psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 2575 7 0 0 0 0 9 5103 - SGN-U562914 2589 0 2582 C03HBa0031M05.1 163724 50346 58031 10 596,980,86,201,105,54,45,137,212,166, 7,603,1583,1669,1870,1975,2029,2074,2211,2423, 50346,51038,53014,53347,53638,54396,54549,54809,55224,57865, 855 4 0 0 1 1 3 486 - SGN-U564200 860 0 860 C03HBa0031M05.1 163724 61306 62651 5 446,386,5,5,17, 0,446,832,838,843, 61306,62236,62623,62628,62634, 1788 4 0 0 0 0 4 4592 - SGN-U564754 1805 13 1805 C03HBa0031M05.1 163724 142257 148641 5 142,229,219,1038,164, 0,142,371,590,1628, 142257,142401,144996,146977,148477, 890 6 0 0 3 5 6 3571 - SGN-U565341 901 0 901 C03HBa0031M05.1 163724 65320 69787 8 193,4,37,112,122,122,195,111, 0,193,198,235,347,469,593,790, 65320,65514,65518,66116,66782,67723,69480,69676, 1129 8 0 59 1 1 2 1427 + SGN-U566251 1229 32 1229 C03HBa0031M05.1 163724 16375 18998 4 282,192,705,17, 32,314,506,1212, 16375,17425,18276,18981, 1904 5 0 0 0 0 9 5466 + SGN-U567121 1909 0 1909 C03HBa0031M05.1 163724 39771 47146 10 380,220,222,192,111,82,104,176,137,285, 0,380,600,822,1014,1125,1207,1311,1487,1624, 39771,40728,41616,42010,42284,42531,43340,43573,44835,46861, 52 2 0 0 0 0 0 0 + SGN-U567208 578 139 193 C03HBa0031M05.1 163724 105176 105230 1 54, 139, 105176, 1313 1 0 0 0 0 3 1251 - SGN-U568414 1319 5 1319 C03HBa0031M05.1 163724 110716 113281 4 607,532,115,60, 0,607,1139,1254, 110716,112399,113009,113221, 751 1 0 0 1 1 1 3054 + SGN-U569168 759 6 759 C03HBa0031M05.1 163724 83884 87690 3 223,427,102, 6,229,657, 83884,87161,87588, 715 2 0 0 0 0 7 971 - SGN-U569486 718 1 718 C03HBa0031M05.1 163724 78524 80212 8 77,51,60,78,40,185,206,20, 0,77,128,188,266,306,491,697, 78524,78722,78871,79043,79468,79599,79890,80192, 474 0 0 0 0 0 0 0 + SGN-U570230 813 0 474 C03HBa0031M05.1 163724 4716 5190 1 474, 0, 4716, 2599 2 0 0 0 0 17 16549 - SGN-U570455 2601 0 2601 C03HBa0031M05.1 163724 121227 140377 18 394,75,168,45,132,99,93,185,253,108,55,152,95,116,127,97,169,238, 0,394,469,637,682,814,913,1006,1191,1444,1552,1607,1759,1854,1970,2097,2194,2363, 121227,121722,121893,122513,122655,125164,126926,129057,130178,130850,131031,132677,132921,138373,138575,138948,139750,140139, 883 5 0 0 0 0 6 605 + SGN-U572901 889 1 889 C03HBa0031M05.1 163724 159184 160677 7 32,16,17,11,7,21,784, 1,33,49,66,77,84,105, 159184,159217,159234,159252,159265,159273,159893, 1065 6 0 1 0 0 6 2304 - SGN-U573643 1072 0 1072 C03HBa0031M05.1 163724 92477 95853 7 393,173,58,90,58,120,180, 0,393,566,624,714,772,892, 92477,92959,93255,93738,93913,94200,95673, 1019 3 0 0 0 0 1 994 - SGN-U573700 1038 1 1023 C03HBa0031M05.1 163724 97190 99206 2 569,453, 15,584, 97190,98753, 755 0 0 2 1 1 2 603 - SGN-U576218 759 1 759 C03HBa0031M05.1 163724 101119 102479 4 47,486,209,15, 0,48,534,743, 101119,101166,102163,102464, 213 14 0 0 0 0 1 37 + SGN-U577169 605 378 605 C03HBa0031M05.1 163724 150289 150553 2 101,126, 378,479, 150289,150427, 107 4 0 0 1 1 1 251 - SGN-U577409 1111 999 1111 C03HBa0031M05.1 163724 150361 150723 3 8,69,34, 0,8,78, 150361,150620,150689, 33 0 0 0 0 0 0 0 + SGN-U577499 581 548 581 C03HBa0031M05.1 163724 150292 150325 1 33, 548, 150292, 39 1 0 0 1 1 1 5 - SGN-U577674 1121 49 90 C03HBa0031M05.1 163724 142075 142120 3 7,24,9, 1031,1038,1063, 142075,142087,142111, 918 0 0 0 0 0 6 3003 - SGN-U577719 1115 197 1115 C03HBa0031M05.1 163724 31101 35022 7 238,47,85,79,154,80,235, 0,238,285,370,449,603,683, 31101,31779,32661,33003,33928,34545,34787, 329 16 0 0 4 10 5 83 + SGN-U577829 1075 291 646 C03HBa0031M05.1 163724 150289 150717 7 21,24,31,17,117,38,97, 291,312,336,368,389,507,549, 150289,150319,150371,150402,150461,150581,150620, 231 15 0 0 2 45 2 1055 + SGN-U578052 683 205 496 C03HBa0031M05.1 163724 108187 109488 3 60,165,21, 205,301,475, 108187,109179,109467, 1332 0 0 0 1 1 7 2762 - SGN-U578824 1333 0 1333 C03HBa0031M05.1 163724 25065 29159 9 171,130,47,284,79,157,80,232,152, 0,172,302,349,633,712,869,949,1181, 25065,25236,25499,25998,26359,26744,27374,27585,29007, 98 5 0 0 0 0 0 0 - SGN-U579611 1644 1539 1642 C03HBa0031M05.1 163724 150620 150723 1 103, 2, 150620, 44 3 0 0 0 0 0 0 + SGN-U579850 1788 1557 1604 C03HBa0031M05.1 163724 60683 60730 1 47, 1557, 60683, 1469 0 0 0 0 0 7 2312 - SGN-U580274 1472 3 1472 C03HBa0031M05.1 163724 19368 23149 8 364,47,85,79,154,80,232,428, 0,364,411,496,575,729,809,1041, 19368,19833,20202,20551,21062,21941,22117,22721, 69 3 0 0 0 0 1 21 - SGN-U580300 1821 1735 1807 C03HBa0031M05.1 163724 150642 150735 2 39,33, 14,53, 150642,150702, 347 4 0 0 0 0 1 114 - SGN-U580845 1141 0 351 C03HBa0031M05.1 163724 109228 109693 2 115,236, 790,905, 109228,109457, 577 0 0 0 0 0 3 1152 + SGN-U580851 634 51 628 C03HBa0031M05.1 163724 107965 109694 4 41,99,200,237, 51,92,191,391, 107965,108148,109143,109457, 31 0 0 0 0 0 0 0 - SGN-U581165 1106 1060 1091 C03HBa0031M05.1 163724 12085 12116 1 31, 15, 12085, 736 4 0 0 0 0 0 0 - SGN-U581453 745 5 745 C03HBa0031M05.1 163724 20407 21147 1 740, 0, 20407, 291 13 0 0 3 7 3 62 - SGN-U581581 678 367 678 C03HBa0031M05.1 163724 150357 150723 5 45,9,130,18,102, 0,46,55,190,209, 150357,150402,150449,150601,150621, 64 2 0 0 1 11 1 12 + SGN-U582230 721 497 574 C03HBa0031M05.1 163724 137214 137292 2 31,35, 497,539, 137214,137257, 52 2 0 0 0 0 0 0 - SGN-U588821 605 385 439 C03HBa0031M05.1 163724 105176 105230 1 54, 166, 105176, 749 0 0 0 0 0 7 2496 - SGN-U590305 753 1 750 C03HBa0031M05.1 163724 19681 22926 8 51,47,86,79,154,80,83,169, 3,54,101,187,266,420,500,583, 19681,19833,20201,20551,21062,21941,22117,22757, 119 8 0 0 1 6 1 137 - SGN-U590305 753 202 335 C03HBa0031M05.1 163724 27372 27636 2 82,45, 418,506, 27372,27591, 78 4 0 0 0 0 1 440 - SGN-U590305 753 667 749 C03HBa0031M05.1 163724 31289 31811 2 50,32, 4,54, 31289,31779, 77 5 0 0 0 0 0 0 + SGN-U590938 534 173 255 C03HBa0031M05.1 163724 109179 109261 1 82, 173, 109179, 49 0 0 0 0 0 0 0 + SGN-U591009 515 0 49 C03HBa0031M05.1 163724 150674 150723 1 49, 0, 150674, 229 10 0 1 2 4 2 42 + SGN-U592488 573 329 573 C03HBa0031M05.1 163724 150287 150569 4 115,9,64,52, 329,445,454,521, 150287,150402,150449,150517, 111 5 0 0 0 0 0 0 - SGN-U592600 414 279 395 C03HBa0031M05.1 163724 150620 150736 1 116, 19, 150620, 563 3 0 0 0 0 1 85 - SGN-U594976 566 0 566 C03HBa0031M05.1 163724 93316 93967 2 512,54, 0,512, 93316,93913, 762 17 0 0 2 10 7 3835 - SGN-U595237 804 15 804 C03HBa0031M05.1 163724 42538 47152 9 75,104,176,137,56,55,110,45,21, 0,75,179,355,492,557,612,723,768, 42538,43340,43573,44835,46861,46917,46973,47085,47131, 38 3 0 0 0 0 0 0 - SGN-U595559 856 517 558 C03HBa0031M05.1 163724 137195 137236 1 41, 298, 137195, 404 19 0 0 0 0 2 925 - SGN-U596511 423 0 423 C03HBa0031M05.1 163724 139002 140350 3 43,169,211, 0,43,212, 139002,139750,140139, 45 0 0 0 1 59 1 59 - SGN-U596824 104 0 104 C03HBa0031M05.1 163724 18894 18998 2 22,23, 0,81, 18894,18975, 32 1 0 0 0 0 0 0 - SGN-U597471 395 336 369 C03HBa0031M05.1 163724 84745 84778 1 33, 26, 84745, 188 2 0 0 0 0 0 0 - SGN-U601010 191 1 191 C03HBa0031M05.1 163724 110495 110685 1 190, 0, 110495, 562 18 0 0 1 1 3 2145 - SGN-U601148 581 0 581 C03HBa0031M05.1 163724 8041 10766 4 192,78,232,78, 0,193,271,503, 8041,8800,9974,10688, 588 0 0 0 0 0 0 0 - SGN-U603624 589 1 589 C03HBa0031M05.1 163724 115983 116571 1 588, 0, 115983, 661 0 0 0 0 0 0 0 + SGN-U604721 661 0 661 C03HBa0031M05.1 163724 48937 49598 1 661, 0, 48937,