psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 1608 3 0 0 5 5 12 14120 - SGN-U562959 1622 6 1622 C03HBa0203C09.1 112639 83760 99491 18 32,238,29,78,6,57,40,89,87,48,113,44,13,129,152,254,144,58, 0,32,271,300,379,385,442,483,572,659,707,821,865,879,1008,1160,1414,1558, 83760,83793,84031,84150,84228,87456,87619,87659,90544,90714,91067,91180,91864,91877,92253,96902,97495,99433, 790 5 0 0 0 0 0 0 + SGN-U563709 795 0 795 C03HBa0203C09.1 112639 6254 7049 1 795, 0, 6254, 835 5 0 0 1 1 7 2220 - SGN-U565368 843 1 842 C03HBa0203C09.1 112639 18428 21488 8 40,66,66,78,249,191,145,5, 1,41,107,173,251,500,691,837, 18428,18619,19108,20353,20564,21144,21336,21483, 1624 5 0 0 0 0 7 3788 + SGN-U565369 1632 3 1632 C03HBa0203C09.1 112639 16064 21481 8 284,99,120,66,66,78,771,145, 3,287,386,506,572,638,716,1487, 16064,17074,18348,18619,19108,20353,20564,21336, 32 1 0 0 0 0 0 0 - SGN-U576657 1506 1469 1502 C03HBa0203C09.1 112639 10865 10898 1 33, 4, 10865, 1856 1 0 0 0 0 13 3036 - SGN-U576884 1857 0 1857 C03HBa0203C09.1 112639 8328 13221 14 325,80,69,201,123,61,178,79,122,83,152,139,75,170, 0,325,405,474,675,798,859,1037,1116,1238,1321,1473,1612,1687, 8328,8843,9532,10054,10412,10707,11039,11380,11585,11826,11999,12437,12819,13051, 52 3 0 0 0 0 0 0 + SGN-U580099 728 184 239 C03HBa0203C09.1 112639 89405 89460 1 55, 184, 89405, 35 0 0 0 0 0 1 11 + SGN-U582117 833 112 147 C03HBa0203C09.1 112639 10874 10920 2 23,12, 112,135, 10874,10908, 309 1 0 0 0 0 0 0 - SGN-U582955 2321 2011 2321 C03HBa0203C09.1 112639 112329 112639 1 310, 0, 112329, 602 5 0 0 1 6 2 4 + SGN-U582973 616 3 616 C03HBa0203C09.1 112639 110481 111092 3 35,545,27, 3,44,589, 110481,110519,111065, 774 0 0 0 0 0 3 4300 + SGN-U583090 774 0 774 C03HBa0203C09.1 112639 36042 41116 4 527,30,151,66, 0,527,557,708, 36042,37386,40754,41050, 1123 4 0 0 0 0 8 4496 + SGN-U583092 1127 0 1127 C03HBa0203C09.1 112639 40764 46387 9 141,122,75,225,45,45,30,120,324, 0,141,263,338,563,608,653,683,803, 40764,41050,43019,44062,44402,45528,45660,45830,46063, 51 0 0 0 1 32 1 31 + SGN-U584424 1314 1120 1203 C03HBa0203C09.1 112639 91435 91517 2 16,35, 1120,1168, 91435,91482, 767 4 0 0 0 0 3 1199 - SGN-U584632 775 4 775 C03HBa0203C09.1 112639 13432 15402 4 147,304,176,144, 0,147,451,627, 13432,13667,14143,15258, 167 0 0 0 0 0 2 1196 + SGN-U588222 321 1 168 C03HBa0203C09.1 112639 44212 45575 3 75,45,47, 1,76,121, 44212,44402,45528, 871 3 0 0 0 0 3 5366 + SGN-U588223 874 0 874 C03HBa0203C09.1 112639 37374 43614 4 42,418,406,8, 0,42,460,866, 37374,40754,43019,43606, 565 6 0 0 0 0 0 0 + SGN-U588533 571 0 571 C03HBa0203C09.1 112639 5524 6095 1 571, 0, 5524, 709 4 0 0 2 3 4 1646 - SGN-U588579 756 40 756 C03HBa0203C09.1 112639 19122 21481 6 43,9,78,249,189,145, 0,44,53,131,382,571, 19122,19165,20353,20564,21146,21336, 89 0 0 0 3 24 3 20 + SGN-U597269 790 1 114 C03HBa0203C09.1 112639 110463 110572 5 53,11,13,7,5, 1,54,82,99,109, 110463,110519,110540,110560,110567, 378 10 0 0 1 1 1 2 + SGN-U598050 389 0 389 C03HBa0203C09.1 112639 33987 34377 2 297,91, 0,298, 33987,34286, 592 45 0 5 3 27 6 9789 + SGN-U598426 671 2 671 C03HBa0203C09.1 112639 60428 70859 8 122,94,76,81,131,109,12,17, 2,124,218,295,376,507,637,654, 60428,61815,61910,61986,68209,69787,70824,70842, 559 47 0 2 0 0 2 9224 + SGN-U598426 671 8 616 C03HBa0203C09.1 112639 65861 75693 3 210,321,77, 8,218,539, 65861,72564,75616, 272 0 0 8 0 0 0 0 - SGN-U599822 280 0 280 C03HBa0203C09.1 112639 14322 14602 1 280, 0, 14322, 297 0 0 0 0 0 0 0 - SGN-U602268 297 0 297 C03HBa0203C09.1 112639 83430 83727 1 297, 0, 83430,