psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 33 0 0 0 1 1 0 0 + SGN-U562880 1706 1608 1642 C03HBa0157P11.1 116570 103801 103834 2 9,24, 1608,1618, 103801,103810, 858 13 0 0 0 0 3 1191 - SGN-U562924 887 16 887 C03HBa0157P11.1 116570 64935 66997 4 242,219,243,167, 0,242,461,704, 64935,66060,66501,66830, 754 2 0 11 0 0 4 1213 - SGN-U563514 767 0 767 C03HBa0157P11.1 116570 81357 83337 5 69,87,99,111,401, 0,69,156,255,366, 81357,81594,81848,82270,82936, 1738 2 0 0 1 4 4 3041 - SGN-U565344 1744 0 1744 C03HBa0157P11.1 116570 29524 34305 5 125,760,263,148,444, 0,129,889,1152,1300, 29524,29650,30548,33448,33861, 1434 0 0 0 0 0 4 996 - SGN-U566776 1443 9 1443 C03HBa0157P11.1 116570 113588 116018 5 733,117,369,63,152, 0,733,850,1219,1282, 113588,114829,115257,115725,115866, 1092 0 0 0 0 0 0 0 - SGN-U566778 1096 4 1096 C03HBa0157P11.1 116570 113856 114948 1 1092, 0, 113856, 675 2 0 6 1 3 3 414 - SGN-U566779 686 0 686 C03HBa0157P11.1 116570 114931 116028 4 15,96,269,303, 0,15,114,383, 114931,115257,115357,115725, 1127 0 0 0 0 0 3 1464 - SGN-U568524 1127 0 1127 C03HBa0157P11.1 116570 7865 10456 4 11,566,138,412, 0,11,577,715, 7865,7877,9767,10044, 1252 0 0 0 0 0 4 1049 - SGN-U569117 1422 1 1253 C03HBa0157P11.1 116570 0 2301 5 285,107,141,141,578, 169,454,561,702,843, 0,371,1271,1496,1723, 610 0 0 0 0 0 1 68 - SGN-U569673 610 0 610 C03HBa0157P11.1 116570 55822 56500 2 355,255, 0,355, 55822,56245, 30 0 0 0 0 0 0 0 - SGN-U569831 1339 1220 1250 C03HBa0157P11.1 116570 103804 103834 1 30, 89, 103804, 38 0 0 0 0 0 2 5 + SGN-U570647 2159 1992 2030 C03HBa0157P11.1 116570 11743 11786 3 4,7,27, 1992,1996,2003, 11743,11748,11759, 1357 0 0 0 0 0 6 1511 - SGN-U574388 1358 1 1358 C03HBa0157P11.1 116570 12878 15746 7 524,161,189,96,129,180,78, 0,524,685,874,970,1099,1279, 12878,13533,13960,14928,15125,15357,15668, 31 1 0 0 0 0 0 0 - SGN-U574658 941 786 818 C03HBa0157P11.1 116570 41157 41189 1 32, 123, 41157, 1558 0 0 0 0 0 4 5095 + SGN-U575733 1559 1 1559 C03HBa0157P11.1 116570 105982 112635 5 754,58,84,142,520, 1,755,813,897,1039, 105982,110704,110855,111049,112115, 36 0 0 0 1 1 0 0 - SGN-U576771 1591 1183 1220 C03HBa0157P11.1 116570 103803 103839 2 29,7, 371,401, 103803,103832, 81 5 0 0 0 0 0 0 - SGN-U577374 1694 1543 1629 C03HBa0157P11.1 116570 5365 5451 1 86, 65, 5365, 1885 1 0 0 0 0 10 9014 + SGN-U579212 1886 0 1886 C03HBa0157P11.1 116570 44638 55538 11 385,69,93,119,196,176,130,161,92,109,356, 0,385,454,547,666,862,1038,1168,1329,1421,1530, 44638,45573,46020,47273,48152,49809,51436,52154,53446,54700,55182, 50 0 0 0 0 0 0 0 - SGN-U579636 800 458 508 C03HBa0157P11.1 116570 22727 22777 1 50, 292, 22727, 32 1 0 0 0 0 0 0 + SGN-U580004 2558 8 41 C03HBa0157P11.1 116570 12854 12887 1 33, 8, 12854, 1536 0 0 0 1 1 11 2863 - SGN-U580074 1537 0 1537 C03HBa0157P11.1 116570 18426 22825 13 15,44,70,110,169,116,121,178,159,114,180,156,104, 0,16,60,130,240,409,525,646,824,983,1097,1277,1433, 18426,18441,18957,19114,19324,19736,20005,20253,20552,21931,22172,22453,22721, 31 0 0 0 0 0 0 0 + SGN-U581432 1832 480 511 C03HBa0157P11.1 116570 12854 12885 1 31, 480, 12854, 218 0 0 0 0 0 0 0 + SGN-U581515 837 619 837 C03HBa0157P11.1 116570 44776 44994 1 218, 619, 44776, 30 0 0 0 0 0 0 0 + SGN-U582591 663 628 658 C03HBa0157P11.1 116570 41161 41191 1 30, 628, 41161, 729 0 0 7 4 7 7 1485 + SGN-U582687 743 0 743 C03HBa0157P11.1 116570 57134 59355 9 303,100,154,59,74,7,5,20,14, 0,303,403,557,617,694,702,707,729, 57134,58024,58297,59104,59163,59241,59250,59318,59341, 1542 1 0 0 1 1 8 5652 + SGN-U582689 1544 0 1544 C03HBa0157P11.1 116570 57134 64329 10 303,100,154,151,149,101,158,115,290,22, 0,303,403,557,708,857,958,1116,1231,1522, 57134,58024,58297,59104,59318,60211,60410,63801,64017,64307, 35 0 0 0 0 0 0 0 + SGN-U585050 795 713 748 C03HBa0157P11.1 116570 41156 41191 1 35, 713, 41156, 1575 0 0 0 0 0 5 1102 - SGN-U585939 1580 0 1575 C03HBa0157P11.1 116570 100357 103034 6 288,86,106,258,191,646, 5,293,379,485,743,934, 100357,100741,101081,101340,101736,102388, 1421 0 0 0 0 0 4 2174 + SGN-U586056 1421 0 1421 C03HBa0157P11.1 116570 40598 44193 5 479,121,221,174,426, 0,479,600,821,995, 40598,41215,42090,42605,43767, 696 1 0 13 6 21 4 1479 + SGN-U587211 801 1 732 C03HBa0157P11.1 116570 7974 10163 9 469,106,16,8,5,43,28,20,15, 1,470,577,594,609,615,658,687,717, 7974,9767,9873,9889,10042,10047,10091,10119,10148, 166 7 0 0 1 1 2 139 + SGN-U587379 199 25 199 C03HBa0157P11.1 116570 40968 41280 4 43,4,61,65, 25,69,73,134, 40968,41011,41016,41215, 542 0 0 0 0 0 0 0 + SGN-U587380 548 1 543 C03HBa0157P11.1 116570 40795 41337 1 542, 1, 40795, 130 2 0 0 0 0 1 508 - SGN-U589413 158 0 132 C03HBa0157P11.1 116570 114285 114925 2 36,96, 26,62, 114285,114829, 609 5 0 1 1 1 1 1 - SGN-U595248 616 0 616 C03HBa0157P11.1 116570 101922 102538 3 49,525,41, 0,49,575, 101922,101972,102497, 351 22 0 0 1 7 2 636 - SGN-U595701 380 0 380 C03HBa0157P11.1 116570 15362 16371 3 177,102,94, 0,184,286, 15362,15677,16277, 863 0 0 0 0 0 2 267 - SGN-U595702 868 5 868 C03HBa0157P11.1 116570 12975 14105 3 69,649,145, 0,69,718, 12975,13045,13960, 333 10 0 166 0 0 0 0 + SGN-U601053 584 1 510 C03HBa0157P11.1 116570 88010 88519 1 509, 1, 88010, 35 0 0 0 1 1 0 0 - SGN-U602621 549 281 317 C03HBa0157P11.1 116570 103801 103836 2 31,4, 232,264, 103801,103832,