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19495" i_stop="13504" i_length="5992">
            <donor d_prob="0.912" d_score="1.00"/>
            <acceptor a_prob="0.950" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="13503" g_stop="13407" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="430" r_stop="526" r_length="97" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="13406" i_stop="9829" i_length="3578">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="9828" g_stop="9620" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="527" r_stop="734" r_length="208" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C03HBa0013A17.1" gen_strand="-" ref_id="SGN-E578134" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>735</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C03HBa0013A17.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E578134" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22335" e_stop="22113"/>
          <exon e_start="19779" e_stop="19658"/>
          <exon e_start="19579" e_stop="19496"/>
          <exon e_start="13503" e_stop="13407"/>
          <exon e_start="9828" e_stop="9620"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCTACTTCACTTCAAAATTTGGTACCACCATTTTCTTGCCGGCGTACGACCTATACATCTCCTTGTACACCTATCGCCATTTTCCGAGGAGGGAGAAGAAGAAATGCAAGAAAGATGTTGAGGGTCTGTAGAGCTATGGTTGAGAAGACAGTACAAGGGGCTTCTTCTACTTTTGCTAAGGAAATGGAAAGGCTTTCAGCTAAAGAGTCTCTGCTTCTTGCAGTTAGTGCTTATCCCTTTTTACTCCAATTTATTTGTTTTTTCCTATTTAAGTTTAAGTAACTCATTAAAATTGTGGAAAATTTGAGGGGAGTGTTAAGAGTGTCTCGCATTAGTTATGTGAATGATTTGTTGTCTTCTAATATGTTTTTGGGAAAGGCATTTCTCACCTCGCCAGCTAAATTTTTGTGTTGAAGGTCTATATTATTAACAATAGTTATGTTTATGTTTGTGTTGCTTGTTTTAATTTAAGAGTAGTTTGTAAATCCAACTTGTACTAGGTAATCATAGGTATCTATTGGGATACTCATGGACATTCTCTCTGCCACTTGTAGATTATTGTCATGTCTACTTCTTATTTAATGGCCCATTCTATTTAATAGACTTAAATGATAGAATTCACAGCAGTACATAAACAAAAGGCAATATGACCCTTAACTTGGCGATAGCGGACAATTATGAACGTCTATTATGGATGTGTACAAGTAAGCACTTAAACTTGTATAAAATTGAATAAATAGACACAATCGTCCTACATGACAATTTTGTGTCCTGTATGGCGTCCTATGTGTATTGTCCGCTGGAGCCAAGTTTAGGGTCAACTCTATGTATTATGCCTAAACAAAATAACTAAAAGAAAAATCAAGAACGGTGGTGTAGACTGACAGCAGAGATCTATTCTCTTTGTTTCATTTTACTTGACACTTTCTTTTTTAGTATGTTAAAAAGAATGACATCTTTCTATTTTTATGGAGAATTGTCATTCATGACAAGTATGGTCAAGATGACCAGTGATGTCCAAAGGTGGTTGTGAGCCCCCATGGTGTAGGAGTTTGGAAAGCAATCAGATCCCTTTGGTCTTTGATGGCTGGAAAAATTAGTTTAAGAGTGGGCAATGGAAGGAAAATTGTTCTTTTGGGGTGATAATTGACTGGGGCATGGACCTCTAAGGGAAGTCTTCCCTGAATTCTTTAGCATTGCCACTATGCCGAACATTAATTTGGAATCAGCAAAAAGAGTACAGGGATGGAATTTACTGTTAGAAGGCTACTGCATGATTGGGAGCTGGAAAGAGTTGTTGAATTTTTCCAGACCTTGAAATCATTCTAAGGGTTCAAAGATATTGAAGACTCACTTATATGGAAGCCTACCGGTATATGACCTAATTCTGTTAACTTAGCTTATAGCATTCTGATTAGGCACAGACAGTCAACTAATTAGAGTCCATGGAGATCCATTTGGAAGATGAAGGCTCCTTTTTAGGTGGTATGCTTTTCTTGGTTAGTAGCAACAAATGCTTGCCTCACACAGGATAAAGTATAAACTTCAAAAAAGGGGATTCCAACTGTGTTCTAGATGCTTTTTGTGCGGAGCTGCTAGGGAAAATAATAGTAACCTATTCATTCATTGTCCTGTTACTGGACAATTAAGACAACTATTCTTGAACATGTTAGGAATCAGATGATCAGTGCCAACAAGTGTTAATCTACTGAGATGTTGGAACCAGAATGATGGGGCAGTTAGTCAGAAAAATTGGTGGAAACTTGTCCCTGCTTGCGTATGGTTAGATCATTTAGAAGGAGCGGAACTATAGAGCTTTTGAAAGAAAAATACAATTTTGTGGCGATAATCAAGATGAACTGTATACTTTTGTTTTGTTTTTGGTGTAAAGAAATCTATGCTAAGGAGGCTGAATTACTAGTTGATATGATAGAATCCTTGTGAAGCAGTAGCCTAAGCTAAGCTTGGTTGGGATCTTGTTGTGTCTTTTGCACTGTCATCGTGCAACTTATATATATATATATATATATATATAGTTGTTGCCAGTTTCAAAGAACACACACATTTAACTTTAAACTTCTCATTTACCCTAAATAACATGATTTTGTAGGTACATAAATGTCATGACATGCTTAAGGCCACATGTTTGATAACTCTTTTTTCTTTTATAAATTTCATGTACAGTTTCACATAAAATAAGGTGGGTATTATATGTACTCTTGTCTCTTTACTTTTTTTCCTGCAATTCATAATTTTCCTTTGTTTAAATTCTTTCATTGTTTCTCTATGATTGACTCATCAAAGAATTGGCCTTGGGTAAAGTGAACGTTCTAATATATCCCATTTCCATTTGAGAAAAGGCTCAGGGAATGGTGGAAAGAGTGTCACAGGAGATACAAAGTTGTCAGGTCTGCAGGAGGGTTAACTTGGTGGAACCGAGAGGTTTAGAGAACAATATTATTGATAATATTGCAATGGTTATTTTCATGAAATTGCACTTCTGTTCTTTCTTTCTGTCCCTTAAGCACTAAAAGAAATTAATTACACTGTTATAGTTCAAAGATGCTGGTGGATTTGAAGCATTGGTCACTGGGAAGACAACAGATGTACAATGCATTGATGTGAATGAGAGGATTATTAGTCTCGAGAAGCTCAATCCGACGCCTCGTCCCTCAACGTAAGGTGTTAAATCTTACCAATAAACTTAATTTTCAAGATTCTTGACAAGGTACTCATTGGTGGTTTCATTTCCCAGGTCTCCCAATTTGGAAGGACGATGGAATTTTGAGTGGTTTGGAGCTGGTAGCCCAGTTCTTCTTCTTGCCAAAATATTTTTTGGGTAACTTCTATTTTTTGGGATAACATTCACTTCTATTTTTCCTATTCCAACTTAAACTCATTAGTGTATGAACTACGTATACGAAATGAAGTACTTGTGCAAATAATGAATCAATTCTACATGAAGTAGTTTATTCTTTTTCTGCAACCTGCATTGTGCTACTAATAAATAATTGTCATACTAGAGATCAAATGGAGACCATGTCTTCAAGGCTAACAATTTAGAGAAGAAAGTTTGAACCATGGGTATGATGGTTGCCTTCCACTATCTAAAGTGCATGCTAAATGTTTAAGCATCTAATCATTCCCTTCCATACCTTTGCACCAGTGGCAAATTAAGTGATAGTTGAGTGGGGAAATTGCACCTACTTAAATTTGATAAAATTACGCTATATACCAAAGCTTTTGCTTAGAATTTCAAATCATTCCATTTTGAACCTGATAATTTCCTAGAAAAAGTGAGAAATTGGTAGAATATTTTTATCTGAGGCTGAAATTTGATAAAATTACGCTATATGCCAGAACTTTTGCTTAGAACTTTGACTCTTTTCCATCTTTGAACCTGATAATTTCCTAGAAGAAGTCATATTGGTAGGATAGTTTTATCTGAGGTGTCTTGCATAAGGGAAAAAGTAAAATGCTAAAAGAAATGCTTTTAGCTTCTTTCATCCAACTAAAGGGCCTTCCGTTTATCTTTTCATTTTCTCTCTTTCATTTCTGATGACACAATATTTGAATTACTTTATTTTCTTACGTGCACTTGCTTTTAAGCTTAGAAGTCACAGCTAGCCCACAAAGTTGCTTGTCAGGGCCACTTTATAAAATCAACAAAATTGCTTGTCAGCTATCTTCTGGCTATATAAAATAAAAATAAAATTTATGATTTGTTTTGTGTGAATGTACTATGTATAGTTAGAAAGTTAGCCAAGATGGGTTGATATATTCATATTACTTGTATTAGTGGGAAGGTGTGTACCCAGTGAAACAGTTGAGATACGTGCAAGCTTGTTCAGATACTATGGTTATTCTCCCAAAGAATAAGAAACCCCACAAAGTGATGAGATGAATCACTCTTTTAGTCCACCAAACTAGATAAAGGTAAAGAAATAATCTTTGCTCTCACTGGGAAAAAATTCTGATTGGGAAGAAAAGGTATGGGAATAAGAAAAGAGGTCCAACCTTTTTAAGGAATGCAACCGATTTTATGACATTGAATTTTGAAATTTGGCGAAAGACCAAACTAAACCTCCATTCATGGAGGCCAATTGTTTCCCTTCAGTTAGGTCTTTACTATTTAAGTACATTATTGTCTACTAGGTATTTGCATGATTTTTCTTTTGAAGGAAAGACAACATTTACCATAATTGGTTGAAATTTCCTTCCCAAAAATTGAAAGTAAAGATCTTTCATATTTAGTTAATCTTTTTCACGGAGAAAATAATTTTGGACCTCTATAGATTGTGGTTATTTCCTTCTCACTTGGTAGCATCCACAATGCAACTATTAAAGGGGGGGGGGGGGGGTTACAGAGTTTTGGGGAGAATTTGTGAAATACAAGTTTCTATTTTGAAACTAGTAATGTTGTATTCCTCAACATTAAGGACATGTTGGAAACCTTCGAAAAAGAGAAAACAGTAATTAAAAGTATTCCCTACAAAAGTCCTAACAAATCTACAAGCTGCTTTGATCCTCTATACCTTTCCATTTGACTTTCTGAATGAAATTGTACCTATCTCCAGAGTATATACTATCCCTCTCACTCCAAGTAGTCCACTTGATGCAATGTAGAATTATCCTCCACCATTTCTTCTGGCTCTTGTTACCTCCTCTTCTGATCCAACAACTCAAAAATCTACAACATGCGTAGGAATGGTCCACTTTGTCTTTGTGAGACTGAAGAAGATTGTCCATCGTCCATCTCTTTTGTATATGTGCAGTGCAAAATAGGTCTCTGTCTGCTTCTGCATAGTATGTATCTGGATACAATATTTAACCCCCTTCTCTTCAAAACTTCATGTTGTCAAGCAATATCTCCTAGCTACCAACCATGTAAAGCATTTTACCTTCGTTGATGCTAGGTTTTTCCAAATATTCCTCCATACTTTTTGACGGTCTCTAACTTGCTGAACATTTCTTTTTTATAAGCCCTGTTTACTGTTAATACCCCCTCCTAACTGTGTTCCACCTCAAAAATGTCAGAGTCAGAAGTGGTACCTTTGAAATCCTCTATCCCTTTTAGAAAATTGGCACTCTATCCACCTTCCAGTCATTCAATAACTTGCTAAAGGATAAGTTCCATCCTTGTGGAGTCCAACATTTATTCATAGGAGCCTCAAGCGTTGTTCTGGAGAGCAAGAAGCGGAAAAAAGCGAAGAGCGCTTGCTTCACTGAAGCTGAAGCAAAGCACACATTTTTTTCTACTAAAGTGTTGTTCAGAACAAAAACAAAAAATAGTAATATGCATATATAAATAACCAAGAACTCAATAGATATAACATATTAAGCAAATCTTTCAGTTCTTAAATTAGAAAGCTTATAAAAGATGGTCAATAATCCTCATAATCATAACATATTAAGCAACTCGTAATCATAACATATTAAGCAAATGCAACATCAAAACCAAATAAGTAAATAGACAGAGCATAACAGGGGAAAGAAAACCCTAGAAGTAGTTCCTGAAAGCCTGAAAGAGAGTCCAGAGAAGACGAAGAAAAGAGATTAAGAGAGGAAGAACTTATCTTTTTGAGTCGCAGCAACAGATGTTGAAATGTTTGAGTCACAGAAGAAGAAGAAGAAGAGCGAAATGTTTAAGTCACAGCAGGCAAGTGTGTTATACAGAAGGAAAAAAAACCTAACAGCACTTAAGCACGCTTTTTGTCATCTTTGCTTTAAGCGCGCTTCAAGCTTCGCCTACTGAAGCACTCATTTTTTTAGCAGCGCCTCGCTTCAGACCATATAAGCGCAGTGCTTGCACCTCGCCTCGTTTCGCGCTTTAAGCGCGCTTTTTGTCGCTTTTCACAACACCCTAAGGATTATTTAAGGAGAAGTTCTATCTTTGTGGAGTCCAACATTAATTCATAGTAGCCTCGGGATTATTGCACAAGACAAACAGATCAGGAAAGTATTCCTTTAGAGGAGTCTGTTCATTCCAAGCATCCCTCCAAAATTTATTGTTCTATCATCTCCCACTTTAACTAACATGTTCACTTCTAACTTGGGCCACAAAGCTCTGATAGTTCTCCATACCCCAACACTTCTTATCGCTGCACCAAGGGCTGGACTCACCAAATTTGCATTTAACAACATCCTTCCATAAGGCTTGCCCTTGTCTTTTGTATCTCCATAGCCACTTCAACAGTTCCTGATGCCCAAAGCCCCCAAATCTTTGCTAAGTTTAACCAAACTAGTATTGGGAACGTACGATGCACGTTTGTCCCCTACAACTGCAAAAAATTTGGACATCGAGTGAAAGATTTATGGTGCTTTCAAAATAGAAACAATTCAATCACAATAAGTTAACTAAGATACATAGAGCCTTACAGCACGCCTCACGGGAAACCAAAGCTTGAAAACAATTTCAGGAATTAAATATGGAGAAACAAAAACTGACCTGAAAAATGCCTCTCCTACTTTCTAGGTGAGAGAGTACCCTCTGTTCGGTAGGTCACCACCAACCTCATCCTTCTCCTCAGCTATCTCCGTCTGTGATAGCTTTCTCCTTCCCTTACAGCAGTTCCCTTCCACAGACATGGAGGAAAATAGGATTTATTTCCACACCGGTTTCAAGTCATTCAATAATATCAGATGGATATCTGGGGAGGAAGCCTAGTTTGATTGGGTGGAGCTTAGTATAAACTTGATGAGAAGAATAAATCTCAGCAAAAAAATGATGGAGTGGATTTGTTTTCTCCTGGAAGAAGCCTCAAACGACAATAAGAATCTTATGAGGAGATTGAGAATGAACTATGAAGGACCAAATGGCAGAGTATTTTAGTACAAGGAAGTTTAATGCCCGCGGAAGACTACTCTTGGAGGATTGAGGCCATGAGCGTATAATTGGATTTATAAAAGTTGATTGGGTAGGATCACCCTTTTATAGATTTTCTATATCCGGATATTGTGTTTAGGAGGTCATTTGGTGGCTTAGAAGAGTAAGTAACAAAGTGTGGTTGATCTAGTGCAAAAGCAGAATACTGAGCAATAGTCATAGCAAGTTGTGAGCTAATTTAGATTAAACAGTTGCTGAGAGAACAATGATAATTGAATGAAAGAAAAACCACTGGTAGGGATATGAATGGAGTCTCGCTCAGTTAAGAGAGTTGTAGGATTCGTAAAATAGGAAAAGAGCATCTCAAAGTATGGGGCAAATGGAACTTGTGTGTGATAGCCAAATGTCCCTTCATATCACATCAAATCTGGTATTTCATCGGAGGACGAAGCACATTGAGATTGACTCTCACTTTGTCAAAGAAAGATAATCTCGGAAGATACTGTTACAAAATTTGTAAAGTTGAGTGATTAGCTTGCAAATGTCTTCACCAAGTCCCTCACCGGTCCTCGTATTAGTTACTGTTGGATATGTAGCAAGAATTGATGGGAAATAGAGGAAAGAAGAGGAATTTGAAGAGGAAAGAAGAGGAATTTGAAAAGTTTAGAACTTGAAAGGTTGGGAACTTGAAAAGTCCTCTAATGCTTTAATGAAAAAGGCAATAGTCCCTCATCGGTAATGGAAATGAAAATAGGAGAGTTTAAATAAATAAACACTCCTATTAATTGTTAAAAGGGTTGTAAAAAGGGACCCCCCTCGCGCCGTCGTCGTCGCTCGCTTCGGCGTCGGCTACGGCTTTGGCAAATGATCGAGAGATAATTTTTTGGACAAATTTATTTTAATTATTTATTTAATTAATTTAATGGCCAAAAATTATTTTCAATTAATTAGTTGATAACAGAAGTTAACCGAAATGTTTTCAACTTTTTAGTTAACCCGACCCAACTCGGATCGCGCACGTGACCCGTTTTAAATTCCGTTATATTTAAAAATTTCCGTCATGACTGTTCTGAAAGGTTGCAACTTTCAGGAACAATCAATACCATTTGAAAGTTTGCAACCTTTCATTAATGGTCGTGTCAATTCTGAAAGGGTTGCAACCTTTCAGAATATATTCTTCTTGCCTATAAATACCATTCAGTCTTCAGAATATTTTCCTCCGAATTTTCTAGATCTTCCTTCTTCTTAAAAACACATATTTCTTCGTGTACTTTCCTGCTGTGGATTGATTCGCTGACAGTAGAGTTTTTGGTATCTATACTCTACTGATTAAGATCATTTTACCTTGGGAGGTTATATTCCAAATCAAACCTCGGATACTAGAGGGGAATAATTTCCTTAAGGGGACACTGTGAATTCAGTGGACTTGATTTTCTTCCTATATTATTAAAAAAAGTATTCCAGATTCTGGTAAGTTTTAAAGATTCAATTTTTTTTTTTACCAATAAATTTCTGTTCACCTTTTTTACTGGTTCTAAAAATCTCAGTTACTTAGTGTTTCTGACTGATTTATTACAATCAGTAATTTCTGATTTTCATAACACAGATTGGCAACAGTTACATCTGTAAGAAGGTCGGTACATGTAACAAGGTCCGTACATATGACTTGTATGCACTAACTTGAGGGGGAGTGTCAAAATTGGAATATGAACAAGAATATAAATAGTATATGGAACTCTAATTGGATAAGGATTGCAATGTAGTGTCTATAAATAGGACATAGTGCAATAATGTAGAGACATAATTCAATAGTATATTTCTATTATATTTCTCATAGACACCTTTACTTGAGAGGCCTGAGCATGCATGCTTGTTCACTTTTAGTCAATATGCTAATTTCAGTTGATATCTTCTTAACATTGAGGTGAATGATCGTAGTTTTGCTTTGAGTTTAGTTTGATGAATGTCAGCTTATAATATTTCTACCGGGAACATGCTTTTACAGGAGAATTCCTCCAACATTGGCAAATTTATCAAAATTGGATGTGTTGATCAAGGATGGATGTGGGACTGCTACCGCACAAGTCAAAATACTAAATTCGGTAATTTATCTTTGTCAGGAAATTTGATATGTACATCCCATGCTCTAATATTCAGAAAATGATCTTCCTCTTCTAGTTATAGAATTGGAAATAAAACAATACTATTGTTTATGTTTTCTACAAACAAACGTCTTTGGGTTCGCAAACTAGTCATGCAGGGCAGTAACATAGGGATCGTTATGCGGTGAGTCATAGTGTAGTGATTTACTCACAGTGAGTAATAATCTATGGACTGTTCTACAATGAATAATATACAAGGATTGTCTACTTCAACAGCAGTTTTATGATCCCTAGATACTTTTTATCCAGGTATTGGTAATACAGTATTGTCATTCTACGATCTCTCCTCCATGAGATTATGTATAGTTTTCTGCATAAATTTGCCGCATTTGTATTTTTTTTTGATAACCAAATTTTTCGTTTTTGTATTTAAAAGTGCAACCTGAATTCTGCCTTAGTTATGTAGAGTTTGTACTTTGTACCGGAAACTACACATTATATTAGTTATTATGCAGAGATTATATTAATAACAGAGTTATGTGTTGCAAATCACTGTAATATTAGTTACGAGAAATTGAGATTATTACTCTTAGTTGGTCAATCAAATGCCCATGATGTGATATAACTGGTCAGCACCATATATCTTGCTTTCTTCCTCCTTTAATGCCTCACATCTGCTTGATAATTCGTACGCCAAGAGACACATTGATGGCAAGTGATGTTTTGGTCATGTTACCTAGAAAAATAGGTAGGACGAGATAACAAGCGCTAGATGTATAGCTCTATACTTTGACATTATTACAATACCAACTTATTGAAACATACGAAAACAGCTTAATAACAGAAACTTAGTAATTGAGGCCATTAACTTGCTGACAAGGTGGTAACAGTTTTACATTTACGTGTCACTTTTTAAAATCCTTATTTTGTATGACTATGTCTGTTTGGTATCTTGAATATCCTTTTGCAGCAGAAAGTAAAGCTAAGCGGAATAAAGCTGGAAGTGAATGATATAGGAAAATCTTAGCTTTACTGACTAGGGGATTAGGTACACAAACAAGATACATGCTTATTCTATCTCCAAATTTCCAGAAGTCTCTGTTCTTCAGTGTTTAGTTCACCTGTTCTCAGACTTTATTTAAGTTAAGAATTTTATGAATTTTGTGTAGCTAAAGATTTCCACAGCTAATGAGGTATCAAGAAGCTGCAATAGCAGTATTGCAATTCAAAACACAACAACAACAACAACATACCTAGTGAAATCCCACAAATTGAGGTTGTAGAGGGTAAAGTGTATGTAGACCTTATCCATACCTCGTGGCGGTAGAGATACTATTCCCGGGAGACCCTCGATTCAAGTGAAGCAGAATAAAGTAGTAATGAAAAGGAGAAACAACATTGAAGAAAACATGTCAACTAATAGGAAAGGAGTGCAGAGCATAAACATTAACAAAATAGTGCAATCACCTAAACATAATAAACAACAGATTGTAACAGATAACAAAAGCAAGAAACTACATGTATAAGAGTATTTATTGTGACAAACATGGTGCGCCAGAGTCCAGACTACTACCAAACCTAATCTCGTCAAAAATCAAGAAAACCCTCGACTACCTACTAACCTTCTACCCTAATCCATGACCTCCATACCTGCCTATCTAAGGTCGTGTCTTTAGTAAGCTAAAGTTGTAGCATGTCCTGTATAATCGCAATCTACCTAATACTTCTTCAGCCTACCTCTACCTCTCCTCATATCCACTATATCCAACCTCTCGCACCTTCCTTCACTAGGGCATCGACACATCTCTTCTTCAAATGTCCAAACCATCTTGGTCTTCCTTCCTCATCTTGTCCACCACAGAGGTCACTCTCACCTCTTCCCAGATACCCTCATTCTTAATCTTATCACTCCTAGTATGCCCACACTTAAATGTTATTTTAGTTACAAGCTCAAATTCTAGACTTGCATACAGTTCCCAAAAGAAAAGAAAAGAAATTCAACATCAATAGTACCGGATATTATCATATCATATTATATTATAAGTGGAAGCTCCAAGATGTAAAGTTGAATTACCATTTTATCCCTATACTAAATAAAAATGTTATATTCATATTTGATTATTTTGTTTTTGAAAAATATTGAGCAGTAAACGTTTTTTACTATTAATGAATTGAGAATATTTGAACAGTTATGAAAATTAAATAATCTAAACGTTAAAGAAAATGAAGAGACAAATGTTAGTTAATGAGAGCAAATAGGTAGAGATTTAAGTTGCACATTAACTAAAATATAGAAGCAGTTACCTTTACATTGCTAGAATCTTAAAAGTTGTAAATTTCAATACAATGAATCTCATAGTTAATTTATTAATATATGTTATTTTCAATGATAAATACATGAAAAGAAGCTAAAGAGACTAATTAATCATTTAAAGTGAAAGTATTATATAAAGCCAAGAATAGTTTTCATTTTCCTCAAGTTCCCTCTCCATTTTTATGGGCTCTAAAGAAGAGTATATCATTTCTCTGAGCAGTATTTTCTCAATCAATGTCAAAGTTAAAGGCTATTAAAATACGCTATGAGAGTTGTTGGATTTGTGCAAGAATTTCAGCTATGAATGTTGTTGGATTCATCAAAGAAATTTCTTAGTGAAGAATGCACTTATGACACTTATTATTTAATTTCCTTGTTAGGGCTTAATATATGCAACACACAACATTAATTTTACGGTAAAAGATTTCTATATGTTACTGATTTTACACATTTCATTAACGTAGCACATAAAATTTCACTTATTCAATTAAATATTGTAGTTGTATAGTTTTTTGGATTTTGGATCTTAGAAACAAAAACACCAGGATGCTTATCAATTTTAAGAACATGTAATTTGTATTTTCTATTTTATAACACATAATATAACTAAAAAATATTGCTAATCTACAATCTTCACAAAAATATTTTTTATGTATATGGCCACATGCACGTGGCGCGTACCCAGAAACTAGTTAACATAAGGAGGAGAAGATGAACAAAGTGTTAGGTCTTGATAAGCTATAAATAAAAAGCTTATGATGGTGTTAACAATGCTAGCTTGATCCACCTCGACTATTTCACCAGGAACCTACTACCTCCAACCAGCAGGTATCTGGTACTTCCTGCTCACCAAGGTTTAGACAAATAGAAAGAAAGCACCTCACTATTAAAAACTCAAAATGAGAAGTGTTTAAATAAGTTAGGGTCAACATTACTTAATATTCTTATTTTGATGAGGCAAAAGTGAATTGGGGCCTGTTCATGTGTTGATTCTTGATTTGCACTCAGTTTGAAACTTAAGAGGCTCATGCTCAGTTGCCTCATTATCACTTAGGCCTTGACCCCTGCTTCTTCAGGCTGGTAATTAGCTCTAGGCTGGTCAATATCAGTTGAGTTGTATTCTTCATATTGAGTCTTACACAAGGACTCAAGGTGTTGCATCTTTCAATTTATCGGTTGAGGTTTTTGTGAAATGTTAATGATATTATTAGTATATCTGATCATATGTATCTGAAGAGGTGAAATACTTTTTTGTGAAATGCAGATTGAGAATAAATTTATCATCTCCACCAAGTATAGTGTTGAAGGGCCTCTTCGTATGAAAGAAGAGTATGTTGAAGGGGAATTTGAATCTCCAAAAGTCGATGAGGAAGCTGTACCTGAACAACTAAGAGGTGCTTTTGGCCAGGCATTTAATACTCTGCAACAACTTCCTGTCCCCATTAGAGATGCTGTGTCCAGTGGCATGAAAGT</genome_strand>
        <mrna_strand>GGCTACTTCACTTCAAAATTTGGTACCACCATTTTCTTGCCGGCGTACGACCTATACATCTCCTTGTACACCTATCGCCATTTTCCGAGGAGGGAGAAGAAGAAATGCAAGAAAGATGTTGAGGGTCTGTAGAGCTATGGTTGAGAAGACAGTACAAGGGGCTTCTTCTACTTTTGCTAAGGAAATGGAAAGGCTTTCAGCTAAAGAGTCTCTGCTTCTTGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAAAGATGCTGGTGGATTTGAAGCATTGGTCACTGGGAAGACAACAGATGTACAATGCATTGATGTGAATGAGAGGATTATTAGTCTCGAGAAGCTCAATCCGACGCCTCGTCCCTCAAC..............................................................................GTCTCCCAATTTGGAAGGACGATGGAATTTTGAGTGGTTTGGAGCTGGTAGCCCAGTTCTTCTTCTTGCCAAAATATTTTTTGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................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........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGAGAATAAATTTATCATCTCCACCAAGTATAGTGTTGAAGGGCCTCTTCGTATGAAAGAAGAGTATGTTGAAGGGGAATTTGAATCTCCAAAAGTCGATGAGGAAGCTGTACCTGAGCCACTAAGAGGTGCTTTTGGCCAGGCATTTTATACTCTGNCACAACTTCCTGT-CCCATTAGAGATGCTGTGTCCAGTGGCATGAAAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E322984" ref_strand="+" ref_description="SGN-E322984 [cTOB-30-L3]">
      <seq>ttgtacacctatcgccattttccgaggagggagaagaagaaatgcaagaaagatgttgagggtctgtagagctatggttgagaagacagtacaaggggcttcttctacttttgctaaggaaatggaaaggctttcagctaaagagtctctgcttcttgcattcaaagatgctggtggatttgaagcattggtcactgggaagacaacagatgtacaatgcattgatgtgaatgagaggattattagtctcgagaagctcaatccgacgcctcgtccctcaacgtctcccaatttggaaggacgatggaattttgagtggtttggagctggtagcccagttcttcttcttgccaaaatattttttgggagaattcctccaacattggcaaatttatcaaaattggatgtgttgatcaaggatggatgtgggactgctaccgcacaagtcaaaatactaaattcgattgacaataaatttatcctctcccaccaagtatagtgttgaaggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C03HBa0013A17.1" temp_strand="-" temp_description="C03HBa0013A17.1  AC238559.1 htgs_phase:2 submitted_to_sgn_as:gi|261249975|gb|AC238559.1| upload_account_name:jianfeng-ren Solanum lycopersicum chromosome 3 clone C03HBa0013a17, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces">
        <position start="22572" stop="9484"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22272" g_stop="22113" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="160" r_length="160" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="22112" i_stop="19780" i_length="2333">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19779" g_stop="19658" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="161" r_stop="282" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19657" i_stop="19580" i_length="78">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19579" g_stop="19496" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="283" r_stop="366" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19495" i_stop="13504" i_length="5992">
            <donor d_prob="0.912" d_score="1.00"/>
            <acceptor a_prob="0.950" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="13503" g_stop="13407" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="367" r_stop="463" r_length="97" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="13406" i_stop="9829" i_length="3578">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.91"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="9828" g_stop="9784" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="464" r_stop="509" r_length="46" r_score="0.911"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C03HBa0013A17.1" gen_strand="-" ref_id="SGN-E322984" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>508</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C03HBa0013A17.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E322984" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22272" e_stop="22113"/>
          <exon e_start="19779" e_stop="19658"/>
          <exon e_start="19579" e_stop="19496"/>
          <exon e_start="13503" e_stop="13407"/>
          <exon e_start="9828" e_stop="9784"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTACACCTATCGCCATTTTCCGAGGAGGGAGAAGAAGAAATGCAAGAAAGATGTTGAGGGTCTGTAGAGCTATGGTTGAGAAGACAGTACAAGGGGCTTCTTCTACTTTTGCTAAGGAAATGGAAAGGCTTTCAGCTAAAGAGTCTCTGCTTCTTGCAGTTAGTGCTTATCCCTTTTTACTCCAATTTATTTGTTTTTTCCTATTTAAGTTTAAGTAACTCATTAAAATTGTGGAAAATTTGAGGGGAGTGTTAAGAGTGTCTCGCATTAGTTATGTGAATGATTTGTTGTCTTCTAATATGTTTTTGGGAAAGGCATTTCTCACCTCGCCAGCTAAATTTTTGTGTTGAAGGTCTATATTATTAACAATAGTTATGTTTATGTTTGTGTTGCTTGTTTTAATTTAAGAGTAGTTTGTAAATCCAACTTGTACTAGGTAATCATAGGTATCTATTGGGATACTCATGGACATTCTCTCTGCCACTTGTAGATTATTGTCATGTCTACTTCTTATTTAATGGCCCATTCTATTTAATAGACTTAAATGATAGAATTCACAGCAGTACATAAACAAAAGGCAATATGACCCTTAACTTGGCGATAGCGGACAATTATGAACGTCTATTATGGATGTGTACAAGTAAGCACTTAAACTTGTATAAAATTGAATAAATAGACACAATCGTCCTACATGACAATTTTGTGTCCTGTATGGCGTCCTATGTGTATTGTCCGCTGGAGCCAAGTTTAGGGTCAACTCTATGTATTATGCCTAAACAAAATAACTAAAAGAAAAATCAAGAACGGTGGTGTAGACTGACAGCAGAGATCTATTCTCTTTGTTTCATTTTACTTGACACTTTCTTTTTTAGTATGTTAAAAAGAATGACATCTTTCTATTTTTATGGAGAATTGTCATTCATGACAAGTATGGTCAAGATGACCAGTGATGTCCAAAGGTGGTTGTGAGCCCCCATGGTGTAGGAGTTTGGAAAGCAATCAGATCCCTTTGGTCTTTGATGGCTGGAAAAATTAGTTTAAGAGTGGGCAATGGAAGGAAAATTGTTCTTTTGGGGTGATAATTGACTGGGGCATGGACCTCTAAGGGAAGTCTTCCCTGAATTCTTTAGCATTGCCACTATGCCGAACATTAATTTGGAATCAGCAAAAAGAGTACAGGGATGGAATTTACTGTTAGAAGGCTACTGCATGATTGGGAGCTGGAAAGAGTTGTTGAATTTTTCCAGACCTTGAAATCATTCTAAGGGTTCAAAGATATTGAAGACTCACTTATATGGAAGCCTACCGGTATATGACCTAATTCTGTTAACTTAGCTTATAGCATTCTGATTAGGCACAGACAGTCAACTAATTAGAGTCCATGGAGATCCATTTGGAAGATGAAGGCTCCTTTTTAGGTGGTATGCTTTTCTTGGTTAGTAGCAACAAATGCTTGCCTCACACAGGATAAAGTATAAACTTCAAAAAAGGGGATTCCAACTGTGTTCTAGATGCTTTTTGTGCGGAGCTGCTAGGGAAAATAATAGTAACCTATTCATTCATTGTCCTGTTACTGGACAATTAAGACAACTATTCTTGAACATGTTAGGAATCAGATGATCAGTGCCAACAAGTGTTAATCTACTGAGATGTTGGAACCAGAATGATGGGGCAGTTAGTCAGAAAAATTGGTGGAAACTTGTCCCTGCTTGCGTATGGTTAGATCATTTAGAAGGAGCGGAACTATAGAGCTTTTGAAAGAAAAATACAATTTTGTGGCGATAATCAAGATGAACTGTATACTTTTGTTTTGTTTTTGGTGTAAAGAAATCTATGCTAAGGAGGCTGAATTACTAGTTGATATGATAGAATCCTTGTGAAGCAGTAGCCTAAGCTAAGCTTGGTTGGGATCTTGTTGTGTCTTTTGCACTGTCATCGTGCAACTTATATATATATATATATATATATATAGTTGTTGCCAGTTTCAAAGAACACACACATTTAACTTTAAACTTCTCATTTACCCTAAATAACATGATTTTGTAGGTACATAAATGTCATGACATGCTTAAGGCCACATGTTTGATAACTCTTTTTTCTTTTATAAATTTCATGTACAGTTTCACATAAAATAAGGTGGGTATTATATGTACTCTTGTCTCTTTACTTTTTTTCCTGCAATTCATAATTTTCCTTTGTTTAAATTCTTTCATTGTTTCTCTATGATTGACTCATCAAAGAATTGGCCTTGGGTAAAGTGAACGTTCTAATATATCCCATTTCCATTTGAGAAAAGGCTCAGGGAATGGTGGAAAGAGTGTCACAGGAGATACAAAGTTGTCAGGTCTGCAGGAGGGTTAACTTGGTGGAACCGAGAGGTTTAGAGAACAATATTATTGATAATATTGCAATGGTTATTTTCATGAAATTGCACTTCTGTTCTTTCTTTCTGTCCCTTAAGCACTAAAAGAAATTAATTACACTGTTATAGTTCAAAGATGCTGGTGGATTTGAAGCATTGGTCACTGGGAAGACAACAGATGTACAATGCATTGATGTGAATGAGAGGATTATTAGTCTCGAGAAGCTCAATCCGACGCCTCGTCCCTCAACGTAAGGTGTTAAATCTTACCAATAAACTTAATTTTCAAGATTCTTGACAAGGTACTCATTGGTGGTTTCATTTCCCAGGTCTCCCAATTTGGAAGGACGATGGAATTTTGAGTGGTTTGGAGCTGGTAGCCCAGTTCTTCTTCTTGCCAAAATATTTTTTGGGTAACTTCTATTTTTTGGGATAACATTCACTTCTATTTTTCCTATTCCAACTTAAACTCATTAGTGTATGAACTACGTATACGAAATGAAGTACTTGTGCAAATAATGAATCAATTCTACATGAAGTAGTTTATTCTTTTTCTGCAACCTGCATTGTGCTACTAATAAATAATTGTCATACTAGAGATCAAATGGAGACCATGTCTTCAAGGCTAACAATTTAGAGAAGAAAGTTTGAACCATGGGTATGATGGTTGCCTTCCACTATCTAAAGTGCATGCTAAATGTTTAAGCATCTAATCATTCCCTTCCATACCTTTGCACCAGTGGCAAATTAAGTGATAGTTGAGTGGGGAAATTGCACCTACTTAAATTTGATAAAATTACGCTATATACCAAAGCTTTTGCTTAGAATTTCAAATCATTCCATTTTGAACCTGATAATTTCCTAGAAAAAGTGAGAAATTGGTAGAATATTTTTATCTGAGGCTGAAATTTGATAAAATTACGCTATATGCCAGAACTTTTGCTTAGAACTTTGACTCTTTTCCATCTTTGAACCTGATAATTTCCTAGAAGAAGTCATATTGGTAGGATAGTTTTATCTGAGGTGTCTTGCATAAGGGAAAAAGTAAAATGCTAAAAGAAATGCTTTTAGCTTCTTTCATCCAACTAAAGGGCCTTCCGTTTATCTTTTCATTTTCTCTCTTTCATTTCTGATGACACAATATTTGAATTACTTTATTTTCTTACGTGCACTTGCTTTTAAGCTTAGAAGTCACAGCTAGCCCACAAAGTTGCTTGTCAGGGCCACTTTATAAAATCAACAAAATTGCTTGTCAGCTATCTTCTGGCTATATAAAATAAAAATAAAATTTATGATTTGTTTTGTGTGAATGTACTATGTATAGTTAGAAAGTTAGCCAAGATGGGTTGATATATTCATATTACTTGTATTAGTGGGAAGGTGTGTACCCAGTGAAACAGTTGAGATACGTGCAAGCTTGTTCAGATACTATGGTTATTCTCCCAAAGAATAAGAAACCCCACAAAGTGATGAGATGAATCACTCTTTTAGTCCACCAAACTAGATAAAGGTAAAGAAATAATCTTTGCTCTCACTGGGAAAAAATTCTGATTGGGAAGAAAAGGTATGGGAATAAGAAAAGAGGTCCAACCTTTTTAAGGAATGCAACCGATTTTATGACATTGAATTTTGAAATTTGGCGAAAGACCAAACTAAACCTCCATTCATGGAGGCCAATTGTTTCCCTTCAGTTAGGTCTTTACTATTTAAGTACATTATTGTCTACTAGGTATTTGCATGATTTTTCTTTTGAAGGAAAGACAACATTTACCATAATTGGTTGAAATTTCCTTCCCAAAAATTGAAAGTAAAGATCTTTCATATTTAGTTAATCTTTTTCACGGAGAAAATAATTTTGGACCTCTATAGATTGTGGTTATTTCCTTCTCACTTGGTAGCATCCACAATGCAACTATTAAAGGGGGGGGGGGGGGGTTACAGAGTTTTGGGGAGAATTTGTGAAATACAAGTTTCTATTTTGAAACTAGTAATGTTGTATTCCTCAACATTAAGGACATGTTGGAAACCTTCGAAAAAGAGAAAACAGTAATTAAAAGTATTCCCTACAAAAGTCCTAACAAATCTACAAGCTGCTTTGATCCTCTATACCTTTCCATTTGACTTTCTGAATGAAATTGTACCTATCTCCAGAGTATATACTATCCCTCTCACTCCAAGTAGTCCACTTGATGCAATGTAGAATTATCCTCCACCATTTCTTCTGGCTCTTGTTACCTCCTCTTCTGATCCAACAACTCAAAAATCTACAACATGCGTAGGAATGGTCCACTTTGTCTTTGTGAGACTGAAGAAGATTGTCCATCGTCCATCTCTTTTGTATATGTGCAGTGCAAAATAGGTCTCTGTCTGCTTCTGCATAGTATGTATCTGGATACAATATTTAACCCCCTTCTCTTCAAAACTTCATGTTGTCAAGCAATATCTCCTAGCTACCAACCATGTAAAGCATTTTACCTTCGTTGATGCTAGGTTTTTCCAAATATTCCTCCATACTTTTTGACGGTCTCTAACTTGCTGAACATTTCTTTTTTATAAGCCCTGTTTACTGTTAATACCCCCTCCTAACTGTGTTCCACCTCAAAAATGTCAGAGTCAGAAGTGGTACCTTTGAAATCCTCTATCCCTTTTAGAAAATTGGCACTCTATCCACCTTCCAGTCATTCAATAACTTGCTAAAGGATAAGTTCCATCCTTGTGGAGTCCAACATTTATTCATAGGAGCCTCAAGCGTTGTTCTGGAGAGCAAGAAGCGGAAAAAAGCGAAGAGCGCTTGCTTCACTGAAGCTGAAGCAAAGCACACATTTTTTTCTACTAAAGTGTTGTTCAGAACAAAAACAAAAAATAGTAATATGCATATATAAATAACCAAGAACTCAATAGATATAACATATTAAGCAAATCTTTCAGTTCTTAAATTAGAAAGCTTATAAAAGATGGTCAATAATCCTCATAATCATAACATATTAAGCAACTCGTAATCATAACATATTAAGCAAATGCAACATCAAAACCAAATAAGTAAATAGACAGAGCATAACAGGGGAAAGAAAACCCTAGAAGTAGTTCCTGAAAGCCTGAAAGAGAGTCCAGAGAAGACGAAGAAAAGAGATTAAGAGAGGAAGAACTTATCTTTTTGAGTCGCAGCAACAGATGTTGAAATGTTTGAGTCACAGAAGAAGAAGAAGAAGAGCGAAATGTTTAAGTCACAGCAGGCAAGTGTGTTATACAGAAGGAAAAAAAACCTAACAGCACTTAAGCACGCTTTTTGTCATCTTTGCTTTAAGCGCGCTTCAAGCTTCGCCTACTGAAGCACTCATTTTTTTAGCAGCGCCTCGCTTCAGACCATATAAGCGCAGTGCTTGCACCTCGCCTCGTTTCGCGCTTTAAGCGCGCTTTTTGTCGCTTTTCACAACACCCTAAGGATTATTTAAGGAGAAGTTCTATCTTTGTGGAGTCCAACATTAATTCATAGTAGCCTCGGGATTATTGCACAAGACAAACAGATCAGGAAAGTATTCCTTTAGAGGAGTCTGTTCATTCCAAGCATCCCTCCAAAATTTATTGTTCTATCATCTCCCACTTTAACTAACATGTTCACTTCTAACTTGGGCCACAAAGCTCTGATAGTTCTCCATACCCCAACACTTCTTATCGCTGCACCAAGGGCTGGACTCACCAAATTTGCATTTAACAACATCCTTCCATAAGGCTTGCCCTTGTCTTTTGTATCTCCATAGCCACTTCAACAGTTCCTGATGCCCAAAGCCCCCAAATCTTTGCTAAGTTTAACCAAACTAGTATTGGGAACGTACGATGCACGTTTGTCCCCTACAACTGCAAAAAATTTGGACATCGAGTGAAAGATTTATGGTGCTTTCAAAATAGAAACAATTCAATCACAATAAGTTAACTAAGATACATAGAGCCTTACAGCACGCCTCACGGGAAACCAAAGCTTGAAAACAATTTCAGGAATTAAATATGGAGAAACAAAAACTGACCTGAAAAATGCCTCTCCTACTTTCTAGGTGAGAGAGTACCCTCTGTTCGGTAGGTCACCACCAACCTCATCCTTCTCCTCAGCTATCTCCGTCTGTGATAGCTTTCTCCTTCCCTTACAGCAGTTCCCTTCCACAGACATGGAGGAAAATAGGATTTATTTCCACACCGGTTTCAAGTCATTCAATAATATCAGATGGATATCTGGGGAGGAAGCCTAGTTTGATTGGGTGGAGCTTAGTATAAACTTGATGAGAAGAATAAATCTCAGCAAAAAAATGATGGAGTGGATTTGTTTTCTCCTGGAAGAAGCCTCAAACGACAATAAGAATCTTATGAGGAGATTGAGAATGAACTATGAAGGACCAAATGGCAGAGTATTTTAGTACAAGGAAGTTTAATGCCCGCGGAAGACTACTCTTGGAGGATTGAGGCCATGAGCGTATAATTGGATTTATAAAAGTTGATTGGGTAGGATCACCCTTTTATAGATTTTCTATATCCGGATATTGTGTTTAGGAGGTCATTTGGTGGCTTAGAAGAGTAAGTAACAAAGTGTGGTTGATCTAGTGCAAAAGCAGAATACTGAGCAATAGTCATAGCAAGTTGTGAGCTAATTTAGATTAAACAGTTGCTGAGAGAACAATGATAATTGAATGAAAGAAAAACCACTGGTAGGGATATGAATGGAGTCTCGCTCAGTTAAGAGAGTTGTAGGATTCGTAAAATAGGAAAAGAGCATCTCAAAGTATGGGGCAAATGGAACTTGTGTGTGATAGCCAAATGTCCCTTCATATCACATCAAATCTGGTATTTCATCGGAGGACGAAGCACATTGAGATTGACTCTCACTTTGTCAAAGAAAGATAATCTCGGAAGATACTGTTACAAAATTTGTAAAGTTGAGTGATTAGCTTGCAAATGTCTTCACCAAGTCCCTCACCGGTCCTCGTATTAGTTACTGTTGGATATGTAGCAAGAATTGATGGGAAATAGAGGAAAGAAGAGGAATTTGAAGAGGAAAGAAGAGGAATTTGAAAAGTTTAGAACTTGAAAGGTTGGGAACTTGAAAAGTCCTCTAATGCTTTAATGAAAAAGGCAATAGTCCCTCATCGGTAATGGAAATGAAAATAGGAGAGTTTAAATAAATAAACACTCCTATTAATTGTTAAAAGGGTTGTAAAAAGGGACCCCCCTCGCGCCGTCGTCGTCGCTCGCTTCGGCGTCGGCTACGGCTTTGGCAAATGATCGAGAGATAATTTTTTGGACAAATTTATTTTAATTATTTATTTAATTAATTTAATGGCCAAAAATTATTTTCAATTAATTAGTTGATAACAGAAGTTAACCGAAATGTTTTCAACTTTTTAGTTAACCCGACCCAACTCGGATCGCGCACGTGACCCGTTTTAAATTCCGTTATATTTAAAAATTTCCGTCATGACTGTTCTGAAAGGTTGCAACTTTCAGGAACAATCAATACCATTTGAAAGTTTGCAACCTTTCATTAATGGTCGTGTCAATTCTGAAAGGGTTGCAACCTTTCAGAATATATTCTTCTTGCCTATAAATACCATTCAGTCTTCAGAATATTTTCCTCCGAATTTTCTAGATCTTCCTTCTTCTTAAAAACACATATTTCTTCGTGTACTTTCCTGCTGTGGATTGATTCGCTGACAGTAGAGTTTTTGGTATCTATACTCTACTGATTAAGATCATTTTACCTTGGGAGGTTATATTCCAAATCAAACCTCGGATACTAGAGGGGAATAATTTCCTTAAGGGGACACTGTGAATTCAGTGGACTTGATTTTCTTCCTATATTATTAAAAAAAGTATTCCAGATTCTGGTAAGTTTTAAAGATTCAATTTTTTTTTTTACCAATAAATTTCTGTTCACCTTTTTTACTGGTTCTAAAAATCTCAGTTACTTAGTGTTTCTGACTGATTTATTACAATCAGTAATTTCTGATTTTCATAACACAGATTGGCAACAGTTACATCTGTAAGAAGGTCGGTACATGTAACAAGGTCCGTACATATGACTTGTATGCACTAACTTGAGGGGGAGTGTCAAAATTGGAATATGAACAAGAATATAAATAGTATATGGAACTCTAATTGGATAAGGATTGCAATGTAGTGTCTATAAATAGGACATAGTGCAATAATGTAGAGACATAATTCAATAGTATATTTCTATTATATTTCTCATAGACACCTTTACTTGAGAGGCCTGAGCATGCATGCTTGTTCACTTTTAGTCAATATGCTAATTTCAGTTGATATCTTCTTAACATTGAGGTGAATGATCGTAGTTTTGCTTTGAGTTTAGTTTGATGAATGTCAGCTTATAATATTTCTACCGGGAACATGCTTTTACAGGAGAATTCCTCCAACATTGGCAAATTTATCAAAATTGGATGTGTTGATCAAGGATGGATGTGGGACTGCTACCGCACAAGTCAAAATACTAAATTCGGTAATTTATCTTTGTCAGGAAATTTGATATGTACATCCCATGCTCTAATATTCAGAAAATGATCTTCCTCTTCTAGTTATAGAATTGGAAATAAAACAATACTATTGTTTATGTTTTCTACAAACAAACGTCTTTGGGTTCGCAAACTAGTCATGCAGGGCAGTAACATAGGGATCGTTATGCGGTGAGTCATAGTGTAGTGATTTACTCACAGTGAGTAATAATCTATGGACTGTTCTACAATGAATAATATACAAGGATTGTCTACTTCAACAGCAGTTTTATGATCCCTAGATACTTTTTATCCAGGTATTGGTAATACAGTATTGTCATTCTACGATCTCTCCTCCATGAGATTATGTATAGTTTTCTGCATAAATTTGCCGCATTTGTATTTTTTTTTGATAACCAAATTTTTCGTTTTTGTATTTAAAAGTGCAACCTGAATTCTGCCTTAGTTATGTAGAGTTTGTACTTTGTACCGGAAACTACACATTATATTAGTTATTATGCAGAGATTATATTAATAACAGAGTTATGTGTTGCAAATCACTGTAATATTAGTTACGAGAAATTGAGATTATTACTCTTAGTTGGTCAATCAAATGCCCATGATGTGATATAACTGGTCAGCACCATATATCTTGCTTTCTTCCTCCTTTAATGCCTCACATCTGCTTGATAATTCGTACGCCAAGAGACACATTGATGGCAAGTGATGTTTTGGTCATGTTACCTAGAAAAATAGGTAGGACGAGATAACAAGCGCTAGATGTATAGCTCTATACTTTGACATTATTACAATACCAACTTATTGAAACATACGAAAACAGCTTAATAACAGAAACTTAGTAATTGAGGCCATTAACTTGCTGACAAGGTGGTAACAGTTTTACATTTACGTGTCACTTTTTAAAATCCTTATTTTGTATGACTATGTCTGTTTGGTATCTTGAATATCCTTTTGCAGCAGAAAGTAAAGCTAAGCGGAATAAAGCTGGAAGTGAATGATATAGGAAAATCTTAGCTTTACTGACTAGGGGATTAGGTACACAAACAAGATACATGCTTATTCTATCTCCAAATTTCCAGAAGTCTCTGTTCTTCAGTGTTTAGTTCACCTGTTCTCAGACTTTATTTAAGTTAAGAATTTTATGAATTTTGTGTAGCTAAAGATTTCCACAGCTAATGAGGTATCAAGAAGCTGCAATAGCAGTATTGCAATTCAAAACACAACAACAACAACAACATACCTAGTGAAATCCCACAAATTGAGGTTGTAGAGGGTAAAGTGTATGTAGACCTTATCCATACCTCGTGGCGGTAGAGATACTATTCCCGGGAGACCCTCGATTCAAGTGAAGCAGAATAAAGTAGTAATGAAAAGGAGAAACAACATTGAAGAAAACATGTCAACTAATAGGAAAGGAGTGCAGAGCATAAACATTAACAAAATAGTGCAATCACCTAAACATAATAAACAACAGATTGTAACAGATAACAAAAGCAAGAAACTACATGTATAAGAGTATTTATTGTGACAAACATGGTGCGCCAGAGTCCAGACTACTACCAAACCTAATCTCGTCAAAAATCAAGAAAACCCTCGACTACCTACTAACCTTCTACCCTAATCCATGACCTCCATACCTGCCTATCTAAGGTCGTGTCTTTAGTAAGCTAAAGTTGTAGCATGTCCTGTATAATCGCAATCTACCTAATACTTCTTCAGCCTACCTCTACCTCTCCTCATATCCACTATATCCAACCTCTCGCACCTTCCTTCACTAGGGCATCGACACATCTCTTCTTCAAATGTCCAAACCATCTTGGTCTTCCTTCCTCATCTTGTCCACCACAGAGGTCACTCTCACCTCTTCCCAGATACCCTCATTCTTAATCTTATCACTCCTAGTATGCCCACACTTAAATGTTATTTTAGTTACAAGCTCAAATTCTAGACTTGCATACAGTTCCCAAAAGAAAAGAAAAGAAATTCAACATCAATAGTACCGGATATTATCATATCATATTATATTATAAGTGGAAGCTCCAAGATGTAAAGTTGAATTACCATTTTATCCCTATACTAAATAAAAATGTTATATTCATATTTGATTATTTTGTTTTTGAAAAATATTGAGCAGTAAACGTTTTTTACTATTAATGAATTGAGAATATTTGAACAGTTATGAAAATTAAATAATCTAAACGTTAAAGAAAATGAAGAGACAAATGTTAGTTAATGAGAGCAAATAGGTAGAGATTTAAGTTGCACATTAACTAAAATATAGAAGCAGTTACCTTTACATTGCTAGAATCTTAAAAGTTGTAAATTTCAATACAATGAATCTCATAGTTAATTTATTAATATATGTTATTTTCAATGATAAATACATGAAAAGAAGCTAAAGAGACTAATTAATCATTTAAAGTGAAAGTATTATATAAAGCCAAGAATAGTTTTCATTTTCCTCAAGTTCCCTCTCCATTTTTATGGGCTCTAAAGAAGAGTATATCATTTCTCTGAGCAGTATTTTCTCAATCAATGTCAAAGTTAAAGGCTATTAAAATACGCTATGAGAGTTGTTGGATTTGTGCAAGAATTTCAGCTATGAATGTTGTTGGATTCATCAAAGAAATTTCTTAGTGAAGAATGCACTTATGACACTTATTATTTAATTTCCTTGTTAGGGCTTAATATATGCAACACACAACATTAATTTTACGGTAAAAGATTTCTATATGTTACTGATTTTACACATTTCATTAACGTAGCACATAAAATTTCACTTATTCAATTAAATATTGTAGTTGTATAGTTTTTTGGATTTTGGATCTTAGAAACAAAAACACCAGGATGCTTATCAATTTTAAGAACATGTAATTTGTATTTTCTATTTTATAACACATAATATAACTAAAAAATATTGCTAATCTACAATCTTCACAAAAATATTTTTTATGTATATGGCCACATGCACGTGGCGCGTACCCAGAAACTAGTTAACATAAGGAGGAGAAGATGAACAAAGTGTTAGGTCTTGATAAGCTATAAATAAAAAGCTTATGATGGTGTTAACAATGCTAGCTTGATCCACCTCGACTATTTCACCAGGAACCTACTACCTCCAACCAGCAGGTATCTGGTACTTCCTGCTCACCAAGGTTTAGACAAATAGAAAGAAAGCACCTCACTATTAAAAACTCAAAATGAGAAGTGTTTAAATAAGTTAGGGTCAACATTACTTAATATTCTTATTTTGATGAGGCAAAAGTGAATTGGGGCCTGTTCATGTGTTGATTCTTGATTTGCACTCAGTTTGAAACTTAAGAGGCTCATGCTCAGTTGCCTCATTATCACTTAGGCCTTGACCCCTGCTTCTTCAGGCTGGTAATTAGCTCTAGGCTGGTCAATATCAGTTGAGTTGTATTCTTCATATTGAGTCTTACACAAGGACTCAAGGTGTTGCATCTTTCAATTTATCGGTTGAGGTTTTTGTGAAATGTTAATGATATTATTAGTATATCTGATCATATGTATCTGAAGAGGTGAAATACTTTTTTGTGAAATGCAGATTGAGAATAAATTTATCATCT-CCACCAAGTATAGTGTTGAAGGG</genome_strand>
        <mrna_strand>TTGTACACCTATCGCCATTTTCCGAGGAGGGAGAAGAAGAAATGCAAGAAAGATGTTGAGGGTCTGTAGAGCTATGGTTGAGAAGACAGTACAAGGGGCTTCTTCTACTTTTGCTAAGGAAATGGAAAGGCTTTCAGCTAAAGAGTCTCTGCTTCTTGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAAAGATGCTGGTGGATTTGAAGCATTGGTCACTGGGAAGACAACAGATGTACAATGCATTGATGTGAATGAGAGGATTATTAGTCTCGAGAAGCTCAATCCGACGCCTCGTCCCTCAAC..............................................................................GTCTCCCAATTTGGAAGGACGATGGAATTTTGAGTGGTTTGGAGCTGGTAGCCCAGTTCTTCTTCTTGCCAAAATATTTTTTGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................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.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGACAATAAATTTATCCTCTCCCACCAAGTATAGTGTTGAAGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E319001" ref_strand="+" ref_description="SGN-E319001 [cTOB-14-H22]">
      <seq>gctacttcacttcaaaatttggtaccaccattttcttgccggcgtacgacctatacatctccttgtacacctatcgccattttccgaggagggagaagaagaaatgcaagaaagatgttgagggtctgtagagctatggttgagaagacagtacaaggggcttcttctacttttgctaaggaaatggaaaggctttcagctaaagagtctctgcttcttgcattcaaagatgctggtggatttgaagcattggtcactgggaagacaacagatgtacaatgcattgatgtgaatgagaggattattactctcgagaagctcaatccgacgcctcgtccctcaacgtctcccaatttggaaggacgatggaattttgagtggtttggagctggtagcccagttcttcttcttgccaaaatattttttgggagaattcctccaacattggcaaatttatcaaaattggatgtgttgatcaaggatggatgtgggactgctaccgcacaagtcaaaatactaaattcgattgagaataaatttatcatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C03HBa0013A17.1" temp_strand="-" temp_description="C03HBa0013A17.1  AC238559.1 htgs_phase:2 submitted_to_sgn_as:gi|261249975|gb|AC238559.1| upload_account_name:jianfeng-ren Solanum lycopersicum chromosome 3 clone C03HBa0013a17, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces">
        <position start="22634" stop="9508"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22334" g_stop="22113" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="222" r_length="222" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="22112" i_stop="19780" i_length="2333">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19779" g_stop="19658" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="223" r_stop="344" r_length="122" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19657" i_stop="19580" i_length="78">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19579" g_stop="19496" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="345" r_stop="428" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19495" i_stop="13504" i_length="5992">
            <donor d_prob="0.912" d_score="1.00"/>
            <acceptor a_prob="0.950" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="13503" g_stop="13407" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="429" r_stop="525" r_length="97" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="13406" i_stop="9829" i_length="3578">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="9828" g_stop="9808" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="526" r_stop="546" r_length="21" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C03HBa0013A17.1" gen_strand="-" ref_id="SGN-E319001" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>546</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C03HBa0013A17.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E319001" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22334" e_stop="22113"/>
          <exon e_start="19779" e_stop="19658"/>
          <exon e_start="19579" e_stop="19496"/>
          <exon e_start="13503" e_stop="13407"/>
          <exon e_start="9828" e_stop="9808"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTACTTCACTTCAAAATTTGGTACCACCATTTTCTTGCCGGCGTACGACCTATACATCTCCTTGTACACCTATCGCCATTTTCCGAGGAGGGAGAAGAAGAAATGCAAGAAAGATGTTGAGGGTCTGTAGAGCTATGGTTGAGAAGACAGTACAAGGGGCTTCTTCTACTTTTGCTAAGGAAATGGAAAGGCTTTCAGCTAAAGAGTCTCTGCTTCTTGCAGTTAGTGCTTATCCCTTTTTACTCCAATTTATTTGTTTTTTCCTATTTAAGTTTAAGTAACTCATTAAAATTGTGGAAAATTTGAGGGGAGTGTTAAGAGTGTCTCGCATTAGTTATGTGAATGATTTGTTGTCTTCTAATATGTTTTTGGGAAAGGCATTTCTCACCTCGCCAGCTAAATTTTTGTGTTGAAGGTCTATATTATTAACAATAGTTATGTTTATGTTTGTGTTGCTTGTTTTAATTTAAGAGTAGTTTGTAAATCCAACTTGTACTAGGTAATCATAGGTATCTATTGGGATACTCATGGACATTCTCTCTGCCACTTGTAGATTATTGTCATGTCTACTTCTTATTTAATGGCCCATTCTATTTAATAGACTTAAATGATAGAATTCACAGCAGTACATAAACAAAAGGCAATATGACCCTTAACTTGGCGATAGCGGACAATTATGAACGTCTATTATGGATGTGTACAAGTAAGCACTTAAACTTGTATAAAATTGAATAAATAGACACAATCGTCCTACATGACAATTTTGTGTCCTGTATGGCGTCCTATGTGTATTGTCCGCTGGAGCCAAGTTTAGGGTCAACTCTATGTATTATGCCTAAACAAAATAACTAAAAGAAAAATCAAGAACGGTGGTGTAGACTGACAGCAGAGATCTATTCTCTTTGTTTCATTTTACTTGACACTTTCTTTTTTAGTATGTTAAAAAGAATGACATCTTTCTATTTTTATGGAGAATTGTCATTCATGACAAGTATGGTCAAGATGACCAGTGATGTCCAAAGGTGGTTGTGAGCCCCCATGGTGTAGGAGTTTGGAAAGCAATCAGATCCCTTTGGTCTTTGATGGCTGGAAAAATTAGTTTAAGAGTGGGCAATGGAAGGAAAATTGTTCTTTTGGGGTGATAATTGACTGGGGCATGGACCTCTAAGGGAAGTCTTCCCTGAATTCTTTAGCATTGCCACTATGCCGAACATTAATTTGGAATCAGCAAAAAGAGTACAGGGATGGAATTTACTGTTAGAAGGCTACTGCATGATTGGGAGCTGGAAAGAGTTGTTGAATTTTTCCAGACCTTGAAATCATTCTAAGGGTTCAAAGATATTGAAGACTCACTTATATGGAAGCCTACCGGTATATGACCTAATTCTGTTAACTTAGCTTATAGCATTCTGATTAGGCACAGACAGTCAACTAATTAGAGTCCATGGAGATCCATTTGGAAGATGAAGGCTCCTTTTTAGGTGGTATGCTTTTCTTGGTTAGTAGCAACAAATGCTTGCCTCACACAGGATAAAGTATAAACTTCAAAAAAGGGGATTCCAACTGTGTTCTAGATGCTTTTTGTGCGGAGCTGCTAGGGAAAATAATAGTAACCTATTCATTCATTGTCCTGTTACTGGACAATTAAGACAACTATTCTTGAACATGTTAGGAATCAGATGATCAGTGCCAACAAGTGTTAATCTACTGAGATGTTGGAACCAGAATGATGGGGCAGTTAGTCAGAAAAATTGGTGGAAACTTGTCCCTGCTTGCGTATGGTTAGATCATTTAGAAGGAGCGGAACTATAGAGCTTTTGAAAGAAAAATACAATTTTGTGGCGATAATCAAGATGAACTGTATACTTTTGTTTTGTTTTTGGTGTAAAGAAATCTATGCTAAGGAGGCTGAATTACTAGTTGATATGATAGAATCCTTGTGAAGCAGTAGCCTAAGCTAAGCTTGGTTGGGATCTTGTTGTGTCTTTTGCACTGTCATCGTGCAACTTATATATATATATATATATATATATAGTTGTTGCCAGTTTCAAAGAACACACACATTTAACTTTAAACTTCTCATTTACCCTAAATAACATGATTTTGTAGGTACATAAATGTCATGACATGCTTAAGGCCACATGTTTGATAACTCTTTTTTCTTTTATAAATTTCATGTACAGTTTCACATAAAATAAGGTGGGTATTATATGTACTCTTGTCTCTTTACTTTTTTTCCTGCAATTCATAATTTTCCTTTGTTTAAATTCTTTCATTGTTTCTCTATGATTGACTCATCAAAGAATTGGCCTTGGGTAAAGTGAACGTTCTAATATATCCCATTTCCATTTGAGAAAAGGCTCAGGGAATGGTGGAAAGAGTGTCACAGGAGATACAAAGTTGTCAGGTCTGCAGGAGGGTTAACTTGGTGGAACCGAGAGGTTTAGAGAACAATATTATTGATAATATTGCAATGGTTATTTTCATGAAATTGCACTTCTGTTCTTTCTTTCTGTCCCTTAAGCACTAAAAGAAATTAATTACACTGTTATAGTTCAAAGATGCTGGTGGATTTGAAGCATTGGTCACTGGGAAGACAACAGATGTACAATGCATTGATGTGAATGAGAGGATTATTAGTCTCGAGAAGCTCAATCCGACGCCTCGTCCCTCAACGTAAGGTGTTAAATCTTACCAATAAACTTAATTTTCAAGATTCTTGACAAGGTACTCATTGGTGGTTTCATTTCCCAGGTCTCCCAATTTGGAAGGACGATGGAATTTTGAGTGGTTTGGAGCTGGTAGCCCAGTTCTTCTTCTTGCCAAAATATTTTTTGGGTAACTTCTATTTTTTGGGATAACATTCACTTCTATTTTTCCTATTCCAACTTAAACTCATTAGTGTATGAACTACGTATACGAAATGAAGTACTTGTGCAAATAATGAATCAATTCTACATGAAGTAGTTTATTCTTTTTCTGCAACCTGCATTGTGCTACTAATAAATAATTGTCATACTAGAGATCAAATGGAGACCATGTCTTCAAGGCTAACAATTTAGAGAAGAAAGTTTGAACCATGGGTATGATGGTTGCCTTCCACTATCTAAAGTGCATGCTAAATGTTTAAGCATCTAATCATTCCCTTCCATACCTTTGCACCAGTGGCAAATTAAGTGATAGTTGAGTGGGGAAATTGCACCTACTTAAATTTGATAAAATTACGCTATATACCAAAGCTTTTGCTTAGAATTTCAAATCATTCCATTTTGAACCTGATAATTTCCTAGAAAAAGTGAGAAATTGGTAGAATATTTTTATCTGAGGCTGAAATTTGATAAAATTACGCTATATGCCAGAACTTTTGCTTAGAACTTTGACTCTTTTCCATCTTTGAACCTGATAATTTCCTAGAAGAAGTCATATTGGTAGGATAGTTTTATCTGAGGTGTCTTGCATAAGGGAAAAAGTAAAATGCTAAAAGAAATGCTTTTAGCTTCTTTCATCCAACTAAAGGGCCTTCCGTTTATCTTTTCATTTTCTCTCTTTCATTTCTGATGACACAATATTTGAATTACTTTATTTTCTTACGTGCACTTGCTTTTAAGCTTAGAAGTCACAGCTAGCCCACAAAGTTGCTTGTCAGGGCCACTTTATAAAATCAACAAAATTGCTTGTCAGCTATCTTCTGGCTATATAAAATAAAAATAAAATTTATGATTTGTTTTGTGTGAATGTACTATGTATAGTTAGAAAGTTAGCCAAGATGGGTTGATATATTCATATTACTTGTATTAGTGGGAAGGTGTGTACCCAGTGAAACAGTTGAGATACGTGCAAGCTTGTTCAGATACTATGGTTATTCTCCCAAAGAATAAGAAACCCCACAAAGTGATGAGATGAATCACTCTTTTAGTCCACCAAACTAGATAAAGGTAAAGAAATAATCTTTGCTCTCACTGGGAAAAAATTCTGATTGGGAAGAAAAGGTATGGGAATAAGAAAAGAGGTCCAACCTTTTTAAGGAATGCAACCGATTTTATGACATTGAATTTTGAAATTTGGCGAAAGACCAAACTAAACCTCCATTCATGGAGGCCAATTGTTTCCCTTCAGTTAGGTCTTTACTATTTAAGTACATTATTGTCTACTAGGTATTTGCATGATTTTTCTTTTGAAGGAAAGACAACATTTACCATAATTGGTTGAAATTTCCTTCCCAAAAATTGAAAGTAAAGATCTTTCATATTTAGTTAATCTTTTTCACGGAGAAAATAATTTTGGACCTCTATAGATTGTGGTTATTTCCTTCTCACTTGGTAGCATCCACAATGCAACTATTAAAGGGGGGGGGGGGGGGTTACAGAGTTTTGGGGAGAATTTGTGAAATACAAGTTTCTATTTTGAAACTAGTAATGTTGTATTCCTCAACATTAAGGACATGTTGGAAACCTTCGAAAAAGAGAAAACAGTAATTAAAAGTATTCCCTACAAAAGTCCTAACAAATCTACAAGCTGCTTTGATCCTCTATACCTTTCCATTTGACTTTCTGAATGAAATTGTACCTATCTCCAGAGTATATACTATCCCTCTCACTCCAAGTAGTCCACTTGATGCAATGTAGAATTATCCTCCACCATTTCTTCTGGCTCTTGTTACCTCCTCTTCTGATCCAACAACTCAAAAATCTACAACATGCGTAGGAATGGTCCACTTTGTCTTTGTGAGACTGAAGAAGATTGTCCATCGTCCATCTCTTTTGTATATGTGCAGTGCAAAATAGGTCTCTGTCTGCTTCTGCATAGTATGTATCTGGATACAATATTTAACCCCCTTCTCTTCAAAACTTCATGTTGTCAAGCAATATCTCCTAGCTACCAACCATGTAAAGCATTTTACCTTCGTTGATGCTAGGTTTTTCCAAATATTCCTCCATACTTTTTGACGGTCTCTAACTTGCTGAACATTTCTTTTTTATAAGCCCTGTTTACTGTTAATACCCCCTCCTAACTGTGTTCCACCTCAAAAATGTCAGAGTCAGAAGTGGTACCTTTGAAATCCTCTATCCCTTTTAGAAAATTGGCACTCTATCCACCTTCCAGTCATTCAATAACTTGCTAAAGGATAAGTTCCATCCTTGTGGAGTCCAACATTTATTCATAGGAGCCTCAAGCGTTGTTCTGGAGAGCAAGAAGCGGAAAAAAGCGAAGAGCGCTTGCTTCACTGAAGCTGAAGCAAAGCACACATTTTTTTCTACTAAAGTGTTGTTCAGAACAAAAACAAAAAATAGTAATATGCATATATAAATAACCAAGAACTCAATAGATATAACATATTAAGCAAATCTTTCAGTTCTTAAATTAGAAAGCTTATAAAAGATGGTCAATAATCCTCATAATCATAACATATTAAGCAACTCGTAATCATAACATATTAAGCAAATGCAACATCAAAACCAAATAAGTAAATAGACAGAGCATAACAGGGGAAAGAAAACCCTAGAAGTAGTTCCTGAAAGCCTGAAAGAGAGTCCAGAGAAGACGAAGAAAAGAGATTAAGAGAGGAAGAACTTATCTTTTTGAGTCGCAGCAACAGATGTTGAAATGTTTGAGTCACAGAAGAAGAAGAAGAAGAGCGAAATGTTTAAGTCACAGCAGGCAAGTGTGTTATACAGAAGGAAAAAAAACCTAACAGCACTTAAGCACGCTTTTTGTCATCTTTGCTTTAAGCGCGCTTCAAGCTTCGCCTACTGAAGCACTCATTTTTTTAGCAGCGCCTCGCTTCAGACCATATAAGCGCAGTGCTTGCACCTCGCCTCGTTTCGCGCTTTAAGCGCGCTTTTTGTCGCTTTTCACAACACCCTAAGGATTATTTAAGGAGAAGTTCTATCTTTGTGGAGTCCAACATTAATTCATAGTAGCCTCGGGATTATTGCACAAGACAAACAGATCAGGAAAGTATTCCTTTAGAGGAGTCTGTTCATTCCAAGCATCCCTCCAAAATTTATTGTTCTATCATCTCCCACTTTAACTAACATGTTCACTTCTAACTTGGGCCACAAAGCTCTGATAGTTCTCCATACCCCAACACTTCTTATCGCTGCACCAAGGGCTGGACTCACCAAATTTGCATTTAACAACATCCTTCCATAAGGCTTGCCCTTGTCTTTTGTATCTCCATAGCCACTTCAACAGTTCCTGATGCCCAAAGCCCCCAAATCTTTGCTAAGTTTAACCAAACTAGTATTGGGAACGTACGATGCACGTTTGTCCCCTACAACTGCAAAAAATTTGGACATCGAGTGAAAGATTTATGGTGCTTTCAAAATAGAAACAATTCAATCACAATAAGTTAACTAAGATACATAGAGCCTTACAGCACGCCTCACGGGAAACCAAAGCTTGAAAACAATTTCAGGAATTAAATATGGAGAAACAAAAACTGACCTGAAAAATGCCTCTCCTACTTTCTAGGTGAGAGAGTACCCTCTGTTCGGTAGGTCACCACCAACCTCATCCTTCTCCTCAGCTATCTCCGTCTGTGATAGCTTTCTCCTTCCCTTACAGCAGTTCCCTTCCACAGACATGGAGGAAAATAGGATTTATTTCCACACCGGTTTCAAGTCATTCAATAATATCAGATGGATATCTGGGGAGGAAGCCTAGTTTGATTGGGTGGAGCTTAGTATAAACTTGATGAGAAGAATAAATCTCAGCAAAAAAATGATGGAGTGGATTTGTTTTCTCCTGGAAGAAGCCTCAAACGACAATAAGAATCTTATGAGGAGATTGAGAATGAACTATGAAGGACCAAATGGCAGAGTATTTTAGTACAAGGAAGTTTAATGCCCGCGGAAGACTACTCTTGGAGGATTGAGGCCATGAGCGTATAATTGGATTTATAAAAGTTGATTGGGTAGGATCACCCTTTTATAGATTTTCTATATCCGGATATTGTGTTTAGGAGGTCATTTGGTGGCTTAGAAGAGTAAGTAACAAAGTGTGGTTGATCTAGTGCAAAAGCAGAATACTGAGCAATAGTCATAGCAAGTTGTGAGCTAATTTAGATTAAACAGTTGCTGAGAGAACAATGATAATTGAATGAAAGAAAAACCACTGGTAGGGATATGAATGGAGTCTCGCTCAGTTAAGAGAGTTGTAGGATTCGTAAAATAGGAAAAGAGCATCTCAAAGTATGGGGCAAATGGAACTTGTGTGTGATAGCCAAATGTCCCTTCATATCACATCAAATCTGGTATTTCATCGGAGGACGAAGCACATTGAGATTGACTCTCACTTTGTCAAAGAAAGATAATCTCGGAAGATACTGTTACAAAATTTGTAAAGTTGAGTGATTAGCTTGCAAATGTCTTCACCAAGTCCCTCACCGGTCCTCGTATTAGTTACTGTTGGATATGTAGCAAGAATTGATGGGAAATAGAGGAAAGAAGAGGAATTTGAAGAGGAAAGAAGAGGAATTTGAAAAGTTTAGAACTTGAAAGGTTGGGAACTTGAAAAGTCCTCTAATGCTTTAATGAAAAAGGCAATAGTCCCTCATCGGTAATGGAAATGAAAATAGGAGAGTTTAAATAAATAAACACTCCTATTAATTGTTAAAAGGGTTGTAAAAAGGGACCCCCCTCGCGCCGTCGTCGTCGCTCGCTTCGGCGTCGGCTACGGCTTTGGCAAATGATCGAGAGATAATTTTTTGGACAAATTTATTTTAATTATTTATTTAATTAATTTAATGGCCAAAAATTATTTTCAATTAATTAGTTGATAACAGAAGTTAACCGAAATGTTTTCAACTTTTTAGTTAACCCGACCCAACTCGGATCGCGCACGTGACCCGTTTTAAATTCCGTTATATTTAAAAATTTCCGTCATGACTGTTCTGAAAGGTTGCAACTTTCAGGAACAATCAATACCATTTGAAAGTTTGCAACCTTTCATTAATGGTCGTGTCAATTCTGAAAGGGTTGCAACCTTTCAGAATATATTCTTCTTGCCTATAAATACCATTCAGTCTTCAGAATATTTTCCTCCGAATTTTCTAGATCTTCCTTCTTCTTAAAAACACATATTTCTTCGTGTACTTTCCTGCTGTGGATTGATTCGCTGACAGTAGAGTTTTTGGTATCTATACTCTACTGATTAAGATCATTTTACCTTGGGAGGTTATATTCCAAATCAAACCTCGGATACTAGAGGGGAATAATTTCCTTAAGGGGACACTGTGAATTCAGTGGACTTGATTTTCTTCCTATATTATTAAAAAAAGTATTCCAGATTCTGGTAAGTTTTAAAGATTCAATTTTTTTTTTTACCAATAAATTTCTGTTCACCTTTTTTACTGGTTCTAAAAATCTCAGTTACTTAGTGTTTCTGACTGATTTATTACAATCAGTAATTTCTGATTTTCATAACACAGATTGGCAACAGTTACATCTGTAAGAAGGTCGGTACATGTAACAAGGTCCGTACATATGACTTGTATGCACTAACTTGAGGGGGAGTGTCAAAATTGGAATATGAACAAGAATATAAATAGTATATGGAACTCTAATTGGATAAGGATTGCAATGTAGTGTCTATAAATAGGACATAGTGCAATAATGTAGAGACATAATTCAATAGTATATTTCTATTATATTTCTCATAGACACCTTTACTTGAGAGGCCTGAGCATGCATGCTTGTTCACTTTTAGTCAATATGCTAATTTCAGTTGATATCTTCTTAACATTGAGGTGAATGATCGTAGTTTTGCTTTGAGTTTAGTTTGATGAATGTCAGCTTATAATATTTCTACCGGGAACATGCTTTTACAGGAGAATTCCTCCAACATTGGCAAATTTATCAAAATTGGATGTGTTGATCAAGGATGGATGTGGGACTGCTACCGCACAAGTCAAAATACTAAATTCGGTAATTTATCTTTGTCAGGAAATTTGATATGTACATCCCATGCTCTAATATTCAGAAAATGATCTTCCTCTTCTAGTTATAGAATTGGAAATAAAACAATACTATTGTTTATGTTTTCTACAAACAAACGTCTTTGGGTTCGCAAACTAGTCATGCAGGGCAGTAACATAGGGATCGTTATGCGGTGAGTCATAGTGTAGTGATTTACTCACAGTGAGTAATAATCTATGGACTGTTCTACAATGAATAATATACAAGGATTGTCTACTTCAACAGCAGTTTTATGATCCCTAGATACTTTTTATCCAGGTATTGGTAATACAGTATTGTCATTCTACGATCTCTCCTCCATGAGATTATGTATAGTTTTCTGCATAAATTTGCCGCATTTGTATTTTTTTTTGATAACCAAATTTTTCGTTTTTGTATTTAAAAGTGCAACCTGAATTCTGCCTTAGTTATGTAGAGTTTGTACTTTGTACCGGAAACTACACATTATATTAGTTATTATGCAGAGATTATATTAATAACAGAGTTATGTGTTGCAAATCACTGTAATATTAGTTACGAGAAATTGAGATTATTACTCTTAGTTGGTCAATCAAATGCCCATGATGTGATATAACTGGTCAGCACCATATATCTTGCTTTCTTCCTCCTTTAATGCCTCACATCTGCTTGATAATTCGTACGCCAAGAGACACATTGATGGCAAGTGATGTTTTGGTCATGTTACCTAGAAAAATAGGTAGGACGAGATAACAAGCGCTAGATGTATAGCTCTATACTTTGACATTATTACAATACCAACTTATTGAAACATACGAAAACAGCTTAATAACAGAAACTTAGTAATTGAGGCCATTAACTTGCTGACAAGGTGGTAACAGTTTTACATTTACGTGTCACTTTTTAAAATCCTTATTTTGTATGACTATGTCTGTTTGGTATCTTGAATATCCTTTTGCAGCAGAAAGTAAAGCTAAGCGGAATAAAGCTGGAAGTGAATGATATAGGAAAATCTTAGCTTTACTGACTAGGGGATTAGGTACACAAACAAGATACATGCTTATTCTATCTCCAAATTTCCAGAAGTCTCTGTTCTTCAGTGTTTAGTTCACCTGTTCTCAGACTTTATTTAAGTTAAGAATTTTATGAATTTTGTGTAGCTAAAGATTTCCACAGCTAATGAGGTATCAAGAAGCTGCAATAGCAGTATTGCAATTCAAAACACAACAACAACAACAACATACCTAGTGAAATCCCACAAATTGAGGTTGTAGAGGGTAAAGTGTATGTAGACCTTATCCATACCTCGTGGCGGTAGAGATACTATTCCCGGGAGACCCTCGATTCAAGTGAAGCAGAATAAAGTAGTAATGAAAAGGAGAAACAACATTGAAGAAAACATGTCAACTAATAGGAAAGGAGTGCAGAGCATAAACATTAACAAAATAGTGCAATCACCTAAACATAATAAACAACAGATTGTAACAGATAACAAAAGCAAGAAACTACATGTATAAGAGTATTTATTGTGACAAACATGGTGCGCCAGAGTCCAGACTACTACCAAACCTAATCTCGTCAAAAATCAAGAAAACCCTCGACTACCTACTAACCTTCTACCCTAATCCATGACCTCCATACCTGCCTATCTAAGGTCGTGTCTTTAGTAAGCTAAAGTTGTAGCATGTCCTGTATAATCGCAATCTACCTAATACTTCTTCAGCCTACCTCTACCTCTCCTCATATCCACTATATCCAACCTCTCGCACCTTCCTTCACTAGGGCATCGACACATCTCTTCTTCAAATGTCCAAACCATCTTGGTCTTCCTTCCTCATCTTGTCCACCACAGAGGTCACTCTCACCTCTTCCCAGATACCCTCATTCTTAATCTTATCACTCCTAGTATGCCCACACTTAAATGTTATTTTAGTTACAAGCTCAAATTCTAGACTTGCATACAGTTCCCAAAAGAAAAGAAAAGAAATTCAACATCAATAGTACCGGATATTATCATATCATATTATATTATAAGTGGAAGCTCCAAGATGTAAAGTTGAATTACCATTTTATCCCTATACTAAATAAAAATGTTATATTCATATTTGATTATTTTGTTTTTGAAAAATATTGAGCAGTAAACGTTTTTTACTATTAATGAATTGAGAATATTTGAACAGTTATGAAAATTAAATAATCTAAACGTTAAAGAAAATGAAGAGACAAATGTTAGTTAATGAGAGCAAATAGGTAGAGATTTAAGTTGCACATTAACTAAAATATAGAAGCAGTTACCTTTACATTGCTAGAATCTTAAAAGTTGTAAATTTCAATACAATGAATCTCATAGTTAATTTATTAATATATGTTATTTTCAATGATAAATACATGAAAAGAAGCTAAAGAGACTAATTAATCATTTAAAGTGAAAGTATTATATAAAGCCAAGAATAGTTTTCATTTTCCTCAAGTTCCCTCTCCATTTTTATGGGCTCTAAAGAAGAGTATATCATTTCTCTGAGCAGTATTTTCTCAATCAATGTCAAAGTTAAAGGCTATTAAAATACGCTATGAGAGTTGTTGGATTTGTGCAAGAATTTCAGCTATGAATGTTGTTGGATTCATCAAAGAAATTTCTTAGTGAAGAATGCACTTATGACACTTATTATTTAATTTCCTTGTTAGGGCTTAATATATGCAACACACAACATTAATTTTACGGTAAAAGATTTCTATATGTTACTGATTTTACACATTTCATTAACGTAGCACATAAAATTTCACTTATTCAATTAAATATTGTAGTTGTATAGTTTTTTGGATTTTGGATCTTAGAAACAAAAACACCAGGATGCTTATCAATTTTAAGAACATGTAATTTGTATTTTCTATTTTATAACACATAATATAACTAAAAAATATTGCTAATCTACAATCTTCACAAAAATATTTTTTATGTATATGGCCACATGCACGTGGCGCGTACCCAGAAACTAGTTAACATAAGGAGGAGAAGATGAACAAAGTGTTAGGTCTTGATAAGCTATAAATAAAAAGCTTATGATGGTGTTAACAATGCTAGCTTGATCCACCTCGACTATTTCACCAGGAACCTACTACCTCCAACCAGCAGGTATCTGGTACTTCCTGCTCACCAAGGTTTAGACAAATAGAAAGAAAGCACCTCACTATTAAAAACTCAAAATGAGAAGTGTTTAAATAAGTTAGGGTCAACATTACTTAATATTCTTATTTTGATGAGGCAAAAGTGAATTGGGGCCTGTTCATGTGTTGATTCTTGATTTGCACTCAGTTTGAAACTTAAGAGGCTCATGCTCAGTTGCCTCATTATCACTTAGGCCTTGACCCCTGCTTCTTCAGGCTGGTAATTAGCTCTAGGCTGGTCAATATCAGTTGAGTTGTATTCTTCATATTGAGTCTTACACAAGGACTCAAGGTGTTGCATCTTTCAATTTATCGGTTGAGGTTTTTGTGAAATGTTAATGATATTATTAGTATATCTGATCATATGTATCTGAAGAGGTGAAATACTTTTTTGTGAAATGCAGATTGAGAATAAATTTATCATC</genome_strand>
        <mrna_strand>GCTACTTCACTTCAAAATTTGGTACCACCATTTTCTTGCCGGCGTACGACCTATACATCTCCTTGTACACCTATCGCCATTTTCCGAGGAGGGAGAAGAAGAAATGCAAGAAAGATGTTGAGGGTCTGTAGAGCTATGGTTGAGAAGACAGTACAAGGGGCTTCTTCTACTTTTGCTAAGGAAATGGAAAGGCTTTCAGCTAAAGAGTCTCTGCTTCTTGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAAAGATGCTGGTGGATTTGAAGCATTGGTCACTGGGAAGACAACAGATGTACAATGCATTGATGTGAATGAGAGGATTATTACTCTCGAGAAGCTCAATCCGACGCCTCGTCCCTCAAC..............................................................................GTCTCCCAATTTGGAAGGACGATGGAATTTTGAGTGGTTTGGAGCTGGTAGCCCAGTTCTTCTTCTTGCCAAAATATTTTTTGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................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.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGAGAATAAATTTATCATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E337114" ref_strand="+" ref_description="SGN-E337114 [cTOE-7-O8]">
      <seq>ccttgtacacctatcgccattttccgaggagggagaagaagaaatgcaagaaagatgttgagggtctgtagagctatggttgagaagacagtacaaggggcttcttctacttttgctaaggaaatggaaaggctttcagctaaagagtctctgcttcttgcattcaaagatgctggtggatttgaagcattggtcactgggaagacaacagatgtacaatgcattgatgtgaatgagaggattattagtctcgagaagctcaatccgacgcctcgtccctcaacgtctcccaatttggaaggacgatggaattttgagtggtttggagctggtagcccagttcttcttcttgccaaaatattttttgggagaattcctccaacattggcaaatttatcaaaattggatgtgttgatcaaggatggatgtgggactgctaccgcacaagtcaaaatactaaattcgattgagaataaatttatca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C03HBa0013A17.1" temp_strand="-" temp_description="C03HBa0013A17.1  AC238559.1 htgs_phase:2 submitted_to_sgn_as:gi|261249975|gb|AC238559.1| upload_account_name:jianfeng-ren Solanum lycopersicum chromosome 3 clone C03HBa0013a17, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces">
        <position start="22574" stop="9510"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22274" g_stop="22113" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="162" r_length="162" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="22112" i_stop="19780" i_length="2333">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19779" g_stop="19658" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="163" r_stop="284" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19657" i_stop="19580" i_length="78">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19579" g_stop="19496" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="285" r_stop="368" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19495" i_stop="13504" i_length="5992">
            <donor d_prob="0.912" d_score="1.00"/>
            <acceptor a_prob="0.950" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="13503" g_stop="13407" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="369" r_stop="465" r_length="97" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="13406" i_stop="9829" i_length="3578">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="9828" g_stop="9810" g_length="19"/>
          <reference_exon_boundary r_type="cDNA" r_start="466" r_stop="484" r_length="19" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C03HBa0013A17.1" gen_strand="-" ref_id="SGN-E337114" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>484</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C03HBa0013A17.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E337114" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22274" e_stop="22113"/>
          <exon e_start="19779" e_stop="19658"/>
          <exon e_start="19579" e_stop="19496"/>
          <exon e_start="13503" e_stop="13407"/>
          <exon e_start="9828" e_stop="9810"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTTGTACACCTATCGCCATTTTCCGAGGAGGGAGAAGAAGAAATGCAAGAAAGATGTTGAGGGTCTGTAGAGCTATGGTTGAGAAGACAGTACAAGGGGCTTCTTCTACTTTTGCTAAGGAAATGGAAAGGCTTTCAGCTAAAGAGTCTCTGCTTCTTGCAGTTAGTGCTTATCCCTTTTTACTCCAATTTATTTGTTTTTTCCTATTTAAGTTTAAGTAACTCATTAAAATTGTGGAAAATTTGAGGGGAGTGTTAAGAGTGTCTCGCATTAGTTATGTGAATGATTTGTTGTCTTCTAATATGTTTTTGGGAAAGGCATTTCTCACCTCGCCAGCTAAATTTTTGTGTTGAAGGTCTATATTATTAACAATAGTTATGTTTATGTTTGTGTTGCTTGTTTTAATTTAAGAGTAGTTTGTAAATCCAACTTGTACTAGGTAATCATAGGTATCTATTGGGATACTCATGGACATTCTCTCTGCCACTTGTAGATTATTGTCATGTCTACTTCTTATTTAATGGCCCATTCTATTTAATAGACTTAAATGATAGAATTCACAGCAGTACATAAACAAAAGGCAATATGACCCTTAACTTGGCGATAGCGGACAATTATGAACGTCTATTATGGATGTGTACAAGTAAGCACTTAAACTTGTATAAAATTGAATAAATAGACACAATCGTCCTACATGACAATTTTGTGTCCTGTATGGCGTCCTATGTGTATTGTCCGCTGGAGCCAAGTTTAGGGTCAACTCTATGTATTATGCCTAAACAAAATAACTAAAAGAAAAATCAAGAACGGTGGTGTAGACTGACAGCAGAGATCTATTCTCTTTGTTTCATTTTACTTGACACTTTCTTTTTTAGTATGTTAAAAAGAATGACATCTTTCTATTTTTATGGAGAATTGTCATTCATGACAAGTATGGTCAAGATGACCAGTGATGTCCAAAGGTGGTTGTGAGCCCCCATGGTGTAGGAGTTTGGAAAGCAATCAGATCCCTTTGGTCTTTGATGGCTGGAAAAATTAGTTTAAGAGTGGGCAATGGAAGGAAAATTGTTCTTTTGGGGTGATAATTGACTGGGGCATGGACCTCTAAGGGAAGTCTTCCCTGAATTCTTTAGCATTGCCACTATGCCGAACATTAATTTGGAATCAGCAAAAAGAGTACAGGGATGGAATTTACTGTTAGAAGGCTACTGCATGATTGGGAGCTGGAAAGAGTTGTTGAATTTTTCCAGACCTTGAAATCATTCTAAGGGTTCAAAGATATTGAAGACTCACTTATATGGAAGCCTACCGGTATATGACCTAATTCTGTTAACTTAGCTTATAGCATTCTGATTAGGCACAGACAGTCAACTAATTAGAGTCCATGGAGATCCATTTGGAAGATGAAGGCTCCTTTTTAGGTGGTATGCTTTTCTTGGTTAGTAGCAACAAATGCTTGCCTCACACAGGATAAAGTATAAACTTCAAAAAAGGGGATTCCAACTGTGTTCTAGATGCTTTTTGTGCGGAGCTGCTAGGGAAAATAATAGTAACCTATTCATTCATTGTCCTGTTACTGGACAATTAAGACAACTATTCTTGAACATGTTAGGAATCAGATGATCAGTGCCAACAAGTGTTAATCTACTGAGATGTTGGAACCAGAATGATGGGGCAGTTAGTCAGAAAAATTGGTGGAAACTTGTCCCTGCTTGCGTATGGTTAGATCATTTAGAAGGAGCGGAACTATAGAGCTTTTGAAAGAAAAATACAATTTTGTGGCGATAATCAAGATGAACTGTATACTTTTGTTTTGTTTTTGGTGTAAAGAAATCTATGCTAAGGAGGCTGAATTACTAGTTGATATGATAGAATCCTTGTGAAGCAGTAGCCTAAGCTAAGCTTGGTTGGGATCTTGTTGTGTCTTTTGCACTGTCATCGTGCAACTTATATATATATATATATATATATATAGTTGTTGCCAGTTTCAAAGAACACACACATTTAACTTTAAACTTCTCATTTACCCTAAATAACATGATTTTGTAGGTACATAAATGTCATGACATGCTTAAGGCCACATGTTTGATAACTCTTTTTTCTTTTATAAATTTCATGTACAGTTTCACATAAAATAAGGTGGGTATTATATGTACTCTTGTCTCTTTACTTTTTTTCCTGCAATTCATAATTTTCCTTTGTTTAAATTCTTTCATTGTTTCTCTATGATTGACTCATCAAAGAATTGGCCTTGGGTAAAGTGAACGTTCTAATATATCCCATTTCCATTTGAGAAAAGGCTCAGGGAATGGTGGAAAGAGTGTCACAGGAGATACAAAGTTGTCAGGTCTGCAGGAGGGTTAACTTGGTGGAACCGAGAGGTTTAGAGAACAATATTATTGATAATATTGCAATGGTTATTTTCATGAAATTGCACTTCTGTTCTTTCTTTCTGTCCCTTAAGCACTAAAAGAAATTAATTACACTGTTATAGTTCAAAGATGCTGGTGGATTTGAAGCATTGGTCACTGGGAAGACAACAGATGTACAATGCATTGATGTGAATGAGAGGATTATTAGTCTCGAGAAGCTCAATCCGACGCCTCGTCCCTCAACGTAAGGTGTTAAATCTTACCAATAAACTTAATTTTCAAGATTCTTGACAAGGTACTCATTGGTGGTTTCATTTCCCAGGTCTCCCAATTTGGAAGGACGATGGAATTTTGAGTGGTTTGGAGCTGGTAGCCCAGTTCTTCTTCTTGCCAAAATATTTTTTGGGTAACTTCTATTTTTTGGGATAACATTCACTTCTATTTTTCCTATTCCAACTTAAACTCATTAGTGTATGAACTACGTATACGAAATGAAGTACTTGTGCAAATAATGAATCAATTCTACATGAAGTAGTTTATTCTTTTTCTGCAACCTGCATTGTGCTACTAATAAATAATTGTCATACTAGAGATCAAATGGAGACCATGTCTTCAAGGCTAACAATTTAGAGAAGAAAGTTTGAACCATGGGTATGATGGTTGCCTTCCACTATCTAAAGTGCATGCTAAATGTTTAAGCATCTAATCATTCCCTTCCATACCTTTGCACCAGTGGCAAATTAAGTGATAGTTGAGTGGGGAAATTGCACCTACTTAAATTTGATAAAATTACGCTATATACCAAAGCTTTTGCTTAGAATTTCAAATCATTCCATTTTGAACCTGATAATTTCCTAGAAAAAGTGAGAAATTGGTAGAATATTTTTATCTGAGGCTGAAATTTGATAAAATTACGCTATATGCCAGAACTTTTGCTTAGAACTTTGACTCTTTTCCATCTTTGAACCTGATAATTTCCTAGAAGAAGTCATATTGGTAGGATAGTTTTATCTGAGGTGTCTTGCATAAGGGAAAAAGTAAAATGCTAAAAGAAATGCTTTTAGCTTCTTTCATCCAACTAAAGGGCCTTCCGTTTATCTTTTCATTTTCTCTCTTTCATTTCTGATGACACAATATTTGAATTACTTTATTTTCTTACGTGCACTTGCTTTTAAGCTTAGAAGTCACAGCTAGCCCACAAAGTTGCTTGTCAGGGCCACTTTATAAAATCAACAAAATTGCTTGTCAGCTATCTTCTGGCTATATAAAATAAAAATAAAATTTATGATTTGTTTTGTGTGAATGTACTATGTATAGTTAGAAAGTTAGCCAAGATGGGTTGATATATTCATATTACTTGTATTAGTGGGAAGGTGTGTACCCAGTGAAACAGTTGAGATACGTGCAAGCTTGTTCAGATACTATGGTTATTCTCCCAAAGAATAAGAAACCCCACAAAGTGATGAGATGAATCACTCTTTTAGTCCACCAAACTAGATAAAGGTAAAGAAATAATCTTTGCTCTCACTGGGAAAAAATTCTGATTGGGAAGAAAAGGTATGGGAATAAGAAAAGAGGTCCAACCTTTTTAAGGAATGCAACCGATTTTATGACATTGAATTTTGAAATTTGGCGAAAGACCAAACTAAACCTCCATTCATGGAGGCCAATTGTTTCCCTTCAGTTAGGTCTTTACTATTTAAGTACATTATTGTCTACTAGGTATTTGCATGATTTTTCTTTTGAAGGAAAGACAACATTTACCATAATTGGTTGAAATTTCCTTCCCAAAAATTGAAAGTAAAGATCTTTCATATTTAGTTAATCTTTTTCACGGAGAAAATAATTTTGGACCTCTATAGATTGTGGTTATTTCCTTCTCACTTGGTAGCATCCACAATGCAACTATTAAAGGGGGGGGGGGGGGGTTACAGAGTTTTGGGGAGAATTTGTGAAATACAAGTTTCTATTTTGAAACTAGTAATGTTGTATTCCTCAACATTAAGGACATGTTGGAAACCTTCGAAAAAGAGAAAACAGTAATTAAAAGTATTCCCTACAAAAGTCCTAACAAATCTACAAGCTGCTTTGATCCTCTATACCTTTCCATTTGACTTTCTGAATGAAATTGTACCTATCTCCAGAGTATATACTATCCCTCTCACTCCAAGTAGTCCACTTGATGCAATGTAGAATTATCCTCCACCATTTCTTCTGGCTCTTGTTACCTCCTCTTCTGATCCAACAACTCAAAAATCTACAACATGCGTAGGAATGGTCCACTTTGTCTTTGTGAGACTGAAGAAGATTGTCCATCGTCCATCTCTTTTGTATATGTGCAGTGCAAAATAGGTCTCTGTCTGCTTCTGCATAGTATGTATCTGGATACAATATTTAACCCCCTTCTCTTCAAAACTTCATGTTGTCAAGCAATATCTCCTAGCTACCAACCATGTAAAGCATTTTACCTTCGTTGATGCTAGGTTTTTCCAAATATTCCTCCATACTTTTTGACGGTCTCTAACTTGCTGAACATTTCTTTTTTATAAGCCCTGTTTACTGTTAATACCCCCTCCTAACTGTGTTCCACCTCAAAAATGTCAGAGTCAGAAGTGGTACCTTTGAAATCCTCTATCCCTTTTAGAAAATTGGCACTCTATCCACCTTCCAGTCATTCAATAACTTGCTAAAGGATAAGTTCCATCCTTGTGGAGTCCAACATTTATTCATAGGAGCCTCAAGCGTTGTTCTGGAGAGCAAGAAGCGGAAAAAAGCGAAGAGCGCTTGCTTCACTGAAGCTGAAGCAAAGCACACATTTTTTTCTACTAAAGTGTTGTTCAGAACAAAAACAAAAAATAGTAATATGCATATATAAATAACCAAGAACTCAATAGATATAACATATTAAGCAAATCTTTCAGTTCTTAAATTAGAAAGCTTATAAAAGATGGTCAATAATCCTCATAATCATAACATATTAAGCAACTCGTAATCATAACATATTAAGCAAATGCAACATCAAAACCAAATAAGTAAATAGACAGAGCATAACAGGGGAAAGAAAACCCTAGAAGTAGTTCCTGAAAGCCTGAAAGAGAGTCCAGAGAAGACGAAGAAAAGAGATTAAGAGAGGAAGAACTTATCTTTTTGAGTCGCAGCAACAGATGTTGAAATGTTTGAGTCACAGAAGAAGAAGAAGAAGAGCGAAATGTTTAAGTCACAGCAGGCAAGTGTGTTATACAGAAGGAAAAAAAACCTAACAGCACTTAAGCACGCTTTTTGTCATCTTTGCTTTAAGCGCGCTTCAAGCTTCGCCTACTGAAGCACTCATTTTTTTAGCAGCGCCTCGCTTCAGACCATATAAGCGCAGTGCTTGCACCTCGCCTCGTTTCGCGCTTTAAGCGCGCTTTTTGTCGCTTTTCACAACACCCTAAGGATTATTTAAGGAGAAGTTCTATCTTTGTGGAGTCCAACATTAATTCATAGTAGCCTCGGGATTATTGCACAAGACAAACAGATCAGGAAAGTATTCCTTTAGAGGAGTCTGTTCATTCCAAGCATCCCTCCAAAATTTATTGTTCTATCATCTCCCACTTTAACTAACATGTTCACTTCTAACTTGGGCCACAAAGCTCTGATAGTTCTCCATACCCCAACACTTCTTATCGCTGCACCAAGGGCTGGACTCACCAAATTTGCATTTAACAACATCCTTCCATAAGGCTTGCCCTTGTCTTTTGTATCTCCATAGCCACTTCAACAGTTCCTGATGCCCAAAGCCCCCAAATCTTTGCTAAGTTTAACCAAACTAGTATTGGGAACGTACGATGCACGTTTGTCCCCTACAACTGCAAAAAATTTGGACATCGAGTGAAAGATTTATGGTGCTTTCAAAATAGAAACAATTCAATCACAATAAGTTAACTAAGATACATAGAGCCTTACAGCACGCCTCACGGGAAACCAAAGCTTGAAAACAATTTCAGGAATTAAATATGGAGAAACAAAAACTGACCTGAAAAATGCCTCTCCTACTTTCTAGGTGAGAGAGTACCCTCTGTTCGGTAGGTCACCACCAACCTCATCCTTCTCCTCAGCTATCTCCGTCTGTGATAGCTTTCTCCTTCCCTTACAGCAGTTCCCTTCCACAGACATGGAGGAAAATAGGATTTATTTCCACACCGGTTTCAAGTCATTCAATAATATCAGATGGATATCTGGGGAGGAAGCCTAGTTTGATTGGGTGGAGCTTAGTATAAACTTGATGAGAAGAATAAATCTCAGCAAAAAAATGATGGAGTGGATTTGTTTTCTCCTGGAAGAAGCCTCAAACGACAATAAGAATCTTATGAGGAGATTGAGAATGAACTATGAAGGACCAAATGGCAGAGTATTTTAGTACAAGGAAGTTTAATGCCCGCGGAAGACTACTCTTGGAGGATTGAGGCCATGAGCGTATAATTGGATTTATAAAAGTTGATTGGGTAGGATCACCCTTTTATAGATTTTCTATATCCGGATATTGTGTTTAGGAGGTCATTTGGTGGCTTAGAAGAGTAAGTAACAAAGTGTGGTTGATCTAGTGCAAAAGCAGAATACTGAGCAATAGTCATAGCAAGTTGTGAGCTAATTTAGATTAAACAGTTGCTGAGAGAACAATGATAATTGAATGAAAGAAAAACCACTGGTAGGGATATGAATGGAGTCTCGCTCAGTTAAGAGAGTTGTAGGATTCGTAAAATAGGAAAAGAGCATCTCAAAGTATGGGGCAAATGGAACTTGTGTGTGATAGCCAAATGTCCCTTCATATCACATCAAATCTGGTATTTCATCGGAGGACGAAGCACATTGAGATTGACTCTCACTTTGTCAAAGAAAGATAATCTCGGAAGATACTGTTACAAAATTTGTAAAGTTGAGTGATTAGCTTGCAAATGTCTTCACCAAGTCCCTCACCGGTCCTCGTATTAGTTACTGTTGGATATGTAGCAAGAATTGATGGGAAATAGAGGAAAGAAGAGGAATTTGAAGAGGAAAGAAGAGGAATTTGAAAAGTTTAGAACTTGAAAGGTTGGGAACTTGAAAAGTCCTCTAATGCTTTAATGAAAAAGGCAATAGTCCCTCATCGGTAATGGAAATGAAAATAGGAGAGTTTAAATAAATAAACACTCCTATTAATTGTTAAAAGGGTTGTAAAAAGGGACCCCCCTCGCGCCGTCGTCGTCGCTCGCTTCGGCGTCGGCTACGGCTTTGGCAAATGATCGAGAGATAATTTTTTGGACAAATTTATTTTAATTATTTATTTAATTAATTTAATGGCCAAAAATTATTTTCAATTAATTAGTTGATAACAGAAGTTAACCGAAATGTTTTCAACTTTTTAGTTAACCCGACCCAACTCGGATCGCGCACGTGACCCGTTTTAAATTCCGTTATATTTAAAAATTTCCGTCATGACTGTTCTGAAAGGTTGCAACTTTCAGGAACAATCAATACCATTTGAAAGTTTGCAACCTTTCATTAATGGTCGTGTCAATTCTGAAAGGGTTGCAACCTTTCAGAATATATTCTTCTTGCCTATAAATACCATTCAGTCTTCAGAATATTTTCCTCCGAATTTTCTAGATCTTCCTTCTTCTTAAAAACACATATTTCTTCGTGTACTTTCCTGCTGTGGATTGATTCGCTGACAGTAGAGTTTTTGGTATCTATACTCTACTGATTAAGATCATTTTACCTTGGGAGGTTATATTCCAAATCAAACCTCGGATACTAGAGGGGAATAATTTCCTTAAGGGGACACTGTGAATTCAGTGGACTTGATTTTCTTCCTATATTATTAAAAAAAGTATTCCAGATTCTGGTAAGTTTTAAAGATTCAATTTTTTTTTTTACCAATAAATTTCTGTTCACCTTTTTTACTGGTTCTAAAAATCTCAGTTACTTAGTGTTTCTGACTGATTTATTACAATCAGTAATTTCTGATTTTCATAACACAGATTGGCAACAGTTACATCTGTAAGAAGGTCGGTACATGTAACAAGGTCCGTACATATGACTTGTATGCACTAACTTGAGGGGGAGTGTCAAAATTGGAATATGAACAAGAATATAAATAGTATATGGAACTCTAATTGGATAAGGATTGCAATGTAGTGTCTATAAATAGGACATAGTGCAATAATGTAGAGACATAATTCAATAGTATATTTCTATTATATTTCTCATAGACACCTTTACTTGAGAGGCCTGAGCATGCATGCTTGTTCACTTTTAGTCAATATGCTAATTTCAGTTGATATCTTCTTAACATTGAGGTGAATGATCGTAGTTTTGCTTTGAGTTTAGTTTGATGAATGTCAGCTTATAATATTTCTACCGGGAACATGCTTTTACAGGAGAATTCCTCCAACATTGGCAAATTTATCAAAATTGGATGTGTTGATCAAGGATGGATGTGGGACTGCTACCGCACAAGTCAAAATACTAAATTCGGTAATTTATCTTTGTCAGGAAATTTGATATGTACATCCCATGCTCTAATATTCAGAAAATGATCTTCCTCTTCTAGTTATAGAATTGGAAATAAAACAATACTATTGTTTATGTTTTCTACAAACAAACGTCTTTGGGTTCGCAAACTAGTCATGCAGGGCAGTAACATAGGGATCGTTATGCGGTGAGTCATAGTGTAGTGATTTACTCACAGTGAGTAATAATCTATGGACTGTTCTACAATGAATAATATACAAGGATTGTCTACTTCAACAGCAGTTTTATGATCCCTAGATACTTTTTATCCAGGTATTGGTAATACAGTATTGTCATTCTACGATCTCTCCTCCATGAGATTATGTATAGTTTTCTGCATAAATTTGCCGCATTTGTATTTTTTTTTGATAACCAAATTTTTCGTTTTTGTATTTAAAAGTGCAACCTGAATTCTGCCTTAGTTATGTAGAGTTTGTACTTTGTACCGGAAACTACACATTATATTAGTTATTATGCAGAGATTATATTAATAACAGAGTTATGTGTTGCAAATCACTGTAATATTAGTTACGAGAAATTGAGATTATTACTCTTAGTTGGTCAATCAAATGCCCATGATGTGATATAACTGGTCAGCACCATATATCTTGCTTTCTTCCTCCTTTAATGCCTCACATCTGCTTGATAATTCGTACGCCAAGAGACACATTGATGGCAAGTGATGTTTTGGTCATGTTACCTAGAAAAATAGGTAGGACGAGATAACAAGCGCTAGATGTATAGCTCTATACTTTGACATTATTACAATACCAACTTATTGAAACATACGAAAACAGCTTAATAACAGAAACTTAGTAATTGAGGCCATTAACTTGCTGACAAGGTGGTAACAGTTTTACATTTACGTGTCACTTTTTAAAATCCTTATTTTGTATGACTATGTCTGTTTGGTATCTTGAATATCCTTTTGCAGCAGAAAGTAAAGCTAAGCGGAATAAAGCTGGAAGTGAATGATATAGGAAAATCTTAGCTTTACTGACTAGGGGATTAGGTACACAAACAAGATACATGCTTATTCTATCTCCAAATTTCCAGAAGTCTCTGTTCTTCAGTGTTTAGTTCACCTGTTCTCAGACTTTATTTAAGTTAAGAATTTTATGAATTTTGTGTAGCTAAAGATTTCCACAGCTAATGAGGTATCAAGAAGCTGCAATAGCAGTATTGCAATTCAAAACACAACAACAACAACAACATACCTAGTGAAATCCCACAAATTGAGGTTGTAGAGGGTAAAGTGTATGTAGACCTTATCCATACCTCGTGGCGGTAGAGATACTATTCCCGGGAGACCCTCGATTCAAGTGAAGCAGAATAAAGTAGTAATGAAAAGGAGAAACAACATTGAAGAAAACATGTCAACTAATAGGAAAGGAGTGCAGAGCATAAACATTAACAAAATAGTGCAATCACCTAAACATAATAAACAACAGATTGTAACAGATAACAAAAGCAAGAAACTACATGTATAAGAGTATTTATTGTGACAAACATGGTGCGCCAGAGTCCAGACTACTACCAAACCTAATCTCGTCAAAAATCAAGAAAACCCTCGACTACCTACTAACCTTCTACCCTAATCCATGACCTCCATACCTGCCTATCTAAGGTCGTGTCTTTAGTAAGCTAAAGTTGTAGCATGTCCTGTATAATCGCAATCTACCTAATACTTCTTCAGCCTACCTCTACCTCTCCTCATATCCACTATATCCAACCTCTCGCACCTTCCTTCACTAGGGCATCGACACATCTCTTCTTCAAATGTCCAAACCATCTTGGTCTTCCTTCCTCATCTTGTCCACCACAGAGGTCACTCTCACCTCTTCCCAGATACCCTCATTCTTAATCTTATCACTCCTAGTATGCCCACACTTAAATGTTATTTTAGTTACAAGCTCAAATTCTAGACTTGCATACAGTTCCCAAAAGAAAAGAAAAGAAATTCAACATCAATAGTACCGGATATTATCATATCATATTATATTATAAGTGGAAGCTCCAAGATGTAAAGTTGAATTACCATTTTATCCCTATACTAAATAAAAATGTTATATTCATATTTGATTATTTTGTTTTTGAAAAATATTGAGCAGTAAACGTTTTTTACTATTAATGAATTGAGAATATTTGAACAGTTATGAAAATTAAATAATCTAAACGTTAAAGAAAATGAAGAGACAAATGTTAGTTAATGAGAGCAAATAGGTAGAGATTTAAGTTGCACATTAACTAAAATATAGAAGCAGTTACCTTTACATTGCTAGAATCTTAAAAGTTGTAAATTTCAATACAATGAATCTCATAGTTAATTTATTAATATATGTTATTTTCAATGATAAATACATGAAAAGAAGCTAAAGAGACTAATTAATCATTTAAAGTGAAAGTATTATATAAAGCCAAGAATAGTTTTCATTTTCCTCAAGTTCCCTCTCCATTTTTATGGGCTCTAAAGAAGAGTATATCATTTCTCTGAGCAGTATTTTCTCAATCAATGTCAAAGTTAAAGGCTATTAAAATACGCTATGAGAGTTGTTGGATTTGTGCAAGAATTTCAGCTATGAATGTTGTTGGATTCATCAAAGAAATTTCTTAGTGAAGAATGCACTTATGACACTTATTATTTAATTTCCTTGTTAGGGCTTAATATATGCAACACACAACATTAATTTTACGGTAAAAGATTTCTATATGTTACTGATTTTACACATTTCATTAACGTAGCACATAAAATTTCACTTATTCAATTAAATATTGTAGTTGTATAGTTTTTTGGATTTTGGATCTTAGAAACAAAAACACCAGGATGCTTATCAATTTTAAGAACATGTAATTTGTATTTTCTATTTTATAACACATAATATAACTAAAAAATATTGCTAATCTACAATCTTCACAAAAATATTTTTTATGTATATGGCCACATGCACGTGGCGCGTACCCAGAAACTAGTTAACATAAGGAGGAGAAGATGAACAAAGTGTTAGGTCTTGATAAGCTATAAATAAAAAGCTTATGATGGTGTTAACAATGCTAGCTTGATCCACCTCGACTATTTCACCAGGAACCTACTACCTCCAACCAGCAGGTATCTGGTACTTCCTGCTCACCAAGGTTTAGACAAATAGAAAGAAAGCACCTCACTATTAAAAACTCAAAATGAGAAGTGTTTAAATAAGTTAGGGTCAACATTACTTAATATTCTTATTTTGATGAGGCAAAAGTGAATTGGGGCCTGTTCATGTGTTGATTCTTGATTTGCACTCAGTTTGAAACTTAAGAGGCTCATGCTCAGTTGCCTCATTATCACTTAGGCCTTGACCCCTGCTTCTTCAGGCTGGTAATTAGCTCTAGGCTGGTCAATATCAGTTGAGTTGTATTCTTCATATTGAGTCTTACACAAGGACTCAAGGTGTTGCATCTTTCAATTTATCGGTTGAGGTTTTTGTGAAATGTTAATGATATTATTAGTATATCTGATCATATGTATCTGAAGAGGTGAAATACTTTTTTGTGAAATGCAGATTGAGAATAAATTTATCA</genome_strand>
        <mrna_strand>CCTTGTACACCTATCGCCATTTTCCGAGGAGGGAGAAGAAGAAATGCAAGAAAGATGTTGAGGGTCTGTAGAGCTATGGTTGAGAAGACAGTACAAGGGGCTTCTTCTACTTTTGCTAAGGAAATGGAAAGGCTTTCAGCTAAAGAGTCTCTGCTTCTTGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAAAGATGCTGGTGGATTTGAAGCATTGGTCACTGGGAAGACAACAGATGTACAATGCATTGATGTGAATGAGAGGATTATTAGTCTCGAGAAGCTCAATCCGACGCCTCGTCCCTCAAC..............................................................................GTCTCCCAATTTGGAAGGACGATGGAATTTTGAGTGGTTTGGAGCTGGTAGCCCAGTTCTTCTTCTTGCCAAAATATTTTTTGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................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...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGAGAATAAATTTATCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E538064" ref_strand="+" ref_description="SGN-E538064 [TUS-56-P20]">
      <seq>attataattgcagacttaaaggagtataaaatcactaagatttttgtctccaccaaaaatacagatttaaataatttccttaagattgttgccaatctgtgttaagaaaatcagaaattactggttgtgataaatcattcagaaacacgaagtaactgagatttttagaaccactaaataagatgaacataaatttatttgtaaaaataatttaatctgtaaaacttaccagaatcttgaatactctttttgataatttaggaaaaaaatcaagtccactgaattcacagtgtccccttaaggaaattattcccctgtagtatccgaggtttgatttggaatataacctcccagggtaaaatgatcttaatcagtagagtatagataccaaaaactctactgtcagcgaatcaatccacaacaggaaagtacacgaagaaaaatgtgttttttaagaagtaggaagatcagaaaattcgttagtaaatattctgaagactgaatggtatttataggcaagaataatatattctgaaaggttgcaactctttcagaattgacacaaccattaatgaaaggttgcaaactttcaaatggtattgactgttcctgaaagttgcaacctttcagaacagtggcgggaatttttaaatataacggaatttaaaacgggtcacgcgcgcggatccgagtcgggtcgggttaactaaaaagttgaaaacaattcggttaatttctgttatcaactgattaattgaaaataatttttggccatttaannttattaataaataattaaaataatttgtccaaaaaatatctctcgatcatttgccaagtcgaagccgagcgagcga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C03HBa0013A17.1" temp_strand="+" temp_description="C03HBa0013A17.1  AC238559.1 htgs_phase:2 submitted_to_sgn_as:gi|261249975|gb|AC238559.1| upload_account_name:jianfeng-ren Solanum lycopersicum chromosome 3 clone C03HBa0013a17, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces">
        <position start="13591" stop="14974"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13886" g_stop="14674" g_length="789"/>
          <reference_exon_boundary r_type="cDNA" r_start="82" r_stop="857" r_length="776" r_score="0.914"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C03HBa0013A17.1" gen_strand="+" ref_id="SGN-E538064" ref_strand="+">
        <total_alignment_score>0.914</total_alignment_score>
        <cumulative_length_of_scored_exons>789</cumulative_length_of_scored_exons>
        <coverage percentage="0.921" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C03HBa0013A17.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E538064" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13886" e_stop="14674"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGTAACTGTTGCCAATCTGTGTTATGAAAATCAGAAATTACTGATTGTAATAAATCAGTCAGAAACACTAAGTAACTGAGATTTTTAGAACCAGTAAAAAAGGTGAACAGAAATTTATTGGTAAAAAAAAAAATTGAATCTTTAAAACTTACCAGAATCTGGAATACTTTTTTTAATAATATAGGAAGAAAATCAAGTCCACTGAATTCACAGTGTCCCCTTAAGGAAATTATTCCCCTCTAGTATCCGAGGTTTGATTTGGAATATAACCTCCCAAGGTAAAATGATCTTAATCAGTAGAGTATAGATACCAAAAACTCTACTGTCAGCGAATCAATCCACAGCAGGAAAGTACACGAAGAAATATGTG-TTTTTAAGAAGAAGGAAGATCTAGAAAATTCGGAGGAAAATATTCTGAAGACTGAATGGTATTTATAGGCAAGAAGAATATATTCTGAAAGGTTGCAACCCTTTCAGAATTGACACGACCATTAATGAAAGGTTGCAAACTTTCAAATGGTATTGATTGTTCCTGAAAGTTGCAACCTTTCAGAACAGTCATGACGGAAATTTTTAAATATAACGGAATTTAAAACGGGTCACGTGCGC-GATCCGAGTTGGGTCGGGTTAACTAAAAAGTTGAAAACATTTCGGTTAACTTCTGTTATCAACTAATTAATTGAAAATAATTTTTGGCCATTAAATTAATTAAATAAATAATTAAAATAAATTTGTCCAAAAAATTATCTCTCGATCATTTGCCAAAGCCGTAGCCGACGCCGAAGCGA</genome_strand>
        <mrna_strand>AAG-A-TTGTTGCCAATCTGTGTTAAGAAAATCAGAAATTACTGGTTGTGATAAATCATTCAGAAACACGAAGTAACTGAGATTTTTAGAACCACTAAATAAGATGAACATAAATTTATTTGT---AAAAATAATTTAATCTGTAAAACTTACCAGAATCTTGAATACTCTTTTTGATAATTTAGGAAAAAAATCAAGTCCACTGAATTCACAGTGTCCCCTTAAGGAAATTATTCCCCTGTAGTATCCGAGGTTTGATTTGGAATATAACCTCCCAGGGTAAAATGATCTTAATCAGTAGAGTATAGATACCAAAAACTCTACTGTCAGCGAATCAATCCACAACAGGAAAGTACACGAAGAAAAATGTGTTTTTTAAGAAGTAGGAAGATC-AGAAAATTCGTTAGTAAATATTCTGAAGACTGAATGGTATTTATAGGCAAGAATAATATATTCTGAAAGGTTGCAACTCTTTCAGAATTGACACAACCATTAATGAAAGGTTGCAAACTTTCAAATGGTATTGACTGTTCCTGAAAGTTGCAACCTTTCAGAACAG---TGGCGGGAATTTTTAAATATAACGGAATTTAAAACGGGTCACGCGCGCGGATCCGAGTCGGGTCGGGTTAACTAAAAAGTTGAAAACAATTCGGTTAATTTCTGTTATCAACTGATTAATTGAAAATAATTTTTGGCCATTTAANNTTATTAATAAATAATTAAAAT-AATTTGTCCAAAAAA-TATCTCTCGATCATTTGCC-AAGTCGAAGCCGA-G-CG-AGCGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E335973" ref_strand="+" ref_description="SGN-E335973 [cTOE-6-F7]">
      <seq>ttcacttcaaaatttggtaccaccattttcttgccggcgtacgacctatacatctccttgtacacctatcgccattttccgaggagggagaagaagaaatgcaagaaagatgttgagggtctgtagagctatggttgagaagacagtacaaggggcttcttctacttttgctaaggaaatggaaaggctttcagctaaagagtctctgcttcttgcattcaaagatgctggtggatttgaagcattggtcactgggaagacaacagatgtacaatgcattgatgtgaatgagaggattattagtctcgagaagctcaatccgacgcctcgtccctcaacgtctcccaatttggaaggacgatggaattttgagtggtttggagctggtagcccagttcttcttcttgccaaaatattttttgggaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C03HBa0013A17.1" temp_strand="-" temp_description="C03HBa0013A17.1  AC238559.1 htgs_phase:2 submitted_to_sgn_as:gi|261249975|gb|AC238559.1| upload_account_name:jianfeng-ren Solanum lycopersicum chromosome 3 clone C03HBa0013a17, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces">
        <position start="22629" stop="19195"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22329" g_stop="22113" g_length="217"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="217" r_length="217" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="22112" i_stop="19780" i_length="2333">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19779" g_stop="19658" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="218" r_stop="339" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19657" i_stop="19580" i_length="78">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19579" g_stop="19496" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="340" r_stop="423" r_length="84" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C03HBa0013A17.1" gen_strand="-" ref_id="SGN-E335973" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>423</cumulative_length_of_scored_exons>
        <coverage percentage="0.991" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C03HBa0013A17.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E335973" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22329" e_stop="22113"/>
          <exon e_start="19779" e_stop="19658"/>
          <exon e_start="19579" e_stop="19496"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCACTTCAAAATTTGGTACCACCATTTTCTTGCCGGCGTACGACCTATACATCTCCTTGTACACCTATCGCCATTTTCCGAGGAGGGAGAAGAAGAAATGCAAGAAAGATGTTGAGGGTCTGTAGAGCTATGGTTGAGAAGACAGTACAAGGGGCTTCTTCTACTTTTGCTAAGGAAATGGAAAGGCTTTCAGCTAAAGAGTCTCTGCTTCTTGCAGTTAGTGCTTATCCCTTTTTACTCCAATTTATTTGTTTTTTCCTATTTAAGTTTAAGTAACTCATTAAAATTGTGGAAAATTTGAGGGGAGTGTTAAGAGTGTCTCGCATTAGTTATGTGAATGATTTGTTGTCTTCTAATATGTTTTTGGGAAAGGCATTTCTCACCTCGCCAGCTAAATTTTTGTGTTGAAGGTCTATATTATTAACAATAGTTATGTTTATGTTTGTGTTGCTTGTTTTAATTTAAGAGTAGTTTGTAAATCCAACTTGTACTAGGTAATCATAGGTATCTATTGGGATACTCATGGACATTCTCTCTGCCACTTGTAGATTATTGTCATGTCTACTTCTTATTTAATGGCCCATTCTATTTAATAGACTTAAATGATAGAATTCACAGCAGTACATAAACAAAAGGCAATATGACCCTTAACTTGGCGATAGCGGACAATTATGAACGTCTATTATGGATGTGTACAAGTAAGCACTTAAACTTGTATAAAATTGAATAAATAGACACAATCGTCCTACATGACAATTTTGTGTCCTGTATGGCGTCCTATGTGTATTGTCCGCTGGAGCCAAGTTTAGGGTCAACTCTATGTATTATGCCTAAACAAAATAACTAAAAGAAAAATCAAGAACGGTGGTGTAGACTGACAGCAGAGATCTATTCTCTTTGTTTCATTTTACTTGACACTTTCTTTTTTAGTATGTTAAAAAGAATGACATCTTTCTATTTTTATGGAGAATTGTCATTCATGACAAGTATGGTCAAGATGACCAGTGATGTCCAAAGGTGGTTGTGAGCCCCCATGGTGTAGGAGTTTGGAAAGCAATCAGATCCCTTTGGTCTTTGATGGCTGGAAAAATTAGTTTAAGAGTGGGCAATGGAAGGAAAATTGTTCTTTTGGGGTGATAATTGACTGGGGCATGGACCTCTAAGGGAAGTCTTCCCTGAATTCTTTAGCATTGCCACTATGCCGAACATTAATTTGGAATCAGCAAAAAGAGTACAGGGATGGAATTTACTGTTAGAAGGCTACTGCATGATTGGGAGCTGGAAAGAGTTGTTGAATTTTTCCAGACCTTGAAATCATTCTAAGGGTTCAAAGATATTGAAGACTCACTTATATGGAAGCCTACCGGTATATGACCTAATTCTGTTAACTTAGCTTATAGCATTCTGATTAGGCACAGACAGTCAACTAATTAGAGTCCATGGAGATCCATTTGGAAGATGAAGGCTCCTTTTTAGGTGGTATGCTTTTCTTGGTTAGTAGCAACAAATGCTTGCCTCACACAGGATAAAGTATAAACTTCAAAAAAGGGGATTCCAACTGTGTTCTAGATGCTTTTTGTGCGGAGCTGCTAGGGAAAATAATAGTAACCTATTCATTCATTGTCCTGTTACTGGACAATTAAGACAACTATTCTTGAACATGTTAGGAATCAGATGATCAGTGCCAACAAGTGTTAATCTACTGAGATGTTGGAACCAGAATGATGGGGCAGTTAGTCAGAAAAATTGGTGGAAACTTGTCCCTGCTTGCGTATGGTTAGATCATTTAGAAGGAGCGGAACTATAGAGCTTTTGAAAGAAAAATACAATTTTGTGGCGATAATCAAGATGAACTGTATACTTTTGTTTTGTTTTTGGTGTAAAGAAATCTATGCTAAGGAGGCTGAATTACTAGTTGATATGATAGAATCCTTGTGAAGCAGTAGCCTAAGCTAAGCTTGGTTGGGATCTTGTTGTGTCTTTTGCACTGTCATCGTGCAACTTATATATATATATATATATATATATAGTTGTTGCCAGTTTCAAAGAACACACACATTTAACTTTAAACTTCTCATTTACCCTAAATAACATGATTTTGTAGGTACATAAATGTCATGACATGCTTAAGGCCACATGTTTGATAACTCTTTTTTCTTTTATAAATTTCATGTACAGTTTCACATAAAATAAGGTGGGTATTATATGTACTCTTGTCTCTTTACTTTTTTTCCTGCAATTCATAATTTTCCTTTGTTTAAATTCTTTCATTGTTTCTCTATGATTGACTCATCAAAGAATTGGCCTTGGGTAAAGTGAACGTTCTAATATATCCCATTTCCATTTGAGAAAAGGCTCAGGGAATGGTGGAAAGAGTGTCACAGGAGATACAAAGTTGTCAGGTCTGCAGGAGGGTTAACTTGGTGGAACCGAGAGGTTTAGAGAACAATATTATTGATAATATTGCAATGGTTATTTTCATGAAATTGCACTTCTGTTCTTTCTTTCTGTCCCTTAAGCACTAAAAGAAATTAATTACACTGTTATAGTTCAAAGATGCTGGTGGATTTGAAGCATTGGTCACTGGGAAGACAACAGATGTACAATGCATTGATGTGAATGAGAGGATTATTAGTCTCGAGAAGCTCAATCCGACGCCTCGTCCCTCAACGTAAGGTGTTAAATCTTACCAATAAACTTAATTTTCAAGATTCTTGACAAGGTACTCATTGGTGGTTTCATTTCCCAGGTCTCCCAATTTGGAAGGACGATGGAATTTTGAGTGGTTTGGAGCTGGTAGCCCAGTTCTTCTTCTTGCCAAAATATTTTTTGG</genome_strand>
        <mrna_strand>TTCACTTCAAAATTTGGTACCACCATTTTCTTGCCGGCGTACGACCTATACATCTCCTTGTACACCTATCGCCATTTTCCGAGGAGGGAGAAGAAGAAATGCAAGAAAGATGTTGAGGGTCTGTAGAGCTATGGTTGAGAAGACAGTACAAGGGGCTTCTTCTACTTTTGCTAAGGAAATGGAAAGGCTTTCAGCTAAAGAGTCTCTGCTTCTTGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAAAGATGCTGGTGGATTTGAAGCATTGGTCACTGGGAAGACAACAGATGTACAATGCATTGATGTGAATGAGAGGATTATTAGTCTCGAGAAGCTCAATCCGACGCCTCGTCCCTCAAC..............................................................................GTCTCCCAATTTGGAAGGACGATGGAATTTTGAGTGGTTTGGAGCTGGTAGCCCAGTTCTTCTTCTTGCCAAAATATTTTTTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E225301" ref_strand="+" ref_description="SGN-E225301 [cLEL-17-M21](-)">
      <seq>ggcaccaggttccattctttctaatcacttatctagtagtaaaaagtcttcctgatttgagttgttcaaaattgacttatgatgtgtgcagactgaacttataagatgggacacatccacattcaattcattatcagattaacatcgattgtgacaactgatacaagaatcaatgaaacacataatatatccaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C03HBa0013A17.1" temp_strand="-" temp_description="C03HBa0013A17.1  AC238559.1 htgs_phase:2 submitted_to_sgn_as:gi|261249975|gb|AC238559.1| upload_account_name:jianfeng-ren Solanum lycopersicum chromosome 3 clone C03HBa0013a17, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces">
        <position start="80045" stop="79252"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79752" g_stop="79545" g_length="208"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="209" r_length="209" r_score="0.928"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C03HBa0013A17.1" gen_strand="-" ref_id="SGN-E225301" ref_strand="+">
        <total_alignment_score>0.928</total_alignment_score>
        <cumulative_length_of_scored_exons>208</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C03HBa0013A17.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E225301" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79752" e_stop="79545"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTGATA-GTTCCATTCTTTCTAATCACTTATCTAGTAGTAAAAAGTCTTCCTGATTTGAGTTGTTCAAAATTGACTTATGATGTGTGCAGACTGAACTTATAAGATGGGACACATCCACATTCAATTCATTATCAGATTAACATCGATTGTGACAACTGATACAAGAATCAATGAAACACATAATATATCCAACCAAACAATTTTCAC</genome_strand>
        <mrna_strand>GGCACCAGGTTCCATTCTTTCTAATCACTTATCTAGTAGTAAAAAGTCTTCCTGATTTGAGTTGTTCAAAATTGACTTATGATGTGTGCAGACTGAACTTATAAGATGGGACACATCCACATTCAATTCATTATCAGATTAACATCGATTGTGACAACTGATACAAGAATCAATGAAACACATAATATATCCAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E225473" ref_strand="+" ref_description="SGN-E225473 [cLEL-17-M21](-)">
      <seq>ggcaccaggttccattctttctaatcacttatctagtagtaaaaagtcttcctgatttgagttgttcaaaattgacttatgatgtgtgcagactgaacttataagatgggacacatccacattcaattcattatcagattaacatcgattgtgacaactgatacaagaatcaatgaaacacataatatatccaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C03HBa0013A17.1" temp_strand="-" temp_description="C03HBa0013A17.1  AC238559.1 htgs_phase:2 submitted_to_sgn_as:gi|261249975|gb|AC238559.1| upload_account_name:jianfeng-ren Solanum lycopersicum chromosome 3 clone C03HBa0013a17, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces">
        <position start="80045" stop="79252"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79752" g_stop="79545" g_length="208"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="209" r_length="209" r_score="0.928"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C03HBa0013A17.1" gen_strand="-" ref_id="SGN-E225473" ref_strand="+">
        <total_alignment_score>0.928</total_alignment_score>
        <cumulative_length_of_scored_exons>208</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C03HBa0013A17.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E225473" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79752" e_stop="79545"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTGATA-GTTCCATTCTTTCTAATCACTTATCTAGTAGTAAAAAGTCTTCCTGATTTGAGTTGTTCAAAATTGACTTATGATGTGTGCAGACTGAACTTATAAGATGGGACACATCCACATTCAATTCATTATCAGATTAACATCGATTGTGACAACTGATACAAGAATCAATGAAACACATAATATATCCAACCAAACAATTTTCAC</genome_strand>
        <mrna_strand>GGCACCAGGTTCCATTCTTTCTAATCACTTATCTAGTAGTAAAAAGTCTTCCTGATTTGAGTTGTTCAAAATTGACTTATGATGTGTGCAGACTGAACTTATAAGATGGGACACATCCACATTCAATTCATTATCAGATTAACATCGATTGTGACAACTGATACAAGAATCAATGAAACACATAATATATCCAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E548395" ref_strand="+" ref_description="SGN-E548395 [TUS-60-M24](-)">
      <seq>gccagttttgcgggggcccaaataagcatgagatacctgatggtgaagaaaaggtgagagctatctgcactcattgtgggaagattacatatgagaatccaaaaatggttgttggttgccttattgagcatgataagaagatattaatgtgcaggcgcaaaattcacccatcatatggactttggacgctcccagctggctatatggagattggtgaatctgctgctgagggagcaattagggaaacctgggaagaggcaaatgcagaagtagaggttcaatcactttttgctcaattggacatccctcttataggacaaacgtacatgatttttttggcaaaactgaaaaatccccacttttcacctggtccagaatcatcagaatgtcagctttttgaacttgatgatattccttttgattctttagcattttcatcaatgctagtaagcttgaatctgtacatagaagatattaaagttggaagaccgaagttccattatggcgtcattaacaagaggcctggaacaagcccttctgatatccatgcttacactctggattttcatatgcaatcctgagaagcagatacaatattttcaagcactagaatgcggttggtatgttcgtcaagactgaaacagctccggtgttttcatcaaagctttagttgtgtacttgtggtgatagttccattctttctaatcacttatctagtagtaaaaagtcttcctgatttgagttgttcaaaattgacttatgatgtgtgcagactgaacttataagatgggacacatccacattcaattcattatcagattaacatcgaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C03HBa0013A17.1" temp_strand="-" temp_description="C03HBa0013A17.1  AC238559.1 htgs_phase:2 submitted_to_sgn_as:gi|261249975|gb|AC238559.1| upload_account_name:jianfeng-ren Solanum lycopersicum chromosome 3 clone C03HBa0013a17, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces">
        <position start="86329" stop="79306"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="86029" g_stop="85923" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="107" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="85922" i_stop="83303" i_length="2620">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.954" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="83302" g_stop="83226" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="108" r_stop="184" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="83225" i_stop="83064" i_length="162">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="83063" g_stop="82928" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="185" r_stop="320" r_length="136" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="82927" i_stop="82842" i_length="86">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="82841" g_stop="82701" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="321" r_stop="461" r_length="141" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="82700" i_stop="82580" i_length="121">
            <donor d_prob="0.797" d_score="1.00"/>
            <acceptor a_prob="0.905" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="82579" g_stop="82521" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="462" r_stop="520" r_length="59" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="82520" i_stop="79915" i_length="2606">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="79914" g_stop="79596" g_length="319"/>
          <reference_exon_boundary r_type="cDNA" r_start="521" r_stop="839" r_length="319" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C03HBa0013A17.1" gen_strand="-" ref_id="SGN-E548395" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>839</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C03HBa0013A17.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E548395" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="86029" e_stop="85923"/>
          <exon e_start="83302" e_stop="83226"/>
          <exon e_start="83063" e_stop="82928"/>
          <exon e_start="82841" e_stop="82701"/>
          <exon e_start="82579" e_stop="82521"/>
          <exon e_start="79914" e_stop="79596"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCAGTTTTGCGGGGGCCCAAATAAGCATGAGATACCTGATGGTGAAGAAAAGGTGAGAGCTATCTGCACTCATTGTGGGAAGATTACATATGAGAATCCAAAAATGGTAAGATTTTCATTAAGCTTCACTGTTCCGCTTGTATTCTTGATTAAATGCAGATTAATCATTGTATTCTTTCTCAAAAAAAAAAAAAACTCATTGTATTACCTCTTGCAATCGTAATGACCACATTATTTTCCTTTGTCTTTTCAGTGCCTACATGTTTGGTGGTCAAATTTCAGTATTAATGATGTGGGAATATTCATTTTTGTTTAGAACCAGCTATAATCACCCAGCCAAATCAATTTGGTGACAGTGGTTCAATTCGATGGTTTGAATTTTGTTTATGATTTTATTTTTGGTTTCATATGGGGGACAGTTTCAAATATGTATACACCTAATCATATCGAAAGGTGTAGTACAGTGGTCATTGAGGTGAGTACAAATCTAAGAGATCAGGGTTCAAATCCCCGTTGAGACAAAAGAAGAACACTAGATTATTTCTTCTCTATCTGCCTAAGATTTGGAAGTTTGCCACATAATGTACTATGCTTCTTTTAGTAGACCTCTTTAAGGTCATGGTACATCTTCGTGGAACCAGGATGAATAGAATACCATGGGCAAGGTGCTTCACTCATAATGTTCTCTTGAAGCGCTTCATTATCGGGAACATATAATCTGTCTTGGCAGCTTAAGGTGCCATCTCCTGCGAGCTTAAATCCTGTGACTTCTACGTTGGCGGATCCTCTCTTTATACTGAAGTAACAAGGGGTCATCACACTTCTTCTCTTTCACTGTTGCCGTTAAGGATGACGTTGTAGTATACTGGACAACTACTTCACCATCTTCAGAGTCCATGAGTCGGACTCCAAAGCTTGCTAATCCTATGTGCTAAACTCCCCATATACAGTTGGGATTTGATAAATATGATAGACAATACTTTGTTTGTTTATTCATAGTCTCCCCCTACTTTTGCTCTCATGAATCTTAGATTATAATTACCTTTTGGTGTTGAGTCTTCTTGTATATATTCAAACCCTTACCTATTCAAAAAAAAAGAAGTGGTTTTTGCCTTACATACCTTGTTAGTGTATTACCATGATCAATTACTCCGTTGCAGCTTCAATCTACCAGAATGACGATAATAACACTAACATAAGCAGCAAATCAAGAAGCTCGGCCAGTCACTCAATATGACAAACATTTGACAAGTGACAAGCTCACTAAATTCTCAATTTATGACATACTTCATATCTAAGCTTTCTTGTCAAAATTAACAGCTCAACCGCTTACTACGAGACCATCTACCTTCCTCCAATCATATAACAACCAAAACAACCATCCATGCATATCAATTACTGCAAGTTAGTTTATTGAAAAGGGAAAAACTGCTTCCGATCACCACCCCGTGAGTCGAGCTTGTAAACTATACTTAAAAGGCCATTAGAATCTCTTGTATGTTGGTAGAAGAACATTCATACCTCACTTAGAAAGTTCAGCAAAGAACATACTGAACCTTCGAGAAACAACATGGGTAAGGATGATTCATGAGCTAGGATGAAGACTTTCACTTGATTCCGTGGAAAATTCACTTGGCTTGAACTTAGGTGGTGTGGAGGACAAAATCTCTTGAGAGACGGTCCAAAACGTGAAAGAACAAATGCCAAATGAAATCCTAAGCCCTAACTTATAAAACAAAAGTTTTGGCTGCCATACCCTTGGGTGCCATGTGTTCCACATGCAATTAGGGTCTGCGCAGGTCTTTAGTAAAGTATGCATAACTTCTTGTAATGAAGTCAGATTGACGAGTGGTCTGTCTCATGGGAAACTAGATCACATAACTCCTCACAGTCTAGGAGATATACTCGTTCAGAGTTGACCCTTTCGCGGCACGTAAAGGATAAACCATTCGTAGTCGCTTTTGGCTTGACTTAAACAATAAATCTTTATGAATCTGTAACCTTGTATCACCATAATAGACTGACCCTTAACTTATATACTCATTCTTGACCGTCCCGTGGTTGGACCAATTCATTGATGTTAGACTAGTCGTACTTGAACTTATAGGCACAGGGTATAACAGTTAACCCTGAGTATGTACTAGTGGGAGATAGCAGGTATCTGGACTAGTCGAGGTGCATGCAAATTCGACTCCACACCATCGTTATAAACAGATAATATACCTAATTGCACCTAGTAATCAATATAGAACGTTTGGCAAAATGCTGCAGTGCAGCACAGGTTTTTGCTTGGTCTTTGTAATTCTGAGGTTAAAGAGACTATTGAGACCCTGTTTTGTTTTATGTTGTATTTTGGAATAATGGTTTGGGAGCTTGCTAAACTTCAGGTCATTTTTTCATGGGGAAACAGTTGTGGTTATTTTACCCATTTGAGCTGCACACCTCCAGGAGGGATGCTCAAGTGTGCTCTCGAAGAGCAGCCCTCCACAGAAATCTTAGTGATTCTAGTTGTTCACTAATATGAACCTCATGGAGTATAGTTGTTCTTATTGTAAACTTTGAGGTCATAAGACCAAAATTACTCTTTTCATAGCACATGAATTAACATTGTTCTTTCTCCCATTGTTGGTATTAATATTCATTTGTGCAACACACATCAATCCCGGAACTTATTCCTGCTTCTTACTAAGGGGGTAATATTTGTAACGCTTTGTTCTCAAATTCAGGTTGTTGGTTGCCTTATTGAGCATGATAAGAAGATATTAATGTGCAGGCGCAAAATTCACCCATCATATGGACTTTGGTATGTGTCTACCAACAGAGTTTAGTGAGAAGGGAGGACTTCCTTCCACAACCTCTAAGAAAGTTCTCTATTAGTACCCAGAATTCAGAAATGTAGAGAGTACTGAAGTAATTCGAATTCCAGTATAGTAAAGTTTATCTTCAAATAATGTTGTACTGGTAGGACGCTCCCAGCTGGCTATATGGAGATTGGTGAATCTGCTGCTGAGGGAGCAATTAGGGAAACCTGGGAAGAGGCAAATGCAGAAGTAGAGGTTCAATCACTTTTTGCTCAATTGGACATCCCTCTTATAGGACAAGTTAGTATAAATTCTTGAAGATGGCATTTACCTCCTATGAATTATGACCGATATTGGTGATAATTATTTTTTCCTCATCTTTGCAGACGTACATGATTTTTTTGGCAAAACTGAAAAATCCCCACTTTTCACCTGGTCCAGAATCATCAGAATGTCAGCTTTTTGAACTTGATGATATTCCTTTTGATTCTTTAGCATTTTCATCAATGCTAGTAAGCTTGAATCTGGTAATTTTTTATGCTACATGGTTAAATATTAACTTTACAGAAAATATATATATGTGTGTGTTCATTTGCTTGCTCGCGCTAAAGTTAAATTATATCTCTCTCTTATTTCATCTCATTGTAGTACATAGAAGATATTAAAGTTGGAAGACCGAAGTTCCATTATGGCGTCATTAACAAGAGGTATGTTGGTCACCCTATGTTATAGTGTTCACTTAGTTCTAAGATCCTCAACAAAGCTTTAGTGATTTGTTGTTATGTAGCTAAAACTCTTTAAAATCATTGTCACACCTGTATTGATACAACATGGATGTGAGTGTAGGTGTGGGATAGATAGGATTTGGTCAACTTACCTTGGGTACTTTGACTACATCTATGGGCGAGAAGTATAGATTAATTGGGTATTTAGTTTGATTTTTGGGTTTATATAGTATGACTATGAGCATGTTTTACTATTATATCTTATCTTATGAATAAATATTACTCCTACTATCCAAATTTATGTGGAATGCTTTCCTTTTTAGTCTGTCCAAAAAGGAATGTGACCTTTCTATAATTAGAAATAACTTGACTTTAAATTTTTCCTTTTACCCTTGATGAAATGATTTATAGCCACACAAATACCTCAGGTTTGTTTTAGACCACATATTTCAAGTCTTTTCTTTTTTTCTTGAACTTTGTATTTCTGCACCCGAGTCCAAGCAACTTAGGTCTATTGTTCAAAGCATGCTAGGTAGTCCTATTTGAATATGTATGACAATTTAACAGAGAGCACTTCCGATATGAATATTATTTGTAGCTCAACTAATAAGATGAAATGTCATTTGTTTGATGAAGTAACTGATAGGAGAAATCCCAAACTATAAATGTTCTTTTATTCCCTGTTCTGCAAAGGTGCTGTATTTCTTTCTCATATTAGGTCACTAGAGTGTTGGCTAAAAACTGTCTCTATATTTCTCATTTTGCTGGAGAGGCTCCACTATCAGTCTTCTCGATATTAGCAAGCTATGGATTGTATCATCTTGTCTTTAAATATCATTTGACTGGAAAAGAGAGAAGATCCTCTCATAGTAACTTGATTAACGTCAGTACTATGGGTATGCCTTACAATGGTGGTGGTTATGCATTTTTACGCTCTCCATTCAAATTTATTTCTCAATTCTTTGGCCTTAAAATTAATTTCTCACTTCGTTGCGCTTCAAATTAAGTTCTCCCACTGTTGTCAAAGGCACACTTAAAGCACGCTTAAGCCCTAAAGTGAGGCTCAAAACACGGTGAGCGCTTCGCCTCGCCTTATATGTGCTTCAGTGTCGTCATCAAGGTTCTAAGGCATATTTATCCTTGCCAATGAGCCTTTGTTGAAGAGGCACACTAAACAATTGATATTTAACGTTATCATAATTTCTTTGTTTATATAATTGTCATTCATGTTTATAATTATTAGTTTTGGACAAAACATATATATATTTGTAATTTCCTCTTTGCGCCTTTTTTCATGAATGCCCATGCTTTATTTGCGCTTTTCACTTAAAGCCCCAATGGACCTTAGAGCTTTTTTGGGCTTTTTGCCTTTGATAACACTGAGTTCTCTGAAATTGCAATTTACTTTGCAAGACCAGCCCCAACTCTATGGAGCCGCATTGGCCCCTCTTACTATCCTAATCTTTGGTGAAGCGTAAATTAGTGTATAGAGTAGTTAGCTGTCTCTACAGTGGCAAGTTCATGTTTTTATTTCCTTTTAGCTCCTTCGATTGGGATGACTTAAGCTGGTAGGGTACCCATTTGTTTCTTCTAACATTTATTAGAACTCTGGATGTGATGAGCACCCAAGACTGCAACCCAGCTGTCAATGAGGTGGGAGAAAACCTTGGTGACCAGGGATCAAATCCCAACAAAGACAAACAAGGCTAGTTCATTTCCCCTTGTCTTTCTAACCTTTGTCGACAGAGTTACTCTATACCTATGCTGGTGAGAGGACAGGTACTGGCGGAATAATTGAGGTGCACACAAGTTGGCTCCGATACAATTATTATCTCCCCCCTACCCCCCCCCCCCCCCCAAAAAAAAAAGGATTGGATTAACATGCATGCGCAGGCTGAATCAAACACCACTGTTATCCAAAAAAATAAGCAGATTGGATTGACATGCATTTCGTCGTATATAACCCTATCTCTCAGTGGAATAATATGGCTGCAGATGTAAGGTAACACGTTTTGACCTGGGAGTAAATGTCTCATACAATTTGACTTTTAAGTTGAGATACATGTTATTACTCCCCCATTATTCAGTTCTTCTTAGATACTCCTTCTGTCCAACAATACTTGTCCACTATTGACTTTTTACACTTTCTTAAAAAACTATAAATGGAAAAGGTAAATTTACTATATCATCCTTTACATATTATAAATACAAATGTCTTGAAAAAAAGTAACATTGAAATGACTTAATTAATGATAAAGGTGAATTAGGAACTAAGTATAAAATTATCCATTGATTTCATCAAGTGGACAAGTATTGTTGAACATCCAAATAGTATAGTGGACAACTATTGTTGGACGGATGGAGTATTAGCTTATTTTTCCACTTCCGATGCTTGATTTCAAGGGCTGAGCATTTGCTGAAAACTAGGATGTTGAAGAGTTGAAGACTAAAATAGTTAGACCTGGGAATATGTATGTTGTTTGAAAGTTGAAACTGCACTACACTATGGCTCTTGGCTTTTTTTTCTGCCAAGAGCTTTTCTTTGAACTGTATTTCCTTATTCCTTTCCATTGCTTATGTGTTTCCAGGCCTGGAACAAGCCCTTCTGATATCCATGCTTACACTCTGGATTTTCATATGCAATCCTGAGAAGCAGATACAATATTTTCAAGCACTAGAATGCGGTTGGTATGTTCGTCAAGACTGAAACAGCTCCGGTGTTTTCATCAAAGCTTTAGTTGTGTACTTGTGGTGATAGTTCCATTCTTTCTAATCACTTATCTAGTAGTAAAAAGTCTTCCTGATTTGAGTTGTTCAAAATTGACTTATGATGTGTGCAGACTGAACTTATAAGATGGGACACATCCACATTCAATTCATTATCAGATTAACATCGATTGTGACAAC</genome_strand>
        <mrna_strand>GCCAGTTTTGCGGGGGCCCAAATAAGCATGAGATACCTGATGGTGAAGAAAAGGTGAGAGCTATCTGCACTCATTGTGGGAAGATTACATATGAGAATCCAAAAATG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTTGGTTGCCTTATTGAGCATGATAAGAAGATATTAATGTGCAGGCGCAAAATTCACCCATCATATGGACTTTG..................................................................................................................................................................GACGCTCCCAGCTGGCTATATGGAGATTGGTGAATCTGCTGCTGAGGGAGCAATTAGGGAAACCTGGGAAGAGGCAAATGCAGAAGTAGAGGTTCAATCACTTTTTGCTCAATTGGACATCCCTCTTATAGGACAA......................................................................................ACGTACATGATTTTTTTGGCAAAACTGAAAAATCCCCACTTTTCACCTGGTCCAGAATCATCAGAATGTCAGCTTTTTGAACTTGATGATATTCCTTTTGATTCTTTAGCATTTTCATCAATGCTAGTAAGCTTGAATCTG.........................................................................................................................TACATAGAAGATATTAAAGTTGGAAGACCGAAGTTCCATTATGGCGTCATTAACAAGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTGGAACAAGCCCTTCTGATATCCATGCTTACACTCTGGATTTTCATATGCAATCCTGAGAAGCAGATACAATATTTTCAAGCACTAGAATGCGGTTGGTATGTTCGTCAAGACTGAAACAGCTCCGGTGTTTTCATCAAAGCTTTAGTTGTGTACTTGTGGTGATAGTTCCATTCTTTCTAATCACTTATCTAGTAGTAAAAAGTCTTCCTGATTTGAGTTGTTCAAAATTGACTTATGATGTGTGCAGACTGAACTTATAAGATGGGACACATCCACATTCAATTCATTATCAGATTAACATCGAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E377113" ref_strand="+" ref_description="SGN-E377113 [TUS-21-A13]">
      <seq>gactttggacgctcccagctggctatatggagattggtgaatctgctgctgagggagcaattagggaaacctgggaagaggcaaatgcagaagtagaggttcaatcactttttgctcaattggacatccctcttataggacaaacgtacatgatttttttggcaaaactgaaaaatccccacttttcacctggtccagaatcatcagaatgtcagctttttgaacttgatgatattccttttgattctttagcattttcatcaatgctagtaagcttgaatctgtacatagaagatattaaagttggaagaccgaagttccattatggcgtcattaacaagaggcctggaacaagcccttctgatatccatgcttacactctggattttcatatgcaatcctgagaagcagatacaatattttcaagcactagaatgcggttggtatgttcgtcaagactgaaacagctccggtgttttcatcaaagctttagttgtgtacttgtggtgatagttccattctttctaatcacttatctagtagtaaaaagtcttcctgatttgagttgttcaaaattgacttatgatgtgtgcagactgaacttataagatgggacacatccacattcaattcattatcagattaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C03HBa0013A17.1" temp_strand="-" temp_description="C03HBa0013A17.1  AC238559.1 htgs_phase:2 submitted_to_sgn_as:gi|261249975|gb|AC238559.1| upload_account_name:jianfeng-ren Solanum lycopersicum chromosome 3 clone C03HBa0013a17, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces">
        <position start="83366" stop="79310"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83232" g_stop="83226" g_length="7"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="7" r_length="7" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="83225" i_stop="83064" i_length="162">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="83063" g_stop="82928" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="8" r_stop="143" r_length="136" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="82927" i_stop="82842" i_length="86">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="82841" g_stop="82701" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="144" r_stop="284" r_length="141" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="82700" i_stop="82580" i_length="121">
            <donor d_prob="0.797" d_score="1.00"/>
            <acceptor a_prob="0.905" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="82579" g_stop="82521" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="285" r_stop="343" r_length="59" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="82520" i_stop="79915" i_length="2606">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="79914" g_stop="79611" g_length="304"/>
          <reference_exon_boundary r_type="cDNA" r_start="344" r_stop="647" r_length="304" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="648" polyA_stop="666"/>
      <MATCH_line gen_id="C03HBa0013A17.1" gen_strand="-" ref_id="SGN-E377113" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>647</cumulative_length_of_scored_exons>
        <coverage percentage="0.971" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C03HBa0013A17.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E377113" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83232" e_stop="83226"/>
          <exon e_start="83063" e_stop="82928"/>
          <exon e_start="82841" e_stop="82701"/>
          <exon e_start="82579" e_stop="82521"/>
          <exon e_start="79914" e_stop="79611"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACTTTGGTATGTGTCTACCAACAGAGTTTAGTGAGAAGGGAGGACTTCCTTCCACAACCTCTAAGAAAGTTCTCTATTAGTACCCAGAATTCAGAAATGTAGAGAGTACTGAAGTAATTCGAATTCCAGTATAGTAAAGTTTATCTTCAAATAATGTTGTACTGGTAGGACGCTCCCAGCTGGCTATATGGAGATTGGTGAATCTGCTGCTGAGGGAGCAATTAGGGAAACCTGGGAAGAGGCAAATGCAGAAGTAGAGGTTCAATCACTTTTTGCTCAATTGGACATCCCTCTTATAGGACAAGTTAGTATAAATTCTTGAAGATGGCATTTACCTCCTATGAATTATGACCGATATTGGTGATAATTATTTTTTCCTCATCTTTGCAGACGTACATGATTTTTTTGGCAAAACTGAAAAATCCCCACTTTTCACCTGGTCCAGAATCATCAGAATGTCAGCTTTTTGAACTTGATGATATTCCTTTTGATTCTTTAGCATTTTCATCAATGCTAGTAAGCTTGAATCTGGTAATTTTTTATGCTACATGGTTAAATATTAACTTTACAGAAAATATATATATGTGTGTGTTCATTTGCTTGCTCGCGCTAAAGTTAAATTATATCTCTCTCTTATTTCATCTCATTGTAGTACATAGAAGATATTAAAGTTGGAAGACCGAAGTTCCATTATGGCGTCATTAACAAGAGGTATGTTGGTCACCCTATGTTATAGTGTTCACTTAGTTCTAAGATCCTCAACAAAGCTTTAGTGATTTGTTGTTATGTAGCTAAAACTCTTTAAAATCATTGTCACACCTGTATTGATACAACATGGATGTGAGTGTAGGTGTGGGATAGATAGGATTTGGTCAACTTACCTTGGGTACTTTGACTACATCTATGGGCGAGAAGTATAGATTAATTGGGTATTTAGTTTGATTTTTGGGTTTATATAGTATGACTATGAGCATGTTTTACTATTATATCTTATCTTATGAATAAATATTACTCCTACTATCCAAATTTATGTGGAATGCTTTCCTTTTTAGTCTGTCCAAAAAGGAATGTGACCTTTCTATAATTAGAAATAACTTGACTTTAAATTTTTCCTTTTACCCTTGATGAAATGATTTATAGCCACACAAATACCTCAGGTTTGTTTTAGACCACATATTTCAAGTCTTTTCTTTTTTTCTTGAACTTTGTATTTCTGCACCCGAGTCCAAGCAACTTAGGTCTATTGTTCAAAGCATGCTAGGTAGTCCTATTTGAATATGTATGACAATTTAACAGAGAGCACTTCCGATATGAATATTATTTGTAGCTCAACTAATAAGATGAAATGTCATTTGTTTGATGAAGTAACTGATAGGAGAAATCCCAAACTATAAATGTTCTTTTATTCCCTGTTCTGCAAAGGTGCTGTATTTCTTTCTCATATTAGGTCACTAGAGTGTTGGCTAAAAACTGTCTCTATATTTCTCATTTTGCTGGAGAGGCTCCACTATCAGTCTTCTCGATATTAGCAAGCTATGGATTGTATCATCTTGTCTTTAAATATCATTTGACTGGAAAAGAGAGAAGATCCTCTCATAGTAACTTGATTAACGTCAGTACTATGGGTATGCCTTACAATGGTGGTGGTTATGCATTTTTACGCTCTCCATTCAAATTTATTTCTCAATTCTTTGGCCTTAAAATTAATTTCTCACTTCGTTGCGCTTCAAATTAAGTTCTCCCACTGTTGTCAAAGGCACACTTAAAGCACGCTTAAGCCCTAAAGTGAGGCTCAAAACACGGTGAGCGCTTCGCCTCGCCTTATATGTGCTTCAGTGTCGTCATCAAGGTTCTAAGGCATATTTATCCTTGCCAATGAGCCTTTGTTGAAGAGGCACACTAAACAATTGATATTTAACGTTATCATAATTTCTTTGTTTATATAATTGTCATTCATGTTTATAATTATTAGTTTTGGACAAAACATATATATATTTGTAATTTCCTCTTTGCGCCTTTTTTCATGAATGCCCATGCTTTATTTGCGCTTTTCACTTAAAGCCCCAATGGACCTTAGAGCTTTTTTGGGCTTTTTGCCTTTGATAACACTGAGTTCTCTGAAATTGCAATTTACTTTGCAAGACCAGCCCCAACTCTATGGAGCCGCATTGGCCCCTCTTACTATCCTAATCTTTGGTGAAGCGTAAATTAGTGTATAGAGTAGTTAGCTGTCTCTACAGTGGCAAGTTCATGTTTTTATTTCCTTTTAGCTCCTTCGATTGGGATGACTTAAGCTGGTAGGGTACCCATTTGTTTCTTCTAACATTTATTAGAACTCTGGATGTGATGAGCACCCAAGACTGCAACCCAGCTGTCAATGAGGTGGGAGAAAACCTTGGTGACCAGGGATCAAATCCCAACAAAGACAAACAAGGCTAGTTCATTTCCCCTTGTCTTTCTAACCTTTGTCGACAGAGTTACTCTATACCTATGCTGGTGAGAGGACAGGTACTGGCGGAATAATTGAGGTGCACACAAGTTGGCTCCGATACAATTATTATCTCCCCCCTACCCCCCCCCCCCCCCCAAAAAAAAAAGGATTGGATTAACATGCATGCGCAGGCTGAATCAAACACCACTGTTATCCAAAAAAATAAGCAGATTGGATTGACATGCATTTCGTCGTATATAACCCTATCTCTCAGTGGAATAATATGGCTGCAGATGTAAGGTAACACGTTTTGACCTGGGAGTAAATGTCTCATACAATTTGACTTTTAAGTTGAGATACATGTTATTACTCCCCCATTATTCAGTTCTTCTTAGATACTCCTTCTGTCCAACAATACTTGTCCACTATTGACTTTTTACACTTTCTTAAAAAACTATAAATGGAAAAGGTAAATTTACTATATCATCCTTTACATATTATAAATACAAATGTCTTGAAAAAAAGTAACATTGAAATGACTTAATTAATGATAAAGGTGAATTAGGAACTAAGTATAAAATTATCCATTGATTTCATCAAGTGGACAAGTATTGTTGAACATCCAAATAGTATAGTGGACAACTATTGTTGGACGGATGGAGTATTAGCTTATTTTTCCACTTCCGATGCTTGATTTCAAGGGCTGAGCATTTGCTGAAAACTAGGATGTTGAAGAGTTGAAGACTAAAATAGTTAGACCTGGGAATATGTATGTTGTTTGAAAGTTGAAACTGCACTACACTATGGCTCTTGGCTTTTTTTTCTGCCAAGAGCTTTTCTTTGAACTGTATTTCCTTATTCCTTTCCATTGCTTATGTGTTTCCAGGCCTGGAACAAGCCCTTCTGATATCCATGCTTACACTCTGGATTTTCATATGCAATCCTGAGAAGCAGATACAATATTTTCAAGCACTAGAATGCGGTTGGTATGTTCGTCAAGACTGAAACAGCTCCGGTGTTTTCATCAAAGCTTTAGTTGTGTACTTGTGGTGATAGTTCCATTCTTTCTAATCACTTATCTAGTAGTAAAAAGTCTTCCTGATTTGAGTTGTTCAAAATTGACTTATGATGTGTGCAGACTGAACTTATAAGATGGGACACATCCACATTCAATTCATTATCAGATTAAC</genome_strand>
        <mrna_strand>GACTTTG..................................................................................................................................................................GACGCTCCCAGCTGGCTATATGGAGATTGGTGAATCTGCTGCTGAGGGAGCAATTAGGGAAACCTGGGAAGAGGCAAATGCAGAAGTAGAGGTTCAATCACTTTTTGCTCAATTGGACATCCCTCTTATAGGACAA......................................................................................ACGTACATGATTTTTTTGGCAAAACTGAAAAATCCCCACTTTTCACCTGGTCCAGAATCATCAGAATGTCAGCTTTTTGAACTTGATGATATTCCTTTTGATTCTTTAGCATTTTCATCAATGCTAGTAAGCTTGAATCTG.........................................................................................................................TACATAGAAGATATTAAAGTTGGAAGACCGAAGTTCCATTATGGCGTCATTAACAAGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTGGAACAAGCCCTTCTGATATCCATGCTTACACTCTGGATTTTCATATGCAATCCTGAGAAGCAGATACAATATTTTCAAGCACTAGAATGCGGTTGGTATGTTCGTCAAGACTGAAACAGCTCCGGTGTTTTCATCAAAGCTTTAGTTGTGTACTTGTGGTGATAGTTCCATTCTTTCTAATCACTTATCTAGTAGTAAAAAGTCTTCCTGATTTGAGTTGTTCAAAATTGACTTATGATGTGTGCAGACTGAACTTATAAGATGGGACACATCCACATTCAATTCATTATCAGATTAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E377112" ref_strand="+" ref_description="SGN-E377112 [TUS-21-A13](-)">
      <seq>gggactttggacgctcccagctggctatatgaagattggtgaatttgctgctgagggagcaattagggaaacctgggaaaaggcaaaatgcaaaagtaaaggttcaatcactttttgctcaattggacatccctcttataggacaaacggacatgatttttttggcaaaaatgaaaaatccccccttttcacctggtccaaaatcatcaaaatgtcagctttttgaacttgatgatattccttttgattttttagcattttcatcaatgctagtaagcttgaatctgtacataaaaaatattaaagttggaagaccgaagttccattatggggtcattaacaaaaggcctggaacaagcccttttgatatccatgcttaccctttggattttcatatgcaatcctgaaaagcaaatacaatattttcaagcactaaaatgcggttggtatgttcgtcaagactgaaacagctccggggttttcatcaaagctttagttggggacttgtggtgatagttccattctttttaatcacttatttagtagtaaaaagttttcctgatttgagttgttcaaaattgacttatgatgggggcagactgaacttataagatgggacccatcccccttcaattccttatcagattttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C03HBa0013A17.1" temp_strand="-" temp_description="C03HBa0013A17.1  AC238559.1 htgs_phase:2 submitted_to_sgn_as:gi|261249975|gb|AC238559.1| upload_account_name:jianfeng-ren Solanum lycopersicum chromosome 3 clone C03HBa0013a17, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces">
        <position start="83366" stop="79314"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83234" g_stop="83226" g_length="9"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="9" r_length="9" r_score="0.889"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="83225" i_stop="83064" i_length="162">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.994" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="83063" g_stop="82928" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="10" r_stop="146" r_length="137" r_score="0.949"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="82927" i_stop="82842" i_length="86">
            <donor d_prob="0.900" d_score="0.98"/>
            <acceptor a_prob="0.995" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="82841" g_stop="82701" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="147" r_stop="287" r_length="141" r_score="0.957"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="82700" i_stop="82580" i_length="121">
            <donor d_prob="0.797" d_score="0.98"/>
            <acceptor a_prob="0.905" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="82579" g_stop="82521" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="288" r_stop="346" r_length="59" r_score="0.932"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="82520" i_stop="79915" i_length="2606">
            <donor d_prob="0.973" d_score="0.94"/>
            <acceptor a_prob="0.997" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="79914" g_stop="79617" g_length="298"/>
          <reference_exon_boundary r_type="cDNA" r_start="347" r_stop="644" r_length="298" r_score="0.940"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="650" polyA_stop="688"/>
      <MATCH_line gen_id="C03HBa0013A17.1" gen_strand="-" ref_id="SGN-E377112" ref_strand="+">
        <total_alignment_score>0.945</total_alignment_score>
        <cumulative_length_of_scored_exons>643</cumulative_length_of_scored_exons>
        <coverage percentage="0.935" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C03HBa0013A17.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E377112" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83234" e_stop="83226"/>
          <exon e_start="83063" e_stop="82928"/>
          <exon e_start="82841" e_stop="82701"/>
          <exon e_start="82579" e_stop="82521"/>
          <exon e_start="79914" e_stop="79617"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGACTTTGGTATGTGTCTACCAACAGAGTTTAGTGAGAAGGGAGGACTTCCTTCCACAACCTCTAAGAAAGTTCTCTATTAGTACCCAGAATTCAGAAATGTAGAGAGTACTGAAGTAATTCGAATTCCAGTATAGTAAAGTTTATCTTCAAATAATGTTGTACTGGTAGGACGCTCCCAGCTGGCTATATGGAGATTGGTGAATCTGCTGCTGAGGGAGCAATTAGGGAAACCTGGGAAGAGGCAAA-TGCAGAAGTAGAGGTTCAATCACTTTTTGCTCAATTGGACATCCCTCTTATAGGACAAGTTAGTATAAATTCTTGAAGATGGCATTTACCTCCTATGAATTATGACCGATATTGGTGATAATTATTTTTTCCTCATCTTTGCAGACGTACATGATTTTTTTGGCAAAACTGAAAAATCCCCACTTTTCACCTGGTCCAGAATCATCAGAATGTCAGCTTTTTGAACTTGATGATATTCCTTTTGATTCTTTAGCATTTTCATCAATGCTAGTAAGCTTGAATCTGGTAATTTTTTATGCTACATGGTTAAATATTAACTTTACAGAAAATATATATATGTGTGTGTTCATTTGCTTGCTCGCGCTAAAGTTAAATTATATCTCTCTCTTATTTCATCTCATTGTAGTACATAGAAGATATTAAAGTTGGAAGACCGAAGTTCCATTATGGCGTCATTAACAAGAGGTATGTTGGTCACCCTATGTTATAGTGTTCACTTAGTTCTAAGATCCTCAACAAAGCTTTAGTGATTTGTTGTTATGTAGCTAAAACTCTTTAAAATCATTGTCACACCTGTATTGATACAACATGGATGTGAGTGTAGGTGTGGGATAGATAGGATTTGGTCAACTTACCTTGGGTACTTTGACTACATCTATGGGCGAGAAGTATAGATTAATTGGGTATTTAGTTTGATTTTTGGGTTTATATAGTATGACTATGAGCATGTTTTACTATTATATCTTATCTTATGAATAAATATTACTCCTACTATCCAAATTTATGTGGAATGCTTTCCTTTTTAGTCTGTCCAAAAAGGAATGTGACCTTTCTATAATTAGAAATAACTTGACTTTAAATTTTTCCTTTTACCCTTGATGAAATGATTTATAGCCACACAAATACCTCAGGTTTGTTTTAGACCACATATTTCAAGTCTTTTCTTTTTTTCTTGAACTTTGTATTTCTGCACCCGAGTCCAAGCAACTTAGGTCTATTGTTCAAAGCATGCTAGGTAGTCCTATTTGAATATGTATGACAATTTAACAGAGAGCACTTCCGATATGAATATTATTTGTAGCTCAACTAATAAGATGAAATGTCATTTGTTTGATGAAGTAACTGATAGGAGAAATCCCAAACTATAAATGTTCTTTTATTCCCTGTTCTGCAAAGGTGCTGTATTTCTTTCTCATATTAGGTCACTAGAGTGTTGGCTAAAAACTGTCTCTATATTTCTCATTTTGCTGGAGAGGCTCCACTATCAGTCTTCTCGATATTAGCAAGCTATGGATTGTATCATCTTGTCTTTAAATATCATTTGACTGGAAAAGAGAGAAGATCCTCTCATAGTAACTTGATTAACGTCAGTACTATGGGTATGCCTTACAATGGTGGTGGTTATGCATTTTTACGCTCTCCATTCAAATTTATTTCTCAATTCTTTGGCCTTAAAATTAATTTCTCACTTCGTTGCGCTTCAAATTAAGTTCTCCCACTGTTGTCAAAGGCACACTTAAAGCACGCTTAAGCCCTAAAGTGAGGCTCAAAACACGGTGAGCGCTTCGCCTCGCCTTATATGTGCTTCAGTGTCGTCATCAAGGTTCTAAGGCATATTTATCCTTGCCAATGAGCCTTTGTTGAAGAGGCACACTAAACAATTGATATTTAACGTTATCATAATTTCTTTGTTTATATAATTGTCATTCATGTTTATAATTATTAGTTTTGGACAAAACATATATATATTTGTAATTTCCTCTTTGCGCCTTTTTTCATGAATGCCCATGCTTTATTTGCGCTTTTCACTTAAAGCCCCAATGGACCTTAGAGCTTTTTTGGGCTTTTTGCCTTTGATAACACTGAGTTCTCTGAAATTGCAATTTACTTTGCAAGACCAGCCCCAACTCTATGGAGCCGCATTGGCCCCTCTTACTATCCTAATCTTTGGTGAAGCGTAAATTAGTGTATAGAGTAGTTAGCTGTCTCTACAGTGGCAAGTTCATGTTTTTATTTCCTTTTAGCTCCTTCGATTGGGATGACTTAAGCTGGTAGGGTACCCATTTGTTTCTTCTAACATTTATTAGAACTCTGGATGTGATGAGCACCCAAGACTGCAACCCAGCTGTCAATGAGGTGGGAGAAAACCTTGGTGACCAGGGATCAAATCCCAACAAAGACAAACAAGGCTAGTTCATTTCCCCTTGTCTTTCTAACCTTTGTCGACAGAGTTACTCTATACCTATGCTGGTGAGAGGACAGGTACTGGCGGAATAATTGAGGTGCACACAAGTTGGCTCCGATACAATTATTATCTCCCCCCTACCCCCCCCCCCCCCCCAAAAAAAAAAGGATTGGATTAACATGCATGCGCAGGCTGAATCAAACACCACTGTTATCCAAAAAAATAAGCAGATTGGATTGACATGCATTTCGTCGTATATAACCCTATCTCTCAGTGGAATAATATGGCTGCAGATGTAAGGTAACACGTTTTGACCTGGGAGTAAATGTCTCATACAATTTGACTTTTAAGTTGAGATACATGTTATTACTCCCCCATTATTCAGTTCTTCTTAGATACTCCTTCTGTCCAACAATACTTGTCCACTATTGACTTTTTACACTTTCTTAAAAAACTATAAATGGAAAAGGTAAATTTACTATATCATCCTTTACATATTATAAATACAAATGTCTTGAAAAAAAGTAACATTGAAATGACTTAATTAATGATAAAGGTGAATTAGGAACTAAGTATAAAATTATCCATTGATTTCATCAAGTGGACAAGTATTGTTGAACATCCAAATAGTATAGTGGACAACTATTGTTGGACGGATGGAGTATTAGCTTATTTTTCCACTTCCGATGCTTGATTTCAAGGGCTGAGCATTTGCTGAAAACTAGGATGTTGAAGAGTTGAAGACTAAAATAGTTAGACCTGGGAATATGTATGTTGTTTGAAAGTTGAAACTGCACTACACTATGGCTCTTGGCTTTTTTTTCTGCCAAGAGCTTTTCTTTGAACTGTATTTCCTTATTCCTTTCCATTGCTTATGTGTTTCCAGGCCTGGAACAAGCCCTTCTGATATCCATGCTTACACTCTGGATTTTCATATGCAATCCTGAGAAGCAGATACAATATTTTCAAGCACTAGAATGCGGTTGGTATGTTCGTCAAGACTGAAACAGCTCCGGTGTTTTCATCAAAGCTTTAGTTGTGTACTTGTGGTGATAGTTCCATTCTTTCTAATCACTTATCTAGTAGTAAAAAGTCTTCCTGATTTGAGTTGTTCAAAATTGACTTATGATGTGTGCAGACTGAACTTATAAGATGGGACACATCCACATTCAATTCATTATCAG</genome_strand>
        <mrna_strand>GGGACTTTG..................................................................................................................................................................GACGCTCCCAGCTGGCTATATGAAGATTGGTGAATTTGCTGCTGAGGGAGCAATTAGGGAAACCTGGGAAAAGGCAAAATGCAAAAGTAAAGGTTCAATCACTTTTTGCTCAATTGGACATCCCTCTTATAGGACAA......................................................................................ACGGACATGATTTTTTTGGCAAAAATGAAAAATCCCCCCTTTTCACCTGGTCCAAAATCATCAAAATGTCAGCTTTTTGAACTTGATGATATTCCTTTTGATTTTTTAGCATTTTCATCAATGCTAGTAAGCTTGAATCTG.........................................................................................................................TACATAAAAAATATTAAAGTTGGAAGACCGAAGTTCCATTATGGGGTCATTAACAAAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTGGAACAAGCCCTTTTGATATCCATGCTTACCCTTTGGATTTTCATATGCAATCCTGAAAAGCAAATACAATATTTTCAAGCACTAAAATGCGGTTGGTATGTTCGTCAAGACTGAAACAGCTCCGGGGTTTTCATCAAAGCTTTAGTTGGGGACTTGTGGTGATAGTTCCATTCTTTTTAATCACTTATTTAGTAGTAAAAAGTTTTCCTGATTTGAGTTGTTCAAAATTGACTTATGATGGGGGCAGACTGAACTTATAAGATGGGACCCATCCCCCTTCAATTCCTTATCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E746060" ref_strand="+" ref_description="SGN-E746060 [GI|47105342]">
      <seq>ggatatggtgaagggggatgttcatcagtcaaaatccagcggcaaatctcaattgacctaccaagagtttcacatttttgctatgtggggagctgttacccagaaaaaataatgctcaaagctatacagattgtgggttcatcttctgggtttgcttcctatagatttagaaagcctcaacccaattctgccttctccttaatttcgagaaaacccattctcacaacatctgaaactttgttattgccggcttctcaactacatagtcacaagtcctgttttagagattttcgaatgtcttcaactcattcaaagtcatcctcttcctcatctgttgcagtccagtcaactggaaacattcgcaagatcaacttctgccagttttgcgggggcccaaataagcatgagatacctgatggtgaagaaaaggtgagagctatctgcactcattgtgggaagattacatatgagaatccaaaaatggttgttggttgccttattgagcatgataagaagatattaatgtgcaggcgcaaaattcacccatcatatggactttggacgctcccagctggctatatggagattggtgaatctgctgctgagggagcaattagggaaacctgggaagaggcaaatgcagaagtagaggttcaatcactttttgctcaattggacatccctcttataggacaaacgtacatgatttttttggcaaaactgaaaaatccccacttttcacctggtccagaatcatcagaatgtcagctttttgaacttgatgatattccttttgattctttagcattttcatcaatgctagtaagcttgaatctgtacatagaagatattaaagttggaagaccgaagttccattatggcgtcattaacaagaggcctggaacaagcccttctgatatccatgcttacactctggattttcatatgcaatcctgagaagcagatacaatattttcaagcactagaatgcggttggtatgttcgtcaagactgaaacagctctggtgttttcatcaaagctttagttgtgtacttgtggtgatagttccattctttctaatcacttatctagtagtaaaaagtcttcctgatttgagttgttcaaaattgacttatgatgtgtgcagactgaacttataagaataaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C03HBa0013A17.1" temp_strand="-" temp_description="C03HBa0013A17.1  AC238559.1 htgs_phase:2 submitted_to_sgn_as:gi|261249975|gb|AC238559.1| upload_account_name:jianfeng-ren Solanum lycopersicum chromosome 3 clone C03HBa0013a17, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces">
        <position start="91693" stop="79348"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91393" g_stop="91043" g_length="351"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="351" r_length="351" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91042" i_stop="86055" i_length="4988">
            <donor d_prob="0.902" d_score="0.98"/>
            <acceptor a_prob="0.900" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="86054" g_stop="85923" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="352" r_stop="483" r_length="132" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="85922" i_stop="83303" i_length="2620">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.954" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="83302" g_stop="83226" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="484" r_stop="560" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="83225" i_stop="83064" i_length="162">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="83063" g_stop="82928" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="561" r_stop="696" r_length="136" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="82927" i_stop="82842" i_length="86">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="82841" g_stop="82701" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="697" r_stop="837" r_length="141" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="82700" i_stop="82580" i_length="121">
            <donor d_prob="0.797" d_score="1.00"/>
            <acceptor a_prob="0.905" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="82579" g_stop="82521" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="838" r_stop="896" r_length="59" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="82520" i_stop="79915" i_length="2606">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="79914" g_stop="79649" g_length="266"/>
          <reference_exon_boundary r_type="cDNA" r_start="897" r_stop="1162" r_length="266" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1163" polyA_stop="1182"/>
      <MATCH_line gen_id="C03HBa0013A17.1" gen_strand="-" ref_id="SGN-E746060" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>1162</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C03HBa0013A17.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E746060" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91393" e_stop="91043"/>
          <exon e_start="86054" e_stop="85923"/>
          <exon e_start="83302" e_stop="83226"/>
          <exon e_start="83063" e_stop="82928"/>
          <exon e_start="82841" e_stop="82701"/>
          <exon e_start="82579" e_stop="82521"/>
          <exon e_start="79914" e_stop="79649"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGATATGGTGAAGGGGGATGTTCATCAGTCAAAATCCAGCGGCAAATCACAATTGACCTACCAAGAGTTTCACATTTTTGCTATGTGGGGAGCTGTTACCCAGAAAAAATAATGCTCAAAGCTATACAGATTGTGGGTTCATCTTCTGGGTTTGCTTCCTATAGATTTAGAAAGCCTCAACCCAATTCTGCCTTCTCCTTAATTTCGAGAAAACCCATTCTCACAACATCTGAAACTTTGTTATTGCCGGCTTCTCAACTACATAGTCACAAGTCCTGTTTTAGAGATTTTCGAATGTCTTCAACTCATTCAAAGTCATCCTCTTCTTCATCTGTTGCAGTCCAGTCAACTGTGAGTTGTTGTTGTTACACCTGTGCATTTCTTTTGATTTACTGAAATTGATGTCTCTAAAGTGTTTGATTTTGTAATTTCTGGTGCCATTTTGCTGGACTGATTGTTGAGGAGGTTGCATATTGGAATGGAATTTGATTACTTGAACTAAAACTATTTGTTTGGGTAGGTATGAATCAATCACAAATAACATAAGTGAAATAGAGGGTGAAGTAGATAGTTTAGTTGATTTCATAGGACAATTTCAGAGCCACCTATCTAGACTTTGATCTTGATGATGCCCTCTGGGGTTGTAAAACCCACCCATCAGCTTTTACTTGATGTTTTTTTTTTTTTTGGTGTGAATACATAGTTACCATTATCAAAAAAGAAATAATCCTATATTCAATCATGAATCATCTATGCTCCAGTCCAGTGCCTTAATTTTAGGTTAGAAATTCTTGGCTTATCTAGAGTGCCAGATGTTATATTTAACATTTTTGGATTTCACGAATACCCTTTCACAGATATATGTTGGAATTTGAATGGATTGTGCACCTCTTTTGATGGTTGTTGATTTACTGAAAGAGATGACTGAAGGTGCTGGATTGTGCCATTTCTAGTTCCATTTTCTTTGTCTGTTGTTGGTTGTTCATTCTTTTTGTCTGAGCCCTGAGGTTATGTCTTGGCACATCGAATGAGATTCAAAGTGGTGTTTGACAAAGATAAGCACAGGTTTAACGCTATTTTGGACACTTTTGTTAAATAAACACAAGGTTGATTGAACTAGAATGTTTTCTATTTGACCCTTCAAGGTGGCCCAATGGTTTGCGCTTGGGACTTCCATGTTGGAGGCCTCAAGTTCGGAACCCCTTGCCAGCAAAAGCAAGGGGTTTGCCTTCTGGGTCGAGCTCCTGGTGCGGGTTACCTTTCCTATATGGTTTGCGAGCTATTGCATAGGAGCGGGGGTTTTACCCTGTGCGCACCCAAAGTGTAGCGACTGCGGGTTTCCCTTGCCATAAAAAAAAAGAATGTTTTATTTGTTTTTGTGTTAAGCATTTAGCTATTTTACCTCTTACGCAACAATTTTTGTATAAAATGAAGCCTCTGCGTTTAAAGCCTAACTAAATTATCTTTACTCATCGGGCTTTTGATGCATGCCGATAAACCATATTTGATGACCCATTTTTATTCTCTTTCTATCATTTTCTGCAAATAAATTTTGCATATATTCTGTTCATTGAAACTGCTAAATGAAAGTACGGACTAAGAAGATCAGGTATTGAATTAAAAGATGCTTTCTCTCTCTCTCCTTTGTCCTTCGCTATATTCTTGTTGACCTCATTTCCAATGCAACCTTGTTTCCATCTTATTTTCTAGCTAGCTCAATCTTGTTTACTTTATATTCTCCACATCTTGCTTAATAATCAAGTGCCTACTTTGATTTGTTGCTCAAACATTACCAAATGTAGGTGTTAACACCCTTTTAGTCTGCCAATGGTCTACACATGGAATATTTAAGGAAATTTGGAAGTAGAATTCATCAGCTTATAAGTTATTTATTTTTATTTCTGTCCAGCAGTGTTTTTAGTAGATTATTACAGCTTTTTAGTTATTTATTATCCCTATTTCTAAGTAGCAGTTGTTGCAGTAAGGAGGTTATTACTCCACTTTCTCATTTAGTTGTAGTAGGCAGTTTTAGTAGACAGCAGACAATTATTTTCCCTGTTTCAGTGTTGTATTTAATGTATTTGAATTCAGTGAAATAATAAGCAGAAAATAAGTCAAGTTTTTGAGTACTTCAAACTCAAGAGATCGCAGGTTCTCTCTTAACGAACCAGCACCATAAGTCGTAGGAAGAGAACTTCAGATTTCATATTCCAGCGTCCCATAACGAGATCCATAACAGGGACCATAACAGTAGGCCTGATATCAAATCTTCAATTTAAAGCTGCTTTATCTTCTGCTACGTTTGAGCAAAACTAACATCATAAGTCCAAAGCCATATATTCTGCTGTAAAATGCCTTTGTTGGAAGTAGTAAACATCACCTTTCCACCCATGTATTAATTTTTTCTGATGATACACCTCTGGCTTGCCCGAATCCCCCCTCCCCCCCCCCCCCTTCCCTTGTGCCATTGCTTCCACACATGACTCTTCATTTCTTGGATCCCTTTACTGGCGGAGTCATTTCCATGCACTTCTCTTCCTTATTCACTTCTTTTGCCTCATGCTATCTATCTTTATGAATAACATCGTTGCTTCCTCTTTGCACCCTTTGATATCTATCGAACTCTTCGGCGAATAAGATGATGTTCTGATGTATCCATATAGGGACATCAAAGTTTGGATCTTCTCTTCCCCCCCGGGGTATGTTGGCTCAAAGGTATTGCATCTCGAATGTTGTCAAGCTGGAATTGTTTTCTTCACTTTTCAGCATAGCGGATTCTTGCATACCACTATCTTCCCAAGGTTGAGGGATTTCAGAAATTTCTGGATTCTTTACTATCGCTTCCTCTTCTTCACTCTTTTCATGAGTTGGAAAGATTGGCTTCAAGTTCGACAGATATTGGGTCAATTAAATTAGAGGAAGAGTCATTCACTAGCCCATTTGAGATGAACTGCACCAGCAGATCTGGGCCCAAACTTTTCCTTCTAATCATAGGCCTCTTTCTCTTGATTGGGGTGGAAAGTGGGACCTCAGTCACGTGTGCCTTGTCACTTGCTGGCACATTGACCAGTTCATCACTTCAGGGTGGTCGGAGGAACCCATGTGCCCTGCCACCTTTGTAAAGCCTAAAAGGCTTTCATGTTCTAATCCACCAGTTCCTTCGTCAAACCTCTTGATCTTTGGATGTTCTTTGCTGCGTGCACCGTAAACCACCCTCGCCGGCGTCGCAACCCAGATTCGGACTTTCAAGGTTAAATGTTAGTGGACCAGCTCCACCGAGTTCGGAACAGAGACTCTGTCTCCTCTGACCTTCATCCTTGCCCATTTGAGGTGATTTCATAACTCAGTTTCTTCTTCAGTTCTAATCCAGCCTCCACATAAGTTTCCTACCTCACGGAAAATTTTTTGGGACCAAAGTTGGAGGAGCAAACCTACTACTCTGATACAGACCTGGTTCGGCCTATCATGGATGGAAGTCAATGTCAGCAACCACCACTGTAGGTTGAACTTGTAGGATTTCCACCACTTCCCTCTTACAATGTGGTCTGCAGCTGGTTTGTTGGGAAACTCAAAGAGGAAACGATTGTGCCCCAAATCGTAGATGTTGATTCCATGCTTGTGCTTCCAAGTGCTTGCCACCCACCGTCAAATCTCTGATAGAAAGGCATCTGGAAATTGGAATCTCCTCTGGGGGACATCCAACCACACCTTTTGCTAGTAGTTCATTTTGATTTGTTGTTGTCGAATCTGTAATAAAGATCAATTTCCTTTTTTTGTTGAATCTTGTAGCATTTATTCTATTGTACACCATTTATTGTTTCTGACATGTGAATAGAAGAGACCCTCTTCTGTTTTCCTGTGCAACATCTTAACTGCCTTCTGGGCCTTAGCGTTTATGAAATTCATTATTTTGGTAGCTATGCCTATCCATCCTGGGTTTAGTGACTACTCGGGGATGATGATGACAACTCTTCTCTTACCCTGCATATTTGAAATGCTAACTTATTGACCATATTTGTTATAATTCCTTGAGCAGAAGAACTCTGTGAACTGGTCCCGAAACTTCCATCTATGGACTGAATTTCCGTATGCTTCTTTAAGAGCAAATGCTAGCCGCTCATCGTCTTGTAGATAGTACTATCGTGTTCATCATGTTACAACCTCGTTCTGCCCAGTCTTACCATGTTTCAGCCCTAGAAACTACTTTGGTAATATCGTAAGATTTGAATCCTACAGCAAAATAAATGGTATAGTCCTCCATGGTTGTAACAAAGAAAAAAAGGTTGGAGAGGACTTGGGTTGAGGGAGGTTCTAGCAATGGAAGATTGCCGGAAAAGGGATTCTAGGGGCCCAGAAGAGAGCTGCAAAAGTTTCCTCGGGTAATGTGCCTGGTAGCATTTTGACTGGAAGTGATTTAATCTCTTTAATGATCCCTTTTATTATCAATTTTCCATAAGAAAAATATTATAAAGCAACAAGCATACATTTCCCAAAAAAGTCCTGCAAAAACTTTGATGTGAATATACCATCTGATGAAAAATACCTAATCACATCCTAACATCAACCTAGCGGTCAAAACATGCGCACTTGTCCAAAATGGAAGGCAATATGCAATCAGAAATAAATGGAAGTGGCTTCTTATTGCACATAGCATTCTTCTAAATGCTGGCATGCCTATGATTCTAGGTATCTGATATAGAATTGGCTGTACAAGTTGAAAACAACCAAAATCTGTTACGAACTGAGGCATTCAACTGGAGTTTCTCTCTCCTCTTCTCTCCAGCCTTATCTTTCGTTTCTCTTCCTACAAAGAGTTTTTTCATGCCAGTTGTGAAGAATAATGAACCTTGAGCTTGTCAACCCAAAGGTTAGCTTATATGTGAGGATTTCCCAACATCATATAAGGACATGAGAGCTCATTTCTTCAATCAACACAAACACTCTTAACACCCCACCCTGCACATCCAAGGGCTGGACATTTGAAGTATGACTAAATAACATGGGGGTCCAACAATATATAAACCAAGAATAGGAATGAGTCCGATGCTAATACCATTTGAAGGAAAATGAACTCTGGGCATGCTAATACCATTTGAAGAAAATGAACTTTGGGCATAACTCAACTCCAAAAGCTAGTTCATGAGGTGAGACATGCCCAACGTCATGTAAGGTTACAGCAAACCCTCTCTCCACTAATGCGAGATACTGTTACCACCAGCCAATTTTTTTAAAATTCACCTTTATGTTATTTAAATAGATCTGAGAGCATTTTGTGTTTCATAAATTGTTCAGGTTCCTTTATCTTTTCCTTGATTGATTTCAGTTCAAAGATTTTGCAGGGAAACATTCGCAAGATCAACTTCTGCCAGTTTTGCGGGGGCCCAAATAAGCATGAGATACCTGATGGTGAAGAAAAGGTGAGAGCTATCTGCACTCATTGTGGGAAGATTACATATGAGAATCCAAAAATGGTAAGATTTTCATTAAGCTTCACTGTTCCGCTTGTATTCTTGATTAAATGCAGATTAATCATTGTATTCTTTCTCAAAAAAAAAAAAAACTCATTGTATTACCTCTTGCAATCGTAATGACCACATTATTTTCCTTTGTCTTTTCAGTGCCTACATGTTTGGTGGTCAAATTTCAGTATTAATGATGTGGGAATATTCATTTTTGTTTAGAACCAGCTATAATCACCCAGCCAAATCAATTTGGTGACAGTGGTTCAATTCGATGGTTTGAATTTTGTTTATGATTTTATTTTTGGTTTCATATGGGGGACAGTTTCAAATATGTATACACCTAATCATATCGAAAGGTGTAGTACAGTGGTCATTGAGGTGAGTACAAATCTAAGAGATCAGGGTTCAAATCCCCGTTGAGACAAAAGAAGAACACTAGATTATTTCTTCTCTATCTGCCTAAGATTTGGAAGTTTGCCACATAATGTACTATGCTTCTTTTAGTAGACCTCTTTAAGGTCATGGTACATCTTCGTGGAACCAGGATGAATAGAATACCATGGGCAAGGTGCTTCACTCATAATGTTCTCTTGAAGCGCTTCATTATCGGGAACATATAATCTGTCTTGGCAGCTTAAGGTGCCATCTCCTGCGAGCTTAAATCCTGTGACTTCTACGTTGGCGGATCCTCTCTTTATACTGAAGTAACAAGGGGTCATCACACTTCTTCTCTTTCACTGTTGCCGTTAAGGATGACGTTGTAGTATACTGGACAACTACTTCACCATCTTCAGAGTCCATGAGTCGGACTCCAAAGCTTGCTAATCCTATGTGCTAAACTCCCCATATACAGTTGGGATTTGATAAATATGATAGACAATACTTTGTTTGTTTATTCATAGTCTCCCCCTACTTTTGCTCTCATGAATCTTAGATTATAATTACCTTTTGGTGTTGAGTCTTCTTGTATATATTCAAACCCTTACCTATTCAAAAAAAAAGAAGTGGTTTTTGCCTTACATACCTTGTTAGTGTATTACCATGATCAATTACTCCGTTGCAGCTTCAATCTACCAGAATGACGATAATAACACTAACATAAGCAGCAAATCAAGAAGCTCGGCCAGTCACTCAATATGACAAACATTTGACAAGTGACAAGCTCACTAAATTCTCAATTTATGACATACTTCATATCTAAGCTTTCTTGTCAAAATTAACAGCTCAACCGCTTACTACGAGACCATCTACCTTCCTCCAATCATATAACAACCAAAACAACCATCCATGCATATCAATTACTGCAAGTTAGTTTATTGAAAAGGGAAAAACTGCTTCCGATCACCACCCCGTGAGTCGAGCTTGTAAACTATACTTAAAAGGCCATTAGAATCTCTTGTATGTTGGTAGAAGAACATTCATACCTCACTTAGAAAGTTCAGCAAAGAACATACTGAACCTTCGAGAAACAACATGGGTAAGGATGATTCATGAGCTAGGATGAAGACTTTCACTTGATTCCGTGGAAAATTCACTTGGCTTGAACTTAGGTGGTGTGGAGGACAAAATCTCTTGAGAGACGGTCCAAAACGTGAAAGAACAAATGCCAAATGAAATCCTAAGCCCTAACTTATAAAACAAAAGTTTTGGCTGCCATACCCTTGGGTGCCATGTGTTCCACATGCAATTAGGGTCTGCGCAGGTCTTTAGTAAAGTATGCATAACTTCTTGTAATGAAGTCAGATTGACGAGTGGTCTGTCTCATGGGAAACTAGATCACATAACTCCTCACAGTCTAGGAGATATACTCGTTCAGAGTTGACCCTTTCGCGGCACGTAAAGGATAAACCATTCGTAGTCGCTTTTGGCTTGACTTAAACAATAAATCTTTATGAATCTGTAACCTTGTATCACCATAATAGACTGACCCTTAACTTATATACTCATTCTTGACCGTCCCGTGGTTGGACCAATTCATTGATGTTAGACTAGTCGTACTTGAACTTATAGGCACAGGGTATAACAGTTAACCCTGAGTATGTACTAGTGGGAGATAGCAGGTATCTGGACTAGTCGAGGTGCATGCAAATTCGACTCCACACCATCGTTATAAACAGATAATATACCTAATTGCACCTAGTAATCAATATAGAACGTTTGGCAAAATGCTGCAGTGCAGCACAGGTTTTTGCTTGGTCTTTGTAATTCTGAGGTTAAAGAGACTATTGAGACCCTGTTTTGTTTTATGTTGTATTTTGGAATAATGGTTTGGGAGCTTGCTAAACTTCAGGTCATTTTTTCATGGGGAAACAGTTGTGGTTATTTTACCCATTTGAGCTGCACACCTCCAGGAGGGATGCTCAAGTGTGCTCTCGAAGAGCAGCCCTCCACAGAAATCTTAGTGATTCTAGTTGTTCACTAATATGAACCTCATGGAGTATAGTTGTTCTTATTGTAAACTTTGAGGTCATAAGACCAAAATTACTCTTTTCATAGCACATGAATTAACATTGTTCTTTCTCCCATTGTTGGTATTAATATTCATTTGTGCAACACACATCAATCCCGGAACTTATTCCTGCTTCTTACTAAGGGGGTAATATTTGTAACGCTTTGTTCTCAAATTCAGGTTGTTGGTTGCCTTATTGAGCATGATAAGAAGATATTAATGTGCAGGCGCAAAATTCACCCATCATATGGACTTTGGTATGTGTCTACCAACAGAGTTTAGTGAGAAGGGAGGACTTCCTTCCACAACCTCTAAGAAAGTTCTCTATTAGTACCCAGAATTCAGAAATGTAGAGAGTACTGAAGTAATTCGAATTCCAGTATAGTAAAGTTTATCTTCAAATAATGTTGTACTGGTAGGACGCTCCCAGCTGGCTATATGGAGATTGGTGAATCTGCTGCTGAGGGAGCAATTAGGGAAACCTGGGAAGAGGCAAATGCAGAAGTAGAGGTTCAATCACTTTTTGCTCAATTGGACATCCCTCTTATAGGACAAGTTAGTATAAATTCTTGAAGATGGCATTTACCTCCTATGAATTATGACCGATATTGGTGATAATTATTTTTTCCTCATCTTTGCAGACGTACATGATTTTTTTGGCAAAACTGAAAAATCCCCACTTTTCACCTGGTCCAGAATCATCAGAATGTCAGCTTTTTGAACTTGATGATATTCCTTTTGATTCTTTAGCATTTTCATCAATGCTAGTAAGCTTGAATCTGGTAATTTTTTATGCTACATGGTTAAATATTAACTTTACAGAAAATATATATATGTGTGTGTTCATTTGCTTGCTCGCGCTAAAGTTAAATTATATCTCTCTCTTATTTCATCTCATTGTAGTACATAGAAGATATTAAAGTTGGAAGACCGAAGTTCCATTATGGCGTCATTAACAAGAGGTATGTTGGTCACCCTATGTTATAGTGTTCACTTAGTTCTAAGATCCTCAACAAAGCTTTAGTGATTTGTTGTTATGTAGCTAAAACTCTTTAAAATCATTGTCACACCTGTATTGATACAACATGGATGTGAGTGTAGGTGTGGGATAGATAGGATTTGGTCAACTTACCTTGGGTACTTTGACTACATCTATGGGCGAGAAGTATAGATTAATTGGGTATTTAGTTTGATTTTTGGGTTTATATAGTATGACTATGAGCATGTTTTACTATTATATCTTATCTTATGAATAAATATTACTCCTACTATCCAAATTTATGTGGAATGCTTTCCTTTTTAGTCTGTCCAAAAAGGAATGTGACCTTTCTATAATTAGAAATAACTTGACTTTAAATTTTTCCTTTTACCCTTGATGAAATGATTTATAGCCACACAAATACCTCAGGTTTGTTTTAGACCACATATTTCAAGTCTTTTCTTTTTTTCTTGAACTTTGTATTTCTGCACCCGAGTCCAAGCAACTTAGGTCTATTGTTCAAAGCATGCTAGGTAGTCCTATTTGAATATGTATGACAATTTAACAGAGAGCACTTCCGATATGAATATTATTTGTAGCTCAACTAATAAGATGAAATGTCATTTGTTTGATGAAGTAACTGATAGGAGAAATCCCAAACTATAAATGTTCTTTTATTCCCTGTTCTGCAAAGGTGCTGTATTTCTTTCTCATATTAGGTCACTAGAGTGTTGGCTAAAAACTGTCTCTATATTTCTCATTTTGCTGGAGAGGCTCCACTATCAGTCTTCTCGATATTAGCAAGCTATGGATTGTATCATCTTGTCTTTAAATATCATTTGACTGGAAAAGAGAGAAGATCCTCTCATAGTAACTTGATTAACGTCAGTACTATGGGTATGCCTTACAATGGTGGTGGTTATGCATTTTTACGCTCTCCATTCAAATTTATTTCTCAATTCTTTGGCCTTAAAATTAATTTCTCACTTCGTTGCGCTTCAAATTAAGTTCTCCCACTGTTGTCAAAGGCACACTTAAAGCACGCTTAAGCCCTAAAGTGAGGCTCAAAACACGGTGAGCGCTTCGCCTCGCCTTATATGTGCTTCAGTGTCGTCATCAAGGTTCTAAGGCATATTTATCCTTGCCAATGAGCCTTTGTTGAAGAGGCACACTAAACAATTGATATTTAACGTTATCATAATTTCTTTGTTTATATAATTGTCATTCATGTTTATAATTATTAGTTTTGGACAAAACATATATATATTTGTAATTTCCTCTTTGCGCCTTTTTTCATGAATGCCCATGCTTTATTTGCGCTTTTCACTTAAAGCCCCAATGGACCTTAGAGCTTTTTTGGGCTTTTTGCCTTTGATAACACTGAGTTCTCTGAAATTGCAATTTACTTTGCAAGACCAGCCCCAACTCTATGGAGCCGCATTGGCCCCTCTTACTATCCTAATCTTTGGTGAAGCGTAAATTAGTGTATAGAGTAGTTAGCTGTCTCTACAGTGGCAAGTTCATGTTTTTATTTCCTTTTAGCTCCTTCGATTGGGATGACTTAAGCTGGTAGGGTACCCATTTGTTTCTTCTAACATTTATTAGAACTCTGGATGTGATGAGCACCCAAGACTGCAACCCAGCTGTCAATGAGGTGGGAGAAAACCTTGGTGACCAGGGATCAAATCCCAACAAAGACAAACAAGGCTAGTTCATTTCCCCTTGTCTTTCTAACCTTTGTCGACAGAGTTACTCTATACCTATGCTGGTGAGAGGACAGGTACTGGCGGAATAATTGAGGTGCACACAAGTTGGCTCCGATACAATTATTATCTCCCCCCTACCCCCCCCCCCCCCCCAAAAAAAAAAGGATTGGATTAACATGCATGCGCAGGCTGAATCAAACACCACTGTTATCCAAAAAAATAAGCAGATTGGATTGACATGCATTTCGTCGTATATAACCCTATCTCTCAGTGGAATAATATGGCTGCAGATGTAAGGTAACACGTTTTGACCTGGGAGTAAATGTCTCATACAATTTGACTTTTAAGTTGAGATACATGTTATTACTCCCCCATTATTCAGTTCTTCTTAGATACTCCTTCTGTCCAACAATACTTGTCCACTATTGACTTTTTACACTTTCTTAAAAAACTATAAATGGAAAAGGTAAATTTACTATATCATCCTTTACATATTATAAATACAAATGTCTTGAAAAAAAGTAACATTGAAATGACTTAATTAATGATAAAGGTGAATTAGGAACTAAGTATAAAATTATCCATTGATTTCATCAAGTGGACAAGTATTGTTGAACATCCAAATAGTATAGTGGACAACTATTGTTGGACGGATGGAGTATTAGCTTATTTTTCCACTTCCGATGCTTGATTTCAAGGGCTGAGCATTTGCTGAAAACTAGGATGTTGAAGAGTTGAAGACTAAAATAGTTAGACCTGGGAATATGTATGTTGTTTGAAAGTTGAAACTGCACTACACTATGGCTCTTGGCTTTTTTTTCTGCCAAGAGCTTTTCTTTGAACTGTATTTCCTTATTCCTTTCCATTGCTTATGTGTTTCCAGGCCTGGAACAAGCCCTTCTGATATCCATGCTTACACTCTGGATTTTCATATGCAATCCTGAGAAGCAGATACAATATTTTCAAGCACTAGAATGCGGTTGGTATGTTCGTCAAGACTGAAACAGCTCCGGTGTTTTCATCAAAGCTTTAGTTGTGTACTTGTGGTGATAGTTCCATTCTTTCTAATCACTTATCTAGTAGTAAAAAGTCTTCCTGATTTGAGTTGTTCAAAATTGACTTATGATGTGTGCAGACTGAACTTATAAG</genome_strand>
        <mrna_strand>GGATATGGTGAAGGGGGATGTTCATCAGTCAAAATCCAGCGGCAAATCTCAATTGACCTACCAAGAGTTTCACATTTTTGCTATGTGGGGAGCTGTTACCCAGAAAAAATAATGCTCAAAGCTATACAGATTGTGGGTTCATCTTCTGGGTTTGCTTCCTATAGATTTAGAAAGCCTCAACCCAATTCTGCCTTCTCCTTAATTTCGAGAAAACCCATTCTCACAACATCTGAAACTTTGTTATTGCCGGCTTCTCAACTACATAGTCACAAGTCCTGTTTTAGAGATTTTCGAATGTCTTCAACTCATTCAAAGTCATCCTCTTCCTCATCTGTTGCAGTCCAGTCAACT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAAACATTCGCAAGATCAACTTCTGCCAGTTTTGCGGGGGCCCAAATAAGCATGAGATACCTGATGGTGAAGAAAAGGTGAGAGCTATCTGCACTCATTGTGGGAAGATTACATATGAGAATCCAAAAATG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTTGGTTGCCTTATTGAGCATGATAAGAAGATATTAATGTGCAGGCGCAAAATTCACCCATCATATGGACTTTG..................................................................................................................................................................GACGCTCCCAGCTGGCTATATGGAGATTGGTGAATCTGCTGCTGAGGGAGCAATTAGGGAAACCTGGGAAGAGGCAAATGCAGAAGTAGAGGTTCAATCACTTTTTGCTCAATTGGACATCCCTCTTATAGGACAA......................................................................................ACGTACATGATTTTTTTGGCAAAACTGAAAAATCCCCACTTTTCACCTGGTCCAGAATCATCAGAATGTCAGCTTTTTGAACTTGATGATATTCCTTTTGATTCTTTAGCATTTTCATCAATGCTAGTAAGCTTGAATCTG.........................................................................................................................TACATAGAAGATATTAAAGTTGGAAGACCGAAGTTCCATTATGGCGTCATTAACAAGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTGGAACAAGCCCTTCTGATATCCATGCTTACACTCTGGATTTTCATATGCAATCCTGAGAAGCAGATACAATATTTTCAAGCACTAGAATGCGGTTGGTATGTTCGTCAAGACTGAAACAGCTCTGGTGTTTTCATCAAAGCTTTAGTTGTGTACTTGTGGTGATAGTTCCATTCTTTCTAATCACTTATCTAGTAGTAAAAAGTCTTCCTGATTTGAGTTGTTCAAAATTGACTTATGATGTGTGCAGACTGAACTTATAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E232082" ref_strand="+" ref_description="SGN-E232082 [cLED-7-L21]">
      <seq>gactttggacgctcccagctggctatatggagattggtgaatctgctgctgagggagcaattagggaaacctgggaagaggcaaatgcagaagtagaggttcaatcactttttgctcaattggacatccctcttataggacaaacgtacatgatttttttggcaaaactgaaaaatccccacttttcacctggtccagaatcatcagaatgtcagctttttgaacttgatgatattccttttgattctttagcattttcatcaatgctagtaagcttgaatctgtacatagaagatattaaagttggaagaccgaagttccattatggcgtcattaacaagaggcctggaacaagcccttctgatatccatgcttacactctggattttcatatgcaatcctgagaagcagatacaatattttcaagcactagaatgcggttggtatgttcgtcaagactgaaacagctccggtgttttcatcaaagctttagttgtgtacttgtggtgatagttccattctttctaatcacttatctagtagtaaaaagtcttcctgatttgagttgttcaaaattgacttatgatgtgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C03HBa0013A17.1" temp_strand="-" temp_description="C03HBa0013A17.1  AC238559.1 htgs_phase:2 submitted_to_sgn_as:gi|261249975|gb|AC238559.1| upload_account_name:jianfeng-ren Solanum lycopersicum chromosome 3 clone C03HBa0013a17, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces">
        <position start="83366" stop="79367"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83232" g_stop="83226" g_length="7"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="7" r_length="7" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="83225" i_stop="83064" i_length="162">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="83063" g_stop="82928" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="8" r_stop="143" r_length="136" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="82927" i_stop="82842" i_length="86">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="82841" g_stop="82701" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="144" r_stop="284" r_length="141" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="82700" i_stop="82580" i_length="121">
            <donor d_prob="0.797" d_score="1.00"/>
            <acceptor a_prob="0.905" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="82579" g_stop="82521" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="285" r_stop="343" r_length="59" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="82520" i_stop="79915" i_length="2606">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="79914" g_stop="79667" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="344" r_stop="591" r_length="248" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C03HBa0013A17.1" gen_strand="-" ref_id="SGN-E232082" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>591</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C03HBa0013A17.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E232082" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83232" e_stop="83226"/>
          <exon e_start="83063" e_stop="82928"/>
          <exon e_start="82841" e_stop="82701"/>
          <exon e_start="82579" e_stop="82521"/>
          <exon e_start="79914" e_stop="79667"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACTTTGGTATGTGTCTACCAACAGAGTTTAGTGAGAAGGGAGGACTTCCTTCCACAACCTCTAAGAAAGTTCTCTATTAGTACCCAGAATTCAGAAATGTAGAGAGTACTGAAGTAATTCGAATTCCAGTATAGTAAAGTTTATCTTCAAATAATGTTGTACTGGTAGGACGCTCCCAGCTGGCTATATGGAGATTGGTGAATCTGCTGCTGAGGGAGCAATTAGGGAAACCTGGGAAGAGGCAAATGCAGAAGTAGAGGTTCAATCACTTTTTGCTCAATTGGACATCCCTCTTATAGGACAAGTTAGTATAAATTCTTGAAGATGGCATTTACCTCCTATGAATTATGACCGATATTGGTGATAATTATTTTTTCCTCATCTTTGCAGACGTACATGATTTTTTTGGCAAAACTGAAAAATCCCCACTTTTCACCTGGTCCAGAATCATCAGAATGTCAGCTTTTTGAACTTGATGATATTCCTTTTGATTCTTTAGCATTTTCATCAATGCTAGTAAGCTTGAATCTGGTAATTTTTTATGCTACATGGTTAAATATTAACTTTACAGAAAATATATATATGTGTGTGTTCATTTGCTTGCTCGCGCTAAAGTTAAATTATATCTCTCTCTTATTTCATCTCATTGTAGTACATAGAAGATATTAAAGTTGGAAGACCGAAGTTCCATTATGGCGTCATTAACAAGAGGTATGTTGGTCACCCTATGTTATAGTGTTCACTTAGTTCTAAGATCCTCAACAAAGCTTTAGTGATTTGTTGTTATGTAGCTAAAACTCTTTAAAATCATTGTCACACCTGTATTGATACAACATGGATGTGAGTGTAGGTGTGGGATAGATAGGATTTGGTCAACTTACCTTGGGTACTTTGACTACATCTATGGGCGAGAAGTATAGATTAATTGGGTATTTAGTTTGATTTTTGGGTTTATATAGTATGACTATGAGCATGTTTTACTATTATATCTTATCTTATGAATAAATATTACTCCTACTATCCAAATTTATGTGGAATGCTTTCCTTTTTAGTCTGTCCAAAAAGGAATGTGACCTTTCTATAATTAGAAATAACTTGACTTTAAATTTTTCCTTTTACCCTTGATGAAATGATTTATAGCCACACAAATACCTCAGGTTTGTTTTAGACCACATATTTCAAGTCTTTTCTTTTTTTCTTGAACTTTGTATTTCTGCACCCGAGTCCAAGCAACTTAGGTCTATTGTTCAAAGCATGCTAGGTAGTCCTATTTGAATATGTATGACAATTTAACAGAGAGCACTTCCGATATGAATATTATTTGTAGCTCAACTAATAAGATGAAATGTCATTTGTTTGATGAAGTAACTGATAGGAGAAATCCCAAACTATAAATGTTCTTTTATTCCCTGTTCTGCAAAGGTGCTGTATTTCTTTCTCATATTAGGTCACTAGAGTGTTGGCTAAAAACTGTCTCTATATTTCTCATTTTGCTGGAGAGGCTCCACTATCAGTCTTCTCGATATTAGCAAGCTATGGATTGTATCATCTTGTCTTTAAATATCATTTGACTGGAAAAGAGAGAAGATCCTCTCATAGTAACTTGATTAACGTCAGTACTATGGGTATGCCTTACAATGGTGGTGGTTATGCATTTTTACGCTCTCCATTCAAATTTATTTCTCAATTCTTTGGCCTTAAAATTAATTTCTCACTTCGTTGCGCTTCAAATTAAGTTCTCCCACTGTTGTCAAAGGCACACTTAAAGCACGCTTAAGCCCTAAAGTGAGGCTCAAAACACGGTGAGCGCTTCGCCTCGCCTTATATGTGCTTCAGTGTCGTCATCAAGGTTCTAAGGCATATTTATCCTTGCCAATGAGCCTTTGTTGAAGAGGCACACTAAACAATTGATATTTAACGTTATCATAATTTCTTTGTTTATATAATTGTCATTCATGTTTATAATTATTAGTTTTGGACAAAACATATATATATTTGTAATTTCCTCTTTGCGCCTTTTTTCATGAATGCCCATGCTTTATTTGCGCTTTTCACTTAAAGCCCCAATGGACCTTAGAGCTTTTTTGGGCTTTTTGCCTTTGATAACACTGAGTTCTCTGAAATTGCAATTTACTTTGCAAGACCAGCCCCAACTCTATGGAGCCGCATTGGCCCCTCTTACTATCCTAATCTTTGGTGAAGCGTAAATTAGTGTATAGAGTAGTTAGCTGTCTCTACAGTGGCAAGTTCATGTTTTTATTTCCTTTTAGCTCCTTCGATTGGGATGACTTAAGCTGGTAGGGTACCCATTTGTTTCTTCTAACATTTATTAGAACTCTGGATGTGATGAGCACCCAAGACTGCAACCCAGCTGTCAATGAGGTGGGAGAAAACCTTGGTGACCAGGGATCAAATCCCAACAAAGACAAACAAGGCTAGTTCATTTCCCCTTGTCTTTCTAACCTTTGTCGACAGAGTTACTCTATACCTATGCTGGTGAGAGGACAGGTACTGGCGGAATAATTGAGGTGCACACAAGTTGGCTCCGATACAATTATTATCTCCCCCCTACCCCCCCCCCCCCCCCAAAAAAAAAAGGATTGGATTAACATGCATGCGCAGGCTGAATCAAACACCACTGTTATCCAAAAAAATAAGCAGATTGGATTGACATGCATTTCGTCGTATATAACCCTATCTCTCAGTGGAATAATATGGCTGCAGATGTAAGGTAACACGTTTTGACCTGGGAGTAAATGTCTCATACAATTTGACTTTTAAGTTGAGATACATGTTATTACTCCCCCATTATTCAGTTCTTCTTAGATACTCCTTCTGTCCAACAATACTTGTCCACTATTGACTTTTTACACTTTCTTAAAAAACTATAAATGGAAAAGGTAAATTTACTATATCATCCTTTACATATTATAAATACAAATGTCTTGAAAAAAAGTAACATTGAAATGACTTAATTAATGATAAAGGTGAATTAGGAACTAAGTATAAAATTATCCATTGATTTCATCAAGTGGACAAGTATTGTTGAACATCCAAATAGTATAGTGGACAACTATTGTTGGACGGATGGAGTATTAGCTTATTTTTCCACTTCCGATGCTTGATTTCAAGGGCTGAGCATTTGCTGAAAACTAGGATGTTGAAGAGTTGAAGACTAAAATAGTTAGACCTGGGAATATGTATGTTGTTTGAAAGTTGAAACTGCACTACACTATGGCTCTTGGCTTTTTTTTCTGCCAAGAGCTTTTCTTTGAACTGTATTTCCTTATTCCTTTCCATTGCTTATGTGTTTCCAGGCCTGGAACAAGCCCTTCTGATATCCATGCTTACACTCTGGATTTTCATATGCAATCCTGAGAAGCAGATACAATATTTTCAAGCACTAGAATGCGGTTGGTATGTTCGTCAAGACTGAAACAGCTCCGGTGTTTTCATCAAAGCTTTAGTTGTGTACTTGTGGTGATAGTTCCATTCTTTCTAATCACTTATCTAGTAGTAAAAAGTCTTCCTGATTTGAGTTGTTCAAAATTGACTTATGATGTGT</genome_strand>
        <mrna_strand>GACTTTG..................................................................................................................................................................GACGCTCCCAGCTGGCTATATGGAGATTGGTGAATCTGCTGCTGAGGGAGCAATTAGGGAAACCTGGGAAGAGGCAAATGCAGAAGTAGAGGTTCAATCACTTTTTGCTCAATTGGACATCCCTCTTATAGGACAA......................................................................................ACGTACATGATTTTTTTGGCAAAACTGAAAAATCCCCACTTTTCACCTGGTCCAGAATCATCAGAATGTCAGCTTTTTGAACTTGATGATATTCCTTTTGATTCTTTAGCATTTTCATCAATGCTAGTAAGCTTGAATCTG.........................................................................................................................TACATAGAAGATATTAAAGTTGGAAGACCGAAGTTCCATTATGGCGTCATTAACAAGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTGGAACAAGCCCTTCTGATATCCATGCTTACACTCTGGATTTTCATATGCAATCCTGAGAAGCAGATACAATATTTTCAAGCACTAGAATGCGGTTGGTATGTTCGTCAAGACTGAAACAGCTCCGGTGTTTTCATCAAAGCTTTAGTTGTGTACTTGTGGTGATAGTTCCATTCTTTCTAATCACTTATCTAGTAGTAAAAAGTCTTCCTGATTTGAGTTGTTCAAAATTGACTTATGATGTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E238204" ref_strand="+" ref_description="SGN-E238204 [cLED-22-O7]">
      <seq>gactttttacgctcccagctggctatatggagattggtgaatctgctgctgagggagcaattagggaaacctgggaagaggcaaatgcagaagtagaggttcaatcactttttgctcaattggacatccctcttataggacaaacgtacatgatttttttggcaaaactgaaaaatccccacttttcacctggtccagaatcatcagaatgtcagctttttgaacttgatgatattccttttgattctttagcattttcatcaatgctagtaagcttgaatctgtacatagaagatattaaagttggaagaccgaagttccattatggcgtcattaacaagaggcctggaacaagcccttctgatatccatgcttacactctggattttcatatgcaatcctgagaagcagatacaatattttcaagcactagaatgcggttggtatgtttcgtcaagactgaaacagctccggtgttttcatcaaagctntagttgagtacttgtggtgatagttccattctttctaatcacttatctagtag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C03HBa0013A17.1" temp_strand="-" temp_description="C03HBa0013A17.1  AC238559.1 htgs_phase:2 submitted_to_sgn_as:gi|261249975|gb|AC238559.1| upload_account_name:jianfeng-ren Solanum lycopersicum chromosome 3 clone C03HBa0013a17, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces">
        <position start="83362" stop="79415"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83063" g_stop="82928" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="8" r_stop="143" r_length="136" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82927" i_stop="82842" i_length="86">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82841" g_stop="82701" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="144" r_stop="284" r_length="141" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="82700" i_stop="82580" i_length="121">
            <donor d_prob="0.797" d_score="1.00"/>
            <acceptor a_prob="0.905" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="82579" g_stop="82521" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="285" r_stop="343" r_length="59" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="82520" i_stop="79915" i_length="2606">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="79914" g_stop="79715" g_length="200"/>
          <reference_exon_boundary r_type="cDNA" r_start="344" r_stop="544" r_length="201" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C03HBa0013A17.1" gen_strand="-" ref_id="SGN-E238204" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>536</cumulative_length_of_scored_exons>
        <coverage percentage="0.985" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C03HBa0013A17.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E238204" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83063" e_stop="82928"/>
          <exon e_start="82841" e_stop="82701"/>
          <exon e_start="82579" e_stop="82521"/>
          <exon e_start="79914" e_stop="79715"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACGCTCCCAGCTGGCTATATGGAGATTGGTGAATCTGCTGCTGAGGGAGCAATTAGGGAAACCTGGGAAGAGGCAAATGCAGAAGTAGAGGTTCAATCACTTTTTGCTCAATTGGACATCCCTCTTATAGGACAAGTTAGTATAAATTCTTGAAGATGGCATTTACCTCCTATGAATTATGACCGATATTGGTGATAATTATTTTTTCCTCATCTTTGCAGACGTACATGATTTTTTTGGCAAAACTGAAAAATCCCCACTTTTCACCTGGTCCAGAATCATCAGAATGTCAGCTTTTTGAACTTGATGATATTCCTTTTGATTCTTTAGCATTTTCATCAATGCTAGTAAGCTTGAATCTGGTAATTTTTTATGCTACATGGTTAAATATTAACTTTACAGAAAATATATATATGTGTGTGTTCATTTGCTTGCTCGCGCTAAAGTTAAATTATATCTCTCTCTTATTTCATCTCATTGTAGTACATAGAAGATATTAAAGTTGGAAGACCGAAGTTCCATTATGGCGTCATTAACAAGAGGTATGTTGGTCACCCTATGTTATAGTGTTCACTTAGTTCTAAGATCCTCAACAAAGCTTTAGTGATTTGTTGTTATGTAGCTAAAACTCTTTAAAATCATTGTCACACCTGTATTGATACAACATGGATGTGAGTGTAGGTGTGGGATAGATAGGATTTGGTCAACTTACCTTGGGTACTTTGACTACATCTATGGGCGAGAAGTATAGATTAATTGGGTATTTAGTTTGATTTTTGGGTTTATATAGTATGACTATGAGCATGTTTTACTATTATATCTTATCTTATGAATAAATATTACTCCTACTATCCAAATTTATGTGGAATGCTTTCCTTTTTAGTCTGTCCAAAAAGGAATGTGACCTTTCTATAATTAGAAATAACTTGACTTTAAATTTTTCCTTTTACCCTTGATGAAATGATTTATAGCCACACAAATACCTCAGGTTTGTTTTAGACCACATATTTCAAGTCTTTTCTTTTTTTCTTGAACTTTGTATTTCTGCACCCGAGTCCAAGCAACTTAGGTCTATTGTTCAAAGCATGCTAGGTAGTCCTATTTGAATATGTATGACAATTTAACAGAGAGCACTTCCGATATGAATATTATTTGTAGCTCAACTAATAAGATGAAATGTCATTTGTTTGATGAAGTAACTGATAGGAGAAATCCCAAACTATAAATGTTCTTTTATTCCCTGTTCTGCAAAGGTGCTGTATTTCTTTCTCATATTAGGTCACTAGAGTGTTGGCTAAAAACTGTCTCTATATTTCTCATTTTGCTGGAGAGGCTCCACTATCAGTCTTCTCGATATTAGCAAGCTATGGATTGTATCATCTTGTCTTTAAATATCATTTGACTGGAAAAGAGAGAAGATCCTCTCATAGTAACTTGATTAACGTCAGTACTATGGGTATGCCTTACAATGGTGGTGGTTATGCATTTTTACGCTCTCCATTCAAATTTATTTCTCAATTCTTTGGCCTTAAAATTAATTTCTCACTTCGTTGCGCTTCAAATTAAGTTCTCCCACTGTTGTCAAAGGCACACTTAAAGCACGCTTAAGCCCTAAAGTGAGGCTCAAAACACGGTGAGCGCTTCGCCTCGCCTTATATGTGCTTCAGTGTCGTCATCAAGGTTCTAAGGCATATTTATCCTTGCCAATGAGCCTTTGTTGAAGAGGCACACTAAACAATTGATATTTAACGTTATCATAATTTCTTTGTTTATATAATTGTCATTCATGTTTATAATTATTAGTTTTGGACAAAACATATATATATTTGTAATTTCCTCTTTGCGCCTTTTTTCATGAATGCCCATGCTTTATTTGCGCTTTTCACTTAAAGCCCCAATGGACCTTAGAGCTTTTTTGGGCTTTTTGCCTTTGATAACACTGAGTTCTCTGAAATTGCAATTTACTTTGCAAGACCAGCCCCAACTCTATGGAGCCGCATTGGCCCCTCTTACTATCCTAATCTTTGGTGAAGCGTAAATTAGTGTATAGAGTAGTTAGCTGTCTCTACAGTGGCAAGTTCATGTTTTTATTTCCTTTTAGCTCCTTCGATTGGGATGACTTAAGCTGGTAGGGTACCCATTTGTTTCTTCTAACATTTATTAGAACTCTGGATGTGATGAGCACCCAAGACTGCAACCCAGCTGTCAATGAGGTGGGAGAAAACCTTGGTGACCAGGGATCAAATCCCAACAAAGACAAACAAGGCTAGTTCATTTCCCCTTGTCTTTCTAACCTTTGTCGACAGAGTTACTCTATACCTATGCTGGTGAGAGGACAGGTACTGGCGGAATAATTGAGGTGCACACAAGTTGGCTCCGATACAATTATTATCTCCCCCCTACCCCCCCCCCCCCCCCAAAAAAAAAAGGATTGGATTAACATGCATGCGCAGGCTGAATCAAACACCACTGTTATCCAAAAAAATAAGCAGATTGGATTGACATGCATTTCGTCGTATATAACCCTATCTCTCAGTGGAATAATATGGCTGCAGATGTAAGGTAACACGTTTTGACCTGGGAGTAAATGTCTCATACAATTTGACTTTTAAGTTGAGATACATGTTATTACTCCCCCATTATTCAGTTCTTCTTAGATACTCCTTCTGTCCAACAATACTTGTCCACTATTGACTTTTTACACTTTCTTAAAAAACTATAAATGGAAAAGGTAAATTTACTATATCATCCTTTACATATTATAAATACAAATGTCTTGAAAAAAAGTAACATTGAAATGACTTAATTAATGATAAAGGTGAATTAGGAACTAAGTATAAAATTATCCATTGATTTCATCAAGTGGACAAGTATTGTTGAACATCCAAATAGTATAGTGGACAACTATTGTTGGACGGATGGAGTATTAGCTTATTTTTCCACTTCCGATGCTTGATTTCAAGGGCTGAGCATTTGCTGAAAACTAGGATGTTGAAGAGTTGAAGACTAAAATAGTTAGACCTGGGAATATGTATGTTGTTTGAAAGTTGAAACTGCACTACACTATGGCTCTTGGCTTTTTTTTCTGCCAAGAGCTTTTCTTTGAACTGTATTTCCTTATTCCTTTCCATTGCTTATGTGTTTCCAGGCCTGGAACAAGCCCTTCTGATATCCATGCTTACACTCTGGATTTTCATATGCAATCCTGAGAAGCAGATACAATATTTTCAAGCACTAGAATGCGGTTGGTATG-TTCGTCAAGACTGAAACAGCTCCGGTGTTTTCATCAAAGCTTTAGTTGTGTACTTGTGGTGATAGTTCCATTCTTTCTAATCACTTATCTAGTAG</genome_strand>
        <mrna_strand>TACGCTCCCAGCTGGCTATATGGAGATTGGTGAATCTGCTGCTGAGGGAGCAATTAGGGAAACCTGGGAAGAGGCAAATGCAGAAGTAGAGGTTCAATCACTTTTTGCTCAATTGGACATCCCTCTTATAGGACAA......................................................................................ACGTACATGATTTTTTTGGCAAAACTGAAAAATCCCCACTTTTCACCTGGTCCAGAATCATCAGAATGTCAGCTTTTTGAACTTGATGATATTCCTTTTGATTCTTTAGCATTTTCATCAATGCTAGTAAGCTTGAATCTG.........................................................................................................................TACATAGAAGATATTAAAGTTGGAAGACCGAAGTTCCATTATGGCGTCATTAACAAGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTGGAACAAGCCCTTCTGATATCCATGCTTACACTCTGGATTTTCATATGCAATCCTGAGAAGCAGATACAATATTTTCAAGCACTAGAATGCGGTTGGTATGTTTCGTCAAGACTGAAACAGCTCCGGTGTTTTCATCAAAGCTNTAGTTGAGTACTTGTGGTGATAGTTCCATTCTTTCTAATCACTTATCTAGTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E238152" ref_strand="+" ref_description="SGN-E238152 [cLED-22-N10]">
      <seq>gactttggacgctcccagctggctatatggagattggtgaatctgctgctgagggagcaattagggaaacctgggaagaggcaaatgcagaagtagaggttcaatcactttttgctcaattggacatccctcttataggacaaacgtacatgatttttttggcaaaactgaaaaatccccacttttcacctggtccagaatcatcagaatgtcagctttttgaacttgatgatattccttttgattctttagcattttcatcaatgctagtaagcttgaatctgtacatagaagatattaaagttggaagaccgaagttccattatggcgtcattaacaagaggcctggaacaagcccttctgatatccatgcttacactctggattttcatatgcaatcctgagaagcagatacaatattttcaagcactagaatgcggttggtatgttcgtcaagactgaaacagctccagtgttttcatcaaagctttagttgtgtacttgtggtgatagttccattctttctaatcacttatctag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C03HBa0013A17.1" temp_strand="-" temp_description="C03HBa0013A17.1  AC238559.1 htgs_phase:2 submitted_to_sgn_as:gi|261249975|gb|AC238559.1| upload_account_name:jianfeng-ren Solanum lycopersicum chromosome 3 clone C03HBa0013a17, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces">
        <position start="83366" stop="79418"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83232" g_stop="83226" g_length="7"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="7" r_length="7" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="83225" i_stop="83064" i_length="162">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="83063" g_stop="82928" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="8" r_stop="143" r_length="136" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="82927" i_stop="82842" i_length="86">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="82841" g_stop="82701" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="144" r_stop="284" r_length="141" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="82700" i_stop="82580" i_length="121">
            <donor d_prob="0.797" d_score="1.00"/>
            <acceptor a_prob="0.905" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="82579" g_stop="82521" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="285" r_stop="343" r_length="59" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="82520" i_stop="79915" i_length="2606">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="79914" g_stop="79718" g_length="197"/>
          <reference_exon_boundary r_type="cDNA" r_start="344" r_stop="540" r_length="197" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C03HBa0013A17.1" gen_strand="-" ref_id="SGN-E238152" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>540</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C03HBa0013A17.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E238152" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83232" e_stop="83226"/>
          <exon e_start="83063" e_stop="82928"/>
          <exon e_start="82841" e_stop="82701"/>
          <exon e_start="82579" e_stop="82521"/>
          <exon e_start="79914" e_stop="79718"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACTTTGGTATGTGTCTACCAACAGAGTTTAGTGAGAAGGGAGGACTTCCTTCCACAACCTCTAAGAAAGTTCTCTATTAGTACCCAGAATTCAGAAATGTAGAGAGTACTGAAGTAATTCGAATTCCAGTATAGTAAAGTTTATCTTCAAATAATGTTGTACTGGTAGGACGCTCCCAGCTGGCTATATGGAGATTGGTGAATCTGCTGCTGAGGGAGCAATTAGGGAAACCTGGGAAGAGGCAAATGCAGAAGTAGAGGTTCAATCACTTTTTGCTCAATTGGACATCCCTCTTATAGGACAAGTTAGTATAAATTCTTGAAGATGGCATTTACCTCCTATGAATTATGACCGATATTGGTGATAATTATTTTTTCCTCATCTTTGCAGACGTACATGATTTTTTTGGCAAAACTGAAAAATCCCCACTTTTCACCTGGTCCAGAATCATCAGAATGTCAGCTTTTTGAACTTGATGATATTCCTTTTGATTCTTTAGCATTTTCATCAATGCTAGTAAGCTTGAATCTGGTAATTTTTTATGCTACATGGTTAAATATTAACTTTACAGAAAATATATATATGTGTGTGTTCATTTGCTTGCTCGCGCTAAAGTTAAATTATATCTCTCTCTTATTTCATCTCATTGTAGTACATAGAAGATATTAAAGTTGGAAGACCGAAGTTCCATTATGGCGTCATTAACAAGAGGTATGTTGGTCACCCTATGTTATAGTGTTCACTTAGTTCTAAGATCCTCAACAAAGCTTTAGTGATTTGTTGTTATGTAGCTAAAACTCTTTAAAATCATTGTCACACCTGTATTGATACAACATGGATGTGAGTGTAGGTGTGGGATAGATAGGATTTGGTCAACTTACCTTGGGTACTTTGACTACATCTATGGGCGAGAAGTATAGATTAATTGGGTATTTAGTTTGATTTTTGGGTTTATATAGTATGACTATGAGCATGTTTTACTATTATATCTTATCTTATGAATAAATATTACTCCTACTATCCAAATTTATGTGGAATGCTTTCCTTTTTAGTCTGTCCAAAAAGGAATGTGACCTTTCTATAATTAGAAATAACTTGACTTTAAATTTTTCCTTTTACCCTTGATGAAATGATTTATAGCCACACAAATACCTCAGGTTTGTTTTAGACCACATATTTCAAGTCTTTTCTTTTTTTCTTGAACTTTGTATTTCTGCACCCGAGTCCAAGCAACTTAGGTCTATTGTTCAAAGCATGCTAGGTAGTCCTATTTGAATATGTATGACAATTTAACAGAGAGCACTTCCGATATGAATATTATTTGTAGCTCAACTAATAAGATGAAATGTCATTTGTTTGATGAAGTAACTGATAGGAGAAATCCCAAACTATAAATGTTCTTTTATTCCCTGTTCTGCAAAGGTGCTGTATTTCTTTCTCATATTAGGTCACTAGAGTGTTGGCTAAAAACTGTCTCTATATTTCTCATTTTGCTGGAGAGGCTCCACTATCAGTCTTCTCGATATTAGCAAGCTATGGATTGTATCATCTTGTCTTTAAATATCATTTGACTGGAAAAGAGAGAAGATCCTCTCATAGTAACTTGATTAACGTCAGTACTATGGGTATGCCTTACAATGGTGGTGGTTATGCATTTTTACGCTCTCCATTCAAATTTATTTCTCAATTCTTTGGCCTTAAAATTAATTTCTCACTTCGTTGCGCTTCAAATTAAGTTCTCCCACTGTTGTCAAAGGCACACTTAAAGCACGCTTAAGCCCTAAAGTGAGGCTCAAAACACGGTGAGCGCTTCGCCTCGCCTTATATGTGCTTCAGTGTCGTCATCAAGGTTCTAAGGCATATTTATCCTTGCCAATGAGCCTTTGTTGAAGAGGCACACTAAACAATTGATATTTAACGTTATCATAATTTCTTTGTTTATATAATTGTCATTCATGTTTATAATTATTAGTTTTGGACAAAACATATATATATTTGTAATTTCCTCTTTGCGCCTTTTTTCATGAATGCCCATGCTTTATTTGCGCTTTTCACTTAAAGCCCCAATGGACCTTAGAGCTTTTTTGGGCTTTTTGCCTTTGATAACACTGAGTTCTCTGAAATTGCAATTTACTTTGCAAGACCAGCCCCAACTCTATGGAGCCGCATTGGCCCCTCTTACTATCCTAATCTTTGGTGAAGCGTAAATTAGTGTATAGAGTAGTTAGCTGTCTCTACAGTGGCAAGTTCATGTTTTTATTTCCTTTTAGCTCCTTCGATTGGGATGACTTAAGCTGGTAGGGTACCCATTTGTTTCTTCTAACATTTATTAGAACTCTGGATGTGATGAGCACCCAAGACTGCAACCCAGCTGTCAATGAGGTGGGAGAAAACCTTGGTGACCAGGGATCAAATCCCAACAAAGACAAACAAGGCTAGTTCATTTCCCCTTGTCTTTCTAACCTTTGTCGACAGAGTTACTCTATACCTATGCTGGTGAGAGGACAGGTACTGGCGGAATAATTGAGGTGCACACAAGTTGGCTCCGATACAATTATTATCTCCCCCCTACCCCCCCCCCCCCCCCAAAAAAAAAAGGATTGGATTAACATGCATGCGCAGGCTGAATCAAACACCACTGTTATCCAAAAAAATAAGCAGATTGGATTGACATGCATTTCGTCGTATATAACCCTATCTCTCAGTGGAATAATATGGCTGCAGATGTAAGGTAACACGTTTTGACCTGGGAGTAAATGTCTCATACAATTTGACTTTTAAGTTGAGATACATGTTATTACTCCCCCATTATTCAGTTCTTCTTAGATACTCCTTCTGTCCAACAATACTTGTCCACTATTGACTTTTTACACTTTCTTAAAAAACTATAAATGGAAAAGGTAAATTTACTATATCATCCTTTACATATTATAAATACAAATGTCTTGAAAAAAAGTAACATTGAAATGACTTAATTAATGATAAAGGTGAATTAGGAACTAAGTATAAAATTATCCATTGATTTCATCAAGTGGACAAGTATTGTTGAACATCCAAATAGTATAGTGGACAACTATTGTTGGACGGATGGAGTATTAGCTTATTTTTCCACTTCCGATGCTTGATTTCAAGGGCTGAGCATTTGCTGAAAACTAGGATGTTGAAGAGTTGAAGACTAAAATAGTTAGACCTGGGAATATGTATGTTGTTTGAAAGTTGAAACTGCACTACACTATGGCTCTTGGCTTTTTTTTCTGCCAAGAGCTTTTCTTTGAACTGTATTTCCTTATTCCTTTCCATTGCTTATGTGTTTCCAGGCCTGGAACAAGCCCTTCTGATATCCATGCTTACACTCTGGATTTTCATATGCAATCCTGAGAAGCAGATACAATATTTTCAAGCACTAGAATGCGGTTGGTATGTTCGTCAAGACTGAAACAGCTCCGGTGTTTTCATCAAAGCTTTAGTTGTGTACTTGTGGTGATAGTTCCATTCTTTCTAATCACTTATCTAG</genome_strand>
        <mrna_strand>GACTTTG..................................................................................................................................................................GACGCTCCCAGCTGGCTATATGGAGATTGGTGAATCTGCTGCTGAGGGAGCAATTAGGGAAACCTGGGAAGAGGCAAATGCAGAAGTAGAGGTTCAATCACTTTTTGCTCAATTGGACATCCCTCTTATAGGACAA......................................................................................ACGTACATGATTTTTTTGGCAAAACTGAAAAATCCCCACTTTTCACCTGGTCCAGAATCATCAGAATGTCAGCTTTTTGAACTTGATGATATTCCTTTTGATTCTTTAGCATTTTCATCAATGCTAGTAAGCTTGAATCTG.........................................................................................................................TACATAGAAGATATTAAAGTTGGAAGACCGAAGTTCCATTATGGCGTCATTAACAAGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTGGAACAAGCCCTTCTGATATCCATGCTTACACTCTGGATTTTCATATGCAATCCTGAGAAGCAGATACAATATTTTCAAGCACTAGAATGCGGTTGGTATGTTCGTCAAGACTGAAACAGCTCCAGTGTTTTCATCAAAGCTTTAGTTGTGTACTTGTGGTGATAGTTCCATTCTTTCTAATCACTTATCTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E244712" ref_strand="+" ref_description="SGN-E244712 [cLED-38-O2]">
      <seq>gactttggacgctcccagctggctatatggagattggtgaatctgctgctgagggagcaattagggaaacctgggaagaggcaaatgcagaagtagaggttcaatcactttttgctcaattggacatccctcttataggacaaacgtacatgatttttttggcaaaactgaaaaatccccacttttcacctggtccagaatcatcagaatgtcagctttttgaacttgatgatattccttttgattctttagcattttcatcaatgctagtaagcttgaatctgtacatagaagatattaaagttggaagaccgaagttccattatggcgtcattaacaagaggcctggaacaagcccttctgatatccatgcttacactctggattttcatatgcaatcctgagaagcagatacaatattttcaagcactanaatgcggttggtatgttcgtcaagactgaaacagctccggtgttttcatcaaagctttagttgtgtac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C03HBa0013A17.1" temp_strand="-" temp_description="C03HBa0013A17.1  AC238559.1 htgs_phase:2 submitted_to_sgn_as:gi|261249975|gb|AC238559.1| upload_account_name:jianfeng-ren Solanum lycopersicum chromosome 3 clone C03HBa0013a17, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces">
        <position start="83366" stop="79457"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83232" g_stop="83226" g_length="7"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="7" r_length="7" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="83225" i_stop="83064" i_length="162">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="83063" g_stop="82928" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="8" r_stop="143" r_length="136" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="82927" i_stop="82842" i_length="86">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="82841" g_stop="82701" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="144" r_stop="284" r_length="141" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="82700" i_stop="82580" i_length="121">
            <donor d_prob="0.797" d_score="1.00"/>
            <acceptor a_prob="0.905" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="82579" g_stop="82521" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="285" r_stop="343" r_length="59" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="82520" i_stop="79915" i_length="2606">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="79914" g_stop="79757" g_length="158"/>
          <reference_exon_boundary r_type="cDNA" r_start="344" r_stop="501" r_length="158" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C03HBa0013A17.1" gen_strand="-" ref_id="SGN-E244712" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>501</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C03HBa0013A17.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E244712" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83232" e_stop="83226"/>
          <exon e_start="83063" e_stop="82928"/>
          <exon e_start="82841" e_stop="82701"/>
          <exon e_start="82579" e_stop="82521"/>
          <exon e_start="79914" e_stop="79757"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACTTTGGTATGTGTCTACCAACAGAGTTTAGTGAGAAGGGAGGACTTCCTTCCACAACCTCTAAGAAAGTTCTCTATTAGTACCCAGAATTCAGAAATGTAGAGAGTACTGAAGTAATTCGAATTCCAGTATAGTAAAGTTTATCTTCAAATAATGTTGTACTGGTAGGACGCTCCCAGCTGGCTATATGGAGATTGGTGAATCTGCTGCTGAGGGAGCAATTAGGGAAACCTGGGAAGAGGCAAATGCAGAAGTAGAGGTTCAATCACTTTTTGCTCAATTGGACATCCCTCTTATAGGACAAGTTAGTATAAATTCTTGAAGATGGCATTTACCTCCTATGAATTATGACCGATATTGGTGATAATTATTTTTTCCTCATCTTTGCAGACGTACATGATTTTTTTGGCAAAACTGAAAAATCCCCACTTTTCACCTGGTCCAGAATCATCAGAATGTCAGCTTTTTGAACTTGATGATATTCCTTTTGATTCTTTAGCATTTTCATCAATGCTAGTAAGCTTGAATCTGGTAATTTTTTATGCTACATGGTTAAATATTAACTTTACAGAAAATATATATATGTGTGTGTTCATTTGCTTGCTCGCGCTAAAGTTAAATTATATCTCTCTCTTATTTCATCTCATTGTAGTACATAGAAGATATTAAAGTTGGAAGACCGAAGTTCCATTATGGCGTCATTAACAAGAGGTATGTTGGTCACCCTATGTTATAGTGTTCACTTAGTTCTAAGATCCTCAACAAAGCTTTAGTGATTTGTTGTTATGTAGCTAAAACTCTTTAAAATCATTGTCACACCTGTATTGATACAACATGGATGTGAGTGTAGGTGTGGGATAGATAGGATTTGGTCAACTTACCTTGGGTACTTTGACTACATCTATGGGCGAGAAGTATAGATTAATTGGGTATTTAGTTTGATTTTTGGGTTTATATAGTATGACTATGAGCATGTTTTACTATTATATCTTATCTTATGAATAAATATTACTCCTACTATCCAAATTTATGTGGAATGCTTTCCTTTTTAGTCTGTCCAAAAAGGAATGTGACCTTTCTATAATTAGAAATAACTTGACTTTAAATTTTTCCTTTTACCCTTGATGAAATGATTTATAGCCACACAAATACCTCAGGTTTGTTTTAGACCACATATTTCAAGTCTTTTCTTTTTTTCTTGAACTTTGTATTTCTGCACCCGAGTCCAAGCAACTTAGGTCTATTGTTCAAAGCATGCTAGGTAGTCCTATTTGAATATGTATGACAATTTAACAGAGAGCACTTCCGATATGAATATTATTTGTAGCTCAACTAATAAGATGAAATGTCATTTGTTTGATGAAGTAACTGATAGGAGAAATCCCAAACTATAAATGTTCTTTTATTCCCTGTTCTGCAAAGGTGCTGTATTTCTTTCTCATATTAGGTCACTAGAGTGTTGGCTAAAAACTGTCTCTATATTTCTCATTTTGCTGGAGAGGCTCCACTATCAGTCTTCTCGATATTAGCAAGCTATGGATTGTATCATCTTGTCTTTAAATATCATTTGACTGGAAAAGAGAGAAGATCCTCTCATAGTAACTTGATTAACGTCAGTACTATGGGTATGCCTTACAATGGTGGTGGTTATGCATTTTTACGCTCTCCATTCAAATTTATTTCTCAATTCTTTGGCCTTAAAATTAATTTCTCACTTCGTTGCGCTTCAAATTAAGTTCTCCCACTGTTGTCAAAGGCACACTTAAAGCACGCTTAAGCCCTAAAGTGAGGCTCAAAACACGGTGAGCGCTTCGCCTCGCCTTATATGTGCTTCAGTGTCGTCATCAAGGTTCTAAGGCATATTTATCCTTGCCAATGAGCCTTTGTTGAAGAGGCACACTAAACAATTGATATTTAACGTTATCATAATTTCTTTGTTTATATAATTGTCATTCATGTTTATAATTATTAGTTTTGGACAAAACATATATATATTTGTAATTTCCTCTTTGCGCCTTTTTTCATGAATGCCCATGCTTTATTTGCGCTTTTCACTTAAAGCCCCAATGGACCTTAGAGCTTTTTTGGGCTTTTTGCCTTTGATAACACTGAGTTCTCTGAAATTGCAATTTACTTTGCAAGACCAGCCCCAACTCTATGGAGCCGCATTGGCCCCTCTTACTATCCTAATCTTTGGTGAAGCGTAAATTAGTGTATAGAGTAGTTAGCTGTCTCTACAGTGGCAAGTTCATGTTTTTATTTCCTTTTAGCTCCTTCGATTGGGATGACTTAAGCTGGTAGGGTACCCATTTGTTTCTTCTAACATTTATTAGAACTCTGGATGTGATGAGCACCCAAGACTGCAACCCAGCTGTCAATGAGGTGGGAGAAAACCTTGGTGACCAGGGATCAAATCCCAACAAAGACAAACAAGGCTAGTTCATTTCCCCTTGTCTTTCTAACCTTTGTCGACAGAGTTACTCTATACCTATGCTGGTGAGAGGACAGGTACTGGCGGAATAATTGAGGTGCACACAAGTTGGCTCCGATACAATTATTATCTCCCCCCTACCCCCCCCCCCCCCCCAAAAAAAAAAGGATTGGATTAACATGCATGCGCAGGCTGAATCAAACACCACTGTTATCCAAAAAAATAAGCAGATTGGATTGACATGCATTTCGTCGTATATAACCCTATCTCTCAGTGGAATAATATGGCTGCAGATGTAAGGTAACACGTTTTGACCTGGGAGTAAATGTCTCATACAATTTGACTTTTAAGTTGAGATACATGTTATTACTCCCCCATTATTCAGTTCTTCTTAGATACTCCTTCTGTCCAACAATACTTGTCCACTATTGACTTTTTACACTTTCTTAAAAAACTATAAATGGAAAAGGTAAATTTACTATATCATCCTTTACATATTATAAATACAAATGTCTTGAAAAAAAGTAACATTGAAATGACTTAATTAATGATAAAGGTGAATTAGGAACTAAGTATAAAATTATCCATTGATTTCATCAAGTGGACAAGTATTGTTGAACATCCAAATAGTATAGTGGACAACTATTGTTGGACGGATGGAGTATTAGCTTATTTTTCCACTTCCGATGCTTGATTTCAAGGGCTGAGCATTTGCTGAAAACTAGGATGTTGAAGAGTTGAAGACTAAAATAGTTAGACCTGGGAATATGTATGTTGTTTGAAAGTTGAAACTGCACTACACTATGGCTCTTGGCTTTTTTTTCTGCCAAGAGCTTTTCTTTGAACTGTATTTCCTTATTCCTTTCCATTGCTTATGTGTTTCCAGGCCTGGAACAAGCCCTTCTGATATCCATGCTTACACTCTGGATTTTCATATGCAATCCTGAGAAGCAGATACAATATTTTCAAGCACTAGAATGCGGTTGGTATGTTCGTCAAGACTGAAACAGCTCCGGTGTTTTCATCAAAGCTTTAGTTGTGTAC</genome_strand>
        <mrna_strand>GACTTTG..................................................................................................................................................................GACGCTCCCAGCTGGCTATATGGAGATTGGTGAATCTGCTGCTGAGGGAGCAATTAGGGAAACCTGGGAAGAGGCAAATGCAGAAGTAGAGGTTCAATCACTTTTTGCTCAATTGGACATCCCTCTTATAGGACAA......................................................................................ACGTACATGATTTTTTTGGCAAAACTGAAAAATCCCCACTTTTCACCTGGTCCAGAATCATCAGAATGTCAGCTTTTTGAACTTGATGATATTCCTTTTGATTCTTTAGCATTTTCATCAATGCTAGTAAGCTTGAATCTG.........................................................................................................................TACATAGAAGATATTAAAGTTGGAAGACCGAAGTTCCATTATGGCGTCATTAACAAGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTGGAACAAGCCCTTCTGATATCCATGCTTACACTCTGGATTTTCATATGCAATCCTGAGAAGCAGATACAATATTTTCAAGCACTANAATGCGGTTGGTATGTTCGTCAAGACTGAAACAGCTCCGGTGTTTTCATCAAAGCTTTAGTTGTGTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E723426" ref_strand="+" ref_description="SGN-E723426 [FC20BG11]">
      <seq>gggggagctgttacccagaaaaaataatgctcactgtaaaacagattgtgggttcatcttctgggtttgcttcctatagatttagaaagcctcaacccaattctgccttctccttaatttcgagaaaacccattctcacaacatctgaaactttgttatttccggcttctcaactacatagtcacaagtcctgttttagagattttcgaatgtcttcaactcattcaaagtcatcctcttcttcatctgttgcagtccagtcaactggaaacattcgcaagatcaacttctgccagttttgcgggggcccaaataagcatgagatacctgatggtgaagaaaaggtgagagctatctgcactcattgtgggaagattacatatgagaatccaaaaatggttgttggttgccttattgagcatgataagaagatattaatgtgcaggcgcaaaattcacccatcatatggactttggacgctcccagctggctatatggagattggtgaatctgctgctgagggagcaattagggaaacctgggaagaggcaaatgcagaagtagaggttcaatcactttttgctcaattggacatccctcttataggacaaacgtacatgatttttttggcaaaactgaaaaatccccacttttcacctggtccagaatcatcagaatgtcagctttttgaacttgatgatattccttttgattctttagcattttcatcaatgctagtaagcttgaatct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C03HBa0013A17.1" temp_strand="-" temp_description="C03HBa0013A17.1  AC238559.1 htgs_phase:2 submitted_to_sgn_as:gi|261249975|gb|AC238559.1| upload_account_name:jianfeng-ren Solanum lycopersicum chromosome 3 clone C03HBa0013a17, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces">
        <position start="91607" stop="82402"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91308" g_stop="91043" g_length="266"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="266" r_length="266" r_score="0.974"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91042" i_stop="86055" i_length="4988">
            <donor d_prob="0.902" d_score="1.00"/>
            <acceptor a_prob="0.900" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="86054" g_stop="85923" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="267" r_stop="398" r_length="132" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="85922" i_stop="83303" i_length="2620">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.954" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="83302" g_stop="83226" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="399" r_stop="475" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="83225" i_stop="83064" i_length="162">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="83063" g_stop="82928" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="476" r_stop="611" r_length="136" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="82927" i_stop="82842" i_length="86">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="82841" g_stop="82702" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="612" r_stop="751" r_length="140" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C03HBa0013A17.1" gen_strand="-" ref_id="SGN-E723426" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>751</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C03HBa0013A17.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E723426" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91308" e_stop="91043"/>
          <exon e_start="86054" e_stop="85923"/>
          <exon e_start="83302" e_stop="83226"/>
          <exon e_start="83063" e_stop="82928"/>
          <exon e_start="82841" e_stop="82702"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGGGAGCTGTTACCCAGAAAAAATAATGCTCAAAGCTATACAGATTGTGGGTTCATCTTCTGGGTTTGCTTCCTATAGATTTAGAAAGCCTCAACCCAATTCTGCCTTCTCCTTAATTTCGAGAAAACCCATTCTCACAACATCTGAAACTTTGTTATTGCCGGCTTCTCAACTACATAGTCACAAGTCCTGTTTTAGAGATTTTCGAATGTCTTCAACTCATTCAAAGTCATCCTCTTCTTCATCTGTTGCAGTCCAGTCAACTGTGAGTTGTTGTTGTTACACCTGTGCATTTCTTTTGATTTACTGAAATTGATGTCTCTAAAGTGTTTGATTTTGTAATTTCTGGTGCCATTTTGCTGGACTGATTGTTGAGGAGGTTGCATATTGGAATGGAATTTGATTACTTGAACTAAAACTATTTGTTTGGGTAGGTATGAATCAATCACAAATAACATAAGTGAAATAGAGGGTGAAGTAGATAGTTTAGTTGATTTCATAGGACAATTTCAGAGCCACCTATCTAGACTTTGATCTTGATGATGCCCTCTGGGGTTGTAAAACCCACCCATCAGCTTTTACTTGATGTTTTTTTTTTTTTTGGTGTGAATACATAGTTACCATTATCAAAAAAGAAATAATCCTATATTCAATCATGAATCATCTATGCTCCAGTCCAGTGCCTTAATTTTAGGTTAGAAATTCTTGGCTTATCTAGAGTGCCAGATGTTATATTTAACATTTTTGGATTTCACGAATACCCTTTCACAGATATATGTTGGAATTTGAATGGATTGTGCACCTCTTTTGATGGTTGTTGATTTACTGAAAGAGATGACTGAAGGTGCTGGATTGTGCCATTTCTAGTTCCATTTTCTTTGTCTGTTGTTGGTTGTTCATTCTTTTTGTCTGAGCCCTGAGGTTATGTCTTGGCACATCGAATGAGATTCAAAGTGGTGTTTGACAAAGATAAGCACAGGTTTAACGCTATTTTGGACACTTTTGTTAAATAAACACAAGGTTGATTGAACTAGAATGTTTTCTATTTGACCCTTCAAGGTGGCCCAATGGTTTGCGCTTGGGACTTCCATGTTGGAGGCCTCAAGTTCGGAACCCCTTGCCAGCAAAAGCAAGGGGTTTGCCTTCTGGGTCGAGCTCCTGGTGCGGGTTACCTTTCCTATATGGTTTGCGAGCTATTGCATAGGAGCGGGGGTTTTACCCTGTGCGCACCCAAAGTGTAGCGACTGCGGGTTTCCCTTGCCATAAAAAAAAAGAATGTTTTATTTGTTTTTGTGTTAAGCATTTAGCTATTTTACCTCTTACGCAACAATTTTTGTATAAAATGAAGCCTCTGCGTTTAAAGCCTAACTAAATTATCTTTACTCATCGGGCTTTTGATGCATGCCGATAAACCATATTTGATGACCCATTTTTATTCTCTTTCTATCATTTTCTGCAAATAAATTTTGCATATATTCTGTTCATTGAAACTGCTAAATGAAAGTACGGACTAAGAAGATCAGGTATTGAATTAAAAGATGCTTTCTCTCTCTCTCCTTTGTCCTTCGCTATATTCTTGTTGACCTCATTTCCAATGCAACCTTGTTTCCATCTTATTTTCTAGCTAGCTCAATCTTGTTTACTTTATATTCTCCACATCTTGCTTAATAATCAAGTGCCTACTTTGATTTGTTGCTCAAACATTACCAAATGTAGGTGTTAACACCCTTTTAGTCTGCCAATGGTCTACACATGGAATATTTAAGGAAATTTGGAAGTAGAATTCATCAGCTTATAAGTTATTTATTTTTATTTCTGTCCAGCAGTGTTTTTAGTAGATTATTACAGCTTTTTAGTTATTTATTATCCCTATTTCTAAGTAGCAGTTGTTGCAGTAAGGAGGTTATTACTCCACTTTCTCATTTAGTTGTAGTAGGCAGTTTTAGTAGACAGCAGACAATTATTTTCCCTGTTTCAGTGTTGTATTTAATGTATTTGAATTCAGTGAAATAATAAGCAGAAAATAAGTCAAGTTTTTGAGTACTTCAAACTCAAGAGATCGCAGGTTCTCTCTTAACGAACCAGCACCATAAGTCGTAGGAAGAGAACTTCAGATTTCATATTCCAGCGTCCCATAACGAGATCCATAACAGGGACCATAACAGTAGGCCTGATATCAAATCTTCAATTTAAAGCTGCTTTATCTTCTGCTACGTTTGAGCAAAACTAACATCATAAGTCCAAAGCCATATATTCTGCTGTAAAATGCCTTTGTTGGAAGTAGTAAACATCACCTTTCCACCCATGTATTAATTTTTTCTGATGATACACCTCTGGCTTGCCCGAATCCCCCCTCCCCCCCCCCCCCTTCCCTTGTGCCATTGCTTCCACACATGACTCTTCATTTCTTGGATCCCTTTACTGGCGGAGTCATTTCCATGCACTTCTCTTCCTTATTCACTTCTTTTGCCTCATGCTATCTATCTTTATGAATAACATCGTTGCTTCCTCTTTGCACCCTTTGATATCTATCGAACTCTTCGGCGAATAAGATGATGTTCTGATGTATCCATATAGGGACATCAAAGTTTGGATCTTCTCTTCCCCCCCGGGGTATGTTGGCTCAAAGGTATTGCATCTCGAATGTTGTCAAGCTGGAATTGTTTTCTTCACTTTTCAGCATAGCGGATTCTTGCATACCACTATCTTCCCAAGGTTGAGGGATTTCAGAAATTTCTGGATTCTTTACTATCGCTTCCTCTTCTTCACTCTTTTCATGAGTTGGAAAGATTGGCTTCAAGTTCGACAGATATTGGGTCAATTAAATTAGAGGAAGAGTCATTCACTAGCCCATTTGAGATGAACTGCACCAGCAGATCTGGGCCCAAACTTTTCCTTCTAATCATAGGCCTCTTTCTCTTGATTGGGGTGGAAAGTGGGACCTCAGTCACGTGTGCCTTGTCACTTGCTGGCACATTGACCAGTTCATCACTTCAGGGTGGTCGGAGGAACCCATGTGCCCTGCCACCTTTGTAAAGCCTAAAAGGCTTTCATGTTCTAATCCACCAGTTCCTTCGTCAAACCTCTTGATCTTTGGATGTTCTTTGCTGCGTGCACCGTAAACCACCCTCGCCGGCGTCGCAACCCAGATTCGGACTTTCAAGGTTAAATGTTAGTGGACCAGCTCCACCGAGTTCGGAACAGAGACTCTGTCTCCTCTGACCTTCATCCTTGCCCATTTGAGGTGATTTCATAACTCAGTTTCTTCTTCAGTTCTAATCCAGCCTCCACATAAGTTTCCTACCTCACGGAAAATTTTTTGGGACCAAAGTTGGAGGAGCAAACCTACTACTCTGATACAGACCTGGTTCGGCCTATCATGGATGGAAGTCAATGTCAGCAACCACCACTGTAGGTTGAACTTGTAGGATTTCCACCACTTCCCTCTTACAATGTGGTCTGCAGCTGGTTTGTTGGGAAACTCAAAGAGGAAACGATTGTGCCCCAAATCGTAGATGTTGATTCCATGCTTGTGCTTCCAAGTGCTTGCCACCCACCGTCAAATCTCTGATAGAAAGGCATCTGGAAATTGGAATCTCCTCTGGGGGACATCCAACCACACCTTTTGCTAGTAGTTCATTTTGATTTGTTGTTGTCGAATCTGTAATAAAGATCAATTTCCTTTTTTTGTTGAATCTTGTAGCATTTATTCTATTGTACACCATTTATTGTTTCTGACATGTGAATAGAAGAGACCCTCTTCTGTTTTCCTGTGCAACATCTTAACTGCCTTCTGGGCCTTAGCGTTTATGAAATTCATTATTTTGGTAGCTATGCCTATCCATCCTGGGTTTAGTGACTACTCGGGGATGATGATGACAACTCTTCTCTTACCCTGCATATTTGAAATGCTAACTTATTGACCATATTTGTTATAATTCCTTGAGCAGAAGAACTCTGTGAACTGGTCCCGAAACTTCCATCTATGGACTGAATTTCCGTATGCTTCTTTAAGAGCAAATGCTAGCCGCTCATCGTCTTGTAGATAGTACTATCGTGTTCATCATGTTACAACCTCGTTCTGCCCAGTCTTACCATGTTTCAGCCCTAGAAACTACTTTGGTAATATCGTAAGATTTGAATCCTACAGCAAAATAAATGGTATAGTCCTCCATGGTTGTAACAAAGAAAAAAAGGTTGGAGAGGACTTGGGTTGAGGGAGGTTCTAGCAATGGAAGATTGCCGGAAAAGGGATTCTAGGGGCCCAGAAGAGAGCTGCAAAAGTTTCCTCGGGTAATGTGCCTGGTAGCATTTTGACTGGAAGTGATTTAATCTCTTTAATGATCCCTTTTATTATCAATTTTCCATAAGAAAAATATTATAAAGCAACAAGCATACATTTCCCAAAAAAGTCCTGCAAAAACTTTGATGTGAATATACCATCTGATGAAAAATACCTAATCACATCCTAACATCAACCTAGCGGTCAAAACATGCGCACTTGTCCAAAATGGAAGGCAATATGCAATCAGAAATAAATGGAAGTGGCTTCTTATTGCACATAGCATTCTTCTAAATGCTGGCATGCCTATGATTCTAGGTATCTGATATAGAATTGGCTGTACAAGTTGAAAACAACCAAAATCTGTTACGAACTGAGGCATTCAACTGGAGTTTCTCTCTCCTCTTCTCTCCAGCCTTATCTTTCGTTTCTCTTCCTACAAAGAGTTTTTTCATGCCAGTTGTGAAGAATAATGAACCTTGAGCTTGTCAACCCAAAGGTTAGCTTATATGTGAGGATTTCCCAACATCATATAAGGACATGAGAGCTCATTTCTTCAATCAACACAAACACTCTTAACACCCCACCCTGCACATCCAAGGGCTGGACATTTGAAGTATGACTAAATAACATGGGGGTCCAACAATATATAAACCAAGAATAGGAATGAGTCCGATGCTAATACCATTTGAAGGAAAATGAACTCTGGGCATGCTAATACCATTTGAAGAAAATGAACTTTGGGCATAACTCAACTCCAAAAGCTAGTTCATGAGGTGAGACATGCCCAACGTCATGTAAGGTTACAGCAAACCCTCTCTCCACTAATGCGAGATACTGTTACCACCAGCCAATTTTTTTAAAATTCACCTTTATGTTATTTAAATAGATCTGAGAGCATTTTGTGTTTCATAAATTGTTCAGGTTCCTTTATCTTTTCCTTGATTGATTTCAGTTCAAAGATTTTGCAGGGAAACATTCGCAAGATCAACTTCTGCCAGTTTTGCGGGGGCCCAAATAAGCATGAGATACCTGATGGTGAAGAAAAGGTGAGAGCTATCTGCACTCATTGTGGGAAGATTACATATGAGAATCCAAAAATGGTAAGATTTTCATTAAGCTTCACTGTTCCGCTTGTATTCTTGATTAAATGCAGATTAATCATTGTATTCTTTCTCAAAAAAAAAAAAAACTCATTGTATTACCTCTTGCAATCGTAATGACCACATTATTTTCCTTTGTCTTTTCAGTGCCTACATGTTTGGTGGTCAAATTTCAGTATTAATGATGTGGGAATATTCATTTTTGTTTAGAACCAGCTATAATCACCCAGCCAAATCAATTTGGTGACAGTGGTTCAATTCGATGGTTTGAATTTTGTTTATGATTTTATTTTTGGTTTCATATGGGGGACAGTTTCAAATATGTATACACCTAATCATATCGAAAGGTGTAGTACAGTGGTCATTGAGGTGAGTACAAATCTAAGAGATCAGGGTTCAAATCCCCGTTGAGACAAAAGAAGAACACTAGATTATTTCTTCTCTATCTGCCTAAGATTTGGAAGTTTGCCACATAATGTACTATGCTTCTTTTAGTAGACCTCTTTAAGGTCATGGTACATCTTCGTGGAACCAGGATGAATAGAATACCATGGGCAAGGTGCTTCACTCATAATGTTCTCTTGAAGCGCTTCATTATCGGGAACATATAATCTGTCTTGGCAGCTTAAGGTGCCATCTCCTGCGAGCTTAAATCCTGTGACTTCTACGTTGGCGGATCCTCTCTTTATACTGAAGTAACAAGGGGTCATCACACTTCTTCTCTTTCACTGTTGCCGTTAAGGATGACGTTGTAGTATACTGGACAACTACTTCACCATCTTCAGAGTCCATGAGTCGGACTCCAAAGCTTGCTAATCCTATGTGCTAAACTCCCCATATACAGTTGGGATTTGATAAATATGATAGACAATACTTTGTTTGTTTATTCATAGTCTCCCCCTACTTTTGCTCTCATGAATCTTAGATTATAATTACCTTTTGGTGTTGAGTCTTCTTGTATATATTCAAACCCTTACCTATTCAAAAAAAAAGAAGTGGTTTTTGCCTTACATACCTTGTTAGTGTATTACCATGATCAATTACTCCGTTGCAGCTTCAATCTACCAGAATGACGATAATAACACTAACATAAGCAGCAAATCAAGAAGCTCGGCCAGTCACTCAATATGACAAACATTTGACAAGTGACAAGCTCACTAAATTCTCAATTTATGACATACTTCATATCTAAGCTTTCTTGTCAAAATTAACAGCTCAACCGCTTACTACGAGACCATCTACCTTCCTCCAATCATATAACAACCAAAACAACCATCCATGCATATCAATTACTGCAAGTTAGTTTATTGAAAAGGGAAAAACTGCTTCCGATCACCACCCCGTGAGTCGAGCTTGTAAACTATACTTAAAAGGCCATTAGAATCTCTTGTATGTTGGTAGAAGAACATTCATACCTCACTTAGAAAGTTCAGCAAAGAACATACTGAACCTTCGAGAAACAACATGGGTAAGGATGATTCATGAGCTAGGATGAAGACTTTCACTTGATTCCGTGGAAAATTCACTTGGCTTGAACTTAGGTGGTGTGGAGGACAAAATCTCTTGAGAGACGGTCCAAAACGTGAAAGAACAAATGCCAAATGAAATCCTAAGCCCTAACTTATAAAACAAAAGTTTTGGCTGCCATACCCTTGGGTGCCATGTGTTCCACATGCAATTAGGGTCTGCGCAGGTCTTTAGTAAAGTATGCATAACTTCTTGTAATGAAGTCAGATTGACGAGTGGTCTGTCTCATGGGAAACTAGATCACATAACTCCTCACAGTCTAGGAGATATACTCGTTCAGAGTTGACCCTTTCGCGGCACGTAAAGGATAAACCATTCGTAGTCGCTTTTGGCTTGACTTAAACAATAAATCTTTATGAATCTGTAACCTTGTATCACCATAATAGACTGACCCTTAACTTATATACTCATTCTTGACCGTCCCGTGGTTGGACCAATTCATTGATGTTAGACTAGTCGTACTTGAACTTATAGGCACAGGGTATAACAGTTAACCCTGAGTATGTACTAGTGGGAGATAGCAGGTATCTGGACTAGTCGAGGTGCATGCAAATTCGACTCCACACCATCGTTATAAACAGATAATATACCTAATTGCACCTAGTAATCAATATAGAACGTTTGGCAAAATGCTGCAGTGCAGCACAGGTTTTTGCTTGGTCTTTGTAATTCTGAGGTTAAAGAGACTATTGAGACCCTGTTTTGTTTTATGTTGTATTTTGGAATAATGGTTTGGGAGCTTGCTAAACTTCAGGTCATTTTTTCATGGGGAAACAGTTGTGGTTATTTTACCCATTTGAGCTGCACACCTCCAGGAGGGATGCTCAAGTGTGCTCTCGAAGAGCAGCCCTCCACAGAAATCTTAGTGATTCTAGTTGTTCACTAATATGAACCTCATGGAGTATAGTTGTTCTTATTGTAAACTTTGAGGTCATAAGACCAAAATTACTCTTTTCATAGCACATGAATTAACATTGTTCTTTCTCCCATTGTTGGTATTAATATTCATTTGTGCAACACACATCAATCCCGGAACTTATTCCTGCTTCTTACTAAGGGGGTAATATTTGTAACGCTTTGTTCTCAAATTCAGGTTGTTGGTTGCCTTATTGAGCATGATAAGAAGATATTAATGTGCAGGCGCAAAATTCACCCATCATATGGACTTTGGTATGTGTCTACCAACAGAGTTTAGTGAGAAGGGAGGACTTCCTTCCACAACCTCTAAGAAAGTTCTCTATTAGTACCCAGAATTCAGAAATGTAGAGAGTACTGAAGTAATTCGAATTCCAGTATAGTAAAGTTTATCTTCAAATAATGTTGTACTGGTAGGACGCTCCCAGCTGGCTATATGGAGATTGGTGAATCTGCTGCTGAGGGAGCAATTAGGGAAACCTGGGAAGAGGCAAATGCAGAAGTAGAGGTTCAATCACTTTTTGCTCAATTGGACATCCCTCTTATAGGACAAGTTAGTATAAATTCTTGAAGATGGCATTTACCTCCTATGAATTATGACCGATATTGGTGATAATTATTTTTTCCTCATCTTTGCAGACGTACATGATTTTTTTGGCAAAACTGAAAAATCCCCACTTTTCACCTGGTCCAGAATCATCAGAATGTCAGCTTTTTGAACTTGATGATATTCCTTTTGATTCTTTAGCATTTTCATCAATGCTAGTAAGCTTGAATCT</genome_strand>
        <mrna_strand>GGGGGAGCTGTTACCCAGAAAAAATAATGCTCACTGTAAAACAGATTGTGGGTTCATCTTCTGGGTTTGCTTCCTATAGATTTAGAAAGCCTCAACCCAATTCTGCCTTCTCCTTAATTTCGAGAAAACCCATTCTCACAACATCTGAAACTTTGTTATTTCCGGCTTCTCAACTACATAGTCACAAGTCCTGTTTTAGAGATTTTCGAATGTCTTCAACTCATTCAAAGTCATCCTCTTCTTCATCTGTTGCAGTCCAGTCAACT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAAACATTCGCAAGATCAACTTCTGCCAGTTTTGCGGGGGCCCAAATAAGCATGAGATACCTGATGGTGAAGAAAAGGTGAGAGCTATCTGCACTCATTGTGGGAAGATTACATATGAGAATCCAAAAATG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTTGGTTGCCTTATTGAGCATGATAAGAAGATATTAATGTGCAGGCGCAAAATTCACCCATCATATGGACTTTG..................................................................................................................................................................GACGCTCCCAGCTGGCTATATGGAGATTGGTGAATCTGCTGCTGAGGGAGCAATTAGGGAAACCTGGGAAGAGGCAAATGCAGAAGTAGAGGTTCAATCACTTTTTGCTCAATTGGACATCCCTCTTATAGGACAA......................................................................................ACGTACATGATTTTTTTGGCAAAACTGAAAAATCCCCACTTTTCACCTGGTCCAGAATCATCAGAATGTCAGCTTTTTGAACTTGATGATATTCCTTTTGATTCTTTAGCATTTTCATCAATGCTAGTAAGCTTGAATCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E540503" ref_strand="+" ref_description="SGN-E540503 [TUS-60-M24]">
      <seq>ttgctatgtggggagctgttacccagaaaaaataatgctcaaagctatacagattgtgggttcatcttctgggtttgcttcctatagatttagaaagcctcaacccaattctgccttctccttaatttcgagaaaacccattctcacaacatctgaaactttgttattgccggcttctcaactacatagtcacaagtcctgttttagagattttcgaatgtcttcaactcattcaaagtcatcctcttcttcatctgttgcagtccagtcaactggaaacattcgcaagatcaacttctgccagttttgcgggggcccaaataagcatgagatacctgatggtgaagaaaaggtgagagctatctgcactcattgtgggaagattacatatgagaatccaaaaatggttgttggttgccttattgagcatgataagaagatattaatgtgcaggcgcaaaattcacccatcatatggactttggacgctcccagctggctatatggagattggtgaatctgctgctgagggagcaattagggaaacctgggaagaggcaaatgcagaagtagaggttcaatcactttttgctcaattggacatccctcttataggacaaacgtacatgatttttttggcaaaactgaaaaatccccacttttcacctggtccagaatcatcagaatgtcagctttttgaacttgatgatattcctttttgatctttagcattttcatcaatgctagtaagcttga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C03HBa0013A17.1" temp_strand="-" temp_description="C03HBa0013A17.1  AC238559.1 htgs_phase:2 submitted_to_sgn_as:gi|261249975|gb|AC238559.1| upload_account_name:jianfeng-ren Solanum lycopersicum chromosome 3 clone C03HBa0013a17, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces">
        <position start="91616" stop="82406"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91316" g_stop="91043" g_length="274"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="274" r_length="274" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91042" i_stop="86055" i_length="4988">
            <donor d_prob="0.902" d_score="1.00"/>
            <acceptor a_prob="0.900" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="86054" g_stop="85923" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="275" r_stop="406" r_length="132" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="85922" i_stop="83303" i_length="2620">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.954" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="83302" g_stop="83226" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="407" r_stop="483" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="83225" i_stop="83064" i_length="162">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="83063" g_stop="82928" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="484" r_stop="619" r_length="136" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="82927" i_stop="82842" i_length="86">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="82841" g_stop="82706" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="620" r_stop="755" r_length="136" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C03HBa0013A17.1" gen_strand="-" ref_id="SGN-E540503" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>755</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C03HBa0013A17.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E540503" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91316" e_stop="91043"/>
          <exon e_start="86054" e_stop="85923"/>
          <exon e_start="83302" e_stop="83226"/>
          <exon e_start="83063" e_stop="82928"/>
          <exon e_start="82841" e_stop="82706"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGCTATGTGGGGAGCTGTTACCCAGAAAAAATAATGCTCAAAGCTATACAGATTGTGGGTTCATCTTCTGGGTTTGCTTCCTATAGATTTAGAAAGCCTCAACCCAATTCTGCCTTCTCCTTAATTTCGAGAAAACCCATTCTCACAACATCTGAAACTTTGTTATTGCCGGCTTCTCAACTACATAGTCACAAGTCCTGTTTTAGAGATTTTCGAATGTCTTCAACTCATTCAAAGTCATCCTCTTCTTCATCTGTTGCAGTCCAGTCAACTGTGAGTTGTTGTTGTTACACCTGTGCATTTCTTTTGATTTACTGAAATTGATGTCTCTAAAGTGTTTGATTTTGTAATTTCTGGTGCCATTTTGCTGGACTGATTGTTGAGGAGGTTGCATATTGGAATGGAATTTGATTACTTGAACTAAAACTATTTGTTTGGGTAGGTATGAATCAATCACAAATAACATAAGTGAAATAGAGGGTGAAGTAGATAGTTTAGTTGATTTCATAGGACAATTTCAGAGCCACCTATCTAGACTTTGATCTTGATGATGCCCTCTGGGGTTGTAAAACCCACCCATCAGCTTTTACTTGATGTTTTTTTTTTTTTTGGTGTGAATACATAGTTACCATTATCAAAAAAGAAATAATCCTATATTCAATCATGAATCATCTATGCTCCAGTCCAGTGCCTTAATTTTAGGTTAGAAATTCTTGGCTTATCTAGAGTGCCAGATGTTATATTTAACATTTTTGGATTTCACGAATACCCTTTCACAGATATATGTTGGAATTTGAATGGATTGTGCACCTCTTTTGATGGTTGTTGATTTACTGAAAGAGATGACTGAAGGTGCTGGATTGTGCCATTTCTAGTTCCATTTTCTTTGTCTGTTGTTGGTTGTTCATTCTTTTTGTCTGAGCCCTGAGGTTATGTCTTGGCACATCGAATGAGATTCAAAGTGGTGTTTGACAAAGATAAGCACAGGTTTAACGCTATTTTGGACACTTTTGTTAAATAAACACAAGGTTGATTGAACTAGAATGTTTTCTATTTGACCCTTCAAGGTGGCCCAATGGTTTGCGCTTGGGACTTCCATGTTGGAGGCCTCAAGTTCGGAACCCCTTGCCAGCAAAAGCAAGGGGTTTGCCTTCTGGGTCGAGCTCCTGGTGCGGGTTACCTTTCCTATATGGTTTGCGAGCTATTGCATAGGAGCGGGGGTTTTACCCTGTGCGCACCCAAAGTGTAGCGACTGCGGGTTTCCCTTGCCATAAAAAAAAAGAATGTTTTATTTGTTTTTGTGTTAAGCATTTAGCTATTTTACCTCTTACGCAACAATTTTTGTATAAAATGAAGCCTCTGCGTTTAAAGCCTAACTAAATTATCTTTACTCATCGGGCTTTTGATGCATGCCGATAAACCATATTTGATGACCCATTTTTATTCTCTTTCTATCATTTTCTGCAAATAAATTTTGCATATATTCTGTTCATTGAAACTGCTAAATGAAAGTACGGACTAAGAAGATCAGGTATTGAATTAAAAGATGCTTTCTCTCTCTCTCCTTTGTCCTTCGCTATATTCTTGTTGACCTCATTTCCAATGCAACCTTGTTTCCATCTTATTTTCTAGCTAGCTCAATCTTGTTTACTTTATATTCTCCACATCTTGCTTAATAATCAAGTGCCTACTTTGATTTGTTGCTCAAACATTACCAAATGTAGGTGTTAACACCCTTTTAGTCTGCCAATGGTCTACACATGGAATATTTAAGGAAATTTGGAAGTAGAATTCATCAGCTTATAAGTTATTTATTTTTATTTCTGTCCAGCAGTGTTTTTAGTAGATTATTACAGCTTTTTAGTTATTTATTATCCCTATTTCTAAGTAGCAGTTGTTGCAGTAAGGAGGTTATTACTCCACTTTCTCATTTAGTTGTAGTAGGCAGTTTTAGTAGACAGCAGACAATTATTTTCCCTGTTTCAGTGTTGTATTTAATGTATTTGAATTCAGTGAAATAATAAGCAGAAAATAAGTCAAGTTTTTGAGTACTTCAAACTCAAGAGATCGCAGGTTCTCTCTTAACGAACCAGCACCATAAGTCGTAGGAAGAGAACTTCAGATTTCATATTCCAGCGTCCCATAACGAGATCCATAACAGGGACCATAACAGTAGGCCTGATATCAAATCTTCAATTTAAAGCTGCTTTATCTTCTGCTACGTTTGAGCAAAACTAACATCATAAGTCCAAAGCCATATATTCTGCTGTAAAATGCCTTTGTTGGAAGTAGTAAACATCACCTTTCCACCCATGTATTAATTTTTTCTGATGATACACCTCTGGCTTGCCCGAATCCCCCCTCCCCCCCCCCCCCTTCCCTTGTGCCATTGCTTCCACACATGACTCTTCATTTCTTGGATCCCTTTACTGGCGGAGTCATTTCCATGCACTTCTCTTCCTTATTCACTTCTTTTGCCTCATGCTATCTATCTTTATGAATAACATCGTTGCTTCCTCTTTGCACCCTTTGATATCTATCGAACTCTTCGGCGAATAAGATGATGTTCTGATGTATCCATATAGGGACATCAAAGTTTGGATCTTCTCTTCCCCCCCGGGGTATGTTGGCTCAAAGGTATTGCATCTCGAATGTTGTCAAGCTGGAATTGTTTTCTTCACTTTTCAGCATAGCGGATTCTTGCATACCACTATCTTCCCAAGGTTGAGGGATTTCAGAAATTTCTGGATTCTTTACTATCGCTTCCTCTTCTTCACTCTTTTCATGAGTTGGAAAGATTGGCTTCAAGTTCGACAGATATTGGGTCAATTAAATTAGAGGAAGAGTCATTCACTAGCCCATTTGAGATGAACTGCACCAGCAGATCTGGGCCCAAACTTTTCCTTCTAATCATAGGCCTCTTTCTCTTGATTGGGGTGGAAAGTGGGACCTCAGTCACGTGTGCCTTGTCACTTGCTGGCACATTGACCAGTTCATCACTTCAGGGTGGTCGGAGGAACCCATGTGCCCTGCCACCTTTGTAAAGCCTAAAAGGCTTTCATGTTCTAATCCACCAGTTCCTTCGTCAAACCTCTTGATCTTTGGATGTTCTTTGCTGCGTGCACCGTAAACCACCCTCGCCGGCGTCGCAACCCAGATTCGGACTTTCAAGGTTAAATGTTAGTGGACCAGCTCCACCGAGTTCGGAACAGAGACTCTGTCTCCTCTGACCTTCATCCTTGCCCATTTGAGGTGATTTCATAACTCAGTTTCTTCTTCAGTTCTAATCCAGCCTCCACATAAGTTTCCTACCTCACGGAAAATTTTTTGGGACCAAAGTTGGAGGAGCAAACCTACTACTCTGATACAGACCTGGTTCGGCCTATCATGGATGGAAGTCAATGTCAGCAACCACCACTGTAGGTTGAACTTGTAGGATTTCCACCACTTCCCTCTTACAATGTGGTCTGCAGCTGGTTTGTTGGGAAACTCAAAGAGGAAACGATTGTGCCCCAAATCGTAGATGTTGATTCCATGCTTGTGCTTCCAAGTGCTTGCCACCCACCGTCAAATCTCTGATAGAAAGGCATCTGGAAATTGGAATCTCCTCTGGGGGACATCCAACCACACCTTTTGCTAGTAGTTCATTTTGATTTGTTGTTGTCGAATCTGTAATAAAGATCAATTTCCTTTTTTTGTTGAATCTTGTAGCATTTATTCTATTGTACACCATTTATTGTTTCTGACATGTGAATAGAAGAGACCCTCTTCTGTTTTCCTGTGCAACATCTTAACTGCCTTCTGGGCCTTAGCGTTTATGAAATTCATTATTTTGGTAGCTATGCCTATCCATCCTGGGTTTAGTGACTACTCGGGGATGATGATGACAACTCTTCTCTTACCCTGCATATTTGAAATGCTAACTTATTGACCATATTTGTTATAATTCCTTGAGCAGAAGAACTCTGTGAACTGGTCCCGAAACTTCCATCTATGGACTGAATTTCCGTATGCTTCTTTAAGAGCAAATGCTAGCCGCTCATCGTCTTGTAGATAGTACTATCGTGTTCATCATGTTACAACCTCGTTCTGCCCAGTCTTACCATGTTTCAGCCCTAGAAACTACTTTGGTAATATCGTAAGATTTGAATCCTACAGCAAAATAAATGGTATAGTCCTCCATGGTTGTAACAAAGAAAAAAAGGTTGGAGAGGACTTGGGTTGAGGGAGGTTCTAGCAATGGAAGATTGCCGGAAAAGGGATTCTAGGGGCCCAGAAGAGAGCTGCAAAAGTTTCCTCGGGTAATGTGCCTGGTAGCATTTTGACTGGAAGTGATTTAATCTCTTTAATGATCCCTTTTATTATCAATTTTCCATAAGAAAAATATTATAAAGCAACAAGCATACATTTCCCAAAAAAGTCCTGCAAAAACTTTGATGTGAATATACCATCTGATGAAAAATACCTAATCACATCCTAACATCAACCTAGCGGTCAAAACATGCGCACTTGTCCAAAATGGAAGGCAATATGCAATCAGAAATAAATGGAAGTGGCTTCTTATTGCACATAGCATTCTTCTAAATGCTGGCATGCCTATGATTCTAGGTATCTGATATAGAATTGGCTGTACAAGTTGAAAACAACCAAAATCTGTTACGAACTGAGGCATTCAACTGGAGTTTCTCTCTCCTCTTCTCTCCAGCCTTATCTTTCGTTTCTCTTCCTACAAAGAGTTTTTTCATGCCAGTTGTGAAGAATAATGAACCTTGAGCTTGTCAACCCAAAGGTTAGCTTATATGTGAGGATTTCCCAACATCATATAAGGACATGAGAGCTCATTTCTTCAATCAACACAAACACTCTTAACACCCCACCCTGCACATCCAAGGGCTGGACATTTGAAGTATGACTAAATAACATGGGGGTCCAACAATATATAAACCAAGAATAGGAATGAGTCCGATGCTAATACCATTTGAAGGAAAATGAACTCTGGGCATGCTAATACCATTTGAAGAAAATGAACTTTGGGCATAACTCAACTCCAAAAGCTAGTTCATGAGGTGAGACATGCCCAACGTCATGTAAGGTTACAGCAAACCCTCTCTCCACTAATGCGAGATACTGTTACCACCAGCCAATTTTTTTAAAATTCACCTTTATGTTATTTAAATAGATCTGAGAGCATTTTGTGTTTCATAAATTGTTCAGGTTCCTTTATCTTTTCCTTGATTGATTTCAGTTCAAAGATTTTGCAGGGAAACATTCGCAAGATCAACTTCTGCCAGTTTTGCGGGGGCCCAAATAAGCATGAGATACCTGATGGTGAAGAAAAGGTGAGAGCTATCTGCACTCATTGTGGGAAGATTACATATGAGAATCCAAAAATGGTAAGATTTTCATTAAGCTTCACTGTTCCGCTTGTATTCTTGATTAAATGCAGATTAATCATTGTATTCTTTCTCAAAAAAAAAAAAAACTCATTGTATTACCTCTTGCAATCGTAATGACCACATTATTTTCCTTTGTCTTTTCAGTGCCTACATGTTTGGTGGTCAAATTTCAGTATTAATGATGTGGGAATATTCATTTTTGTTTAGAACCAGCTATAATCACCCAGCCAAATCAATTTGGTGACAGTGGTTCAATTCGATGGTTTGAATTTTGTTTATGATTTTATTTTTGGTTTCATATGGGGGACAGTTTCAAATATGTATACACCTAATCATATCGAAAGGTGTAGTACAGTGGTCATTGAGGTGAGTACAAATCTAAGAGATCAGGGTTCAAATCCCCGTTGAGACAAAAGAAGAACACTAGATTATTTCTTCTCTATCTGCCTAAGATTTGGAAGTTTGCCACATAATGTACTATGCTTCTTTTAGTAGACCTCTTTAAGGTCATGGTACATCTTCGTGGAACCAGGATGAATAGAATACCATGGGCAAGGTGCTTCACTCATAATGTTCTCTTGAAGCGCTTCATTATCGGGAACATATAATCTGTCTTGGCAGCTTAAGGTGCCATCTCCTGCGAGCTTAAATCCTGTGACTTCTACGTTGGCGGATCCTCTCTTTATACTGAAGTAACAAGGGGTCATCACACTTCTTCTCTTTCACTGTTGCCGTTAAGGATGACGTTGTAGTATACTGGACAACTACTTCACCATCTTCAGAGTCCATGAGTCGGACTCCAAAGCTTGCTAATCCTATGTGCTAAACTCCCCATATACAGTTGGGATTTGATAAATATGATAGACAATACTTTGTTTGTTTATTCATAGTCTCCCCCTACTTTTGCTCTCATGAATCTTAGATTATAATTACCTTTTGGTGTTGAGTCTTCTTGTATATATTCAAACCCTTACCTATTCAAAAAAAAAGAAGTGGTTTTTGCCTTACATACCTTGTTAGTGTATTACCATGATCAATTACTCCGTTGCAGCTTCAATCTACCAGAATGACGATAATAACACTAACATAAGCAGCAAATCAAGAAGCTCGGCCAGTCACTCAATATGACAAACATTTGACAAGTGACAAGCTCACTAAATTCTCAATTTATGACATACTTCATATCTAAGCTTTCTTGTCAAAATTAACAGCTCAACCGCTTACTACGAGACCATCTACCTTCCTCCAATCATATAACAACCAAAACAACCATCCATGCATATCAATTACTGCAAGTTAGTTTATTGAAAAGGGAAAAACTGCTTCCGATCACCACCCCGTGAGTCGAGCTTGTAAACTATACTTAAAAGGCCATTAGAATCTCTTGTATGTTGGTAGAAGAACATTCATACCTCACTTAGAAAGTTCAGCAAAGAACATACTGAACCTTCGAGAAACAACATGGGTAAGGATGATTCATGAGCTAGGATGAAGACTTTCACTTGATTCCGTGGAAAATTCACTTGGCTTGAACTTAGGTGGTGTGGAGGACAAAATCTCTTGAGAGACGGTCCAAAACGTGAAAGAACAAATGCCAAATGAAATCCTAAGCCCTAACTTATAAAACAAAAGTTTTGGCTGCCATACCCTTGGGTGCCATGTGTTCCACATGCAATTAGGGTCTGCGCAGGTCTTTAGTAAAGTATGCATAACTTCTTGTAATGAAGTCAGATTGACGAGTGGTCTGTCTCATGGGAAACTAGATCACATAACTCCTCACAGTCTAGGAGATATACTCGTTCAGAGTTGACCCTTTCGCGGCACGTAAAGGATAAACCATTCGTAGTCGCTTTTGGCTTGACTTAAACAATAAATCTTTATGAATCTGTAACCTTGTATCACCATAATAGACTGACCCTTAACTTATATACTCATTCTTGACCGTCCCGTGGTTGGACCAATTCATTGATGTTAGACTAGTCGTACTTGAACTTATAGGCACAGGGTATAACAGTTAACCCTGAGTATGTACTAGTGGGAGATAGCAGGTATCTGGACTAGTCGAGGTGCATGCAAATTCGACTCCACACCATCGTTATAAACAGATAATATACCTAATTGCACCTAGTAATCAATATAGAACGTTTGGCAAAATGCTGCAGTGCAGCACAGGTTTTTGCTTGGTCTTTGTAATTCTGAGGTTAAAGAGACTATTGAGACCCTGTTTTGTTTTATGTTGTATTTTGGAATAATGGTTTGGGAGCTTGCTAAACTTCAGGTCATTTTTTCATGGGGAAACAGTTGTGGTTATTTTACCCATTTGAGCTGCACACCTCCAGGAGGGATGCTCAAGTGTGCTCTCGAAGAGCAGCCCTCCACAGAAATCTTAGTGATTCTAGTTGTTCACTAATATGAACCTCATGGAGTATAGTTGTTCTTATTGTAAACTTTGAGGTCATAAGACCAAAATTACTCTTTTCATAGCACATGAATTAACATTGTTCTTTCTCCCATTGTTGGTATTAATATTCATTTGTGCAACACACATCAATCCCGGAACTTATTCCTGCTTCTTACTAAGGGGGTAATATTTGTAACGCTTTGTTCTCAAATTCAGGTTGTTGGTTGCCTTATTGAGCATGATAAGAAGATATTAATGTGCAGGCGCAAAATTCACCCATCATATGGACTTTGGTATGTGTCTACCAACAGAGTTTAGTGAGAAGGGAGGACTTCCTTCCACAACCTCTAAGAAAGTTCTCTATTAGTACCCAGAATTCAGAAATGTAGAGAGTACTGAAGTAATTCGAATTCCAGTATAGTAAAGTTTATCTTCAAATAATGTTGTACTGGTAGGACGCTCCCAGCTGGCTATATGGAGATTGGTGAATCTGCTGCTGAGGGAGCAATTAGGGAAACCTGGGAAGAGGCAAATGCAGAAGTAGAGGTTCAATCACTTTTTGCTCAATTGGACATCCCTCTTATAGGACAAGTTAGTATAAATTCTTGAAGATGGCATTTACCTCCTATGAATTATGACCGATATTGGTGATAATTATTTTTTCCTCATCTTTGCAGACGTACATGATTTTTTTGGCAAAACTGAAAAATCCCCACTTTTCACCTGGTCCAGAATCATCAGAATGTCAGCTTTTTGAACTTGATGATATTCCTTTTGATTCTTTAGCATTTTCATCAATGCTAGTAAGCTTGA</genome_strand>
        <mrna_strand>TTGCTATGTGGGGAGCTGTTACCCAGAAAAAATAATGCTCAAAGCTATACAGATTGTGGGTTCATCTTCTGGGTTTGCTTCCTATAGATTTAGAAAGCCTCAACCCAATTCTGCCTTCTCCTTAATTTCGAGAAAACCCATTCTCACAACATCTGAAACTTTGTTATTGCCGGCTTCTCAACTACATAGTCACAAGTCCTGTTTTAGAGATTTTCGAATGTCTTCAACTCATTCAAAGTCATCCTCTTCTTCATCTGTTGCAGTCCAGTCAACT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAAACATTCGCAAGATCAACTTCTGCCAGTTTTGCGGGGGCCCAAATAAGCATGAGATACCTGATGGTGAAGAAAAGGTGAGAGCTATCTGCACTCATTGTGGGAAGATTACATATGAGAATCCAAAAATG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTTGGTTGCCTTATTGAGCATGATAAGAAGATATTAATGTGCAGGCGCAAAATTCACCCATCATATGGACTTTG..................................................................................................................................................................GACGCTCCCAGCTGGCTATATGGAGATTGGTGAATCTGCTGCTGAGGGAGCAATTAGGGAAACCTGGGAAGAGGCAAATGCAGAAGTAGAGGTTCAATCACTTTTTGCTCAATTGGACATCCCTCTTATAGGACAA......................................................................................ACGTACATGATTTTTTTGGCAAAACTGAAAAATCCCCACTTTTCACCTGGTCCAGAATCATCAGAATGTCAGCTTTTTGAACTTGATGATATTCCTTTTTGATCTTTAGCATTTTCATCAATGCTAGTAAGCTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E233533" ref_strand="+" ref_description="SGN-E233533 [cLED-9-I2]">
      <seq>gactttggacgctcccagctggctatatggagattggtgaatctgctgctgagggagcaattagggaaacctgggaagaggcaaatgcagaagtagaggttcaatcactttttgctcaattggacatccctcttataggacaaacgtacatgatttttttggcaaaactgaaaaatccccacttttcacctggtccagaatcatcagaatgtcagctttttgaacttgatgatattccttttgattctttagcattttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C03HBa0013A17.1" temp_strand="-" temp_description="C03HBa0013A17.1  AC238559.1 htgs_phase:2 submitted_to_sgn_as:gi|261249975|gb|AC238559.1| upload_account_name:jianfeng-ren Solanum lycopersicum chromosome 3 clone C03HBa0013a17, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces">
        <position start="83366" stop="82426"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83232" g_stop="83226" g_length="7"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="7" r_length="7" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="83225" i_stop="83064" i_length="162">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="83063" g_stop="82928" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="8" r_stop="143" r_length="136" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="82927" i_stop="82842" i_length="86">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="82841" g_stop="82726" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="144" r_stop="259" r_length="116" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C03HBa0013A17.1" gen_strand="-" ref_id="SGN-E233533" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>259</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C03HBa0013A17.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E233533" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83232" e_stop="83226"/>
          <exon e_start="83063" e_stop="82928"/>
          <exon e_start="82841" e_stop="82726"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACTTTGGTATGTGTCTACCAACAGAGTTTAGTGAGAAGGGAGGACTTCCTTCCACAACCTCTAAGAAAGTTCTCTATTAGTACCCAGAATTCAGAAATGTAGAGAGTACTGAAGTAATTCGAATTCCAGTATAGTAAAGTTTATCTTCAAATAATGTTGTACTGGTAGGACGCTCCCAGCTGGCTATATGGAGATTGGTGAATCTGCTGCTGAGGGAGCAATTAGGGAAACCTGGGAAGAGGCAAATGCAGAAGTAGAGGTTCAATCACTTTTTGCTCAATTGGACATCCCTCTTATAGGACAAGTTAGTATAAATTCTTGAAGATGGCATTTACCTCCTATGAATTATGACCGATATTGGTGATAATTATTTTTTCCTCATCTTTGCAGACGTACATGATTTTTTTGGCAAAACTGAAAAATCCCCACTTTTCACCTGGTCCAGAATCATCAGAATGTCAGCTTTTTGAACTTGATGATATTCCTTTTGATTCTTTAGCATTTTC</genome_strand>
        <mrna_strand>GACTTTG..................................................................................................................................................................GACGCTCCCAGCTGGCTATATGGAGATTGGTGAATCTGCTGCTGAGGGAGCAATTAGGGAAACCTGGGAAGAGGCAAATGCAGAAGTAGAGGTTCAATCACTTTTTGCTCAATTGGACATCCCTCTTATAGGACAA......................................................................................ACGTACATGATTTTTTTGGCAAAACTGAAAAATCCCCACTTTTCACCTGGTCCAGAATCATCAGAATGTCAGCTTTTTGAACTTGATGATATTCCTTTTGATTCTTTAGCATTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E289223" ref_strand="+" ref_description="SGN-E289223 [cLES-18-G9]">
      <seq>tgctatgtggggagctgttacccagaaaaaataatgctcaaagctatacagattgtgggttcatcttctgggtttgcttcctatagatttagaaagcctcaacccaattctgccttctccttaatttcgagaaaacccattctcacaacatctgaaactttgttattgccggcttctcaactacatagtcacaagtcctgttttagagattttcgaatgtcttcaactcattcaaagtcatcctcttcttcatctgttgcagtccagtcaactggaaacattcgcaagatcaacttctgccagttttgcgggggcccaaataagcatgagatacctgatggtgaagaaaaggtgagagctatctgcactcattgtgggaagattacatatgagaatccaaaaatggttgttggttgccttattgagcatgataagaagatattaatgtgcaggcgcaaaattcacccatcatatggactttggacgctcccagctggctatatggagattggtgaatctgctgctgagggagca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C03HBa0013A17.1" temp_strand="-" temp_description="C03HBa0013A17.1  AC238559.1 htgs_phase:2 submitted_to_sgn_as:gi|261249975|gb|AC238559.1| upload_account_name:jianfeng-ren Solanum lycopersicum chromosome 3 clone C03HBa0013a17, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces">
        <position start="91615" stop="82712"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91315" g_stop="91043" g_length="273"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="273" r_length="273" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91042" i_stop="86055" i_length="4988">
            <donor d_prob="0.902" d_score="1.00"/>
            <acceptor a_prob="0.900" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="86054" g_stop="85923" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="274" r_stop="405" r_length="132" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="85922" i_stop="83303" i_length="2620">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.954" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="83302" g_stop="83226" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="406" r_stop="482" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="83225" i_stop="83064" i_length="162">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="83063" g_stop="83012" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="483" r_stop="534" r_length="52" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C03HBa0013A17.1" gen_strand="-" ref_id="SGN-E289223" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>534</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C03HBa0013A17.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E289223" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91315" e_stop="91043"/>
          <exon e_start="86054" e_stop="85923"/>
          <exon e_start="83302" e_stop="83226"/>
          <exon e_start="83063" e_stop="83012"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCTATGTGGGGAGCTGTTACCCAGAAAAAATAATGCTCAAAGCTATACAGATTGTGGGTTCATCTTCTGGGTTTGCTTCCTATAGATTTAGAAAGCCTCAACCCAATTCTGCCTTCTCCTTAATTTCGAGAAAACCCATTCTCACAACATCTGAAACTTTGTTATTGCCGGCTTCTCAACTACATAGTCACAAGTCCTGTTTTAGAGATTTTCGAATGTCTTCAACTCATTCAAAGTCATCCTCTTCTTCATCTGTTGCAGTCCAGTCAACTGTGAGTTGTTGTTGTTACACCTGTGCATTTCTTTTGATTTACTGAAATTGATGTCTCTAAAGTGTTTGATTTTGTAATTTCTGGTGCCATTTTGCTGGACTGATTGTTGAGGAGGTTGCATATTGGAATGGAATTTGATTACTTGAACTAAAACTATTTGTTTGGGTAGGTATGAATCAATCACAAATAACATAAGTGAAATAGAGGGTGAAGTAGATAGTTTAGTTGATTTCATAGGACAATTTCAGAGCCACCTATCTAGACTTTGATCTTGATGATGCCCTCTGGGGTTGTAAAACCCACCCATCAGCTTTTACTTGATGTTTTTTTTTTTTTTGGTGTGAATACATAGTTACCATTATCAAAAAAGAAATAATCCTATATTCAATCATGAATCATCTATGCTCCAGTCCAGTGCCTTAATTTTAGGTTAGAAATTCTTGGCTTATCTAGAGTGCCAGATGTTATATTTAACATTTTTGGATTTCACGAATACCCTTTCACAGATATATGTTGGAATTTGAATGGATTGTGCACCTCTTTTGATGGTTGTTGATTTACTGAAAGAGATGACTGAAGGTGCTGGATTGTGCCATTTCTAGTTCCATTTTCTTTGTCTGTTGTTGGTTGTTCATTCTTTTTGTCTGAGCCCTGAGGTTATGTCTTGGCACATCGAATGAGATTCAAAGTGGTGTTTGACAAAGATAAGCACAGGTTTAACGCTATTTTGGACACTTTTGTTAAATAAACACAAGGTTGATTGAACTAGAATGTTTTCTATTTGACCCTTCAAGGTGGCCCAATGGTTTGCGCTTGGGACTTCCATGTTGGAGGCCTCAAGTTCGGAACCCCTTGCCAGCAAAAGCAAGGGGTTTGCCTTCTGGGTCGAGCTCCTGGTGCGGGTTACCTTTCCTATATGGTTTGCGAGCTATTGCATAGGAGCGGGGGTTTTACCCTGTGCGCACCCAAAGTGTAGCGACTGCGGGTTTCCCTTGCCATAAAAAAAAAGAATGTTTTATTTGTTTTTGTGTTAAGCATTTAGCTATTTTACCTCTTACGCAACAATTTTTGTATAAAATGAAGCCTCTGCGTTTAAAGCCTAACTAAATTATCTTTACTCATCGGGCTTTTGATGCATGCCGATAAACCATATTTGATGACCCATTTTTATTCTCTTTCTATCATTTTCTGCAAATAAATTTTGCATATATTCTGTTCATTGAAACTGCTAAATGAAAGTACGGACTAAGAAGATCAGGTATTGAATTAAAAGATGCTTTCTCTCTCTCTCCTTTGTCCTTCGCTATATTCTTGTTGACCTCATTTCCAATGCAACCTTGTTTCCATCTTATTTTCTAGCTAGCTCAATCTTGTTTACTTTATATTCTCCACATCTTGCTTAATAATCAAGTGCCTACTTTGATTTGTTGCTCAAACATTACCAAATGTAGGTGTTAACACCCTTTTAGTCTGCCAATGGTCTACACATGGAATATTTAAGGAAATTTGGAAGTAGAATTCATCAGCTTATAAGTTATTTATTTTTATTTCTGTCCAGCAGTGTTTTTAGTAGATTATTACAGCTTTTTAGTTATTTATTATCCCTATTTCTAAGTAGCAGTTGTTGCAGTAAGGAGGTTATTACTCCACTTTCTCATTTAGTTGTAGTAGGCAGTTTTAGTAGACAGCAGACAATTATTTTCCCTGTTTCAGTGTTGTATTTAATGTATTTGAATTCAGTGAAATAATAAGCAGAAAATAAGTCAAGTTTTTGAGTACTTCAAACTCAAGAGATCGCAGGTTCTCTCTTAACGAACCAGCACCATAAGTCGTAGGAAGAGAACTTCAGATTTCATATTCCAGCGTCCCATAACGAGATCCATAACAGGGACCATAACAGTAGGCCTGATATCAAATCTTCAATTTAAAGCTGCTTTATCTTCTGCTACGTTTGAGCAAAACTAACATCATAAGTCCAAAGCCATATATTCTGCTGTAAAATGCCTTTGTTGGAAGTAGTAAACATCACCTTTCCACCCATGTATTAATTTTTTCTGATGATACACCTCTGGCTTGCCCGAATCCCCCCTCCCCCCCCCCCCCTTCCCTTGTGCCATTGCTTCCACACATGACTCTTCATTTCTTGGATCCCTTTACTGGCGGAGTCATTTCCATGCACTTCTCTTCCTTATTCACTTCTTTTGCCTCATGCTATCTATCTTTATGAATAACATCGTTGCTTCCTCTTTGCACCCTTTGATATCTATCGAACTCTTCGGCGAATAAGATGATGTTCTGATGTATCCATATAGGGACATCAAAGTTTGGATCTTCTCTTCCCCCCCGGGGTATGTTGGCTCAAAGGTATTGCATCTCGAATGTTGTCAAGCTGGAATTGTTTTCTTCACTTTTCAGCATAGCGGATTCTTGCATACCACTATCTTCCCAAGGTTGAGGGATTTCAGAAATTTCTGGATTCTTTACTATCGCTTCCTCTTCTTCACTCTTTTCATGAGTTGGAAAGATTGGCTTCAAGTTCGACAGATATTGGGTCAATTAAATTAGAGGAAGAGTCATTCACTAGCCCATTTGAGATGAACTGCACCAGCAGATCTGGGCCCAAACTTTTCCTTCTAATCATAGGCCTCTTTCTCTTGATTGGGGTGGAAAGTGGGACCTCAGTCACGTGTGCCTTGTCACTTGCTGGCACATTGACCAGTTCATCACTTCAGGGTGGTCGGAGGAACCCATGTGCCCTGCCACCTTTGTAAAGCCTAAAAGGCTTTCATGTTCTAATCCACCAGTTCCTTCGTCAAACCTCTTGATCTTTGGATGTTCTTTGCTGCGTGCACCGTAAACCACCCTCGCCGGCGTCGCAACCCAGATTCGGACTTTCAAGGTTAAATGTTAGTGGACCAGCTCCACCGAGTTCGGAACAGAGACTCTGTCTCCTCTGACCTTCATCCTTGCCCATTTGAGGTGATTTCATAACTCAGTTTCTTCTTCAGTTCTAATCCAGCCTCCACATAAGTTTCCTACCTCACGGAAAATTTTTTGGGACCAAAGTTGGAGGAGCAAACCTACTACTCTGATACAGACCTGGTTCGGCCTATCATGGATGGAAGTCAATGTCAGCAACCACCACTGTAGGTTGAACTTGTAGGATTTCCACCACTTCCCTCTTACAATGTGGTCTGCAGCTGGTTTGTTGGGAAACTCAAAGAGGAAACGATTGTGCCCCAAATCGTAGATGTTGATTCCATGCTTGTGCTTCCAAGTGCTTGCCACCCACCGTCAAATCTCTGATAGAAAGGCATCTGGAAATTGGAATCTCCTCTGGGGGACATCCAACCACACCTTTTGCTAGTAGTTCATTTTGATTTGTTGTTGTCGAATCTGTAATAAAGATCAATTTCCTTTTTTTGTTGAATCTTGTAGCATTTATTCTATTGTACACCATTTATTGTTTCTGACATGTGAATAGAAGAGACCCTCTTCTGTTTTCCTGTGCAACATCTTAACTGCCTTCTGGGCCTTAGCGTTTATGAAATTCATTATTTTGGTAGCTATGCCTATCCATCCTGGGTTTAGTGACTACTCGGGGATGATGATGACAACTCTTCTCTTACCCTGCATATTTGAAATGCTAACTTATTGACCATATTTGTTATAATTCCTTGAGCAGAAGAACTCTGTGAACTGGTCCCGAAACTTCCATCTATGGACTGAATTTCCGTATGCTTCTTTAAGAGCAAATGCTAGCCGCTCATCGTCTTGTAGATAGTACTATCGTGTTCATCATGTTACAACCTCGTTCTGCCCAGTCTTACCATGTTTCAGCCCTAGAAACTACTTTGGTAATATCGTAAGATTTGAATCCTACAGCAAAATAAATGGTATAGTCCTCCATGGTTGTAACAAAGAAAAAAAGGTTGGAGAGGACTTGGGTTGAGGGAGGTTCTAGCAATGGAAGATTGCCGGAAAAGGGATTCTAGGGGCCCAGAAGAGAGCTGCAAAAGTTTCCTCGGGTAATGTGCCTGGTAGCATTTTGACTGGAAGTGATTTAATCTCTTTAATGATCCCTTTTATTATCAATTTTCCATAAGAAAAATATTATAAAGCAACAAGCATACATTTCCCAAAAAAGTCCTGCAAAAACTTTGATGTGAATATACCATCTGATGAAAAATACCTAATCACATCCTAACATCAACCTAGCGGTCAAAACATGCGCACTTGTCCAAAATGGAAGGCAATATGCAATCAGAAATAAATGGAAGTGGCTTCTTATTGCACATAGCATTCTTCTAAATGCTGGCATGCCTATGATTCTAGGTATCTGATATAGAATTGGCTGTACAAGTTGAAAACAACCAAAATCTGTTACGAACTGAGGCATTCAACTGGAGTTTCTCTCTCCTCTTCTCTCCAGCCTTATCTTTCGTTTCTCTTCCTACAAAGAGTTTTTTCATGCCAGTTGTGAAGAATAATGAACCTTGAGCTTGTCAACCCAAAGGTTAGCTTATATGTGAGGATTTCCCAACATCATATAAGGACATGAGAGCTCATTTCTTCAATCAACACAAACACTCTTAACACCCCACCCTGCACATCCAAGGGCTGGACATTTGAAGTATGACTAAATAACATGGGGGTCCAACAATATATAAACCAAGAATAGGAATGAGTCCGATGCTAATACCATTTGAAGGAAAATGAACTCTGGGCATGCTAATACCATTTGAAGAAAATGAACTTTGGGCATAACTCAACTCCAAAAGCTAGTTCATGAGGTGAGACATGCCCAACGTCATGTAAGGTTACAGCAAACCCTCTCTCCACTAATGCGAGATACTGTTACCACCAGCCAATTTTTTTAAAATTCACCTTTATGTTATTTAAATAGATCTGAGAGCATTTTGTGTTTCATAAATTGTTCAGGTTCCTTTATCTTTTCCTTGATTGATTTCAGTTCAAAGATTTTGCAGGGAAACATTCGCAAGATCAACTTCTGCCAGTTTTGCGGGGGCCCAAATAAGCATGAGATACCTGATGGTGAAGAAAAGGTGAGAGCTATCTGCACTCATTGTGGGAAGATTACATATGAGAATCCAAAAATGGTAAGATTTTCATTAAGCTTCACTGTTCCGCTTGTATTCTTGATTAAATGCAGATTAATCATTGTATTCTTTCTCAAAAAAAAAAAAAACTCATTGTATTACCTCTTGCAATCGTAATGACCACATTATTTTCCTTTGTCTTTTCAGTGCCTACATGTTTGGTGGTCAAATTTCAGTATTAATGATGTGGGAATATTCATTTTTGTTTAGAACCAGCTATAATCACCCAGCCAAATCAATTTGGTGACAGTGGTTCAATTCGATGGTTTGAATTTTGTTTATGATTTTATTTTTGGTTTCATATGGGGGACAGTTTCAAATATGTATACACCTAATCATATCGAAAGGTGTAGTACAGTGGTCATTGAGGTGAGTACAAATCTAAGAGATCAGGGTTCAAATCCCCGTTGAGACAAAAGAAGAACACTAGATTATTTCTTCTCTATCTGCCTAAGATTTGGAAGTTTGCCACATAATGTACTATGCTTCTTTTAGTAGACCTCTTTAAGGTCATGGTACATCTTCGTGGAACCAGGATGAATAGAATACCATGGGCAAGGTGCTTCACTCATAATGTTCTCTTGAAGCGCTTCATTATCGGGAACATATAATCTGTCTTGGCAGCTTAAGGTGCCATCTCCTGCGAGCTTAAATCCTGTGACTTCTACGTTGGCGGATCCTCTCTTTATACTGAAGTAACAAGGGGTCATCACACTTCTTCTCTTTCACTGTTGCCGTTAAGGATGACGTTGTAGTATACTGGACAACTACTTCACCATCTTCAGAGTCCATGAGTCGGACTCCAAAGCTTGCTAATCCTATGTGCTAAACTCCCCATATACAGTTGGGATTTGATAAATATGATAGACAATACTTTGTTTGTTTATTCATAGTCTCCCCCTACTTTTGCTCTCATGAATCTTAGATTATAATTACCTTTTGGTGTTGAGTCTTCTTGTATATATTCAAACCCTTACCTATTCAAAAAAAAAGAAGTGGTTTTTGCCTTACATACCTTGTTAGTGTATTACCATGATCAATTACTCCGTTGCAGCTTCAATCTACCAGAATGACGATAATAACACTAACATAAGCAGCAAATCAAGAAGCTCGGCCAGTCACTCAATATGACAAACATTTGACAAGTGACAAGCTCACTAAATTCTCAATTTATGACATACTTCATATCTAAGCTTTCTTGTCAAAATTAACAGCTCAACCGCTTACTACGAGACCATCTACCTTCCTCCAATCATATAACAACCAAAACAACCATCCATGCATATCAATTACTGCAAGTTAGTTTATTGAAAAGGGAAAAACTGCTTCCGATCACCACCCCGTGAGTCGAGCTTGTAAACTATACTTAAAAGGCCATTAGAATCTCTTGTATGTTGGTAGAAGAACATTCATACCTCACTTAGAAAGTTCAGCAAAGAACATACTGAACCTTCGAGAAACAACATGGGTAAGGATGATTCATGAGCTAGGATGAAGACTTTCACTTGATTCCGTGGAAAATTCACTTGGCTTGAACTTAGGTGGTGTGGAGGACAAAATCTCTTGAGAGACGGTCCAAAACGTGAAAGAACAAATGCCAAATGAAATCCTAAGCCCTAACTTATAAAACAAAAGTTTTGGCTGCCATACCCTTGGGTGCCATGTGTTCCACATGCAATTAGGGTCTGCGCAGGTCTTTAGTAAAGTATGCATAACTTCTTGTAATGAAGTCAGATTGACGAGTGGTCTGTCTCATGGGAAACTAGATCACATAACTCCTCACAGTCTAGGAGATATACTCGTTCAGAGTTGACCCTTTCGCGGCACGTAAAGGATAAACCATTCGTAGTCGCTTTTGGCTTGACTTAAACAATAAATCTTTATGAATCTGTAACCTTGTATCACCATAATAGACTGACCCTTAACTTATATACTCATTCTTGACCGTCCCGTGGTTGGACCAATTCATTGATGTTAGACTAGTCGTACTTGAACTTATAGGCACAGGGTATAACAGTTAACCCTGAGTATGTACTAGTGGGAGATAGCAGGTATCTGGACTAGTCGAGGTGCATGCAAATTCGACTCCACACCATCGTTATAAACAGATAATATACCTAATTGCACCTAGTAATCAATATAGAACGTTTGGCAAAATGCTGCAGTGCAGCACAGGTTTTTGCTTGGTCTTTGTAATTCTGAGGTTAAAGAGACTATTGAGACCCTGTTTTGTTTTATGTTGTATTTTGGAATAATGGTTTGGGAGCTTGCTAAACTTCAGGTCATTTTTTCATGGGGAAACAGTTGTGGTTATTTTACCCATTTGAGCTGCACACCTCCAGGAGGGATGCTCAAGTGTGCTCTCGAAGAGCAGCCCTCCACAGAAATCTTAGTGATTCTAGTTGTTCACTAATATGAACCTCATGGAGTATAGTTGTTCTTATTGTAAACTTTGAGGTCATAAGACCAAAATTACTCTTTTCATAGCACATGAATTAACATTGTTCTTTCTCCCATTGTTGGTATTAATATTCATTTGTGCAACACACATCAATCCCGGAACTTATTCCTGCTTCTTACTAAGGGGGTAATATTTGTAACGCTTTGTTCTCAAATTCAGGTTGTTGGTTGCCTTATTGAGCATGATAAGAAGATATTAATGTGCAGGCGCAAAATTCACCCATCATATGGACTTTGGTATGTGTCTACCAACAGAGTTTAGTGAGAAGGGAGGACTTCCTTCCACAACCTCTAAGAAAGTTCTCTATTAGTACCCAGAATTCAGAAATGTAGAGAGTACTGAAGTAATTCGAATTCCAGTATAGTAAAGTTTATCTTCAAATAATGTTGTACTGGTAGGACGCTCCCAGCTGGCTATATGGAGATTGGTGAATCTGCTGCTGAGGGAGCA</genome_strand>
        <mrna_strand>TGCTATGTGGGGAGCTGTTACCCAGAAAAAATAATGCTCAAAGCTATACAGATTGTGGGTTCATCTTCTGGGTTTGCTTCCTATAGATTTAGAAAGCCTCAACCCAATTCTGCCTTCTCCTTAATTTCGAGAAAACCCATTCTCACAACATCTGAAACTTTGTTATTGCCGGCTTCTCAACTACATAGTCACAAGTCCTGTTTTAGAGATTTTCGAATGTCTTCAACTCATTCAAAGTCATCCTCTTCTTCATCTGTTGCAGTCCAGTCAACT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAAACATTCGCAAGATCAACTTCTGCCAGTTTTGCGGGGGCCCAAATAAGCATGAGATACCTGATGGTGAAGAAAAGGTGAGAGCTATCTGCACTCATTGTGGGAAGATTACATATGAGAATCCAAAAATG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTTGGTTGCCTTATTGAGCATGATAAGAAGATATTAATGTGCAGGCGCAAAATTCACCCATCATATGGACTTTG..................................................................................................................................................................GACGCTCCCAGCTGGCTATATGGAGATTGGTGAATCTGCTGCTGAGGGAGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E229314" ref_strand="+" ref_description="SGN-E229314 [cLEL-4-B10](-)">
      <seq>agccaatttttttaaaattcacctttatgttatttaaatagatctgagagcattttgtgtttcataaattgttcaggttcctttatcttttccttgattgatttcagttcaaagattttgcagggaaacattcgcaagatcaacttctgccagttttgcgggggcccaaataagcatgagatacctgatggtgaagaaaaggtgagagctatctgcactcattgtgggaagattacatatgagaatccaaaaatggtaagattttcattaagcttcactgttccgcttgtattcttgattaaatgcagattaatcattgtattctttctcaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C03HBa0013A17.1" temp_strand="-" temp_description="C03HBa0013A17.1  AC238559.1 htgs_phase:2 submitted_to_sgn_as:gi|261249975|gb|AC238559.1| upload_account_name:jianfeng-ren Solanum lycopersicum chromosome 3 clone C03HBa0013a17, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces">
        <position start="86477" stop="85534"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="86177" g_stop="85831" g_length="347"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="347" r_length="347" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C03HBa0013A17.1" gen_strand="-" ref_id="SGN-E229314" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>347</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C03HBa0013A17.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E229314" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="86177" e_stop="85831"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCCAATTTTTTTAAAATTCACCTTTATGTTATTTAAATAGATCTGAGAGCATTTTGTGTTTCATAAATTGTTCAGGTTCCTTTATCTTTTCCTTGATTGATTTCAGTTCAAAGATTTTGCAGGGAAACATTCGCAAGATCAACTTCTGCCAGTTTTGCGGGGGCCCAAATAAGCATGAGATACCTGATGGTGAAGAAAAGGTGAGAGCTATCTGCACTCATTGTGGGAAGATTACATATGAGAATCCAAAAATGGTAAGATTTTCATTAAGCTTCACTGTTCCGCTTGTATTCTTGATTAAATGCAGATTAATCATTGTATTCTTTCTCAAAAAAAAAAAAAACTC</genome_strand>
        <mrna_strand>AGCCAATTTTTTTAAAATTCACCTTTATGTTATTTAAATAGATCTGAGAGCATTTTGTGTTTCATAAATTGTTCAGGTTCCTTTATCTTTTCCTTGATTGATTTCAGTTCAAAGATTTTGCAGGGAAACATTCGCAAGATCAACTTCTGCCAGTTTTGCGGGGGCCCAAATAAGCATGAGATACCTGATGGTGAAGAAAAGGTGAGAGCTATCTGCACTCATTGTGGGAAGATTACATATGAGAATCCAAAAATGGTAAGATTTTCATTAAGCTTCACTGTTCCGCTTGTATTCTTGATTAAATGCAGATTAATCATTGTATTCTTTCTCAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E346719" ref_strand="+" ref_description="SGN-E346719 [cTOF-28-L19]">
      <seq>agagtttcacatttttgctatgtggggagctgttacccagaaaaaataatgctcaaagctatacagattgtgggttcatcttctgggtttgcttcctatagatttagaaagcctcaacccaattctgccttctccttaatttcgagaaaacccattctcacaacatctgaaactttgttattgccggcttctcaactacatagtcacaagtcctgttttagagattttcgaatgtcttcaactcattcaaagtcatcctcttcttcatctgttgcagtccagtcaactggaaacattcgcaagatcaacttctgccagttttgcgggggcccaaataagcatgagatacctgatggtgaagaaaaggtgagagctatctgcactcattgtgggaagattacatatgagaatccaaaaatggtaagattttcattaagcttcactgttccgcttgtattcttgattaaatgcagattaatcattgtattctttctcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C03HBa0013A17.1" temp_strand="-" temp_description="C03HBa0013A17.1  AC238559.1 htgs_phase:2 submitted_to_sgn_as:gi|261249975|gb|AC238559.1| upload_account_name:jianfeng-ren Solanum lycopersicum chromosome 3 clone C03HBa0013a17, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces">
        <position start="91630" stop="85538"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91330" g_stop="91043" g_length="288"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="288" r_length="288" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91042" i_stop="86055" i_length="4988">
            <donor d_prob="0.902" d_score="1.00"/>
            <acceptor a_prob="0.900" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="86054" g_stop="85838" g_length="217"/>
          <reference_exon_boundary r_type="cDNA" r_start="289" r_stop="505" r_length="217" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C03HBa0013A17.1" gen_strand="-" ref_id="SGN-E346719" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>505</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C03HBa0013A17.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E346719" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91330" e_stop="91043"/>
          <exon e_start="86054" e_stop="85838"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGTTTCACATTTTTGCTATGTGGGGAGCTGTTACCCAGAAAAAATAATGCTCAAAGCTATACAGATTGTGGGTTCATCTTCTGGGTTTGCTTCCTATAGATTTAGAAAGCCTCAACCCAATTCTGCCTTCTCCTTAATTTCGAGAAAACCCATTCTCACAACATCTGAAACTTTGTTATTGCCGGCTTCTCAACTACATAGTCACAAGTCCTGTTTTAGAGATTTTCGAATGTCTTCAACTCATTCAAAGTCATCCTCTTCTTCATCTGTTGCAGTCCAGTCAACTGTGAGTTGTTGTTGTTACACCTGTGCATTTCTTTTGATTTACTGAAATTGATGTCTCTAAAGTGTTTGATTTTGTAATTTCTGGTGCCATTTTGCTGGACTGATTGTTGAGGAGGTTGCATATTGGAATGGAATTTGATTACTTGAACTAAAACTATTTGTTTGGGTAGGTATGAATCAATCACAAATAACATAAGTGAAATAGAGGGTGAAGTAGATAGTTTAGTTGATTTCATAGGACAATTTCAGAGCCACCTATCTAGACTTTGATCTTGATGATGCCCTCTGGGGTTGTAAAACCCACCCATCAGCTTTTACTTGATGTTTTTTTTTTTTTTGGTGTGAATACATAGTTACCATTATCAAAAAAGAAATAATCCTATATTCAATCATGAATCATCTATGCTCCAGTCCAGTGCCTTAATTTTAGGTTAGAAATTCTTGGCTTATCTAGAGTGCCAGATGTTATATTTAACATTTTTGGATTTCACGAATACCCTTTCACAGATATATGTTGGAATTTGAATGGATTGTGCACCTCTTTTGATGGTTGTTGATTTACTGAAAGAGATGACTGAAGGTGCTGGATTGTGCCATTTCTAGTTCCATTTTCTTTGTCTGTTGTTGGTTGTTCATTCTTTTTGTCTGAGCCCTGAGGTTATGTCTTGGCACATCGAATGAGATTCAAAGTGGTGTTTGACAAAGATAAGCACAGGTTTAACGCTATTTTGGACACTTTTGTTAAATAAACACAAGGTTGATTGAACTAGAATGTTTTCTATTTGACCCTTCAAGGTGGCCCAATGGTTTGCGCTTGGGACTTCCATGTTGGAGGCCTCAAGTTCGGAACCCCTTGCCAGCAAAAGCAAGGGGTTTGCCTTCTGGGTCGAGCTCCTGGTGCGGGTTACCTTTCCTATATGGTTTGCGAGCTATTGCATAGGAGCGGGGGTTTTACCCTGTGCGCACCCAAAGTGTAGCGACTGCGGGTTTCCCTTGCCATAAAAAAAAAGAATGTTTTATTTGTTTTTGTGTTAAGCATTTAGCTATTTTACCTCTTACGCAACAATTTTTGTATAAAATGAAGCCTCTGCGTTTAAAGCCTAACTAAATTATCTTTACTCATCGGGCTTTTGATGCATGCCGATAAACCATATTTGATGACCCATTTTTATTCTCTTTCTATCATTTTCTGCAAATAAATTTTGCATATATTCTGTTCATTGAAACTGCTAAATGAAAGTACGGACTAAGAAGATCAGGTATTGAATTAAAAGATGCTTTCTCTCTCTCTCCTTTGTCCTTCGCTATATTCTTGTTGACCTCATTTCCAATGCAACCTTGTTTCCATCTTATTTTCTAGCTAGCTCAATCTTGTTTACTTTATATTCTCCACATCTTGCTTAATAATCAAGTGCCTACTTTGATTTGTTGCTCAAACATTACCAAATGTAGGTGTTAACACCCTTTTAGTCTGCCAATGGTCTACACATGGAATATTTAAGGAAATTTGGAAGTAGAATTCATCAGCTTATAAGTTATTTATTTTTATTTCTGTCCAGCAGTGTTTTTAGTAGATTATTACAGCTTTTTAGTTATTTATTATCCCTATTTCTAAGTAGCAGTTGTTGCAGTAAGGAGGTTATTACTCCACTTTCTCATTTAGTTGTAGTAGGCAGTTTTAGTAGACAGCAGACAATTATTTTCCCTGTTTCAGTGTTGTATTTAATGTATTTGAATTCAGTGAAATAATAAGCAGAAAATAAGTCAAGTTTTTGAGTACTTCAAACTCAAGAGATCGCAGGTTCTCTCTTAACGAACCAGCACCATAAGTCGTAGGAAGAGAACTTCAGATTTCATATTCCAGCGTCCCATAACGAGATCCATAACAGGGACCATAACAGTAGGCCTGATATCAAATCTTCAATTTAAAGCTGCTTTATCTTCTGCTACGTTTGAGCAAAACTAACATCATAAGTCCAAAGCCATATATTCTGCTGTAAAATGCCTTTGTTGGAAGTAGTAAACATCACCTTTCCACCCATGTATTAATTTTTTCTGATGATACACCTCTGGCTTGCCCGAATCCCCCCTCCCCCCCCCCCCCTTCCCTTGTGCCATTGCTTCCACACATGACTCTTCATTTCTTGGATCCCTTTACTGGCGGAGTCATTTCCATGCACTTCTCTTCCTTATTCACTTCTTTTGCCTCATGCTATCTATCTTTATGAATAACATCGTTGCTTCCTCTTTGCACCCTTTGATATCTATCGAACTCTTCGGCGAATAAGATGATGTTCTGATGTATCCATATAGGGACATCAAAGTTTGGATCTTCTCTTCCCCCCCGGGGTATGTTGGCTCAAAGGTATTGCATCTCGAATGTTGTCAAGCTGGAATTGTTTTCTTCACTTTTCAGCATAGCGGATTCTTGCATACCACTATCTTCCCAAGGTTGAGGGATTTCAGAAATTTCTGGATTCTTTACTATCGCTTCCTCTTCTTCACTCTTTTCATGAGTTGGAAAGATTGGCTTCAAGTTCGACAGATATTGGGTCAATTAAATTAGAGGAAGAGTCATTCACTAGCCCATTTGAGATGAACTGCACCAGCAGATCTGGGCCCAAACTTTTCCTTCTAATCATAGGCCTCTTTCTCTTGATTGGGGTGGAAAGTGGGACCTCAGTCACGTGTGCCTTGTCACTTGCTGGCACATTGACCAGTTCATCACTTCAGGGTGGTCGGAGGAACCCATGTGCCCTGCCACCTTTGTAAAGCCTAAAAGGCTTTCATGTTCTAATCCACCAGTTCCTTCGTCAAACCTCTTGATCTTTGGATGTTCTTTGCTGCGTGCACCGTAAACCACCCTCGCCGGCGTCGCAACCCAGATTCGGACTTTCAAGGTTAAATGTTAGTGGACCAGCTCCACCGAGTTCGGAACAGAGACTCTGTCTCCTCTGACCTTCATCCTTGCCCATTTGAGGTGATTTCATAACTCAGTTTCTTCTTCAGTTCTAATCCAGCCTCCACATAAGTTTCCTACCTCACGGAAAATTTTTTGGGACCAAAGTTGGAGGAGCAAACCTACTACTCTGATACAGACCTGGTTCGGCCTATCATGGATGGAAGTCAATGTCAGCAACCACCACTGTAGGTTGAACTTGTAGGATTTCCACCACTTCCCTCTTACAATGTGGTCTGCAGCTGGTTTGTTGGGAAACTCAAAGAGGAAACGATTGTGCCCCAAATCGTAGATGTTGATTCCATGCTTGTGCTTCCAAGTGCTTGCCACCCACCGTCAAATCTCTGATAGAAAGGCATCTGGAAATTGGAATCTCCTCTGGGGGACATCCAACCACACCTTTTGCTAGTAGTTCATTTTGATTTGTTGTTGTCGAATCTGTAATAAAGATCAATTTCCTTTTTTTGTTGAATCTTGTAGCATTTATTCTATTGTACACCATTTATTGTTTCTGACATGTGAATAGAAGAGACCCTCTTCTGTTTTCCTGTGCAACATCTTAACTGCCTTCTGGGCCTTAGCGTTTATGAAATTCATTATTTTGGTAGCTATGCCTATCCATCCTGGGTTTAGTGACTACTCGGGGATGATGATGACAACTCTTCTCTTACCCTGCATATTTGAAATGCTAACTTATTGACCATATTTGTTATAATTCCTTGAGCAGAAGAACTCTGTGAACTGGTCCCGAAACTTCCATCTATGGACTGAATTTCCGTATGCTTCTTTAAGAGCAAATGCTAGCCGCTCATCGTCTTGTAGATAGTACTATCGTGTTCATCATGTTACAACCTCGTTCTGCCCAGTCTTACCATGTTTCAGCCCTAGAAACTACTTTGGTAATATCGTAAGATTTGAATCCTACAGCAAAATAAATGGTATAGTCCTCCATGGTTGTAACAAAGAAAAAAAGGTTGGAGAGGACTTGGGTTGAGGGAGGTTCTAGCAATGGAAGATTGCCGGAAAAGGGATTCTAGGGGCCCAGAAGAGAGCTGCAAAAGTTTCCTCGGGTAATGTGCCTGGTAGCATTTTGACTGGAAGTGATTTAATCTCTTTAATGATCCCTTTTATTATCAATTTTCCATAAGAAAAATATTATAAAGCAACAAGCATACATTTCCCAAAAAAGTCCTGCAAAAACTTTGATGTGAATATACCATCTGATGAAAAATACCTAATCACATCCTAACATCAACCTAGCGGTCAAAACATGCGCACTTGTCCAAAATGGAAGGCAATATGCAATCAGAAATAAATGGAAGTGGCTTCTTATTGCACATAGCATTCTTCTAAATGCTGGCATGCCTATGATTCTAGGTATCTGATATAGAATTGGCTGTACAAGTTGAAAACAACCAAAATCTGTTACGAACTGAGGCATTCAACTGGAGTTTCTCTCTCCTCTTCTCTCCAGCCTTATCTTTCGTTTCTCTTCCTACAAAGAGTTTTTTCATGCCAGTTGTGAAGAATAATGAACCTTGAGCTTGTCAACCCAAAGGTTAGCTTATATGTGAGGATTTCCCAACATCATATAAGGACATGAGAGCTCATTTCTTCAATCAACACAAACACTCTTAACACCCCACCCTGCACATCCAAGGGCTGGACATTTGAAGTATGACTAAATAACATGGGGGTCCAACAATATATAAACCAAGAATAGGAATGAGTCCGATGCTAATACCATTTGAAGGAAAATGAACTCTGGGCATGCTAATACCATTTGAAGAAAATGAACTTTGGGCATAACTCAACTCCAAAAGCTAGTTCATGAGGTGAGACATGCCCAACGTCATGTAAGGTTACAGCAAACCCTCTCTCCACTAATGCGAGATACTGTTACCACCAGCCAATTTTTTTAAAATTCACCTTTATGTTATTTAAATAGATCTGAGAGCATTTTGTGTTTCATAAATTGTTCAGGTTCCTTTATCTTTTCCTTGATTGATTTCAGTTCAAAGATTTTGCAGGGAAACATTCGCAAGATCAACTTCTGCCAGTTTTGCGGGGGCCCAAATAAGCATGAGATACCTGATGGTGAAGAAAAGGTGAGAGCTATCTGCACTCATTGTGGGAAGATTACATATGAGAATCCAAAAATGGTAAGATTTTCATTAAGCTTCACTGTTCCGCTTGTATTCTTGATTAAATGCAGATTAATCATTGTATTCTTTCTCAAAAAAAAAA</genome_strand>
        <mrna_strand>AGAGTTTCACATTTTTGCTATGTGGGGAGCTGTTACCCAGAAAAAATAATGCTCAAAGCTATACAGATTGTGGGTTCATCTTCTGGGTTTGCTTCCTATAGATTTAGAAAGCCTCAACCCAATTCTGCCTTCTCCTTAATTTCGAGAAAACCCATTCTCACAACATCTGAAACTTTGTTATTGCCGGCTTCTCAACTACATAGTCACAAGTCCTGTTTTAGAGATTTTCGAATGTCTTCAACTCATTCAAAGTCATCCTCTTCTTCATCTGTTGCAGTCCAGTCAACT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAAACATTCGCAAGATCAACTTCTGCCAGTTTTGCGGGGGCCCAAATAAGCATGAGATACCTGATGGTGAAGAAAAGGTGAGAGCTATCTGCACTCATTGTGGGAAGATTACATATGAGAATCCAAAAATGGTAAGATTTTCATTAAGCTTCACTGTTCCGCTTGTATTCTTGATTAAATGCAGATTAATCATTGTATTCTTTCTCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E295384" ref_strand="+" ref_description="SGN-E295384 [cLET-23-O16]">
      <seq>cacaattgacctaccaagagtttcacatttttgctatgtggggagctgttacccagaaaaaataatgctcaaagctatacagattgtgggttcatcttctgggtttgcttcctatagatttagaaagcctcaacccaattctgccttctccttaatttcgagaaaacccattctcacaacatctgaaactttgttattgccggcttctcaactacatagtcacaagtcctgttttagagattttcgaatgtcttcaactcattcaaagtcatcctcttcttcatctgttgcagtccagtcaactggaaacattcgcaagatcaacttctgccagttttgcgggggcccaaataagcatgagatacctgatggtgaagaaaaggtgagagctatctgcactcatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C03HBa0013A17.1" temp_strand="-" temp_description="C03HBa0013A17.1  AC238559.1 htgs_phase:2 submitted_to_sgn_as:gi|261249975|gb|AC238559.1| upload_account_name:jianfeng-ren Solanum lycopersicum chromosome 3 clone C03HBa0013a17, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces">
        <position start="91646" stop="85655"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91346" g_stop="91043" g_length="304"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="304" r_length="304" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91042" i_stop="86055" i_length="4988">
            <donor d_prob="0.902" d_score="1.00"/>
            <acceptor a_prob="0.900" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="86054" g_stop="85955" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="305" r_stop="404" r_length="100" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C03HBa0013A17.1" gen_strand="-" ref_id="SGN-E295384" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>404</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C03HBa0013A17.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E295384" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91346" e_stop="91043"/>
          <exon e_start="86054" e_stop="85955"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACAATTGACCTACCAAGAGTTTCACATTTTTGCTATGTGGGGAGCTGTTACCCAGAAAAAATAATGCTCAAAGCTATACAGATTGTGGGTTCATCTTCTGGGTTTGCTTCCTATAGATTTAGAAAGCCTCAACCCAATTCTGCCTTCTCCTTAATTTCGAGAAAACCCATTCTCACAACATCTGAAACTTTGTTATTGCCGGCTTCTCAACTACATAGTCACAAGTCCTGTTTTAGAGATTTTCGAATGTCTTCAACTCATTCAAAGTCATCCTCTTCTTCATCTGTTGCAGTCCAGTCAACTGTGAGTTGTTGTTGTTACACCTGTGCATTTCTTTTGATTTACTGAAATTGATGTCTCTAAAGTGTTTGATTTTGTAATTTCTGGTGCCATTTTGCTGGACTGATTGTTGAGGAGGTTGCATATTGGAATGGAATTTGATTACTTGAACTAAAACTATTTGTTTGGGTAGGTATGAATCAATCACAAATAACATAAGTGAAATAGAGGGTGAAGTAGATAGTTTAGTTGATTTCATAGGACAATTTCAGAGCCACCTATCTAGACTTTGATCTTGATGATGCCCTCTGGGGTTGTAAAACCCACCCATCAGCTTTTACTTGATGTTTTTTTTTTTTTTGGTGTGAATACATAGTTACCATTATCAAAAAAGAAATAATCCTATATTCAATCATGAATCATCTATGCTCCAGTCCAGTGCCTTAATTTTAGGTTAGAAATTCTTGGCTTATCTAGAGTGCCAGATGTTATATTTAACATTTTTGGATTTCACGAATACCCTTTCACAGATATATGTTGGAATTTGAATGGATTGTGCACCTCTTTTGATGGTTGTTGATTTACTGAAAGAGATGACTGAAGGTGCTGGATTGTGCCATTTCTAGTTCCATTTTCTTTGTCTGTTGTTGGTTGTTCATTCTTTTTGTCTGAGCCCTGAGGTTATGTCTTGGCACATCGAATGAGATTCAAAGTGGTGTTTGACAAAGATAAGCACAGGTTTAACGCTATTTTGGACACTTTTGTTAAATAAACACAAGGTTGATTGAACTAGAATGTTTTCTATTTGACCCTTCAAGGTGGCCCAATGGTTTGCGCTTGGGACTTCCATGTTGGAGGCCTCAAGTTCGGAACCCCTTGCCAGCAAAAGCAAGGGGTTTGCCTTCTGGGTCGAGCTCCTGGTGCGGGTTACCTTTCCTATATGGTTTGCGAGCTATTGCATAGGAGCGGGGGTTTTACCCTGTGCGCACCCAAAGTGTAGCGACTGCGGGTTTCCCTTGCCATAAAAAAAAAGAATGTTTTATTTGTTTTTGTGTTAAGCATTTAGCTATTTTACCTCTTACGCAACAATTTTTGTATAAAATGAAGCCTCTGCGTTTAAAGCCTAACTAAATTATCTTTACTCATCGGGCTTTTGATGCATGCCGATAAACCATATTTGATGACCCATTTTTATTCTCTTTCTATCATTTTCTGCAAATAAATTTTGCATATATTCTGTTCATTGAAACTGCTAAATGAAAGTACGGACTAAGAAGATCAGGTATTGAATTAAAAGATGCTTTCTCTCTCTCTCCTTTGTCCTTCGCTATATTCTTGTTGACCTCATTTCCAATGCAACCTTGTTTCCATCTTATTTTCTAGCTAGCTCAATCTTGTTTACTTTATATTCTCCACATCTTGCTTAATAATCAAGTGCCTACTTTGATTTGTTGCTCAAACATTACCAAATGTAGGTGTTAACACCCTTTTAGTCTGCCAATGGTCTACACATGGAATATTTAAGGAAATTTGGAAGTAGAATTCATCAGCTTATAAGTTATTTATTTTTATTTCTGTCCAGCAGTGTTTTTAGTAGATTATTACAGCTTTTTAGTTATTTATTATCCCTATTTCTAAGTAGCAGTTGTTGCAGTAAGGAGGTTATTACTCCACTTTCTCATTTAGTTGTAGTAGGCAGTTTTAGTAGACAGCAGACAATTATTTTCCCTGTTTCAGTGTTGTATTTAATGTATTTGAATTCAGTGAAATAATAAGCAGAAAATAAGTCAAGTTTTTGAGTACTTCAAACTCAAGAGATCGCAGGTTCTCTCTTAACGAACCAGCACCATAAGTCGTAGGAAGAGAACTTCAGATTTCATATTCCAGCGTCCCATAACGAGATCCATAACAGGGACCATAACAGTAGGCCTGATATCAAATCTTCAATTTAAAGCTGCTTTATCTTCTGCTACGTTTGAGCAAAACTAACATCATAAGTCCAAAGCCATATATTCTGCTGTAAAATGCCTTTGTTGGAAGTAGTAAACATCACCTTTCCACCCATGTATTAATTTTTTCTGATGATACACCTCTGGCTTGCCCGAATCCCCCCTCCCCCCCCCCCCCTTCCCTTGTGCCATTGCTTCCACACATGACTCTTCATTTCTTGGATCCCTTTACTGGCGGAGTCATTTCCATGCACTTCTCTTCCTTATTCACTTCTTTTGCCTCATGCTATCTATCTTTATGAATAACATCGTTGCTTCCTCTTTGCACCCTTTGATATCTATCGAACTCTTCGGCGAATAAGATGATGTTCTGATGTATCCATATAGGGACATCAAAGTTTGGATCTTCTCTTCCCCCCCGGGGTATGTTGGCTCAAAGGTATTGCATCTCGAATGTTGTCAAGCTGGAATTGTTTTCTTCACTTTTCAGCATAGCGGATTCTTGCATACCACTATCTTCCCAAGGTTGAGGGATTTCAGAAATTTCTGGATTCTTTACTATCGCTTCCTCTTCTTCACTCTTTTCATGAGTTGGAAAGATTGGCTTCAAGTTCGACAGATATTGGGTCAATTAAATTAGAGGAAGAGTCATTCACTAGCCCATTTGAGATGAACTGCACCAGCAGATCTGGGCCCAAACTTTTCCTTCTAATCATAGGCCTCTTTCTCTTGATTGGGGTGGAAAGTGGGACCTCAGTCACGTGTGCCTTGTCACTTGCTGGCACATTGACCAGTTCATCACTTCAGGGTGGTCGGAGGAACCCATGTGCCCTGCCACCTTTGTAAAGCCTAAAAGGCTTTCATGTTCTAATCCACCAGTTCCTTCGTCAAACCTCTTGATCTTTGGATGTTCTTTGCTGCGTGCACCGTAAACCACCCTCGCCGGCGTCGCAACCCAGATTCGGACTTTCAAGGTTAAATGTTAGTGGACCAGCTCCACCGAGTTCGGAACAGAGACTCTGTCTCCTCTGACCTTCATCCTTGCCCATTTGAGGTGATTTCATAACTCAGTTTCTTCTTCAGTTCTAATCCAGCCTCCACATAAGTTTCCTACCTCACGGAAAATTTTTTGGGACCAAAGTTGGAGGAGCAAACCTACTACTCTGATACAGACCTGGTTCGGCCTATCATGGATGGAAGTCAATGTCAGCAACCACCACTGTAGGTTGAACTTGTAGGATTTCCACCACTTCCCTCTTACAATGTGGTCTGCAGCTGGTTTGTTGGGAAACTCAAAGAGGAAACGATTGTGCCCCAAATCGTAGATGTTGATTCCATGCTTGTGCTTCCAAGTGCTTGCCACCCACCGTCAAATCTCTGATAGAAAGGCATCTGGAAATTGGAATCTCCTCTGGGGGACATCCAACCACACCTTTTGCTAGTAGTTCATTTTGATTTGTTGTTGTCGAATCTGTAATAAAGATCAATTTCCTTTTTTTGTTGAATCTTGTAGCATTTATTCTATTGTACACCATTTATTGTTTCTGACATGTGAATAGAAGAGACCCTCTTCTGTTTTCCTGTGCAACATCTTAACTGCCTTCTGGGCCTTAGCGTTTATGAAATTCATTATTTTGGTAGCTATGCCTATCCATCCTGGGTTTAGTGACTACTCGGGGATGATGATGACAACTCTTCTCTTACCCTGCATATTTGAAATGCTAACTTATTGACCATATTTGTTATAATTCCTTGAGCAGAAGAACTCTGTGAACTGGTCCCGAAACTTCCATCTATGGACTGAATTTCCGTATGCTTCTTTAAGAGCAAATGCTAGCCGCTCATCGTCTTGTAGATAGTACTATCGTGTTCATCATGTTACAACCTCGTTCTGCCCAGTCTTACCATGTTTCAGCCCTAGAAACTACTTTGGTAATATCGTAAGATTTGAATCCTACAGCAAAATAAATGGTATAGTCCTCCATGGTTGTAACAAAGAAAAAAAGGTTGGAGAGGACTTGGGTTGAGGGAGGTTCTAGCAATGGAAGATTGCCGGAAAAGGGATTCTAGGGGCCCAGAAGAGAGCTGCAAAAGTTTCCTCGGGTAATGTGCCTGGTAGCATTTTGACTGGAAGTGATTTAATCTCTTTAATGATCCCTTTTATTATCAATTTTCCATAAGAAAAATATTATAAAGCAACAAGCATACATTTCCCAAAAAAGTCCTGCAAAAACTTTGATGTGAATATACCATCTGATGAAAAATACCTAATCACATCCTAACATCAACCTAGCGGTCAAAACATGCGCACTTGTCCAAAATGGAAGGCAATATGCAATCAGAAATAAATGGAAGTGGCTTCTTATTGCACATAGCATTCTTCTAAATGCTGGCATGCCTATGATTCTAGGTATCTGATATAGAATTGGCTGTACAAGTTGAAAACAACCAAAATCTGTTACGAACTGAGGCATTCAACTGGAGTTTCTCTCTCCTCTTCTCTCCAGCCTTATCTTTCGTTTCTCTTCCTACAAAGAGTTTTTTCATGCCAGTTGTGAAGAATAATGAACCTTGAGCTTGTCAACCCAAAGGTTAGCTTATATGTGAGGATTTCCCAACATCATATAAGGACATGAGAGCTCATTTCTTCAATCAACACAAACACTCTTAACACCCCACCCTGCACATCCAAGGGCTGGACATTTGAAGTATGACTAAATAACATGGGGGTCCAACAATATATAAACCAAGAATAGGAATGAGTCCGATGCTAATACCATTTGAAGGAAAATGAACTCTGGGCATGCTAATACCATTTGAAGAAAATGAACTTTGGGCATAACTCAACTCCAAAAGCTAGTTCATGAGGTGAGACATGCCCAACGTCATGTAAGGTTACAGCAAACCCTCTCTCCACTAATGCGAGATACTGTTACCACCAGCCAATTTTTTTAAAATTCACCTTTATGTTATTTAAATAGATCTGAGAGCATTTTGTGTTTCATAAATTGTTCAGGTTCCTTTATCTTTTCCTTGATTGATTTCAGTTCAAAGATTTTGCAGGGAAACATTCGCAAGATCAACTTCTGCCAGTTTTGCGGGGGCCCAAATAAGCATGAGATACCTGATGGTGAAGAAAAGGTGAGAGCTATCTGCACTCATT</genome_strand>
        <mrna_strand>CACAATTGACCTACCAAGAGTTTCACATTTTTGCTATGTGGGGAGCTGTTACCCAGAAAAAATAATGCTCAAAGCTATACAGATTGTGGGTTCATCTTCTGGGTTTGCTTCCTATAGATTTAGAAAGCCTCAACCCAATTCTGCCTTCTCCTTAATTTCGAGAAAACCCATTCTCACAACATCTGAAACTTTGTTATTGCCGGCTTCTCAACTACATAGTCACAAGTCCTGTTTTAGAGATTTTCGAATGTCTTCAACTCATTCAAAGTCATCCTCTTCTTCATCTGTTGCAGTCCAGTCAACT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAAACATTCGCAAGATCAACTTCTGCCAGTTTTGCGGGGGCCCAAATAAGCATGAGATACCTGATGGTGAAGAAAAGGTGAGAGCTATCTGCACTCATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E203362" ref_strand="+" ref_description="SGN-E203362 [cLEB-3-P3](-)">
      <seq>gctggagatggtgcagaaagtaggtgcacacttcccgatggcgtcagaaagtgacccttccaaccaatggcaaagaagtttaggaaagtgacttgcccatataaaaggcactttcctaaacacttttcttcagtttttgcaacttgataaaaacttttcaagaactcttgcaaaggctctacaaagtaaaggcagaattattccaagaacaacagcaatatcttgagcttttcgtctagttgtttaggaatatattctcttgttcttaaactgtaaaccattcctgaatctataaaggatttggtgtgttgtgttaaaagtctaggttgtccaggtgggatagcttagtgggtagattgttttctacttaggcttgttaagcaatagaggactattgcttaacggtaagattcataactctttcttacgtttggtgtaatcgtgttttacttttgcttttgaagattagtgaaaacgattgaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C03HBa0013A17.1" temp_strand="-" temp_description="C03HBa0013A17.1  AC238559.1 htgs_phase:2 submitted_to_sgn_as:gi|261249975|gb|AC238559.1| upload_account_name:jianfeng-ren Solanum lycopersicum chromosome 3 clone C03HBa0013a17, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces">
        <position start="127074" stop="117143"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="117932" g_stop="117444" g_length="489"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="484" r_length="484" r_score="0.920"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="485" polyA_stop="501"/>
      <MATCH_line gen_id="C03HBa0013A17.1" gen_strand="-" ref_id="SGN-E203362" ref_strand="+">
        <total_alignment_score>0.920</total_alignment_score>
        <cumulative_length_of_scored_exons>489</cumulative_length_of_scored_exons>
        <coverage percentage="0.976" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C03HBa0013A17.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E203362" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="117932" e_stop="117444"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTGGAGACGGTACAGAAAGTAGGTGCACACTTCCCGATGGCGTCAGAAAAGTGTGACCTTTCTAGCCAATGGCAAAGAAGTTTAGGAAAGTGACTTGCCCATATAAAAGGCACTTTCCTAAACATTTGTGATTTTGTTTTTGCAACTTGATAAAAACTTTTCAAGAACTCTTGCAAAAGCTACACAAAGCAAAGGCAGAATTATTCCAAGAACAACAACAACATCTGGAGCTTATCATCTAGTTGTTTAGGAATTTATTCTCTTGTTCTTAAATTGTAAACCACTCCTAACTTTATAAAGGAATTGGTGTGTTGTGTTAGAAGTCTAGGTTGTCCAGGTGGGATAGCTTAGTGGGTAGATTGTTTTTCTACTTAGGCTTGTTGAGCAATAGAGGTCTATTGCTTAACGGTAAGATTGATAACTCTTTCTTACATTTGGTGTAATCGTGTTTTGCTTTTGCTTTTGAATATTAGCGAAAACGATTGAAA</genome_strand>
        <mrna_strand>GCTGGAGATGGTGCAGAAAGTAGGTGCACACTTCCCGATGGCGTCAG-AAA--GTGACCCTTCCAACCAATGGCAAAGAAGTTTAGGAAAGTGACTTGCCCATATAAAAGGCACTTTCCTAAACACTT-TTCTTCAGTTTTTGCAACTTGATAAAAACTTTTCAAGAACTCTTGCAAAGGCTCTACAAAGTAAAGGCAGAATTATTCCAAGAACAACAGCAATATCTTGAGCTTTTCGTCTAGTTGTTTAGGAATATATTCTCTTGTTCTTAAACTGTAAACCATTCCTGAATCTATAAAGGATTTGGTGTGTTGTGTTAAAAGTCTAGGTTGTCCAGGTGGGATAGCTTAGTGGGTAGATTG-TTTTCTACTTAGGCTTGTTAAGCAATAGAGGACTATTGCTTAACGGTAAGATTCATAACTCTTTCTTACGTTTGGTGTAATCGTGTTTTACTTTTGCTTTTGAAGATTAGTGAAAACGATTGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E546563" ref_strand="+" ref_description="SGN-E546563 [TUS-69-P22](-)">
      <seq>aactcaaatgttactttaactgtaaatgttatttgtagttttgatgatttgacaaacaatgggacctcataaaggtatcaggttctctaattgtgtattgcaggtgtcttgtttgaggtattgcagaagaaacaaaaccagggacctagtagaggtaccaggctctcatgaaaatgagtcagtcgactgccagctggagatggtacagaaagtaggtgcacacttcccgatggcgtcagaaaagtgtgaccttttcagcaaatggcaaaggagtttaggaaagtgacttgcccacataaaaggcactttccaaaacatttgttttttagtttttgcaacttgataaaaacttttcaagaacacttgcaaaggctacacaaaaggtagaatcattccaagaacaacagcaacatcttgagcttgtcgtatagttgtttaggaatttattctcttgttgttaaattgtaaaccactgctaaatctataaaggaattggtgtgttgtgtaaaagtctaggttgtccaagtgggatagcttagtgggtagattgtttttctacttaggcttgttgagcaatagaggactattgtttaacggtaagattgataactctttcttacgtttggtgaaaaaaaaaaaaaaaaaaactcgaggggggcccg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C03HBa0013A17.1" temp_strand="-" temp_description="C03HBa0013A17.1  AC238559.1 htgs_phase:2 submitted_to_sgn_as:gi|261249975|gb|AC238559.1| upload_account_name:jianfeng-ren Solanum lycopersicum chromosome 3 clone C03HBa0013a17, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces">
        <position start="127246" stop="117189"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="118838" g_stop="118818" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="20" r_length="20" r_score="0.619"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="118817" i_stop="118105" i_length="713">
            <donor d_prob="0.890" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="118104" g_stop="117493" g_length="612"/>
          <reference_exon_boundary r_type="cDNA" r_start="21" r_stop="627" r_length="607" r_score="0.913"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="629" polyA_stop="648"/>
      <MATCH_line gen_id="C03HBa0013A17.1" gen_strand="-" ref_id="SGN-E546563" ref_strand="+">
        <total_alignment_score>0.913</total_alignment_score>
        <cumulative_length_of_scored_exons>633</cumulative_length_of_scored_exons>
        <coverage percentage="0.956" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C03HBa0013A17.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E546563" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="118838" e_stop="118818"/>
          <exon e_start="118104" e_stop="117493"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGGCAAAGGCTTACCAAAAAGCAAGATGGCTCAACTTCTTGAGGACCTGGATCAGCTTAAACATGAGACTGAAGAACTCACTGTGCGGTTGAGTAGTAAAGAGGCTGAAATTGTTGTACTCAAAGCAGAGCTGCTTACTGCATAGAGTGAGGGACCTGGTTCTTCAGGTGTACAAGTTCTGGAGAAAGAGAACAATGAGTTGAAGGAGAAGATAACTGCCCTGCAAGAAAAGGCCATCAAGGATAATGATGCTGCCAATGCACGACTCACTCTTGTTATCCAGTCCCTATCTCAAACTCCCCCCTCTTCCTAAATTGTCAATCAATCCTTCCCTGTGTCATTTTCTTTTTGTGGCTGATCATCGTGTTGATGGATTTTTAGTTTGTCTTTAATGTATTTATGTTATAATGGCATGTTGGTTACTTTATTCCTTTGTTGTTCTTCCAATGTTCTTTTGTGATTGCTCTTCCTCTACTGTTTGATCGCTTATTAGCTCTGATCTTGCTCAGTATTTATGATTGACTCAATGGTTTACTGCATATCTTTTTTATGATTCCAAAAGGGGGAAGTAAACTGTTAGTAGCTAAATAAGGGGGAAGTAAATTGTTAGTAGCTAAACAAGGGGGAAGTAATCTATTAGTACCTAAATAAGGGGAATTTACAGTAAGGGGGAATACACTGTCAGGGGGAACAGATCTCAGATCATATCATTGTTTGTCATCATCAAAAAGGGGGAAAATGTTATTTGTAGTTTTGATGATTTGACAAACTTAGGGACCTCATAAAGGTACTGGGTTTTCTACTTGAGTATTGCAGGTGTCTTGTTTGAAGTATTGCAGATGAAACAAACCCAGGGACCTTGTAGAGGTACCACGCTCTCATGATGATGAGCAAGTCGACTGCCAGCTGGAGACGGTACAGAAAGTAGGTGCACACTTCCCGATGGCGTCAGAAAAGTGTGACCTTTCTAGCCAATGGCAAAGAAGTTTAGGAAAGTGACTTGCCCATATAAAAGGCACTTTCCTAAACATTTGTGATTTTGTTTTTGCAACTTGATAAAAACTTTTCAAGAACTCTTGCAAAAGCTACACAAAGCAAAGGCAGAATTATTCCAAGAACAACAACAACATCTGGAGCTTATCATCTAGTTGTTTAGGAATTTATTCTCTTGTTCTTAAATTGTAAACCACTCCTAACTTTATAAAGGAATTGGTGTGTTGTGTTAGAAGTCTAGGTTGTCCAGGTGGGATAGCTTAGTGGGTAGATTGTTTTTCTACTTAGGCTTGTTGAGCAATAGAGGTCTATTGCTTAACGGTAAGATTGATAACTCTTTCTTACATTTGGT</genome_strand>
        <mrna_strand>AACTCAAATG-TTACTTTAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAAATGTTATTTGTAGTTTTGATGATTTGACAAACAATGGGACCTCATAAAGGTATCAGGTTCTCTAATTGTGTATTGCAGGTGTCTTGTTTGAGGTATTGCAGAAGAAACAAAACCAGGGACCTAGTAGAGGTACCAGGCTCTCATGAAAATGAGTCAGTCGACTGCCAGCTGGAGATGGTACAGAAAGTAGGTGCACACTTCCCGATGGCGTCAGAAAAGTGTGACCTTTTCAGCAAATGGCAAAGGAGTTTAGGAAAGTGACTTGCCCACATAAAAGGCACTTTCCAAAACATTTGTTTTTTAGTTTTTGCAACTTGATAAAAACTTTTCAAGAACACTTGCAAAGGCTACAC--A--AAAGGTAGAATCATTCCAAGAACAACAGCAACATCTTGAGCTTGTCGTATAGTTGTTTAGGAATTTATTCTCTTGTTGTTAAATTGTAAACCACTGCTAAATCTATAAAGGAATTGGTGTGTTGTG-TAAAAGTCTAGGTTGTCCAAGTGGGATAGCTTAGTGGGTAGATTGTTTTTCTACTTAGGCTTGTTGAGCAATAGAGGACTATTGTTTAACGGTAAGATTGATAACTCTTTCTTACGTTTGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E246710" ref_strand="+" ref_description="SGN-E246710 [cLEF-45-O22]">
      <seq>cacaaaccgacatatagatttaggggatcggagtgtcacgtaccgacacaagaggattaatgaatattgagggagcggagtgtcacgtaccgacacaagagaaataaagataatgaatcttgaaagatgttaatatactcaatctaatgaacatgattcccaaatgagtatggtattgaggcttgagtcctcatgtgtgaacttgacggtaattgttaatgatatagtatttgttgttgctacatgttgagtatcatagttgattttatgatattacttggtatatatattgatttctattttgagttggccgatgatatctactcagtacccgtgttttgtactgacccctacttttatgttctcttcttgtttatttgtggagtgcagcaaacgtgccatcgtgttcaactcaacagtaattcaagccagtcttactacatcggaaattcagggtgagctaatgcttctagcttggact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C03HBa0013A17.1" temp_strand="-" temp_description="C03HBa0013A17.1  AC238559.1 htgs_phase:2 submitted_to_sgn_as:gi|261249975|gb|AC238559.1| upload_account_name:jianfeng-ren Solanum lycopersicum chromosome 3 clone C03HBa0013a17, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces">
        <position start="134723" stop="133645"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="134423" g_stop="133945" g_length="479"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="481" r_length="481" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C03HBa0013A17.1" gen_strand="-" ref_id="SGN-E246710" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>479</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C03HBa0013A17.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E246710" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="134423" e_stop="133945"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACGAACCGACACATAGATTTAGGGGATCGGAGTGTCACGTACCGACACAAGAGGATTAATGAATATTGAGGGAGCGGAGTGTCACGTACCGACACAAGAGAAATAAAGATAATGAATCTTGAAAGATGTTAATATACTCAATCTAATGAACATGATTCCCAAATGAGTATGGTATCGAGGCTTGAGTCCTCATGTGTGAACTTGACGGTAATTGTTAATGATATAGTATTTGTTGTTGCTACATGTTGAGTATCATAGTTGATTTTATGATATTACTTGG--TATATATTGATTTCTATTTTGAGTTGGCCGATGATATCTACTCAGTACCCGTGTTTTGTACTGACCCCTACTTTTATGTTCTCTTCTTGTCTATTTGTGGAGTGCAGCAAACGTGCCATCGTCTTCAACTCAACAGTAATTCAAGCCAGTCTTACTACATCGGAAATTCAGGGTGAGCTAATGCTTCTAGCTTGGAAT</genome_strand>
        <mrna_strand>CACAAACCGACATATAGATTTAGGGGATCGGAGTGTCACGTACCGACACAAGAGGATTAATGAATATTGAGGGAGCGGAGTGTCACGTACCGACACAAGAGAAATAAAGATAATGAATCTTGAAAGATGTTAATATACTCAATCTAATGAACATGATTCCCAAATGAGTATGGTATTGAGGCTTGAGTCCTCATGTGTGAACTTGACGGTAATTGTTAATGATATAGTATTTGTTGTTGCTACATGTTGAGTATCATAGTTGATTTTATGATATTACTTGGTATATATATTGATTTCTATTTTGAGTTGGCCGATGATATCTACTCAGTACCCGTGTTTTGTACTGACCCCTACTTTTATGTTCTCTTCTTGTTTATTTGTGGAGTGCAGCAAACGTGCCATCGTGTTCAACTCAACAGTAATTCAAGCCAGTCTTACTACATCGGAAATTCAGGGTGAGCTAATGCTTCTAGCTTGGACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E357033" ref_strand="+" ref_description="SGN-E357033 [cTOS-22-C24]">
      <seq>actgaatagatatcatcgcccaactcaaaatagaaatcaatatatatcaagnattatcataaaatcaactatgatactcaacatgtagcaacaacaagcactatatcattaacaattaccgtcacgttcacacatgaggactcaagcctcaataccatactcatttgggaatcatgttcattagatttagtatattaacatctttcaagattcattatctttatttctcttgtgacggaacatgacattccgctccctcatattcattaatcctcttgtgtgaacacatgacactccgatcccctaaatctacatgacagtttcatgaacgctatcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C03HBa0013A17.1" temp_strand="+" temp_description="C03HBa0013A17.1  AC238559.1 htgs_phase:2 submitted_to_sgn_as:gi|261249975|gb|AC238559.1| upload_account_name:jianfeng-ren Solanum lycopersicum chromosome 3 clone C03HBa0013a17, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces">
        <position start="133797" stop="134804"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="134097" g_stop="134434" g_length="338"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="337" r_length="337" r_score="0.911"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C03HBa0013A17.1" gen_strand="+" ref_id="SGN-E357033" ref_strand="+">
        <total_alignment_score>0.911</total_alignment_score>
        <cumulative_length_of_scored_exons>338</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C03HBa0013A17.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E357033" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="134097" e_stop="134434"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTGAGTAGATATCATCGGCCAACTCAAAATAGAAATCAATATATACCAAGTAATATCATAAAATCAACTATGATACTCAACATGTAGCAACAACAAATACTATATCATTAACAATTACCGTCAAGTTCACACATGAGGACTCAAGCCTCGATACCATACTCATTTGGGAATCATGTTCATTAGATTGAGTATATTAACATCTTTCAAGATTCATTATCTTTATTTCTCTTGTGTCGGTACGTGACACTCCGCTCCCTCAATATTCATTAATCCTCTTGTGTCGGTACGTGACACTCCGATCCCCTAAATCTATGTGTC-GGTTCGTGACACCCGATCC</genome_strand>
        <mrna_strand>ACTGAATAGATATCATCGCCCAACTCAAAATAGAAATCAATATATATCAAGNATTATCATAAAATCAACTATGATACTCAACATGTAGCAACAACAAGCACTATATCATTAACAATTACCGTCACGTTCACACATGAGGACTCAAGCCTCAATACCATACTCATTTGGGAATCATGTTCATTAGATTTAGTATATTAACATCTTTCAAGATTCATTATCTTTATTTCTCTTGTGACGGAACATGACATTCCGCTCCCTC-ATATTCATTAATCCTCTTGTGTGAACACATGACACTCCGATCCCCTAAATCTACATGACAGTTTCATGA-ACGCTATCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E391780" ref_strand="+" ref_description="SGN-E391780 [TUS-24-O2]">
      <seq>tcacaaaccgacatatagatttaggggatcggagtgtcacgtaccgacacaagaggattaatgaatattgagggagcggagtgtcacgtaccgacacaagagaaataaagataatgaatcttgaaagatgttaatatactcaatctaatgaacatgattcccaaatgagtatggtattgaggcttgagtcctcatgtgtgaacttgacggtaattgttaatgatatagtatttgttgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C03HBa0013A17.1" temp_strand="-" temp_description="C03HBa0013A17.1  AC238559.1 htgs_phase:2 submitted_to_sgn_as:gi|261249975|gb|AC238559.1| upload_account_name:jianfeng-ren Solanum lycopersicum chromosome 3 clone C03HBa0013a17, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces">
        <position start="134724" stop="133888"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="134424" g_stop="134186" g_length="239"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="239" r_length="239" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C03HBa0013A17.1" gen_strand="-" ref_id="SGN-E391780" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>239</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C03HBa0013A17.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E391780" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="134424" e_stop="134186"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCACGAACCGACACATAGATTTAGGGGATCGGAGTGTCACGTACCGACACAAGAGGATTAATGAATATTGAGGGAGCGGAGTGTCACGTACCGACACAAGAGAAATAAAGATAATGAATCTTGAAAGATGTTAATATACTCAATCTAATGAACATGATTCCCAAATGAGTATGGTATCGAGGCTTGAGTCCTCATGTGTGAACTTGACGGTAATTGTTAATGATATAGTATTTGTTGTT</genome_strand>
        <mrna_strand>TCACAAACCGACATATAGATTTAGGGGATCGGAGTGTCACGTACCGACACAAGAGGATTAATGAATATTGAGGGAGCGGAGTGTCACGTACCGACACAAGAGAAATAAAGATAATGAATCTTGAAAGATGTTAATATACTCAATCTAATGAACATGATTCCCAAATGAGTATGGTATTGAGGCTTGAGTCCTCATGTGTGAACTTGACGGTAATTGTTAATGATATAGTATTTGTTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E349726" ref_strand="+" ref_description="SGN-E349726 [cTOS-3-C5]">
      <seq>tagtcttcggtggaggtaggttattgtttctcttacgatattcgtagtaaactcttaatagagaatgatatgtattgataatattgtaaaccctgctatgtgcttaattgtatgcttgcatgaatgtaactatataattgttattatataagcatgatgaagttattgaatcccaaatcttgtaaaaacctaatctctttttaatgatgatgccttggtaagggagaaggcttgatgaactaaagtaatgagattgatgatgccttggtaagggagaaggcttgatgaattgatagaatgagattaggggatcgggtgtcacgaactgacacgtagaattaggggatcgggtgtcacaaaccgacacgtagattaagggatcaggtgtcacgaaccaacacatagattaggggatcgggtgtcacgaaccgacacgtagatttaggggatcgggtgtcacgaaccgacacgtagatttaggggatcgggtgtcacgaaccgacacgtagatttaggggatcaggtgtcacgaaccgacacgtagatttaggggatcggagtgtcacgttccgacacgtagatttaggggatcagagtatcacgtaccgacacaagaagattaatgaatatganggagcggaatgtcacgtaccgacacaagagaaataaagacaatgaatcttgaaagatgttatatactcaatctaatgaacataa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C03HBa0013A17.1" temp_strand="-" temp_description="C03HBa0013A17.1  AC238559.1 htgs_phase:2 submitted_to_sgn_as:gi|261249975|gb|AC238559.1| upload_account_name:jianfeng-ren Solanum lycopersicum chromosome 3 clone C03HBa0013a17, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces">
        <position start="135354" stop="134054"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="135055" g_stop="134551" g_length="505"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="505" r_length="505" r_score="0.917"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="134550" i_stop="134481" i_length="70">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="134480" g_stop="134268" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="506" r_stop="717" r_length="212" r_score="0.925"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C03HBa0013A17.1" gen_strand="-" ref_id="SGN-E349726" ref_strand="+">
        <total_alignment_score>0.919</total_alignment_score>
        <cumulative_length_of_scored_exons>718</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C03HBa0013A17.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E349726" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="135055" e_stop="134551"/>
          <exon e_start="134480" e_stop="134268"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATCTTCGGTGGAGGTAGGTTATGGTTT-TC--ATGCT-TTCATAGTAAACTCTTAATAGAGAATGATATGCATTGGTACTATTGTAAACCCTGCTATGTGCTTAATTGTATGCATGCATGAACGTGATTATATAATTGTGATTATATTAAGCATGATGAAGTTATTGAATCCCAAATCTTGATAAAAACCTAATCTCTTTTTAATGATGATGCCTTGGTAAGGGAGAAGGCTTGATGAACTAAAGTAATGAGATTGATGATGCCTTGGTAAGAAAGAAGGCTTGATGAATTGATGGAAAGAGATTAGGGGATCGGGTGTCACGGACCGACACGTAGTATTAGGGGATCCGGTGTCACGAACCGACACGTAGTATTAGGGGATCGGGTGTCACGAACCGACACGTAGATTTAGGGGATCGGGTGTCACGAACCGACACGTAGAATTAGGGGATCGGGTGTCACGAACCGACACGTAGTATTAGGGGATCGGGTGTCACGAACCGACACGTAGTATTAGGGGATCGGGTGTCACGAACCGACACGTAGTATTAGGGGATCGGGTGTCACGAACTGACACGTAGATTTAGGGGATCGGGTGTCACGAACCGACACATAGATTTAGGGGATCGG-GTGTCACGAACCGACACATAGATTTAGGGGATCGGAGTGTCACGTACCGACACAAGAGGATTAATGAATATTGAGGGAGCGGAGTGTCACGTACCGACACAAGAGAAATAAAGATAATGAATCTTGAAAGATGTTAATATACTCAATCTAATGAACATGA</genome_strand>
        <mrna_strand>TAGTCTTCGGTGGAGGTAGGTTATTGTTTCTCTTACGATATTCGTAGTAAACTCTTAATAGAGAATGATATGTATTGATAATATTGTAAACCCTGCTATGTGCTTAATTGTATGCTTGCATGAATGTAACTATATAATTGTTATTATA-TAAGCATGATGAAGTTATTGAATCCCAAATCTTG-TAAAAACCTAATCTCTTTTTAATGATGATGCCTTGGTAAGGGAGAAGGCTTGATGAACTAAAGTAATGAGATTGATGATGCCTTGGTAAGGGAGAAGGCTTGATGAATTGATAGAATGAGATTAGGGGATCGGGTGTCACGAACTGACACGTAGAATTAGGGGATCGGGTGTCACAAACCGACACGTAG-ATTAAGGGATCAGGTGTCACGAACCAACACATAGA-TTAGGGGATCGGGTGTCACGAACCGACACGTAGATTTAGGGGATCGGGTGTCACGAACCGACACGTAGATTTAGGGGATCGGGTGTCACGAACCGACAC......................................................................GTAGATTTAGGGGATCAGGTGTCACGAACCGACACGTAGATTTAGGGGATCGGAGTGTCACGTTCCGACACGTAGATTTAGGGGATCAGAGTATCACGTACCGACACAAGAAGATTAATGAATA-TGANGGAGCGGAATGTCACGTACCGACACAAGAGAAATAAAGACAATGAATCTTGAAAGATGTT-ATATACTCAATCTAATGAACATAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E357559" ref_strand="+" ref_description="SGN-E357559 [cTOS-23-F2]">
      <seq>tagtcttcggtggaggtaggttattgtttctcttacgatattcgtagtaaactcttaatagagaatgatatgtattgataatattgtaaaccctgctatgtgcttaattgtatgcttgcatgaatgtaactatataattgttattatataagcatgatgaagttattgaatcccaaatcttgtaaaaacctaatctctttttaatgatgatgccttggtaagggagaaggcttgatgaactaaagtaatgagattgatgatgccttggtaagggagaaggcttgatgaattgatagaatgagattaggggatcgggtgtcacgaactgacacgtagaattaggggatcgggtgtcacaaaccgacacgtagattaagggatcaggtgtcacgaaccaacaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C03HBa0013A17-4qf6j/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C03HBa0013A17.1" temp_strand="-" temp_description="C03HBa0013A17.1  AC238559.1 htgs_phase:2 submitted_to_sgn_as:gi|261249975|gb|AC238559.1| upload_account_name:jianfeng-ren Solanum lycopersicum chromosome 3 clone C03HBa0013a17, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces">
        <position start="135354" stop="134356"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="135055" g_stop="134655" g_length="401"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="402" r_length="402" r_score="0.905"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C03HBa0013A17.1" gen_strand="-" ref_id="SGN-E357559" ref_strand="+">
        <total_alignment_score>0.905</total_alignment_score>
        <cumulative_length_of_scored_exons>401</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C03HBa0013A17.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E357559" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="135055" e_stop="134655"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATCTTCGGTGGAGGTAGGTTATGGTTT-TC--ATGCT-TTCATAGTAAACTCTTAATAGAGAATGATATGCATTGGTACTATTGTAAACCCTGCTATGTGCTTAATTGTATGCATGCATGAACGTGATTATATAATTGTGATTATATTAAGCATGATGAAGTTATTGAATCCCAAATCTTGATAAAAACCTAATCTCTTTTTAATGATGATGCCTTGGTAAGGGAGAAGGCTTGATGAACTAAAGTAATGAGATTGATGATGCCTTGGTAAGAAAGAAGGCTTGATGAATTGATGGAAAGAGATTAGGGGATCGGGTGTCACGGACCGACACGTAGTATTAGGGGATCCGGTGTCACGAACCGACACGTAGTATTAGGGGATCGGGTGTCACGAACCGACACG</genome_strand>
        <mrna_strand>TAGTCTTCGGTGGAGGTAGGTTATTGTTTCTCTTACGATATTCGTAGTAAACTCTTAATAGAGAATGATATGTATTGATAATATTGTAAACCCTGCTATGTGCTTAATTGTATGCTTGCATGAATGTAACTATATAATTGTTATTATA-TAAGCATGATGAAGTTATTGAATCCCAAATCTTG-TAAAAACCTAATCTCTTTTTAATGATGATGCCTTGGTAAGGGAGAAGGCTTGATGAACTAAAGTAATGAGATTGATGATGCCTTGGTAAGGGAGAAGGCTTGATGAATTGATAGAATGAGATTAGGGGATCGGGTGTCACGAACTGACACGTAGAATTAGGGGATCGGGTGTCACAAACCGACACGTAG-ATTAAGGGATCAGGTGTCACGAACCAACACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>35</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="22352" PGL_stop="7991"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="22352" e_stop="22113"/>
            <exon e_start="19779" e_stop="19658"/>
            <exon e_start="19579" e_stop="19496"/>
            <exon e_start="13503" e_stop="13407"/>
            <exon e_start="9828" e_stop="9612"/>
            <exon e_start="8767" e_stop="8715"/>
            <exon e_start="8314" e_stop="7991"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.912" acc_prob="0.950" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.978" e_score="1.000"/>
          <exon-intron don_prob="0.979" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.981"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="22352" e_stop="22113" e_length="240"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.997">
            <gDNA_intron_boundary i_start="22112" i_stop="19780" i_length="2333"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="19779" e_stop="19658" e_length="122"/>
          </exon>
          <intron i_serial="2" don_prob="0.995" acc_prob="0.993">
            <gDNA_intron_boundary i_start="19657" i_stop="19580" i_length="78"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="19579" e_stop="19496" e_length="84"/>
          </exon>
          <intron i_serial="3" don_prob="0.912" acc_prob="0.950">
            <gDNA_intron_boundary i_start="19495" i_stop="13504" i_length="5992"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="13503" e_stop="13407" e_length="97"/>
          </exon>
          <intron i_serial="4" don_prob="0.989" acc_prob="0.995">
            <gDNA_intron_boundary i_start="13406" i_stop="9829" i_length="3578"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="9828" e_stop="9612" e_length="217"/>
          </exon>
          <intron i_serial="5" don_prob="0.989" acc_prob="0.978">
            <gDNA_intron_boundary i_start="9611" i_stop="8768" i_length="844"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="8767" e_stop="8715" e_length="53"/>
          </exon>
          <intron i_serial="6" don_prob="0.979" acc_prob="1.000">
            <gDNA_intron_boundary i_start="8714" i_stop="8315" i_length="400"/>
          </intron>
          <exon e_serial="7" e_score="0.981">
            <gDNA_exon_boundary e_start="8314" e_stop="7991" e_length="324"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22352" stop="22113"/>
              <exon start="19779" stop="19658"/>
              <exon start="19579" stop="19496"/>
              <exon start="13503" stop="13407"/>
              <exon start="9828" stop="9612"/>
              <exon start="8767" stop="8715"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E719640" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22335" stop="22113"/>
              <exon start="19779" stop="19658"/>
              <exon start="19579" stop="19496"/>
              <exon start="13503" stop="13407"/>
              <exon start="9828" stop="9620"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E578134" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22334" stop="22113"/>
              <exon start="19779" stop="19658"/>
              <exon start="19579" stop="19496"/>
              <exon start="13503" stop="13407"/>
              <exon start="9828" stop="9808"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319001" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22329" stop="22113"/>
              <exon start="19779" stop="19658"/>
              <exon start="19579" stop="19496"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E335973" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22328" stop="22113"/>
              <exon start="19779" stop="19658"/>
              <exon start="19579" stop="19496"/>
              <exon start="13503" stop="13407"/>
              <exon start="9828" stop="9612"/>
              <exon start="8767" stop="8715"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E257184" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22274" stop="22113"/>
              <exon start="19779" stop="19658"/>
              <exon start="19579" stop="19496"/>
              <exon start="13503" stop="13407"/>
              <exon start="9828" stop="9810"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E337114" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22272" stop="22113"/>
              <exon start="19779" stop="19658"/>
              <exon start="19579" stop="19496"/>
              <exon start="13503" stop="13407"/>
              <exon start="9828" stop="9784"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E322984" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19703" stop="19658"/>
              <exon start="19579" stop="19496"/>
              <exon start="13503" stop="13407"/>
              <exon start="9828" stop="9612"/>
              <exon start="8767" stop="8715"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E279308" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9723" stop="9612"/>
              <exon start="8767" stop="8715"/>
              <exon start="8314" stop="7991"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E370577" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CACAACCACATTCTAATGGCTACTTCACTTCAAAATTTGGTACCACCATTTTCTTGCCGGCGTACGACCTATACATCTCCTTGTACACCTATCGCCATTTTCCGAGGAGGGAGAAGAAGAAATGCAAGAAAGATGTTGAGGGTCTGTAGAGCTATGGTTGAGAAGACAGTACAAGGGGCTTCTTCTACTTTTGCTAAGGAAATGGAAAGGCTTTCAGCTAAAGAGTCTCTGCTTCTTGCA : TTCAAAGATGCTGGTGGATTTGAAGCATTGGTCACTGGGAAGACAACAGATGTACAATGCATTGATGTGAATGAGAGGATTATTAGTCTCGAGAAGCTCAATCCGACGCCTCGTCCCTCAAC : GTCTCCCAATTTGGAAGGACGATGGAATTTTGAGTGGTTTGGAGCTGGTAGCCCAGTTCTTCTTCTTGCCAAAATATTTTTTGG : GAGAATTCCTCCAACATTGGCAAATTTATCAAAATTGGATGTGTTGATCAAGGATGGATGTGGGACTGCTACCGCACAAGTCAAAATACTAAATTCG : ATTGAGAATAAATTTATCATCTCCACCAAGTATAGTGTTGAAGGGCCTCTTCGTATGAAAGAAGAGTATGTTGAAGGGGAATTTGAATCTCCAAAAGTCGATGAGGAAGCTGTACCTGAACAACTAAGAGGTGCTTTTGGCCAGGCATTTAATACTCTGCAACAACTTCCTGTCCCCATTAGAGATGCTGTGTCCAGTGGCATGAAAGTTTCTCTAA : GCGGGACCTTTCAGAGACTTATTCTGATTTCCTACCTTGATGACGAGATCCTG : ATCATAAGGAATACTGCAGGAGAACCTGAGGTTCTAACAAGGTTGGAAGCAGGACCTGATCCGCAAAATATAACCGAATATGAGAGTTAAGTGACTGTAGGCACATTTTGCATGAAAAAAAAAACAACTTTGTTTTTACTATTAGTTCATATTTCTATGTAACATAAGATAAATAATACATTGGCAATATCTCTCATTGTGTAATCCCACATCGATGAGCAACGAACATGAGCTGACCCCATTATTGGTAAAAACTTGCCGTGGTTTTGTGAATGAGTCCTTGAGGCTAAAGAAGTGGTTGTCTGAGTTGGTATTAAACATATC</gDNA_template>
            <first_frame> H  N  H  I  L  M  A  T  S  L  Q  N  L  V  P  P  F  S  C  R  R  T  T  Y  T  S  P  C  T  P  I  A  I  F  R  G  G  R  R  R  N  A  R  K  M  L  R  V  C  R  A  M  V  E  K  T  V  Q  G  A  S  S  T  F  A  K  E  M  E  R  L  S  A  K  E  S  L  L  L  A  :  F  K  D  A  G  G  F  E  A  L  V  T  G  K  T  T  D  V  Q  C  I  D  V  N  E  R  I  I  S  L  E  K  L  N  P  T  P  R  P  S  T :   S  P  N  L  E  G  R  W  N  F  E  W  F  G  A  G  S  P  V  L  L  L  A  K  I  F  F  G :   R  I  P  P  T  L  A  N  L  S  K  L  D  V  L  I  K  D  G  C  G  T  A  T  A  Q  V  K  I  L  N  S  :  I  E  N  K  F  I  I  S  T  K  Y  S  V  E  G  P  L  R  M  K  E  E  Y  V  E  G  E  F  E  S  P  K  V  D  E  E  A  V  P  E  Q  L  R  G  A  F  G  Q  A  F  N  T  L  Q  Q  L  P  V  P  I  R  D  A  V  S  S  G  M  K  V  S  L   : S  G  T  F  Q  R  L  I  L  I  S  Y  L  D  D  E  I  L  :  I  I  R  N  T  A  G  E  P  E  V  L  T  R  L  E  A  G  P  D  P  Q  N  I  T  E  Y  E  S  *  V  T  V  G  T  F  C  M  K  K  K  T  T  L  F  L  L  L  V  H  I  S  M  *  H  K  I  N  N  T  L  A  I  S  L  I  V  *  S  H  I  D  E  Q  R  T  *  A  D  P  I  I  G  K  N  L  P  W  F  C  E  *  V  L  E  A  K  E  V  V  V  *  V  G  I  K  H  I </first_frame>
            <second_frame>  T  T  T  F  *  W  L  L  H  F  K  I  W  Y  H  H  F  L  A  G  V  R  P  I  H  L  L  V  H  L  S  P  F  S  E  E  G  E  E  E  M  Q  E  R  C  *  G  S  V  E  L  W  L  R  R  Q  Y  K  G  L  L  L  L  L  L  R  K  W  K  G  F  Q  L  K  S  L  C  F  L  H :   S  K  M  L  V  D  L  K  H  W  S  L  G  R  Q  Q  M  Y  N  A  L  M  *  M  R  G  L  L  V  S  R  S  S  I  R  R  L  V  P  Q   : R  L  P  I  W  K  D  D  G  I  L  S  G  L  E  L  V  A  Q  F  F  F  L  P  K  Y  F  L   : G  E  F  L  Q  H  W  Q  I  Y  Q  N  W  M  C  *  S  R  M  D  V  G  L  L  P  H  K  S  K  Y  *  I  R :   L  R  I  N  L  S  S  P  P  S  I  V  L  K  G  L  F  V  *  K  K  S  M  L  K  G  N  L  N  L  Q  K  S  M  R  K  L  Y  L  N  N  *  E  V  L  L  A  R  H  L  I  L  C  N  N  F  L  S  P  L  E  M  L  C  P  V  A  *  K  F  L  *  :  A  G  P  F  R  D  L  F  *  F  P  T  L  M  T  R  S  * :   S  *  G  I  L  Q  E  N  L  R  F  *  Q  G  W  K  Q  D  L  I  R  K  I  *  P  N  M  R  V  K  *  L  *  A  H  F  A  *  K  K  K  Q  L  C  F  Y  Y  *  F  I  F  L  C  N  I  R  *  I  I  H  W  Q  Y  L  S  L  C  N  P  T  S  M  S  N  E  H  E  L  T  P  L  L  V  K  T  C  R  G  F  V  N  E  S  L  R  L  K  K  W  L  S  E  L  V  L  N  I   </second_frame>
            <third_frame>   Q  P  H  S  N  G  Y  F  T  S  K  F  G  T  T  I  F  L  P  A  Y  D  L  Y  I  S  L  Y  T  Y  R  H  F  P  R  R  E  K  K  K  C  K  K  D  V  E  G  L  *  S  Y  G  *  E  D  S  T  R  G  F  F  Y  F  C  *  G  N  G  K  A  F  S  *  R  V  S  A  S  C   : I  Q  R  C  W  W  I  *  S  I  G  H  W  E  D  N  R  C  T  M  H  *  C  E  *  E  D  Y  *  S  R  E  A  Q  S  D  A  S  S  L  N  :  V  S  Q  F  G  R  T  M  E  F  *  V  V  W  S  W  *  P  S  S  S  S  C  Q  N  I  F  W  :  E  N  S  S  N  I  G  K  F  I  K  I  G  C  V  D  Q  G  W  M  W  D  C  Y  R  T  S  Q  N  T  K  F   : D  *  E  *  I  Y  H  L  H  Q  V  *  C  *  R  A  S  S  Y  E  R  R  V  C  *  R  G  I  *  I  S  K  S  R  *  G  S  C  T  *  T  T  K  R  C  F  W  P  G  I  *  Y  S  A  T  T  S  C  P  H  *  R  C  C  V  Q  W  H  E  S  F  S  K :   R  D  L  S  E  T  Y  S  D  F  L  P  *  *  R  D  P   : D  H  K  E  Y  C  R  R  T  *  G  S  N  K  V  G  S  R  T  *  S  A  K  Y  N  R  I  *  E  L  S  D  C  R  H  I  L  H  E  K  K  N  N  F  V  F  T  I  S  S  Y  F  Y  V  T  *  D  K  *  Y  I  G  N  I  S  H  C  V  I  P  H  R  *  A  T  N  M  S  *  P  H  Y  W  *  K  L  A  V  V  L  *  M  S  P  *  G  *  R  S  G  C  L  S  W  Y  *  T  Y  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C03HBa0013A17.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="22352" stop="22113"/>
                    <exon start="19779" stop="19658"/>
                    <exon start="19579" stop="19496"/>
                    <exon start="13503" stop="13407"/>
                    <exon start="9828" stop="9612"/>
                    <exon start="8767" stop="8715"/>
                    <exon start="8314" stop="8225"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>900</number_coding_nucleotides>
                  <number_encoded_amino_acids>300</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HNHILMATSLQNLVPPFSCRRTTYTSPCTPIAIFRGGRRRNARKMLRVCRAMVEKTVQGASSTFAKEMERLSAKESLLLAFKDAGGFEALVTGKTTDVQCIDVNERIISLEKLNPTPRPSTSPNLEGRWNFEWFGAGSPVLLLAKIFFGRIPPTLANLSKLDVLIKDGCGTATAQVKILNSIENKFIISTKYSVEGPLRMKEEYVEGEFESPKVDEEAVPEQLRGAFGQAFNTLQQLPVPIRDAVSSGMKVSLSGTFQRLILISYLDDEILIIRNTAGEPEVLTRLEAGPDPQNITEYES*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="22334" e_stop="22113"/>
            <exon e_start="19779" e_stop="19658"/>
            <exon e_start="19579" e_stop="19496"/>
            <exon e_start="13503" e_stop="13407"/>
            <exon e_start="9828" e_stop="9697"/>
            <exon e_start="8767" e_stop="8715"/>
            <exon e_start="8314" e_stop="8287"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.912" acc_prob="0.950" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.234" acc_prob="0.978" e_score="0.970"/>
          <exon-intron don_prob="0.979" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="22334" e_stop="22113" e_length="222"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.997">
            <gDNA_intron_boundary i_start="22112" i_stop="19780" i_length="2333"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="19779" e_stop="19658" e_length="122"/>
          </exon>
          <intron i_serial="2" don_prob="0.995" acc_prob="0.993">
            <gDNA_intron_boundary i_start="19657" i_stop="19580" i_length="78"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="19579" e_stop="19496" e_length="84"/>
          </exon>
          <intron i_serial="3" don_prob="0.912" acc_prob="0.950">
            <gDNA_intron_boundary i_start="19495" i_stop="13504" i_length="5992"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="13503" e_stop="13407" e_length="97"/>
          </exon>
          <intron i_serial="4" don_prob="0.989" acc_prob="0.995">
            <gDNA_intron_boundary i_start="13406" i_stop="9829" i_length="3578"/>
          </intron>
          <exon e_serial="5" e_score="0.970">
            <gDNA_exon_boundary e_start="9828" e_stop="9697" e_length="132"/>
          </exon>
          <intron i_serial="5" don_prob="0.234" acc_prob="0.978">
            <gDNA_intron_boundary i_start="9696" i_stop="8768" i_length="929"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="8767" e_stop="8715" e_length="53"/>
          </exon>
          <intron i_serial="6" don_prob="0.979" acc_prob="1.000">
            <gDNA_intron_boundary i_start="8714" i_stop="8315" i_length="400"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="8314" e_stop="8287" e_length="28"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22334" stop="22113"/>
              <exon start="19779" stop="19658"/>
              <exon start="19579" stop="19496"/>
              <exon start="13503" stop="13407"/>
              <exon start="9828" stop="9808"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319001" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22329" stop="22113"/>
              <exon start="19779" stop="19658"/>
              <exon start="19579" stop="19496"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E335973" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22306" stop="22113"/>
              <exon start="19779" stop="19658"/>
              <exon start="19579" stop="19496"/>
              <exon start="13503" stop="13407"/>
              <exon start="9828" stop="9697"/>
              <exon start="8767" stop="8715"/>
              <exon start="8314" stop="8287"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E728404" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22274" stop="22113"/>
              <exon start="19779" stop="19658"/>
              <exon start="19579" stop="19496"/>
              <exon start="13503" stop="13407"/>
              <exon start="9828" stop="9810"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E337114" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22272" stop="22113"/>
              <exon start="19779" stop="19658"/>
              <exon start="19579" stop="19496"/>
              <exon start="13503" stop="13407"/>
              <exon start="9828" stop="9784"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E322984" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCTACTTCACTTCAAAATTTGGTACCACCATTTTCTTGCCGGCGTACGACCTATACATCTCCTTGTACACCTATCGCCATTTTCCGAGGAGGGAGAAGAAGAAATGCAAGAAAGATGTTGAGGGTCTGTAGAGCTATGGTTGAGAAGACAGTACAAGGGGCTTCTTCTACTTTTGCTAAGGAAATGGAAAGGCTTTCAGCTAAAGAGTCTCTGCTTCTTGCA : TTCAAAGATGCTGGTGGATTTGAAGCATTGGTCACTGGGAAGACAACAGATGTACAATGCATTGATGTGAATGAGAGGATTATTAGTCTCGAGAAGCTCAATCCGACGCCTCGTCCCTCAAC : GTCTCCCAATTTGGAAGGACGATGGAATTTTGAGTGGTTTGGAGCTGGTAGCCCAGTTCTTCTTCTTGCCAAAATATTTTTTGG : GAGAATTCCTCCAACATTGGCAAATTTATCAAAATTGGATGTGTTGATCAAGGATGGATGTGGGACTGCTACCGCACAAGTCAAAATACTAAATTCG : ATTGAGAATAAATTTATCATCTCCACCAAGTATAGTGTTGAAGGGCCTCTTCGTATGAAAGAAGAGTATGTTGAAGGGGAATTTGAATCTCCAAAAGTCGATGAGGAAGCTGTACCTGAACAACTAAGAGGT : GCGGGACCTTTCAGAGACTTATTCTGATTTCCTACCTTGATGACGAGATCCTG : ATCATAAGGAATACTGCAGGAGAACCTG</gDNA_template>
            <first_frame> A  T  S  L  Q  N  L  V  P  P  F  S  C  R  R  T  T  Y  T  S  P  C  T  P  I  A  I  F  R  G  G  R  R  R  N  A  R  K  M  L  R  V  C  R  A  M  V  E  K  T  V  Q  G  A  S  S  T  F  A  K  E  M  E  R  L  S  A  K  E  S  L  L  L  A  :  F  K  D  A  G  G  F  E  A  L  V  T  G  K  T  T  D  V  Q  C  I  D  V  N  E  R  I  I  S  L  E  K  L  N  P  T  P  R  P  S  T :   S  P  N  L  E  G  R  W  N  F  E  W  F  G  A  G  S  P  V  L  L  L  A  K  I  F  F  G :   R  I  P  P  T  L  A  N  L  S  K  L  D  V  L  I  K  D  G  C  G  T  A  T  A  Q  V  K  I  L  N  S  :  I  E  N  K  F  I  I  S  T  K  Y  S  V  E  G  P  L  R  M  K  E  E  Y  V  E  G  E  F  E  S  P  K  V  D  E  E  A  V  P  E  Q  L  R  G  :  A  G  P  F  R  D  L  F  *  F  P  T  L  M  T  R  S  * :   S  *  G  I  L  Q  E  N  L </first_frame>
            <second_frame>  L  L  H  F  K  I  W  Y  H  H  F  L  A  G  V  R  P  I  H  L  L  V  H  L  S  P  F  S  E  E  G  E  E  E  M  Q  E  R  C  *  G  S  V  E  L  W  L  R  R  Q  Y  K  G  L  L  L  L  L  L  R  K  W  K  G  F  Q  L  K  S  L  C  F  L  H :   S  K  M  L  V  D  L  K  H  W  S  L  G  R  Q  Q  M  Y  N  A  L  M  *  M  R  G  L  L  V  S  R  S  S  I  R  R  L  V  P  Q   : R  L  P  I  W  K  D  D  G  I  L  S  G  L  E  L  V  A  Q  F  F  F  L  P  K  Y  F  L   : G  E  F  L  Q  H  W  Q  I  Y  Q  N  W  M  C  *  S  R  M  D  V  G  L  L  P  H  K  S  K  Y  *  I  R :   L  R  I  N  L  S  S  P  P  S  I  V  L  K  G  L  F  V  *  K  K  S  M  L  K  G  N  L  N  L  Q  K  S  M  R  K  L  Y  L  N  N  *  E  V :   R  D  L  S  E  T  Y  S  D  F  L  P  *  *  R  D  P   : D  H  K  E  Y  C  R  R  T   </second_frame>
            <third_frame>   Y  F  T  S  K  F  G  T  T  I  F  L  P  A  Y  D  L  Y  I  S  L  Y  T  Y  R  H  F  P  R  R  E  K  K  K  C  K  K  D  V  E  G  L  *  S  Y  G  *  E  D  S  T  R  G  F  F  Y  F  C  *  G  N  G  K  A  F  S  *  R  V  S  A  S  C   : I  Q  R  C  W  W  I  *  S  I  G  H  W  E  D  N  R  C  T  M  H  *  C  E  *  E  D  Y  *  S  R  E  A  Q  S  D  A  S  S  L  N  :  V  S  Q  F  G  R  T  M  E  F  *  V  V  W  S  W  *  P  S  S  S  S  C  Q  N  I  F  W  :  E  N  S  S  N  I  G  K  F  I  K  I  G  C  V  D  Q  G  W  M  W  D  C  Y  R  T  S  Q  N  T  K  F   : D  *  E  *  I  Y  H  L  H  Q  V  *  C  *  R  A  S  S  Y  E  R  R  V  C  *  R  G  I  *  I  S  K  S  R  *  G  S  C  T  *  T  T  K  R   : C  G  T  F  Q  R  L  I  L  I  S  Y  L  D  D  E  I  L  :  I  I  R  N  T  A  G  E  P  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C03HBa0013A17.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="22334" stop="22113"/>
                    <exon start="19779" stop="19658"/>
                    <exon start="19579" stop="19496"/>
                    <exon start="13503" stop="13407"/>
                    <exon start="9828" stop="9697"/>
                    <exon start="8767" stop="8741"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>681</number_coding_nucleotides>
                  <number_encoded_amino_acids>227</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ATSLQNLVPPFSCRRTTYTSPCTPIAIFRGGRRRNARKMLRVCRAMVEKTVQGASSTFAKEMERLSAKESLLLAFKDAGGFEALVTGKTTDVQCIDVNERIISLEKLNPTPRPSTSPNLEGRWNFEWFGAGSPVLLLAKIFFGRIPPTLANLSKLDVLIKDGCGTATAQVKILNSIENKFIISTKYSVEGPLRMKEEYVEGEFESPKVDEEAVPEQLRGAGPFRDLF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="13886" PGL_stop="14674"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="13886" e_stop="14674"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.914"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.914">
            <gDNA_exon_boundary e_start="13886" e_stop="14674" e_length="789"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13886" stop="14674"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E538064" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATGTAACTGTTGCCAATCTGTGTTATGAAAATCAGAAATTACTGATTGTAATAAATCAGTCAGAAACACTAAGTAACTGAGATTTTTAGAACCAGTAAAAAAGGTGAACAGAAATTTATTGGTAAAAAAAAAAATTGAATCTTTAAAACTTACCAGAATCTGGAATACTTTTTTTAATAATATAGGAAGAAAATCAAGTCCACTGAATTCACAGTGTCCCCTTAAGGAAATTATTCCCCTCTAGTATCCGAGGTTTGATTTGGAATATAACCTCCCAAGGTAAAATGATCTTAATCAGTAGAGTATAGATACCAAAAACTCTACTGTCAGCGAATCAATCCACAGCAGGAAAGTACACGAAGAAATATGTGTTTTTAAGAAGAAGGAAGATCTAGAAAATTCGGAGGAAAATATTCTGAAGACTGAATGGTATTTATAGGCAAGAAGAATATATTCTGAAAGGTTGCAACCCTTTCAGAATTGACACGACCATTAATGAAAGGTTGCAAACTTTCAAATGGTATTGATTGTTCCTGAAAGTTGCAACCTTTCAGAACAGTCATGACGGAAATTTTTAAATATAACGGAATTTAAAACGGGTCACGTGCGCGATCCGAGTTGGGTCGGGTTAACTAAAAAGTTGAAAACATTTCGGTTAACTTCTGTTATCAACTAATTAATTGAAAATAATTTTTGGCCATTAAATTAATTAAATAAATAATTAAAATAAATTTGTCCAAAAAATTATCTCTCGATCATTTGCCAAAGCCGTAGCCGACGCCGAAGCGA</gDNA_template>
            <first_frame> M  *  L  L  P  I  C  V  M  K  I  R  N  Y  *  L  *  *  I  S  Q  K  H  *  V  T  E  I  F  R  T  S  K  K  G  E  Q  K  F  I  G  K  K  K  N  *  I  F  K  T  Y  Q  N  L  E  Y  F  F  *  *  Y  R  K  K  I  K  S  T  E  F  T  V  S  P  *  G  N  Y  S  P  L  V  S  E  V  *  F  G  I  *  P  P  K  V  K  *  S  *  S  V  E  Y  R  Y  Q  K  L  Y  C  Q  R  I  N  P  Q  Q  E  S  T  R  R  N  M  C  F  *  E  E  G  R  S  R  K  F  G  G  K  Y  S  E  D  *  M  V  F  I  G  K  K  N  I  F  *  K  V  A  T  L  S  E  L  T  R  P  L  M  K  G  C  K  L  S  N  G  I  D  C  S  *  K  L  Q  P  F  R  T  V  M  T  E  I  F  K  Y  N  G  I  *  N  G  S  R  A  R  S  E  L  G  R  V  N  *  K  V  E  N  I  S  V  N  F  C  Y  Q  L  I  N  *  K  *  F  L  A  I  K  L  I  K  *  I  I  K  I  N  L  S  K  K  L  S  L  D  H  L  P  K  P  *  P  T  P  K  R </first_frame>
            <second_frame>  C  N  C  C  Q  S  V  L  *  K  S  E  I  T  D  C  N  K  S  V  R  N  T  K  *  L  R  F  L  E  P  V  K  K  V  N  R  N  L  L  V  K  K  K  I  E  S  L  K  L  T  R  I  W  N  T  F  F  N  N  I  G  R  K  S  S  P  L  N  S  Q  C  P  L  K  E  I  I  P  L  *  Y  P  R  F  D  L  E  Y  N  L  P  R  *  N  D  L  N  Q  *  S  I  D  T  K  N  S  T  V  S  E  S  I  H  S  R  K  V  H  E  E  I  C  V  F  K  K  K  E  D  L  E  N  S  E  E  N  I  L  K  T  E  W  Y  L  *  A  R  R  I  Y  S  E  R  L  Q  P  F  Q  N  *  H  D  H  *  *  K  V  A  N  F  Q  M  V  L  I  V  P  E  S  C  N  L  S  E  Q  S  *  R  K  F  L  N  I  T  E  F  K  T  G  H  V  R  D  P  S  W  V  G  L  T  K  K  L  K  T  F  R  L  T  S  V  I  N  *  L  I  E  N  N  F  W  P  L  N  *  L  N  K  *  L  K  *  I  C  P  K  N  Y  L  S  I  I  C  Q  S  R  S  R  R  R  S   </second_frame>
            <third_frame>   V  T  V  A  N  L  C  Y  E  N  Q  K  L  L  I  V  I  N  Q  S  E  T  L  S  N  *  D  F  *  N  Q  *  K  R  *  T  E  I  Y  W  *  K  K  K  L  N  L  *  N  L  P  E  S  G  I  L  F  L  I  I  *  E  E  N  Q  V  H  *  I  H  S  V  P  L  R  K  L  F  P  S  S  I  R  G  L  I  W  N  I  T  S  Q  G  K  M  I  L  I  S  R  V  *  I  P  K  T  L  L  S  A  N  Q  S  T  A  G  K  Y  T  K  K  Y  V  F  L  R  R  R  K  I  *  K  I  R  R  K  I  F  *  R  L  N  G  I  Y  R  Q  E  E  Y  I  L  K  G  C  N  P  F  R  I  D  T  T  I  N  E  R  L  Q  T  F  K  W  Y  *  L  F  L  K  V  A  T  F  Q  N  S  H  D  G  N  F  *  I  *  R  N  L  K  R  V  T  C  A  I  R  V  G  S  G  *  L  K  S  *  K  H  F  G  *  L  L  L  S  T  N  *  L  K  I  I  F  G  H  *  I  N  *  I  N  N  *  N  K  F  V  Q  K  I  I  S  R  S  F  A  K  A  V  A  D  A  E  A  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C03HBa0013A17.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="91393" PGL_stop="79545"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="91393" e_stop="91043"/>
            <exon e_start="86054" e_stop="85923"/>
            <exon e_start="83302" e_stop="83226"/>
            <exon e_start="83063" e_stop="82928"/>
            <exon e_start="82841" e_stop="82701"/>
            <exon e_start="82579" e_stop="82521"/>
            <exon e_start="79914" e_stop="79545"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.902" acc_prob="0.900" e_score="0.994"/>
          <exon-intron don_prob="0.995" acc_prob="0.954" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.797" acc_prob="0.905" e_score="1.000"/>
          <exon-intron don_prob="0.973" acc_prob="0.997" e_score="1.000"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="91393" e_stop="91043" e_length="351"/>
          </exon>
          <intron i_serial="1" don_prob="0.902" acc_prob="0.900">
            <gDNA_intron_boundary i_start="91042" i_stop="86055" i_length="4988"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="86054" e_stop="85923" e_length="132"/>
          </exon>
          <intron i_serial="2" don_prob="0.995" acc_prob="0.954">
            <gDNA_intron_boundary i_start="85922" i_stop="83303" i_length="2620"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="83302" e_stop="83226" e_length="77"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.994">
            <gDNA_intron_boundary i_start="83225" i_stop="83064" i_length="162"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="83063" e_stop="82928" e_length="136"/>
          </exon>
          <intron i_serial="4" don_prob="0.900" acc_prob="0.995">
            <gDNA_intron_boundary i_start="82927" i_stop="82842" i_length="86"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="82841" e_stop="82701" e_length="141"/>
          </exon>
          <intron i_serial="5" don_prob="0.797" acc_prob="0.905">
            <gDNA_intron_boundary i_start="82700" i_stop="82580" i_length="121"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="82579" e_stop="82521" e_length="59"/>
          </exon>
          <intron i_serial="6" don_prob="0.973" acc_prob="0.997">
            <gDNA_intron_boundary i_start="82520" i_stop="79915" i_length="2606"/>
          </intron>
          <exon e_serial="7" e_score="0.997">
            <gDNA_exon_boundary e_start="79914" e_stop="79545" e_length="370"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91393" stop="91043"/>
              <exon start="86054" stop="85923"/>
              <exon start="83302" stop="83226"/>
              <exon start="83063" stop="82928"/>
              <exon start="82841" stop="82701"/>
              <exon start="82579" stop="82521"/>
              <exon start="79914" stop="79649"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E746060" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91346" stop="91043"/>
              <exon start="86054" stop="85955"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295384" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91316" stop="91043"/>
              <exon start="86054" stop="85923"/>
              <exon start="83302" stop="83226"/>
              <exon start="83063" stop="82928"/>
              <exon start="82841" stop="82706"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540503" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91315" stop="91043"/>
              <exon start="86054" stop="85923"/>
              <exon start="83302" stop="83226"/>
              <exon start="83063" stop="83012"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289223" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91308" stop="91043"/>
              <exon start="86054" stop="85923"/>
              <exon start="83302" stop="83226"/>
              <exon start="83063" stop="82928"/>
              <exon start="82841" stop="82702"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E723426" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="86029" stop="85923"/>
              <exon start="83302" stop="83226"/>
              <exon start="83063" stop="82928"/>
              <exon start="82841" stop="82701"/>
              <exon start="82579" stop="82521"/>
              <exon start="79914" stop="79596"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E548395" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83234" stop="83226"/>
              <exon start="83063" stop="82928"/>
              <exon start="82841" stop="82701"/>
              <exon start="82579" stop="82521"/>
              <exon start="79914" stop="79617"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E377112" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83232" stop="83226"/>
              <exon start="83063" stop="82928"/>
              <exon start="82841" stop="82701"/>
              <exon start="82579" stop="82521"/>
              <exon start="79914" stop="79611"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E377113" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83232" stop="83226"/>
              <exon start="83063" stop="82928"/>
              <exon start="82841" stop="82701"/>
              <exon start="82579" stop="82521"/>
              <exon start="79914" stop="79667"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232082" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83232" stop="83226"/>
              <exon start="83063" stop="82928"/>
              <exon start="82841" stop="82701"/>
              <exon start="82579" stop="82521"/>
              <exon start="79914" stop="79718"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238152" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83232" stop="83226"/>
              <exon start="83063" stop="82928"/>
              <exon start="82841" stop="82701"/>
              <exon start="82579" stop="82521"/>
              <exon start="79914" stop="79757"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244712" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83232" stop="83226"/>
              <exon start="83063" stop="82928"/>
              <exon start="82841" stop="82726"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E233533" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83063" stop="82928"/>
              <exon start="82841" stop="82701"/>
              <exon start="82579" stop="82521"/>
              <exon start="79914" stop="79715"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238204" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79752" stop="79545"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E225301" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79752" stop="79545"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E225473" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGATATGGTGAAGGGGGATGTTCATCAGTCAAAATCCAGCGGCAAATCACAATTGACCTACCAAGAGTTTCACATTTTTGCTATGTGGGGAGCTGTTACCCAGAAAAAATAATGCTCAAAGCTATACAGATTGTGGGTTCATCTTCTGGGTTTGCTTCCTATAGATTTAGAAAGCCTCAACCCAATTCTGCCTTCTCCTTAATTTCGAGAAAACCCATTCTCACAACATCTGAAACTTTGTTATTGCCGGCTTCTCAACTACATAGTCACAAGTCCTGTTTTAGAGATTTTCGAATGTCTTCAACTCATTCAAAGTCATCCTCTTCTTCATCTGTTGCAGTCCAGTCAACT : GGAAACATTCGCAAGATCAACTTCTGCCAGTTTTGCGGGGGCCCAAATAAGCATGAGATACCTGATGGTGAAGAAAAGGTGAGAGCTATCTGCACTCATTGTGGGAAGATTACATATGAGAATCCAAAAATG : GTTGTTGGTTGCCTTATTGAGCATGATAAGAAGATATTAATGTGCAGGCGCAAAATTCACCCATCATATGGACTTTG : GACGCTCCCAGCTGGCTATATGGAGATTGGTGAATCTGCTGCTGAGGGAGCAATTAGGGAAACCTGGGAAGAGGCAAATGCAGAAGTAGAGGTTCAATCACTTTTTGCTCAATTGGACATCCCTCTTATAGGACAA : ACGTACATGATTTTTTTGGCAAAACTGAAAAATCCCCACTTTTCACCTGGTCCAGAATCATCAGAATGTCAGCTTTTTGAACTTGATGATATTCCTTTTGATTCTTTAGCATTTTCATCAATGCTAGTAAGCTTGAATCTG : TACATAGAAGATATTAAAGTTGGAAGACCGAAGTTCCATTATGGCGTCATTAACAAGAG : GCCTGGAACAAGCCCTTCTGATATCCATGCTTACACTCTGGATTTTCATATGCAATCCTGAGAAGCAGATACAATATTTTCAAGCACTAGAATGCGGTTGGTATGTTCGTCAAGACTGAAACAGCTCCGGTGTTTTCATCAAAGCTTTAGTTGTGTACTTGTGGTGATAGTTCCATTCTTTCTAATCACTTATCTAGTAGTAAAAAGTCTTCCTGATTTGAGTTGTTCAAAATTGACTTATGATGTGTGCAGACTGAACTTATAAGATGGGACACATCCACATTCAATTCATTATCAGATTAACATCGATTGTGACAACTGATACAAGAATCAATGAAACACATAATATATCCAACCAAACAATTTTCAC</gDNA_template>
            <first_frame> G  Y  G  E  G  G  C  S  S  V  K  I  Q  R  Q  I  T  I  D  L  P  R  V  S  H  F  C  Y  V  G  S  C  Y  P  E  K  I  M  L  K  A  I  Q  I  V  G  S  S  S  G  F  A  S  Y  R  F  R  K  P  Q  P  N  S  A  F  S  L  I  S  R  K  P  I  L  T  T  S  E  T  L  L  L  P  A  S  Q  L  H  S  H  K  S  C  F  R  D  F  R  M  S  S  T  H  S  K  S  S  S  S  S  S  V  A  V  Q  S  T  :  G  N  I  R  K  I  N  F  C  Q  F  C  G  G  P  N  K  H  E  I  P  D  G  E  E  K  V  R  A  I  C  T  H  C  G  K  I  T  Y  E  N  P  K  M  :  V  V  G  C  L  I  E  H  D  K  K  I  L  M  C  R  R  K  I  H  P  S  Y  G  L  W :   T  L  P  A  G  Y  M  E  I  G  E  S  A  A  E  G  A  I  R  E  T  W  E  E  A  N  A  E  V  E  V  Q  S  L  F  A  Q  L  D  I  P  L  I  G  Q  :  T  Y  M  I  F  L  A  K  L  K  N  P  H  F  S  P  G  P  E  S  S  E  C  Q  L  F  E  L  D  D  I  P  F  D  S  L  A  F  S  S  M  L  V  S  L  N  L  :  Y  I  E  D  I  K  V  G  R  P  K  F  H  Y  G  V  I  N  K  R :   P  G  T  S  P  S  D  I  H  A  Y  T  L  D  F  H  M  Q  S  *  E  A  D  T  I  F  S  S  T  R  M  R  L  V  C  S  S  R  L  K  Q  L  R  C  F  H  Q  S  F  S  C  V  L  V  V  I  V  P  F  F  L  I  T  Y  L  V  V  K  S  L  P  D  L  S  C  S  K  L  T  Y  D  V  C  R  L  N  L  *  D  G  T  H  P  H  S  I  H  Y  Q  I  N  I  D  C  D  N  *  Y  K  N  Q  *  N  T  *  Y  I  Q  P  N  N  F  H </first_frame>
            <second_frame>  D  M  V  K  G  D  V  H  Q  S  K  S  S  G  K  S  Q  L  T  Y  Q  E  F  H  I  F  A  M  W  G  A  V  T  Q  K  K  *  C  S  K  L  Y  R  L  W  V  H  L  L  G  L  L  P  I  D  L  E  S  L  N  P  I  L  P  S  P  *  F  R  E  N  P  F  S  Q  H  L  K  L  C  Y  C  R  L  L  N  Y  I  V  T  S  P  V  L  E  I  F  E  C  L  Q  L  I  Q  S  H  P  L  L  H  L  L  Q  S  S  Q  L :   E  T  F  A  R  S  T  S  A  S  F  A  G  A  Q  I  S  M  R  Y  L  M  V  K  K  R  *  E  L  S  A  L  I  V  G  R  L  H  M  R  I  Q  K  W :   L  L  V  A  L  L  S  M  I  R  R  Y  *  C  A  G  A  K  F  T  H  H  M  D  F   : G  R  S  Q  L  A  I  W  R  L  V  N  L  L  L  R  E  Q  L  G  K  P  G  K  R  Q  M  Q  K  *  R  F  N  H  F  L  L  N  W  T  S  L  L  *  D  K :   R  T  *  F  F  W  Q  N  *  K  I  P  T  F  H  L  V  Q  N  H  Q  N  V  S  F  L  N  L  M  I  F  L  L  I  L  *  H  F  H  Q  C  *  *  A  *  I  C :   T  *  K  I  L  K  L  E  D  R  S  S  I  M  A  S  L  T  R   : G  L  E  Q  A  L  L  I  S  M  L  T  L  W  I  F  I  C  N  P  E  K  Q  I  Q  Y  F  Q  A  L  E  C  G  W  Y  V  R  Q  D  *  N  S  S  G  V  F  I  K  A  L  V  V  Y  L  W  *  *  F  H  S  F  *  S  L  I  *  *  *  K  V  F  L  I  *  V  V  Q  N  *  L  M  M  C  A  D  *  T  Y  K  M  G  H  I  H  I  Q  F  I  I  R  L  T  S  I  V  T  T  D  T  R  I  N  E  T  H  N  I  S  N  Q  T  I  F   </second_frame>
            <third_frame>   I  W  *  R  G  M  F  I  S  Q  N  P  A  A  N  H  N  *  P  T  K  S  F  T  F  L  L  C  G  E  L  L  P  R  K  N  N  A  Q  S  Y  T  D  C  G  F  I  F  W  V  C  F  L  *  I  *  K  A  S  T  Q  F  C  L  L  L  N  F  E  K  T  H  S  H  N  I  *  N  F  V  I  A  G  F  S  T  T  *  S  Q  V  L  F  *  R  F  S  N  V  F  N  S  F  K  V  I  L  F  F  I  C  C  S  P  V  N   : W  K  H  S  Q  D  Q  L  L  P  V  L  R  G  P  K  *  A  *  D  T  *  W  *  R  K  G  E  S  Y  L  H  S  L  W  E  D  Y  I  *  E  S  K  N   : G  C  W  L  P  Y  *  A  *  *  E  D  I  N  V  Q  A  Q  N  S  P  I  I  W  T  L  :  D  A  P  S  W  L  Y  G  D  W  *  I  C  C  *  G  S  N  *  G  N  L  G  R  G  K  C  R  S  R  G  S  I  T  F  C  S  I  G  H  P  S  Y  R  T   : N  V  H  D  F  F  G  K  T  E  K  S  P  L  F  T  W  S  R  I  I  R  M  S  A  F  *  T  *  *  Y  S  F  *  F  F  S  I  F  I  N  A  S  K  L  E  S   : V  H  R  R  Y  *  S  W  K  T  E  V  P  L  W  R  H  *  Q  E  :  A  W  N  K  P  F  *  Y  P  C  L  H  S  G  F  S  Y  A  I  L  R  S  R  Y  N  I  F  K  H  *  N  A  V  G  M  F  V  K  T  E  T  A  P  V  F  S  S  K  L  *  L  C  T  C  G  D  S  S  I  L  S  N  H  L  S  S  S  K  K  S  S  *  F  E  L  F  K  I  D  L  *  C  V  Q  T  E  L  I  R  W  D  T  S  T  F  N  S  L  S  D  *  H  R  L  *  Q  L  I  Q  E  S  M  K  H  I  I  Y  P  T  K  Q  F  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C03HBa0013A17.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="91393" stop="91043"/>
                    <exon start="86054" stop="85923"/>
                    <exon start="83302" stop="83226"/>
                    <exon start="83063" stop="82928"/>
                    <exon start="82841" stop="82701"/>
                    <exon start="82579" stop="82521"/>
                    <exon start="79914" stop="79854"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>954</number_coding_nucleotides>
                  <number_encoded_amino_acids>318</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GYGEGGCSSVKIQRQITIDLPRVSHFCYVGSCYPEKIMLKAIQIVGSSSGFASYRFRKPQPNSAFSLISRKPILTTSETLLLPASQLHSHKSCFRDFRMSSTHSKSSSSSSVAVQSTGNIRKINFCQFCGGPNKHEIPDGEEKVRAICTHCGKITYENPKMVVGCLIEHDKKILMCRRKIHPSYGLWTLPAGYMEIGESAAEGAIRETWEEANAEVEVQSLFAQLDIPLIGQTYMIFLAKLKNPHFSPGPESSECQLFELDDIPFDSLAFSSMLVSLNLYIEDIKVGRPKFHYGVINKRPGTSPSDIHAYTLDFHMQS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C03HBa0013A17.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="79853" stop="79650"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>201</number_coding_nucleotides>
                  <number_encoded_amino_acids>67</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EADTIFSSTRMRLVCSSRLKQLRCFHQSFSCVLVVIVPFFLITYLVVKSLPDLSCSKLTYDVCRLNL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="91346" e_stop="91043"/>
            <exon e_start="86054" e_stop="85838"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.902" acc_prob="0.900" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="91346" e_stop="91043" e_length="304"/>
          </exon>
          <intron i_serial="1" don_prob="0.902" acc_prob="0.900">
            <gDNA_intron_boundary i_start="91042" i_stop="86055" i_length="4988"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="86054" e_stop="85838" e_length="217"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91346" stop="91043"/>
              <exon start="86054" stop="85955"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295384" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91330" stop="91043"/>
              <exon start="86054" stop="85838"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E346719" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CACAATTGACCTACCAAGAGTTTCACATTTTTGCTATGTGGGGAGCTGTTACCCAGAAAAAATAATGCTCAAAGCTATACAGATTGTGGGTTCATCTTCTGGGTTTGCTTCCTATAGATTTAGAAAGCCTCAACCCAATTCTGCCTTCTCCTTAATTTCGAGAAAACCCATTCTCACAACATCTGAAACTTTGTTATTGCCGGCTTCTCAACTACATAGTCACAAGTCCTGTTTTAGAGATTTTCGAATGTCTTCAACTCATTCAAAGTCATCCTCTTCTTCATCTGTTGCAGTCCAGTCAACT : GGAAACATTCGCAAGATCAACTTCTGCCAGTTTTGCGGGGGCCCAAATAAGCATGAGATACCTGATGGTGAAGAAAAGGTGAGAGCTATCTGCACTCATTGTGGGAAGATTACATATGAGAATCCAAAAATGGTAAGATTTTCATTAAGCTTCACTGTTCCGCTTGTATTCTTGATTAAATGCAGATTAATCATTGTATTCTTTCTCAAAAAAAAAA</gDNA_template>
            <first_frame> H  N  *  P  T  K  S  F  T  F  L  L  C  G  E  L  L  P  R  K  N  N  A  Q  S  Y  T  D  C  G  F  I  F  W  V  C  F  L  *  I  *  K  A  S  T  Q  F  C  L  L  L  N  F  E  K  T  H  S  H  N  I  *  N  F  V  I  A  G  F  S  T  T  *  S  Q  V  L  F  *  R  F  S  N  V  F  N  S  F  K  V  I  L  F  F  I  C  C  S  P  V  N   : W  K  H  S  Q  D  Q  L  L  P  V  L  R  G  P  K  *  A  *  D  T  *  W  *  R  K  G  E  S  Y  L  H  S  L  W  E  D  Y  I  *  E  S  K  N  G  K  I  F  I  K  L  H  C  S  A  C  I  L  D  *  M  Q  I  N  H  C  I  L  S  Q  K  K   </first_frame>
            <second_frame>  T  I  D  L  P  R  V  S  H  F  C  Y  V  G  S  C  Y  P  E  K  I  M  L  K  A  I  Q  I  V  G  S  S  S  G  F  A  S  Y  R  F  R  K  P  Q  P  N  S  A  F  S  L  I  S  R  K  P  I  L  T  T  S  E  T  L  L  L  P  A  S  Q  L  H  S  H  K  S  C  F  R  D  F  R  M  S  S  T  H  S  K  S  S  S  S  S  S  V  A  V  Q  S  T  :  G  N  I  R  K  I  N  F  C  Q  F  C  G  G  P  N  K  H  E  I  P  D  G  E  E  K  V  R  A  I  C  T  H  C  G  K  I  T  Y  E  N  P  K  M  V  R  F  S  L  S  F  T  V  P  L  V  F  L  I  K  C  R  L  I  I  V  F  F  L  K  K  K  </second_frame>
            <third_frame>   Q  L  T  Y  Q  E  F  H  I  F  A  M  W  G  A  V  T  Q  K  K  *  C  S  K  L  Y  R  L  W  V  H  L  L  G  L  L  P  I  D  L  E  S  L  N  P  I  L  P  S  P  *  F  R  E  N  P  F  S  Q  H  L  K  L  C  Y  C  R  L  L  N  Y  I  V  T  S  P  V  L  E  I  F  E  C  L  Q  L  I  Q  S  H  P  L  L  H  L  L  Q  S  S  Q  L :   E  T  F  A  R  S  T  S  A  S  F  A  G  A  Q  I  S  M  R  Y  L  M  V  K  K  R  *  E  L  S  A  L  I  V  G  R  L  H  M  R  I  Q  K  W  *  D  F  H  *  A  S  L  F  R  L  Y  S  *  L  N  A  D  *  S  L  Y  S  F  S  K  K  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C03HBa0013A17.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="91345" stop="91043"/>
                    <exon start="86054" stop="85839"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>519</number_coding_nucleotides>
                  <number_encoded_amino_acids>173</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TIDLPRVSHFCYVGSCYPEKIMLKAIQIVGSSSGFASYRFRKPQPNSAFSLISRKPILTTSETLLLPASQLHSHKSCFRDFRMSSTHSKSSSSSSVAVQSTGNIRKINFCQFCGGPNKHEIPDGEEKVRAICTHCGKITYENPKMVRFSLSFTVPLVFLIKCRLIIVFFLKKK</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="86177" e_stop="85831"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.991"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.991">
            <gDNA_exon_boundary e_start="86177" e_stop="85831" e_length="347"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="86177" stop="85831"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E229314" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGCCAATTTTTTTAAAATTCACCTTTATGTTATTTAAATAGATCTGAGAGCATTTTGTGTTTCATAAATTGTTCAGGTTCCTTTATCTTTTCCTTGATTGATTTCAGTTCAAAGATTTTGCAGGGAAACATTCGCAAGATCAACTTCTGCCAGTTTTGCGGGGGCCCAAATAAGCATGAGATACCTGATGGTGAAGAAAAGGTGAGAGCTATCTGCACTCATTGTGGGAAGATTACATATGAGAATCCAAAAATGGTAAGATTTTCATTAAGCTTCACTGTTCCGCTTGTATTCTTGATTAAATGCAGATTAATCATTGTATTCTTTCTCAAAAAAAAAAAAAACTC</gDNA_template>
            <first_frame> S  Q  F  F  *  N  S  P  L  C  Y  L  N  R  S  E  S  I  L  C  F  I  N  C  S  G  S  F  I  F  S  L  I  D  F  S  S  K  I  L  Q  G  N  I  R  K  I  N  F  C  Q  F  C  G  G  P  N  K  H  E  I  P  D  G  E  E  K  V  R  A  I  C  T  H  C  G  K  I  T  Y  E  N  P  K  M  V  R  F  S  L  S  F  T  V  P  L  V  F  L  I  K  C  R  L  I  I  V  F  F  L  K  K  K  K  N   </first_frame>
            <second_frame>  A  N  F  F  K  I  H  L  Y  V  I  *  I  D  L  R  A  F  C  V  S  *  I  V  Q  V  P  L  S  F  P  *  L  I  S  V  Q  R  F  C  R  E  T  F  A  R  S  T  S  A  S  F  A  G  A  Q  I  S  M  R  Y  L  M  V  K  K  R  *  E  L  S  A  L  I  V  G  R  L  H  M  R  I  Q  K  W  *  D  F  H  *  A  S  L  F  R  L  Y  S  *  L  N  A  D  *  S  L  Y  S  F  S  K  K  K  K  T  </second_frame>
            <third_frame>   P  I  F  L  K  F  T  F  M  L  F  K  *  I  *  E  H  F  V  F  H  K  L  F  R  F  L  Y  L  F  L  D  *  F  Q  F  K  D  F  A  G  K  H  S  Q  D  Q  L  L  P  V  L  R  G  P  K  *  A  *  D  T  *  W  *  R  K  G  E  S  Y  L  H  S  L  W  E  D  Y  I  *  E  S  K  N  G  K  I  F  I  K  L  H  C  S  A  C  I  L  D  *  M  Q  I  N  H  C  I  L  S  Q  K  K  K  K  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C03HBa0013A17.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="86162" stop="85833"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>330</number_coding_nucleotides>
                  <number_encoded_amino_acids>110</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NSPLCYLNRSESILCFINCSGSFIFSLIDFSSKILQGNIRKINFCQFCGGPNKHEIPDGEEKVRAICTHCGKITYENPKMVRFSLSFTVPLVFLIKCRLIIVFFLKKKKN</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="118838" PGL_stop="117444"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="118838" e_stop="118818"/>
            <exon e_start="118104" e_stop="117444"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.890" acc_prob="0.000" e_score="0.619"/>
          <exon-only e_score="0.913"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.619">
            <gDNA_exon_boundary e_start="118838" e_stop="118818" e_length="21"/>
          </exon>
          <intron i_serial="1" don_prob="0.890" acc_prob="0.000">
            <gDNA_intron_boundary i_start="118817" i_stop="118105" i_length="713"/>
          </intron>
          <exon e_serial="2" e_score="0.913">
            <gDNA_exon_boundary e_start="118104" e_stop="117444" e_length="661"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="118838" stop="118818"/>
              <exon start="118104" stop="117493"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E546563" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="117932" stop="117444"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E203362" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAGGCAAAGGCTTACCAAAAA : GGAAAATGTTATTTGTAGTTTTGATGATTTGACAAACTTAGGGACCTCATAAAGGTACTGGGTTTTCTACTTGAGTATTGCAGGTGTCTTGTTTGAAGTATTGCAGATGAAACAAACCCAGGGACCTTGTAGAGGTACCACGCTCTCATGATGATGAGCAAGTCGACTGCCAGCTGGAGACGGTACAGAAAGTAGGTGCACACTTCCCGATGGCGTCAGAAAAGTGTGACCTTTCTAGCCAATGGCAAAGAAGTTTAGGAAAGTGACTTGCCCATATAAAAGGCACTTTCCTAAACATTTGTGATTTTGTTTTTGCAACTTGATAAAAACTTTTCAAGAACTCTTGCAAAAGCTACACAAAGCAAAGGCAGAATTATTCCAAGAACAACAACAACATCTGGAGCTTATCATCTAGTTGTTTAGGAATTTATTCTCTTGTTCTTAAATTGTAAACCACTCCTAACTTTATAAAGGAATTGGTGTGTTGTGTTAGAAGTCTAGGTTGTCCAGGTGGGATAGCTTAGTGGGTAGATTGTTTTTCTACTTAGGCTTGTTGAGCAATAGAGGTCTATTGCTTAACGGTAAGATTGATAACTCTTTCTTACATTTGGTGTAATCGTGTTTTGCTTTTGCTTTTGAATATTAGCGAAAACGATTGAAA</gDNA_template>
            <first_frame> K  A  K  A  Y  Q  K  :  G  K  C  Y  L  *  F  *  *  F  D  K  L  R  D  L  I  K  V  L  G  F  L  L  E  Y  C  R  C  L  V  *  S  I  A  D  E  T  N  P  G  T  L  *  R  Y  H  A  L  M  M  M  S  K  S  T  A  S  W  R  R  Y  R  K  *  V  H  T  S  R  W  R  Q  K  S  V  T  F  L  A  N  G  K  E  V  *  E  S  D  L  P  I  *  K  A  L  S  *  T  F  V  I  L  F  L  Q  L  D  K  N  F  S  R  T  L  A  K  A  T  Q  S  K  G  R  I  I  P  R  T  T  T  T  S  G  A  Y  H  L  V  V  *  E  F  I  L  L  F  L  N  C  K  P  L  L  T  L  *  R  N  W  C  V  V  L  E  V  *  V  V  Q  V  G  *  L  S  G  *  I  V  F  L  L  R  L  V  E  Q  *  R  S  I  A  *  R  *  D  *  *  L  F  L  T  F  G  V  I  V  F  C  F  C  F  *  I  L  A  K  T  I  E  </first_frame>
            <second_frame>  R  Q  R  L  T  K  K :   E  N  V  I  C  S  F  D  D  L  T  N  L  G  T  S  *  R  Y  W  V  F  Y  L  S  I  A  G  V  L  F  E  V  L  Q  M  K  Q  T  Q  G  P  C  R  G  T  T  L  S  *  *  *  A  S  R  L  P  A  G  D  G  T  E  S  R  C  T  L  P  D  G  V  R  K  V  *  P  F  *  P  M  A  K  K  F  R  K  V  T  C  P  Y  K  R  H  F  P  K  H  L  *  F  C  F  C  N  L  I  K  T  F  Q  E  L  L  Q  K  L  H  K  A  K  A  E  L  F  Q  E  Q  Q  Q  H  L  E  L  I  I  *  L  F  R  N  L  F  S  C  S  *  I  V  N  H  S  *  L  Y  K  G  I  G  V  L  C  *  K  S  R  L  S  R  W  D  S  L  V  G  R  L  F  F  Y  L  G  L  L  S  N  R  G  L  L  L  N  G  K  I  D  N  S  F  L  H  L  V  *  S  C  F  A  F  A  F  E  Y  *  R  K  R  L  K </second_frame>
            <third_frame>   G  K  G  L  P  K   : R  K  M  L  F  V  V  L  M  I  *  Q  T  *  G  P  H  K  G  T  G  F  S  T  *  V  L  Q  V  S  C  L  K  Y  C  R  *  N  K  P  R  D  L  V  E  V  P  R  S  H  D  D  E  Q  V  D  C  Q  L  E  T  V  Q  K  V  G  A  H  F  P  M  A  S  E  K  C  D  L  S  S  Q  W  Q  R  S  L  G  K  *  L  A  H  I  K  G  T  F  L  N  I  C  D  F  V  F  A  T  *  *  K  L  F  K  N  S  C  K  S  Y  T  K  Q  R  Q  N  Y  S  K  N  N  N  N  I  W  S  L  S  S  S  C  L  G  I  Y  S  L  V  L  K  L  *  T  T  P  N  F  I  K  E  L  V  C  C  V  R  S  L  G  C  P  G  G  I  A  *  W  V  D  C  F  S  T  *  A  C  *  A  I  E  V  Y  C  L  T  V  R  L  I  T  L  S  Y  I  W  C  N  R  V  L  L  L  L  L  N  I  S  E  N  D  *   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C03HBa0013A17.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="135055" PGL_stop="133945"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="135055" e_stop="134551"/>
            <exon e_start="134480" e_stop="133945"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.917"/>
          <exon-only e_score="0.979"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.917">
            <gDNA_exon_boundary e_start="135055" e_stop="134551" e_length="505"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="134550" i_stop="134481" i_length="70"/>
          </intron>
          <exon e_serial="2" e_score="0.979">
            <gDNA_exon_boundary e_start="134480" e_stop="133945" e_length="536"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="135055" stop="134551"/>
              <exon start="134480" stop="134268"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349726" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="135055" stop="134655"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357559" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="134424" stop="134186"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E391780" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="134423" stop="133945"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246710" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAATCTTCGGTGGAGGTAGGTTATGGTTTTCATGCTTTCATAGTAAACTCTTAATAGAGAATGATATGCATTGGTACTATTGTAAACCCTGCTATGTGCTTAATTGTATGCATGCATGAACGTGATTATATAATTGTGATTATATTAAGCATGATGAAGTTATTGAATCCCAAATCTTGATAAAAACCTAATCTCTTTTTAATGATGATGCCTTGGTAAGGGAGAAGGCTTGATGAACTAAAGTAATGAGATTGATGATGCCTTGGTAAGAAAGAAGGCTTGATGAATTGATGGAAAGAGATTAGGGGATCGGGTGTCACGGACCGACACGTAGTATTAGGGGATCCGGTGTCACGAACCGACACGTAGTATTAGGGGATCGGGTGTCACGAACCGACACGTAGATTTAGGGGATCGGGTGTCACGAACCGACACGTAGAATTAGGGGATCGGGTGTCACGAACCGACACGTAGTATTAGGGGATCGGGTGTCACGAACCGACAC : GTAGATTTAGGGGATCGGGTGTCACGAACCGACACATAGATTTAGGGGATCGGGTGTCACGAACCGACACATAGATTTAGGGGATCGGAGTGTCACGTACCGACACAAGAGGATTAATGAATATTGAGGGAGCGGAGTGTCACGTACCGACACAAGAGAAATAAAGATAATGAATCTTGAAAGATGTTAATATACTCAATCTAATGAACATGATTCCCAAATGAGTATGGTATCGAGGCTTGAGTCCTCATGTGTGAACTTGACGGTAATTGTTAATGATATAGTATTTGTTGTTGCTACATGTTGAGTATCATAGTTGATTTTATGATATTACTTGGTATATATTGATTTCTATTTTGAGTTGGCCGATGATATCTACTCAGTACCCGTGTTTTGTACTGACCCCTACTTTTATGTTCTCTTCTTGTCTATTTGTGGAGTGCAGCAAACGTGCCATCGTCTTCAACTCAACAGTAATTCAAGCCAGTCTTACTACATCGGAAATTCAGGGTGAGCTAATGCTTCTAGCTTGGAAT</gDNA_template>
            <first_frame> E  S  S  V  E  V  G  Y  G  F  H  A  F  I  V  N  S  *  *  R  M  I  C  I  G  T  I  V  N  P  A  M  C  L  I  V  C  M  H  E  R  D  Y  I  I  V  I  I  L  S  M  M  K  L  L  N  P  K  S  *  *  K  P  N  L  F  L  M  M  M  P  W  *  G  R  R  L  D  E  L  K  *  *  D  *  *  C  L  G  K  K  E  G  L  M  N  *  W  K  E  I  R  G  S  G  V  T  D  R  H  V  V  L  G  D  P  V  S  R  T  D  T  *  Y  *  G  I  G  C  H  E  P  T  R  R  F  R  G  S  G  V  T  N  R  H  V  E  L  G  D  R  V  S  R  T  D  T  *  Y  *  G  I  G  C  H  E  P  T   : R  R  F  R  G  S  G  V  T  N  R  H  I  D  L  G  D  R  V  S  R  T  D  T  *  I  *  G  I  G  V  S  R  T  D  T  R  G  L  M  N  I  E  G  A  E  C  H  V  P  T  Q  E  K  *  R  *  *  I  L  K  D  V  N  I  L  N  L  M  N  M  I  P  K  *  V  W  Y  R  G  L  S  P  H  V  *  T  *  R  *  L  L  M  I  *  Y  L  L  L  L  H  V  E  Y  H  S  *  F  Y  D  I  T  W  Y  I  L  I  S  I  L  S  W  P  M  I  S  T  Q  Y  P  C  F  V  L  T  P  T  F  M  F  S  S  C  L  F  V  E  C  S  K  R  A  I  V  F  N  S  T  V  I  Q  A  S  L  T  T  S  E  I  Q  G  E  L  M  L  L  A  W  N </first_frame>
            <second_frame>  N  L  R  W  R  *  V  M  V  F  M  L  S  *  *  T  L  N  R  E  *  Y  A  L  V  L  L  *  T  L  L  C  A  *  L  Y  A  C  M  N  V  I  I  *  L  *  L  Y  *  A  *  *  S  Y  *  I  P  N  L  D  K  N  L  I  S  F  *  *  *  C  L  G  K  G  E  G  L  M  N  *  S  N  E  I  D  D  A  L  V  R  K  K  A  *  *  I  D  G  K  R  L  G  D  R  V  S  R  T  D  T  *  Y  *  G  I  R  C  H  E  P  T  R  S  I  R  G  S  G  V  T  N  R  H  V  D  L  G  D  R  V  S  R  T  D  T  *  N  *  G  I  G  C  H  E  P  T  R  S  I  R  G  S  G  V  T  N  R  H  :  V  D  L  G  D  R  V  S  R  T  D  T  *  I  *  G  I  G  C  H  E  P  T  H  R  F  R  G  S  E  C  H  V  P  T  Q  E  D  *  *  I  L  R  E  R  S  V  T  Y  R  H  K  R  N  K  D  N  E  S  *  K  M  L  I  Y  S  I  *  *  T  *  F  P  N  E  Y  G  I  E  A  *  V  L  M  C  E  L  D  G  N  C  *  *  Y  S  I  C  C  C  Y  M  L  S  I  I  V  D  F  M  I  L  L  G  I  Y  *  F  L  F  *  V  G  R  *  Y  L  L  S  T  R  V  L  Y  *  P  L  L  L  C  S  L  L  V  Y  L  W  S  A  A  N  V  P  S  S  S  T  Q  Q  *  F  K  P  V  L  L  H  R  K  F  R  V  S  *  C  F  *  L  G   </second_frame>
            <third_frame>   I  F  G  G  G  R  L  W  F  S  C  F  H  S  K  L  L  I  E  N  D  M  H  W  Y  Y  C  K  P  C  Y  V  L  N  C  M  H  A  *  T  *  L  Y  N  C  D  Y  I  K  H  D  E  V  I  E  S  Q  I  L  I  K  T  *  S  L  F  N  D  D  A  L  V  R  E  K  A  *  *  T  K  V  M  R  L  M  M  P  W  *  E  R  R  L  D  E  L  M  E  R  D  *  G  I  G  C  H  G  P  T  R  S  I  R  G  S  G  V  T  N  R  H  V  V  L  G  D  R  V  S  R  T  D  T  *  I  *  G  I  G  C  H  E  P  T  R  R  I  R  G  S  G  V  T  N  R  H  V  V  L  G  D  R  V  S  R  T  D  T :   *  I  *  G  I  G  C  H  E  P  T  H  R  F  R  G  S  G  V  T  N  R  H  I  D  L  G  D  R  S  V  T  Y  R  H  K  R  I  N  E  Y  *  G  S  G  V  S  R  T  D  T  R  E  I  K  I  M  N  L  E  R  C  *  Y  T  Q  S  N  E  H  D  S  Q  M  S  M  V  S  R  L  E  S  S  C  V  N  L  T  V  I  V  N  D  I  V  F  V  V  A  T  C  *  V  S  *  L  I  L  *  Y  Y  L  V  Y  I  D  F  Y  F  E  L  A  D  D  I  Y  S  V  P  V  F  C  T  D  P  Y  F  Y  V  L  F  L  S  I  C  G  V  Q  Q  T  C  H  R  L  Q  L  N  S  N  S  S  Q  S  Y  Y  I  G  N  S  G  *  A  N  A  S  S  L  E  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C03HBa0013A17.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="134160" stop="133945"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>216</number_coding_nucleotides>
                  <number_encoded_amino_acids>72</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FYDITWYILISILSWPMISTQYPCFVLTPTFMFSSCLFVECSKRAIVFNSTVIQASLTTSEIQGELMLLAWN</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="134097" PGL_stop="134434"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="134097" e_stop="134434"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.911"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.911">
            <gDNA_exon_boundary e_start="134097" e_stop="134434" e_length="338"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="134097" stop="134434"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357033" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACTGAGTAGATATCATCGGCCAACTCAAAATAGAAATCAATATATACCAAGTAATATCATAAAATCAACTATGATACTCAACATGTAGCAACAACAAATACTATATCATTAACAATTACCGTCAAGTTCACACATGAGGACTCAAGCCTCGATACCATACTCATTTGGGAATCATGTTCATTAGATTGAGTATATTAACATCTTTCAAGATTCATTATCTTTATTTCTCTTGTGTCGGTACGTGACACTCCGCTCCCTCAATATTCATTAATCCTCTTGTGTCGGTACGTGACACTCCGATCCCCTAAATCTATGTGTCGGTTCGTGACACCCGATCC</gDNA_template>
            <first_frame> T  E  *  I  S  S  A  N  S  K  *  K  S  I  Y  T  K  *  Y  H  K  I  N  Y  D  T  Q  H  V  A  T  T  N  T  I  S  L  T  I  T  V  K  F  T  H  E  D  S  S  L  D  T  I  L  I  W  E  S  C  S  L  D  *  V  Y  *  H  L  S  R  F  I  I  F  I  S  L  V  S  V  R  D  T  P  L  P  Q  Y  S  L  I  L  L  C  R  Y  V  T  L  R  S  P  K  S  M  C  R  F  V  T  P  D   </first_frame>
            <second_frame>  L  S  R  Y  H  R  P  T  Q  N  R  N  Q  Y  I  P  S  N  I  I  K  S  T  M  I  L  N  M  *  Q  Q  Q  I  L  Y  H  *  Q  L  P  S  S  S  H  M  R  T  Q  A  S  I  P  Y  S  F  G  N  H  V  H  *  I  E  Y  I  N  I  F  Q  D  S  L  S  L  F  L  L  C  R  Y  V  T  L  R  S  L  N  I  H  *  S  S  C  V  G  T  *  H  S  D  P  L  N  L  C  V  G  S  *  H  P  I  </second_frame>
            <third_frame>   *  V  D  I  I  G  Q  L  K  I  E  I  N  I  Y  Q  V  I  S  *  N  Q  L  *  Y  S  T  C  S  N  N  K  Y  Y  I  I  N  N  Y  R  Q  V  H  T  *  G  L  K  P  R  Y  H  T  H  L  G  I  M  F  I  R  L  S  I  L  T  S  F  K  I  H  Y  L  Y  F  S  C  V  G  T  *  H  S  A  P  S  I  F  I  N  P  L  V  S  V  R  D  T  P  I  P  *  I  Y  V  S  V  R  D  T  R  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C03HBa0013A17.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 192 chains have been computed
$ 
$ memory statistics:
$ 104520 bytes spliced alignments in total
$ 35 spliced alignments have been stored
$ 2986 bytes was the average size of a spliced alignment
$ 12472 bytes predicted gene locations in total
$ 6 predicted gene locations have been stored
$ 2078 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 237 backtrace matrices have been allocated
$ 
$ date finished: 2009-12-01 01:39:01
-->
