psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 1628 6 0 0 0 0 7 3788 + SGN-E747316 1652 0 1634 C03HBa0203C09.1 112639 16062 21484 8 286,99,120,66,66,78,771,148, 0,286,385,505,571,637,715,1486, 16062,17074,18348,18619,19108,20353,20564,21336, 194 2 0 0 0 0 0 0 - SGN-E205741 596 400 596 C03HBa0203C09.1 112639 112443 112639 1 196, 0, 112443, 472 2 0 0 1 1 3 687 - SGN-E207328 475 0 475 C03HBa0203C09.1 112639 12036 13197 4 113,140,75,146, 0,114,254,329, 12036,12436,12819,13051, 223 9 0 0 0 0 1 157 - SGN-E208285 232 0 232 C03HBa0203C09.1 112639 12830 13219 2 64,168, 0,64, 12830,13051, 441 3 0 0 0 0 5 3061 + SGN-E209387 444 0 444 C03HBa0203C09.1 112639 17121 20626 6 52,120,66,66,78,62, 0,52,172,238,304,382, 17121,18348,18619,19108,20353,20564, 634 5 0 1 1 6 3 5 + SGN-E211752 646 0 646 C03HBa0203C09.1 112639 110482 111127 4 34,545,37,24, 0,40,585,622, 110482,110519,111065,111103, 667 5 0 2 1 6 3 5 + SGN-E211877 680 0 680 C03HBa0203C09.1 112639 110482 111161 4 34,545,63,32, 0,40,585,648, 110482,110519,111065,111129, 732 3 0 0 0 0 6 3787 + SGN-E210979 735 0 735 C03HBa0203C09.1 112639 16103 20625 7 245,99,120,66,66,78,61, 0,245,344,464,530,596,674, 16103,17074,18348,18619,19108,20353,20564, 568 4 0 0 1 6 1 3 + SGN-E212476 578 0 578 C03HBa0203C09.1 112639 110481 111056 2 35,537, 0,41, 110481,110519, 51 0 0 0 1 32 1 31 + SGN-E556482 406 145 228 C03HBa0203C09.1 112639 91435 91517 2 16,35, 145,193, 91435,91482, 39 1 0 0 0 0 1 11 + SGN-E556571 366 300 340 C03HBa0203C09.1 112639 10872 10923 2 25,15, 300,325, 10872,10908, 705 1 0 0 0 0 4 6877 - SGN-E321941 706 0 706 C03HBa0203C09.1 112639 91901 99484 5 105,152,254,144,51, 0,105,257,511,655, 91901,92253,96902,97495,99433, 106 0 0 0 0 0 0 0 - SGN-E321853 689 583 689 C03HBa0203C09.1 112639 112533 112639 1 106, 0, 112533, 229 1 0 0 0 0 0 0 - SGN-E311001 517 287 517 C03HBa0203C09.1 112639 112409 112639 1 230, 0, 112409, 794 6 0 1 1 1 6 2218 + SGN-E538793 815 0 802 C03HBa0203C09.1 112639 18460 21479 8 8,66,66,78,249,191,129,14, 0,8,74,140,218,467,658,788, 18460,18619,19108,20353,20564,21144,21336,21465, 747 6 0 0 0 0 6 3787 + SGN-E538796 753 0 753 C03HBa0203C09.1 112639 16080 20620 7 268,99,120,66,66,78,56, 0,268,367,487,553,619,697, 16080,17074,18348,18619,19108,20353,20564, 811 5 0 0 1 1 7 2220 + SGN-E538800 821 0 817 C03HBa0203C09.1 112639 18452 21488 8 16,66,66,78,249,191,145,5, 0,16,82,148,226,475,666,812, 18452,18619,19108,20353,20564,21144,21336,21483, 733 5 0 0 0 0 1 1 + SGN-E543557 775 0 738 C03HBa0203C09.1 112639 6311 7050 2 46,692, 0,46, 6311,6358, 621 5 0 0 1 1 0 0 + SGN-E543558 627 0 627 C03HBa0203C09.1 112639 6255 6881 2 424,202, 0,425, 6255,6679, 39 1 0 0 0 0 1 11 + SGN-E546018 675 551 591 C03HBa0203C09.1 112639 10871 10922 2 26,14, 551,577, 10871,10908, 52 3 0 0 0 0 0 0 + SGN-E547163 717 183 238 C03HBa0203C09.1 112639 89405 89460 1 55, 183, 89405, 698 12 0 0 1 2 7 3788 + SGN-E548116 713 1 713 C03HBa0203C09.1 112639 16081 20579 8 267,99,120,66,31,34,78,15, 1,268,367,487,553,586,620,698, 16081,17074,18348,18619,19108,19140,20353,20564, 870 3 0 0 0 0 3 5366 + SGN-E726889 873 0 873 C03HBa0203C09.1 112639 37375 43614 4 41,418,406,8, 0,41,459,865, 37375,40754,43019,43606, 775 0 0 0 0 0 6 1345 - SGN-E727744 792 3 778 C03HBa0203C09.1 112639 9535 11655 7 66,198,123,61,178,79,70, 14,80,278,401,462,640,719, 9535,10054,10412,10707,11039,11380,11585, 768 6 0 0 1 1 4 1735 + SGN-E727889 775 0 775 C03HBa0203C09.1 112639 18660 21169 6 25,65,1,78,502,103, 0,25,90,91,169,672, 18660,19108,20351,20353,20564,21066, 37 1 0 0 0 0 1 11 + SGN-E718293 668 616 654 C03HBa0203C09.1 112639 10872 10921 2 25,13, 616,641, 10872,10908, 89 0 0 0 3 24 3 20 + SGN-E721142 784 1 114 C03HBa0203C09.1 112639 110463 110572 5 53,11,13,7,5, 1,54,82,99,109, 110463,110519,110540,110560,110567, 767 4 0 0 0 0 3 1199 - SGN-E736362 775 4 775 C03HBa0203C09.1 112639 13432 15402 4 147,304,176,144, 0,147,451,627, 13432,13667,14143,15258, 478 2 0 0 0 0 2 1111 - SGN-E737187 480 0 480 C03HBa0203C09.1 112639 13792 15383 3 179,176,125, 0,179,355, 13792,14143,15258, 478 2 0 0 0 0 2 1111 - SGN-E738542 480 0 480 C03HBa0203C09.1 112639 13792 15383 3 179,176,125, 0,179,355, 13792,14143,15258, 475 2 0 0 0 0 2 1111 - SGN-E740483 480 3 480 C03HBa0203C09.1 112639 13792 15380 3 179,176,122, 0,179,355, 13792,14143,15258, 899 2 0 0 0 0 8 4496 + SGN-E700960 901 0 901 C03HBa0203C09.1 112639 40765 46162 9 140,122,75,225,45,45,30,120,99, 0,140,262,337,562,607,652,682,802, 40765,41050,43019,44062,44402,45528,45660,45830,46063, 861 5 0 0 3 3 5 7517 - SGN-E710481 874 5 874 C03HBa0203C09.1 112639 91108 99491 9 4,68,44,12,130,152,254,144,58, 0,5,74,118,131,261,413,667,811, 91108,91112,91180,91864,91876,92253,96902,97495,99433, 387 1 0 0 0 0 1 190 - SGN-E243133 388 0 388 C03HBa0203C09.1 112639 8328 8906 2 325,63, 0,325, 8328,8843, 434 7 0 0 0 0 4 1412 - SGN-E242275 441 0 441 C03HBa0203C09.1 112639 8567 10420 5 86,80,69,198,8, 0,86,166,235,433, 8567,8843,9532,10054,10412, 551 1 0 0 0 0 4 776 - SGN-E247979 552 0 552 C03HBa0203C09.1 112639 11856 13184 5 53,152,139,75,133, 0,53,205,344,419, 11856,11999,12437,12819,13051, 37 0 0 0 0 0 2 13 + SGN-E249876 613 446 483 C03HBa0203C09.1 112639 10871 10921 3 5,19,13, 446,451,470, 10871,10878,10908, 556 0 0 0 1 1 7 3932 - SGN-E257920 557 0 557 C03HBa0203C09.1 112639 87477 91965 9 36,7,11,13,96,87,48,157,101, 0,36,43,54,68,164,251,299,456, 87477,87619,87627,87639,87652,90544,90714,91067,91864, 666 3 0 0 0 0 3 465 - SGN-E258770 694 11 680 C03HBa0203C09.1 112639 20350 21484 4 81,249,191,148, 14,95,344,535, 20350,20564,21144,21336, 541 2 0 0 0 0 4 1374 - SGN-E275526 543 0 543 C03HBa0203C09.1 112639 8852 10769 5 71,69,218,123,62, 0,71,140,358,481, 8852,9532,10054,10412,10707, 307 1 0 0 0 0 0 0 - SGN-E276042 678 370 678 C03HBa0203C09.1 112639 112331 112639 1 308, 0, 112331, 153 0 0 0 0 0 0 0 - SGN-E276091 523 370 523 C03HBa0203C09.1 112639 112486 112639 1 153, 0, 112486, 484 1 0 0 0 0 2 1901 + SGN-E274958 485 0 485 C03HBa0203C09.1 112639 16081 18467 3 267,99,119, 0,267,366, 16081,17074,18348, 474 3 0 0 0 0 4 1886 + SGN-E276385 477 0 477 C03HBa0203C09.1 112639 18349 20712 5 119,66,66,78,148, 0,119,185,251,329, 18349,18619,19108,20353,20564, 378 0 0 0 0 0 1 726 + SGN-E300704 379 1 379 C03HBa0203C09.1 112639 16064 17168 2 284,94, 1,285, 16064,17074, 523 3 0 0 0 0 2 3 + SGN-E304954 526 0 526 C03HBa0203C09.1 112639 6256 6785 3 49,29,448, 0,49,78, 6256,6307,6337, 34 0 0 0 0 0 1 11 + SGN-E304225 641 578 612 C03HBa0203C09.1 112639 10878 10923 2 19,15, 578,597, 10878,10908, 506 4 0 0 0 0 5 2391 + SGN-E332189 512 0 510 C03HBa0203C09.1 112639 43051 45952 6 43,225,45,45,30,122, 0,43,268,313,358,388, 43051,44062,44402,45528,45660,45830, 608 15 0 0 1 4 6 2508 + SGN-E332071 627 0 627 C03HBa0203C09.1 112639 43065 46196 7 29,225,45,45,30,121,128, 0,29,254,299,344,374,499, 43065,44062,44402,45528,45660,45830,46068, 37 1 0 0 0 0 1 11 + SGN-E324116 377 135 173 C03HBa0203C09.1 112639 10872 10921 2 25,13, 135,160, 10872,10908, 193 1 0 0 0 0 0 0 - SGN-E313310 342 148 342 C03HBa0203C09.1 112639 112445 112639 1 194, 0, 112445, 775 7 0 0 2 2 6 7519 - SGN-E316096 784 0 784 C03HBa0203C09.1 112639 91189 99490 8 33,8,4,130,152,254,144,57, 0,34,42,47,177,329,583,727, 91189,91863,91872,91876,92253,96902,97495,99433, 239 0 0 0 0 0 1 160 - SGN-E336919 239 0 239 C03HBa0203C09.1 112639 10060 10459 2 192,47, 0,192, 10060,10412, 409 0 0 0 0 0 3 4300 + SGN-E335966 409 0 409 C03HBa0203C09.1 112639 36400 41109 4 169,30,151,59, 0,169,199,350, 36400,37386,40754,41050, 549 1 0 0 0 0 2 4836 - SGN-E344366 571 21 571 C03HBa0203C09.1 112639 92255 97641 3 150,254,146, 0,150,404, 92255,96902,97495, 708 1 0 0 1 1 6 6602 - SGN-E346045 710 0 710 C03HBa0203C09.1 112639 83798 91109 8 233,29,84,57,129,87,48,42, 0,234,263,347,404,533,620,668, 83798,84031,84150,87456,87619,90544,90714,91067, 393 10 0 0 1 1 1 2 + SGN-E350882 404 0 404 C03HBa0203C09.1 112639 33972 34377 2 312,91, 0,313, 33972,34286, 675 0 0 0 0 0 5 1536 + SGN-E350756 675 0 675 C03HBa0203C09.1 112639 44183 46394 6 104,45,45,30,120,331, 0,104,149,194,224,344, 44183,44402,45528,45660,45830,46063, 456 3 0 0 0 0 4 6147 + SGN-E367153 459 0 459 C03HBa0203C09.1 112639 36437 43043 5 132,30,151,122,24, 0,132,162,313,435, 36437,37386,40754,41050,43019, 52 3 0 0 0 0 0 0 + SGN-E360480 595 182 237 C03HBa0203C09.1 112639 89405 89460 1 55, 182, 89405, 537 8 0 0 0 0 4 787 - SGN-E359041 559 14 559 C03HBa0203C09.1 112639 11850 13182 5 59,152,139,64,131, 0,59,211,350,414, 11850,11999,12437,12819,13051,