psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 654 2 0 0 1 2 1 1 + SGN-U563989 658 0 658 C03HBa0046F15.1 144289 125174 125831 2 634,22, 0,636, 125174,125809, 1594 0 0 0 0 0 3 2477 + SGN-U563990 1604 10 1604 C03HBa0046F15.1 144289 125065 129136 4 353,445,116,680, 10,363,808,924, 125065,126423,127043,128456, 316 18 0 0 0 0 0 0 + SGN-U564556 582 248 582 C03HBa0046F15.1 144289 21285 21619 1 334, 248, 21285, 706 0 0 0 0 0 1 136 + SGN-U565680 711 5 711 C03HBa0046F15.1 144289 69578 70420 2 114,592, 5,119, 69578,69828, 1066 3 0 0 1 1 0 0 - SGN-U566537 1071 1 1071 C03HBa0046F15.1 144289 1987 3056 2 196,873, 0,197, 1987,2183, 419 32 0 0 0 0 0 0 - SGN-U566782 452 1 452 C03HBa0046F15.1 144289 70497 70948 1 451, 0, 70497, 1595 0 0 0 0 0 8 4772 - SGN-U567390 1595 0 1595 C03HBa0046F15.1 144289 86827 93194 9 646,109,59,107,157,60,129,48,280, 0,646,755,814,921,1078,1138,1267,1315, 86827,88046,88807,88989,89756,91292,91552,92751,92914, 30 0 0 0 0 0 0 0 + SGN-U567442 875 724 754 C03HBa0046F15.1 144289 56213 56243 1 30, 724, 56213, 1570 9 0 0 1 1 4 573 - SGN-U568012 1580 0 1580 C03HBa0046F15.1 144289 102774 104926 6 374,348,289,407,51,110, 0,374,723,1012,1419,1470, 102774,103326,103674,104049,104654,104816, 2006 1 0 0 0 0 14 4718 + SGN-U568819 2025 0 2007 C03HBa0046F15.1 144289 35967 42692 15 31,96,129,83,231,133,108,132,57,98,59,112,101,631,6, 0,31,127,256,339,570,703,811,943,1000,1098,1157,1269,1370,2001, 35967,36083,38064,38313,38488,38953,39165,39914,40772,40949,41250,41409,41636,42054,42686, 1257 9 0 0 0 0 6 2334 - SGN-U568911 1267 1 1267 C03HBa0046F15.1 144289 105303 108903 7 39,459,44,55,45,90,534, 0,39,498,542,597,642,732, 105303,105415,105978,106149,106338,107162,108369, 284 2 0 0 0 0 0 0 + SGN-U571569 1329 692 978 C03HBa0046F15.1 144289 53896 54182 1 286, 692, 53896, 795 1 0 11 1 1 7 5148 + SGN-U572182 836 4 812 C03HBa0046F15.1 144289 25312 31267 8 152,79,83,150,116,106,71,50, 4,156,235,318,468,584,690,762, 25312,26361,28096,28328,29120,30217,31072,31217, 730 1 0 0 0 0 2 2 - SGN-U572327 731 0 731 C03HBa0046F15.1 144289 141876 142609 3 15,34,682, 0,15,49, 141876,141892,141927, 1181 0 0 0 2 2 4 861 - SGN-U577682 1184 0 1183 C03HBa0046F15.1 144289 129596 131638 7 327,62,142,218,318,93,21, 1,328,390,532,750,1069,1163, 129596,130048,130212,130875,131206,131524,131617, 54 2 0 0 1 3 1 4 + SGN-U577813 883 603 662 C03HBa0046F15.1 144289 64321 64381 2 48,8, 603,654, 64321,64373, 37 2 0 0 0 0 0 0 + SGN-U577813 883 612 651 C03HBa0046F15.1 144289 56715 56754 1 39, 612, 56715, 367 1 0 0 0 0 1 677 + SGN-U577817 827 0 368 C03HBa0046F15.1 144289 74113 75158 2 140,228, 0,140, 74113,74930, 3267 4 0 90 0 0 0 0 + SGN-U578053 3361 0 3361 C03HBa0046F15.1 144289 73856 77217 1 3361, 0, 73856, 167 7 0 0 0 0 1 113 - SGN-U578114 615 441 615 C03HBa0046F15.1 144289 130947 131234 2 146,28, 0,146, 130947,131206, 1655 0 0 0 1 16 12 1874 - SGN-U579211 1678 0 1671 C03HBa0046F15.1 144289 75534 79063 13 347,51,117,75,69,32,79,42,52,80,386,308,17, 7,354,405,522,597,666,698,777,819,871,951,1337,1661, 75534,75984,76118,76317,76637,76785,76894,77043,77164,77295,77503,78723,79046, 1030 2 0 0 0 0 4 439 + SGN-U579568 1280 1 1033 C03HBa0046F15.1 144289 63525 64996 5 374,182,112,62,302, 1,375,557,669,731, 63525,63973,64259,64551,64694, 568 0 0 0 0 0 2 811 + SGN-U579607 568 0 568 C03HBa0046F15.1 144289 56299 57678 3 182,94,292, 0,182,276, 56299,56662,57386, 36 2 0 0 0 0 0 0 + SGN-U579618 1043 692 730 C03HBa0046F15.1 144289 56700 56738 1 38, 692, 56700, 46 2 0 0 0 0 0 0 + SGN-U580109 764 210 258 C03HBa0046F15.1 144289 64321 64369 1 48, 210, 64321, 37 2 0 0 0 0 0 0 + SGN-U580109 764 219 258 C03HBa0046F15.1 144289 56715 56754 1 39, 219, 56715, 793 1 0 0 1 1 2 76 - SGN-U580231 795 0 795 C03HBa0046F15.1 144289 111065 111935 4 8,63,263,460, 0,8,71,335, 111065,111074,111212,111475, 708 0 0 3 1 1 2 115 - SGN-U580267 721 9 721 C03HBa0046F15.1 144289 130879 131705 3 18,194,499, 0,19,213, 130879,130899,131206, 1062 0 0 0 0 0 2 360 - SGN-U580443 1132 45 1107 C03HBa0046F15.1 144289 110519 111941 3 618,251,193, 25,643,894, 110519,111212,111748, 789 0 0 0 0 0 2 1226 + SGN-U581063 1228 438 1227 C03HBa0046F15.1 144289 0 2015 3 180,57,552, 438,618,675, 0,1144,1463, 32 1 0 0 0 0 0 0 + SGN-U581524 842 443 476 C03HBa0046F15.1 144289 56705 56738 1 33, 443, 56705, 833 2 0 0 0 0 4 578 - SGN-U582387 869 34 869 C03HBa0046F15.1 144289 18687 20100 5 149,103,89,203,291, 0,149,252,341,544, 18687,18942,19173,19340,19809, 35 0 0 0 1 5 0 0 + SGN-U583176 720 98 138 C03HBa0046F15.1 144289 12537 12572 2 6,29, 98,109, 12537,12543, 978 1 0 0 0 0 5 3398 - SGN-U585767 979 0 979 C03HBa0046F15.1 144289 13327 17704 6 531,108,85,86,82,87, 0,531,639,724,810,892, 13327,14974,15166,16073,17433,17617, 1763 1 0 0 0 0 13 6553 - SGN-U586171 1765 1 1765 C03HBa0046F15.1 144289 115379 123696 14 383,38,68,91,66,113,334,68,80,38,191,142,64,88, 0,383,421,489,580,646,759,1093,1161,1241,1279,1470,1612,1676, 115379,115901,116665,116843,118346,118511,118846,119847,121089,121245,122812,123215,123446,123608, 514 1 0 12 0 0 2 301 - SGN-U586865 607 0 527 C03HBa0046F15.1 144289 122811 123639 3 192,142,193, 80,272,414, 122811,123215,123446, 428 25 0 0 3 16 2 407 - SGN-U587974 624 0 469 C03HBa0046F15.1 144289 20934 21794 4 80,14,124,235, 155,236,263,389, 20934,21028,21042,21559, 240 7 0 0 0 0 0 0 - SGN-U589131 247 0 247 C03HBa0046F15.1 144289 70703 70950 1 247, 0, 70703, 885 1 0 0 0 0 0 0 - SGN-U589536 887 1 887 C03HBa0046F15.1 144289 9026 9912 1 886, 0, 9026, 226 3 0 0 4 5 6 10 - SGN-U590737 234 0 234 C03HBa0046F15.1 144289 78808 79047 8 12,14,4,12,34,128,6,19, 0,12,26,30,43,78,207,215, 78808,78821,78836,78841,78855,78889,79019,79028, 715 1 0 0 2 2 0 0 + SGN-U591913 719 1 719 C03HBa0046F15.1 144289 63625 64341 3 608,18,90, 1,610,629, 63625,64233,64251, 669 0 0 0 0 0 0 0 - SGN-U592184 669 0 669 C03HBa0046F15.1 144289 110698 111367 1 669, 0, 110698, 36 2 0 0 0 0 0 0 - SGN-U592947 566 352 390 C03HBa0046F15.1 144289 56700 56738 1 38, 176, 56700, 32 1 0 0 0 0 0 0 + SGN-U593495 873 494 527 C03HBa0046F15.1 144289 56705 56738 1 33, 494, 56705, 301 0 0 0 1 1 1 73 - SGN-U594349 307 1 303 C03HBa0046F15.1 144289 105101 105475 3 10,231,60, 4,15,246, 105101,105111,105415, 736 6 0 0 0 0 1 115 + SGN-U595483 743 1 743 C03HBa0046F15.1 144289 41398 42255 2 123,619, 1,124, 41398,41636, 506 0 0 1 0 0 0 0 - SGN-U597419 508 1 508 C03HBa0046F15.1 144289 97609 98116 1 507, 0, 97609, 424 0 0 0 0 0 0 0 - SGN-U597922 424 0 424 C03HBa0046F15.1 144289 17953 18377 1 424, 0, 17953, 43 1 0 0 0 0 2 26 + SGN-U598717 609 350 394 C03HBa0046F15.1 144289 110665 110735 3 12,24,8, 350,362,386, 110665,110689,110727, 55 0 0 0 1 172 3 79775 - SGN-U599849 589 247 474 C03HBa0046F15.1 144289 30882 110712 4 4,22,11,18, 115,119,313,324, 30882,30887,110635,110694, 410 0 0 0 0 0 2 382 - SGN-U599904 411 1 411 C03HBa0046F15.1 144289 83920 84712 3 40,100,270, 0,40,140, 83920,84054,84442, 673 8 0 0 1 2 4 743 + SGN-U601695 684 1 684 C03HBa0046F15.1 144289 67100 68524 5 146,81,115,255,84, 1,149,230,345,600, 67100,67247,67995,68184,68440, 40 2 0 0 0 0 1 19 - SGN-U602987 243 71 113 C03HBa0046F15.1 144289 110675 110736 2 34,8, 130,164, 110675,110728, 45 0 0 0 1 51 2 56 - SGN-U604544 663 391 487 C03HBa0046F15.1 144289 110635 110736 3 13,21,11, 176,189,261, 110635,110689,110725,