<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-12-01 12:09:12"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U579557" ref_strand="+" ref_description="SGN-U579557 Tomato 200607#2 [4 ESTs aligned] (*GB) gi|90398982|emb|CAJ86254.1| (e_value=3e-58) H0801D08.12; (*ATH) AT3G09010.1 (e_value=1e-55) | Symbol: None | protein kinase family protein, contains protein kinase domain, Pfam:PF00069 | chr3:2749958-2752281 FORWARD | Aliases: T16O11.3; (*SWP) sp|Q9C5S9|CRK6_ARATH (e_value=7e-41) Cysteine-rich receptor-like protein kinase 6 OS=Arabidopsis thaliana GN=CRK6; ">
      <seq>tgcttaacacatgcaagtcggacgggaaacacgggaaacggtgtttccagtggcggactggtgttcccctcccaaagcagtgtattggtggtgaaggctaacatttcatttactcatcaaaaggcactatcaattgatttagacacgctaattgacatgagttgttgcttctttggcgaccggaaaaagggtcatgatctcgttcaccatgatacaagagatgcaggaggtgactccattgcaagcacaaagaatttttcatttaatgaattaagattagcaaccaacaacttccatcaaattaataaaatagggcgaggcggttttggcacagtatacaagggaactctaaaacaaggaaaagatgttgctgtgaagacactagcagcagaatcaaggcagggtttgcgggagtttttgacagaaattgagacaatatcaaatgtcaaacatccaaatctagttgagataattggatgctgtgctgatggaaataaccggattttggtctatgaatatttagaaaatagaagccttgatcgggcactgtttggttcaaggactagtattaagttagaatgggaaaaaaggactactatttgcttgggtactgctcgaggtcttgcatatctacatgaagaactagtgccacatatagtgcacagggatataaaagctagtaatattctgcttgacagggatatacaccaaaaattggagattttgggcttgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0127N23.1" temp_strand="+" temp_description="C02SLm0127N23.1  AC232778.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0127N23 sequenced_by:kribb upload_account_name:korea">
        <position start="7799" stop="10457"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8109" g_stop="8131" g_length="23"/>
          <reference_exon_boundary r_type="cDNA" r_start="58" r_stop="80" r_length="23" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="8132" i_stop="8979" i_length="848">
            <donor d_prob="0.997" d_score="0.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="8980" g_stop="9128" g_length="149"/>
          <reference_exon_boundary r_type="cDNA" r_start="81" r_stop="229" r_length="149" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="9129" i_stop="9312" i_length="184">
            <donor d_prob="0.804" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="9313" g_stop="9425" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="230" r_stop="342" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="9426" i_stop="9683" i_length="258">
            <donor d_prob="0.938" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="9684" g_stop="9894" g_length="211"/>
          <reference_exon_boundary r_type="cDNA" r_start="343" r_stop="553" r_length="211" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="9895" i_stop="9975" i_length="81">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="9976" g_stop="10157" g_length="182"/>
          <reference_exon_boundary r_type="cDNA" r_start="554" r_stop="734" r_length="181" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0127N23.1" gen_strand="+" ref_id="SGN-U579557" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>678</cumulative_length_of_scored_exons>
        <coverage percentage="0.924" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0127N23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U579557" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8109" e_stop="8131"/>
          <exon e_start="8980" e_stop="9128"/>
          <exon e_start="9313" e_stop="9425"/>
          <exon e_start="9684" e_stop="9894"/>
          <exon e_start="9976" e_stop="10157"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGGTGTTCCCCTCCCAAAGCAGGTTCTTATATTTTATGGAATTAGATGCTTAGCTGCTATTTATAATTACTTGTTTATTTTTTTTTTTTTATAATTACTTATTCATTTTGACAAATTAAAAAAATATAATTTTTTAATTAATTATTTTGAAAATGATACAATTGATCCATTCATATTACCAAAGGCTAAAATAATAAACTCGATTATGTTAACAATTATTTTTTAATAGGTAGTCAATTATGTTAATAATTATTTTTTTTAATAAGTATGTCAATTCAAAAATAGACAGAGAAAATGAATCCCGTGGAGTTTACGGTTTTTTCTTTCTCTATTTTAATTTTATAGTAATGGAGATAGTTCATTAGCATGTTTAACCACTGTTATCAAAAACGAGTAAAAGTCTAAAGTCAATTGGGGCTTTAATGAAAAAGCGAAAATGAAGAAATTATAAAGTGAAATATCAATTGTATATTGTGTAGTGATGTTAGCGAAGGTTCAATATGTTTTATTTGAGCCTTGCGATTTTGACAATACTCTATTTAGCACATCAAGCAATCAAATTCGTTTCCTTTTGACTTTCTGTAGAACGTTTTTTTTTTAAATTTTAAAAAATAGAATATATGTAAGCAAACCTTTATTCAACTGCAGCCTAATGACAGTGTTTTCAAACCCCTGCAATTTTATTGAATCAATATTGAGAATCATACTTATTTTGATCATTTATAAACTTTTGTACAATTGTTTATAGTACAGACAGTAGATATAAATGATGCTATTTTTAGCTTCTTCAGCTGAATAAATATGGTTGTGCCTCAATAATTAGTTTGACAAGCTGAAGGAGGAAGTTTTTTTTTGGTTTTGTTTTTACAGTGTATTGGTGGTGAAGGCTAACATTTCATTTACTCATCAAAAGGCACTATCAATTGATTTAGACACGCTAATTGACATGAGTTGTTGCTTCTTTGGCGACCGGAAAAAGGGTCATGATCTCGTTCACCATGATACAAGAGATGCAGGAGGTTAGTGGGAACTGGGATGTTTTTCTGTTTTTTCAGAGGACTTGTTTGCAACTTTATGCCATTGGAGATGCATTGCGCATTTGGTTGTAGATCATCTTCAACCTAGGCATAAGTAATGCCAGTGCAAATGCTGTCTTGAGTAAATTCAATTCATATACCATAACTATCTTTATATATCTGGCAGGTGACTCCATTGCAAGCACAAAGAATTTTTCATTTAATGAATTAAGATTAGCAACCAACAACTTCCATCAAATTAATAAAATAGGGCGAGGCGGTTTTGGCACAGTATACAAGGTACAGCTCTACTCAACGAATACGTCTCATGCTTTTTCATGCAGCAGTTTTGTGCATTGGACAACTTATTTTTGTGTCTTTTGCATAGTTCTGTTTAAAGTGTTACATTCTTGGATGTTATGGTTTAGTTCAAGTTATAGTAGTAGTAGGCAGATTTTTGAAATTCTCAGGAAATCTGCATTACTAACTTCATATTTTGTTATTAGATTTTCATTATTATCTCCCCTTTAATGGAGTTGTGTAATACGGTAATTGCAGGGAACTCTAAAACAAGGAAAAGATGTTGCTGTGAAGACACTAGCAGCAGAATCAAGGCAGGGTTTGCGGGAGTTTTTGACAGAAATTGAGACAATATCAAATGTCAAACATCCAAATCTAGTTGAGATAATTGGATGCTGTGCTGATGGAAATAACCGGATTTTGGTCTATGAATATTTAGAAAATAGAAGCCTTGATCGGGCACTGTTTGGTAATGGCCGAACTTCTGGTAAAATAAAGGATTAACTTGAGAATTATGGAATGGCTGATAATGGTATTTTTTACTTTGCAGGTTCAAGGACTAGTATTAAGTTAGAATGGGAAAAAAGGACTACTATTTGCTTGGGTACTGCTCGAGGTCTTGCATATCTACATGAAGAACTAGTGCCACATATAGTGCACAGGGATATAAAAGCTAGTAATATTCTGCTTGACAAGGATTATACACCAAAAATTGGAGATTTTGGGCTTGCT</genome_strand>
        <mrna_strand>CTGGTGTTCCCCTCCCAAAGCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTATTGGTGGTGAAGGCTAACATTTCATTTACTCATCAAAAGGCACTATCAATTGATTTAGACACGCTAATTGACATGAGTTGTTGCTTCTTTGGCGACCGGAAAAAGGGTCATGATCTCGTTCACCATGATACAAGAGATGCAGGAG........................................................................................................................................................................................GTGACTCCATTGCAAGCACAAAGAATTTTTCATTTAATGAATTAAGATTAGCAACCAACAACTTCCATCAAATTAATAAAATAGGGCGAGGCGGTTTTGGCACAGTATACAAG..................................................................................................................................................................................................................................................................GGAACTCTAAAACAAGGAAAAGATGTTGCTGTGAAGACACTAGCAGCAGAATCAAGGCAGGGTTTGCGGGAGTTTTTGACAGAAATTGAGACAATATCAAATGTCAAACATCCAAATCTAGTTGAGATAATTGGATGCTGTGCTGATGGAAATAACCGGATTTTGGTCTATGAATATTTAGAAAATAGAAGCCTTGATCGGGCACTGTTTG.................................................................................GTTCAAGGACTAGTATTAAGTTAGAATGGGAAAAAAGGACTACTATTTGCTTGGGTACTGCTCGAGGTCTTGCATATCTACATGAAGAACTAGTGCCACATATAGTGCACAGGGATATAAAAGCTAGTAATATTCTGCTTGACAGGGA-TATACACCAAAAATTGGAGATTTTGGGCTTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U569177" ref_strand="+" ref_description="SGN-U569177 Tomato 200607#2 [11 ESTs aligned] (*GB) gi|147832853|emb|CAN72814.1| (e_value=4e-22) hypothetical; (*ATH) AT3G09010.1 (e_value=1e-14) | Symbol: None | protein kinase family protein, contains protein kinase domain, Pfam:PF00069 | chr3:2749958-2752281 FORWARD | Aliases: T16O11.3; ">
      <seq>gagntggtggatgaagaactagatgaattcccggagagagaagtcgtcaggtacatcaagacggctctgttttgcacacaagcaaatgcaaacagaagaccaatgatgagccaggttattgagatgctttcaagagatatccagctaaatgagaaagaacttacaccacctggtttcttcgaagattctgaaggaagcgtgcaatcaagattgaagatatctagaggtaatactagtcaacaaagttctgtacacatcacaattactcaggtgacccctagatagtcatccttggtgaccgcctgatcctgcacttgaatcattcttcctgcgacattgttttgcagcttaagatgacgtttgcttgagattttctaggaattgagtttgcaaacttgtatattatggatttttaacaaaaaaggatagctaactttttcaaatctagttttttcaaatttgttgaaatatttctgaaatcttcatagaaaagtttgaacctttctgcaagtgtagttcagacacatgaagcaaaattgagtttgcaaattcaaaattttttgaaaaatttcaaacaaacgccatctaagttcacagaagattgaaattgcaggattaatgatatcggaaggcgttgtcaaagttcctagacaaaattccagcaatttatgtgtattatttttgtatgacaaacatttttttggatcctgttttttaccttattatttttattctgacaggtattatattaaaccgataacattatatagtttcaagtaaaatattctttcaaaataatattttatcaagat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0127N23.1" temp_strand="+" temp_description="C02SLm0127N23.1  AC232778.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0127N23 sequenced_by:kribb upload_account_name:korea">
        <position start="11841" stop="13252"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12141" g_stop="12952" g_length="812"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="812" r_length="812" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0127N23.1" gen_strand="+" ref_id="SGN-U569177" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>812</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0127N23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U569177" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12141" e_stop="12952"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGTTGGTGGATGAAGAACTAGATGAATTCCCGGAGAGAGAAGTCGTCAGGTACATCAAGACGGCTCTGTTTTGCACACAAGCAAATGCAAACAGAAGACCAATGATGAGCCAGGTTATTGAGATGCTTTCAAGAGATATCCAGCTAAATGAGAAAGAACTTACACCACCTGGTTTCTTCGAAGATTCTGAAGGAAGCGTGCAATCAAGATTGAAGATATCTAGAGGTAATACTAGTCAACAAAGTTCTGTACACATCACAATTACTCAGGTGACCCCTAGATAGTCATCCTTGGTGACCGCCTGATCCTGCACTTGAATCATTCTTCCTGCGACATTGTTTTGCAGCTTAAGATGACGTTTGCTTGAGATTTTCTAGGAATTGAGTTTGCAAACTTGTATATTATGGATTTTTAACAAAAAAGGATAGCTAACTTTTTCAAATCTAGTTTTTTCAAATTTGTTGAAATATTTCTGAAATCTTCATAGAAAAGTTTGAACCTTTCTGCAAGTGTAGTTCAGACACATGAAGCAAAATTGAGTTTGCAAATTCAAAATTTTTTGAAAAATTTCAAACAAACGCCATCTAAGTTCACAGAAGATTGAAATTGCAGGATTAATGATATCGGAAGGCGTTGTCAAAGTTCCTAGACAAAATTCCAGCAATTTATGTGTATTATTTTTGTATGACAAACATTTTTTTGGATCCTGTTTTTTACCTTATTATTTTTATTCTGACAGGTATTATATTAAACCGATAACATTATATAGTTTCAAGTAAAATATTCTTTCAAAATAATATTTTATCAAGAT</genome_strand>
        <mrna_strand>GAGNTGGTGGATGAAGAACTAGATGAATTCCCGGAGAGAGAAGTCGTCAGGTACATCAAGACGGCTCTGTTTTGCACACAAGCAAATGCAAACAGAAGACCAATGATGAGCCAGGTTATTGAGATGCTTTCAAGAGATATCCAGCTAAATGAGAAAGAACTTACACCACCTGGTTTCTTCGAAGATTCTGAAGGAAGCGTGCAATCAAGATTGAAGATATCTAGAGGTAATACTAGTCAACAAAGTTCTGTACACATCACAATTACTCAGGTGACCCCTAGATAGTCATCCTTGGTGACCGCCTGATCCTGCACTTGAATCATTCTTCCTGCGACATTGTTTTGCAGCTTAAGATGACGTTTGCTTGAGATTTTCTAGGAATTGAGTTTGCAAACTTGTATATTATGGATTTTTAACAAAAAAGGATAGCTAACTTTTTCAAATCTAGTTTTTTCAAATTTGTTGAAATATTTCTGAAATCTTCATAGAAAAGTTTGAACCTTTCTGCAAGTGTAGTTCAGACACATGAAGCAAAATTGAGTTTGCAAATTCAAAATTTTTTGAAAAATTTCAAACAAACGCCATCTAAGTTCACAGAAGATTGAAATTGCAGGATTAATGATATCGGAAGGCGTTGTCAAAGTTCCTAGACAAAATTCCAGCAATTTATGTGTATTATTTTTGTATGACAAACATTTTTTTGGATCCTGTTTTTTACCTTATTATTTTTATTCTGACAGGTATTATATTAAACCGATAACATTATATAGTTTCAAGTAAAATATTCTTTCAAAATAATATTTTATCAAGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U580379" ref_strand="+" ref_description="SGN-U580379 Tomato 200607#2 [33 ESTs aligned] (*GB) gi|147832854|emb|CAN72815.1| (e_value=7e-79) hypothetical; (*ATH) AT2G20760.1 (e_value=4e-61) | Symbol: None | expressed protein | chr2:8949844-8952304 REVERSE | Aliases: F5H14.27, F5H14_27; ">
      <seq>gtgcgcatatataggtgtactagagagaaggaaaattcgagagattttgcagactgtagagagagaaaggagagaaaagaagggaaatggctgcatttgatgcgttcagtatggacggtgaggtaccggcaccggcggcatcaacaccgttcgatgatggagactacgacggctcttacaccgccttctccaacgccgatacgccgccgtttcacggctctggaggattcggtggagactatgacgaagtaacggtggaacacgtatctcataccgtcgatagtcccgatccctacggatacgggtcagattcgtttccaaaccaaaccggttcatttggagcttctgcagctccgatctcgaacgggaatggtaagccctacgatctaggtgaagatactgagggaattttcagttccgatggacccgttctcccccctccgaatgaaatgcgtgaggaaggttttgcgctccgcgaatggcgaaggcaaaatgctatccgtcttgaggagaaggagaagagagaaaaggaaatcagaagccaaattattgaggaaggtgaagaatataagaaagcattctatgagaaaagaaatctcagtattgagaccaacaagacaactaaccgcgagaaagaaaagctgtacttgactagtcaagagaagttccataaagaagctgataagcaatattggaaagccatagcagagctcattcccaaggaggtgcccagcattgagaagaagggaaggaagaaggatcaagataagaagccatccatcacagtcgtccaagggcctaaacctgggaaacctaccgatctttcaaggatgcgccacatactgctgaagcttaagcacaccccaccacctcacatgataccaccccctcctgcccctgccaaggacgccaaagttgggaaggatggaaaagacaccaaggatgccaaagctggaaaggacggaaaagacaccaagaatgctaaagatactgtagcaccaaatgggactccagatgcacctaccagtgatgccaaagttactcagacatcagaagaacctactgctgcagaatgatcggcttttagcctaatttctttagtctttgatgttgtaatgtgttatcctcttacatatactcttttttctctatgaattttgtatcatttactatattttgtgtcattctactactattctattggttcgtgacagacattagctgcattttgttgcattggatgtctgagtttgtttattgtactatttaggtcctttcttaactggaggtgaattcattattttcttgtttacagaaaccttatatttcttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0127N23.1" temp_strand="-" temp_description="C02SLm0127N23.1  AC232778.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0127N23 sequenced_by:kribb upload_account_name:korea">
        <position start="17670" stop="13211"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17370" g_stop="16884" g_length="487"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="487" r_length="487" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16883" i_stop="14489" i_length="2395">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14488" g_stop="14335" g_length="154"/>
          <reference_exon_boundary r_type="cDNA" r_start="488" r_stop="641" r_length="154" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="14334" i_stop="14202" i_length="133">
            <donor d_prob="0.924" d_score="1.00"/>
            <acceptor a_prob="0.554" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14201" g_stop="13511" g_length="691"/>
          <reference_exon_boundary r_type="cDNA" r_start="642" r_stop="1332" r_length="691" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0127N23.1" gen_strand="-" ref_id="SGN-U580379" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1332</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0127N23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U580379" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17370" e_stop="16884"/>
          <exon e_start="14488" e_stop="14335"/>
          <exon e_start="14201" e_stop="13511"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGCGCATATATAGGTGTACTAGAGAGAAGGAAAATTCGAGAGATTTTGCAGACTGTAGAGAGAGAAAGGAGAGAAAAGAAGGGAAATGGCTGCATTTGATGCGTTCAGTATGGACGGTGAGGTACCGGCACCGGCGGCATCAACACCGTTCGATGATGGAGACTACGACGGCTCTTACACCGCCTTCTCCAACGCCGATACGCCGCCGTTTCACGGCTCTGGAGGATTCGGTGGAGACTATGACGAAGTAACGGTGGAACACGTATCTCATACCGTCGATAGTCCCGATCCCTACGGATACGGGTCAGATTCGTTTCCAAACCAAACCGGTTCATTTGGAGCTTCTGCAGCTCCGATCTCGAACGGGAATGGTAAGCCCTACGATCTAGGTGAAGATACTGAGGGAATTTTCAGTTCCGATGGACCCGTTCTCCCCCCTCCGAATGAAATGCGTGAGGAAGGTTTTGCGCTCCGCGAATGGCGAAGGTTTGTTCTACTTCATTCCTATTTTTGCGAATTTATTTTGATTTAGTATATTACCAAAAAGAAGATGTATTGATTTTAAGCTGTTCCTTAATATTTTAACTAAAATTGACAGATCTATTGCTTATTGTTAGTTACTGTAAATGGCAGATCATCGATAAGATCAGCTTTATTTCAAAGTTCCTAAGCTCTATAGTGAATTAATTTTTTTTGCATATTTTAATTTAATTCTGGAACTTTTTTATTTTATTGTTAAATTTGCAGATCTATTGTTGATACTAATAGATCTGTTAGTTTGTGTTTGCGCTCAATTTTAGGAGTTCCTGCGGTGTAAGACGCTGATCACTATGATCTCTTGGCAAAGAAAATTTGAATGTTGTAGGTCTTAACTTGTGGAGTATTTCATTTCTATTTATCTTCTACTTGAGATGATTTATATCTTGAGATCAATTTCCGAAAATGCTATAGGTGTCGATTTTCTATTGCATTAATTGGTTCATAACTACCAACTTTGTGCCATGGGACAAGAATAATAAGCTTCTAGTGGGGTTCCCCTCCCCAAATAAGTTAGTTTTTAGTGCTAAAATTAAGTAAAGCTTGTGTCGAGACACTCTTAATGCTTTTTGAGTACAACTAATTAGGTATTGTTAGGGCTAGTCTAGTTCTTCTAGTATTGGTTCATGTATTGTCGTGCATAGGGGAAAACTAAGAAGTTCCAATTGAGATATCCGTAAGCTGGGAAAATGTATAAATGTTTTCACATATCTTTACTAATAGTTCTCACTTATAAGTTGGAAGGATTGAGCATTTTCATGTTTTCCTCTTTCCCCATTGTTGCCACTCCTAAAAGCTGTCCAAACTCCACAGTGCTGAACTATTTCATCACTTGACATCACAAGCAATGTTTTCTAGACTTCCTGAATTTCGAAGATCAAATTATTTGTTTGAAGGAGTTATATGTGTAGAGAAAATTAGAAGCAAATTCTACTGGTTCTTGGATGAGATCATATAGAGTTCAGGATTAGGGGTTGAATCTCATTGATAATTGATGATTTGTTTTGATTTTCTACTAGTACTATAAAATAGTATATTCTTGAGAACTTACGAAAATATCACGCCATGTTTCGGTATAGGTATGGCAATGGGACGAGGGCAGGGCAAAGGTCTAATAGGGGCGGGGGCGGTCAAAGCTTAAATTTTTAAAACTTTAGGTGGGGCATGGGAAGGTTGTGTTTCACTGTTTGGGGCCTTTTGGCCCATCCTTTCGTAAGAGATTTGTTGGTGGTTTTCTGAGACATAATTGAGCAAGGTTAACAAATAAATTGGACATTGTAGTATTAAAAGTTTGAGTCTCGTGTATGAGATTTCAGATCTGAATTTCCTCATAGTGGTTTTGTGGTAGTAGTGGTGTGATTATGGGACGAGATTTAGTATCATTTAAATTTATTTTATGTGATGTCTAAACATAGTTGAATCATTTTCATCAACAAATTAATTTTATGAATCATTTATAAAGTTGACCTTTTCTATTAGATGCTGCTCTTGTAATGTAATTAGATCATAATAAGCTATGAAAGTTTATCAAACATGGTGATAAGAACAGTGATTTAGTTTAACAGAAATGGTGTTCAATGCCAACTTTCAGTCTTTCACTGACGGGACATAATAAACAATAACACAATCCTCATCTTTTATGTTTTATTTAGAAGGATATTCAATAGTATGCGCTAAACAGATCTTTTCTGTTTTAAAATAGAAGCAGTTTTTTTTTGTAAATATTAAATAGGATACTTCCAAAAAAAATGAAGTCTTATTAGTGAAATGGGACAGAGCGTGGTGGGAAGGGCAGATCAAAATCTTAACATGTCAAGCTGTATCCCACCTGCCCCATTTACATTCCTAGTGGCTTAACCATAATTGAGAGTAATTGGTTATGCACAACCCTTTTTTCCTTTGAATCCACCATTTTTTGGGAATTGGGTTGAGGGCTTTAGCAAAATGGAATTAGGGTCAAGAGGTAGGGGCTGACGTGGAGTGATGCTAAGCATTCCAATGGCAGAAGAGTATTTCCTCAAGGGGATTCTATGTATCTAGACAATGAGTCGTTTTTGCTTTTCTCAGATAAATAAAAAAGAAGAGAATCAAAAGAATCTCATTACATCAGTACATGACTCTCTTTTGGCCAAATTTTTTCGGACGCCTGCAATTGAAATGATGAAAACTAAGCTGTCATATACATGTAGGGTGCCACATGAGTAACAATCTTTGAGGTTTATAGTTAGCATGCATATGCTAAAACAAATTAAGGATCGTTTGTGCAATATTCTTTAGGAATATTGGAAATGTGCTCGTATATGTGTGCTGTTAAAATTTTCGTTTGTTTTTTGGTTTGGATCAGGCAAAATGCTATCCGTCTTGAGGAGAAGGAGAAGAGAGAAAAGGAAATCAGAAGCCAAATTATTGAGGAAGGTGAAGAATATAAGAAAGCATTCTATGAGAAAAGAAATCTCAGTATTGAGACCAACAAGACAACTAACCGCGAGAAAGAAAAGGTGAAGCTCTAGGGAGTTATCAGCTTTTCTTAACAAACTGGAGTTATATTTGATTCTCCCTACTCTTTCTTACAAGATTTTATGGATATCTAACTTTGACAAGTTCTTTCCTTTTCTCCCCTCCCCATGACAGCTGTACTTGACTAGTCAAGAGAAGTTCCATAAAGAAGCTGATAAGCAATATTGGAAAGCCATAGCAGAGCTCATTCCCAAGGAGGTGCCCAGCATTGAGAAGAAGGGAAGGAAGAAGGATCAAGATAAGAAGCCATCCATCACAGTCGTCCAAGGGCCTAAACCTGGGAAACCTACCGATCTTTCAAGGATGCGCCACATACTGCTGAAGCTTAAGCACACCCCACCACCTCACATGATACCACCCCCTCCTGCCCCTGCCAAGGACGCCAAAGTTGGGAAGGATGGAAAAGACACCAAGGATGCCAAAGCTGGAAAGGACGGAAAAGACACCAAGAATGCTAAAGATACTGTAGCACCAAATGGGACTCCAGATGCACCTACCAGTGATGCCAAAGTTACTCAGACATCAGAAGAACCTACTGCTGCAGAATGATCGGCTTTTAGCCTAATTTCTTTAGTCTTTGATGTTGTAATGTGTTATCCTCTTACATATACTCTTTTTTCTCTATGAATTTTGTATCATTTACTATATTTTGTGTCATTCTACTACTATTCTATTGGTTCGTGACAGACATTAGCTGCATTTTGTTGCATTGGATGTCTGAGTTTGTTTATTGTACTATTTAGGTCCTTTCTTAACTGGAGGTGAATTCATTATTTTCTTGTTTACAGAAACCTTATATTTCTTG</genome_strand>
        <mrna_strand>GTGCGCATATATAGGTGTACTAGAGAGAAGGAAAATTCGAGAGATTTTGCAGACTGTAGAGAGAGAAAGGAGAGAAAAGAAGGGAAATGGCTGCATTTGATGCGTTCAGTATGGACGGTGAGGTACCGGCACCGGCGGCATCAACACCGTTCGATGATGGAGACTACGACGGCTCTTACACCGCCTTCTCCAACGCCGATACGCCGCCGTTTCACGGCTCTGGAGGATTCGGTGGAGACTATGACGAAGTAACGGTGGAACACGTATCTCATACCGTCGATAGTCCCGATCCCTACGGATACGGGTCAGATTCGTTTCCAAACCAAACCGGTTCATTTGGAGCTTCTGCAGCTCCGATCTCGAACGGGAATGGTAAGCCCTACGATCTAGGTGAAGATACTGAGGGAATTTTCAGTTCCGATGGACCCGTTCTCCCCCCTCCGAATGAAATGCGTGAGGAAGGTTTTGCGCTCCGCGAATGGCGAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAAATGCTATCCGTCTTGAGGAGAAGGAGAAGAGAGAAAAGGAAATCAGAAGCCAAATTATTGAGGAAGGTGAAGAATATAAGAAAGCATTCTATGAGAAAAGAAATCTCAGTATTGAGACCAACAAGACAACTAACCGCGAGAAAGAAAAG.....................................................................................................................................CTGTACTTGACTAGTCAAGAGAAGTTCCATAAAGAAGCTGATAAGCAATATTGGAAAGCCATAGCAGAGCTCATTCCCAAGGAGGTGCCCAGCATTGAGAAGAAGGGAAGGAAGAAGGATCAAGATAAGAAGCCATCCATCACAGTCGTCCAAGGGCCTAAACCTGGGAAACCTACCGATCTTTCAAGGATGCGCCACATACTGCTGAAGCTTAAGCACACCCCACCACCTCACATGATACCACCCCCTCCTGCCCCTGCCAAGGACGCCAAAGTTGGGAAGGATGGAAAAGACACCAAGGATGCCAAAGCTGGAAAGGACGGAAAAGACACCAAGAATGCTAAAGATACTGTAGCACCAAATGGGACTCCAGATGCACCTACCAGTGATGCCAAAGTTACTCAGACATCAGAAGAACCTACTGCTGCAGAATGATCGGCTTTTAGCCTAATTTCTTTAGTCTTTGATGTTGTAATGTGTTATCCTCTTACATATACTCTTTTTTCTCTATGAATTTTGTATCATTTACTATATTTTGTGTCATTCTACTACTATTCTATTGGTTCGTGACAGACATTAGCTGCATTTTGTTGCATTGGATGTCTGAGTTTGTTTATTGTACTATTTAGGTCCTTTCTTAACTGGAGGTGAATTCATTATTTTCTTGTTTACAGAAACCTTATATTTCTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U564873" ref_strand="+" ref_description="SGN-U564873 Tomato 200607#2 [5 ESTs aligned] (*GB) gi|147832855|emb|CAN72816.1| (e_value=3e-12) hypothetical; ">
      <seq>ctaaaacacaggctgctgaaagggctcttgttgctctgaagtctgagctggctcaattttctcacaagcgccagggttctccaagatcattgcagcagcagggattttctaataaaagattgaaacctgaatattctcggggtgtgcagcagagagtaccattgtctggtagattcccgaagaatacttccgctatgccatgaactatgtataaagatcttcacctctgcttgtacatcaaccccatagaaattttaacatacatgggaacatctgccgctgtgatttgtgaagccaattgggatctttactatgaatcactgtcctgctgtttcagctcgactatatccagtatgtacgctcacaatagaagcaagtgtctggatcgatagatcagaattgaatcaccttttgggagccaggtagttcaaatttgtgaactgtggatgtcttgctattttccatgtgattttgggagatctctaaaaagccacttagagcctggaatgagttcgcatcttcattcaagatgggtaccaaaagccgcatactttcgggagttcgttcttccggcatattgaatacaccttggccatgtccaatgcgtttttcggagtacactccaattttgacgatttcatagttaacttaggatatgattttgagaccttgcgcttttgtggtttcttccgcattttttagataccaaataggacaagtggaaaattttgttaagctgtaatttgcttactgtagtctatttttgctttgtttttttttttgtgtatccccagggtacaatttactgtccaaatgtaacatcctcaattgattaatgccatctttagttttcagcaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0127N23.1" temp_strand="-" temp_description="C02SLm0127N23.1  AC232778.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0127N23 sequenced_by:kribb upload_account_name:korea">
        <position start="20239" stop="18445"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20022" g_stop="20012" g_length="11"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="11" r_length="11" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20011" i_stop="19934" i_length="78">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19933" g_stop="19860" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="12" r_stop="85" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19859" i_stop="19515" i_length="345">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.792" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19514" g_stop="18746" g_length="769"/>
          <reference_exon_boundary r_type="cDNA" r_start="86" r_stop="857" r_length="772" r_score="0.948"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="858" polyA_stop="873"/>
      <MATCH_line gen_id="C02SLm0127N23.1" gen_strand="-" ref_id="SGN-U564873" ref_strand="+">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>854</cumulative_length_of_scored_exons>
        <coverage percentage="0.978" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0127N23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U564873" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20022" e_stop="20012"/>
          <exon e_start="19933" e_stop="19860"/>
          <exon e_start="19514" e_stop="18746"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAAAACACAGGTGCTTACTTTTTAAATTCCTCTCTTATCCCTTTTCTCTATGATTTTAAAATTTTGGGCTGCACATTTGTTTCTCTAGGCTGCTGAAAGGGCTCTTGTTGCTCTGAAGTCTGAGCTGGCTCAATTTTCTCACAAGCGCCAGGGTTCTCCAAGGCAAGTGATTTCAGGCATTTCACTTTTGAAACTAGACTAATGTAGTTTCCCCTATTTGGAAGGCAATTTTTTTCTTCTGGCCACCCAGTAAACCTAATGAAATTCTTTCTGTATATGTGTGGGTTTGGGGTGGGGGTGGGGATTCTGGTTTGTCTTTTTGCTGCCATCTGTTCATAATTTATATTTTTTTGCCTCCTTCGCATCTTGTTATTTAAGGGTGAGCGGGTATTGGATTTCTGATGAAGCCATTATCTTTATTTTAGAGCTGTGTTCTCCATGGCTTTGTTTTGGAGGTAAACCAGTATTAGCTTCTGATTGTGCATTTATTGTTGCTCTTTCATCCAGATCATTGCAGCAGCAGGGATTTTCTAATAAAAGATTGAAACCTGAATATTCTCGGGGTGTGCAGCAGAGAGTACCATTGTCTGGTAGATTCCCGAAGAATACTTCCGCTATGCCATGAACTATGTATAAAGATCTTCACCTCTGCTTGTACATCAACCCCATAGAAATTTTAACATACATGGGAACATCTGCCGCTGTGATTTGTGAAGCCAATTGGGATCTTTACTATGAATCACTGTCCTGCTGTTTCAGCTCGACTATATCCAGTATGTACGCTCACAATAGAAGCAAGTGTCTGGATCGATAGATCAGAATTGAATCACCTTTCGGGAGCCAGGTAGTTCAAATTTGTAAACTGTGGATGTCTTGCTATTTTCCATGTGATTTTGGGAGATCTCTAAAAAGCCAGTTAGAGCCTGGAATGAGTTCGCATCTTCATTCAAGATGGGCACCAAAAGCCGCATACTTTTGGGGAGTTAGTTCTTCCGGC--ATTGAATACACCTTGGCCATGTCCAATGCGTTTTCCGGAGTACACTCCAATTTTGACGATTTCATAGTTGATTTAGGATATGATTTTGAGACCTTTCGCTTTTGTGGTTTCTCCCGCATTTTTTAGATACCAAAATAGGACGAGTGGAAAATTTTGTTAAGCTGTAATTTGCTTACTGTGTAGTCTATTTTTGCATTG-----TTTTTT-TGTAGCCTCAGGGGTACAATTTAATGTCCAAATGTAACCTCCTCAATTGATTAATGGAATCTTTAGTTTTCAGCA</genome_strand>
        <mrna_strand>CTAAAACACAG..............................................................................GCTGCTGAAAGGGCTCTTGTTGCTCTGAAGTCTGAGCTGGCTCAATTTTCTCACAAGCGCCAGGGTTCTCCAAG.........................................................................................................................................................................................................................................................................................................................................................ATCATTGCAGCAGCAGGGATTTTCTAATAAAAGATTGAAACCTGAATATTCTCGGGGTGTGCAGCAGAGAGTACCATTGTCTGGTAGATTCCCGAAGAATACTTCCGCTATGCCATGAACTATGTATAAAGATCTTCACCTCTGCTTGTACATCAACCCCATAGAAATTTTAACATACATGGGAACATCTGCCGCTGTGATTTGTGAAGCCAATTGGGATCTTTACTATGAATCACTGTCCTGCTGTTTCAGCTCGACTATATCCAGTATGTACGCTCACAATAGAAGCAAGTGTCTGGATCGATAGATCAGAATTGAATCACCTTTTGGGAGCCAGGTAGTTCAAATTTGTGAACTGTGGATGTCTTGCTATTTTCCATGTGATTTTGGGAGATCTCTAAAAAGCCACTTAGAGCCTGGAATGAGTTCGCATCTTCATTCAAGATGGGTACCAAAAGCCGCATAC-TTTCGGGAGTTCGTTCTTCCGGCATATTGAATACACCTTGGCCATGTCCAATGCGTTTTTCGGAGTACACTCCAATTTTGACGATTTCATAGTTAACTTAGGATATGATTTTGAGACCTTGCGCTTTTGTGGTTTCTTCCGCATTTTTTAGATACC-AAATAGGACAAGTGGAAAATTTTGTTAAGCTGTAATTTGCTTAC--TGTAGTCTATTTTTGCTTTGTTTTTTTTTTTGTGTATCCCCA-GGGTACAATTTACTGTCCAAATGTAACATCCTCAATTGATTAATGCCATCTTTAGTTTTCAGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U600237" ref_strand="+" ref_description="SGN-U600237 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157327957|emb|CAO16921.1| (e_value=2e-86) unnamed; (*ATH) AT4G21670.1 (e_value=6e-84)  Symbol: None | similar to double-stranded RNA-binding domain (DsRBD)-containing protein [Arabidopsis thaliana] (TAIR:At5g01270.1); similar to OSJNBa0074L08.12 [Oryza sativa (japonica cultivar-group)] (GB:XP_473264.1); contains InterPro domain NLI in... ; ">
      <seq>ggtcaagcgttaccaggaggataaaattattttaaagcaatatgccgaaaatgatcaggttgttgacaatggaaaggtgatcagatctcagtctgaggttttccccgcattgtctgataatcaccaacctattgtcagacccctgattaggttgcaagatagaaacattattcttactcgtattaatccaatgatccgtgatactagtgttcttgtgagattgagacctgcttgggaggatctccgcagctatctgactgcaaggggtcggaagcgctttgaagtttatgtgtgcacaatggctgaaagagattatgctttagaaatgtggcgccttcttgatccagattcaaacttgattaactcacaagaactcttggatcgtattgtctgtgtcaagtctggcttgaggaaatctttgttcaatgtattccaagatggaaattgtcatcctaagatggcattggtgattgatgatcgcttgaaagtgtgggatgataaggatcaacctcgagtgcacgttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0127N23.1" temp_strand="-" temp_description="C02SLm0127N23.1  AC232778.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0127N23 sequenced_by:kribb upload_account_name:korea">
        <position start="27165" stop="25698"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26865" g_stop="26673" g_length="193"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="193" r_length="193" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="26672" i_stop="26411" i_length="262">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.823" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26410" g_stop="26200" g_length="211"/>
          <reference_exon_boundary r_type="cDNA" r_start="194" r_stop="404" r_length="211" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26199" i_stop="26118" i_length="82">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="26117" g_stop="25998" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="405" r_stop="524" r_length="120" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0127N23.1" gen_strand="-" ref_id="SGN-U600237" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>524</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0127N23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U600237" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26865" e_stop="26673"/>
          <exon e_start="26410" e_stop="26200"/>
          <exon e_start="26117" e_stop="25998"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTCAAGCGTTACCAGGAGGATAAAATTATTTTAAAGCAATATGCCGAAAATGATCAGGTTGTTGACAATGGAAAGGTGATCAGATCTCAGTCTGAGGTTTTCCCCGCATTGTCTGATAATCACCAACCTATTGTCAGACCCCTGATTAGGTTGCAAGATAGAAACATTATTCTTACTCGTATTAATCCAATGGTATGTGGACTTTGTACTCTATCGTCTATACCATGTTATCCCTGTTTTGTTAATCGTGTCATTTATGGTCCACTGATGACTAGTTGACAGCCAGATGAGGAATGCAAGTCATTTGTAGTCTTACGTTTACTGTTGAAAGGGGTTCAGTGATAGGACTATCCATTTCTTTCTCCCCTTCCTCTTTTGCATTAAACTGTTTTATGGTCTGTAGCTTTATCATACTTTTTTTGGGGGGATGCATCACATATTCTTTCCATGGCAGATCCGTGATACTAGTGTTCTTGTGAGATTGAGACCTGCTTGGGAGGATCTCCGCAGCTATCTGACTGCAAGGGGTCGGAAGCGCTTTGAAGTTTATGTGTGCACAATGGCTGAAAGAGATTATGCTTTAGAAATGTGGCGCCTTCTTGATCCAGATTCAAACTTGATTAACTCACAAGAACTCTTGGATCGTATTGTCTGTGTCAAGTCTGGCAAGTTTCTAAATTACAAAACTTTCGCTAGTGCATTGTTCTTTTTCTCTCTAATCACTGACTTTTCATGATTATTTTGTAGGCTTGAGGAAATCTTTGTTCAATGTATTCCAAGATGGAAATTGTCATCCTAAGATGGCATTGGTGATTGATGATCGCTTGAAAGTGTGGGATGATAAGGATCAACCTCGAGTGCACGTTG</genome_strand>
        <mrna_strand>GGTCAAGCGTTACCAGGAGGATAAAATTATTTTAAAGCAATATGCCGAAAATGATCAGGTTGTTGACAATGGAAAGGTGATCAGATCTCAGTCTGAGGTTTTCCCCGCATTGTCTGATAATCACCAACCTATTGTCAGACCCCTGATTAGGTTGCAAGATAGAAACATTATTCTTACTCGTATTAATCCAATG......................................................................................................................................................................................................................................................................ATCCGTGATACTAGTGTTCTTGTGAGATTGAGACCTGCTTGGGAGGATCTCCGCAGCTATCTGACTGCAAGGGGTCGGAAGCGCTTTGAAGTTTATGTGTGCACAATGGCTGAAAGAGATTATGCTTTAGAAATGTGGCGCCTTCTTGATCCAGATTCAAACTTGATTAACTCACAAGAACTCTTGGATCGTATTGTCTGTGTCAAGTCTG..................................................................................GCTTGAGGAAATCTTTGTTCAATGTATTCCAAGATGGAAATTGTCATCCTAAGATGGCATTGGTGATTGATGATCGCTTGAAAGTGTGGGATGATAAGGATCAACCTCGAGTGCACGTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U565855" ref_strand="+" ref_description="SGN-U565855 Tomato 200607#2 [3 ESTs aligned] ">
      <seq>gtgtaataagagatagagagagaaggagataagagagagaaagtacaaaattgacctttcactctgtgtggatctagggtttcacaaaacacagttgagccaccgcatcgtcatctacaccgccgtacaacaactactatctgaaaaatcatctaaaccctacttttaatcttctcttaatcatcatcttctataaagaaaccctaaaactttcatttttttgggtatttttttgggtaaatctgaatgaaatttgataaacgatgacgttttattggtagatttgataagatctgactttttttttcctgtttcgattggattttaagcataatttctagatcgatctatattgacgatganaaactgaaagggaaaggatagaaattggttttaatttttgaattttttgtgattacagagaaacaacgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0127N23.1" temp_strand="-" temp_description="C02SLm0127N23.1  AC232778.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0127N23 sequenced_by:kribb upload_account_name:korea">
        <position start="29643" stop="28612"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29343" g_stop="28912" g_length="432"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="432" r_length="432" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0127N23.1" gen_strand="-" ref_id="SGN-U565855" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>432</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0127N23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U565855" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29343" e_stop="28912"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGTAATAAGAGATAGAGAGAGAAGGAGATAAGAGAGAGAAAGTACAAAATTGACCTTTCACTCTGTGTGGATCTAGGGTTTCACAAAACACAGTTGAGCCACCGCATCGTCATCTACACCGCCGTACAACAACTACTATCTGAAAAATCATCTAAACCCTACTTTTAATCTTCTCTTAATCATCATCTTCTATAAAGAAACCCTAAAACTTTCATTTTTTTGGGTATTTTTTTGGGTAAATCTGAATGAAATTTGATAAACGATGACGTTTTATTGGTAGATTTGATAAGATCTGACTTTTTTTTTCCTGTTTCGATTGGATTTTAAGCATAATTTCTAGATCGATCTATATTGACGATGAGAAACTGAAAGGGAAAGGATAGAAATTGGTTTTAATTTTTGAATTTTTTGTGATTACAGAGAAACAACGC</genome_strand>
        <mrna_strand>GTGTAATAAGAGATAGAGAGAGAAGGAGATAAGAGAGAGAAAGTACAAAATTGACCTTTCACTCTGTGTGGATCTAGGGTTTCACAAAACACAGTTGAGCCACCGCATCGTCATCTACACCGCCGTACAACAACTACTATCTGAAAAATCATCTAAACCCTACTTTTAATCTTCTCTTAATCATCATCTTCTATAAAGAAACCCTAAAACTTTCATTTTTTTGGGTATTTTTTTGGGTAAATCTGAATGAAATTTGATAAACGATGACGTTTTATTGGTAGATTTGATAAGATCTGACTTTTTTTTTCCTGTTTCGATTGGATTTTAAGCATAATTTCTAGATCGATCTATATTGACGATGANAAACTGAAAGGGAAAGGATAGAAATTGGTTTTAATTTTTGAATTTTTTGTGATTACAGAGAAACAACGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U570314" ref_strand="+" ref_description="SGN-U570314 Tomato 200607#2 [11 ESTs aligned] (*GB) gi|157327958|emb|CAO16922.1| (e_value=0) unnamed; (*ATH) AT1G11060.1 (e_value=4e-171) | Symbol: None | expressed protein | chr1:3684568-3689844 FORWARD | Aliases: T19D16.5, T19D16_5; ">
      <seq>tcaaatcttcaaatcagagcaaactcacaacaacactttctataaaccctaatttcaggttccaaattacctcaaatttttggttttaataacgaaaatacatcaatattcgtgttctttagttgatctagttgcaggaattttgaattctccgtcggaaaatgatcgttagaacatacggccggcggagtagaagcatgtctcggagctactctgaatcagggttaaatgatgaagtttcggaacacacactttctcaggagaattctcaagatatttacagttttgggttttcatctcaagactcagttcactggtcgtcgaatttcaataattcagatccatacgatgtcggctcatctcaagggtgtcaagaattgtcgattttgccgtcaaggaaggaggatagggatttgggttttgagggtcatgatggggttttgtggaaacccaagaaagtaaagatgtttgattgggagacttatagtttgaattcatcacaagaatcggatgaattttcgtttttacccgatgggggggagtatggtggtcttgggaaatttgatgggggattacatgaaccaatgaaggtgaagaagactgggaagggtaaggaaaatggggttttgcagaagaagaagaagaaggtgaagtcgaaggagctgggattgccttcactggggcccacagcgactttgatggagactcaagaatgtggtgagatgatggaacatatggatgaggtgaattttgcgttggatggtttgaggaaagggcagcctgcgagaatcagaagggcgagtttattgtcattgctatctatatgtggaaaagctcagcagcgtcgccttttgcgggctcacgggatggcaaaaacaataattgatactgttttgggactcagctttgatgactcacctagcaaccttgctgcagcaggtctattctacattttgactagtgatggaggagatgaccatcttcttgattcacccagctgcattcgctttcttataaaattgttaagaccagttgctgctcctgcttccgtagcaaaggctccaactattgggagcaaacttttggcgatgcgcttagatgctgatgtgactcaagactctgtaaaaagcctagattctacttcgtcttcaataacccgcaaagtgcaggaggttcttatttcttgcaaggaaataaagccagatgatggaaatggacatgacacaccagaattaaacccaaaatggattagtttactgacaatggcaaaagcttgcttgtcgacaatctctattgaagatacttctggtactgtgcggagaagtaaggacaacttcaaagaaaagctgagagagcttggaggacttgatgcggtctttgacgtggcaagaagttgtcattctgttttggagggttggtcaaagaaaagttcacagtctatcgtagattctaaagataatacggccatagaaagtctggtgctactcttaaaatgttcgaagatcatggaaaatgcaacctttcttagtacggacaatcagaatcacttgcttcaaatgaaaggaaaatttgatagtctgaactccccaaagtcttttacaaagctaatcttaagtgtgatcaagattctctccggggcttacctgtgcagaacttcttttggaagttccaatgatggaaaagtctgtgacctttctgatggaactgctcgtgctttagaattacgttcactatcagataagaacgatggaagctgtcagattttgtgcattgattcctctacgacatgctatacaagtgaaggttcctgttcccagaagaacttgggtgaaactcaaactgatcagattggttcatccatatctagtttagaattcgctagcacctccacgagtgattcttggcagcttaaattgaggattgaatcttccaaatctgggtcatgtagtggaacctctgaggacttcagttttggggtcaacaagaattcatcaaaagtgaattttttgattggtgataatcaaaaaattaatggagacaagagacttgaacttatggaagagagtcaagatccttttgcttttgatgatgattttggaccttcacgatgggatttaatgtctactaagcaaaaggtgccggaaactcaaattaggcagacatcactttttgaacgtgatgatgaatacctatctcttattgtgccaagccagcaagagtctagttgccaggagaacaaaccacagtcaagtagcaaggagaacaatcaatctggtcagacctcttgttcttctgttgcagatgacgaaatgtcgacccttctggcagattgccttctcacagctgttaaggttctgatgaacttgacgaatgacaaccctgttggctgtcagcaaattgctgccggtggtggactagaagctttatctgctttgatcgccagccattttccgtccttcagcttgcatttggatcgtaatgggttatcaaaatcaagcgttggatctgatagtgatggccatctcaatgatcaagagctagattttcttgttgctattttgggtttgctggtcaatttggtagagaaggatggctgcaacaggtctagacttgcagctgctagtatttcattgcctggatcagaaggtttgtttaagggggagactcagacagatgttatccctctgctatgtgcaatctttctggaaaatcaaggggctggagaggctgctggggaaggaaaatgtttgcaatgggatgatgaagatgctgtactacagggggagaaagaagctgaaaaaatgattattgaagcatattcagctctccttcttgccttcctttcaactgagagcaagagcatacggcaggcaatcgctggttacttaccagatcataaattgtccattcttgtacctgtgctggagagatttgtggaattccacatgacactgaacatgatatcgccagagactcattcaacagtgcttgaagttatagaatcttgtagggttaggtgagactctattgtttccttttccttccgtgtcttttcctcgaagatggtaacaatgagactttgtacagcataaactacctttccctacagcattggtgcattagaaatcctatctcaggatttgtgtgtcatggcctttgtttgtctatggtttccctggtctttatagaaatatattcttccccctattttccagccaattgtttcaccatgttttggtgtgggctgagatacttgtacatgaagaaagattatgaatatgtatcacggttgtaatttgtagtaactttttagtgatggtttctttctctctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0127N23.1" temp_strand="+" temp_description="C02SLm0127N23.1  AC232778.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0127N23 sequenced_by:kribb upload_account_name:korea">
        <position start="33515" stop="44815"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33815" g_stop="34678" g_length="864"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="865" r_length="865" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="34679" i_stop="36624" i_length="1946">
            <donor d_prob="0.916" d_score="0.98"/>
            <acceptor a_prob="0.945" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36625" g_stop="36724" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="866" r_stop="965" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="36725" i_stop="37395" i_length="671">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="0.755" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="37396" g_stop="37729" g_length="334"/>
          <reference_exon_boundary r_type="cDNA" r_start="966" r_stop="1299" r_length="334" r_score="0.991"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="37730" i_stop="38333" i_length="604">
            <donor d_prob="0.881" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="38334" g_stop="38446" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="1300" r_stop="1412" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="38447" i_stop="38868" i_length="422">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.950" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="38869" g_stop="38997" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="1413" r_stop="1541" r_length="129" r_score="0.992"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="38998" i_stop="39084" i_length="87">
            <donor d_prob="0.990" d_score="0.98"/>
            <acceptor a_prob="0.959" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="39085" g_stop="39178" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="1542" r_stop="1635" r_length="94" r_score="0.989"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="39179" i_stop="39320" i_length="142">
            <donor d_prob="0.942" d_score="0.98"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="39321" g_stop="39431" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="1636" r_stop="1746" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="39432" i_stop="40382" i_length="951">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="40383" g_stop="40987" g_length="605"/>
          <reference_exon_boundary r_type="cDNA" r_start="1747" r_stop="2351" r_length="605" r_score="0.998"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="40988" i_stop="41241" i_length="254">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="41242" g_stop="41492" g_length="251"/>
          <reference_exon_boundary r_type="cDNA" r_start="2352" r_stop="2602" r_length="251" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="41493" i_stop="42913" i_length="1421">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.151" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="42914" g_stop="43067" g_length="154"/>
          <reference_exon_boundary r_type="cDNA" r_start="2603" r_stop="2756" r_length="154" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="43068" i_stop="43602" i_length="535">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="43603" g_stop="43700" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="2757" r_stop="2854" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="43701" i_stop="43787" i_length="87">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.938" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="43788" g_stop="43869" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="2855" r_stop="2936" r_length="82" r_score="1.000"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="43870" i_stop="44118" i_length="249">
            <donor d_prob="0.104" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="44119" g_stop="44515" g_length="397"/>
          <reference_exon_boundary r_type="cDNA" r_start="2937" r_stop="3333" r_length="397" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0127N23.1" gen_strand="+" ref_id="SGN-U570314" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>3332</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0127N23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U570314" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33815" e_stop="34678"/>
          <exon e_start="36625" e_stop="36724"/>
          <exon e_start="37396" e_stop="37729"/>
          <exon e_start="38334" e_stop="38446"/>
          <exon e_start="38869" e_stop="38997"/>
          <exon e_start="39085" e_stop="39178"/>
          <exon e_start="39321" e_stop="39431"/>
          <exon e_start="40383" e_stop="40987"/>
          <exon e_start="41242" e_stop="41492"/>
          <exon e_start="42914" e_stop="43067"/>
          <exon e_start="43603" e_stop="43700"/>
          <exon e_start="43788" e_stop="43869"/>
          <exon e_start="44119" e_stop="44515"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAATCTTCAAATCAGAGCAAACTCACAAC-ACACTTTCTATAAACCCTAATTTCAGGTTCCAAATTACCTCAAATTTTTGGTTTTAATAACGAAAATACATCAATATTCGTGTTCTTTAGTTGATCTAGTTGCAGGAATTTTGAATTCTCCGTCGGAAAATGATCGTTAGAACATACGGCCGGCGGAGTAGAAGCATGTCTCGGAGCTACTCTGAATCAGGGTTAAATGATGAAGTTTCGGAACACACACTTTCTCAGGAGAATTCTCAAGATATTTACAGTTTTGGGTTTTCATCTCAAGACTCAGTTCACTGGTCGTCGAATTTCAATAATTCAGATCCATACGATGTCGGCTCATCTCAAGGGTGTCAAGAATTGTCGATTTTGCCGTCAAGGAAGGAGGATAGGGATTTGGGTTTTGAGGGTCATGATGGGGTTTTGTGGAAACCCAAGAAAGTAAAGATGTTTGATTGGGAGACTTATAGTTTGAATTCATCACAAGAATCGGATGAATTTTCGTTTTTACCCGATGGGGGGGAGTATGGTGGTCTTGGGAAATTTGATGGGGGATTACATGAACCAATGAAGGTGAAGAAGACTGGGAAGGGTAAGGAAAATGGGGTTTTGCAGAAGAAGAAGAAGAAGGTGAAGTCGAAGGAGCTGGGATTGCCTTCACTGGGGCCCACAGCGACTTTGATGGAGACTCAAGAATGTGGTGAGATGATGGAACATATGGATGAGGTGAATTTTGCGTTGGATGGTTTGAGGAAAGGGCAGCCTGCGAGAATCAGAAGGGCGAGTTTATTGTCATTGCTATCTATATGTGGAACAGCTCAGCAGCGTCGCCTTTTGCGGGCTCACGGGTAGTTGAAATTTGGCTTATGAACATTATTTAGACTTTAGAATTTAGATGAGTATACATATTCGTGTTTCGATAAACATAAATCTTGGTTTTTTGAAAGCTTTGATCACAGTGTTTCTGAAATTTCTTAGGTAATTTGTATACACATTTATAGGACATAAATACATAAATATATCCAGATACATGAATTTTGATAAGCTGACCCAAAAATAAAAGTACAAAAATCATCTTCAAGTCTTGGACAAATTGTTCGAGCAAGAAAATCAATAGGGATGGTACTATGGCATGGAAATATGGTTGGTGGTGATTCATATAGACGAACCCAACTTGTTTGGGACCAAGGCGTAGTTGTTGTTGTTGTTGTTGTTGGGGCATGGCACTAGGACAGGAAAGCTTGGCAGATCAGGGGTGGAGAATTCTCACTCGGTGGTGGAAGGATATGTCTATTTCTTAAATGTTGTGTGTGAGGTGTAATTGTCTTCTAGTTTAATGTTTCCCTGTTCTTCCTTTATTTTAGACAATTGTGAATTCCATTACTCATTATAAGCCGACTTCTCCACCCTTCTCCACTTAAATAATAGAGTTGGTGTACTAACCAGGATATGAACTCGTTATGTGCTCTTACCACACTTCCCACGATGAACTTCCTTTTTTGTTGAACAAGAAGTCAGAACCTTGGGAGATCCATATCCTTCCTTTTAACATCCTTAATTCTCACTGCTCATATATAATTGTTGATGTTGAATGTCACTAGTGTTTATTTAGTAGACTAAAACTTTAATTTTCTTCTCAAATGAGATATTAAACACATAAGAGAAGAAACAATATTAGTTGATTGCTATTTTTACAACATGACCTCTAGAAAACGTAATAAATTAATTGAAATTATGAAAGAAGTAACGAAATAAAAGTAAAACAGTACTAATGTGCAAAAAATAGAGAGAAATGTATTTTAACTGTACCTTATAAAAAAAATAGAGAGAAATGTATTTTAATGGGGTGGAATGGGGCAAGGTGCAGAGCGTTGGAGGGGAAGAGGGTAGCATATTGGTCTCTCTGCAATGCGCCATTATCTTCCCTATAAATGAATCTAGTTGAGCTGATTTATCATGTTCAATTGGATAAAATTTTAGCTTATAATTAAGCAATTCAATGACAACTTCAGAAGCTCCTTAGGTAACAATGTTATGCTCTGGAATTTAAGGTTTACTTCTGCCATCTTGGGTCAGAGTATGTAAGAGAAGTTGTAATAGCAGGCAACCCAAGAAGAAGTGGATATGCCCAGCAAATGATCGTTGGAATTTCATGAGTAATTTTGAAGCTGTTACAGCAAGTTGCTGATATTGCAAGAGAATGCAACATTAAAGCGACAATATGTCTTATCTTTATAATTAGCTTGTATCTAACATCAACCTTGTAGTTTTTTTTGGTAGTTCGTAAAATTAGGTTCACGTAAACCATCGCATGAAGATCTCTTTGGCTTGTCTATGGAGAGGATATCCAGCCTAGGTTCATTATGAAGCTTTTACATTTGTAATTGGCTCAATGATCCTATTGTCCCTGTGGTAGCATTATGAATAAATCAGTGAGCTTGGATATGCTCAGAAATTGCCAATTAAGCCATTTAATGGGTGTTCTATTTAATTTGATGTTTTAGTATGTATATCATCAAGTCTTGAAGTACGTGCGCACTAGTAGTTGAGATAAATAATACTTTACACCTTATAGCAGTCATTGGTAACCCATATGGGGATGTCTTTTTGTTTTTAAATTTAGACATTCCTGATGTCTAAATTTCTGATAATCACAATCCCAATTACTTTACCTGAACATATAATCTTTCGGCTAATCCTGAATGTGTATGATTTTCCTTGAATTCAGTGGCCTGATTGTTAGTTGTCAACCTTTATTCTCAATTGGTATAACTTGCCAAGATTTTGATTTCAGGATGGCAAAAACAATAATTGATACTGTTTTGGGACTCAGCTTTGATGACTCACCTAGCAACCTTGCTGCAGCAGGTCTATTCTACATTTTGACTAGTGATGTAAGTTGCTTCATCTCTCTAGCAGTGTAGCCTCTCATTTGGACGTTAGTACTAAGTTATTGCATCTTCTGCATGACTTATCAGATAGGCAAAGGTTTTTCCCTGGCTCTAGTTGAAACAGGGTGAGGCAACCCAATTAAGCAAGTGAGGAGGCTGAACCTATTCATTAAATTTGAAAGATTGGATGATTATGTTTGGTAGTTCTGAAGTCCTTATTCTGTCTTCTAGCTGCCTAGTTATGAGTAACCTTTGCGTATGTGTGATTGGAAATAATTTCTTCTCAGTTGACTAGTCAGTTCTACATCAGACCTACTCTTTTAACTTGTCTTATTAGAAATGAGAACCATGGAATTGAAGAACTTTTCCTTTCCTTCTTTTCTTTTTGGTGGATTGCAAACAATTAACTGTGGATGCTCCTTCATCAACTGATATAATATTGTACTTTTAACTATTTTAGAGTTCATATTACTTCTTCCTCCATGTTATTGTATCTGTATGCTAAAATTACTCTTTCATTGCTTAAATTATTGGTTTAAGTTATTTCTGTTACATGTATTGTCTATACTTGCAACTTTTTAATTAACACAATGTCATTTACTATCTTATCATCTATATAAGTAATCTGGGAACTTCTCCATTCCTTACGTTTTTGATCTTCCAATGTTTTTTAGGGAGGAGATGACCATCTTCTTGATTCACCCAGCTGCATTCGCTTTCTTATAAAATTGTTAAGACCAGTTGCTGCTCCTGCTTCCGTAGCAAAGGCTCCAACTATTGGGAGCAAACTTTTGGCGATGCGCTTAGATGCTGATGTGACTCAAGACTCTGTAAAAGGCCTAGATTCTACTTCGTCTTCAATAACCCGCAAGGTGCAGGAGGTTCTTATTTCTTGCAAGGAAATAAAGCCAGATGATGGAAATGGACATGACAGACCAGAATTAAACCCAAAATGGATTAGTTTACTGACAATGGCAAAAGCTTGCTTGTCGACAATCTCTATTGAAGGTTTGTGAGGCACTTAAATTGGTCCTTTGAGGGATAATATTTCTTTGTTTCAAATGTTTTTTCTTCTTCCTGCAGTGGAAAATTCAAAGCTATTTAATATATATTCATCCTTTAGGTTGGGTGGGTTGGTTGCAATTTTGCTTTTGTTATTGGAAGTTAATCTGAGTAGCTTGTTATTCTTTTAACTTCTTGAGATTGCTTTTTGATTGCTACCTGTCTCCTACTAAGAGGTAAAAGTCAGAAAATAGAAGAGCTAAGTAGCTCTGTGTTTGCTTTTATATTGTATTTACGACTTATACAATGGTTTCCTGGTTATTTCCTTAATCTACATTTGTGTTATTTAGTGGCTGTTTCTTTCAAAACTGCAGATCTGACTCTTTTTCTGATTCTGGAAATTTTATCATATTATGTTCTAGAATCTTTTAGTGTGGTACTCTGATACCCATTTCTTCTGCCTGTGTTTCTTATAGTGGCTTACAATTGAATCATTTTTAAGAGATCATATGGAACTCAAGCTACCTTGACAGTGATTGATCTGTATTTCACCATTTTTGCATAGTATAACATAGTTTTCTTTTTCTTCTTTCTGTCTGTATTCACTCAGATACTTCTGGTACTGTGCGGAGAAGTAAGGACAACTTCAAAGAAAAGCTGAGAGAGCTTGGAGGACTTGATGCGGTCTTTGACGTGGCAAGAAGTTGTCATTCTGTTTTGGAGGTGTGAGCCTGTATGCTATTTTCTGTGTTGTTGCCAGAGACGAGTCTCATAAATTTGTGACATGTGAAGAACCAACAATATGCTCTATGTTCCTCTTATATTTAAGCTCTGAGTTGGAGTGGTAACATGACCATTTTGGATTGAAAGAACATGATCACTTGTGCTCCCTATCACCCTCTTCATATCCTTTGTTTTTGTCCAGAAGGTTTTAGATTGTGATTATAATTATATATATGCATGTCGAAGAGAATTTTGTATGGATTTGACGTTCATCTAGATCTTTTGGTGTACAAATTCTATCTGTGACTTCAAGGTTGTTATTTGAGTTATCCGTTTTTCGCCTTAACTCATGCTGTAATCAATAATCGGAAATTTAGATGGGTATTTTGATGTAATCTGCCCTGACATCATTTTCTCTGCAGGGTTGGTCAAAGAAAAGTTCACAGTCTATCGTAGATTCTAAAGATAATACGGCCATAGAAAGTCTGGTGCTACTCTTAAAATGTTTGAAGATCATGGAAAATGCAACCTTTCTTAGTACGGACAATCAGGTAACATGAATATACCTTCCTGTAGTAGACTGCCTTTCTGTACCCTTGAATTCCTGGATGTTGAGTTCACTACCTGTTTTGTTTCAGAATCACTTGCTTCAAATGAAAGGAAAATTTGATAGTCTGAACTCCCCAAGGTCTTTTACAAAGCTAATCTTAAGTGTGATCAAGATTCTCTCCGGTACTCCTGCCTCCTATCTTTTCATCCCAAATAAAAAAATTGACTCTACATTTTTGTTTTCCCTTAATCATTAACATATTGCATTTCTTTTGTCCCTTGGCTTATGATGCTTCCTGTCTGTCTGACTTGTTTGAATTTGTAGGGGCTTACCTGTGCAGAACTTCTTTTGGAAGTTCCAATGATGGAAAAGTCTGTGACCTTTCTGATGGAACTGCTCGTGCTTTAGAATTACGTTCACTATCAGATAAGAACGGTAAGCTGTTAATTTTTTCTTTCGGTGAATAGTTAAACTACTTGACAACAAGGCTGTTTCTATTTCATATCCATAAAAGAAATGTAGTAGGTAGGATTTTTTTTTTGGGTGGGAGGTGGGAATTAGTTAATTGAGTTGTTGAGGGTTGGAAGAATGGTTTAATTGATTTACACTTATCCTGGATAAACTTGTTCCCTTATCAATGTACCACTGCGTGTGAATCAATTTTGTGCTGATTGTAGCTTGCAAGGTCAAGAAAAAAGTCATGGTGTTGCTCTCAGAAGCTCAAAGTTCTAGTGACACAGAAATAGCCTCCCCACATCCTTCCCTCTTCTCTGGATTCTCTCACCCATGAACTGTGGTGTGTTAAATTAGAAACAACTTAAGTAAGAATAGGGTTTAGAGTTTGTGGTTCGTTGGCCCAATTTTGTGTCTCTTGATAGTTTAAAGATGCACCTTTGTTAGGGATGGAATTCATTTACAGAGTAGACTCTATTGTGAAAGTCAATTAAAGTTTATCAGGAGGATTCAGAATTTGTCTTTCTAACCGGGAAAAAAATATTGAAACATGAAATATCACCTTCAATACTGTTCATAGACAGCTTTAAACACTAACAGTAGGCATATCAATCTAACTCTTTAACTTTGTCACCTGTTCTTAAAGCAATTTAGTGCTAGCATTTGGCATTTAGGCAAGGAAAAGCTTGATTTAATAGTGAGTGTCCCTGTACCCCATGGCCATGAAAGTTTTTCTTCAGAGTGAAGGGGTCTCATAAAAATCTTTTCTTCCGTTGGATAAACATAAAAAACTATCCAATTTGAATTCTAGACTTTCTGGAATATGGTGGAAGGGCTACCAATCAAACAGAAAATTCCAGTTTGAATTTTTTATTAGCTAATGATACCTTAATTAGCTTTAGATGTTGAATACTTTCTCTTTTGTACTTCTAGATGGAAGCTGTCAGATTTTGTGCATTGATTCCTCTACGACATGCTATACAAGTGAAGGTTCCTGTTCCCAGAAGAACTTGGGTGAAACTCAAACTGATCAGATTGGTTCATCCATATCTAGTTTAGAATTCGCTAGCACCTCCACGAGTGATTCTTGGCAGCTTAAATTGAGGATTGAATCTTCCAAATCTGGGTCATGTAGTGGAACCTCTGAGGACTTCAGTTTTGGGGTCAACAAGAATTCATCAAAAGTGAATTTTTTGATTGGTGATAATCAAAGAATTAATGGAGACAAGAGACTTGAACTTATGGAAGAGAGTCAAGATCCTTTTGCTTTTGATGATGATTTTGGACCTTCACGATGGGATTTAATGTCTACTAAGCAAAAGGTGCCGGAAACTCAAATTAGGCAGACATCACTTTTTGAACGTGATGATGAATACCTATCTCTTATTGTGCCAAGCCAGCAAGAGTCTAGTTGCCAGGAGAACAAACCACAGTCAAGTAGCAAGGAGAACAATCAATCTGGTCAGACCTCTTGTTCTTCTGTTGCAGATGACGAAATGTCGACCCTTCTGGCAGATTGCCTTCTCACAGCTGTTAAGGTGATTTTTCTCACTTAATGTTAATAGTTTCTGTATGTTATAAGGCCATTTATGGTTCTTCTGGTTGTTGATTATGCTATTATTAAGCATGGCAGGCCATTTATCCGTTCTCCATGGTTCTGATAGTTGATTAAGAAACACATTGCTTTATGTTGGAATGATATAGTTGTACAAGTCAATGTTTTATATTGCTCAAACTTCTGTGCTATCTCTTGACATGCTAGTCTCTTAATACATATTCAATCAAATGACAGGTTCTGATGAACTTGACGAATGACAACCCTGTTGGCTGTCAGCAAATTGCTGCCGGTGGTGGACTAGAAGCTTTATCTGCTTTGATCGCCAGCCATTTTCCGTCCTTCAGCTTGCATTTGGATCGTAATGGGTTATCAAAATCAAGCGTTGGATCTGATAGTGATGGCCATCTCAATGATCAAGAGCTAGATTTTCTTGTTGCTATTTTGGGTTTGCTGGTCAATTTGGTAGAGAAGGATGGCTGCAACAGGTGAATATTTCCTTTTGATTTATACTTCAAGTTGTACACTGCAGGCTTTACATGATCGACTTTTGCGACTATTTACTTATCGCTGTATTTTGGATTTCTTTCCTAGCAGTTATTGAGCATTGAGAAAGTGACTGATAATTTGTTTGGGGAGTTGTTTGTAGTTTCTTCTTGATTATTTGATGCTTGCATATCCTTCCTTATTTGGTACCCATCATGGAATTCTTTCTGTCATGTGGATCATTTTTTGGATTGGGGCATGCTTATTGTTAGTCATGACAGATGCTACCTTGTATTCCTCTCTTGGTCTAAAGATCATGTTGTTTTTCTTATAAAGATGTTGATCTCAATCTCCCAACAGAACGCATTTAACTAGTTTTTAGGTCTATAAATAAATTTTTTTCTGAAGGAAAAATGGTTTCCAAATTCTTAGAAAAATACTAGGAATATTCCATATAGCAGTAATCCATGCATTCCAATTTAACTGTTTCCTATTAAATGGATGTGTTGTGGTAGGCTTTGAAGTTGGCAGAATATAAAATATTTGCGACCCTATGCTAGAGCAGGTCGTTAAGATATAAACTTCTCTTCATATAGAAATTGTTCCTACTCCCACCTTATATTTTTGCTGGACATGAAATCAAAAAGTATTTAATGGTGTGTAGGAGGGGGTCTAGAAACAAGTCTTGTAGGATTCACATTCTGAAACAAACAGCAGTTTTTTTTTTGCTTTCGTGTGCAAAAAATGCTCTTTCTTTTTGGCCTCGAAAAATTTATTTTCACGTGAATTTGTGATGCCATCTTTTGTAAAAATATGGACAACAGTCTTTGAGCATAATGACTATTTAAATGAATTAAGTGTACAGGTTATGCGCACATAGTGCCCCTATGAAGAATTGCACCTTATATACTGAAGACAACTGACATCTTTCAAATCTCCTTTTGGTAACTTATAAGCTTGTGTCATAGTGTCTCTGTTGCTAAAATTTCACGGAACCTCGTTTATTCTATTAAGGACTTAGTGAAATCTTGAAACAAGTAATATTTTCTCAGCATGGCTAGTTCAAAACGAGTATATATGCTGTTGAAAAGTGCAGAAAATCGATCTTCCCCAACAGATCATGCAGCAAATATTATCTGCTAACTGAGAGATGCGTCTTTGTTAAATTTTTCCATGCGTGATGATTACTCATTAGTTTTAAAAATTCATCACTTAAGCAAAGAAATCAAATTTAAAACAAAGAAGTACATCCTGGATTCATTAATTCAATCATTTAACATTGTCATTTAATAGTAGTTTGCTCATACTGGTATGCAGTTTCTTTTGCTGAGAATGAATTGTCGTTGTGATTTTCAGGTCTCACATTTTCACTTGCAGATGATAAAACACTGATAAACATTTTCACTCATTCTGCTAATGGCAGGTCTAGACTTGCAGCTGCTAGTATTTCATTGCCTGGATCAGAAGGTTTGTTTAAGGGGGAGACTCAGACAGATGTTATCCCTCTGCTATGTGCAATCTTTCTGGAAAATCAAGGGGCTGGAGAGGCTGCTGGGGAAGGAAAATGTTTGCAATGGGTATGCAAGATTGCTTTATCCAATTTTTCGTCTAAATCTCTAGTCCTTTTCTGATTTGCATGACTATTTTTATTTTGTGTGGTCCCGATTCTGGAATCTTTGGTTTTTTCCATACTGTTCTCTGTTTATTCTCCATATGATTCACAGAGAAGTCAACCACCTAGTGGTGAATCTAGAAGGCAATTCAAAATCTGATTCCTTGAGCTTGCTTTATCAAATTGATTAAGTATACTGAATGTTCATTAAAGTGTTCTCCATTTTCCAAATCTGCTTAGTGATGCCAGTTTTTGATTGTCAAATTCAACTTGCTTATATCACTAGAATTTTAGCTTCATGGCTCTTAACGGGACAGTGAGTTTAGCCGGATATAAAATCCACTTGGGATGGGGGGGGGGGGGGTAGGGGCAAGAGAGAGATTTCAGTTGATTGAGCATGAAGCACGGTTAAACTAGTCTTATCATATACTACCAGTTTGCTAGATTACTTTGAGCTTTGACCATGTGGCTACTAAATTGAATGTGGTTGTCTTGTACAGGATGATGAAGATGCTGTACTACAGGGGGAGAAAGAAGCTGAAAAAATGATTATTGAAGCATATTCAGCTCTCCTTCTTGCCTTCCTTTCAACTGAGAGGTTAGTTATGTCTTACAAAATTACTTTTTCTGTCTGTTATCTCTCACTCAAATGGTCTCTTATGTTCTTAATCTTTCTTTGAACCAGCAAGAGCATACGGCAGGCAATCGCTGGTTACTTACCAGATCATAAATTGTCCATTCTTGTACCTGTGCTGGAGAGATTTGTGGTATGTGATCTTGTGTGGTTCTTCTTTGAGTTGATCAAGCATGACAGTAGAAATTGTATAATTTAGTCCCAACTTCTACAATTTGCATCCAATATTTCAATGTTCTCTCATCAGCCATCGTCAGGAATGTCTCATTAGGGTCCTAGTCTCCTAGGCTTGGACGTAAATCTACAAGAAAAACTTCAGTATTGACGTTGCTTTCCTAGTGATTTTTATATGTATATATGTTAATTTGTGTTCTTCATCCAGGAATTCCACATGACACTGAACATGATATCGCCAGAGACTCATTCAACAGTGCTTGAAGTTATAGAATCTTGTAGGGTTAGGTGAGACTCTATTGTTTCCTTTTCCTTCCGTGTCTTTTCCTCGAAGATGGTAACAATGAGACTTTGTACAGCATAAACTACCTTTCCCTACAGCATTGGTGCATTAGAAATCCTATCTCAGGATTTGTGTGTCATGGCCTTTGTTTGTCTATGGTTTCCCTGGTCTTTATAGAAATATATTCTTCCCCCTATTTTCCAGCCAATTGTTTCACCATGTTTTGGTGTGGGCTGAGATACTTGTACATGAAGAAAGATTATGAATATGTATCACGGTTGTAATTTGTAGTAATTTTTTAGTGATGGTTTCTTTCTCTCTG</genome_strand>
        <mrna_strand>TCAAATCTTCAAATCAGAGCAAACTCACAACAACACTTTCTATAAACCCTAATTTCAGGTTCCAAATTACCTCAAATTTTTGGTTTTAATAACGAAAATACATCAATATTCGTGTTCTTTAGTTGATCTAGTTGCAGGAATTTTGAATTCTCCGTCGGAAAATGATCGTTAGAACATACGGCCGGCGGAGTAGAAGCATGTCTCGGAGCTACTCTGAATCAGGGTTAAATGATGAAGTTTCGGAACACACACTTTCTCAGGAGAATTCTCAAGATATTTACAGTTTTGGGTTTTCATCTCAAGACTCAGTTCACTGGTCGTCGAATTTCAATAATTCAGATCCATACGATGTCGGCTCATCTCAAGGGTGTCAAGAATTGTCGATTTTGCCGTCAAGGAAGGAGGATAGGGATTTGGGTTTTGAGGGTCATGATGGGGTTTTGTGGAAACCCAAGAAAGTAAAGATGTTTGATTGGGAGACTTATAGTTTGAATTCATCACAAGAATCGGATGAATTTTCGTTTTTACCCGATGGGGGGGAGTATGGTGGTCTTGGGAAATTTGATGGGGGATTACATGAACCAATGAAGGTGAAGAAGACTGGGAAGGGTAAGGAAAATGGGGTTTTGCAGAAGAAGAAGAAGAAGGTGAAGTCGAAGGAGCTGGGATTGCCTTCACTGGGGCCCACAGCGACTTTGATGGAGACTCAAGAATGTGGTGAGATGATGGAACATATGGATGAGGTGAATTTTGCGTTGGATGGTTTGAGGAAAGGGCAGCCTGCGAGAATCAGAAGGGCGAGTTTATTGTCATTGCTATCTATATGTGGAAAAGCTCAGCAGCGTCGCCTTTTGCGGGCTCACGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGCAAAAACAATAATTGATACTGTTTTGGGACTCAGCTTTGATGACTCACCTAGCAACCTTGCTGCAGCAGGTCTATTCTACATTTTGACTAGTGAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGAGATGACCATCTTCTTGATTCACCCAGCTGCATTCGCTTTCTTATAAAATTGTTAAGACCAGTTGCTGCTCCTGCTTCCGTAGCAAAGGCTCCAACTATTGGGAGCAAACTTTTGGCGATGCGCTTAGATGCTGATGTGACTCAAGACTCTGTAAAAAGCCTAGATTCTACTTCGTCTTCAATAACCCGCAAAGTGCAGGAGGTTCTTATTTCTTGCAAGGAAATAAAGCCAGATGATGGAAATGGACATGACACACCAGAATTAAACCCAAAATGGATTAGTTTACTGACAATGGCAAAAGCTTGCTTGTCGACAATCTCTATTGAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTTCTGGTACTGTGCGGAGAAGTAAGGACAACTTCAAAGAAAAGCTGAGAGAGCTTGGAGGACTTGATGCGGTCTTTGACGTGGCAAGAAGTTGTCATTCTGTTTTGGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTGGTCAAAGAAAAGTTCACAGTCTATCGTAGATTCTAAAGATAATACGGCCATAGAAAGTCTGGTGCTACTCTTAAAATGTTCGAAGATCATGGAAAATGCAACCTTTCTTAGTACGGACAATCAG.......................................................................................AATCACTTGCTTCAAATGAAAGGAAAATTTGATAGTCTGAACTCCCCAAAGTCTTTTACAAAGCTAATCTTAAGTGTGATCAAGATTCTCTCCG..............................................................................................................................................GGGCTTACCTGTGCAGAACTTCTTTTGGAAGTTCCAATGATGGAAAAGTCTGTGACCTTTCTGATGGAACTGCTCGTGCTTTAGAATTACGTTCACTATCAGATAAGAACG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAAGCTGTCAGATTTTGTGCATTGATTCCTCTACGACATGCTATACAAGTGAAGGTTCCTGTTCCCAGAAGAACTTGGGTGAAACTCAAACTGATCAGATTGGTTCATCCATATCTAGTTTAGAATTCGCTAGCACCTCCACGAGTGATTCTTGGCAGCTTAAATTGAGGATTGAATCTTCCAAATCTGGGTCATGTAGTGGAACCTCTGAGGACTTCAGTTTTGGGGTCAACAAGAATTCATCAAAAGTGAATTTTTTGATTGGTGATAATCAAAAAATTAATGGAGACAAGAGACTTGAACTTATGGAAGAGAGTCAAGATCCTTTTGCTTTTGATGATGATTTTGGACCTTCACGATGGGATTTAATGTCTACTAAGCAAAAGGTGCCGGAAACTCAAATTAGGCAGACATCACTTTTTGAACGTGATGATGAATACCTATCTCTTATTGTGCCAAGCCAGCAAGAGTCTAGTTGCCAGGAGAACAAACCACAGTCAAGTAGCAAGGAGAACAATCAATCTGGTCAGACCTCTTGTTCTTCTGTTGCAGATGACGAAATGTCGACCCTTCTGGCAGATTGCCTTCTCACAGCTGTTAAG..............................................................................................................................................................................................................................................................GTTCTGATGAACTTGACGAATGACAACCCTGTTGGCTGTCAGCAAATTGCTGCCGGTGGTGGACTAGAAGCTTTATCTGCTTTGATCGCCAGCCATTTTCCGTCCTTCAGCTTGCATTTGGATCGTAATGGGTTATCAAAATCAAGCGTTGGATCTGATAGTGATGGCCATCTCAATGATCAAGAGCTAGATTTTCTTGTTGCTATTTTGGGTTTGCTGGTCAATTTGGTAGAGAAGGATGGCTGCAACAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTAGACTTGCAGCTGCTAGTATTTCATTGCCTGGATCAGAAGGTTTGTTTAAGGGGGAGACTCAGACAGATGTTATCCCTCTGCTATGTGCAATCTTTCTGGAAAATCAAGGGGCTGGAGAGGCTGCTGGGGAAGGAAAATGTTTGCAATGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGATGAAGATGCTGTACTACAGGGGGAGAAAGAAGCTGAAAAAATGATTATTGAAGCATATTCAGCTCTCCTTCTTGCCTTCCTTTCAACTGAGAG.......................................................................................CAAGAGCATACGGCAGGCAATCGCTGGTTACTTACCAGATCATAAATTGTCCATTCTTGTACCTGTGCTGGAGAGATTTGTG.........................................................................................................................................................................................................................................................GAATTCCACATGACACTGAACATGATATCGCCAGAGACTCATTCAACAGTGCTTGAAGTTATAGAATCTTGTAGGGTTAGGTGAGACTCTATTGTTTCCTTTTCCTTCCGTGTCTTTTCCTCGAAGATGGTAACAATGAGACTTTGTACAGCATAAACTACCTTTCCCTACAGCATTGGTGCATTAGAAATCCTATCTCAGGATTTGTGTGTCATGGCCTTTGTTTGTCTATGGTTTCCCTGGTCTTTATAGAAATATATTCTTCCCCCTATTTTCCAGCCAATTGTTTCACCATGTTTTGGTGTGGGCTGAGATACTTGTACATGAAGAAAGATTATGAATATGTATCACGGTTGTAATTTGTAGTAACTTTTTAGTGATGGTTTCTTTCTCTCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U596613" ref_strand="-" ref_description="SGN-U596613 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157327960|emb|CAO16924.1| (e_value=3e-53) unnamed; (*ATH) AT3G51000.1 (e_value=1e-18) | Symbol: None | epoxide hydrolase, putative, similar to epoxide hydrolase (Glycine max) GI:2764806; contains Pfam profile PF00561: hydrolase, alpha/beta fold family | chr3:18956006-18957511 REVERSE | Aliases: F24M12.40; ">
      <seq>agtagtgaggaatgtatacatttttttctccagaagtgaattaccaatagccaatgaagatcaggaaatcatggacattgtgcaaccttcaactcccctgcccccttggttctcagaggaagacctggctgcgtatggagctttgtacgaaaaatctggattccgaactgcattgcaggttccctataggtcactgcatgaacaagtcaacataacagatccaaccgttcacattccagcactgtatattaagggagagaaagattatttcctcaaatttccaggcatcgaagattacattagtagtggagtcctcaaaagtttagtccctaatctgcagatagttaccttgccagaaggaacccattttgttcaagaacaactacctgacgaggttaatcaactcgtgctcgaattccttaccaaaaatagtaaggttcagtaagtcctcattgttgttgttgctccgtctactaagaacagaagctcgaataaggcattgttattgttgttgttgctctatctactaagaatagaagttcaaatgttgttttttcgattttctttcagtaagtcctagttgtgttctacatgtaatattttgctgcagtgaccctgcaattcctatgaaaagcaggcactgaaggatgaaattaccatgttatgaaagcaagggtccatctctctttctttgctatgttatattattataagagactgattaccttaaagtagagatttttcaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0127N23.1" temp_strand="-" temp_description="C02SLm0127N23.1  AC232778.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0127N23 sequenced_by:kribb upload_account_name:korea">
        <position start="46929" stop="44998"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46629" g_stop="46441" g_length="189"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="189" r_length="189" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46440" i_stop="45861" i_length="580">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="45860" g_stop="45304" g_length="557"/>
          <reference_exon_boundary r_type="cDNA" r_start="190" r_stop="741" r_length="552" r_score="0.944"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="745" polyA_stop="757"/>
      <MATCH_line gen_id="C02SLm0127N23.1" gen_strand="-" ref_id="SGN-U596613" ref_strand="-">
        <total_alignment_score>0.954</total_alignment_score>
        <cumulative_length_of_scored_exons>746</cumulative_length_of_scored_exons>
        <coverage percentage="0.985" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0127N23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U596613" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="46629" e_stop="46441"/>
          <exon e_start="45860" e_stop="45304"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTAGTGAGGAATGTATACATTCTTTTCTCCAGAAGTGAATTACCAATAGCCAATGAAGATCAGGAAATCATGGACATTGTGCAACCTTCAACTCCTCTGCCCCCTTGGTTCTCCGAGGAAGACCTGGCTGCGTATGGAGCTTTGTACGAAAAATCTGGATTCCGAACTGCATTGCAGGTTCCCTATAGGTATCATGCACTAACATCTACTGTATGTTTATTCTATCTTGCTTAGAGTCTTCAAAAATACTGTTGGTTATGTGTCGGATCCTCCAAAACCTGTGTATCTTTAGAGGATCTGACACTGGTGCAACAACGTTTTTAAATAGGAGGGGCCCTAACAATATAGGTTTTATTTGAACCGGAATTTCCCCATTCACTACCCTCTTATCTCACTCTCATACACTATACCAACATCATTGTGGTAGTCATTCACAGCCCTGGTCTGGAGATGCAGACTTTCTTTTTTTGATAACCGACAAATATTGGAGGGAGAATGGTGCACCTTTAGAACTCGGTGGTTAATCGGTCCAACTCTACTGTACTAGCATTCATGAAAGTACAAGCAAATTCAAGATATAGCCTTATAGGAATTGCACATGAGAGTTTATGAGAAAATGCATCAACTTTGTAAAATAGTCGAGGTGTTTGCAAGCTGACTCGAACAACCATTATAAAAGAAAAAGAAATTATAGGATTTCTTTTGCTTGTTGATTAATACTGAACCTCTTCCTTTTCTTAGTTGTTTATGAATTTCATCTTGCAATAGGTCACTGCATGAACAAGTCAACATAACAGATCCAACCGTTCACGTTCAAGCACTGTATATTAAGGGAGAGAAAGATTATTTCCTCAAATTTCCAGGCATCGAAGATTACATTAGTAGTGGAGTCCTCAAAAGTTTAGTCCCTAATCTGCAGATAGTTAACTTGCCAGAAGGAAACCATTTTGTTCAAGAACAACTACCTGACGAGGTTAATCAACTCGTGCTCGAATTTCTTACCAAAAATAGTAAGGTTCAGTAAGTCCTCATTGTTGTTGCTGCTCCGTCTACTAAGAACAGAAGCTCCAATAAGGCGTTGTTATTGTTGTTGTTGCTCTATCTACTAAGGAATAGAAGTTCAAATAAGTTGTTGTTTCAATTTTCGTTCAGTAAGTCCTAGTTGTGTTTTACATGTAATATTTTGCTGCAGTGACCCTGCAATTCCTATAAAAAGCAAGGCACTGAAAGGTGAAATTACCATGTTATGAAAGCTTTGTTCCATCTCTCTTTCTTTGCTATGTTATATTATGAATGTTAACTGATTACCTTAAAAGTAGAGATTT</genome_strand>
        <mrna_strand>AGTAGTGAGGAATGTATACATTTTTTTCTCCAGAAGTGAATTACCAATAGCCAATGAAGATCAGGAAATCATGGACATTGTGCAACCTTCAACTCCCCTGCCCCCTTGGTTCTCAGAGGAAGACCTGGCTGCGTATGGAGCTTTGTACGAAAAATCTGGATTCCGAACTGCATTGCAGGTTCCCTATAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCACTGCATGAACAAGTCAACATAACAGATCCAACCGTTCACATTCCAGCACTGTATATTAAGGGAGAGAAAGATTATTTCCTCAAATTTCCAGGCATCGAAGATTACATTAGTAGTGGAGTCCTCAAAAGTTTAGTCCCTAATCTGCAGATAGTTACCTTGCCAGAAGGAACCCATTTTGTTCAAGAACAACTACCTGACGAGGTTAATCAACTCGTGCTCGAATTCCTTACCAAAAATAGTAAGGTTCAGTAAGTCCTCATTGTTGTTGTTGCTCCGTCTACTAAGAACAGAAGCTCGAATAAGGCATTGTTATTGTTGTTGTTGCTCTATCTACTAA-GAATAGAAGTTCAAAT--GTTGTTTTTTCGATTTTCTTTCAGTAAGTCCTAGTTGTGTTCTACATGTAATATTTTGCTGCAGTGACCCTGCAATTCCTATGAAAAGC-AGGCACTGAAGGATGAAATTACCATGTTATGAAAGCAAGGGTCCATCTCTCTTTCTTTGCTATGTTATATTATTATAAGAGACTGATTACCTT-AAAGTAGAGATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U596617" ref_strand="+" ref_description="SGN-U596617 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157327959|emb|CAO16923.1| (e_value=1e-51) unnamed; (*ATH) AT3G51000.1 (e_value=5e-13) | Symbol: None | epoxide hydrolase, putative, similar to epoxide hydrolase (Glycine max) GI:2764806; contains Pfam profile PF00561: hydrolase, alpha/beta fold family | chr3:18956006-18957511 REVERSE | Aliases: F24M12.40; ">
      <seq>caacacttataaaaccactcttcgtcgatcttgtcaatggcctccttgcacttcttgatgctctaaagatctctaacgttttgctcgagggaaaagactttggatcttttgccttttcaaattttaccttgctcggcggagcgatagtctctggatttattgttgtgggggtgccaatttttgcctccaaaacctcttgagtttaaaaaaggcctccctgaaggattcgatttttcgagctttgggatacctgggagagctgaagctgattttggtcgtcttgacgccaaaacagtagtgaggaatgtatacattcttttctccagaagtgaattaccaatagccaatgaagatcaggaaatcatggacattgtgcaaccttcaactcctctgcccccttggttctccgaggaagacctggctgcgtatggagctttgtacgaaaaatctggattccgaactgcattgcaggttccctataggtcactgcatgaacaagtcaacataacagatccaaccgttcacgtttcaacactgtatattaggggagagaaagattatttcctcaaattttccggcatcgaaaaatac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0127N23.1" temp_strand="-" temp_description="C02SLm0127N23.1  AC232778.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0127N23 sequenced_by:kribb upload_account_name:korea">
        <position start="47469" stop="45452"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47169" g_stop="47095" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="77" r_length="77" r_score="0.813"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="47094" i_stop="46944" i_length="151">
            <donor d_prob="1.000" d_score="0.90"/>
            <acceptor a_prob="0.848" a_score="0.82"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46943" g_stop="46776" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="78" r_stop="246" r_length="169" r_score="0.857"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="46775" i_stop="46677" i_length="99">
            <donor d_prob="0.945" d_score="0.94"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="46676" g_stop="46441" g_length="236"/>
          <reference_exon_boundary r_type="cDNA" r_start="247" r_stop="482" r_length="236" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="46440" i_stop="45861" i_length="580">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="45860" g_stop="45752" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="483" r_stop="591" r_length="109" r_score="0.927"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0127N23.1" gen_strand="-" ref_id="SGN-U596617" ref_strand="+">
        <total_alignment_score>0.922</total_alignment_score>
        <cumulative_length_of_scored_exons>588</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0127N23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U596617" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47169" e_stop="47095"/>
          <exon e_start="46943" e_stop="46776"/>
          <exon e_start="46676" e_stop="46441"/>
          <exon e_start="45860" e_stop="45752"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAC-CCGAGAAAACCAC-ATTCCTCGATCTTGTCAGTGACCTCCTTGCACTTCTTGATGCTCTTAATATCTCTAAGGTACTTTTAATCTTCTTAGATTAGTGTTTGGTGAAATCATAATTCTTTATAGCTCCACCATATAAAGTTTGCTGGATAGAAATTTTAGTTTTTATTAAGTTTAATTATATCTTTGTTCCTATTTCATCTCTGTGTCTGCTCAATAATGTAGGTTTTTCTCGTTGGTAAAGACTTTGGATCTTTTGTCATTTCGTATTTTTCCATTCTCCACAAGGAGAGAGTCTCTGGATTTATTGTTATGGGGGTGCC-ATTTTTGCCTCCAAAACCTCTTGAGTTTAAAAAAGGCCTCCCTGAAGGATTCTATATTTCGAGATTTGGGGTATGTTAATATGTTTTTGATCTCTAATTTGCTTTCGTATCATTAATAGAGCTCTCTCTTGGTCAATTTTACATAGGTATACATTTTAATTGTTTGCAGATACCTGGGAGAGCTGAAGCTGATTTTGGTCGTCTTGACGCCAAAACAGTAGTGAGGAATGTATACATTCTTTTCTCCAGAAGTGAATTACCAATAGCCAATGAAGATCAGGAAATCATGGACATTGTGCAACCTTCAACTCCTCTGCCCCCTTGGTTCTCCGAGGAAGACCTGGCTGCGTATGGAGCTTTGTACGAAAAATCTGGATTCCGAACTGCATTGCAGGTTCCCTATAGGTATCATGCACTAACATCTACTGTATGTTTATTCTATCTTGCTTAGAGTCTTCAAAAATACTGTTGGTTATGTGTCGGATCCTCCAAAACCTGTGTATCTTTAGAGGATCTGACACTGGTGCAACAACGTTTTTAAATAGGAGGGGCCCTAACAATATAGGTTTTATTTGAACCGGAATTTCCCCATTCACTACCCTCTTATCTCACTCTCATACACTATACCAACATCATTGTGGTAGTCATTCACAGCCCTGGTCTGGAGATGCAGACTTTCTTTTTTTGATAACCGACAAATATTGGAGGGAGAATGGTGCACCTTTAGAACTCGGTGGTTAATCGGTCCAACTCTACTGTACTAGCATTCATGAAAGTACAAGCAAATTCAAGATATAGCCTTATAGGAATTGCACATGAGAGTTTATGAGAAAATGCATCAACTTTGTAAAATAGTCGAGGTGTTTGCAAGCTGACTCGAACAACCATTATAAAAGAAAAAGAAATTATAGGATTTCTTTTGCTTGTTGATTAATACTGAACCTCTTCCTTTTCTTAGTTGTTTATGAATTTCATCTTGCAATAGGTCACTGCATGAACAAGTCAACATAACAGATCCAACCGTTCACGTTCAAGCACTGTATATTAAGGGAGAGAAAGATTATTTCCTCAAATTTCCAGGCATCGAAGATTAC</genome_strand>
        <mrna_strand>CAACACTTATAAAACCACTCTTCGTCGATCTTGTCAATGGCCTCCTTGCACTTCTTGATGCTCTAAAGATCTCTAAC.......................................................................................................................................................GTTTTGCTCGAGGGAAAAGACTTTGGATCTTTTGCCTTTTCAAATTTTACCTTGCTCGGCGGAGCGATAGTCTCTGGATTTATTGTTGTGGGGGTGCCAATTTTTGCCTCCAAAACCTCTTGAGTTTAAAAAAGGCCTCCCTGAAGGATTCGATTTTTCGAGCTTTGGG...................................................................................................ATACCTGGGAGAGCTGAAGCTGATTTTGGTCGTCTTGACGCCAAAACAGTAGTGAGGAATGTATACATTCTTTTCTCCAGAAGTGAATTACCAATAGCCAATGAAGATCAGGAAATCATGGACATTGTGCAACCTTCAACTCCTCTGCCCCCTTGGTTCTCCGAGGAAGACCTGGCTGCGTATGGAGCTTTGTACGAAAAATCTGGATTCCGAACTGCATTGCAGGTTCCCTATAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCACTGCATGAACAAGTCAACATAACAGATCCAACCGTTCACGTTTCAACACTGTATATTAGGGGAGAGAAAGATTATTTCCTCAAATTTTCCGGCATCGAAAAATAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U596614" ref_strand="+" ref_description="SGN-U596614 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157327959|emb|CAO16923.1| (e_value=4e-75) unnamed; (*ATH) AT3G51000.1 (e_value=1e-29) | Symbol: None | epoxide hydrolase, putative, similar to epoxide hydrolase (Glycine max) GI:2764806; contains Pfam profile PF00561: hydrolase, alpha/beta fold family | chr3:18956006-18957511 REVERSE | Aliases: F24M12.40; (*SWP) sp|P34913|HYES_HUMAN (e_value=1e-20) Epoxide hydrolase 2 OS=Homo sapiens GN=EPHX2; ">
      <seq>ggaagaaatagagcacaaatacattgaagtgaatggtctaaagctccatatagctgaaattggaagtgggttttctccagttgtggtgttcttacatggattccctgaaatttggtattcttggaggtaccatatgaaagctgtacctaaagcgggatacacagctattgcacccgattacacaggatatgggttatcggatcaaccaacccaacccgagaaaaccacattcctcgatcttgtcagagacctccttgcacttcttgatgctcttaatatctctaaggtttttctcgatggtaaagactttggatcttttgtcatttcgtatttttccattctccacaaggagagagtctctggatttattgttatgggggtgccatttttgcctcctcaacctcttgagtttaaaaaaggcctccctgaaggattctatatttcgagatttgggatacctgggagagctgaagctgattttggtcgtcttgacgccgatacagtattgaggaatgtatacattcttttctccaaaaatgaattaccaatagccaatgaagatcaagaaatcatggatattgtgcaaccttcaactcctctgcccccttgtattctcccatgaagatctggctgcgtatggacctttgtacgacatatttggattcttaactgcattgcaagttctctataagtcactgcatgaacatgtcaacataacagatccctccgatcacgttcaagcactgtatattaagggagataaagattatttcctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0127N23.1" temp_strand="-" temp_description="C02SLm0127N23.1  AC232778.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0127N23 sequenced_by:kribb upload_account_name:korea">
        <position start="47680" stop="45476"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47380" g_stop="47095" g_length="286"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="286" r_length="286" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="47094" i_stop="46944" i_length="151">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.848" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46943" g_stop="46776" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="287" r_stop="454" r_length="168" r_score="0.982"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="46775" i_stop="46677" i_length="99">
            <donor d_prob="0.945" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="46676" g_stop="46441" g_length="236"/>
          <reference_exon_boundary r_type="cDNA" r_start="455" r_stop="691" r_length="237" r_score="0.907"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="46440" i_stop="45861" i_length="580">
            <donor d_prob="0.985" d_score="0.82"/>
            <acceptor a_prob="0.969" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="45860" g_stop="45776" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="692" r_stop="776" r_length="85" r_score="0.941"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0127N23.1" gen_strand="-" ref_id="SGN-U596614" ref_strand="+">
        <total_alignment_score>0.954</total_alignment_score>
        <cumulative_length_of_scored_exons>775</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0127N23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U596614" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47380" e_stop="47095"/>
          <exon e_start="46943" e_stop="46776"/>
          <exon e_start="46676" e_stop="46441"/>
          <exon e_start="45860" e_stop="45776"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAGAAATAGAGCACAAATACATTGAAGTGAATGGTCTAAAGCTCCATATAGCTGAAATTGGAAGTGGGTTTTCTCCAGTTGTGGTGTTCTTACATGGATTCCCTGAAATTTGGTATTCTTGGAGGTACCAGATGAAAGCTGTAGCTAAAGCGGGTTACAGAGCTATTGCACCCGATTACAGAGGATATGGGTTATCGGATCAACCAACCCAACCCGAGAAAACCACATTCCTCGATCTTGTCAGTGACCTCCTTGCACTTCTTGATGCTCTTAATATCTCTAAGGTACTTTTAATCTTCTTAGATTAGTGTTTGGTGAAATCATAATTCTTTATAGCTCCACCATATAAAGTTTGCTGGATAGAAATTTTAGTTTTTATTAAGTTTAATTATATCTTTGTTCCTATTTCATCTCTGTGTCTGCTCAATAATGTAGGTTTTTCTCGTTGGTAAAGACTTTGGATCTTTTGTCATTTCGTATTTTTCCATTCTCCACAAGGAGAGAGTCTCTGGATTTATTGTTATGGGGGTGCCATTTTTGCCTCCAAAACCTCTTGAGTTTAAAAAAGGCCTCCCTGAAGGATTCTATATTTCGAGATTTGGGGTATGTTAATATGTTTTTGATCTCTAATTTGCTTTCGTATCATTAATAGAGCTCTCTCTTGGTCAATTTTACATAGGTATACATTTTAATTGTTTGCAGATACCTGGGAGAGCTGAAGCTGATTTTGGTCGTCTTGACGCCAAAACAGTAGTGAGGAATGTATACATTCTTTTCTCCAGAAGTGAATTACCAATAGCCAATGAAGATCAGGAAATCATGGACATTGTGCAACCTTCAACTCCTCTGCCCCCTTG-GTTCTCCGAGGAAGACCTGGCTGCGTATGGAGCTTTGTACGAAAAATCTGGATTCCGAACTGCATTGCAGGTTCCCTATAGGTATCATGCACTAACATCTACTGTATGTTTATTCTATCTTGCTTAGAGTCTTCAAAAATACTGTTGGTTATGTGTCGGATCCTCCAAAACCTGTGTATCTTTAGAGGATCTGACACTGGTGCAACAACGTTTTTAAATAGGAGGGGCCCTAACAATATAGGTTTTATTTGAACCGGAATTTCCCCATTCACTACCCTCTTATCTCACTCTCATACACTATACCAACATCATTGTGGTAGTCATTCACAGCCCTGGTCTGGAGATGCAGACTTTCTTTTTTTGATAACCGACAAATATTGGAGGGAGAATGGTGCACCTTTAGAACTCGGTGGTTAATCGGTCCAACTCTACTGTACTAGCATTCATGAAAGTACAAGCAAATTCAAGATATAGCCTTATAGGAATTGCACATGAGAGTTTATGAGAAAATGCATCAACTTTGTAAAATAGTCGAGGTGTTTGCAAGCTGACTCGAACAACCATTATAAAAGAAAAAGAAATTATAGGATTTCTTTTGCTTGTTGATTAATACTGAACCTCTTCCTTTTCTTAGTTGTTTATGAATTTCATCTTGCAATAGGTCACTGCATGAACAAGTCAACATAACAGATCCAACCGTTCACGTTCAAGCACTGTATATTAAGGGAGAGAAAGATTATTTCCTC</genome_strand>
        <mrna_strand>GGAAGAAATAGAGCACAAATACATTGAAGTGAATGGTCTAAAGCTCCATATAGCTGAAATTGGAAGTGGGTTTTCTCCAGTTGTGGTGTTCTTACATGGATTCCCTGAAATTTGGTATTCTTGGAGGTACCATATGAAAGCTGTACCTAAAGCGGGATACACAGCTATTGCACCCGATTACACAGGATATGGGTTATCGGATCAACCAACCCAACCCGAGAAAACCACATTCCTCGATCTTGTCAGAGACCTCCTTGCACTTCTTGATGCTCTTAATATCTCTAAG.......................................................................................................................................................GTTTTTCTCGATGGTAAAGACTTTGGATCTTTTGTCATTTCGTATTTTTCCATTCTCCACAAGGAGAGAGTCTCTGGATTTATTGTTATGGGGGTGCCATTTTTGCCTCCTCAACCTCTTGAGTTTAAAAAAGGCCTCCCTGAAGGATTCTATATTTCGAGATTTGGG...................................................................................................ATACCTGGGAGAGCTGAAGCTGATTTTGGTCGTCTTGACGCCGATACAGTATTGAGGAATGTATACATTCTTTTCTCCAAAAATGAATTACCAATAGCCAATGAAGATCAAGAAATCATGGATATTGTGCAACCTTCAACTCCTCTGCCCCCTTGTATTCTCCCATGAAGATCTGGCTGCGTATGGACCTTTGTACGACATATTTGGATTCTTAACTGCATTGCAAGTTCTCTATAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCACTGCATGAACATGTCAACATAACAGATCCCTCCGATCACGTTCAAGCACTGTATATTAAGGGAGATAAAGATTATTTCCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U596616" ref_strand="+" ref_description="SGN-U596616 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157327960|emb|CAO16924.1| (e_value=6e-18) unnamed; (*ATH) AT4G15960.1 (e_value=2e-16) | Symbol: None | epoxide hydrolase, putative, similar to epoxide hydrolase (Solanum tuberosum) GI:407944; contains Pfam profile PF00561: hydrolase, alpha/beta fold family | chr4:9045638-9047463 REVERSE | Aliases: DL4016C, FCAALL.242; ">
      <seq>cagatagagcacaaatacattgaagtgaatggtctaaagctccatatagctgaaattggaagtgggttttctccagttgtggtgttcttacatggattccctgaaatttggtattctcggaggtaccagatgagagctagcgctaatgcctgttacagagctattgcacccgattacagaggatatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0127N23.1" temp_strand="-" temp_description="C02SLm0127N23.1  AC232778.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0127N23 sequenced_by:kribb upload_account_name:korea">
        <position start="47675" stop="46890"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47376" g_stop="47190" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="187" r_length="187" r_score="0.947"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0127N23.1" gen_strand="-" ref_id="SGN-U596616" ref_strand="+">
        <total_alignment_score>0.947</total_alignment_score>
        <cumulative_length_of_scored_exons>187</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0127N23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U596616" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47376" e_stop="47190"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAATAGAGCACAAATACATTGAAGTGAATGGTCTAAAGCTCCATATAGCTGAAATTGGAAGTGGGTTTTCTCCAGTTGTGGTGTTCTTACATGGATTCCCTGAAATTTGGTATTCTTGGAGGTACCAGATGAAAGCTGTAGCTAAAGCGGGTTACAGAGCTATTGCACCCGATTACAGAGGATATG</genome_strand>
        <mrna_strand>CAGATAGAGCACAAATACATTGAAGTGAATGGTCTAAAGCTCCATATAGCTGAAATTGGAAGTGGGTTTTCTCCAGTTGTGGTGTTCTTACATGGATTCCCTGAAATTTGGTATTCTCGGAGGTACCAGATGAGAGCTAGCGCTAATGCCTGTTACAGAGCTATTGCACCCGATTACAGAGGATATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U568786" ref_strand="+" ref_description="SGN-U568786 Tomato 200607#2 [6 ESTs aligned] (*GB) gi|157327961|emb|CAO16925.1| (e_value=0) unnamed; (*ATH) AT1G61040.1 (e_value=1e-170) | Symbol: None | plus-3 domain-containing protein, contains Pfam profile PF03126: Plus-3 domain | chr1:22486872-22489634 FORWARD | Aliases: T7P1.17, T7P1_17; (*SWP) sp|Q5RAD5|RTF1_PONAB (e_value=2e-26) RNA polymerase-associated protein RTF1 homolog OS=Pongo abelii GN=RTF1; ">
      <seq>catttctctccggcgaactccttatcggcgagatcaattcaagtggctgagtggaatagaagaccatggaagaagagttaactgatttactgttggaggctgctggtagaacaaatactggtggaaggaatcgtccacctcattcatctaaaagacatcacaagagttcatattctgatgatggaagtgattccagggatgatgactctgatgatggtcgtgggtattcaggtcgaaagctttctggttcacaagttcctctcaagaagagattggaccctcaagaaagagatgatgatcatagcagccatggagaaggcaatgatggagatggttatggcaatgagagtgatgatgattctattggcagtgatctttacaaggacgatgatgaccggcaaaagcttgctcagatgactgaactggaaagggaaatgatattgactgatcgtgcagcgaagaaatctgacaggagtctgcatgacaaaatgatcaaggatcgggcccaaccaaggaaacaaagctcacctccttcacattctcgtggcatgcgctcatcaacaagagctttggatagggcagctgacagagatgatgcattgaatgagatacgagcaaaacgagcaagacagcagcaggatcccgagggtcaattcaagctgagggatgcagctagaaaaggttctggaagcaggggctattcacctatcaaacgtagaagttttacagctgcatctctaggtagcagtcctaccaggggagaaagtgattcacatagtaatgagggagattcatcagctgatgatggaatggatgacagtgatgatgacaagtcatcaccggagtcacagttgccaacatttgaggatataaaagaaatctctattcgtcgttcaaaactggcaaaatggtttatggagcccttctttgatgagttaattgtgggttgctttgtaagagttggcattgggaggtcaaggtctggtcctatctataggctctgtgtggtccgcaatgttgatgcttcagatcctaatcgacaatacaagctagaaaataaaaccacatccaaatttctaaatgttgtttggggcaatgaaaactctgctgctaggtggcagatggctatgatttcagactctcctcctctgagggatgagtttgatcagtgggtaagggaagtagaacgaagtggtggtcgtatgcctagtaagcaagatgtgttggaaaaaaaagaggccatacagaaatctaacacatttgtttactctgctgacactgtaaagcagatgttgcagcagaaaaaatctgcaacatggaggccacttaatgttgctgctgagaaggatcgtttgagaagggatatggaagtggccaaaatgaagaatgacgaagcagaagtggagaggattaaggcaagactgcaggaactggaggatagcaggaaggttcaagagaaagatgacaaggcccgcaggctggctgagatgaaccggaagaatagggtcgagaatttcaaaaatgcatcagaactcagaccagtgaatcaactgttgaaagctggtgaggctgggtatgatcccttctctagaaggtggactaggtctacaaattattttgcaaaaggtgcatccaatggtgaagctgctgcagcagcagcattggcagctgaagataacaatggggctggtggaactgctgacggaggaatggcagctacagcagcagccttgcaggctgcagcaggcgctgggaagttggtggacacaaatgctcctgtagatcaaggaacagaatcaaatacgctacatgatttcgatctgcctatctcgttggctgtgcttcagaagtttggagggtctcaaggaggccaagcaggatttatggctcgcaaacagaggatagaagcaactgttggatgtagcgttccggagaacgatggcagaagacatgcactaactttaagtgttagtgactacaagagaaggagaggactcctttgagatttactgcttttgttgtttagccaaatgaattgttgttactggggattcatgtactagctgtgaattaagagtacagttactgctatattaaaatatgttgagacttttcttgaatttatgcttctatagcaaagacctggttaaccaggggtcttttaagctttaatgagaaaagcactccttattatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0127N23.1" temp_strand="+" temp_description="C02SLm0127N23.1  AC232778.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0127N23 sequenced_by:kribb upload_account_name:korea">
        <position start="54619" stop="57937"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54919" g_stop="54957" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="39" r_length="39" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="54958" i_stop="55482" i_length="525">
            <donor d_prob="0.996" d_score="0.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="55483" g_stop="57638" g_length="2156"/>
          <reference_exon_boundary r_type="cDNA" r_start="40" r_stop="2195" r_length="2156" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0127N23.1" gen_strand="+" ref_id="SGN-U568786" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>2195</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0127N23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U568786" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54919" e_stop="54957"/>
          <exon e_start="55483" e_stop="57638"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATTTCTCTCCGGCGAACTCCTTATCGGCGAGATCAATTGTATGTATCTAATTCTTCTCTCCGGCAAACTTGTTTTCATTTCTGTTATTCCTTTGGCGATTATGTTAATGGTAAAATTTTTGCTTGATTGAACAGAAATTTGAAATTTTATAATGATTGAAAGAGTTGAATGGATCTGAATCAATGTTTACCTGATTATTTGCTCATTGGCATAGTTTAGTTCTGTTGTTCTATTTTATTCTGTATCCAGACTTAGGGTTTGTATTTGATGTTTTTGAGTTTTGACTGAGAGTTTTATGTTTCCTTGTTTGGTGGTTTTGTTGTTCTCCTTTCGTTTTATAGTCAAATTGATTGTTGTTATGTTTATAATTTGTCGAAATTGCTGATTTTTTTGAAGTTGTCGTTCAGCAAATTGTTTTTGAGTTTTGACTGAGAGTTTTATATTTCCTTGTTTGGTGGTTTCGTTGTTCTCCTTTCGGTTAATAGTCACATTGATTGTTGTTGTGTTTATAATTTGTCAAAATTGTTGATTTTTGCGTGGTTTTTGAATTTGTTGATATTCAGCAAGTGGCTGAGTGGAATAGAAGACCATGGAAGAAGAGTTAACTGATTTACTGTTGGAGGCTGCTGGTAGAACAAATACTGGTGGAAGGAATCGTCCACCTCATTCATCTAAAAGACATCACAAGAGTTCATATTCTGATGATGGAAGTGATTCCAGGGATGATGACTCTGATGATGGTCGTGGGTATTCAGGTCGAAAGCTTTCTGGTTCACAAGTTCCTCTCAAGAAGAGATTGGACCCTCAAGAAAGAGATGATGATCATAGCAGCCATGGAGAAGGCAATGATGGAGATGGTTATGGCAATGAGAGTGATGATGATTCTATTGGCAGTGATCTTTACAAGGACGATGATGACCGGCAAAAGCTTGCTCAGATGACTGAACTGGAAAGGGAAATGATATTGACTGATCGTGCAGCGAAGAAATCTGACAGGAGTCTGCATGACAAAATGATCAAGGATCGGGCCCAACCAAGGAAACAAAGCTCACCTCCTTCACATTCTCGTGGCATGCGCTCATCAACAAGAGCTTTGGATAGGGCAGCTGACAGAGATGATGCATTGAATGAGATACGAGCAAAACGAGCAAGACAGCAGCAGGATCCCGAGGGTCAATTCAAGCTGAGGGATGCAGCTAGAAAAGGTTCTGGAAGCAGGGGCTATTCACCTATCAAACGTAGAAGTTTTACAGCTGCATCTCTAGGTAGCAGTCCTACCAGGGGAGAAAGTGATTCACATAGTAATGAGGGAGATTCATCAGCTGATGATGGAATGGATGACAGTGATGATGACAAGTCATCACCGGAGTCACAGTTGCCAACATTTGAGGATATAAAAGAAATCTCTATTCGTCGTTCAAAACTGGCAAAATGGTTTATGGAGCCCTTCTTTGATGAGTTAATTGTGGGTTGCTTTGTAAGAGTTGGCATTGGGAGGTCAAGGTCTGGTCCTATCTATAGGCTCTGTGTGGTCCGCAATGTTGATGCTTCAGATCCTAATCGACAATACAAGCTAGAAAATAAAACCACATCCAAATTTCTAAATGTTGTTTGGGGCAATGAAAACTCTGCTGCTAGGTGGCAGATGGCTATGATTTCAGACTCTCCTCCTCTGAGGGATGAGTTTGATCAGTGGGTAAGGGAAGTAGAACGAAGTGGTGGTCGTATGCCTAGTAAGCAAGATGTGTTGGAAAAAAAAGAGGCCATACAGAAATCTAACACATTTGTTTACTCTGCTGACACTGTAAAGCAGATGTTGCAGCAGAAAAAATCTGCAACATGGAGGCCACTTAATGTTGCTGCTGAGAAGGATCGTTTGAGAAGGGATATGGAAGTGGCCAAAATGAAGAATGACGAAGCAGAAGTGGAGAGGATTAAGGCAAGACTGCAGGAACTGGAGGATAGCAGGAAGGTTCAAGAGAAAGATGACAAGGCCCGCAGGCTGGCTGAGATGAACCGGAAGAATAGGGTCGAGAATTTCAAAAATGCATCAGAACTCAGACCAGTGAATCAACTGTTGAAAGCTGGTGAGGCTGGGTATGATCCCTTCTCTAGAAGGTGGACTAGGTCTACAAATTATTTTGCAAAAGGTGCATCCAATGGTGAAGCTGCTGCAGCAGCAGCATTGGCAGCTGAAGATAACAATGGGGCTGGTGGAACTGCTGACGGAGGAATGGCAGCTACAGCAGCAGCCTTGCAGGCTGCAGCAGGCGCTGGGAAGTTGGTGGACACAAATGCTCCTGTAGATCAAGGAACAGAATCAAATACGCTACATGATTTCGATCTGCCTATCTCGTTGGCTGTGCTTCAGAAGTTTGGAGGGTCTCAAGGAGGCCAAGCAGGATTTATGGCTCGCAAACAGAGGATAGAAGCAACTGTTGGATGTAGCGTTCCGGAGAACGATGGCAGAAGACATGCACTAACTTTAAGTGTTAGTGACTACAAGAGAAGGAGAGGACTCCTTTGAGATTTACTGCTTTTGTTGTTTAGCCAAATGAATTGTTGTTACTGGGGATTCATGTACTAGCTGTGAATTAAGAGTACAGTTACTGCTATATTAAAATATGTTGAGACTTTTCTTGAATTTATGCTTCTATAGCAAAGACCTGGTTAACCAGGGGTCTTTTAAGCTTTAATGAGAAAAGCACTCCTTATTATT</genome_strand>
        <mrna_strand>CATTTCTCTCCGGCGAACTCCTTATCGGCGAGATCAATT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGTGGCTGAGTGGAATAGAAGACCATGGAAGAAGAGTTAACTGATTTACTGTTGGAGGCTGCTGGTAGAACAAATACTGGTGGAAGGAATCGTCCACCTCATTCATCTAAAAGACATCACAAGAGTTCATATTCTGATGATGGAAGTGATTCCAGGGATGATGACTCTGATGATGGTCGTGGGTATTCAGGTCGAAAGCTTTCTGGTTCACAAGTTCCTCTCAAGAAGAGATTGGACCCTCAAGAAAGAGATGATGATCATAGCAGCCATGGAGAAGGCAATGATGGAGATGGTTATGGCAATGAGAGTGATGATGATTCTATTGGCAGTGATCTTTACAAGGACGATGATGACCGGCAAAAGCTTGCTCAGATGACTGAACTGGAAAGGGAAATGATATTGACTGATCGTGCAGCGAAGAAATCTGACAGGAGTCTGCATGACAAAATGATCAAGGATCGGGCCCAACCAAGGAAACAAAGCTCACCTCCTTCACATTCTCGTGGCATGCGCTCATCAACAAGAGCTTTGGATAGGGCAGCTGACAGAGATGATGCATTGAATGAGATACGAGCAAAACGAGCAAGACAGCAGCAGGATCCCGAGGGTCAATTCAAGCTGAGGGATGCAGCTAGAAAAGGTTCTGGAAGCAGGGGCTATTCACCTATCAAACGTAGAAGTTTTACAGCTGCATCTCTAGGTAGCAGTCCTACCAGGGGAGAAAGTGATTCACATAGTAATGAGGGAGATTCATCAGCTGATGATGGAATGGATGACAGTGATGATGACAAGTCATCACCGGAGTCACAGTTGCCAACATTTGAGGATATAAAAGAAATCTCTATTCGTCGTTCAAAACTGGCAAAATGGTTTATGGAGCCCTTCTTTGATGAGTTAATTGTGGGTTGCTTTGTAAGAGTTGGCATTGGGAGGTCAAGGTCTGGTCCTATCTATAGGCTCTGTGTGGTCCGCAATGTTGATGCTTCAGATCCTAATCGACAATACAAGCTAGAAAATAAAACCACATCCAAATTTCTAAATGTTGTTTGGGGCAATGAAAACTCTGCTGCTAGGTGGCAGATGGCTATGATTTCAGACTCTCCTCCTCTGAGGGATGAGTTTGATCAGTGGGTAAGGGAAGTAGAACGAAGTGGTGGTCGTATGCCTAGTAAGCAAGATGTGTTGGAAAAAAAAGAGGCCATACAGAAATCTAACACATTTGTTTACTCTGCTGACACTGTAAAGCAGATGTTGCAGCAGAAAAAATCTGCAACATGGAGGCCACTTAATGTTGCTGCTGAGAAGGATCGTTTGAGAAGGGATATGGAAGTGGCCAAAATGAAGAATGACGAAGCAGAAGTGGAGAGGATTAAGGCAAGACTGCAGGAACTGGAGGATAGCAGGAAGGTTCAAGAGAAAGATGACAAGGCCCGCAGGCTGGCTGAGATGAACCGGAAGAATAGGGTCGAGAATTTCAAAAATGCATCAGAACTCAGACCAGTGAATCAACTGTTGAAAGCTGGTGAGGCTGGGTATGATCCCTTCTCTAGAAGGTGGACTAGGTCTACAAATTATTTTGCAAAAGGTGCATCCAATGGTGAAGCTGCTGCAGCAGCAGCATTGGCAGCTGAAGATAACAATGGGGCTGGTGGAACTGCTGACGGAGGAATGGCAGCTACAGCAGCAGCCTTGCAGGCTGCAGCAGGCGCTGGGAAGTTGGTGGACACAAATGCTCCTGTAGATCAAGGAACAGAATCAAATACGCTACATGATTTCGATCTGCCTATCTCGTTGGCTGTGCTTCAGAAGTTTGGAGGGTCTCAAGGAGGCCAAGCAGGATTTATGGCTCGCAAACAGAGGATAGAAGCAACTGTTGGATGTAGCGTTCCGGAGAACGATGGCAGAAGACATGCACTAACTTTAAGTGTTAGTGACTACAAGAGAAGGAGAGGACTCCTTTGAGATTTACTGCTTTTGTTGTTTAGCCAAATGAATTGTTGTTACTGGGGATTCATGTACTAGCTGTGAATTAAGAGTACAGTTACTGCTATATTAAAATATGTTGAGACTTTTCTTGAATTTATGCTTCTATAGCAAAGACCTGGTTAACCAGGGGTCTTTTAAGCTTTAATGAGAAAAGCACTCCTTATTATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U564723" ref_strand="+" ref_description="SGN-U564723 Tomato 200607#2 [7 ESTs aligned] (*GB) gi|157327962|emb|CAO16926.1| (e_value=8e-113) unnamed; (*ATH) AT1G61050.1 (e_value=2e-91)  Symbol: None | alpha 1,4-glycosyltransferase family protein / glycosyltransferase sugar-binding DXD motif-containing protein, low similarity to alpha-1,4-N-acetylglucosaminyltransferase, Homo sapiens (gi:5726306), Gb3 synthase, Rattus norvegicus (gi... ; (*SWP) sp|Q67BJ4|A4GAT_MOUSE (e_value=4e-18) Lactosylceramide 4-alpha-galactosyltransferase OS=Mus musculus GN=A4galt; ">
      <seq>gcaaaacagggctcaaaacccaagaacatttttggctactgaaaatttccaaaaagtactaaaaaaagacatcttttttcaattttactgcacttttttgccgcctccatcactgaaaaaatgttgttcaacttcctctactatcatcttcatcactttctcatagctgaaaattgcttcagaaaatgaaaaaggagacatttttaaatttccaagaaaagaccatggatggtgtcattaagaggaggtctttatatgcaattggttcttgttttctgctttttctcttagcttacaacagttccactgtgttctatgttcaagtccctgttccagggaactcttcgccggagatttcaagttttttaactgaaaatgtcgccagaaaatcaagaaagttggtttctttatctacttcagctaaacgttcatcctctgcgatatatgctgtaaaagaagaaaccccacttgtaaagccgaacacccggttgataatttcccggaaaaatccaaacatggtgggtttttcatatgattcagaggcttatcaacctagaagaaggaaaaagaagaagtctttggtgaaaggggacagaatcaatgtgttttcaatgagaatgaaggagttttttggttctaaagcatccaattcttcttgtaagtttcgatttttcatgacttggatttcttccattgaatcttttggtgaaagggaactgtttgctgtggagagtctgtttaaggcacacccaaatggctgtttggtcattatgtctacttcaatggattctccaagaggaatgcaagttttaaaccctttcttggagaaaggattaagggcaactgcaatatcacctgattttatgtacttgtttaaaaatactattgctcaagcctggattgataacttaatgaagggtaatatagacccaggggaagtttctttaggtcagaatctctcaaatttgttaagacttggtttactgtataagtttggtgggatttatttagatactgatgttatagtgtcgaagagttttgggaagctaaggaatgttattggggctcaaactattgatgttgaaacaagaaattggagtaggttaaataatgctgtaatgatttttgacaagaggcatcctttgttgtacaagtttattgaagaatttgcacttacatttgatgggaacaaatggggtcataatggtccttatttggtttcaagggttgtgtcaagggtaagtggaagagatggatacaatttcactgttttgcccccaatggctttttatccagttgattggaataggattggtagtctatttcttgggccgaggaacgagactcagtcgaaatggttgctcttgaaactccagcaaattcagagtggaagtttggcagtgcatctttggaacaagcaaagtagagaacttgaggttgaagaaggaagcataattcaacatataatgtcagattgttgtgttttctgcaattcttactcatcaaagttgtaagtatacaccacgtaaaatcagcgtcagcgtgttttattcttcattaattgttgtaggataatggaccacctaagctcattacataggttgtcttgaagaaattaggtggtacagaaataatgcaggatccatgtattctacttcattgtcgatgtgattgaacaaattatacaaagatagaaaagcagaattattgctaagttcccattgactgaaatgctattggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0127N23.1" temp_strand="+" temp_description="C02SLm0127N23.1  AC232778.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0127N23 sequenced_by:kribb upload_account_name:korea">
        <position start="61887" stop="64226"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62186" g_stop="63926" g_length="1741"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1741" r_length="1741" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0127N23.1" gen_strand="+" ref_id="SGN-U564723" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1741</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0127N23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U564723" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62186" e_stop="63926"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAAAACAGGGCTCAAAACCCAAGAACATTTTTGGCTACTGAAAATTTCCAAAAAGTACTAAAAAAAGACATCTTTTTTCAATTTTACTGCACTTTTTTGCCGCCTCCATCACTGAAAAAATGTTGTTCAACTTCCTCTACTATCATCTTCATCACTTTCTCATAGCTGAAAATTGCTTCAGAAAATGAAAAAGGAGACATTTTTAAATTTCCAAGAAAAGACCATGGATGGTGTCATTAAGAGGAGGTCTTTATATGCAATTGGTTCTTGTTTTCTGCTTTTTCTCTTAGCTTACAACAGTTCCACTGTGTTCTATGTTCAAGTCCCTGTTCCAGGGAACTCTTCGCCGGAGATTTCAAGTTTTTTAACTGAAAATGTCGCCAGAAAATCAAGAAAGTTGGTTTCTTTATCTACTTCAGCTAAACGTTCATCCTCTGCGATATATGCTGTAAAAGAAGAAACCCCACTTGTAAAGCCGAACACCCGGTTGATAATTTCCCGGAAAAATCCAAACATGGTGGGTTTTTCATATGATTCAGAGGCTTATCAACCTAGAAGAAGGAAAAAGAAGAAGTCTTTGGTGAAAGGGGACAGAATCAATGTGTTTTCAATGAGAATGAAGGAGTTTTTTGGTTCTAAAGCATCCAATTCTTCTTGTAAGTTTCGATTTTTCATGACTTGGATTTCTTCCATTGAATCTTTTGGTGAAAGGGAACTGTTTGCTGTGGAGAGTCTGTTTAAGGCACACCCAAATGGCTGTTTGGTCATTATGTCTACTTCAATGGATTCTCCAAGAGGAATGCAAGTTTTAAACCCTTTCTTGGAGAAAGGATTAAGGGCAACTGCAATATCACCTGATTTTATGTACTTGTTTAAAAATACTATTGCTCAAGCCTGGATTGATAACTTAATGAAGGGTAATATAGACCCAGGGGAAGTTTCTTTAGGTCAGAATCTCTCAAATTTGTTAAGACTTGGTTTACTGTATAAGTTTGGTGGGATTTATTTAGATACTGATGTTATAGTGTTGAAGAGTTTTGGGAAGCTAAGGAATGTTATTGGGGCTCAAACTATTGATGTTGAAACAAGAAATTGGAGTAGGTTAAATAATGCTGTAATGATTTTTGACAAGAGGCATCCTTTGTTGTACAAGTTTATTGAAGAATTTGCACTTACATTTGATGGGAACAAATGGGGTCATAATGGTCCTTATTTGGTTTCAAGGGTTGTGTCAAGGGTAAGTGGAAGAGATGGATACAATTTCACTGTTTTGCCCCCAATGGCTTTTTATCCAGTTGATTGGAATAGGATTGGTAGTCTATTTCTTGGGCCGAGGAACGAGACTCAGTCGAAATGGTTGCTCTTGAAACTCCAGCAAATTCAGAGTGGAAGTTTGGCAGTGCATCTTTGGAACAAGCAAAGTAGAGAACTTGAGGTTGAAGAAGGAAGCATAATTCAACATATAATGTCAGATTGTTGTGTTTTCTGCAATTCTTACTCATCAAAGTTGTAAGTATACACCACGTAAAATCAGCGTCAGCGTGTTTTATTCTTCATTAATTGTTGTAGGATAATGGACCACCTAAGCTCATTACATAGGTTGTCTTGAAGAAATTAGGTGGTACAGAAATAATGCAGGATCCATGTATTCTACTTCATTGTCGATGTGATTGAACAAATTATACAAAGATAGAAAAGCAGAATTATTGCTAAGTTCCCATTGACTGAAATGCTATTGGC</genome_strand>
        <mrna_strand>GCAAAACAGGGCTCAAAACCCAAGAACATTTTTGGCTACTGAAAATTTCCAAAAAGTACTAAAAAAAGACATCTTTTTTCAATTTTACTGCACTTTTTTGCCGCCTCCATCACTGAAAAAATGTTGTTCAACTTCCTCTACTATCATCTTCATCACTTTCTCATAGCTGAAAATTGCTTCAGAAAATGAAAAAGGAGACATTTTTAAATTTCCAAGAAAAGACCATGGATGGTGTCATTAAGAGGAGGTCTTTATATGCAATTGGTTCTTGTTTTCTGCTTTTTCTCTTAGCTTACAACAGTTCCACTGTGTTCTATGTTCAAGTCCCTGTTCCAGGGAACTCTTCGCCGGAGATTTCAAGTTTTTTAACTGAAAATGTCGCCAGAAAATCAAGAAAGTTGGTTTCTTTATCTACTTCAGCTAAACGTTCATCCTCTGCGATATATGCTGTAAAAGAAGAAACCCCACTTGTAAAGCCGAACACCCGGTTGATAATTTCCCGGAAAAATCCAAACATGGTGGGTTTTTCATATGATTCAGAGGCTTATCAACCTAGAAGAAGGAAAAAGAAGAAGTCTTTGGTGAAAGGGGACAGAATCAATGTGTTTTCAATGAGAATGAAGGAGTTTTTTGGTTCTAAAGCATCCAATTCTTCTTGTAAGTTTCGATTTTTCATGACTTGGATTTCTTCCATTGAATCTTTTGGTGAAAGGGAACTGTTTGCTGTGGAGAGTCTGTTTAAGGCACACCCAAATGGCTGTTTGGTCATTATGTCTACTTCAATGGATTCTCCAAGAGGAATGCAAGTTTTAAACCCTTTCTTGGAGAAAGGATTAAGGGCAACTGCAATATCACCTGATTTTATGTACTTGTTTAAAAATACTATTGCTCAAGCCTGGATTGATAACTTAATGAAGGGTAATATAGACCCAGGGGAAGTTTCTTTAGGTCAGAATCTCTCAAATTTGTTAAGACTTGGTTTACTGTATAAGTTTGGTGGGATTTATTTAGATACTGATGTTATAGTGTCGAAGAGTTTTGGGAAGCTAAGGAATGTTATTGGGGCTCAAACTATTGATGTTGAAACAAGAAATTGGAGTAGGTTAAATAATGCTGTAATGATTTTTGACAAGAGGCATCCTTTGTTGTACAAGTTTATTGAAGAATTTGCACTTACATTTGATGGGAACAAATGGGGTCATAATGGTCCTTATTTGGTTTCAAGGGTTGTGTCAAGGGTAAGTGGAAGAGATGGATACAATTTCACTGTTTTGCCCCCAATGGCTTTTTATCCAGTTGATTGGAATAGGATTGGTAGTCTATTTCTTGGGCCGAGGAACGAGACTCAGTCGAAATGGTTGCTCTTGAAACTCCAGCAAATTCAGAGTGGAAGTTTGGCAGTGCATCTTTGGAACAAGCAAAGTAGAGAACTTGAGGTTGAAGAAGGAAGCATAATTCAACATATAATGTCAGATTGTTGTGTTTTCTGCAATTCTTACTCATCAAAGTTGTAAGTATACACCACGTAAAATCAGCGTCAGCGTGTTTTATTCTTCATTAATTGTTGTAGGATAATGGACCACCTAAGCTCATTACATAGGTTGTCTTGAAGAAATTAGGTGGTACAGAAATAATGCAGGATCCATGTATTCTACTTCATTGTCGATGTGATTGAACAAATTATACAAAGATAGAAAAGCAGAATTATTGCTAAGTTCCCATTGACTGAAATGCTATTGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U598969" ref_strand="+" ref_description="SGN-U598969 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>cagggtgctacctgtatgataataggtcagtaagaaagtttctgctggaattattctaagaattattcataaactaccgtactaacactgataattcataattctatctggttagttccatgtgaatgtaatttgtgcagaaaagtcatggagatgttgtgatccaaccaccttcagtgaaatctccttaccttgtgcacaaatgttttgttgacctgaaacaggattaacatgaagaatacttggaaatttctttcatcagtcatcagtcctcatatctgttaattaaagtaaaatgacaaccagacattttgactctgcgctccttcaccgctcctcaatctgttaatttttgtggcactgattacaagctttcattatctacattacttcttataactgaatttttatcctgtgatgatcttcatattgtcctttctaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0127N23.1" temp_strand="+" temp_description="C02SLm0127N23.1  AC232778.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0127N23 sequenced_by:kribb upload_account_name:korea">
        <position start="63932" stop="64974"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64232" g_stop="64674" g_length="443"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="443" r_length="443" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0127N23.1" gen_strand="+" ref_id="SGN-U598969" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>443</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0127N23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U598969" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64232" e_stop="64674"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGGGTGCTACCTGTATGATAATAGGTCAGTAAGAAAGTTTCTGCTGGAATTATTCTAAGAATTATTCATAAACTACCGTACTAACACTGATAATTCATAATTCTATCTGGTTAGTTCCATGTGAATGTAATTTGTGCAGAAAAGTCATGGAGATGTTGTGATCCAACCACCTTCAGTGAAATCTCCTTACCTTGTGCACAAATGTTTTGTTGACCTGAAACAGGATTAACATGAAGAATACTTGGAAATTTCTTTCATCAGTCATCAGTCCTCATATCTGTTAATTAAAGTAAAATGACAACCAGACATTTTGACTCTGCGCTCCTTCACCGCTCCTCAATCTGTTAATTTTTGTGGCACTGATTACAAGCTTTCATTATCTACATTACTTCTTATAACTGAATTTTTATCCTGTGATGATCTTCATATTGTCCTTTCTAGA</genome_strand>
        <mrna_strand>CAGGGTGCTACCTGTATGATAATAGGTCAGTAAGAAAGTTTCTGCTGGAATTATTCTAAGAATTATTCATAAACTACCGTACTAACACTGATAATTCATAATTCTATCTGGTTAGTTCCATGTGAATGTAATTTGTGCAGAAAAGTCATGGAGATGTTGTGATCCAACCACCTTCAGTGAAATCTCCTTACCTTGTGCACAAATGTTTTGTTGACCTGAAACAGGATTAACATGAAGAATACTTGGAAATTTCTTTCATCAGTCATCAGTCCTCATATCTGTTAATTAAAGTAAAATGACAACCAGACATTTTGACTCTGCGCTCCTTCACCGCTCCTCAATCTGTTAATTTTTGTGGCACTGATTACAAGCTTTCATTATCTACATTACTTCTTATAACTGAATTTTTATCCTGTGATGATCTTCATATTGTCCTTTCTAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U585902" ref_strand="+" ref_description="SGN-U585902 Tomato 200607#2 [3 ESTs aligned] ">
      <seq>gtgaactgtggagaatcaattgcattatacaataacataaagtgataaacaaaacaaaagctttatatcttgatgacattgaaattctatatctagaaacttagaagcaatacatagattttgttcttcatccttgtaataacaacagatcagtgatggtgaatatatgtatataggttccacttgatattcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0127N23.1" temp_strand="-" temp_description="C02SLm0127N23.1  AC232778.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0127N23 sequenced_by:kribb upload_account_name:korea">
        <position start="66233" stop="65441"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65933" g_stop="65741" g_length="193"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="193" r_length="193" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0127N23.1" gen_strand="-" ref_id="SGN-U585902" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>193</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0127N23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U585902" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65933" e_stop="65741"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGAACTGTGGAGAATCAATTGCATTATACAATAACATAAAGTGATAAACAAAACAAAAGCTTTATATCTTGATGACATTGAAATTCTATATCTAGAAACTTAGAAGCAATACATAGATTTTGTTCTTCATCCTTGTAATAACAACAGATCAGTGATGGTGAATATATGTATATAGGTTCCACTTGATATTCC</genome_strand>
        <mrna_strand>GTGAACTGTGGAGAATCAATTGCATTATACAATAACATAAAGTGATAAACAAAACAAAAGCTTTATATCTTGATGACATTGAAATTCTATATCTAGAAACTTAGAAGCAATACATAGATTTTGTTCTTCATCCTTGTAATAACAACAGATCAGTGATGGTGAATATATGTATATAGGTTCCACTTGATATTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U577660" ref_strand="+" ref_description="SGN-U577660 Tomato 200607#2 [16 ESTs aligned] (*GB) gi|124359559|gb|ABN05971.1| (e_value=0) PSP,; (*ATH) AT4G21660.1 (e_value=0)  Symbol: None | proline-rich spliceosome-associated (PSP) family protein, similar to SP:Q13435 Splicing factor 3B subunit 2 (Spliceosome associated protein 145) (SAP 145) (SF3b150) (Pre-mRNA splicing factor SF3b 145 kDa subunit) {Homo sapiens}; conta... ; (*SWP) sp|Q13435|SF3B2_HUMAN (e_value=6e-118) Splicing factor 3B subunit 2 OS=Homo sapiens GN=SF3B2; ">
      <seq>agcccaacgatcacttgcaacggatctgatattttctccttcactcttcttcatctttcgactccctccatttttctttctcttcaccttctcctataactccaccggaaaaaaaatatctcaactgaatatctacattaatctcaaacggccggagtagtatgccggttgaagtagcaaacgtagtgacagaagccattggtaatccaaaaggcgatttgagacctcaaaaccctaacgccgcctctaagaagtcgaaggaaagcgaccgacgccgtaggcggaggaagcagaagaagaacaaggcggcgtctaaggttgcaaatggagaagacagtgataacgctgcgcaagacgcgaacggcggcgctgaggatagttccaaggaaaattccgatcctcagaagtctttggttcaagttgaagtagaatatgtaccagagaaggccgaattagatggtgagttcgatgaggaattcaggaaggtttttgagaaattcactttcacggatgctactggttctgaggagaatgataaaaaggatgaaactgctgctgatggagcctcaaagaaaaaggcggattctgattctgaggaggaagaagaggatgcacagcaaaaggagaagggagtctcgaacaaaaagaaaaaacttcagcgtaggatgaaaattgcagaactgaaacaaatctctatgaagcctgatgttgttgaggtatgggatgccactgcagcagaccctaagctcctggtatttctgaaatcttaccggaatactgttcctgttccaagacactggtgtcagaaacggaaatttttgcaggggaagcgtgggattgagaaacagccatttcaacttcctgactttatagctgcgacaggaattgagaaaattagacaagcttatattgaaaaggaggacagtaagaagcttaaacaaaagcaccgggaaaggatgcagccaaaaatggggaagatggatatcgattatcaggttctacatgacgccttttttaagtatcaaactaaaccaaagttgacatcccttggtgatctgtattatgaaggaaaagagtttgaggtcaagttgagggaaatgaaacctggaactttgtcttcatgaactgaaagaggcccttggtatgcctgaaggtgctcctcctccatggctcatcaatatgcagagatatggtcctccaccctcttatcctcagctgaagattcctggactgaatgctcctattccacatggagccaagttcggttatcagccgggaggttggggtaaaccacctgttgatgaatatgggcgccctttatacggagatgtctttggtgtattgcaacaagatcagcctaattatgaggatgaacctgttgataagactaaacattggggtgacttggaggaagaggaagaagaggaggaagaggaggaagaagaagagatggaggaagaggagatggaggacggtattcagtcagtggacagtctttcaagtactcctactggagttgagactcctgatgttattgaccttcgcaagcagcagaggaaggagcccgagaagcccctctaccaggtgcttgaagaaaaagaagaaaaggtagctcctggtactcttcttggaacaagccatacgtatgtgatcaacactggcgctcaagacaaggctggtgccaaaagggttgatctgctcaaaggtcagaagtcggatagagttgatgtcacattggcacctgaagagttggaacttatggacaatgttttaccagccaaatacgaggaagctagagaggaagagaagctccgtagccagcgtgaggatttcagtgacatggtagcagagaatgagaagaagaggaagcgtaaaatgcaggagaaggatggcaagtcgaagaagaaggatttcaagttttgaggttctgatatattgttccatctagtttagggctgcagtacatccagcttagggtaatagcattagtaggtctccatatgcactgcgataaatctcgtatgctgtgatgagagtgttttcccatgcgttgaagcggggagagttggtgtatgataatctatcctatgaaatgtgcttagtttgtacctcttgtttcatttctacatacgttgagctgtatgtgaaaatagaaaatctcttgccctaatttagatgtatgctcgacttggttataattttaaaaaaaatgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0127N23.1" temp_strand="+" temp_description="C02SLm0127N23.1  AC232778.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0127N23 sequenced_by:kribb upload_account_name:korea">
        <position start="69255" stop="80156"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69555" g_stop="69961" g_length="407"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="407" r_length="407" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69962" i_stop="73298" i_length="3337">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="73299" g_stop="73418" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="408" r_stop="527" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="73419" i_stop="73511" i_length="93">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="73512" g_stop="73637" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="528" r_stop="653" r_length="126" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="73638" i_stop="73736" i_length="99">
            <donor d_prob="0.956" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="73737" g_stop="73799" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="654" r_stop="716" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="73800" i_stop="74576" i_length="777">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="74577" g_stop="74684" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="717" r_stop="824" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="74685" i_stop="75279" i_length="595">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="75280" g_stop="75357" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="825" r_stop="902" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="75358" i_stop="76045" i_length="688">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="76046" g_stop="76138" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="903" r_stop="995" r_length="93" r_score="0.989"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="76139" i_stop="76249" i_length="111">
            <donor d_prob="0.974" d_score="0.98"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="76250" g_stop="76336" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="996" r_stop="1082" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="76337" i_stop="76881" i_length="545">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="76882" g_stop="76983" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="1083" r_stop="1185" r_length="103" r_score="0.980"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="76984" i_stop="77107" i_length="124">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="77108" g_stop="77227" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="1186" r_stop="1305" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="77228" i_stop="77339" i_length="112">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.931" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="77340" g_stop="77402" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="1306" r_stop="1368" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="77403" i_stop="78074" i_length="672">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="78075" g_stop="78208" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="1369" r_stop="1502" r_length="134" r_score="0.993"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="78209" i_stop="78364" i_length="156">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="78365" g_stop="78446" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="1503" r_stop="1584" r_length="82" r_score="0.988"/>
        </exon>
        <intron i_serial="13">
          <gDNA_intron_boundary i_start="78447" i_stop="78534" i_length="88">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="14">
          <gDNA_exon_boundary g_start="78535" g_stop="78593" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="1585" r_stop="1643" r_length="59" r_score="1.000"/>
        </exon>
        <intron i_serial="14">
          <gDNA_intron_boundary i_start="78594" i_stop="78697" i_length="104">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="15">
          <gDNA_exon_boundary g_start="78698" g_stop="78743" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="1644" r_stop="1689" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="15">
          <gDNA_intron_boundary i_start="78744" i_stop="79128" i_length="385">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="16">
          <gDNA_exon_boundary g_start="79129" g_stop="79220" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="1690" r_stop="1781" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="16">
          <gDNA_intron_boundary i_start="79221" i_stop="79308" i_length="88">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="17">
          <gDNA_exon_boundary g_start="79309" g_stop="79378" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="1782" r_stop="1851" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="17">
          <gDNA_intron_boundary i_start="79379" i_stop="79493" i_length="115">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="18">
          <gDNA_exon_boundary g_start="79494" g_stop="79845" g_length="352"/>
          <reference_exon_boundary r_type="cDNA" r_start="1852" r_stop="2203" r_length="352" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0127N23.1" gen_strand="+" ref_id="SGN-U577660" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>2202</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0127N23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U577660" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69555" e_stop="69961"/>
          <exon e_start="73299" e_stop="73418"/>
          <exon e_start="73512" e_stop="73637"/>
          <exon e_start="73737" e_stop="73799"/>
          <exon e_start="74577" e_stop="74684"/>
          <exon e_start="75280" e_stop="75357"/>
          <exon e_start="76046" e_stop="76138"/>
          <exon e_start="76250" e_stop="76336"/>
          <exon e_start="76882" e_stop="76983"/>
          <exon e_start="77108" e_stop="77227"/>
          <exon e_start="77340" e_stop="77402"/>
          <exon e_start="78075" e_stop="78208"/>
          <exon e_start="78365" e_stop="78446"/>
          <exon e_start="78535" e_stop="78593"/>
          <exon e_start="78698" e_stop="78743"/>
          <exon e_start="79129" e_stop="79220"/>
          <exon e_start="79309" e_stop="79378"/>
          <exon e_start="79494" e_stop="79845"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCCCAACGATCACTTGCAACGGATCTGATATTTTCTCCTTCACTCTTCTTCATCTTTCGACTCCCTCCATTTTTCTTTCTCTTCACCTTCTCCTATAACTCCACCGGAAAAAAAATATCTCAACTGAATATCTACATTAATCTCAAACGGCCGGAGTAGTATGCCGGTTGAAGTAGCAAACGTAGTGACAGAAGCCATTGGTAATCCAAAAGGCGATTTGAGACCTCAAAACCCTAACGCCGCCTCTAAGAAGTCGAAGGAAAGCGACCGACGCCGTAGGCGGAGGAAGCAGAAGAAGAACAAGGCGGCGTCTAAGGTTGCAAATGGAGAAGACAGTGATAACGCTGCGCAAGACGCGAACGGCGGCGCTGAGGATAGTTCCAAGGAAAATTCCGATCCTCAGAAGGTACTGTCTGCTTATCCTTAATGTTAGGTATACGGTGTTCTGGATTTTTGGTGAATATGGATTGCTTAGTGTTAGTTGATGAGTTAGTTTGTTGTGGAAATAGATCTTCTGTGTATGAATGAGTTCAGGTACTTGTGTTGTAGCTTGATATTACTAAGGTTTTGTGTTGAGGAACTTCTTAGCTTCAAATGTTGAGACTCTTTTCCTTTAAAAAGATCGAGCTGAGTCAGTTGTAGTTTTCTAGTGATTGTGGTAGTTTCAAAACGGTAGTCTAAGAAGAATTTCTTGTTATGTTTTGTGATTTGGGAAACAAGATAAGAGGAGGAGGAGGCAACATTGGATATAGTATGAAATTACTAATTTGTATCAGGAAATGAATTTCCTCCATTGGGAATTCTGAGAATGAAAATAATGAGAGCCCGTCTGACTACATGTGTGATGTTTGTTGTTAATGGGTATCATATTGAATTTGTTCATAATTGTAGGGCAAGTAAACTATGTCACCATTGTAGGATATACTAGAATAAGTTCATGGAGATCTCTTTTACCATTTTGGTCCCAATCTAAGATGTTCAGGATGTAGCGTGTGTATCATGATGACATGCGTCAAGTCTGATGGGGCTTCATGTAAAGCGTGTGTTTCACTGATCATGTGTGCAAATGAACCTAAAAGAATACATTGAAAAATCTGTACACACTCCGACATAGTGCAAGGAGAAATACATTTGTCAGGAACATGAACATTGTTGTGGAGAGCAGCGTCCATATTGGCAACTAAGAATGGACTCCTTTTTATTTTCTTATATATTTGCTTTCACTGCAAGTATATGATTAAGTTTATGATGCTCGGACCCAGCACTTTTGCCTCTGTATCGGGGTCTACCCACACTGACACGGGTTATTGTGTGGAATTCCTGTCAGATCCAGTCAATAGTGATTGGATTTTTTGACCAGAATCCACGGACAAATTAGAGTATTTTTGAGATTTTGATTTCTCAAGATGACAAAGAGTAGAGATTTGAAGACGTGGAATGTCATACCTTCAATATTATCTCTGTTTCCGATTTCTTCAATATTTTTTTCTTCATATAGCAGGCCAAAATTGAAGCAAACAGAGAGTTAAACCGCTAGGAAGGAGAGAGTTTGAAGAAATCGATGACTGAGTCAACTCATTGGGGAAAACAACTGAGTTCTTCTTTTTTTTTATTTAAGGTCTGAAACGATTGAGTTTCATTCTCTTTTGGGGTTTGAAACTACTGAGTTATCTGTAGACGATATTGGATTTCACGGTGATACATCTTCGATGAAGAAAAAAGAAGCTATAGAGAAGAAGAAAGAGGAAAATTATGGGACATAGAATGCATCTCAATATGGTGGATACCAACAAGGAGGAACTCTTTTGTTTCTGGGCCTTCGTCACAATCCACTTTCAGCTACATAGAACATGGGCCATGACAGATGGCCCATTTCACAATCTTCATCTAGAATAAATATTTGCCCTCTAGAAGTAGGAACTAGACTATTTTTCACTATGTTTGCTACAAATTTAGTGATAGATCTTTTTCCAGCCATATTTTAGTGGTATAGAAGTCCTAATATTAATAACCGTGCAAGGGAAAAATGAACCAACTAAAAATGGTGATAACATTCTTTTTTTCTTTGTAGTTTTCCTTTTTTATCCTCTTACTAATTAATGAGTCTTTAATAGTAATATTAAGGAATTAATGAAATGTCAGTATATTTGATTAGGACTAAGAATTAAGTACTTCCACAAAACCTCTCTCATAATCTACACATAATTATGTAGATACACTTTTAGAATTTTGAATTTATCTTTTGCCAAATCCGCACTCACGAATCTTAAAATTTTGATTATGCCGAATCTGATCTCTAGATCAGTACCCGAATACGAAACCCCACACCTGAGTCTGAGCAACATAGGATTAAGTACAGACAATAATTGTTGGAACAAAGGAAGCTGAATAACTTCAATAAATGAAATATTGGATTCTGAAACATGTAAAGCAAGTGCAAATGATTTCAGATGTTGACTACATGCTTGTGCGGAGATCCAGCTTAAGTTTCTAATTCGGACTTGGAATTAAATTCTTATGCTAAATTTCTAATTTTATATTTTTAATCAATAAGAAGTTCATTACTTGATATAAAATCAGTAAGAAGTTCATTATATTATTCCTTTATTATTTTATAGTACCGTTGTTTTCAAGATAGTGCCTATGAGAGATAAGGTGTATGTCGTGCCTGCACAGCAATGTGTAAGTGAGGTCAAGTTTTGCTCCTAAATTTTTTATTTAACTTGATCGAGCATTTGACAACATTTTATGGTAATGATAATAGTTGGCAACCTTAACCTTTTATCTTTCCTTGGTAAGTAATATAGGTGGTCCCCTTTTCTTTTTAAATAATAAGTAACATAGGTGGATACCTTTTACTATATATGTATCACTATATGTTTGATGAAGTTATTTCTACAATACAAAAATTGGACAACCTCTTTTCTTAAAAGAAGTTAGGAATGTGAAAGATGGAAGAATTTATATGCCATTGCATTAACCTTTGTGGGTCGAATGCTGGCTAAACACCATTATTTTTCACCCACAAAAAAAAGTGATGTGGAGAAGACCCTATAAAAAAATTGACATTAGTGTGTGTCTTTTCCCTGCTCCCTTTTGTTATTTTTCGGGACTGCTGGATTAAGAATATACACCTTTGTGGACTATTAGAGTCTCTTGACATAATTATGTCCTTTCTGTTTAGCTGTAAAGAGTGATGTGATGGGACTGATTTACGTTTTGCAAGTGATATGAGCAAAATCCTTTGTTCTTTAGAAGTTGCAACTCACAAGTGAAGTGGTACTTGTTATAACCATTTGTTTTTAGCAGTAAGCATTCATATACTATAATATACTGAAGATTATTGGACTTTCTCATTTGTATGTTTTAATGTGTACAAAATAGTTAGCGTTTGGTGAATTTCTGACTTCAGTGGGTAATTATGAAGTTCTGTTGATCTCTGTGTGCAAAATAGTTGGCGCTTGGTGAATTGCTTGTTTCATTGCCTCCTTTTTGATGCGATCTATTGAACCTTCTTGAATTTTTTATTGCTAAATACAGAAAAAAGTGTGCTATTTTATTCAAAATCATATGTTTTTGACCTTTGAAGCAACGCTGGATGTAAACTACTCTGGAAGCAGCAAAAAGTTGGTCCCAATCGCCTAAAAAAGAATACTCTTTTGTTGTATTATGTTTTCTTTTTACCTTCAATTCATATTTACATTAAAATATATTTGATCTTGATAACTCCCCATTTTTTACAGTCTTTGGTTCAAGTTGAAGTAGAATATGTACCAGAGAAGGCCGAATTAGATGGTGAGTTCGATGAGGAATTCAGGAAGGTTTTTGAGAAATTCACTTTCACGGATGCTACTGGTTCTGAGGTACATAGAGCTTTGTTCACTTGCATGGATTTTCTGTGGTTATAATTTCTGCTGAAGCCAATTTGACAAAATCTTTCAATTGAAATTCTTCAGGAGAATGATAAAAAGGATGAAACTGCTGCTGATGGAGCCTCAAAGAAAAAGGCGGATTCTGATTCTGAGGAGGAAGAAGAGGATGCACAGCAAAAGGAGAAGGGAGTCTCGAACAAAAAGAAAAAAGTTAGATTTTTTAGCATCCTTTCTGTTGATACTTCTTTTTTTACTTCTAAGTTGTTATCCTTCAGTTAGGTCTCAGTCTGAACTGTTTCTTCATTTCAGCTTCAGCGTAGGATGAAAATTGCAGAACTGAAACAAATCTCTATGAAGCCTGATGTTGTTGAGGTATGGCAGGCATTTGTTTCATTGTTATTTTCCTGACATACATACTCTATGCAGTTCTGTGTACTGTTAGCGGTTACCCTGTGTATTTATCTTGTCATGAGCCAAATGAGTTATCAACTATTATCCTTTTAGAAATGTATTAACATTCTGATTTTCCATCTGTCATTTGTGTTCTTTCTTTTTTGATTATGCCCATCCCTAGCTCTGTAAATTTAGTTTGCTTGCCTTTCTAAATCTGTTTTATGGTTGTGCCAATTGCTATGATGTGAATCATTTATTATGACTTTATGAGGGTTCTGATATTATTTTTCTTTGAAGATATGGTATTATCACCCTTCAATTGGAAGGTATTTGCATCTTTAATATTGGCTAGTATGGGAGATATGTTTTCTGTGTCTTCTGTGCTGTCTTCTTTCCAGCCCACTCGTGCAGAAATTTGACGTGCCAGGTTATGCAGAAAATTTTTTCCAAGTGAAGATCAGTATGACATGGTGTTTGATAAAATTTTATATATTGACAAACCATTGTTGCTTTCTTCACTGCTTGTCATCTTCTGAACCATCTTTTTTTTTCCGCTGTACTGGAAGTAAATTTTGCATGATAGTCATGCAGGTTTTACTCAACTCTTTTGATAGCATTACAATGTTGGCTTGGTAAAATGTCTGTCTGGTTTCTGATTTATATGGGATAACTCCTAAATTGATGTTTAGACTCTGGATTTTATCACTTAAAGTGTAGCCCACTTCTCCTTGGTACTGATTATGCATATATATCTAGGTATGGGATGCCACTGCAGCAGACCCTAAGCTCCTGGTATTTCTGAAATCTTACCGGAATACTGTTCCTGTTCCAAGACACTGGTGTCAGAAACGGAAATTTTTGCAGGTTAGTCATCATTATTGATACATGTATTGTAGGTTAACAAAGTGAAGAATAATGTGTACCTCTTGCACTGCATGTAACAATTAGTAATAGTAGAATTGTTTGATAGGAGAAAAAGGTTTGGTTTATGAAGGGGCTCATAGAAGAAAAATGAGGTTTGTCTTATATGTATATATATGTGCTTCTTGCAGGCGAGCGGCTGTGACACTGGTGGAGCCTAAAACATGTAGGTGTTTGACAAGGAGAATCCTTGTATGATGTCTATGTTTCTGTGTATTTATGTCTTTTTATTATTTAGTGGGTTGGGATTCATGCATTTGTCATTTTTTGGTGTGCATGTTGCTGGGGTTTCACTTTCTCTTAGTTGTAAAAATGGTTGGCTGCTGTTGAGCACCTTAAAGATTGAGTGACTAATATTTTGCTCTTATCCAGTTCTATAATTTTAGTTATTTTTGCAATATTCTGTCCAAAGTTGGATTTTCTGATGTGAAGGGATCTGCCAGTCAGTCGTATAAGCCACACAGAGTATTTGTATAGAGTTTTCTTAGTGTCTTTTTCTTAATTTGCTTTTATCTAACTGACTGATTTTGTTTTTCAGGGGAAGCGTGGGATTGAGAAACAGCCATTTCAACTTCCTGACTTTATAGCTGCGACAGGAATTGAGAAAATTAGACAAGTATGATTTTCTGTCCAATTTTATCTTTCTTTGGTTGACGGCTTTGTTAAGTAGGAATGTGTTGCATGAATTATTGTAGATACACTACTAATAAATGAAGGTTTTTCATTCTGACTATGGAAAGATGAAAATATGTTGGTGGTACTCTATCAAAGTTGTATCAACGTAATGATCATTATTAAAATCAAGCTTAGATTTCAAGGTGAACTACTTGATGCTTTCACATTCTACGTTATCTTGAGATGAGCCTGATAATCCTATTCTTTTAATAGAAACACCCTACGGCATTTTATTTTATTTCATGAAAAGATAAATTAATGTGTAACAAGAAGGTACAAGAAGATTACAACTGAAGGTCTTAGTCCACCTACATCTTGAAATACTATAAAAGATCCATCAGTGAGGCAATATCAATATTTAGTTATAATATTCTAACATCTAAGAGGCTATCAAATCATGATTTCACTGGACTTACATAGGAAATGCACTCTTTCTGTCTGTTGACCCTTTGGTATTCTTCTAATTGTAGAAAAGACAGATCCTAAAACTATTTACCTGGTATAAGATGATGATTTTACAAATCTGTTGTGTTAAAACTTGTTGAAATGTGATACCTTTTTGTGAGCTTATGTAGTATGTCTAGTTTCCTTGCTGATGTTTGGACATCTTATTTGTTCTTCTGGTGCAGGCTTATATTGAAAAGGAGGACAGTAAGAAGCTTAAACAAAAGCAGCGGGAAAGGATGCAGCCAAAAATGGGGAAGATGGATATCGATTATCAGGTTTAATACGAGCTTTTTTCTCAATGATGCAGACCTTTCAAATACATATAGACTATAGTTAACTGCTTATGTACTTTTCTAAGGCTTACTGCTCTGGTTTATTCTTCACAGGTTCTACATGACGCCTTTTTTAAGTATCAAACTAAACCAAAGTTGACATCCCTTGGTGATCTGTATTATGAAGGAAAAGAGTTTGAGGTAAAAAATAGCCATAAATATTGTTCATCAAACTCATGTTCTTTAAATCTTTTTAATGATGGTGGTGTCCGTGTGAGCATTGTGCGCCCTTAGAGTACTACACCAGGTATCTGCTACTTCGCAGAACATCTGCCCCAAGACTTAGATAGAGTGGAAGGAAACACTTAGTATATGTTTGCTTCCGCTGGGATTTGAGCCTGAGACTCCATATTGTGCTCCAACTTCATTGACCACTAGGCCACAACCTTGGGTGCCAAACACATGCTCTTTCTTCTCTAGCTTTCATGCTTTTTTTTTTTTGAAAAAAAAATTGTTCTCAACCTTGCTGATATTTCACCGAGCCTGGGGAAAAATAATGGAAGTCTTTTTGCTGTTGTGATCTTATAAGACCAAACTGGGTAGGTTTGGATAGGACTATCCAACTTGGAGATGTGTTCCCGTTGTGTTAATTCTTGGTTGTTGTTAGGCTTTACAACTGTTAATACTTTCGATATCCTATCCTCTGCATTTTTGTCTGTTAACCATCATTTTATTTTAATGTGAAGGTCAAGTTGAGGGAAATGAAACCTGGAACTTTGTC-TCATGAACTGAAAGAGGCCCTTGGTATGCCTGAAGGTGCTCCTCCTCCATGGCTCATCAATATGCAGGTATGATAACTTAAAACTACTTGTTCTTTTACTGGATGTATCGTTTGTTACCCCAGGTTCTCGTTTGATTACTATGTTGAGTTCGTTCCTAATGTGATTTTCCATACCTCCATTTTCTGTGCAGAGATATGGTCCTCCACCCTCTTATCCTCAGCTGAAGATTCCTGGACTGAATGCTCCTATTCCACATGGAGCCAAGTTCGGTTATCAGCCGGGAGGTTGGGGTAAACCACCTGTTGATGAAGTAGGTTTTACAACCTTTCAGTATATTTGTTTTATATTCTTCCTTTCAGATTGGTCAGCTTTAAGAGTTTCTTATTTTAATTTTAACCTTTGCCCTTCTTTCTTTGACATAGTATGGGCGCCCTTTATACGGAGATGTCTTTGGTGTATTGCAACAAGATCAGCCTAATTATGAGGTACATTGTGCTCTTTTTTGTTTGGTATGTTCTTGGAGTGTAAGTTTAATGAGTTAGGATTTTATGTTAGGTAGTTGTCATATTATCTAAGGGATAATGCACAAGTACCTCCTTAACCTATGCCCGAAATCCCAGAGACACACTTATACTATACTAAGGTCCTATTACCCCCTGAACTTATTTTATAAATAATTTTCTACCCCTTTTTAGCCTACGTGGCACTGGTTTGAAAAAAAAGTCAACCAGCGTTGGGCCCACAAGATAGTGCCACGTAGGCCGAAAAGGGGTAAAAAATTATTAATAAAATAAGTTCAGGGGGGTAATAGGACCTTAGTATAGTATAAGTGTGTCTCTGAGATTTCGAGCATAGGTTGAGGGGGTACTTGGACATCATCCCTATTATCTAATGATAAGGTAAAATAATGGGAACTGCACCATATTCAATATGGTAAATAGAGAATACTTAAATTGACTACTTGATTTTGGTAAACATGCAATGGTATAGACCTACTGATGATGTTTCTATATTGTTAGTAAATTCTCTATCTTAAAAAAATATTGTTAATACATTCATAAATGTGGCCTTGTAGTTGGTGCACAAAAGCTTGGGCCTCGCCTTTTTGCTCGGTGTATTACGTAAATTAATATCATGCTGCTCATCTATATGTGTAGGATGAACCTGTTGATAAGACTAAACATTGGGGTGACTTGGAGGAAGAGGAAGAAGAGGAGGAAGAGGAGGAAGAAGAAGAGTTGGAGGAAGAGGAGATGGAGGACGGTATTCAGTCAGTGGACAGTCTTTCAAGGTACTGACTTGATCAATTCCTTTAATGATCAAATATCTATCAGAAATCTTGTAGTAGCTTGAAGTCTTCCTCATTTTTGGTTCCCTTTCACTAATTTATTCGTTCTTGCTGAGATCCATTTTAGCTTTGTTCTCAATGTATCTCTCTATGGTGTAGTACTCCTACTGGAGTTGAGACTCCTGATGTTATTGACCTTCGCAAGCAGCAGAGGAAGGAGCCCGAGAAGCCCCTCTATCAGGTAATTAGGCCAACTTTTTGTCTCCCAGTTTCTATATTCTCTCTGCTTTCTTTTCCGTCCTTGTAAATTACATCTCTTTTCTGTATAGGTGCTTGAAGAAAAAGAAGAAAAGGTAGCTCCTGGTACTCTTCTTGGAACAAGCCATACGTAAGTAATCTATCTATTTATCTATACTCACATATATGTAGCTTTGGACACTAGCATTTATCCTTTCCTCTACTGTGCAATTGATTTATGCTCTCATTCTGCAGGTATGTGATCAACACTGGCGCTCAAGACAAGGCTGGTGCCAAAAGGGTAAGGCTATCTTTTTCTTTGTCATGTGTTCAAATGCAGGTTTACTTTCTCAAGCAGAAATCTTCATAGAGTGACATGGTCTCAGTAGCGTCAGCCCCTATTGGTGGGGCTATAGCTGCTGTGGACAAGTCACATATGTTGAATTTTTCAGCTTATTCTTGTTAGTTGGTCACTGATGGAAAAGACAGTTCAAGATAAAGAGGCAAAGTACTTCAATTTCATTTGTCACTTTCTGACATATCTTGTTACATTTTGACTAATTATTTGATACTTCACTTTTATTTGCGTCACTTTCTTATATTAATGCTTACAGTTGGTTTTTCTTCTAGAAGAGGCACTAGATTAGAATTTGCGGCTAATTAATTGCTTGGAATGTCCACTTTAGGTTGATCTGCTCAAAGGTCAGAAGTCGGATAGAGTTGATGTCACATTGGCACCTGAAGAGTTGGAACTTATGGACAATGTTTTACCAGCCAAGTAATTAATGATTCTTTTAACATTTTATGATTAGAAGCTCCTACATCTTAGTTTAAATGTTCCTAAAACCTTTTTGTGCTTTTTATAGATACGAGGAAGCTAGAGAGGAAGAGAAGCTCCGTAGCCAGCGTGAGGATTTCAGTGACATGGTAGCAGAGGTTTGTGGTTACATCATCTCTTCTTCATTCTTTCTCTCCATATTACCTTACATTTCATTGGATTGTTGGTTTAGAAAGAGTGACTATCAGTTCTGATGAGATAAAATTACTGCAGAATGAGAAGAAGAGGAAGCGTAAAATGCAGGAGAAGGATGGCAAGTCGAAGAAGAAGGATTTCAAGTTTTGAGGTTCTGATATATTGTTCCATCTAGTTTAGGGCTGCAGTACATCCAGCTTAGGGTAATAGCATTAGTAGGTCTCCATATGCACTGCGATAAATCTCGTATGCTGTGATGAGAGTGTTTTCCCATGCGTTGAAGCGGGGAGAGTTGGTGTATGATAATCTATCCTATGAAATGTGCTTAGTTTGTACCTCTTGTTTCATTTCTACATACGTTGAGCTGTATGTGAAAATAGAAAATCTCTTGCCCTAATTTAGATGTATGCTCGACTTGGTTATAATTTTA</genome_strand>
        <mrna_strand>AGCCCAACGATCACTTGCAACGGATCTGATATTTTCTCCTTCACTCTTCTTCATCTTTCGACTCCCTCCATTTTTCTTTCTCTTCACCTTCTCCTATAACTCCACCGGAAAAAAAATATCTCAACTGAATATCTACATTAATCTCAAACGGCCGGAGTAGTATGCCGGTTGAAGTAGCAAACGTAGTGACAGAAGCCATTGGTAATCCAAAAGGCGATTTGAGACCTCAAAACCCTAACGCCGCCTCTAAGAAGTCGAAGGAAAGCGACCGACGCCGTAGGCGGAGGAAGCAGAAGAAGAACAAGGCGGCGTCTAAGGTTGCAAATGGAGAAGACAGTGATAACGCTGCGCAAGACGCGAACGGCGGCGCTGAGGATAGTTCCAAGGAAAATTCCGATCCTCAGAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTGGTTCAAGTTGAAGTAGAATATGTACCAGAGAAGGCCGAATTAGATGGTGAGTTCGATGAGGAATTCAGGAAGGTTTTTGAGAAATTCACTTTCACGGATGCTACTGGTTCTGAG.............................................................................................GAGAATGATAAAAAGGATGAAACTGCTGCTGATGGAGCCTCAAAGAAAAAGGCGGATTCTGATTCTGAGGAGGAAGAAGAGGATGCACAGCAAAAGGAGAAGGGAGTCTCGAACAAAAAGAAAAAA...................................................................................................CTTCAGCGTAGGATGAAAATTGCAGAACTGAAACAAATCTCTATGAAGCCTGATGTTGTTGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATGGGATGCCACTGCAGCAGACCCTAAGCTCCTGGTATTTCTGAAATCTTACCGGAATACTGTTCCTGTTCCAAGACACTGGTGTCAGAAACGGAAATTTTTGCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGAAGCGTGGGATTGAGAAACAGCCATTTCAACTTCCTGACTTTATAGCTGCGACAGGAATTGAGAAAATTAGACAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTATATTGAAAAGGAGGACAGTAAGAAGCTTAAACAAAAGCACCGGGAAAGGATGCAGCCAAAAATGGGGAAGATGGATATCGATTATCAG...............................................................................................................GTTCTACATGACGCCTTTTTTAAGTATCAAACTAAACCAAAGTTGACATCCCTTGGTGATCTGTATTATGAAGGAAAAGAGTTTGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAGTTGAGGGAAATGAAACCTGGAACTTTGTCTTCATGAACTGAAAGAGGCCCTTGGTATGCCTGAAGGTGCTCCTCCTCCATGGCTCATCAATATGCAG............................................................................................................................AGATATGGTCCTCCACCCTCTTATCCTCAGCTGAAGATTCCTGGACTGAATGCTCCTATTCCACATGGAGCCAAGTTCGGTTATCAGCCGGGAGGTTGGGGTAAACCACCTGTTGATGAA................................................................................................................TATGGGCGCCCTTTATACGGAGATGTCTTTGGTGTATTGCAACAAGATCAGCCTAATTATGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGAACCTGTTGATAAGACTAAACATTGGGGTGACTTGGAGGAAGAGGAAGAAGAGGAGGAAGAGGAGGAAGAAGAAGAGATGGAGGAAGAGGAGATGGAGGACGGTATTCAGTCAGTGGACAGTCTTTCAAG............................................................................................................................................................TACTCCTACTGGAGTTGAGACTCCTGATGTTATTGACCTTCGCAAGCAGCAGAGGAAGGAGCCCGAGAAGCCCCTCTACCAG........................................................................................GTGCTTGAAGAAAAAGAAGAAAAGGTAGCTCCTGGTACTCTTCTTGGAACAAGCCATAC........................................................................................................GTATGTGATCAACACTGGCGCTCAAGACAAGGCTGGTGCCAAAAGG.................................................................................................................................................................................................................................................................................................................................................................................................GTTGATCTGCTCAAAGGTCAGAAGTCGGATAGAGTTGATGTCACATTGGCACCTGAAGAGTTGGAACTTATGGACAATGTTTTACCAGCCAA........................................................................................ATACGAGGAAGCTAGAGAGGAAGAGAAGCTCCGTAGCCAGCGTGAGGATTTCAGTGACATGGTAGCAGAG...................................................................................................................AATGAGAAGAAGAGGAAGCGTAAAATGCAGGAGAAGGATGGCAAGTCGAAGAAGAAGGATTTCAAGTTTTGAGGTTCTGATATATTGTTCCATCTAGTTTAGGGCTGCAGTACATCCAGCTTAGGGTAATAGCATTAGTAGGTCTCCATATGCACTGCGATAAATCTCGTATGCTGTGATGAGAGTGTTTTCCCATGCGTTGAAGCGGGGAGAGTTGGTGTATGATAATCTATCCTATGAAATGTGCTTAGTTTGTACCTCTTGTTTCATTTCTACATACGTTGAGCTGTATGTGAAAATAGAAAATCTCTTGCCCTAATTTAGATGTATGCTCGACTTGGTTATAATTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U595859" ref_strand="+" ref_description="SGN-U595859 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|146674816|gb|ABQ42347.1| (e_value=5e-32) Dof6; (*ATH) AT4G24060.1 (e_value=3e-25) | Symbol: None | Dof-type zinc finger domain-containing protein, Dof zinc finger protein - Oryza sativa,PID:d1042342 | chr4:12503821-12505656 FORWARD | Aliases: T19F6.50, T19F6_50; (*SWP) sp|Q8LAP8|DOF46_ARATH (e_value=3e-24) Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana GN=DOF4.6; ">
      <seq>gccgggggtatcaagatccaaacgcaaaaattatacattagaaatcaatacgtcgattgtttcgtttctgtatactaaaattatatatttcattgctcaggtagcgaaggttcatttgtttatcgatttatggggttgagtactaagttggtttcaattgatgatgatggtctagataattggaccaccaccacccacaatactcgaccggaaccaccgtcgataaggcggcagctgccgtcgaaatcggagtcgttgaaatgtccaaggtgtgattcaatcaacacaaaattttgttattacaacaattacaacaagtcacagcctaaacattattgtaaaggttgtaagaggcattggaccgaaggtggcaccctacgtaacgttccggtaggcggtgggcgaaaaaataagcgtgtaagacctactgatcccgttgatcatataaatggaaggaaacatgtcaaattagaagtaaacgatcagaggtgtccactaatcacaacgacgagtatgaccaatagtattattacaagttccatattgccaagtgtcacattaataaggggaaatagtactattactagtgctatagatgaagatatcaaaaatcttacttcatcctcattaccttatgacatattttcaaatatttctcaagatcatgggaatacacatttttcattaattcccaattctagtactaatactcaattatcttcaaacgtttattataattatgaacatatggggaagtttgatagtacaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0127N23.1" temp_strand="+" temp_description="C02SLm0127N23.1  AC232778.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0127N23 sequenced_by:kribb upload_account_name:korea">
        <position start="83196" stop="84558"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83489" g_stop="84258" g_length="770"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="770" r_length="770" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0127N23.1" gen_strand="+" ref_id="SGN-U595859" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>770</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0127N23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U595859" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83489" e_stop="84258"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTCTTGTATCAAGATCCAAACGCAAAAATTATACATTAGAAATCAATACGTCGATTGTTTCGTTTCTGTATACTAGAATTATATATTTCATTGCTCAGGTAGCGAAGGTTCATTTGTTTATCGATTTATGGGGTTGAGTACTAAGTTGGTTTCAATTGATGATGATGGTCTAGATAATTGGACCACCACCACCCACAATACTCGACCGGAACCACCGTCGATAAGGCGGCAGCTGCCGTCGAAATCGGAGTCGTTGAAATGTCCAAGGTGTGATTCAATCAACACAAAATTTTGTTATTACAACAATTACAACAAGTCACAGCCTAGACATTATTGTAAAGGTTGTAAGAGGCATTGGACCGAAGGTGGCACCCTACGTAACGTTCCGGTAGGCGGTGGGCGAAAAAATAAGCGTGTAAGACCTACTGATCCCGTTGATCATATAAATGGAAGGAAACATGTCAGATTAGAAGTAAACGATCAGAGGTGTCCACTAATCACAACGACGAGTATGACCAATAGTATTATTACAAGTTCCATATTGCCAAGTGTCACATTAATAAGGGGAAATAGTACTATTACTAGTGCTATAGATGAAGATATCAAAAATCTTACTTCATCCTCATTACCTTATGACATATTTTCAAATATTTCTCAAGATCATGGGAATACACATTTTTCATTAATTCCCAATTCTAGTACTAATACTCAATTATCTTCAAACGTTTATTATAATTATGAACATATGGGGAAGTTTGATAGTACAAT</genome_strand>
        <mrna_strand>GCCGGGGGTATCAAGATCCAAACGCAAAAATTATACATTAGAAATCAATACGTCGATTGTTTCGTTTCTGTATACTAAAATTATATATTTCATTGCTCAGGTAGCGAAGGTTCATTTGTTTATCGATTTATGGGGTTGAGTACTAAGTTGGTTTCAATTGATGATGATGGTCTAGATAATTGGACCACCACCACCCACAATACTCGACCGGAACCACCGTCGATAAGGCGGCAGCTGCCGTCGAAATCGGAGTCGTTGAAATGTCCAAGGTGTGATTCAATCAACACAAAATTTTGTTATTACAACAATTACAACAAGTCACAGCCTAAACATTATTGTAAAGGTTGTAAGAGGCATTGGACCGAAGGTGGCACCCTACGTAACGTTCCGGTAGGCGGTGGGCGAAAAAATAAGCGTGTAAGACCTACTGATCCCGTTGATCATATAAATGGAAGGAAACATGTCAAATTAGAAGTAAACGATCAGAGGTGTCCACTAATCACAACGACGAGTATGACCAATAGTATTATTACAAGTTCCATATTGCCAAGTGTCACATTAATAAGGGGAAATAGTACTATTACTAGTGCTATAGATGAAGATATCAAAAATCTTACTTCATCCTCATTACCTTATGACATATTTTCAAATATTTCTCAAGATCATGGGAATACACATTTTTCATTAATTCCCAATTCTAGTACTAATACTCAATTATCTTCAAACGTTTATTATAATTATGAACATATGGGGAAGTTTGATAGTACAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U569941" ref_strand="+" ref_description="SGN-U569941 Tomato 200607#2 [11 ESTs aligned] (*GB) gi|157327966|emb|CAO16930.1| (e_value=4e-53) unnamed; (*ATH) AT1G61065.1 (e_value=2e-50) | Symbol: None | expressed protein | chr1:22493909-22495126 REVERSE | Aliases: None; ">
      <seq>aaaagggataatgtaggttcaagtacaaacgcaaaaattaaattgcatatattatttatgcagtgatactggcttaaaatctaactctcagaatgctagtataatttatactatattatatttttttttatacacaaccaattaaatgttgcattatcttctacaagttttatactgagattagttgcactaataacactaggccacctcttaaaatagatagcaaaaatataaagtttgtatagcaagatggcttcaacactgttactagttttggtttttgtgcttgatttgattgcttttggacttgctgttgctgctgagcagaggagggctactgcaacgatcaacagagatgcagagtataactactgtgtgtatgagtcagatgttgcaactggcttgggcgtgggttcattcttctttcttttatctagtcagctcctcataatgtttgcaagccgatgtttatgctgtgggagggcactgcgaccaggaaagccccgatcatgggctattgtcttattcatcacctgctgggtcaccttctttattgctgaagtgtgcttactggcggcttccgttaggaatgcctaccacacaaagtataggacttacttggcacaacatcctccatcctgcgaggttttgaggaagggagtctttggtgctggcgctgcttttattgttttcacaggcatcgtctctgaacttttctacgtcagctattccaaggccgatgaaggatccattcctccaagaatggatggtggcataaggatgaatgcgttcatgtgaatccattgagcagaaggaggttttggttgtatactctctaagcttttgcacttacttagactgtgatattggtaacgtggtatacttaaccctgttggcttgctgatttgacttcaacagaattagagattctgatcatttgtcgcgactttatgtgcatccttcatcattgtccaaaatttctgagtagggatatagacatagatagatataactgctacttgtgatttctgttatacaatgttttgaagaaagttttctggggccttgagatgattctaatgttcctataatcctattgccatttcacaatctgttttagtagaatattcatttttcttgacacggtttgaaactcagtgaataatggttctgcccgccctaccatccttccccccaaatgggtttgaatacctgttatgtgattgtgattgtgattgtaatagtgataacagataagtgtcatataaatatgttatcatttcatttataattaattacgatatattttcacctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0127N23.1" temp_strand="-" temp_description="C02SLm0127N23.1  AC232778.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0127N23 sequenced_by:kribb upload_account_name:korea">
        <position start="89702" stop="85304"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="89403" g_stop="89185" g_length="219"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="219" r_length="219" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="89184" i_stop="88874" i_length="311">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="88873" g_stop="88754" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="220" r_stop="339" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="88753" i_stop="86716" i_length="2038">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="86715" g_stop="86516" g_length="200"/>
          <reference_exon_boundary r_type="cDNA" r_start="340" r_stop="539" r_length="200" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="86515" i_stop="86380" i_length="136">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="86379" g_stop="85604" g_length="776"/>
          <reference_exon_boundary r_type="cDNA" r_start="540" r_stop="1315" r_length="776" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0127N23.1" gen_strand="-" ref_id="SGN-U569941" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1315</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0127N23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U569941" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="89403" e_stop="89185"/>
          <exon e_start="88873" e_stop="88754"/>
          <exon e_start="86715" e_stop="86516"/>
          <exon e_start="86379" e_stop="85604"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAGGGATAATGTAGGTTCAAGTACAAACGCAAAAATTAAATTGCATATATTATTTATGCAGTGATACTGGCTTAAAATCTAACTCTCAGAATGCTAGTATAATTTATACTATATTATATTTTTTTTTATACACAACCAATTAAATGTTGCATTATCTTCTACAAGTTTTATACTGAGATTAGTTGCACTAATAACACTAGGCCACCTCTTAAAATAGGTAAGTTGGGTTTAAACATAAACCTATTTTTATATTTTCATACATAGCGAGGAATATTGCATCAACAATGCTAACTTTTTTGTATAAATAAGTAGAAAAAACTGATGTAACGTAATTTAGACATCAGGTACCCCTTCCTTCCATAGCCTTGCACCTTTTGCTTCCTCACCAAGTAGCCCTTTAAAATTCAAATACTTTTTTTTTTTTTTGGATATGTTAAGTCTAAATTTGATTTCTAGCTTACGTATACGCATGAGTTTTTAGTTTTTTGTGCATAAATATAGGTTGTTTGGGTTTGATTTTGGTTGCAGATAGCAAAAATATAAAGTTTGTATAGCAAGATGGCTTCAACACTGTTACTAGTTTTGGTTTTTGTGCTTGATTTGATTGCTTTTGGACTTGCTGTTGCTGCTGAGCAGAGGAGGGCTACTGTGAGTTCTTTTGCGATAATTCTTCTTCTGTTTTGCTCTTTCCTGTATGTTTTATTGTTATATTCTTCGTTCATCTTTCAGTATCATACTATATACTACTGTATTGGAGTTTTTTTGGTGTGGGTTTGTATGTTTAGGAATCGAAGAAATTATGTAGTAGCTATTTTAGAGGGTAAATAAATTCTCGACCCATAAAATTCTTCGTGTATTATGAACAGTAATTATGGTTTAGAACTAGCCAGGTTGAAGATAGTTGGATTATGCTATAGTATATAGTTTATAGCTTGTTGAGATGATATCCATGGAAGGACCCAGAAGTTGATTTAATGAACTTTTGAATTTTGAACAAGTAGGGTCATGCCCCTCTACTGGCCTACTACATGTGTCTGCTTATTGTTGTCGTCTATCAGATTACAGTCAAATTTCTTTCTAGGGTTTGGCAATATGGGACCTCTATGTATTCTGTTATATTGAGTGGCTTCTCATTTCTCAAATGGTGACTCAACTAGTAATAGTTATTATCTCAGAAAAATGATTTTCTAACTATCTGAGAATCTAATCCTCATTTTATGTAAGTAATGTCTTTTGAGTCTAATTAGAGGTTCTTTGCAAATCAAGGTTTTGTAAATTTTACACTTACCCCTATTCGAACTTAATGTAAGCGTCACAACATCAACAACTTAAGTTTAATCTGACCAGTGTTGGTAAATTGGATCCGTGCTTCCATTATGTATTATGTTTGCTAAGGCCTAAGTTCACATTGATACCTACAAATTCCTCCATCTGTTCATAGATCTACCTTGTTCGCTTTTATTACCATCTATCGCCATAGTGTCACATCTACAGATTAGTTTACATATGCTGAAGCTTGTCGTGATATCAGGTCAATTTTGTTACCTGAATAAAGGACTTGGTGACTTAGATGCTTTTAGTTATGTCAATCAAATATTAAGTTAGAAGCATTATTTTCCCATTCTCATTGTTATATAAGCACGTGAATAGATTTGCAAGTCTGACCTGAGATAATTCCCTATCCAACTTCTTGGGTGTGGATAAACTTGGAAGGAGTGCTAGTTATATCCTTTATTCAGTTGATTTAAAAAGGTTGTTTCGATGCTTTGATATTCCGCAAGTAACTTGATGCTCTTTTAAGATTTGGATAATCAAATTAGAAAAGTAACTTGTTCAGTCACATCGCCATATAAACAAGTGAGTGGATTAGAAAGTGTGGCCAGAGATCTCAAGTACATGTGGACCTTCCCTTTCAAGATACTATGCATCAACTTCATCCATGGTATTATTACATCTTGCTTGGTGTTCTCTCTTCTTCCCTTGAATCTCCGTGCGTGTGGTTGGAAGGTGAGGTGATTATAATCTTTTGTTAGGTCTGTATTAAATCAACCCCAATATGTATGTCTACTCTCTAAGAGAGTTAACCAATGTTGATGTCCTTGATCAAATGCAAGTGGAGTAGAAGTTGTCCGAGCATGTGAGTCTTTACGTGATCTGATGTGATAAGAGTTCTCATTGACTTTTTGAGGTTAGCAGACAGGAACCGATCATGACAGACTAGTTCTGCAAGAACAGCGAAGTTACCAAGTAACACGTACATATTCAAAATGGACATGGTTCATAGCTTACATGCAGGGACGGTTATAGTCGTTGTAGGAGCCAACTTAGATGGTGGCCTAAGGGGAAATGTGAGATTTCAGAGCAGTTAGAAGAAGTAACTGATAGAAATCAAGATCTGCGCTAATTGCTTAGTGTTTTAGTTTAATATTATAACAGCATTTCTGACTTAGCTATTTTTGCTATAAGGTTGATGTTTCTATACTTGACAATGTTTAGTACTAATAATATACAGTAACTGATAGAAATCAAGATCTGCGCTAATTGCTTAGGGTTTTAGTTTAAAATTATAAAAGCATTTCTGACTTAGCTATTTTTTGCTATAAGGTTGATGTTTCTATACTTGACAACATTTAGTATTAATAATATACATTTTCAGTAAGTTTAATTTTTGGGTTCTTTATTTCAGGCAACGATCAACAGAGATGCAGAGTATAACTACTGTGTGTATGAGTCAGATGTTGCAACTGGCTTGGGCGTGGGTTCATTCTTCTTTCTTTTATCTAGTCAGCTCCTCATAATGTTTGCAAGCCGATGTTTATGCTGTGGGAGGGCACTGCGACCAGGAAAGCCCCGATCATGGGCTATTGTCTTATTCATCACCTGCTGGTATGTTTCTCTGTAAACATGGTTCATGAACTACATTTTAGTGTTTGCTAGCCAGAGTAGAGACATAATGATTTCACTGATGTATGCAAGAATCTATTCAAATATGAGAGAAACAATTATGTCTTGAATTTTTCAGGGTCACCTTCTTTATTGCTGAAGTGTGCTTACTGGCGGCTTCCGTTAGGAATGCCTACCACACAAAGTATAGGACTTACTTGGCACAACATCCTCCATCCTGCGAGGTTTTGAGGAAGGGAGTCTTTGGTGCTGGCGCTGCTTTTATTGTTTTCACAGGCATCGTCTCTGAACTTTTCTACGTCAGCTATTCCAAGGCCGATGAAGGATCCATTCCTCCAAGAATGGATGGTGGCATAAGGATGAATGCGTTCATGTGAATCCATTGAGCAGAAGGAGGTTTTGGTTGTATACTCTCTAAGCTTTTGCACTTACTTAGACTGTGATATTGGTAACGTGGTATACTTAACCCTGTTGGCTTGCTGATTTGACTTCAACAGAATTAGAGATTCTGATCATTTGTCGCGACTTTATGTGCATCCTTCATCATTGTCCAAAATTTCTGAGTAGGGATATAGACATAGATAGATATAACTGCTACTTGTGATTTCTGTTATACAATGTTTTGAAGAAAGTTTTCTGGGGCCTTGAGATGATTCTAATGTTCCTATAATCCTATTGCCATTTCACAATCTGTTTTAGTAGAATATTCATTTTTCTTGACACGGTTTGAAACTCAGTGAATAATGGTTCTGCCCGCCCTACTATCCTTCCCCCCAAATGGGTTTGAATACCTGTTATGTGATTGTGATTGTGATTGTAATAGTGATAACAGATAAGTGTCATATAAATATGTTATCATTTCATTTATAATTAATTACGATATATTTTCACCTC</genome_strand>
        <mrna_strand>AAAAGGGATAATGTAGGTTCAAGTACAAACGCAAAAATTAAATTGCATATATTATTTATGCAGTGATACTGGCTTAAAATCTAACTCTCAGAATGCTAGTATAATTTATACTATATTATATTTTTTTTTATACACAACCAATTAAATGTTGCATTATCTTCTACAAGTTTTATACTGAGATTAGTTGCACTAATAACACTAGGCCACCTCTTAAAATAG.......................................................................................................................................................................................................................................................................................................................ATAGCAAAAATATAAAGTTTGTATAGCAAGATGGCTTCAACACTGTTACTAGTTTTGGTTTTTGTGCTTGATTTGATTGCTTTTGGACTTGCTGTTGCTGCTGAGCAGAGGAGGGCTACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACGATCAACAGAGATGCAGAGTATAACTACTGTGTGTATGAGTCAGATGTTGCAACTGGCTTGGGCGTGGGTTCATTCTTCTTTCTTTTATCTAGTCAGCTCCTCATAATGTTTGCAAGCCGATGTTTATGCTGTGGGAGGGCACTGCGACCAGGAAAGCCCCGATCATGGGCTATTGTCTTATTCATCACCTGCTG........................................................................................................................................GGTCACCTTCTTTATTGCTGAAGTGTGCTTACTGGCGGCTTCCGTTAGGAATGCCTACCACACAAAGTATAGGACTTACTTGGCACAACATCCTCCATCCTGCGAGGTTTTGAGGAAGGGAGTCTTTGGTGCTGGCGCTGCTTTTATTGTTTTCACAGGCATCGTCTCTGAACTTTTCTACGTCAGCTATTCCAAGGCCGATGAAGGATCCATTCCTCCAAGAATGGATGGTGGCATAAGGATGAATGCGTTCATGTGAATCCATTGAGCAGAAGGAGGTTTTGGTTGTATACTCTCTAAGCTTTTGCACTTACTTAGACTGTGATATTGGTAACGTGGTATACTTAACCCTGTTGGCTTGCTGATTTGACTTCAACAGAATTAGAGATTCTGATCATTTGTCGCGACTTTATGTGCATCCTTCATCATTGTCCAAAATTTCTGAGTAGGGATATAGACATAGATAGATATAACTGCTACTTGTGATTTCTGTTATACAATGTTTTGAAGAAAGTTTTCTGGGGCCTTGAGATGATTCTAATGTTCCTATAATCCTATTGCCATTTCACAATCTGTTTTAGTAGAATATTCATTTTTCTTGACACGGTTTGAAACTCAGTGAATAATGGTTCTGCCCGCCCTACCATCCTTCCCCCCAAATGGGTTTGAATACCTGTTATGTGATTGTGATTGTGATTGTAATAGTGATAACAGATAAGTGTCATATAAATATGTTATCATTTCATTTATAATTAATTACGATATATTTTCACCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U567391" ref_strand="+" ref_description="SGN-U567391 Tomato 200607#2 [2 ESTs aligned] ">
      <seq>tatctcacatgctcggacaacttctactccacttgcatttgatcaaggacatcaacattggttaactctcttagagagtagacatacatattggggttgatttaatacagacctaacaaaagattataatcacctcaccttccaaccacacgcacggagattcaagggaagaagagagaacaccaagcaagatgtaataataccatggatgaagttgatgcatagtatcttgaaagggaaggtccacatgtacttgagatctctggccacactttctaatccactcacttgtttatatggcgatgtgactgaacaagttacttttctaatttgattatccaaatcttaaaaaagcatcaagttacttgcggaatatcaaagcatcgaaacaacctttttaaatcaactgaataaaggatataactagcactccttccaagtttatccacacccaagaagttggatagggaattatctcaggtcagacttgcaaatctattcacgtgcttatataacaatgagaatgggaaaataatgcttctaacttaatatttgattgacataactaaaagcatctaagtcaccaagtcctttattcaggtaacaaaattgacctgatatcacgacaagcttcagcatatgtaaactaatctgtagatgtgacactatggcgatagatggtaataaaagcgaacaaggtagatctatgaacagatggaggaatttgtaggtatcaatgtgaacttaggccttagcaaaataatacataatggaagcacgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0127N23.1" temp_strand="+" temp_description="C02SLm0127N23.1  AC232778.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0127N23 sequenced_by:kribb upload_account_name:korea">
        <position start="86960" stop="88339"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="87257" g_stop="88039" g_length="783"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="782" r_length="782" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0127N23.1" gen_strand="+" ref_id="SGN-U567391" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>783</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0127N23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U567391" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="87257" e_stop="88039"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGACTCACATGCTCGGACAACTTCTACTCCACTTGCATTTGATCAAGGACATCAACATTGGTTAACTCTCTTAGAGAGTAGACATACATATTGGGGTTGATTTAATACAGACCTAACAAAAGATTATAATCACCTCACCTTCCAACCACACGCACGGAGATTCAAGGGAAGAAGAGAGAACACCAAGCAAGATGTAATAATACCATGGATGAAGTTGATGCATAGTATCTTGAAAGGGAAGGTCCACATGTACTTGAGATCTCTGGCCACACTTTCTAATCCACTCACTTGTTTATATGGCGATGTGACTGAACAAGTTACTTTTCTAATTTGATTATCCAAATCTTAAAAGAGCATCAAGTTACTTGCGGAATATCAAAGCATCGAAACAACCTTTTTAAATCAACTGAATAAAGGATATAACTAGCACTCCTTCCAAGTTTATCCACACCCAAGAAGTTGGATAGGGAATTATCTCAGGTCAGACTTGCAAATCTATTCACGTGCTTATATAACAATGAGAATGGGAAAATAATGCTTCTAACTTAATATTTGATTGACATAACTAAAAGCATCTAAGTCACCAAGTCCTTTATTCAGGTAACAAAATTGACCTGATATCACGACAAGCTTCAGCATATGTAAACTAATCTGTAGATGTGACACTATGGCGATAGATGGTAATAAAAGCGAACAAGGTAGATCTATGAACAGATGGAGGAATTTGTAGGTATCAATGTGAACTTAGGCCTTAGCAAACATAATACATAATGGAAGCACGGA</genome_strand>
        <mrna_strand>TATCTCACATGCTCGGACAACTTCTACTCCACTTGCATTTGATCAAGGACATCAACATTGGTTAACTCTCTTAGAGAGTAGACATACATATTGGGGTTGATTTAATACAGACCTAACAAAAGATTATAATCACCTCACCTTCCAACCACACGCACGGAGATTCAAGGGAAGAAGAGAGAACACCAAGCAAGATGTAATAATACCATGGATGAAGTTGATGCATAGTATCTTGAAAGGGAAGGTCCACATGTACTTGAGATCTCTGGCCACACTTTCTAATCCACTCACTTGTTTATATGGCGATGTGACTGAACAAGTTACTTTTCTAATTTGATTATCCAAATCTTAAAAAAGCATCAAGTTACTTGCGGAATATCAAAGCATCGAAACAACCTTTTTAAATCAACTGAATAAAGGATATAACTAGCACTCCTTCCAAGTTTATCCACACCCAAGAAGTTGGATAGGGAATTATCTCAGGTCAGACTTGCAAATCTATTCACGTGCTTATATAACAATGAGAATGGGAAAATAATGCTTCTAACTTAATATTTGATTGACATAACTAAAAGCATCTAAGTCACCAAGTCCTTTATTCAGGTAACAAAATTGACCTGATATCACGACAAGCTTCAGCATATGTAAACTAATCTGTAGATGTGACACTATGGCGATAGATGGTAATAAAAGCGAACAAGGTAGATCTATGAACAGATGGAGGAATTTGTAGGTATCAATGTGAACTTAGGCCTTAGCAAA-ATAATACATAATGGAAGCACGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U586091" ref_strand="+" ref_description="SGN-U586091 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|19912731|dbj|BAB88648.1| (e_value=6e-167) microtubule bundling polypeptide TMBP200 [Nicotiana tabacum]; (*ATH) AT2G35630.1 (e_value=8e-99) | Symbol: None | microtubule organization 1 protein (MOR1), identical to microtubule organization 1 protein GI:14317953 from (Arabidopsis thaliana) | chr2:14973757-14987661 FORWARD | Aliases: T20F21.17, T20F21_17; (*SWP) sp|Q14008|CKAP5_HUMAN (e_value=5e-14) Cytoskeleton-associated protein 5 OS=Homo sapiens GN=CKAP5; ">
      <seq>gcataggttcttcaaagcaccatatatgatgttgaccttgatcgcatccttcagagtattcacatttacctgcaagaattaggaatggaagagatcaggaggagagcgggagccgatgataaacctttaagaatggtgaaaactgtgctgcatgaacttgtcaagcttcgtggtactgccataaaaggtcatctgtccatggtgccaatcgacatgcaaccacctccaattattcttgcctacattgatcttaaccttcagaccttggccgctgcaaggatgttgactccgtctgtacctggccaaactcactggggtgattctgcagcaaataatccagcaccagcaacacataatgcagatgctcagttgaagcaggaacttgctgccatatttaagaagattggtgacaagcaaacctgcacaattggtctttatgagttataccggatcacacaattgtatcccaaggttgatatatttgctcagctgcaaaatgctagtgaggcattccgaacatatattagagatggtctagcccagatggaaaagaatgctgcggctggaaggactccttctagtgtacccatgccaactcctcctccgtcttcactaaacctgtcttctcccaaatttggtcctttatctcctgtaaataccaacccattgaatgatgcaaaatctgtaaacaataaaattgaaccatcacactttagtttgccaccgtcgtatggcgaagatgatagaggtggtaatgctctcccctcaagaggactatcatctgaacatttggagttgcagagaaatgatagattgccttctggagttactagtggaacactagaagcgatccgcgaaagaatgaaaagtatttcattagctactaccgtggggaatgcggacccaagtaatagaccactgatgtccatgaatggtaacatcagtcacgtggtgtcaaatcacggtcctggcactgaacattctagtgttgaaaataccattcagagtggggttcttcccatggatgagaaggcactttcagggctccaggcacgaatggagaggctgaagagtggatctatggaattctaggtattttttggaggcatttcccagtgaacttgcattataagatgctttgtgtttgccgagaaacaccttgaacatttatattgcagtcgtcagctcatgtctgattacaagtggaaagaaaggaaagttcgtcaagtgttgcctgccatctcaattttatgggacagaatctttgtgttcttgagatctcgtagataatgtaccataatggtttttttccggcagggttagctgtatatttttgtagagatatctactgatttgatttggtctaatttaattgagaggctctcgtgtgtttcgaaatcgtatgtcatgcctcaattgatagctagattccggctagatagttgaaactgttgtaagctgtatgatagctcttcaatgttgaaatcttcctattttcacgtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0127N23.1" temp_strand="-" temp_description="C02SLm0127N23.1  AC232778.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0127N23 sequenced_by:kribb upload_account_name:korea">
        <position start="92161" stop="89457"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91863" g_stop="91760" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="104" r_length="104" r_score="0.981"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91759" i_stop="91656" i_length="104">
            <donor d_prob="0.721" d_score="1.00"/>
            <acceptor a_prob="0.452" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91655" g_stop="91499" g_length="157"/>
          <reference_exon_boundary r_type="cDNA" r_start="105" r_stop="261" r_length="157" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91498" i_stop="91415" i_length="84">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.925" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91414" g_stop="91301" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="262" r_stop="375" r_length="114" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="91300" i_stop="91176" i_length="125">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="91175" g_stop="91080" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="376" r_stop="471" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="91079" i_stop="90988" i_length="92">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="90987" g_stop="90916" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="472" r_stop="543" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="90915" i_stop="90834" i_length="82">
            <donor d_prob="0.954" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="90833" g_stop="90551" g_length="283"/>
          <reference_exon_boundary r_type="cDNA" r_start="544" r_stop="826" r_length="283" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="90550" i_stop="90434" i_length="117">
            <donor d_prob="0.933" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="90433" g_stop="89757" g_length="677"/>
          <reference_exon_boundary r_type="cDNA" r_start="827" r_stop="1503" r_length="677" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0127N23.1" gen_strand="-" ref_id="SGN-U586091" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1503</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0127N23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U586091" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91863" e_stop="91760"/>
          <exon e_start="91655" e_stop="91499"/>
          <exon e_start="91414" e_stop="91301"/>
          <exon e_start="91175" e_stop="91080"/>
          <exon e_start="90987" e_stop="90916"/>
          <exon e_start="90833" e_stop="90551"/>
          <exon e_start="90433" e_stop="89757"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATAGGTTCTTCAAAGCACCATATATGATGTTGACCTTGATCGCATCCTTCAGAGTATTCACATTTACCTGCAAGAATTAGGAATGGAAGAGATCAGGAGGAGGTAGCTTTCAATTAGATTTGAGATTTTTCTTCTTTGGGTATGCACTTTAACATGGATTAATCAGCTATTTTCTTTCCTAATTCTTGTCTTATAAATACTGAAAGAGCGGGAGCCGATGATAAACCTTTAAGAATGGTGAAAACTGTGCTGCATGAACTTGTCAAGCTTCGTGGTACTGCCATAAAAGGTCATCTGTCCATGGTGCCAATCGACATGCAACCACCTCCAATTATTCTTGCCTACATTGATCTTAACCTTCAGGTTATGCAACTTTTAACTGCCATGTTGCTTTTTCTGCGCTAGTAATTCATGTGGAGTTCCCAATTGATGTTAATAATCTTTCAGACCTTGGCCGCTGCAAGGATGTTGACTCCGTCTGTACCTGGCCAAACTCACTGGGGTGATTCTGCAGCAAATAATCCAGCACCAGCAACACATAATGCAGATGCTCAGTTGAAGGTATAATGTGTGGCCTTTCTTTTCTAGCTTGTTTTTTCTTTCAAAAGTGAACTTTCCGTTGCAATATAATTTTGTTGCATCTTACTTGTGAATAACAATGTAGTGTTATGTTGTGTGTTTTACAGCAGGAACTTGCTGCCATATTTAAGAAGATTGGTGACAAGCAAACCTGCACAATTGGTCTTTATGAGTTATACCGGATCACACAATTGTATCCCAAGGTACAATGCTTTATCCTTTTTAGTGTCAACTTATTTCCTTGCCTTCAAAACTGAACTTCTTCTTGTAACACATTTTGTCCAATCTGTATTAGGTTGATATATTTGCTCAGCTGCAAAATGCTAGTGAGGCATTCCGAACATATATTAGAGATGGTCTAGCCCAGGTGTGCATTGGACCTCTGTGTACGACACATTTATAGATTTGTAGTCACTAGTCATGGAATAACTGTTCGCATGAAATTGCAGATGGAAAAGAATGCTGCGGCTGGAAGGACTCCTTCTAGTGTACCCATGCCAACTCCTCCTCCGTCTTCACTAAACCTGTCTTCTCCCAAATTTGGTCCTTTATCTCCTGTAAATACCAACCCATTGAATGATGCAAAATCTGTAAACAATAAAATTGAACCATCACACTTTAGTTTGCCACCGTCGTATGGCGAAGATGATAGAGGTGGTAATGCTCTCCCCTCAAGAGGACTATCATCTGAACATTTGGAGTTGCAGAGAAATGATAGATTGCCTTCTGGAGGTACACATGTGCCAGGCTATTTCTATTTTAGCCTTTGTGTTTTTCTTTCTTTTTTCATCTTTGATATATTAACTGTTCACTTCAAACGTCAGTTACAAAATAGTTTTTTTGATGCAGTTACTAGTGGAACACTAGAAGCGATCCGCGAAAGAATGAAAAGTATTTCATTAGCTACTACCGTGGGGAATGCGGACCCAAGTAATAGACCACTGATGTCCATGAATGGTAACATCAGTCACGTGGTGTCAAATCACGGTCCTGGCACTGAACATTCTAGTGTTGAAAATACCATTCAGAGTGGGGTTCTTCCCATGGATGAGAAGGCACTTTCAGGGCTCCAGGCACGAATGGAGAGGCTGAAGAGTGGATCTATGGAATTCTAGGTATTTTTTGGAGGCATTTCCCAGTGAACTTGCATTATAAGATGCTTTGTGTTTGCCGAGAAACACCTTGAACATTTATATTGCAGTCGTCAGCTCATGTCTGATTACAAGTGGAAAGAAAGGAAAGTTCGTCAAGTGTTGCCTGCCATCTCAATTTTATGGGACAGAATCTTTGTGTTCTTGAGATCTCGTAGATAATGTACCATAATGGTTTTTTTCCGGCAGGGTTAGCTGTATATTTTTGTAGAGATATCTACTGATTTGATTTGGTCTAATTTAATTGAGAGGCTCTCGTGTGTTTCGAAATCGTATGTCATGCCTCAATTGATAGCTAGATTCCGGCTAGATAGTTGAAACTGTTGTAAGCTGTATGATAGCTCTTCAATGTTGAAATCTTCCTATTTTCACGTT</genome_strand>
        <mrna_strand>GCATAGGTTCTTCAAAGCACCATATATGATGTTGACCTTGATCGCATCCTTCAGAGTATTCACATTTACCTGCAAGAATTAGGAATGGAAGAGATCAGGAGGAG........................................................................................................AGCGGGAGCCGATGATAAACCTTTAAGAATGGTGAAAACTGTGCTGCATGAACTTGTCAAGCTTCGTGGTACTGCCATAAAAGGTCATCTGTCCATGGTGCCAATCGACATGCAACCACCTCCAATTATTCTTGCCTACATTGATCTTAACCTTCAG....................................................................................ACCTTGGCCGCTGCAAGGATGTTGACTCCGTCTGTACCTGGCCAAACTCACTGGGGTGATTCTGCAGCAAATAATCCAGCACCAGCAACACATAATGCAGATGCTCAGTTGAAG.............................................................................................................................CAGGAACTTGCTGCCATATTTAAGAAGATTGGTGACAAGCAAACCTGCACAATTGGTCTTTATGAGTTATACCGGATCACACAATTGTATCCCAAG............................................................................................GTTGATATATTTGCTCAGCTGCAAAATGCTAGTGAGGCATTCCGAACATATATTAGAGATGGTCTAGCCCAG..................................................................................ATGGAAAAGAATGCTGCGGCTGGAAGGACTCCTTCTAGTGTACCCATGCCAACTCCTCCTCCGTCTTCACTAAACCTGTCTTCTCCCAAATTTGGTCCTTTATCTCCTGTAAATACCAACCCATTGAATGATGCAAAATCTGTAAACAATAAAATTGAACCATCACACTTTAGTTTGCCACCGTCGTATGGCGAAGATGATAGAGGTGGTAATGCTCTCCCCTCAAGAGGACTATCATCTGAACATTTGGAGTTGCAGAGAAATGATAGATTGCCTTCTGGAG.....................................................................................................................TTACTAGTGGAACACTAGAAGCGATCCGCGAAAGAATGAAAAGTATTTCATTAGCTACTACCGTGGGGAATGCGGACCCAAGTAATAGACCACTGATGTCCATGAATGGTAACATCAGTCACGTGGTGTCAAATCACGGTCCTGGCACTGAACATTCTAGTGTTGAAAATACCATTCAGAGTGGGGTTCTTCCCATGGATGAGAAGGCACTTTCAGGGCTCCAGGCACGAATGGAGAGGCTGAAGAGTGGATCTATGGAATTCTAGGTATTTTTTGGAGGCATTTCCCAGTGAACTTGCATTATAAGATGCTTTGTGTTTGCCGAGAAACACCTTGAACATTTATATTGCAGTCGTCAGCTCATGTCTGATTACAAGTGGAAAGAAAGGAAAGTTCGTCAAGTGTTGCCTGCCATCTCAATTTTATGGGACAGAATCTTTGTGTTCTTGAGATCTCGTAGATAATGTACCATAATGGTTTTTTTCCGGCAGGGTTAGCTGTATATTTTTGTAGAGATATCTACTGATTTGATTTGGTCTAATTTAATTGAGAGGCTCTCGTGTGTTTCGAAATCGTATGTCATGCCTCAATTGATAGCTAGATTCCGGCTAGATAGTTGAAACTGTTGTAAGCTGTATGATAGCTCTTCAATGTTGAAATCTTCCTATTTTCACGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U604144" ref_strand="+" ref_description="SGN-U604144 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|19912731|dbj|BAB88648.1| (e_value=2e-94) microtubule bundling polypeptide TMBP200 [Nicotiana tabacum]; (*ATH) AT2G35630.1 (e_value=4e-76) | Symbol: None | microtubule organization 1 protein (MOR1), identical to microtubule organization 1 protein GI:14317953 from (Arabidopsis thaliana) | chr2:14973757-14987661 FORWARD | Aliases: T20F21.17, T20F21_17; ">
      <seq>ggctagggctgctttaaggcgttcagtgagggataacgggactgatctggcagagccgagcggtgaagtttcacggtcgacagctggcccaatcttaaatagggatatatataacaatacagagcttcccatggaaagaaatgtgaatctacggccagttgccggtacaattggtccatcagactggaatgaagctcttgatattatatcatatgattctcccgagcagtctgttgaaggaatgaaagttgtgtgccatttgttggccctagcaaccaatgatcctgaaggcagtgccatggatgaaattgtcaaagatgcagataggcttgtttcctgcttagcaaataaggtagcaaaaacttttgacttcagtctgatgggtgcatcttcaagatcttgcaaatatgttcttaacacactcatgcagacatttcagaataaaacgctttctcatgctgtaaaggagcgtaccctagatatcctcattactgaacttttgctttggcttcttgatgagagagtaccccgcatggatgatggcagtcagctcttgaaagcgttgaatgttctgatgctaaaaatcttggacaatgctgatagaacatcctccttcgttgtgctgattaatcta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0127N23.1" temp_strand="-" temp_description="C02SLm0127N23.1  AC232778.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0127N23 sequenced_by:kribb upload_account_name:korea">
        <position start="94648" stop="91918"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94349" g_stop="94311" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="39" r_length="39" r_score="0.974"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="94310" i_stop="93942" i_length="369">
            <donor d_prob="0.987" d_score="0.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="93941" g_stop="93879" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="40" r_stop="102" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="93878" i_stop="93789" i_length="90">
            <donor d_prob="0.904" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="93788" g_stop="93662" g_length="127"/>
          <reference_exon_boundary r_type="cDNA" r_start="103" r_stop="229" r_length="127" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="93661" i_stop="92948" i_length="714">
            <donor d_prob="0.938" d_score="1.00"/>
            <acceptor a_prob="0.966" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="92947" g_stop="92825" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="230" r_stop="352" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="92824" i_stop="92739" i_length="86">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.897" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="92738" g_stop="92661" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="353" r_stop="430" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="92660" i_stop="92521" i_length="140">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="92520" g_stop="92362" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="431" r_stop="589" r_length="159" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="92361" i_stop="92263" i_length="99">
            <donor d_prob="0.899" d_score="1.00"/>
            <acceptor a_prob="0.929" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="92262" g_stop="92218" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="590" r_stop="634" r_length="45" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0127N23.1" gen_strand="-" ref_id="SGN-U604144" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>634</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0127N23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U604144" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94349" e_stop="94311"/>
          <exon e_start="93941" e_stop="93879"/>
          <exon e_start="93788" e_stop="93662"/>
          <exon e_start="92947" e_stop="92825"/>
          <exon e_start="92738" e_stop="92661"/>
          <exon e_start="92520" e_stop="92362"/>
          <exon e_start="92262" e_stop="92218"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCTAGGGCTGCTTTAAGGCGTTCAGTGAGGGATAACGGGTATGTGTTTATTTGCTTATACTTGGATCGTCCTGTTCTTAGGATGTAGAAATTTTCAACTAGGCAAGAAACATCTTTTGTAGCGTATTGAGTTACCACTTCCCCTGGGATTGTAAATCCAACCTATAGGTTAGTCAGCTGTCCAGGACCTGGATTATAATTATATTATACTTTGCTGTCTAACTTACAAGTGGACGGTCTTCGTTTGAGTTCTAATTTGTCTTTACATTTGGTTTCAATGAAAAAAATATATTCAAAGGTAGAATACCACATATATTTGTGCTGTCGTTCTGTGTTTTGAACACTGGTTGAGCTCAAATTTTATGTTACTTTCGTCGTTGACACTGGATATTTTTGGTTGATCTTTAGGACTGATCTGGCAGAGCCGAGCGGTGAAGTTTCACGGTCGACAGCTGGCCCAATCTTAAATAGGTGACCTAGAGATCCTTGCATTTTTTTCTCCTACCAAACTGAATATGAGTTGCTAATTTATTTCTTTGTATGTTTATCTCTTCTTTCCAGGGATATATATAACAATACAGAGCTTCCCATGGAAAGAAATGTGAATCTACGGCCAGTTGCCGGTACAATTGGTCCATCAGACTGGAATGAAGCTCTTGATATTATATCATATGATTCTCCCGAGCAGGTTGTTTCCCATTTTCCTTTTCATGGATTAGGATTTACTCTCATCTTAATCCCTTGTCATACCCCGTGTTTATAGCAATGAAGGATTATATAAGCTTAAGTACTTCATACAAGTTCCATAAGTGGTATTCCACTCTTCCCCATCCTCTCCGGCACACCCATAGCTCCTGTCTCCACCCCCACCTTTAGTGTTTCCAGATTATCTGTTAATAACTTTGAAACAATATTTTCTGCTTACTTACTGAACACCAGAAAAAAAAGTAAGAAATCCATTTAGTTCCAAGAAAACATTTTCCACTGCGATGTTTTTCACACCCTGAACTATATTGGGTGATCCAAATGATTGCCAAAAAGTTAACACGATCCACAATGTTTGTGTTTTTGCTTAAGAATATGAATGGTTTTTGTCCCCATTGAAATATAGAATTTGGATCCCTAATTAGACTACTGGAGTTTTTTCTTTCTTCTTTGATTTTGGGGATAAATTTTCATTGCTAAATTTGTTACGAGTTTATCAAAAAAATGCATAAGTTGTCTAAATTTAGAACAACGTATGTTGCACAATTTTTCATAGCTGGTTATGGGTTCATCTTTGTGTTTGTATGTGTGTCTATGTCTTGGTTTTTCTGCTTCTATGGATATTAAAGAGATTAAAGAGGATGGAGGGTAACTGTCAATGATTCACTGATGCCATCATTTCTTTCGCTTGTTGCAGTCTGTTGAAGGAATGAAAGTTGTGTGCCATTTGTTGGCCCTAGCAACCAATGATCCTGAAGGCAGTGCCATGGATGAAATTGTCAAAGATGCAGATAGGCTTGTTTCCTGCTTAGCAAATAAGGTGCGATATGATTCATCTTTTGTTTAACTAACTCGTTGTTGTCTGTGTATATGCTTCAAAATGCTGATCTTCTAGATTTACTACAGGTAGCAAAAACTTTTGACTTCAGTCTGATGGGTGCATCTTCAAGATCTTGCAAATATGTTCTTAACACACTCATGCAGGCATGTGTTTATCCAATTTCTATTAATTCTGCAACAACTTTATTGTTTCCTTGTATATGTGATCATCAAGTATTTGTAAAATTGTTGGTCTCTCACGTATTTGGAAATATCTCAATTTCTGGCTGTTTCCTTGTTTGCAGACATTTCAGAATAAAACGCTTTCTCATGCTGTAAAGGAGCGTACCCTAGATATCCTCATTACTGAACTTTTGCTTTGGCTTCTTGATGAGAGAGTACCCCGCATGGATGATGGCAGTCAGCTCTTGAAAGCGTTGAATGTTCTGATGCTAAAAATCTTGGTACTTCTGCTTCTGATATTGCATTAAAGATTGCAGTTTATGTTTATTTTAGCTAGCTTGTCCTGATTTTGTTCTATCTATTTTTGGTCACTAATATAGGACAATGCTGATAGAACATCCTCCTTCGTTGTGCTGATTAATCTA</genome_strand>
        <mrna_strand>GGCTAGGGCTGCTTTAAGGCGTTCAGTGAGGGATAACGG.................................................................................................................................................................................................................................................................................................................................................................................GACTGATCTGGCAGAGCCGAGCGGTGAAGTTTCACGGTCGACAGCTGGCCCAATCTTAAATAG..........................................................................................GGATATATATAACAATACAGAGCTTCCCATGGAAAGAAATGTGAATCTACGGCCAGTTGCCGGTACAATTGGTCCATCAGACTGGAATGAAGCTCTTGATATTATATCATATGATTCTCCCGAGCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGTTGAAGGAATGAAAGTTGTGTGCCATTTGTTGGCCCTAGCAACCAATGATCCTGAAGGCAGTGCCATGGATGAAATTGTCAAAGATGCAGATAGGCTTGTTTCCTGCTTAGCAAATAAG......................................................................................GTAGCAAAAACTTTTGACTTCAGTCTGATGGGTGCATCTTCAAGATCTTGCAAATATGTTCTTAACACACTCATGCAG............................................................................................................................................ACATTTCAGAATAAAACGCTTTCTCATGCTGTAAAGGAGCGTACCCTAGATATCCTCATTACTGAACTTTTGCTTTGGCTTCTTGATGAGAGAGTACCCCGCATGGATGATGGCAGTCAGCTCTTGAAAGCGTTGAATGTTCTGATGCTAAAAATCTTG...................................................................................................GACAATGCTGATAGAACATCCTCCTTCGTTGTGCTGATTAATCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U582950" ref_strand="+" ref_description="SGN-U582950 Tomato 200607#2 [4 ESTs aligned] (*GB) gi|209981220|gb|ACJ04908.1| (e_value=5e-47) polyphenol; (*SWP) sp|P43311|PPO_VITVI (e_value=9e-42) Polyphenol oxidase, chloroplastic OS=Vitis vinifera; ">
      <seq>ggggacacctcaaacaagcaaagttatgtcttccattctatttcccactaccaatactctctcttcttcaactaccaacactttttccaacttgcattcttctcctttctttgcaaaaacatcaaaaatttcctccattagaaagcataatgtccatcgtaatttccaggtatcttgcaaaaccatanatgataataatcacgaacacaactcacccgtcgacatttctaaaaagaacgattcttcaaacaatatgatcgatanaagaaacgttctacttggattaggaggtttatatggtgcttctactcttgttggtggtcttcccttcgtccttgccgctccggtgaacggacccgacgttaccaaatgtggggccgcagacttgccaccaggtgcagaactggttaattgttgtcctccgatgagcggaagtatcatcgacttccagcttccgtcgtcatccaccccactccgtacacggccagcagctcattccgtggatagtgcctacattgagaaattcaacnnagctattcanctgatgaggcaacttcctgacgacgatccangtagcttcaaacaacaagcaaatattcactgtgcttattgngatggtgcttangatcaattnnggntcccnaattcnnanctccaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0127N23.1" temp_strand="+" temp_description="C02SLm0127N23.1  AC232778.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0127N23 sequenced_by:kribb upload_account_name:korea">
        <position start="128450" stop="130326"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="128746" g_stop="129140" g_length="395"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="395" r_length="395" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="129141" i_stop="129763" i_length="623">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.946" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="129764" g_stop="130026" g_length="263"/>
          <reference_exon_boundary r_type="cDNA" r_start="396" r_stop="658" r_length="263" r_score="0.947"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0127N23.1" gen_strand="+" ref_id="SGN-U582950" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>658</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0127N23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U582950" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="128746" e_stop="129140"/>
          <exon e_start="129764" e_stop="130026"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATACACCTCAAACAAGCAAAGTTATGTCTTCCATTCTATTTCCCACTACCAATACTCTCTCTTCTTCAACTACCAACACTTTTTCCAACTTGCATTCTTCTCCTTTCTTTGCAAAAACATCAAAAATTTCCTCCATTAGAAAGCATAATGTCCATCGTAATTTCCAGGTATCTTGCAAAACCATAGATGATAATAATCACGAACACAACTCACCCGTCGACATTTCTAAAAAGAACGATTCTTCAAACAATATGATCGATAGAAGAAACGTTCTACTTGGATTAGGAGGTTTATATGGTGCTTCTACTCTTGTTGGTGGTCTTCCCTTCGTCCTTGCCGCTCCGGTGAACGGACCCGACGTTACCAAATGTGGGGCCGCAGACTTGCCACCAGGTACGCTATCGTTATATAGTTTGTAATATATATATATACACGATTGTCCCACACATTGATCAATAGAAAAATAGTGATTTTAAAAGTTAAACGAATATAATGTTTATTCATGAAATAAGTAGGTTTATTTCAACTTCGTGAATAAATTAGTCTTTCTATGAGAAGTCATACCTGATAAAGTAGTTTCTTAAAAGGGAAAAAAGACGAAAATATTCTCAAACTATTGTAAATGGTATGCAGATATCATTCGTCATACTTTTGATATATTGGTGCTACTGTCATCTATAAACTAGAGTTTATATGCCCTTCACTCTAACGTAAGATTAAATAGGGACACGTAACGCAATCTTATTCATCGATCCGATGTCGGATCGGTGGATAAGATTATGACACGTGTATGTCCATTAGTATAAAACGTATATATGTTCTAATTTTTGGACGATAGGGGCACTAATTTCCTTAAAATATGATGACGGAGGTATTTGCATATCATTTACGATAGTTTGAAATATATTTATCCTTTTTTTAAAAAAAAATAAAATTATACTATAGGGACAATATCTCTTTAAGAAAAGTTATTTTGAGACAGCCTTAAAGTCATTTCTTGTCGATTGTTTTAACAGGTGCAGAACTGGTTAATTGTTGTCCTCCGATGAGCGGAAGTATCATCGACTTCCAGCTTCCGTCGTCATCCACCCCACTCCGTACACGGCCAGCAGCTCATTCCGTGGATAGTGCCTACATTGAGAAATTCAACAGAGCTATTCAGCTGATGAAGCAACTTCCTGACGACGATCCACGTAGCTTCAAACAACAAGCAAATATTCACTGTGCTTATTGTGATGGTGCTTATGATCAATTAGGGTTCCCAAATTCAGAGCTCCAA</genome_strand>
        <mrna_strand>GGGGACACCTCAAACAAGCAAAGTTATGTCTTCCATTCTATTTCCCACTACCAATACTCTCTCTTCTTCAACTACCAACACTTTTTCCAACTTGCATTCTTCTCCTTTCTTTGCAAAAACATCAAAAATTTCCTCCATTAGAAAGCATAATGTCCATCGTAATTTCCAGGTATCTTGCAAAACCATANATGATAATAATCACGAACACAACTCACCCGTCGACATTTCTAAAAAGAACGATTCTTCAAACAATATGATCGATANAAGAAACGTTCTACTTGGATTAGGAGGTTTATATGGTGCTTCTACTCTTGTTGGTGGTCTTCCCTTCGTCCTTGCCGCTCCGGTGAACGGACCCGACGTTACCAAATGTGGGGCCGCAGACTTGCCACCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCAGAACTGGTTAATTGTTGTCCTCCGATGAGCGGAAGTATCATCGACTTCCAGCTTCCGTCGTCATCCACCCCACTCCGTACACGGCCAGCAGCTCATTCCGTGGATAGTGCCTACATTGAGAAATTCAACNNAGCTATTCANCTGATGAGGCAACTTCCTGACGACGATCCANGTAGCTTCAAACAACAAGCAAATATTCACTGTGCTTATTGNGATGGTGCTTANGATCAATTNNGGNTCCCNAATTCNNANCTCCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U582951" ref_strand="+" ref_description="SGN-U582951 Tomato 200607#2 [4 ESTs aligned] (*GB) gi|209981220|gb|ACJ04908.1| (e_value=2e-51) polyphenol; (*SWP) sp|P43311|PPO_VITVI (e_value=1e-46) Polyphenol oxidase, chloroplastic OS=Vitis vinifera; ">
      <seq>ggggaaacaagcaaagttatgtcttccattctatttcccactaccaatactctctcttcttcaactaccaacactttttccaacttgcattcttctcctttctttgcaaaaacatcaaaaatttcctccattagaaagcataatgtccatcgtaatttccaggtatcttgcaaaaccatagatgataataatcacgaacacaactcacccgtcgacatttctaaaaagaacgattcttcaaacaatatgatcgatagaagaaacgttctacttggattaggaggtttatatggtgcttctactcttgttggtggtcttcccttcgtccttgccgctccggtgaacggacccgacgttaccaaatgtggggccgcagacttgccaccaggtgcagaactggttaattgttgtcctccgatgagcggaagtatcatcgacttccagcttccgtcgtcatccaccccactccgtacacggccagcagctcattccgtggatagtgcctacattgagaaattcaacagagctattcagctgatgaagcaacttcctgacgacgatccacgtagcttcaaacaacaagcaaatattcactgtgcttattgtgatggtgcttatgatcaatnagggntcccaantnnnagctccnagnnnnttcctcttgnattttcttccatttcatcgntgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0127N23.1" temp_strand="+" temp_description="C02SLm0127N23.1  AC232778.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0127N23 sequenced_by:kribb upload_account_name:korea">
        <position start="128457" stop="130365"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="128753" g_stop="129140" g_length="388"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="388" r_length="388" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="129141" i_stop="129763" i_length="623">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.946" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="129764" g_stop="130065" g_length="302"/>
          <reference_exon_boundary r_type="cDNA" r_start="389" r_stop="688" r_length="300" r_score="0.950"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0127N23.1" gen_strand="+" ref_id="SGN-U582951" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>690</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0127N23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U582951" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="128753" e_stop="129140"/>
          <exon e_start="129764" e_stop="130065"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTCAAACAAGCAAAGTTATGTCTTCCATTCTATTTCCCACTACCAATACTCTCTCTTCTTCAACTACCAACACTTTTTCCAACTTGCATTCTTCTCCTTTCTTTGCAAAAACATCAAAAATTTCCTCCATTAGAAAGCATAATGTCCATCGTAATTTCCAGGTATCTTGCAAAACCATAGATGATAATAATCACGAACACAACTCACCCGTCGACATTTCTAAAAAGAACGATTCTTCAAACAATATGATCGATAGAAGAAACGTTCTACTTGGATTAGGAGGTTTATATGGTGCTTCTACTCTTGTTGGTGGTCTTCCCTTCGTCCTTGCCGCTCCGGTGAACGGACCCGACGTTACCAAATGTGGGGCCGCAGACTTGCCACCAGGTACGCTATCGTTATATAGTTTGTAATATATATATATACACGATTGTCCCACACATTGATCAATAGAAAAATAGTGATTTTAAAAGTTAAACGAATATAATGTTTATTCATGAAATAAGTAGGTTTATTTCAACTTCGTGAATAAATTAGTCTTTCTATGAGAAGTCATACCTGATAAAGTAGTTTCTTAAAAGGGAAAAAAGACGAAAATATTCTCAAACTATTGTAAATGGTATGCAGATATCATTCGTCATACTTTTGATATATTGGTGCTACTGTCATCTATAAACTAGAGTTTATATGCCCTTCACTCTAACGTAAGATTAAATAGGGACACGTAACGCAATCTTATTCATCGATCCGATGTCGGATCGGTGGATAAGATTATGACACGTGTATGTCCATTAGTATAAAACGTATATATGTTCTAATTTTTGGACGATAGGGGCACTAATTTCCTTAAAATATGATGACGGAGGTATTTGCATATCATTTACGATAGTTTGAAATATATTTATCCTTTTTTTAAAAAAAAATAAAATTATACTATAGGGACAATATCTCTTTAAGAAAAGTTATTTTGAGACAGCCTTAAAGTCATTTCTTGTCGATTGTTTTAACAGGTGCAGAACTGGTTAATTGTTGTCCTCCGATGAGCGGAAGTATCATCGACTTCCAGCTTCCGTCGTCATCCACCCCACTCCGTACACGGCCAGCAGCTCATTCCGTGGATAGTGCCTACATTGAGAAATTCAACAGAGCTATTCAGCTGATGAAGCAACTTCCTGACGACGATCCACGTAGCTTCAAACAACAAGCAAATATTCACTGTGCTTATTGTGATGGTGCTTATGATCAATTAGGGTTCCCAAATTCAGAGCTCCAAGTTCATTCCTCTTGGATTTTTCTTCCATTTCATCGTTGT</genome_strand>
        <mrna_strand>GGGGAAACAAGCAAAGTTATGTCTTCCATTCTATTTCCCACTACCAATACTCTCTCTTCTTCAACTACCAACACTTTTTCCAACTTGCATTCTTCTCCTTTCTTTGCAAAAACATCAAAAATTTCCTCCATTAGAAAGCATAATGTCCATCGTAATTTCCAGGTATCTTGCAAAACCATAGATGATAATAATCACGAACACAACTCACCCGTCGACATTTCTAAAAAGAACGATTCTTCAAACAATATGATCGATAGAAGAAACGTTCTACTTGGATTAGGAGGTTTATATGGTGCTTCTACTCTTGTTGGTGGTCTTCCCTTCGTCCTTGCCGCTCCGGTGAACGGACCCGACGTTACCAAATGTGGGGCCGCAGACTTGCCACCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCAGAACTGGTTAATTGTTGTCCTCCGATGAGCGGAAGTATCATCGACTTCCAGCTTCCGTCGTCATCCACCCCACTCCGTACACGGCCAGCAGCTCATTCCGTGGATAGTGCCTACATTGAGAAATTCAACAGAGCTATTCAGCTGATGAAGCAACTTCCTGACGACGATCCACGTAGCTTCAAACAACAAGCAAATATTCACTGTGCTTATTGTGATGGTGCTTATGATCAATNAGGGNTCCC-AANTNNNAGCTCCNAGNNNNTTCCTCTTGNA-TTTTCTTCCATTTCATCGNTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U574784" ref_strand="+" ref_description="SGN-U574784 Tomato 200607#2 [11 ESTs aligned] (*GB) gi|193783415|emb|CAQ76694.1| (e_value=3e-21) polyphenol; (*SWP) sp|Q06215|PPO_VICFA (e_value=7e-19) Polyphenol oxidase A1, chloroplastic OS=Vicia faba; ">
      <seq>gatacgtttatcaaaacgtaaggaatcaatggataaattcgcgaccaacgcctagagtatcgcgggcgttgagtagcgtaaggaggctcgttgaagccagagcagctgatgacaataataataatattatgaattttcctagaccaaaagaaatatttcctacgaaacttgaccatgttataaaagttatggtaaaaaggccaaacaagaagaagaggaacaaaaaggagaaaaacgagagagaggagattttaattgttgaaggactacaagtgcaaagtaatgtgtttgttaagtttgatgttttgatcaatgacgaagatgaaacactgatttcaccagataatgctgagtttgctggaagttttgtgaacgtaccacatcatagtcatggtaaaggtgagaaaaattcgaaacgaaaaacgaagctaaaattagcgataactgagttgttggaggatttggatgctgaaaatgatgataatgtgttggtgacttttgtacccaagaatggttctggtgctgttaaaattgggggtgttaagattgtgcttgaggattagaaggaaaaaaaaaagaacaagtcattttaattaaatcaaaataatataagcatttcttgatgtattttcttttaattaatatcctactgtttctgattaatgttgcatttggacaatgtaacttgtgtagacatgatgtttgcatggaataaaggaaggaaaagtagttggatatatttttacgtaattattttgtctcattttgactgagaaaaaaaagagagagaggaattatatattgtgtaaaatttcttgtatgactttgaaataaaatgtattctcagtttcattttcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0127N23.1" temp_strand="+" temp_description="C02SLm0127N23.1  AC232778.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0127N23 sequenced_by:kribb upload_account_name:korea">
        <position start="130385" stop="131842"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="130685" g_stop="131542" g_length="858"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="858" r_length="858" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0127N23.1" gen_strand="+" ref_id="SGN-U574784" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>858</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0127N23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U574784" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="130685" e_stop="131542"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATACGTTTATCAAAACGTAAGGAATCAATGGATAAATTCGCGACCAACGCCTAGAGTATCGCGGGCGTTGAGTAGCGTAAGGAGGCTCGTTGAAGCCAGAGCAGCTGATGACAATAATAATAATATTATGAATTTTCCTAGACCAAAAGAAATATTTCCTACGAAACTTGACCATGTTATAAAAGTTATGGTAAAAAGGCCAAACAAGAAGAAGAGGAACAAAAAGGAGAAAAACGAGAGAGAGGAGATTTTAATTGTTGAAGGACTAGAAGTGGAGAGTGATGTGTTTGTTAAGTTTGATGTTTTGATCAATGACGAAGATGAAACACTGATTTCACCAGATAATGCTGAGTTTGCTGGAAGTTTTGTGAACGTACCACATCATAGTCATGGTAAAGGTGAGAAAAATTCGAAACGAAAAACGAAGCTAAAATTAGCGATAACTGAGTTGTTGGAGGATTTGGATGCTGAAAATGATGATAATGTGTTGGTGACTTTTGTACCCAAGAATGGTTCTGGTGCTGTTAAAATTGGGGGTGTTAAGATTGTGCTTGAGGATTAGAAGGAAAAAAAAAAGAACAAGTCATTTTAATTAAATCAAAATAATATAAGCATTTCTTGATGTATTTTCTTTTAATTAATATCCTACTGTTTCTGATTAATGTTGCATTTGGACAATGTAACTTGTGTAGACATGATGTTTGCATGGAATAAAGGAAGGAAAAGTAGTTGGATATATTTTTACGTAATTATTTTGTCTCATTTTGACTGAGAAAAAAAAGAGAGAGAGGAATTATATATTGTGTAAAATTTCTTGTATGACTTTGAAATAAAATGTATTCTCAGTTTCATTTTAC</genome_strand>
        <mrna_strand>GATACGTTTATCAAAACGTAAGGAATCAATGGATAAATTCGCGACCAACGCCTAGAGTATCGCGGGCGTTGAGTAGCGTAAGGAGGCTCGTTGAAGCCAGAGCAGCTGATGACAATAATAATAATATTATGAATTTTCCTAGACCAAAAGAAATATTTCCTACGAAACTTGACCATGTTATAAAAGTTATGGTAAAAAGGCCAAACAAGAAGAAGAGGAACAAAAAGGAGAAAAACGAGAGAGAGGAGATTTTAATTGTTGAAGGACTACAAGTGCAAAGTAATGTGTTTGTTAAGTTTGATGTTTTGATCAATGACGAAGATGAAACACTGATTTCACCAGATAATGCTGAGTTTGCTGGAAGTTTTGTGAACGTACCACATCATAGTCATGGTAAAGGTGAGAAAAATTCGAAACGAAAAACGAAGCTAAAATTAGCGATAACTGAGTTGTTGGAGGATTTGGATGCTGAAAATGATGATAATGTGTTGGTGACTTTTGTACCCAAGAATGGTTCTGGTGCTGTTAAAATTGGGGGTGTTAAGATTGTGCTTGAGGATTAGAAGGAAAAAAAAAAGAACAAGTCATTTTAATTAAATCAAAATAATATAAGCATTTCTTGATGTATTTTCTTTTAATTAATATCCTACTGTTTCTGATTAATGTTGCATTTGGACAATGTAACTTGTGTAGACATGATGTTTGCATGGAATAAAGGAAGGAAAAGTAGTTGGATATATTTTTACGTAATTATTTTGTCTCATTTTGACTGAGAAAAAAAAGAGAGAGAGGAATTATATATTGTGTAAAATTTCTTGTATGACTTTGAAATAAAATGTATTCTCAGTTTCATTTTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U600426" ref_strand="+" ref_description="SGN-U600426 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>gggaggaggtggtggtggtggtggtgggagtgcagatattggtttcataggatgttgtggtgttgctacattggctgatgacatgagaggtggcggaggaggaggaggaggctgtggaacaccacttggttttgctaacaatggagcaggccttgacccttctgcattccctgatgaattgggtactggtggaggtggaggtggaggtggtggttgtggtgctgctggtgcaaaagtcgatggttggttcaatgatatatctccatctggtgtgagtaaagaaatttgcagagtagatgttggtttttgcgagtctatgacattcaacgacaaagtgagtggtgattgttgccctgctccttgttctggaagtgaaggaggtaaaagcacatccaaggtaacatgtcctgacactggtagattatttttgacaccagttttacatgttccttcattttctgattgagcatccatactagtcggtagaatatctggcgagtctgtcatttcacaatcttgtccaaactcctcatcatctttggttttcacttgagaatctttctccgcttctacatctgacttttgttcattaactgtgcttgttaattgaacaacaaaatttgaatcttgagctgctacatttggaaacatatgaaaagagagacgctttacatcaataggattcagcttgccaactgcttggaccctga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0127N23.1" temp_strand="+" temp_description="C02SLm0127N23.1  AC232778.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0127N23 sequenced_by:kribb upload_account_name:korea">
        <position start="136178" stop="137481"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="136478" g_stop="137181" g_length="704"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="710" r_length="710" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0127N23.1" gen_strand="+" ref_id="SGN-U600426" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>704</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0127N23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U600426" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="136478" e_stop="137181"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGAGGAGGTGGTGGTGGTGGTGGTGGGAGTGCAGATATTGGTTTCATAGGATGTTGTGGTGTTGCTACATTGGCTGATGCCATGGGAGGTGGAGGAGGAGGAGGAGGAGGCTGTGGAACACCACTTGGTTTTGCTAACAATGGAGCAGGCCTTGACCCTTCTGCATTCCCTGATGAATTGGGTACTGGTGGAGGT----G-GG-GGTGGTGGTTGTGGTGCTGCTGGTGCAAAAGTCGATGGTTGGTTCAATGATATATCTCCATCTGGTGTGAGTAAAGAAATTTGCAGAGTAGATGTTGGTTTTTGCGAGTCTATGACATTCAACGACAAAGTGAGTGGTGATTGTTGCCCTGCTCCTTGTTCTGGAAGTGAAGGAGGTAAAAGCACATCCAAGGTAACATGTCCTGACACTGGTAGATTATTTTTGACACCAGTTTTACATGTTCCTTCATTTTCTGGTTGAGCATCCATACTAGTCGGTAGAATATCTGGTGAGTCTGTCATTTCACAATCTTGTCCAAACTCCTCATCATCTTTGGTTTTCACTTGAGAATCTTTCTCCGCTTCTACATCTGACTTTTGTTCATTAACTGTGCTTGTTAATTGAACAACAAAATTTGAATCTTGAGCTGCTACATTTGGAAACATATGAAAAGAGAGACGCTTTACATCAATAGGATTCAGCTTGCCAACTGCTTGAACCCTGA</genome_strand>
        <mrna_strand>GGGAGGAGGTGGTGGTGGTGGTGGTGGGAGTGCAGATATTGGTTTCATAGGATGTTGTGGTGTTGCTACATTGGCTGATGACATGAGAGGTGGCGGAGGAGGAGGAGGAGGCTGTGGAACACCACTTGGTTTTGCTAACAATGGAGCAGGCCTTGACCCTTCTGCATTCCCTGATGAATTGGGTACTGGTGGAGGTGGAGGTGGAGGTGGTGGTTGTGGTGCTGCTGGTGCAAAAGTCGATGGTTGGTTCAATGATATATCTCCATCTGGTGTGAGTAAAGAAATTTGCAGAGTAGATGTTGGTTTTTGCGAGTCTATGACATTCAACGACAAAGTGAGTGGTGATTGTTGCCCTGCTCCTTGTTCTGGAAGTGAAGGAGGTAAAAGCACATCCAAGGTAACATGTCCTGACACTGGTAGATTATTTTTGACACCAGTTTTACATGTTCCTTCATTTTCTGATTGAGCATCCATACTAGTCGGTAGAATATCTGGCGAGTCTGTCATTTCACAATCTTGTCCAAACTCCTCATCATCTTTGGTTTTCACTTGAGAATCTTTCTCCGCTTCTACATCTGACTTTTGTTCATTAACTGTGCTTGTTAATTGAACAACAAAATTTGAATCTTGAGCTGCTACATTTGGAAACATATGAAAAGAGAGACGCTTTACATCAATAGGATTCAGCTTGCCAACTGCTTGGACCCTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U566739" ref_strand="+" ref_description="SGN-U566739 Tomato 200607#2 [2 ESTs aligned] ">
      <seq>gattaattattcctattttgctctgcacgttatatgagtcttctttaatttatcaattttcctacaactattactaacattattttttaatcaatccaacaaacaaacattataatttttattttttttataataatattgaatgcttttgttcttcttcctcctcctccaacattcttttaataatttctattattctattgctttcattcaccggttttttgcgtcagcagataatatttctgttttttcaattgtcaaagttgacctggtaaattcatttttgtgttttttttcaatattgtataaaacttggtatttctcattagaaatggccattggagcatgctttggtgtgcctcctttcttttcacgcaggaagcatactacaacatatcaggaagaagagatgaaagagacaaagagaagtcctgttgtagaaaagaagaaaacacctcccatagcagtatcaaaaagttttaaatccaaaggttccacggttcgtaattcatctagagtagcagggaacttcataataatgactgagcttcggaacaagatccttaccttgagagacttgctcgacttgtccccttgtattggctctgcatctgtaaatgagctgctgcttttgacgctgaaagacctgcaacaactgtatcctacaatgaatccatctatttctttgtcaaaaatgatgaagcaccgatgcagcaggcactgcaattcttctttgatactctgatatcaattgggggaatgtggacagggcatgatgagtggatggtcaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0127N23.1" temp_strand="-" temp_description="C02SLm0127N23.1  AC232778.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0127N23 sequenced_by:kribb upload_account_name:korea">
        <position start="139691" stop="137316"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="139392" g_stop="138994" g_length="399"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="400" r_length="400" r_score="0.867"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="138993" i_stop="138325" i_length="669">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.994" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="138324" g_stop="138103" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="401" r_stop="622" r_length="222" r_score="0.995"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="138102" i_stop="137886" i_length="217">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.926" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="137885" g_stop="137790" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="623" r_stop="717" r_length="95" r_score="0.990"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="137789" i_stop="137692" i_length="98">
            <donor d_prob="0.983" d_score="0.98"/>
            <acceptor a_prob="0.487" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="137691" g_stop="137616" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="718" r_stop="793" r_length="76" r_score="0.961"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0127N23.1" gen_strand="-" ref_id="SGN-U566739" ref_strand="+">
        <total_alignment_score>0.927</total_alignment_score>
        <cumulative_length_of_scored_exons>793</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0127N23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U566739" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="139392" e_stop="138994"/>
          <exon e_start="138324" e_stop="138103"/>
          <exon e_start="137885" e_stop="137790"/>
          <exon e_start="137691" e_stop="137616"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATTAAATTATTCCTATTTTGCTCTGCACGTTATATGAGTCTTCTTTAATTTATCAATTTTCCTACAACTATTATTACTACATTATTTTTTAATCAATCCAACAAACAAAACATTATAATTTTTTTATTTTTTTTTAATAATAAAAATAATATTGAATGCTCTTGTTCTTCTTCCTCCTCCTCCAACATTCTTCTAATAATTTCTATTATTTTATTGTTTTCATTCACCGTTTTTTTGCGTCAGCAGAT-A-A-----------T--ATTGTCAAAGTTGACCTGGTAAAATCATTTTTGTGTTTTTTTTCAATATTGTATAAAACTTGGTATTTCTCATTAGAAATGGCCATTGGAGCATGCTTTGGTGTGCCTCCTTTCTTTTCACGCAGGAAGCATACTACAACCTATCAGGTTTTTTCATTTTCTCTTAAATCTTTTGTTTATTTAACATGTTATGATCATCTTAAAAAGAATGTAAATTTATCTTAATTATGCATTTCTCAATATTTGAAATAAAACAAAACACACAATTAATCTATTTCTCCTCATAAAAGGTTTTGAATTTGATAACATATGATAAATCCTTAAGAAAACCTCAAAATGTTATGATCATATAAAAAAAATACAAATGTTCTGTTAATTTGTGCATGAAAAATCCTAAATATACCAAAAGGTTAAATTCTACATTATATTTATCAGAATCATATTCCATGCAGATTTCTCCCAATATTTCCTTTTTGACTCTATCTTCCATGTGTTTTTAAAGAAAAAAACTAGTGATTAATGAATTGCATCATATGATGAAACAGATTAAGAAGAGAAGGAAAAAAAAAGATTTAAGAGGGGAAGGTTGCATACAACAATAAGGTGATATAAAAAACCAGTTTTTGCTTAAGGAACAAAACAGCCCATGCATGCATATAATGATATTTGACAAAAACTTGAGAAAGAAATGTGGACAGATTGACTATGTATCTTGTTATATATGTGAATTATAATCTAAGAGCCAAGAAACCGAGAAACCGGTGACTTGGATATTATAATAGCATATTACTGATAGTAGTTGACAAACATTTGCAGGAAGAAGAGATGAAAGAGACAAAGAGAAGTCCTGTTGTTGAAAAGAAGAAAACACCTCCCATAGCAGTATCAAAAAGTTTTAAATCCAAAGGTTCCACGGTTCGTAATTCATCTAGAGTAGCAGGGAACTTCATAATAATGACTGAGCTTCGGAACAAGATCCTTACCTTGAGAGACTTGCTCGACTTGTCCCCTTGTATTGGCTCTGCATCTGTAAATGAGGTACATTTCTGTTATTTGTCTTTAGAACAGAAGACCAATCATATCAATCCGTAAAGAGTTTTAACTTGTATAAATGAATTGTACACCATCAGTATATTCAAAATGGTTATAGAAGGTTACTTAAACGCAATGTCAGTGTATAGAAGTTAAAACTCTGCAATAAAAAGAGCAAAGCAGAATTTTGTAACCTCTGTGGTGAATTCTTTTTTTTCCACAGCTGCTGCTTTTGACGCTGAAAGACCTGCAACAACTGTATCCTACAATGAATCCATCTATTTCTTTGTCAAAAATTGATGAAGCACCGATGCAGCAGGTTACTATTTACTCAGCTGTACTGAGTATTTACAAATTGAATGTTTGGGTATAGCGGATACACAGTTCACTGTGCTAACCAATTGTTATATTTCTCAGGCACTGCAATTCTTCTTTGATACTCTGATATCAATTGGGGAAATGTGGACAGGCAATGATGAGTGGATGGTCAAAT</genome_strand>
        <mrna_strand>GATT-AATTATTCCTATTTTGCTCTGCACGTTATATGAGTCTTCTTTAATTTATCAATTTTCCTACAACTATTACTA--ACATTATTTTTTAATCAATCCAACAAAC-AAACATTATAA--TTTTTA-TTTTTTTT-ATAAT---AAT---ATTGAATGCTTTTGTTCTTCTTCCTCCTCCTCCAACATTCTTTTAATAATTTCTATTATTCTATTGCTTTCATTCACCGGTTTTTTGCGTCAGCAGATAATATTTCTGTTTTTTCAATTGTCAAAGTTGACCTGGTAAATTCATTTTTGTGTTTTTTTTCAATATTGTATAAAACTTGGTATTTCTCATTAGAAATGGCCATTGGAGCATGCTTTGGTGTGCCTCCTTTCTTTTCACGCAGGAAGCATACTACAACATATCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAAGAGATGAAAGAGACAAAGAGAAGTCCTGTTGTAGAAAAGAAGAAAACACCTCCCATAGCAGTATCAAAAAGTTTTAAATCCAAAGGTTCCACGGTTCGTAATTCATCTAGAGTAGCAGGGAACTTCATAATAATGACTGAGCTTCGGAACAAGATCCTTACCTTGAGAGACTTGCTCGACTTGTCCCCTTGTATTGGCTCTGCATCTGTAAATGAG.........................................................................................................................................................................................................................CTGCTGCTTTTGACGCTGAAAGACCTGCAACAACTGTATCCTACAATGAATCCATCTATTTCTTTGTCAAAAA-TGATGAAGCACCGATGCAGCAG..................................................................................................GCACTGCAATTCTTCTTTGATACTCTGATATCAATTGGGGGAATGTGGACAGGGCATGATGAGTGGATGGTCAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U571158" ref_strand="-" ref_description="SGN-U571158 Tomato 200607#2 [5 ESTs aligned] ">
      <seq>aaccagaattgatttttcagattgaagcttctttcattcaagttgataaaaaatcttctgcagttgaggcaaaacctcctcctactgaagaaactgttcctgtgaaaggtaaaagcccaactaagaaggacagtcttgcaaagaccggaaaagatgcaaggtctaaagtctccccaggatctctgtcaaggagcaggattgatgctttagcaaagagcaagaagatgtctcctcctactaacaaactgacaacccagaagagcaaattagatcgggacgaagaaatgcgcaagagaatggaagaattagtgatcgagaggcaaaagaggattgcagaaagaagtgcagctaagggttcgtccccagcagcttccaagaaagggccagcaggaagtaaaacagcttcaaagatctcaccttcatccaaacttcacacatttccagtgcaggtcaagcattaaggagcaatccatcaaggaaaagtatgatccgaccttaaaatatatttgattgctttgccgcgaatatggaacatccacaattcactgctttgtgcacattggattatccacaaatatatcttggagaaataaaatattttcgatgaaaattatagatttttttctttactaggacagctctgcttgctggcttgatgcaagttattccttctcatttatttagacattcatgtcccatcataaggttttgccagtatagttgcttgaggctttattattatttgtatattgctatttgttcatatgttgtgtaaagttatatttaaatctacctgtgagttaaaacttctattccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0127N23.1" temp_strand="-" temp_description="C02SLm0127N23.1  AC232778.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0127N23 sequenced_by:kribb upload_account_name:korea">
        <position start="142624" stop="141114"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="142324" g_stop="142050" g_length="275"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="275" r_length="275" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="142049" i_stop="141956" i_length="94">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="141955" g_stop="141414" g_length="542"/>
          <reference_exon_boundary r_type="cDNA" r_start="276" r_stop="817" r_length="542" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0127N23.1" gen_strand="-" ref_id="SGN-U571158" ref_strand="-">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>817</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0127N23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U571158" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="142324" e_stop="142050"/>
          <exon e_start="141955" e_stop="141414"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACCAGAATTGGATTTTCAGATTGAAGCTTCTTTCATTCAAGTTGATAAAAAATCTTCTGCAGTTGAGGCAAAACCTCCTCCTACTGAAGAAACTGTTCCTGTGAAAGGTAAAAGCACAACTAAGAAGGACAGTCTTGCAAAGACCGGAAAAGATGCAAGGTCTAAAGTCTCCCCAGGATCTCTGTCAAGGAGCAGGATTGATGCTTTAGCAAAGAGCAAGAAGATGTCTCCTCCTACTAACAAACTGACAACCCAGAAGAGCAAATTAGATCGGGTACGACAATAACCAGTAACCTCATTTTCCCATTGTTTTTGCCTCCATTATTTTTGTCTTTCTTATAAATCATACTTCCTCATTGTTTAAATAGGACGAAGAAATGCGCAAGAGAATGGAAGAATTAGTGATCGAGAGGCAAAAGAGGATTGCAGAAAGAAGTGCAGCTAAGGGTTCGTCCCCAGCAGCTTCCAAGAAAGGGCCAGCAGGAAGTAAAACAGCTTCAAAGATCTCACCTTCATCCAAACTTCACACATTTCCAGTGCAGGTCAAGCATTAAGGAGCAATCCATCAAGGAAAAGTATGATCCGACCTTAAAATATATTTGATTGCTTTGCCGCGAATATGGAACATCCACAATTCACTGCTTTGTGCACATTGGATTATCCACAAATATATCTTGGAGAAATAAAATATTTTCGATGAAAATTATAGATTTTTTTCTTTACTAGGACAGCTCTGCTTGCTGGCTTGATGCAAGTTATTCCTTCTCATTTATTTAGACATTCATGTCCCATCATAAGGTTTTGCCAGTATAGTTGCTTGAGGCTTTATTATTATTTGTATATTGCTATTTGTTCATATGTTGTGTAAAGTTATATTTAAATCTACCTGTGAGTTAAAACTTCTAATACC</genome_strand>
        <mrna_strand>AACCAGAATTGATTTTTCAGATTGAAGCTTCTTTCATTCAAGTTGATAAAAAATCTTCTGCAGTTGAGGCAAAACCTCCTCCTACTGAAGAAACTGTTCCTGTGAAAGGTAAAAGCCCAACTAAGAAGGACAGTCTTGCAAAGACCGGAAAAGATGCAAGGTCTAAAGTCTCCCCAGGATCTCTGTCAAGGAGCAGGATTGATGCTTTAGCAAAGAGCAAGAAGATGTCTCCTCCTACTAACAAACTGACAACCCAGAAGAGCAAATTAGATCGG..............................................................................................GACGAAGAAATGCGCAAGAGAATGGAAGAATTAGTGATCGAGAGGCAAAAGAGGATTGCAGAAAGAAGTGCAGCTAAGGGTTCGTCCCCAGCAGCTTCCAAGAAAGGGCCAGCAGGAAGTAAAACAGCTTCAAAGATCTCACCTTCATCCAAACTTCACACATTTCCAGTGCAGGTCAAGCATTAAGGAGCAATCCATCAAGGAAAAGTATGATCCGACCTTAAAATATATTTGATTGCTTTGCCGCGAATATGGAACATCCACAATTCACTGCTTTGTGCACATTGGATTATCCACAAATATATCTTGGAGAAATAAAATATTTTCGATGAAAATTATAGATTTTTTTCTTTACTAGGACAGCTCTGCTTGCTGGCTTGATGCAAGTTATTCCTTCTCATTTATTTAGACATTCATGTCCCATCATAAGGTTTTGCCAGTATAGTTGCTTGAGGCTTTATTATTATTTGTATATTGCTATTTGTTCATATGTTGTGTAAAGTTATATTTAAATCTACCTGTGAGTTAAAACTTCTATTCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U571157" ref_strand="+" ref_description="SGN-U571157 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|157328895|emb|CAO23304.1| (e_value=7e-38) unnamed; (*ATH) AT4G27430.1 (e_value=3e-12) | Symbol: None | COP1-interacting protein 7 (CIP7), identical to COP1-Interacting Protein 7 (CIP7) GI:3327868 from (Arabidopsis thaliana) | chr4:13718685-13722984 FORWARD | Aliases: F27G19.30, F27G19_30; ">
      <seq>gggagccaagtatgaatgggaccagtgaccagctacctttggacttccaggatgaaggctatgggatcaagaattctggtgagaaggtcagaagagaccatctgacacctgatgattctcttatgagcaaaaatcatgaagataatggcacaaaggttaacatggtagattttgccaatggtgaggatatgaggccaagtttgaagaaaggagtttctgaagatgtgcatcttctattttcgcacaaagaaccatcaggaggcaatacattgggaactccatctgattttggttctgaatcctctgctattagaaatagtaatggggaagattggtttgttgtcaaccactccggcagttcagaaactcaagagactaggcgaatgatatttgacaatgacagtagcatgtcaactcagaaaagttcctctcaagtcgaaagtgaaagagctgctcctattgatgattctttcatggtacagtctcgaccagcttttgatgatcaatatggttctcagtggaaaacagacattggcatggatgcagacttggttgctgcagcaaatgctgaaaatagtgatccagttgcatcaaaaaccaagcttagtacatatgggaccagtcaacctgatgacctctgtgtggtgctggcaagagaaactagtttggatcctcttgaggcatcttggcaaccagaattggattttcagaatgaagcttctttcattcaagttgataaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0127N23.1" temp_strand="-" temp_description="C02SLm0127N23.1  AC232778.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0127N23 sequenced_by:kribb upload_account_name:korea">
        <position start="143313" stop="141972"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="143014" g_stop="142272" g_length="743"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="743" r_length="743" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0127N23.1" gen_strand="-" ref_id="SGN-U571157" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>743</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0127N23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U571157" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="143014" e_stop="142272"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGAGCCAAGTATGAATGGGACCAGTGACCAGCTACCTTTGGACTTCCAGGATGAAGGCTATGGGATCAAGAATTCTGGTGAGAAGGTCAGAAGAGACCATCTGACACCTGATGATTCTCTTATGAGCAAAAATCATGAAGATAATGGCACAAAGGTTAACATGGTAGATTTTGCCAATGGTGAGGATATGAGGCCAAGTTTGAAGAAAGGAGTTTCTGAAGATGTGCATCTTCTATTTTCGCACAAAGAACCATCAGGAGGCAATACATTGGGAACTCCATCTGATTTTGGTTCTGAATCCTCTGCTATTAGAAATAGTAATGGGGAAGATTGGTTTGTTGTCAACCACTCCGGCAGTTCAGAAACTCAAGAGACTAGGCGAATGATATTTGACAATGACAGTAGCATGTCAACTCAGAAAAGTTCCTCTCAAGTCGAAAGTGAAAGAGCTGCTCCTATTGATGATTCTTTCATGGTACAGTCTCGACCAGCTTTTGATGATCAATATGGTTCTCAGTGGAAAACAGACATTGGCATGGATGCAGACTTGGTTGCTGCAGCAAATGCTGAAAATAGTGATCCAGTTGCATCAAAAACCAAGCTTAGTACATATGGGACCAGTCAACCTGATGACCTCTGTGTGGTGCTGGCAAGAGAAACTAGTTTGGATCCTCTTGAGGCATCTTGGCAACCAGAATTGGATTTTCAGATTGAAGCTTCTTTCATTCAAGTTGATAAAAAA</genome_strand>
        <mrna_strand>GGGAGCCAAGTATGAATGGGACCAGTGACCAGCTACCTTTGGACTTCCAGGATGAAGGCTATGGGATCAAGAATTCTGGTGAGAAGGTCAGAAGAGACCATCTGACACCTGATGATTCTCTTATGAGCAAAAATCATGAAGATAATGGCACAAAGGTTAACATGGTAGATTTTGCCAATGGTGAGGATATGAGGCCAAGTTTGAAGAAAGGAGTTTCTGAAGATGTGCATCTTCTATTTTCGCACAAAGAACCATCAGGAGGCAATACATTGGGAACTCCATCTGATTTTGGTTCTGAATCCTCTGCTATTAGAAATAGTAATGGGGAAGATTGGTTTGTTGTCAACCACTCCGGCAGTTCAGAAACTCAAGAGACTAGGCGAATGATATTTGACAATGACAGTAGCATGTCAACTCAGAAAAGTTCCTCTCAAGTCGAAAGTGAAAGAGCTGCTCCTATTGATGATTCTTTCATGGTACAGTCTCGACCAGCTTTTGATGATCAATATGGTTCTCAGTGGAAAACAGACATTGGCATGGATGCAGACTTGGTTGCTGCAGCAAATGCTGAAAATAGTGATCCAGTTGCATCAAAAACCAAGCTTAGTACATATGGGACCAGTCAACCTGATGACCTCTGTGTGGTGCTGGCAAGAGAAACTAGTTTGGATCCTCTTGAGGCATCTTGGCAACCAGAATTGGATTTTCAGAATGAAGCTTCTTTCATTCAAGTTGATAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U566503" ref_strand="+" ref_description="SGN-U566503 Tomato 200607#2 [2 ESTs aligned] ">
      <seq>aggcaaaatgtaaatggctccacaaatggttctgttagggactctcacaaacggtcaaagaagaaggagaaatccaaagaacataacagttcacaagatgatgaacagactgagtcgagtgcctctgattctggaactgattcaaatgaagttaggaagcatgagaaaaagcattcttcaagggagaactcacatgctaaaaagcacaagaagaaatcctcaaaaacagttgtaatccgcaacatcaattatatcacttccaatagaaagaatgaggaaaatgatggatcttcttatgattcatcttcagctgaatctcatttactcgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0127N23.1" temp_strand="-" temp_description="C02SLm0127N23.1  AC232778.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0127N23 sequenced_by:kribb upload_account_name:korea">
        <position start="143870" stop="142943"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="143573" g_stop="143243" g_length="331"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="331" r_length="331" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0127N23.1" gen_strand="-" ref_id="SGN-U566503" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>331</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0127N23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U566503" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="143573" e_stop="143243"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCACAAAATGTAAATGGCTCCACAAATGGTTCTGTTAGGGACTCTCACAAACGCTCAAAGAAGAAGGAGAAATCCAAAGAACATAACAGTTCAGAAGATGATGAACAGACTGAGTCGAGTGCCTCTGATTCTGGAACTGATTCAGATGAAGTTAGGAAGCATGAGAAAAAGCATTCTTCAAGGGAGAACTCACATGCTAAAAAGCACAAGAAGAAATCCTCAAAAAGAGTTGTAATCCGCAACATCAATTATATCACTTCCAATAGAAAGAATGAGGAAAATGATGGATCTTCTTATGATTCATCTTCAGCTGAATCTCATTTACTCGATG</genome_strand>
        <mrna_strand>AGGCAAAATGTAAATGGCTCCACAAATGGTTCTGTTAGGGACTCTCACAAACGGTCAAAGAAGAAGGAGAAATCCAAAGAACATAACAGTTCACAAGATGATGAACAGACTGAGTCGAGTGCCTCTGATTCTGGAACTGATTCAAATGAAGTTAGGAAGCATGAGAAAAAGCATTCTTCAAGGGAGAACTCACATGCTAAAAAGCACAAGAAGAAATCCTCAAAAACAGTTGTAATCCGCAACATCAATTATATCACTTCCAATAGAAAGAATGAGGAAAATGATGGATCTTCTTATGATTCATCTTCAGCTGAATCTCATTTACTCGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U563119" ref_strand="+" ref_description="SGN-U563119 Tomato 200607#2 [10 ESTs aligned] (*GB) gi|157328895|emb|CAO23304.1| (e_value=1e-74) unnamed; (*ATH) AT1G61100.1 (e_value=1e-74) | Symbol: None | disease resistance protein (TIR class), putative, domain signature TIR exists, suggestive of a disease resistance protein. | chr1:22512203-22515936 REVERSE | Aliases: F11P17.17, F11P17_17; ">
      <seq>attgcttcatcatttcttgctggcaatttttcttccatttacagttcaacaaaaagatttctcaaatgtcacgttcttgaacatgtctttgttctttacaaccatttcttttgctatttgagtttcattttttcaccattttctcccctttgtccactaagctttgctttagttaaacatggattccaagacccttcttgattatgcactgtttcagctcaccccaactagaacaagatgtgatcttgtggtgttttctgggggtaaaaatgagaaattggcatctgggttggtggaaccattcatttctcacttgaaatttgctaaagatcagattccaaaaggtgggtattcaatcactatgaggccaccttcaactcatgcctactggttcaccaaagccacattcctaagatttgtacgctttgttagtacacctgaaattcttgagaggtttatgcgattggaacgagagatctcacagatcgagagttccattcaatccaatgaatgctccaatggcaattcagaggaaggaagctcaccagctaatagtgagagcaccaggaaatcaaacgattcgttcaaggcaaaatctgaagttgaagaagctaataatgctgcacctaaagaaaactccaagattcaccttcaacgccacctggatacccgaaaggcattacttaggaaagagcaggccatggcttatgcgcgtgcaaccgttgcaggctttgagatagaccaattggatgatctcatacagtttgctaattcttttggtgcagtacgtcttagggatgcatgtgtagatttcaaggaactttacaaacaaaagcacacagatggacaatggatggatgaggtagctgcaatgaaggcatgtacaccaatggatctatcgtacttgggaaatcaaggtgttattcttgcatatgacaataatggctctttgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0127N23.1" temp_strand="-" temp_description="C02SLm0127N23.1  AC232778.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0127N23 sequenced_by:kribb upload_account_name:korea">
        <position start="146713" stop="143783"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="146413" g_stop="146177" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="237" r_length="237" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="146176" i_stop="146039" i_length="138">
            <donor d_prob="0.832" d_score="1.00"/>
            <acceptor a_prob="0.941" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="146038" g_stop="145862" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="238" r_stop="414" r_length="177" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="145861" i_stop="145471" i_length="391">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="145470" g_stop="145349" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="415" r_stop="536" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="145348" i_stop="145194" i_length="155">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="145193" g_stop="145141" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="537" r_stop="589" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="145140" i_stop="145048" i_length="93">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="145047" g_stop="144995" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="590" r_stop="642" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="144994" i_stop="144905" i_length="90">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="144904" g_stop="144752" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="643" r_stop="795" r_length="153" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="144751" i_stop="144241" i_length="511">
            <donor d_prob="0.895" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="144240" g_stop="144083" g_length="158"/>
          <reference_exon_boundary r_type="cDNA" r_start="796" r_stop="953" r_length="158" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0127N23.1" gen_strand="-" ref_id="SGN-U563119" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>953</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0127N23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U563119" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="146413" e_stop="146177"/>
          <exon e_start="146038" e_stop="145862"/>
          <exon e_start="145470" e_stop="145349"/>
          <exon e_start="145193" e_stop="145141"/>
          <exon e_start="145047" e_stop="144995"/>
          <exon e_start="144904" e_stop="144752"/>
          <exon e_start="144240" e_stop="144083"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTGCTTCATCATTTCTTGCTGGCAATTTTTCTTCCATTTACAGTTCAACAAAAAGATTTCTCAAATGTCACGTTCTTGAACATGTCTTTGTTCTTTACAACCATTTCTTTTGCTATTTGAGTTTCATTTTTTCACCATTTTCTCCCCTTTGTCCACTAAGCTTTGCTTTAGTTAAACATGGATTCCAAGACCCTTCTTGATTATGCACTGTTTCAGCTCACCCCAACTAGAACAAGGTTGGTTTTGCTTTAAACACCCCCCCCCCCCCTCTCCACACAAAGTTTGTGTTAACTGTTTTTTTAGCTTTGTATTGTGATGGAAACTGATAAAGATTTGATTTTTTGTGTGTTTTTGATTTGTGGGTATTGAAAAAGATGTGATCTTGTGGTGTTTTCTGGGGGTAAAAATGAGAAATTGGCATCTGGGTTGGTGGAACCATTCATTTCTCACTTGAAATTTGCTAAAGATCAGATTCCAAAAGGTGGGTATTCAATCACTATGAGGCCACCTTCAACTCATGCCTACTGGTTCACCAAAGCCACATTCCTAAGGTATAATTTTTGTTTGATCTTTGAAAAGTTTCAAGCTTTTAGTAATTTTGTCATTGTTCATTAGTACCAACATGTTACTTGCAGATGATCTTGATGGTGAAATTGGTCATAAAGCATCACTAGATTGTGATTATTATGGGTTAAAAATGTAGACTAAATGTGTATAGACTTTTTGCTAATAACTTCTAACCAGATATAATTGCTCATTGGACATCTTGGAAACAGGGTAGTGTTGTTTTAGCATAATTAGTGTTCTTTTGCATTTTAGAAGTTATTCTCTAGTTGCAAACTGTTAGAATAATGGATTCTTGTTGGATCTAGCATAAATGTGAAGCTGATGCAATGGTAGACTCGATTTTATTTACCTGTGGTTTCTTTGTGTTTGTGGCAGATTTGTACGCTTTGTTAGTACACCTGAAATTCTTGAGAGGTTTATGCGATTGGAACGAGAGATCTCACAGATCGAGAGTTCCATTCAATCCAATGAATGCTCCAATGGCAATTCAGAGGAAGGTATGTTCAAGACATCAAATTAGATACCCATTGTCCATTAGATTTAATTCTAGATTTCTTCTTTTTATGATAATAACATTTGTAGTTTTGTTTCTTAGTAGAGTTCATACCATTTTGAGATTGGGGCTAATGTACATTTGTTGCTTGACTTGCAGGAAGCTCACCAGCTAATAGTGAGAGCACCAGGAAATCAAACGATTCGTTCAAGGTATTTTACTTGATCACAGTTAGATTTTTGGCTAGTGATTTCCATTTAGTCTAGTAGCTCATTATAAAATTTCGCTTTGATTGGTTTTTCTAGGCAAAATCTGAAGTTGAAGAAGCTAATAATGCTGCACCTAAAGAAAACTCCAAGTAAGTTTTCTTCCCTTGGAAGCAACAGTGAATTGTAAATGCATCTCCACGAGAGAATCTTACTGAGTTATTTGTTTTTTATCATTTCAGGATTCACCTTCAACGCCACCTGGATACCCGAAAGGCATTACTTAGGAAAGAGCAGGCCATGGCTTATGCGCGTGCAACCGTTGCAGGCTTTGAGATAGACCAATTGGATGATCTCATACAGTTTGCTAATTCTTTTGGTGCAGTACGTCTTAGGTATGATACAGTAAAGTGTCTCCATCATAACCTATGTTTTGTAGCTTAGGTATATAGATAAAGAAAAACAACTGGTGTAAAATGAATCACCAATGTTTGTCTTTGACTACTTTAGTTGGAAGAAACATTTATGGCAGGTTCCAATTATCATTGTGAACCTTTGTTTCCATTCTGGTGCATAGCTGAAAACACAGTCTGGAGGACATCTGCTGTCTAACAATCGAAGAAATCATCACATCGTTATGTTTATCCTTGTTTTAATGTCTGTTACTCTTCTATTTGCTGTAAGGTAAATTGTACACTTGTCCATTTTATATTGATTTTTGAAGGAAGCCTTTCCTACATATGGAACTAGAGAACTCCTAGGTGTAGCTTTTGACGATGATATAATAACAAGCTTCTACGTCTTTCACTGTATACATAGTACTATTAGGGAGATGTCAAAATTGAGTCAACTGTTATAATTCCATTTTTTGTAACTTCAGTTTGTGTGATCTTATCTTTCTTGTAGGGATGCATGTGTAGATTTCAAGGAACTTTACAAACAAAAGCACACAGATGGACAATGGATGGATGAGGTAGCTGCAATGAAGGCATGTACACCAATGGATCTATCGTACTTGGGAAATCAAGGTGTTATTCTTGCATATGACAATAATGGCTCTTTGG</genome_strand>
        <mrna_strand>ATTGCTTCATCATTTCTTGCTGGCAATTTTTCTTCCATTTACAGTTCAACAAAAAGATTTCTCAAATGTCACGTTCTTGAACATGTCTTTGTTCTTTACAACCATTTCTTTTGCTATTTGAGTTTCATTTTTTCACCATTTTCTCCCCTTTGTCCACTAAGCTTTGCTTTAGTTAAACATGGATTCCAAGACCCTTCTTGATTATGCACTGTTTCAGCTCACCCCAACTAGAACAAG..........................................................................................................................................ATGTGATCTTGTGGTGTTTTCTGGGGGTAAAAATGAGAAATTGGCATCTGGGTTGGTGGAACCATTCATTTCTCACTTGAAATTTGCTAAAGATCAGATTCCAAAAGGTGGGTATTCAATCACTATGAGGCCACCTTCAACTCATGCCTACTGGTTCACCAAAGCCACATTCCTAAG.......................................................................................................................................................................................................................................................................................................................................................................................................ATTTGTACGCTTTGTTAGTACACCTGAAATTCTTGAGAGGTTTATGCGATTGGAACGAGAGATCTCACAGATCGAGAGTTCCATTCAATCCAATGAATGCTCCAATGGCAATTCAGAGGAAG...........................................................................................................................................................GAAGCTCACCAGCTAATAGTGAGAGCACCAGGAAATCAAACGATTCGTTCAAG.............................................................................................GCAAAATCTGAAGTTGAAGAAGCTAATAATGCTGCACCTAAAGAAAACTCCAA..........................................................................................GATTCACCTTCAACGCCACCTGGATACCCGAAAGGCATTACTTAGGAAAGAGCAGGCCATGGCTTATGCGCGTGCAACCGTTGCAGGCTTTGAGATAGACCAATTGGATGATCTCATACAGTTTGCTAATTCTTTTGGTGCAGTACGTCTTAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATGCATGTGTAGATTTCAAGGAACTTTACAAACAAAAGCACACAGATGGACAATGGATGGATGAGGTAGCTGCAATGAAGGCATGTACACCAATGGATCTATCGTACTTGGGAAATCAAGGTGTTATTCTTGCATATGACAATAATGGCTCTTTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U589069" ref_strand="+" ref_description="SGN-U589069 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157338192|emb|CAO39236.1| (e_value=6e-48) unnamed; (*ATH) AT1G61100.1 (e_value=8e-50) | Symbol: None | disease resistance protein (TIR class), putative, domain signature TIR exists, suggestive of a disease resistance protein. | chr1:22512203-22515936 REVERSE | Aliases: F11P17.17, F11P17_17; ">
      <seq>ccctcttaatgtgcaattcttgccattgcttcatcatttcttgctggcaatttttcttccatttacagttcaacaaaaagatttctcaaatgtcacgttcttgaacatgtctttgttctttacaaccatttcttttgctatttgagtttcattttttcaccattttctcccctttgtccactaagctttgctttagttaaacatggattccaagacccttcttgattatgcactgtttcagctcaccccaactagaacaagatgtgatcttgtggtgttttctgggggtaaaaatgagaaattggcatctgggttggtggaaccattcatttctcacttgaaatttgctaaagatcagattccaaaaggtgggtattcaatcactatgaggccaccttcaactcatgcctactggttcaccaaagccacattcctaagatttgtacgctttgttagtacacctgaaattcttgagaggtttatgcgattggaacgagagatctcacagatcgagagttccattcaatccaatgaatgctccaatggcaattcagaggaaggaagctcaccagctaatagtgagagcaccaggaaatcaaacgattcgttcaaggcaaaatctgaagttgaagaagctaataatgctgcacctaaagaanactccaagattcaccttcaacgccacctggatacccgaaaggcattacttaggaaagagcaggccatggcttatgcgcgtgcaaccgttgcaggctttgagatagacccat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0127N23.1" temp_strand="-" temp_description="C02SLm0127N23.1  AC232778.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0127N23 sequenced_by:kribb upload_account_name:korea">
        <position start="146735" stop="144501"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="146437" g_stop="146177" g_length="261"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="261" r_length="261" r_score="0.985"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="146176" i_stop="146039" i_length="138">
            <donor d_prob="0.832" d_score="1.00"/>
            <acceptor a_prob="0.941" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="146038" g_stop="145862" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="262" r_stop="438" r_length="177" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="145861" i_stop="145471" i_length="391">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="145470" g_stop="145349" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="439" r_stop="560" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="145348" i_stop="145194" i_length="155">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="145193" g_stop="145141" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="561" r_stop="613" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="145140" i_stop="145048" i_length="93">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="145047" g_stop="144995" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="614" r_stop="666" r_length="53" r_score="0.981"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="144994" i_stop="144905" i_length="90">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="144904" g_stop="144801" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="667" r_stop="770" r_length="104" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0127N23.1" gen_strand="-" ref_id="SGN-U589069" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>770</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0127N23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U589069" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="146437" e_stop="146177"/>
          <exon e_start="146038" e_stop="145862"/>
          <exon e_start="145470" e_stop="145349"/>
          <exon e_start="145193" e_stop="145141"/>
          <exon e_start="145047" e_stop="144995"/>
          <exon e_start="144904" e_stop="144801"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTCTCCATGTGCAATTCTTGCCATTGCTTCATCATTTCTTGCTGGCAATTTTTCTTCCATTTACAGTTCAACAAAAAGATTTCTCAAATGTCACGTTCTTGAACATGTCTTTGTTCTTTACAACCATTTCTTTTGCTATTTGAGTTTCATTTTTTCACCATTTTCTCCCCTTTGTCCACTAAGCTTTGCTTTAGTTAAACATGGATTCCAAGACCCTTCTTGATTATGCACTGTTTCAGCTCACCCCAACTAGAACAAGGTTGGTTTTGCTTTAAACACCCCCCCCCCCCCTCTCCACACAAAGTTTGTGTTAACTGTTTTTTTAGCTTTGTATTGTGATGGAAACTGATAAAGATTTGATTTTTTGTGTGTTTTTGATTTGTGGGTATTGAAAAAGATGTGATCTTGTGGTGTTTTCTGGGGGTAAAAATGAGAAATTGGCATCTGGGTTGGTGGAACCATTCATTTCTCACTTGAAATTTGCTAAAGATCAGATTCCAAAAGGTGGGTATTCAATCACTATGAGGCCACCTTCAACTCATGCCTACTGGTTCACCAAAGCCACATTCCTAAGGTATAATTTTTGTTTGATCTTTGAAAAGTTTCAAGCTTTTAGTAATTTTGTCATTGTTCATTAGTACCAACATGTTACTTGCAGATGATCTTGATGGTGAAATTGGTCATAAAGCATCACTAGATTGTGATTATTATGGGTTAAAAATGTAGACTAAATGTGTATAGACTTTTTGCTAATAACTTCTAACCAGATATAATTGCTCATTGGACATCTTGGAAACAGGGTAGTGTTGTTTTAGCATAATTAGTGTTCTTTTGCATTTTAGAAGTTATTCTCTAGTTGCAAACTGTTAGAATAATGGATTCTTGTTGGATCTAGCATAAATGTGAAGCTGATGCAATGGTAGACTCGATTTTATTTACCTGTGGTTTCTTTGTGTTTGTGGCAGATTTGTACGCTTTGTTAGTACACCTGAAATTCTTGAGAGGTTTATGCGATTGGAACGAGAGATCTCACAGATCGAGAGTTCCATTCAATCCAATGAATGCTCCAATGGCAATTCAGAGGAAGGTATGTTCAAGACATCAAATTAGATACCCATTGTCCATTAGATTTAATTCTAGATTTCTTCTTTTTATGATAATAACATTTGTAGTTTTGTTTCTTAGTAGAGTTCATACCATTTTGAGATTGGGGCTAATGTACATTTGTTGCTTGACTTGCAGGAAGCTCACCAGCTAATAGTGAGAGCACCAGGAAATCAAACGATTCGTTCAAGGTATTTTACTTGATCACAGTTAGATTTTTGGCTAGTGATTTCCATTTAGTCTAGTAGCTCATTATAAAATTTCGCTTTGATTGGTTTTTCTAGGCAAAATCTGAAGTTGAAGAAGCTAATAATGCTGCACCTAAAGAAAACTCCAAGTAAGTTTTCTTCCCTTGGAAGCAACAGTGAATTGTAAATGCATCTCCACGAGAGAATCTTACTGAGTTATTTGTTTTTTATCATTTCAGGATTCACCTTCAACGCCACCTGGATACCCGAAAGGCATTACTTAGGAAAGAGCAGGCCATGGCTTATGCGCGTGCAACCGTTGCAGGCTTTGAGATAGACCAAT</genome_strand>
        <mrna_strand>CCCTCTTAATGTGCAATTCTTGCCATTGCTTCATCATTTCTTGCTGGCAATTTTTCTTCCATTTACAGTTCAACAAAAAGATTTCTCAAATGTCACGTTCTTGAACATGTCTTTGTTCTTTACAACCATTTCTTTTGCTATTTGAGTTTCATTTTTTCACCATTTTCTCCCCTTTGTCCACTAAGCTTTGCTTTAGTTAAACATGGATTCCAAGACCCTTCTTGATTATGCACTGTTTCAGCTCACCCCAACTAGAACAAG..........................................................................................................................................ATGTGATCTTGTGGTGTTTTCTGGGGGTAAAAATGAGAAATTGGCATCTGGGTTGGTGGAACCATTCATTTCTCACTTGAAATTTGCTAAAGATCAGATTCCAAAAGGTGGGTATTCAATCACTATGAGGCCACCTTCAACTCATGCCTACTGGTTCACCAAAGCCACATTCCTAAG.......................................................................................................................................................................................................................................................................................................................................................................................................ATTTGTACGCTTTGTTAGTACACCTGAAATTCTTGAGAGGTTTATGCGATTGGAACGAGAGATCTCACAGATCGAGAGTTCCATTCAATCCAATGAATGCTCCAATGGCAATTCAGAGGAAG...........................................................................................................................................................GAAGCTCACCAGCTAATAGTGAGAGCACCAGGAAATCAAACGATTCGTTCAAG.............................................................................................GCAAAATCTGAAGTTGAAGAAGCTAATAATGCTGCACCTAAAGAANACTCCAA..........................................................................................GATTCACCTTCAACGCCACCTGGATACCCGAAAGGCATTACTTAGGAAAGAGCAGGCCATGGCTTATGCGCGTGCAACCGTTGCAGGCTTTGAGATAGACCCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U589068" ref_strand="+" ref_description="SGN-U589068 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|147782246|emb|CAN69737.1| (e_value=7e-31) hypothetical; (*ATH) AT1G61100.1 (e_value=5e-32) | Symbol: None | disease resistance protein (TIR class), putative, domain signature TIR exists, suggestive of a disease resistance protein. | chr1:22512203-22515936 REVERSE | Aliases: F11P17.17, F11P17_17; ">
      <seq>gatttttcttccatttacagttcaacaaaaagatttctcaaatgtcacgttcttgaacatgtctttgttctttacaaccatttcttttgctatttgagtttcattttttcaccattttctcccctttgtccactaagctttgctttagttaaacatggattccaagacccttcttgattatgcactgtttcagctcaccccaactagaacaaggttggttttgctttaaacaccccccccccctctccacacaaagttggggttaactgtttttttagctttgtattgtgatggaaactgataaaaatttgattttttgtgtgtttttgatttgggggtattgaaaaaaatgtgatcttgtggggttttcggggggtaaaaatgaaaaattggcatctgggttgggggaaccattcatttctcacttgaaatttgctaaaaatcaaattccaaaaggtgggtattcaatcactatgaggccaccttcaactcatgcctactggttcaccaaagccacattcctaaaatttgtacgctttgttagtacacctgaaattcttgaaaggtttatgcgattggaacgagagatctcacagatcgagagttccattcaatccaatgaatgctccaatggcaattcaaaggaaggaagctcaccagctaatagtgagagcaccaggaaatcaaacgattcgttcaaggcaaaatctgaagttgaagaagctaataatgctgcacctaaagaaaactccaagattcaccttcaacgccacctggatacccaaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0127N23-nDHhj/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0127N23.1" temp_strand="-" temp_description="C02SLm0127N23.1  AC232778.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0127N23 sequenced_by:kribb upload_account_name:korea">
        <position start="146688" stop="144571"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="146389" g_stop="145862" g_length="528"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="526" r_length="526" r_score="0.972"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="145861" i_stop="145471" i_length="391">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.985" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="145470" g_stop="145349" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="527" r_stop="648" r_length="122" r_score="0.984"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="145348" i_stop="145194" i_length="155">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="145193" g_stop="145141" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="649" r_stop="701" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="145140" i_stop="145048" i_length="93">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="145047" g_stop="144995" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="702" r_stop="754" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="144994" i_stop="144905" i_length="90">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="144904" g_stop="144871" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="755" r_stop="788" r_length="34" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0127N23.1" gen_strand="-" ref_id="SGN-U589068" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>790</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0127N23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U589068" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="146389" e_stop="145862"/>
          <exon e_start="145470" e_stop="145349"/>
          <exon e_start="145193" e_stop="145141"/>
          <exon e_start="145047" e_stop="144995"/>
          <exon e_start="144904" e_stop="144871"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTTTTCTTCCATTTACAGTTCAACAAAAAGATTTCTCAAATGTCACGTTCTTGAACATGTCTTTGTTCTTTACAACCATTTCTTTTGCTATTTGAGTTTCATTTTTTCACCATTTTCTCCCCTTTGTCCACTAAGCTTTGCTTTAGTTAAACATGGATTCCAAGACCCTTCTTGATTATGCACTGTTTCAGCTCACCCCAACTAGAACAAGGTTGGTTTTGCTTTAAACACCCCCCCCCCCCCTCTCCACACAAAGTTTGTGTTAACTGTTTTTTTAGCTTTGTATTGTGATGGAAACTGATAAAGATTTGATTTTTTGTGTGTTTTTGATTTGTGGGTATTGAAAAAGATGTGATCTTGTGGTGTTTTCTGGGGGTAAAAATGAGAAATTGGCATCTGGGTTGGTGGAACCATTCATTTCTCACTTGAAATTTGCTAAAGATCAGATTCCAAAAGGTGGGTATTCAATCACTATGAGGCCACCTTCAACTCATGCCTACTGGTTCACCAAAGCCACATTCCTAAGGTATAATTTTTGTTTGATCTTTGAAAAGTTTCAAGCTTTTAGTAATTTTGTCATTGTTCATTAGTACCAACATGTTACTTGCAGATGATCTTGATGGTGAAATTGGTCATAAAGCATCACTAGATTGTGATTATTATGGGTTAAAAATGTAGACTAAATGTGTATAGACTTTTTGCTAATAACTTCTAACCAGATATAATTGCTCATTGGACATCTTGGAAACAGGGTAGTGTTGTTTTAGCATAATTAGTGTTCTTTTGCATTTTAGAAGTTATTCTCTAGTTGCAAACTGTTAGAATAATGGATTCTTGTTGGATCTAGCATAAATGTGAAGCTGATGCAATGGTAGACTCGATTTTATTTACCTGTGGTTTCTTTGTGTTTGTGGCAGATTTGTACGCTTTGTTAGTACACCTGAAATTCTTGAGAGGTTTATGCGATTGGAACGAGAGATCTCACAGATCGAGAGTTCCATTCAATCCAATGAATGCTCCAATGGCAATTCAGAGGAAGGTATGTTCAAGACATCAAATTAGATACCCATTGTCCATTAGATTTAATTCTAGATTTCTTCTTTTTATGATAATAACATTTGTAGTTTTGTTTCTTAGTAGAGTTCATACCATTTTGAGATTGGGGCTAATGTACATTTGTTGCTTGACTTGCAGGAAGCTCACCAGCTAATAGTGAGAGCACCAGGAAATCAAACGATTCGTTCAAGGTATTTTACTTGATCACAGTTAGATTTTTGGCTAGTGATTTCCATTTAGTCTAGTAGCTCATTATAAAATTTCGCTTTGATTGGTTTTTCTAGGCAAAATCTGAAGTTGAAGAAGCTAATAATGCTGCACCTAAAGAAAACTCCAAGTAAGTTTTCTTCCCTTGGAAGCAACAGTGAATTGTAAATGCATCTCCACGAGAGAATCTTACTGAGTTATTTGTTTTTTATCATTTCAGGATTCACCTTCAACGCCACCTGGATACCCGAAAG</genome_strand>
        <mrna_strand>GATTTTTCTTCCATTTACAGTTCAACAAAAAGATTTCTCAAATGTCACGTTCTTGAACATGTCTTTGTTCTTTACAACCATTTCTTTTGCTATTTGAGTTTCATTTTTTCACCATTTTCTCCCCTTTGTCCACTAAGCTTTGCTTTAGTTAAACATGGATTCCAAGACCCTTCTTGATTATGCACTGTTTCAGCTCACCCCAACTAGAACAAGGTTGGTTTTGCTTTAAACA--CCCCCCCCCCCTCTCCACACAAAGTTGGGGTTAACTGTTTTTTTAGCTTTGTATTGTGATGGAAACTGATAAAAATTTGATTTTTTGTGTGTTTTTGATTTGGGGGTATTGAAAAAAATGTGATCTTGTGGGGTTTTCGGGGGGTAAAAATGAAAAATTGGCATCTGGGTTGGGGGAACCATTCATTTCTCACTTGAAATTTGCTAAAAATCAAATTCCAAAAGGTGGGTATTCAATCACTATGAGGCCACCTTCAACTCATGCCTACTGGTTCACCAAAGCCACATTCCTAAA.......................................................................................................................................................................................................................................................................................................................................................................................................ATTTGTACGCTTTGTTAGTACACCTGAAATTCTTGAAAGGTTTATGCGATTGGAACGAGAGATCTCACAGATCGAGAGTTCCATTCAATCCAATGAATGCTCCAATGGCAATTCAAAGGAAG...........................................................................................................................................................GAAGCTCACCAGCTAATAGTGAGAGCACCAGGAAATCAAACGATTCGTTCAAG.............................................................................................GCAAAATCTGAAGTTGAAGAAGCTAATAATGCTGCACCTAAAGAAAACTCCAA..........................................................................................GATTCACCTTCAACGCCACCTGGATACCCAAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>32</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="8109" PGL_stop="10157"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="8109" e_stop="8131"/>
            <exon e_start="8980" e_stop="9128"/>
            <exon e_start="9313" e_stop="9425"/>
            <exon e_start="9684" e_stop="9894"/>
            <exon e_start="9976" e_stop="10157"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.981" e_score="1.000"/>
          <exon-intron don_prob="0.804" acc_prob="0.960" e_score="1.000"/>
          <exon-intron don_prob="0.938" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="0.989"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="8109" e_stop="8131" e_length="23"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.981">
            <gDNA_intron_boundary i_start="8132" i_stop="8979" i_length="848"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="8980" e_stop="9128" e_length="149"/>
          </exon>
          <intron i_serial="2" don_prob="0.804" acc_prob="0.960">
            <gDNA_intron_boundary i_start="9129" i_stop="9312" i_length="184"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="9313" e_stop="9425" e_length="113"/>
          </exon>
          <intron i_serial="3" don_prob="0.938" acc_prob="1.000">
            <gDNA_intron_boundary i_start="9426" i_stop="9683" i_length="258"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="9684" e_stop="9894" e_length="211"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.998">
            <gDNA_intron_boundary i_start="9895" i_stop="9975" i_length="81"/>
          </intron>
          <exon e_serial="5" e_score="0.989">
            <gDNA_exon_boundary e_start="9976" e_stop="10157" e_length="182"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8109" stop="8131"/>
              <exon start="8980" stop="9128"/>
              <exon start="9313" stop="9425"/>
              <exon start="9684" stop="9894"/>
              <exon start="9976" stop="10157"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U579557" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTGGTGTTCCCCTCCCAAAGCAG : TGTATTGGTGGTGAAGGCTAACATTTCATTTACTCATCAAAAGGCACTATCAATTGATTTAGACACGCTAATTGACATGAGTTGTTGCTTCTTTGGCGACCGGAAAAAGGGTCATGATCTCGTTCACCATGATACAAGAGATGCAGGAG : GTGACTCCATTGCAAGCACAAAGAATTTTTCATTTAATGAATTAAGATTAGCAACCAACAACTTCCATCAAATTAATAAAATAGGGCGAGGCGGTTTTGGCACAGTATACAAG : GGAACTCTAAAACAAGGAAAAGATGTTGCTGTGAAGACACTAGCAGCAGAATCAAGGCAGGGTTTGCGGGAGTTTTTGACAGAAATTGAGACAATATCAAATGTCAAACATCCAAATCTAGTTGAGATAATTGGATGCTGTGCTGATGGAAATAACCGGATTTTGGTCTATGAATATTTAGAAAATAGAAGCCTTGATCGGGCACTGTTTG : GTTCAAGGACTAGTATTAAGTTAGAATGGGAAAAAAGGACTACTATTTGCTTGGGTACTGCTCGAGGTCTTGCATATCTACATGAAGAACTAGTGCCACATATAGTGCACAGGGATATAAAAGCTAGTAATATTCTGCTTGACAAGGATTATACACCAAAAATTGGAGATTTTGGGCTTGCT</gDNA_template>
            <first_frame> L  V  F  P  S  Q  S  S :   V  L  V  V  K  A  N  I  S  F  T  H  Q  K  A  L  S  I  D  L  D  T  L  I  D  M  S  C  C  F  F  G  D  R  K  K  G  H  D  L  V  H  H  D  T  R  D  A  G   : G  D  S  I  A  S  T  K  N  F  S  F  N  E  L  R  L  A  T  N  N  F  H  Q  I  N  K  I  G  R  G  G  F  G  T  V  Y  K  :  G  T  L  K  Q  G  K  D  V  A  V  K  T  L  A  A  E  S  R  Q  G  L  R  E  F  L  T  E  I  E  T  I  S  N  V  K  H  P  N  L  V  E  I  I  G  C  C  A  D  G  N  N  R  I  L  V  Y  E  Y  L  E  N  R  S  L  D  R  A  L  F   : G  S  R  T  S  I  K  L  E  W  E  K  R  T  T  I  C  L  G  T  A  R  G  L  A  Y  L  H  E  E  L  V  P  H  I  V  H  R  D  I  K  A  S  N  I  L  L  D  K  D  Y  T  P  K  I  G  D  F  G  L  A </first_frame>
            <second_frame>  W  C  S  P  P  K  A   : V  Y  W  W  *  R  L  T  F  H  L  L  I  K  R  H  Y  Q  L  I  *  T  R  *  L  T  *  V  V  A  S  L  A  T  G  K  R  V  M  I  S  F  T  M  I  Q  E  M  Q  E  :  V  T  P  L  Q  A  Q  R  I  F  H  L  M  N  *  D  *  Q  P  T  T  S  I  K  L  I  K  *  G  E  A  V  L  A  Q  Y  T  R :   E  L  *  N  K  E  K  M  L  L  *  R  H  *  Q  Q  N  Q  G  R  V  C  G  S  F  *  Q  K  L  R  Q  Y  Q  M  S  N  I  Q  I  *  L  R  *  L  D  A  V  L  M  E  I  T  G  F  W  S  M  N  I  *  K  I  E  A  L  I  G  H  C  L  :  V  Q  G  L  V  L  S  *  N  G  K  K  G  L  L  F  A  W  V  L  L  E  V  L  H  I  Y  M  K  N  *  C  H  I  *  C  T  G  I  *  K  L  V  I  F  C  L  T  R  I  I  H  Q  K  L  E  I  L  G  L   </second_frame>
            <third_frame>   G  V  P  L  P  K  Q  :  C  I  G  G  E  G  *  H  F  I  Y  S  S  K  G  T  I  N  *  F  R  H  A  N  *  H  E  L  L  L  L  W  R  P  E  K  G  S  *  S  R  S  P  *  Y  K  R  C  R  R :   *  L  H  C  K  H  K  E  F  F  I  *  *  I  K  I  S  N  Q  Q  L  P  S  N  *  *  N  R  A  R  R  F  W  H  S  I  Q   : G  N  S  K  T  R  K  R  C  C  C  E  D  T  S  S  R  I  K  A  G  F  A  G  V  F  D  R  N  *  D  N  I  K  C  Q  T  S  K  S  S  *  D  N  W  M  L  C  *  W  K  *  P  D  F  G  L  *  I  F  R  K  *  K  P  *  S  G  T  V  W :   F  K  D  *  Y  *  V  R  M  G  K  K  D  Y  Y  L  L  G  Y  C  S  R  S  C  I  S  T  *  R  T  S  A  T  Y  S  A  Q  G  Y  K  S  *  *  Y  S  A  *  Q  G  L  Y  T  K  N  W  R  F  W  A  C  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0127N23.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="8109" stop="8131"/>
                    <exon start="8980" stop="9128"/>
                    <exon start="9313" stop="9425"/>
                    <exon start="9684" stop="9894"/>
                    <exon start="9976" stop="10157"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>678</number_coding_nucleotides>
                  <number_encoded_amino_acids>226</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LVFPSQSSVLVVKANISFTHQKALSIDLDTLIDMSCCFFGDRKKGHDLVHHDTRDAGGDSIASTKNFSFNELRLATNNFHQINKIGRGGFGTVYKGTLKQGKDVAVKTLAAESRQGLREFLTEIETISNVKHPNLVEIIGCCADGNNRILVYEYLENRSLDRALFGSRTSIKLEWEKRTTICLGTARGLAYLHEELVPHIVHRDIKASNILLDKDYTPKIGDFGLA</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="12141" PGL_stop="12952"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="12141" e_stop="12952"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="12141" e_stop="12952" e_length="812"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12141" stop="12952"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U569177" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAGTTGGTGGATGAAGAACTAGATGAATTCCCGGAGAGAGAAGTCGTCAGGTACATCAAGACGGCTCTGTTTTGCACACAAGCAAATGCAAACAGAAGACCAATGATGAGCCAGGTTATTGAGATGCTTTCAAGAGATATCCAGCTAAATGAGAAAGAACTTACACCACCTGGTTTCTTCGAAGATTCTGAAGGAAGCGTGCAATCAAGATTGAAGATATCTAGAGGTAATACTAGTCAACAAAGTTCTGTACACATCACAATTACTCAGGTGACCCCTAGATAGTCATCCTTGGTGACCGCCTGATCCTGCACTTGAATCATTCTTCCTGCGACATTGTTTTGCAGCTTAAGATGACGTTTGCTTGAGATTTTCTAGGAATTGAGTTTGCAAACTTGTATATTATGGATTTTTAACAAAAAAGGATAGCTAACTTTTTCAAATCTAGTTTTTTCAAATTTGTTGAAATATTTCTGAAATCTTCATAGAAAAGTTTGAACCTTTCTGCAAGTGTAGTTCAGACACATGAAGCAAAATTGAGTTTGCAAATTCAAAATTTTTTGAAAAATTTCAAACAAACGCCATCTAAGTTCACAGAAGATTGAAATTGCAGGATTAATGATATCGGAAGGCGTTGTCAAAGTTCCTAGACAAAATTCCAGCAATTTATGTGTATTATTTTTGTATGACAAACATTTTTTTGGATCCTGTTTTTTACCTTATTATTTTTATTCTGACAGGTATTATATTAAACCGATAACATTATATAGTTTCAAGTAAAATATTCTTTCAAAATAATATTTTATCAAGAT</gDNA_template>
            <first_frame> E  L  V  D  E  E  L  D  E  F  P  E  R  E  V  V  R  Y  I  K  T  A  L  F  C  T  Q  A  N  A  N  R  R  P  M  M  S  Q  V  I  E  M  L  S  R  D  I  Q  L  N  E  K  E  L  T  P  P  G  F  F  E  D  S  E  G  S  V  Q  S  R  L  K  I  S  R  G  N  T  S  Q  Q  S  S  V  H  I  T  I  T  Q  V  T  P  R  *  S  S  L  V  T  A  *  S  C  T  *  I  I  L  P  A  T  L  F  C  S  L  R  *  R  L  L  E  I  F  *  E  L  S  L  Q  T  C  I  L  W  I  F  N  K  K  G  *  L  T  F  S  N  L  V  F  S  N  L  L  K  Y  F  *  N  L  H  R  K  V  *  T  F  L  Q  V  *  F  R  H  M  K  Q  N  *  V  C  K  F  K  I  F  *  K  I  S  N  K  R  H  L  S  S  Q  K  I  E  I  A  G  L  M  I  S  E  G  V  V  K  V  P  R  Q  N  S  S  N  L  C  V  L  F  L  Y  D  K  H  F  F  G  S  C  F  L  P  Y  Y  F  Y  S  D  R  Y  Y  I  K  P  I  T  L  Y  S  F  K  *  N  I  L  S  K  *  Y  F  I  K   </first_frame>
            <second_frame>  S  W  W  M  K  N  *  M  N  S  R  R  E  K  S  S  G  T  S  R  R  L  C  F  A  H  K  Q  M  Q  T  E  D  Q  *  *  A  R  L  L  R  C  F  Q  E  I  S  S  *  M  R  K  N  L  H  H  L  V  S  S  K  I  L  K  E  A  C  N  Q  D  *  R  Y  L  E  V  I  L  V  N  K  V  L  Y  T  S  Q  L  L  R  *  P  L  D  S  H  P  W  *  P  P  D  P  A  L  E  S  F  F  L  R  H  C  F  A  A  *  D  D  V  C  L  R  F  S  R  N  *  V  C  K  L  V  Y  Y  G  F  L  T  K  K  D  S  *  L  F  Q  I  *  F  F  Q  I  C  *  N  I  S  E  I  F  I  E  K  F  E  P  F  C  K  C  S  S  D  T  *  S  K  I  E  F  A  N  S  K  F  F  E  K  F  Q  T  N  A  I  *  V  H  R  R  L  K  L  Q  D  *  *  Y  R  K  A  L  S  K  F  L  D  K  I  P  A  I  Y  V  Y  Y  F  C  M  T  N  I  F  L  D  P  V  F  Y  L  I  I  F  I  L  T  G  I  I  L  N  R  *  H  Y  I  V  S  S  K  I  F  F  Q  N  N  I  L  S  R  </second_frame>
            <third_frame>   V  G  G  *  R  T  R  *  I  P  G  E  R  S  R  Q  V  H  Q  D  G  S  V  L  H  T  S  K  C  K  Q  K  T  N  D  E  P  G  Y  *  D  A  F  K  R  Y  P  A  K  *  E  R  T  Y  T  T  W  F  L  R  R  F  *  R  K  R  A  I  K  I  E  D  I  *  R  *  Y  *  S  T  K  F  C  T  H  H  N  Y  S  G  D  P  *  I  V  I  L  G  D  R  L  I  L  H  L  N  H  S  S  C  D  I  V  L  Q  L  K  M  T  F  A  *  D  F  L  G  I  E  F  A  N  L  Y  I  M  D  F  *  Q  K  R  I  A  N  F  F  K  S  S  F  F  K  F  V  E  I  F  L  K  S  S  *  K  S  L  N  L  S  A  S  V  V  Q  T  H  E  A  K  L  S  L  Q  I  Q  N  F  L  K  N  F  K  Q  T  P  S  K  F  T  E  D  *  N  C  R  I  N  D  I  G  R  R  C  Q  S  S  *  T  K  F  Q  Q  F  M  C  I  I  F  V  *  Q  T  F  F  W  I  L  F  F  T  L  L  F  L  F  *  Q  V  L  Y  *  T  D  N  I  I  *  F  Q  V  K  Y  S  F  K  I  I  F  Y  Q  D </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0127N23.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="12141" stop="12425"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>282</number_coding_nucleotides>
                  <number_encoded_amino_acids>94</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ELVDEELDEFPEREVVRYIKTALFCTQANANRRPMMSQVIEMLSRDIQLNEKELTPPGFFEDSEGSVQSRLKISRGNTSQQSSVHITITQVTPR*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0127N23.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="12705" stop="12920"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>213</number_coding_nucleotides>
                  <number_encoded_amino_acids>71</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KISNKRHLSSQKIEIAGLMISEGVVKVPRQNSSNLCVLFLYDKHFFGSCFLPYYFYSDRYYIKPITLYSFK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="17370" PGL_stop="13511"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="17370" e_stop="16884"/>
            <exon e_start="14488" e_stop="14335"/>
            <exon e_start="14201" e_stop="13511"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.924" acc_prob="0.554" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="17370" e_stop="16884" e_length="487"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="16883" i_stop="14489" i_length="2395"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="14488" e_stop="14335" e_length="154"/>
          </exon>
          <intron i_serial="2" don_prob="0.924" acc_prob="0.554">
            <gDNA_intron_boundary i_start="14334" i_stop="14202" i_length="133"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="14201" e_stop="13511" e_length="691"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17370" stop="16884"/>
              <exon start="14488" stop="14335"/>
              <exon start="14201" stop="13511"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U580379" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTGCGCATATATAGGTGTACTAGAGAGAAGGAAAATTCGAGAGATTTTGCAGACTGTAGAGAGAGAAAGGAGAGAAAAGAAGGGAAATGGCTGCATTTGATGCGTTCAGTATGGACGGTGAGGTACCGGCACCGGCGGCATCAACACCGTTCGATGATGGAGACTACGACGGCTCTTACACCGCCTTCTCCAACGCCGATACGCCGCCGTTTCACGGCTCTGGAGGATTCGGTGGAGACTATGACGAAGTAACGGTGGAACACGTATCTCATACCGTCGATAGTCCCGATCCCTACGGATACGGGTCAGATTCGTTTCCAAACCAAACCGGTTCATTTGGAGCTTCTGCAGCTCCGATCTCGAACGGGAATGGTAAGCCCTACGATCTAGGTGAAGATACTGAGGGAATTTTCAGTTCCGATGGACCCGTTCTCCCCCCTCCGAATGAAATGCGTGAGGAAGGTTTTGCGCTCCGCGAATGGCGAAG : GCAAAATGCTATCCGTCTTGAGGAGAAGGAGAAGAGAGAAAAGGAAATCAGAAGCCAAATTATTGAGGAAGGTGAAGAATATAAGAAAGCATTCTATGAGAAAAGAAATCTCAGTATTGAGACCAACAAGACAACTAACCGCGAGAAAGAAAAG : CTGTACTTGACTAGTCAAGAGAAGTTCCATAAAGAAGCTGATAAGCAATATTGGAAAGCCATAGCAGAGCTCATTCCCAAGGAGGTGCCCAGCATTGAGAAGAAGGGAAGGAAGAAGGATCAAGATAAGAAGCCATCCATCACAGTCGTCCAAGGGCCTAAACCTGGGAAACCTACCGATCTTTCAAGGATGCGCCACATACTGCTGAAGCTTAAGCACACCCCACCACCTCACATGATACCACCCCCTCCTGCCCCTGCCAAGGACGCCAAAGTTGGGAAGGATGGAAAAGACACCAAGGATGCCAAAGCTGGAAAGGACGGAAAAGACACCAAGAATGCTAAAGATACTGTAGCACCAAATGGGACTCCAGATGCACCTACCAGTGATGCCAAAGTTACTCAGACATCAGAAGAACCTACTGCTGCAGAATGATCGGCTTTTAGCCTAATTTCTTTAGTCTTTGATGTTGTAATGTGTTATCCTCTTACATATACTCTTTTTTCTCTATGAATTTTGTATCATTTACTATATTTTGTGTCATTCTACTACTATTCTATTGGTTCGTGACAGACATTAGCTGCATTTTGTTGCATTGGATGTCTGAGTTTGTTTATTGTACTATTTAGGTCCTTTCTTAACTGGAGGTGAATTCATTATTTTCTTGTTTACAGAAACCTTATATTTCTTG</gDNA_template>
            <first_frame> V  R  I  Y  R  C  T  R  E  K  E  N  S  R  D  F  A  D  C  R  E  R  K  E  R  K  E  G  K  W  L  H  L  M  R  S  V  W  T  V  R  Y  R  H  R  R  H  Q  H  R  S  M  M  E  T  T  T  A  L  T  P  P  S  P  T  P  I  R  R  R  F  T  A  L  E  D  S  V  E  T  M  T  K  *  R  W  N  T  Y  L  I  P  S  I  V  P  I  P  T  D  T  G  Q  I  R  F  Q  T  K  P  V  H  L  E  L  L  Q  L  R  S  R  T  G  M  V  S  P  T  I  *  V  K  I  L  R  E  F  S  V  P  M  D  P  F  S  P  L  R  M  K  C  V  R  K  V  L  R  S  A  N  G  E   : G  K  M  L  S  V  L  R  R  R  R  R  E  K  R  K  S  E  A  K  L  L  R  K  V  K  N  I  R  K  H  S  M  R  K  E  I  S  V  L  R  P  T  R  Q  L  T  A  R  K  K  S :   C  T  *  L  V  K  R  S  S  I  K  K  L  I  S  N  I  G  K  P  *  Q  S  S  F  P  R  R  C  P  A  L  R  R  R  E  G  R  R  I  K  I  R  S  H  P  S  Q  S  S  K  G  L  N  L  G  N  L  P  I  F  Q  G  C  A  T  Y  C  *  S  L  S  T  P  H  H  L  T  *  Y  H  P  L  L  P  L  P  R  T  P  K  L  G  R  M  E  K  T  P  R  M  P  K  L  E  R  T  E  K  T  P  R  M  L  K  I  L  *  H  Q  M  G  L  Q  M  H  L  P  V  M  P  K  L  L  R  H  Q  K  N  L  L  L  Q  N  D  R  L  L  A  *  F  L  *  S  L  M  L  *  C  V  I  L  L  H  I  L  F  F  L  Y  E  F  C  I  I  Y  Y  I  L  C  H  S  T  T  I  L  L  V  R  D  R  H  *  L  H  F  V  A  L  D  V  *  V  C  L  L  Y  Y  L  G  P  F  L  T  G  G  E  F  I  I  F  L  F  T  E  T  L  Y  F  L </first_frame>
            <second_frame>  C  A  Y  I  G  V  L  E  R  R  K  I  R  E  I  L  Q  T  V  E  R  E  R  R  E  K  K  G  N  G  C  I  *  C  V  Q  Y  G  R  *  G  T  G  T  G  G  I  N  T  V  R  *  W  R  L  R  R  L  L  H  R  L  L  Q  R  R  Y  A  A  V  S  R  L  W  R  I  R  W  R  L  *  R  S  N  G  G  T  R  I  S  Y  R  R  *  S  R  S  L  R  I  R  V  R  F  V  S  K  P  N  R  F  I  W  S  F  C  S  S  D  L  E  R  E  W  *  A  L  R  S  R  *  R  Y  *  G  N  F  Q  F  R  W  T  R  S  P  P  S  E  *  N  A  *  G  R  F  C  A  P  R  M  A  K  :  A  K  C  Y  P  S  *  G  E  G  E  E  R  K  G  N  Q  K  P  N  Y  *  G  R  *  R  I  *  E  S  I  L  *  E  K  K  S  Q  Y  *  D  Q  Q  D  N  *  P  R  E  R  K   : A  V  L  D  *  S  R  E  V  P  *  R  S  *  *  A  I  L  E  S  H  S  R  A  H  S  Q  G  G  A  Q  H  *  E  E  G  K  E  E  G  S  R  *  E  A  I  H  H  S  R  P  R  A  *  T  W  E  T  Y  R  S  F  K  D  A  P  H  T  A  E  A  *  A  H  P  T  T  S  H  D  T  T  P  S  C  P  C  Q  G  R  Q  S  W  E  G  W  K  R  H  Q  G  C  Q  S  W  K  G  R  K  R  H  Q  E  C  *  R  Y  C  S  T  K  W  D  S  R  C  T  Y  Q  *  C  Q  S  Y  S  D  I  R  R  T  Y  C  C  R  M  I  G  F  *  P  N  F  F  S  L  *  C  C  N  V  L  S  S  Y  I  Y  S  F  F  S  M  N  F  V  S  F  T  I  F  C  V  I  L  L  L  F  Y  W  F  V  T  D  I  S  C  I  L  L  H  W  M  S  E  F  V  Y  C  T  I  *  V  L  S  *  L  E  V  N  S  L  F  S  C  L  Q  K  P  Y  I  S   </second_frame>
            <third_frame>   A  H  I  *  V  Y  *  R  E  G  K  F  E  R  F  C  R  L  *  R  E  K  G  E  K  R  R  E  M  A  A  F  D  A  F  S  M  D  G  E  V  P  A  P  A  A  S  T  P  F  D  D  G  D  Y  D  G  S  Y  T  A  F  S  N  A  D  T  P  P  F  H  G  S  G  G  F  G  G  D  Y  D  E  V  T  V  E  H  V  S  H  T  V  D  S  P  D  P  Y  G  Y  G  S  D  S  F  P  N  Q  T  G  S  F  G  A  S  A  A  P  I  S  N  G  N  G  K  P  Y  D  L  G  E  D  T  E  G  I  F  S  S  D  G  P  V  L  P  P  P  N  E  M  R  E  E  G  F  A  L  R  E  W  R  R :   Q  N  A  I  R  L  E  E  K  E  K  R  E  K  E  I  R  S  Q  I  I  E  E  G  E  E  Y  K  K  A  F  Y  E  K  R  N  L  S  I  E  T  N  K  T  T  N  R  E  K  E  K  :  L  Y  L  T  S  Q  E  K  F  H  K  E  A  D  K  Q  Y  W  K  A  I  A  E  L  I  P  K  E  V  P  S  I  E  K  K  G  R  K  K  D  Q  D  K  K  P  S  I  T  V  V  Q  G  P  K  P  G  K  P  T  D  L  S  R  M  R  H  I  L  L  K  L  K  H  T  P  P  P  H  M  I  P  P  P  P  A  P  A  K  D  A  K  V  G  K  D  G  K  D  T  K  D  A  K  A  G  K  D  G  K  D  T  K  N  A  K  D  T  V  A  P  N  G  T  P  D  A  P  T  S  D  A  K  V  T  Q  T  S  E  E  P  T  A  A  E  *  S  A  F  S  L  I  S  L  V  F  D  V  V  M  C  Y  P  L  T  Y  T  L  F  S  L  *  I  L  Y  H  L  L  Y  F  V  S  F  Y  Y  Y  S  I  G  S  *  Q  T  L  A  A  F  C  C  I  G  C  L  S  L  F  I  V  L  F  R  S  F  L  N  W  R  *  I  H  Y  F  L  V  Y  R  N  L  I  F  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0127N23.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="17311" stop="16884"/>
                    <exon start="14488" stop="14335"/>
                    <exon start="14201" stop="13767"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1014</number_coding_nucleotides>
                  <number_encoded_amino_acids>338</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>REKGEKRREMAAFDAFSMDGEVPAPAASTPFDDGDYDGSYTAFSNADTPPFHGSGGFGGDYDEVTVEHVSHTVDSPDPYGYGSDSFPNQTGSFGASAAPISNGNGKPYDLGEDTEGIFSSDGPVLPPPNEMREEGFALREWRRQNAIRLEEKEKREKEIRSQIIEEGEEYKKAFYEKRNLSIETNKTTNREKEKLYLTSQEKFHKEADKQYWKAIAELIPKEVPSIEKKGRKKDQDKKPSITVVQGPKPGKPTDLSRMRHILLKLKHTPPPHMIPPPPAPAKDAKVGKDGKDTKDAKAGKDGKDTKNAKDTVAPNGTPDAPTSDAKVTQTSEEPTAAE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="20022" PGL_stop="18746"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="20022" e_stop="20012"/>
            <exon e_start="19933" e_stop="19860"/>
            <exon e_start="19514" e_stop="18746"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.792" e_score="1.000"/>
          <exon-only e_score="0.948"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="20022" e_stop="20012" e_length="11"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.998">
            <gDNA_intron_boundary i_start="20011" i_stop="19934" i_length="78"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="19933" e_stop="19860" e_length="74"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.792">
            <gDNA_intron_boundary i_start="19859" i_stop="19515" i_length="345"/>
          </intron>
          <exon e_serial="3" e_score="0.948">
            <gDNA_exon_boundary e_start="19514" e_stop="18746" e_length="769"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20022" stop="20012"/>
              <exon start="19933" stop="19860"/>
              <exon start="19514" stop="18746"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U564873" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTAAAACACAG : GCTGCTGAAAGGGCTCTTGTTGCTCTGAAGTCTGAGCTGGCTCAATTTTCTCACAAGCGCCAGGGTTCTCCAAG : ATCATTGCAGCAGCAGGGATTTTCTAATAAAAGATTGAAACCTGAATATTCTCGGGGTGTGCAGCAGAGAGTACCATTGTCTGGTAGATTCCCGAAGAATACTTCCGCTATGCCATGAACTATGTATAAAGATCTTCACCTCTGCTTGTACATCAACCCCATAGAAATTTTAACATACATGGGAACATCTGCCGCTGTGATTTGTGAAGCCAATTGGGATCTTTACTATGAATCACTGTCCTGCTGTTTCAGCTCGACTATATCCAGTATGTACGCTCACAATAGAAGCAAGTGTCTGGATCGATAGATCAGAATTGAATCACCTTTCGGGAGCCAGGTAGTTCAAATTTGTAAACTGTGGATGTCTTGCTATTTTCCATGTGATTTTGGGAGATCTCTAAAAAGCCAGTTAGAGCCTGGAATGAGTTCGCATCTTCATTCAAGATGGGCACCAAAAGCCGCATACTTTTGGGGAGTTAGTTCTTCCGGCATTGAATACACCTTGGCCATGTCCAATGCGTTTTCCGGAGTACACTCCAATTTTGACGATTTCATAGTTGATTTAGGATATGATTTTGAGACCTTTCGCTTTTGTGGTTTCTCCCGCATTTTTTAGATACCAAAATAGGACGAGTGGAAAATTTTGTTAAGCTGTAATTTGCTTACTGTGTAGTCTATTTTTGCATTGTTTTTTTGTAGCCTCAGGGGTACAATTTAATGTCCAAATGTAACCTCCTCAATTGATTAATGGAATCTTTAGTTTTCAGCA</gDNA_template>
            <first_frame> L  K  H  R :   L  L  K  G  L  L  L  L  *  S  L  S  W  L  N  F  L  T  S  A  R  V  L  Q   : D  H  C  S  S  R  D  F  L  I  K  D  *  N  L  N  I  L  G  V  C  S  R  E  Y  H  C  L  V  D  S  R  R  I  L  P  L  C  H  E  L  C  I  K  I  F  T  S  A  C  T  S  T  P  *  K  F  *  H  T  W  E  H  L  P  L  *  F  V  K  P  I  G  I  F  T  M  N  H  C  P  A  V  S  A  R  L  Y  P  V  C  T  L  T  I  E  A  S  V  W  I  D  R  S  E  L  N  H  L  S  G  A  R  *  F  K  F  V  N  C  G  C  L  A  I  F  H  V  I  L  G  D  L  *  K  A  S  *  S  L  E  *  V  R  I  F  I  Q  D  G  H  Q  K  P  H  T  F  G  E  L  V  L  P  A  L  N  T  P  W  P  C  P  M  R  F  P  E  Y  T  P  I  L  T  I  S  *  L  I  *  D  M  I  L  R  P  F  A  F  V  V  S  P  A  F  F  R  Y  Q  N  R  T  S  G  K  F  C  *  A  V  I  C  L  L  C  S  L  F  L  H  C  F  F  V  A  S  G  V  Q  F  N  V  Q  M  *  P  P  Q  L  I  N  G  I  F  S  F  Q   </first_frame>
            <second_frame>  *  N  T   : G  C  *  K  G  S  C  C  S  E  V  *  A  G  S  I  F  S  Q  A  P  G  F  S  K  :  I  I  A  A  A  G  I  F  *  *  K  I  E  T  *  I  F  S  G  C  A  A  E  S  T  I  V  W  *  I  P  E  E  Y  F  R  Y  A  M  N  Y  V  *  R  S  S  P  L  L  V  H  Q  P  H  R  N  F  N  I  H  G  N  I  C  R  C  D  L  *  S  Q  L  G  S  L  L  *  I  T  V  L  L  F  Q  L  D  Y  I  Q  Y  V  R  S  Q  *  K  Q  V  S  G  S  I  D  Q  N  *  I  T  F  R  E  P  G  S  S  N  L  *  T  V  D  V  L  L  F  S  M  *  F  W  E  I  S  K  K  P  V  R  A  W  N  E  F  A  S  S  F  K  M  G  T  K  S  R  I  L  L  G  S  *  F  F  R  H  *  I  H  L  G  H  V  Q  C  V  F  R  S  T  L  Q  F  *  R  F  H  S  *  F  R  I  *  F  *  D  L  S  L  L  W  F  L  P  H  F  L  D  T  K  I  G  R  V  E  N  F  V  K  L  *  F  A  Y  C  V  V  Y  F  C  I  V  F  L  *  P  Q  G  Y  N  L  M  S  K  C  N  L  L  N  *  L  M  E  S  L  V  F  S  </second_frame>
            <third_frame>   K  T  Q  :  A  A  E  R  A  L  V  A  L  K  S  E  L  A  Q  F  S  H  K  R  Q  G  S  P  R :   S  L  Q  Q  Q  G  F  S  N  K  R  L  K  P  E  Y  S  R  G  V  Q  Q  R  V  P  L  S  G  R  F  P  K  N  T  S  A  M  P  *  T  M  Y  K  D  L  H  L  C  L  Y  I  N  P  I  E  I  L  T  Y  M  G  T  S  A  A  V  I  C  E  A  N  W  D  L  Y  Y  E  S  L  S  C  C  F  S  S  T  I  S  S  M  Y  A  H  N  R  S  K  C  L  D  R  *  I  R  I  E  S  P  F  G  S  Q  V  V  Q  I  C  K  L  W  M  S  C  Y  F  P  C  D  F  G  R  S  L  K  S  Q  L  E  P  G  M  S  S  H  L  H  S  R  W  A  P  K  A  A  Y  F  W  G  V  S  S  S  G  I  E  Y  T  L  A  M  S  N  A  F  S  G  V  H  S  N  F  D  D  F  I  V  D  L  G  Y  D  F  E  T  F  R  F  C  G  F  S  R  I  F  *  I  P  K  *  D  E  W  K  I  L  L  S  C  N  L  L  T  V  *  S  I  F  A  L  F  F  C  S  L  R  G  T  I  *  C  P  N  V  T  S  S  I  D  *  W  N  L  *  F  S  A </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0127N23.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="19207" stop="18899"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>306</number_coding_nucleotides>
                  <number_encoded_amino_acids>102</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IRIESPFGSQVVQICKLWMSCYFPCDFGRSLKSQLEPGMSSHLHSRWAPKAAYFWGVSSSGIEYTLAMSNAFSGVHSNFDDFIVDLGYDFETFRFCGFSRIF*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0127N23.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="20020" stop="20012"/>
                    <exon start="19933" stop="19860"/>
                    <exon start="19514" stop="19397"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KTQAAERALVALKSELAQFSHKRQGSPRSLQQQGFSNKRLKPEYSRGVQQRVPLSGRFPKNTSAMP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="26865" PGL_stop="25998"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="26865" e_stop="26673"/>
            <exon e_start="26410" e_stop="26200"/>
            <exon e_start="26117" e_stop="25998"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.972" acc_prob="0.823" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.971" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="26865" e_stop="26673" e_length="193"/>
          </exon>
          <intron i_serial="1" don_prob="0.972" acc_prob="0.823">
            <gDNA_intron_boundary i_start="26672" i_stop="26411" i_length="262"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="26410" e_stop="26200" e_length="211"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.971">
            <gDNA_intron_boundary i_start="26199" i_stop="26118" i_length="82"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="26117" e_stop="25998" e_length="120"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26865" stop="26673"/>
              <exon start="26410" stop="26200"/>
              <exon start="26117" stop="25998"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U600237" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGTCAAGCGTTACCAGGAGGATAAAATTATTTTAAAGCAATATGCCGAAAATGATCAGGTTGTTGACAATGGAAAGGTGATCAGATCTCAGTCTGAGGTTTTCCCCGCATTGTCTGATAATCACCAACCTATTGTCAGACCCCTGATTAGGTTGCAAGATAGAAACATTATTCTTACTCGTATTAATCCAATG : ATCCGTGATACTAGTGTTCTTGTGAGATTGAGACCTGCTTGGGAGGATCTCCGCAGCTATCTGACTGCAAGGGGTCGGAAGCGCTTTGAAGTTTATGTGTGCACAATGGCTGAAAGAGATTATGCTTTAGAAATGTGGCGCCTTCTTGATCCAGATTCAAACTTGATTAACTCACAAGAACTCTTGGATCGTATTGTCTGTGTCAAGTCTG : GCTTGAGGAAATCTTTGTTCAATGTATTCCAAGATGGAAATTGTCATCCTAAGATGGCATTGGTGATTGATGATCGCTTGAAAGTGTGGGATGATAAGGATCAACCTCGAGTGCACGTTG</gDNA_template>
            <first_frame> G  Q  A  L  P  G  G  *  N  Y  F  K  A  I  C  R  K  *  S  G  C  *  Q  W  K  G  D  Q  I  S  V  *  G  F  P  R  I  V  *  *  S  P  T  Y  C  Q  T  P  D  *  V  A  R  *  K  H  Y  S  Y  S  Y  *  S  N   : D  P  *  Y  *  C  S  C  E  I  E  T  C  L  G  G  S  P  Q  L  S  D  C  K  G  S  E  A  L  *  S  L  C  V  H  N  G  *  K  R  L  C  F  R  N  V  A  P  S  *  S  R  F  K  L  D  *  L  T  R  T  L  G  S  Y  C  L  C  Q  V  W :   L  E  E  I  F  V  Q  C  I  P  R  W  K  L  S  S  *  D  G  I  G  D  *  *  S  L  E  S  V  G  *  *  G  S  T  S  S  A  R   </first_frame>
            <second_frame>  V  K  R  Y  Q  E  D  K  I  I  L  K  Q  Y  A  E  N  D  Q  V  V  D  N  G  K  V  I  R  S  Q  S  E  V  F  P  A  L  S  D  N  H  Q  P  I  V  R  P  L  I  R  L  Q  D  R  N  I  I  L  T  R  I  N  P  M  :  I  R  D  T  S  V  L  V  R  L  R  P  A  W  E  D  L  R  S  Y  L  T  A  R  G  R  K  R  F  E  V  Y  V  C  T  M  A  E  R  D  Y  A  L  E  M  W  R  L  L  D  P  D  S  N  L  I  N  S  Q  E  L  L  D  R  I  V  C  V  K  S   : G  L  R  K  S  L  F  N  V  F  Q  D  G  N  C  H  P  K  M  A  L  V  I  D  D  R  L  K  V  W  D  D  K  D  Q  P  R  V  H  V  </second_frame>
            <third_frame>   S  S  V  T  R  R  I  K  L  F  *  S  N  M  P  K  M  I  R  L  L  T  M  E  R  *  S  D  L  S  L  R  F  S  P  H  C  L  I  I  T  N  L  L  S  D  P  *  L  G  C  K  I  E  T  L  F  L  L  V  L  I  Q  * :   S  V  I  L  V  F  L  *  D  *  D  L  L  G  R  I  S  A  A  I  *  L  Q  G  V  G  S  A  L  K  F  M  C  A  Q  W  L  K  E  I  M  L  *  K  C  G  A  F  L  I  Q  I  Q  T  *  L  T  H  K  N  S  W  I  V  L  S  V  S  S  L  :  A  *  G  N  L  C  S  M  Y  S  K  M  E  I  V  I  L  R  W  H  W  *  L  M  I  A  *  K  C  G  M  I  R  I  N  L  E  C  T  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0127N23.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="26864" stop="26673"/>
                    <exon start="26410" stop="26200"/>
                    <exon start="26117" stop="25999"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>522</number_coding_nucleotides>
                  <number_encoded_amino_acids>174</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VKRYQEDKIILKQYAENDQVVDNGKVIRSQSEVFPALSDNHQPIVRPLIRLQDRNIILTRINPMIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPDSNLINSQELLDRIVCVKSGLRKSLFNVFQDGNCHPKMALVIDDRLKVWDDKDQPRVHV</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="29343" PGL_stop="28912"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="29343" e_stop="28912"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="29343" e_stop="28912" e_length="432"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29343" stop="28912"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U565855" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTGTAATAAGAGATAGAGAGAGAAGGAGATAAGAGAGAGAAAGTACAAAATTGACCTTTCACTCTGTGTGGATCTAGGGTTTCACAAAACACAGTTGAGCCACCGCATCGTCATCTACACCGCCGTACAACAACTACTATCTGAAAAATCATCTAAACCCTACTTTTAATCTTCTCTTAATCATCATCTTCTATAAAGAAACCCTAAAACTTTCATTTTTTTGGGTATTTTTTTGGGTAAATCTGAATGAAATTTGATAAACGATGACGTTTTATTGGTAGATTTGATAAGATCTGACTTTTTTTTTCCTGTTTCGATTGGATTTTAAGCATAATTTCTAGATCGATCTATATTGACGATGAGAAACTGAAAGGGAAAGGATAGAAATTGGTTTTAATTTTTGAATTTTTTGTGATTACAGAGAAACAACGC</gDNA_template>
            <first_frame> V  *  *  E  I  E  R  E  G  D  K  R  E  K  V  Q  N  *  P  F  T  L  C  G  S  R  V  S  Q  N  T  V  E  P  P  H  R  H  L  H  R  R  T  T  T  T  I  *  K  I  I  *  T  L  L  L  I  F  S  *  S  S  S  S  I  K  K  P  *  N  F  H  F  F  G  Y  F  F  G  *  I  *  M  K  F  D  K  R  *  R  F  I  G  R  F  D  K  I  *  L  F  F  S  C  F  D  W  I  L  S  I  I  S  R  S  I  Y  I  D  D  E  K  L  K  G  K  G  *  K  L  V  L  I  F  E  F  F  V  I  T  E  K  Q  R </first_frame>
            <second_frame>  C  N  K  R  *  R  E  K  E  I  R  E  R  K  Y  K  I  D  L  S  L  C  V  D  L  G  F  H  K  T  Q  L  S  H  R  I  V  I  Y  T  A  V  Q  Q  L  L  S  E  K  S  S  K  P  Y  F  *  S  S  L  N  H  H  L  L  *  R  N  P  K  T  F  I  F  L  G  I  F  L  G  K  S  E  *  N  L  I  N  D  D  V  L  L  V  D  L  I  R  S  D  F  F  F  P  V  S  I  G  F  *  A  *  F  L  D  R  S  I  L  T  M  R  N  *  K  G  K  D  R  N  W  F  *  F  L  N  F  L  *  L  Q  R  N  N   </second_frame>
            <third_frame>   V  I  R  D  R  E  R  R  R  *  E  R  E  S  T  K  L  T  F  H  S  V  W  I  *  G  F  T  K  H  S  *  A  T  A  S  S  S  T  P  P  Y  N  N  Y  Y  L  K  N  H  L  N  P  T  F  N  L  L  L  I  I  I  F  Y  K  E  T  L  K  L  S  F  F  W  V  F  F  W  V  N  L  N  E  I  *  *  T  M  T  F  Y  W  *  I  *  *  D  L  T  F  F  F  L  F  R  L  D  F  K  H  N  F  *  I  D  L  Y  *  R  *  E  T  E  R  E  R  I  E  I  G  F  N  F  *  I  F  C  D  Y  R  E  T  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLm0127N23.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="33815" PGL_stop="44515"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="33815" e_stop="34678"/>
            <exon e_start="36625" e_stop="36724"/>
            <exon e_start="37396" e_stop="37729"/>
            <exon e_start="38334" e_stop="38446"/>
            <exon e_start="38869" e_stop="38997"/>
            <exon e_start="39085" e_stop="39178"/>
            <exon e_start="39321" e_stop="39431"/>
            <exon e_start="40383" e_stop="40987"/>
            <exon e_start="41242" e_stop="41492"/>
            <exon e_start="42914" e_stop="43067"/>
            <exon e_start="43603" e_stop="43700"/>
            <exon e_start="43788" e_stop="43869"/>
            <exon e_start="44119" e_stop="44515"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.916" acc_prob="0.945" e_score="0.997"/>
          <exon-intron don_prob="0.976" acc_prob="0.755" e_score="1.000"/>
          <exon-intron don_prob="0.881" acc_prob="0.997" e_score="0.991"/>
          <exon-intron don_prob="0.000" acc_prob="0.950" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.959" e_score="0.992"/>
          <exon-intron don_prob="0.942" acc_prob="0.995" e_score="0.989"/>
          <exon-intron don_prob="0.982" acc_prob="0.963" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.998" e_score="0.998"/>
          <exon-intron don_prob="0.995" acc_prob="0.151" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.938" e_score="1.000"/>
          <exon-intron don_prob="0.104" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="33815" e_stop="34678" e_length="864"/>
          </exon>
          <intron i_serial="1" don_prob="0.916" acc_prob="0.945">
            <gDNA_intron_boundary i_start="34679" i_stop="36624" i_length="1946"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="36625" e_stop="36724" e_length="100"/>
          </exon>
          <intron i_serial="2" don_prob="0.976" acc_prob="0.755">
            <gDNA_intron_boundary i_start="36725" i_stop="37395" i_length="671"/>
          </intron>
          <exon e_serial="3" e_score="0.991">
            <gDNA_exon_boundary e_start="37396" e_stop="37729" e_length="334"/>
          </exon>
          <intron i_serial="3" don_prob="0.881" acc_prob="0.997">
            <gDNA_intron_boundary i_start="37730" i_stop="38333" i_length="604"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="38334" e_stop="38446" e_length="113"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.950">
            <gDNA_intron_boundary i_start="38447" i_stop="38868" i_length="422"/>
          </intron>
          <exon e_serial="5" e_score="0.992">
            <gDNA_exon_boundary e_start="38869" e_stop="38997" e_length="129"/>
          </exon>
          <intron i_serial="5" don_prob="0.990" acc_prob="0.959">
            <gDNA_intron_boundary i_start="38998" i_stop="39084" i_length="87"/>
          </intron>
          <exon e_serial="6" e_score="0.989">
            <gDNA_exon_boundary e_start="39085" e_stop="39178" e_length="94"/>
          </exon>
          <intron i_serial="6" don_prob="0.942" acc_prob="0.995">
            <gDNA_intron_boundary i_start="39179" i_stop="39320" i_length="142"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="39321" e_stop="39431" e_length="111"/>
          </exon>
          <intron i_serial="7" don_prob="0.982" acc_prob="0.963">
            <gDNA_intron_boundary i_start="39432" i_stop="40382" i_length="951"/>
          </intron>
          <exon e_serial="8" e_score="0.998">
            <gDNA_exon_boundary e_start="40383" e_stop="40987" e_length="605"/>
          </exon>
          <intron i_serial="8" don_prob="1.000" acc_prob="0.998">
            <gDNA_intron_boundary i_start="40988" i_stop="41241" i_length="254"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="41242" e_stop="41492" e_length="251"/>
          </exon>
          <intron i_serial="9" don_prob="0.995" acc_prob="0.151">
            <gDNA_intron_boundary i_start="41493" i_stop="42913" i_length="1421"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="42914" e_stop="43067" e_length="154"/>
          </exon>
          <intron i_serial="10" don_prob="0.995" acc_prob="1.000">
            <gDNA_intron_boundary i_start="43068" i_stop="43602" i_length="535"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="43603" e_stop="43700" e_length="98"/>
          </exon>
          <intron i_serial="11" don_prob="1.000" acc_prob="0.938">
            <gDNA_intron_boundary i_start="43701" i_stop="43787" i_length="87"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="43788" e_stop="43869" e_length="82"/>
          </exon>
          <intron i_serial="12" don_prob="0.104" acc_prob="1.000">
            <gDNA_intron_boundary i_start="43870" i_stop="44118" i_length="249"/>
          </intron>
          <exon e_serial="13" e_score="0.997">
            <gDNA_exon_boundary e_start="44119" e_stop="44515" e_length="397"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33815" stop="34678"/>
              <exon start="36625" stop="36724"/>
              <exon start="37396" stop="37729"/>
              <exon start="38334" stop="38446"/>
              <exon start="38869" stop="38997"/>
              <exon start="39085" stop="39178"/>
              <exon start="39321" stop="39431"/>
              <exon start="40383" stop="40987"/>
              <exon start="41242" stop="41492"/>
              <exon start="42914" stop="43067"/>
              <exon start="43603" stop="43700"/>
              <exon start="43788" stop="43869"/>
              <exon start="44119" stop="44515"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U570314" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCAAATCTTCAAATCAGAGCAAACTCACAACACACTTTCTATAAACCCTAATTTCAGGTTCCAAATTACCTCAAATTTTTGGTTTTAATAACGAAAATACATCAATATTCGTGTTCTTTAGTTGATCTAGTTGCAGGAATTTTGAATTCTCCGTCGGAAAATGATCGTTAGAACATACGGCCGGCGGAGTAGAAGCATGTCTCGGAGCTACTCTGAATCAGGGTTAAATGATGAAGTTTCGGAACACACACTTTCTCAGGAGAATTCTCAAGATATTTACAGTTTTGGGTTTTCATCTCAAGACTCAGTTCACTGGTCGTCGAATTTCAATAATTCAGATCCATACGATGTCGGCTCATCTCAAGGGTGTCAAGAATTGTCGATTTTGCCGTCAAGGAAGGAGGATAGGGATTTGGGTTTTGAGGGTCATGATGGGGTTTTGTGGAAACCCAAGAAAGTAAAGATGTTTGATTGGGAGACTTATAGTTTGAATTCATCACAAGAATCGGATGAATTTTCGTTTTTACCCGATGGGGGGGAGTATGGTGGTCTTGGGAAATTTGATGGGGGATTACATGAACCAATGAAGGTGAAGAAGACTGGGAAGGGTAAGGAAAATGGGGTTTTGCAGAAGAAGAAGAAGAAGGTGAAGTCGAAGGAGCTGGGATTGCCTTCACTGGGGCCCACAGCGACTTTGATGGAGACTCAAGAATGTGGTGAGATGATGGAACATATGGATGAGGTGAATTTTGCGTTGGATGGTTTGAGGAAAGGGCAGCCTGCGAGAATCAGAAGGGCGAGTTTATTGTCATTGCTATCTATATGTGGAACAGCTCAGCAGCGTCGCCTTTTGCGGGCTCACGG : GATGGCAAAAACAATAATTGATACTGTTTTGGGACTCAGCTTTGATGACTCACCTAGCAACCTTGCTGCAGCAGGTCTATTCTACATTTTGACTAGTGAT : GGAGGAGATGACCATCTTCTTGATTCACCCAGCTGCATTCGCTTTCTTATAAAATTGTTAAGACCAGTTGCTGCTCCTGCTTCCGTAGCAAAGGCTCCAACTATTGGGAGCAAACTTTTGGCGATGCGCTTAGATGCTGATGTGACTCAAGACTCTGTAAAAGGCCTAGATTCTACTTCGTCTTCAATAACCCGCAAGGTGCAGGAGGTTCTTATTTCTTGCAAGGAAATAAAGCCAGATGATGGAAATGGACATGACAGACCAGAATTAAACCCAAAATGGATTAGTTTACTGACAATGGCAAAAGCTTGCTTGTCGACAATCTCTATTGAAG : ATACTTCTGGTACTGTGCGGAGAAGTAAGGACAACTTCAAAGAAAAGCTGAGAGAGCTTGGAGGACTTGATGCGGTCTTTGACGTGGCAAGAAGTTGTCATTCTGTTTTGGAG : GGTTGGTCAAAGAAAAGTTCACAGTCTATCGTAGATTCTAAAGATAATACGGCCATAGAAAGTCTGGTGCTACTCTTAAAATGTTTGAAGATCATGGAAAATGCAACCTTTCTTAGTACGGACAATCAG : AATCACTTGCTTCAAATGAAAGGAAAATTTGATAGTCTGAACTCCCCAAGGTCTTTTACAAAGCTAATCTTAAGTGTGATCAAGATTCTCTCCG : GGGCTTACCTGTGCAGAACTTCTTTTGGAAGTTCCAATGATGGAAAAGTCTGTGACCTTTCTGATGGAACTGCTCGTGCTTTAGAATTACGTTCACTATCAGATAAGAACG : ATGGAAGCTGTCAGATTTTGTGCATTGATTCCTCTACGACATGCTATACAAGTGAAGGTTCCTGTTCCCAGAAGAACTTGGGTGAAACTCAAACTGATCAGATTGGTTCATCCATATCTAGTTTAGAATTCGCTAGCACCTCCACGAGTGATTCTTGGCAGCTTAAATTGAGGATTGAATCTTCCAAATCTGGGTCATGTAGTGGAACCTCTGAGGACTTCAGTTTTGGGGTCAACAAGAATTCATCAAAAGTGAATTTTTTGATTGGTGATAATCAAAGAATTAATGGAGACAAGAGACTTGAACTTATGGAAGAGAGTCAAGATCCTTTTGCTTTTGATGATGATTTTGGACCTTCACGATGGGATTTAATGTCTACTAAGCAAAAGGTGCCGGAAACTCAAATTAGGCAGACATCACTTTTTGAACGTGATGATGAATACCTATCTCTTATTGTGCCAAGCCAGCAAGAGTCTAGTTGCCAGGAGAACAAACCACAGTCAAGTAGCAAGGAGAACAATCAATCTGGTCAGACCTCTTGTTCTTCTGTTGCAGATGACGAAATGTCGACCCTTCTGGCAGATTGCCTTCTCACAGCTGTTAAG : GTTCTGATGAACTTGACGAATGACAACCCTGTTGGCTGTCAGCAAATTGCTGCCGGTGGTGGACTAGAAGCTTTATCTGCTTTGATCGCCAGCCATTTTCCGTCCTTCAGCTTGCATTTGGATCGTAATGGGTTATCAAAATCAAGCGTTGGATCTGATAGTGATGGCCATCTCAATGATCAAGAGCTAGATTTTCTTGTTGCTATTTTGGGTTTGCTGGTCAATTTGGTAGAGAAGGATGGCTGCAACAG : GTCTAGACTTGCAGCTGCTAGTATTTCATTGCCTGGATCAGAAGGTTTGTTTAAGGGGGAGACTCAGACAGATGTTATCCCTCTGCTATGTGCAATCTTTCTGGAAAATCAAGGGGCTGGAGAGGCTGCTGGGGAAGGAAAATGTTTGCAATGG : GATGATGAAGATGCTGTACTACAGGGGGAGAAAGAAGCTGAAAAAATGATTATTGAAGCATATTCAGCTCTCCTTCTTGCCTTCCTTTCAACTGAGAG : CAAGAGCATACGGCAGGCAATCGCTGGTTACTTACCAGATCATAAATTGTCCATTCTTGTACCTGTGCTGGAGAGATTTGTG : GAATTCCACATGACACTGAACATGATATCGCCAGAGACTCATTCAACAGTGCTTGAAGTTATAGAATCTTGTAGGGTTAGGTGAGACTCTATTGTTTCCTTTTCCTTCCGTGTCTTTTCCTCGAAGATGGTAACAATGAGACTTTGTACAGCATAAACTACCTTTCCCTACAGCATTGGTGCATTAGAAATCCTATCTCAGGATTTGTGTGTCATGGCCTTTGTTTGTCTATGGTTTCCCTGGTCTTTATAGAAATATATTCTTCCCCCTATTTTCCAGCCAATTGTTTCACCATGTTTTGGTGTGGGCTGAGATACTTGTACATGAAGAAAGATTATGAATATGTATCACGGTTGTAATTTGTAGTAATTTTTTAGTGATGGTTTCTTTCTCTCTG</gDNA_template>
            <first_frame> S  N  L  Q  I  R  A  N  S  Q  H  T  F  Y  K  P  *  F  Q  V  P  N  Y  L  K  F  L  V  L  I  T  K  I  H  Q  Y  S  C  S  L  V  D  L  V  A  G  I  L  N  S  P  S  E  N  D  R  *  N  I  R  P  A  E  *  K  H  V  S  E  L  L  *  I  R  V  K  *  *  S  F  G  T  H  T  F  S  G  E  F  S  R  Y  L  Q  F  W  V  F  I  S  R  L  S  S  L  V  V  E  F  Q  *  F  R  S  I  R  C  R  L  I  S  R  V  S  R  I  V  D  F  A  V  K  E  G  G  *  G  F  G  F  *  G  S  *  W  G  F  V  E  T  Q  E  S  K  D  V  *  L  G  D  L  *  F  E  F  I  T  R  I  G  *  I  F  V  F  T  R  W  G  G  V  W  W  S  W  E  I  *  W  G  I  T  *  T  N  E  G  E  E  D  W  E  G  *  G  K  W  G  F  A  E  E  E  E  E  G  E  V  E  G  A  G  I  A  F  T  G  A  H  S  D  F  D  G  D  S  R  M  W  *  D  D  G  T  Y  G  *  G  E  F  C  V  G  W  F  E  E  R  A  A  C  E  N  Q  K  G  E  F  I  V  I  A  I  Y  M  W  N  S  S  A  A  S  P  F  A  G  S  R  :  D  G  K  N  N  N  *  Y  C  F  G  T  Q  L  *  *  L  T  *  Q  P  C  C  S  R  S  I  L  H  F  D  *  *   : W  R  R  *  P  S  S  *  F  T  Q  L  H  S  L  S  Y  K  I  V  K  T  S  C  C  S  C  F  R  S  K  G  S  N  Y  W  E  Q  T  F  G  D  A  L  R  C  *  C  D  S  R  L  C  K  R  P  R  F  Y  F  V  F  N  N  P  Q  G  A  G  G  S  Y  F  L  Q  G  N  K  A  R  *  W  K  W  T  *  Q  T  R  I  K  P  K  M  D  *  F  T  D  N  G  K  S  L  L  V  D  N  L  Y  *  R :   Y  F  W  Y  C  A  E  K  *  G  Q  L  Q  R  K  A  E  R  A  W  R  T  *  C  G  L  *  R  G  K  K  L  S  F  C  F  G   : G  L  V  K  E  K  F  T  V  Y  R  R  F  *  R  *  Y  G  H  R  K  S  G  A  T  L  K  M  F  E  D  H  G  K  C  N  L  S  *  Y  G  Q  S   : E  S  L  A  S  N  E  R  K  I  *  *  S  E  L  P  K  V  F  Y  K  A  N  L  K  C  D  Q  D  S  L  R :   G  L  P  V  Q  N  F  F  W  K  F  Q  *  W  K  S  L  *  P  F  *  W  N  C  S  C  F  R  I  T  F  T  I  R  *  E  R :   W  K  L  S  D  F  V  H  *  F  L  Y  D  M  L  Y  K  *  R  F  L  F  P  E  E  L  G  *  N  S  N  *  S  D  W  F  I  H  I  *  F  R  I  R  *  H  L  H  E  *  F  L  A  A  *  I  E  D  *  I  F  Q  I  W  V  M  *  W  N  L  *  G  L  Q  F  W  G  Q  Q  E  F  I  K  S  E  F  F  D  W  *  *  S  K  N  *  W  R  Q  E  T  *  T  Y  G  R  E  S  R  S  F  C  F  *  *  *  F  W  T  F  T  M  G  F  N  V  Y  *  A  K  G  A  G  N  S  N  *  A  D  I  T  F  *  T  *  *  *  I  P  I  S  Y  C  A  K  P  A  R  V  *  L  P  G  E  Q  T  T  V  K  *  Q  G  E  Q  S  I  W  S  D  L  L  F  F  C  C  R  *  R  N  V  D  P  S  G  R  L  P  S  H  S  C  *   : G  S  D  E  L  D  E  *  Q  P  C  W  L  S  A  N  C  C  R  W  W  T  R  S  F  I  C  F  D  R  Q  P  F  S  V  L  Q  L  A  F  G  S  *  W  V  I  K  I  K  R  W  I  *  *  *  W  P  S  Q  *  S  R  A  R  F  S  C  C  Y  F  G  F  A  G  Q  F  G  R  E  G  W  L  Q  Q  :  V  *  T  C  S  C  *  Y  F  I  A  W  I  R  R  F  V  *  G  G  D  S  D  R  C  Y  P  S  A  M  C  N  L  S  G  K  S  R  G  W  R  G  C  W  G  R  K  M  F  A  M   : G  *  *  R  C  C  T  T  G  G  E  R  S  *  K  N  D  Y  *  S  I  F  S  S  P  S  C  L  P  F  N  *  E  :  Q  E  H  T  A  G  N  R  W  L  L  T  R  S  *  I  V  H  S  C  T  C  A  G  E  I  C   : G  I  P  H  D  T  E  H  D  I  A  R  D  S  F  N  S  A  *  S  Y  R  I  L  *  G  *  V  R  L  Y  C  F  L  F  L  P  C  L  F  L  E  D  G  N  N  E  T  L  Y  S  I  N  Y  L  S  L  Q  H  W  C  I  R  N  P  I  S  G  F  V  C  H  G  L  C  L  S  M  V  S  L  V  F  I  E  I  Y  S  S  P  Y  F  P  A  N  C  F  T  M  F  W  C  G  L  R  Y  L  Y  M  K  K  D  Y  E  Y  V  S  R  L  *  F  V  V  I  F  *  *  W  F  L  S  L   </first_frame>
            <second_frame>  Q  I  F  K  S  E  Q  T  H  N  T  L  S  I  N  P  N  F  R  F  Q  I  T  S  N  F  W  F  *  *  R  K  Y  I  N  I  R  V  L  *  L  I  *  L  Q  E  F  *  I  L  R  R  K  M  I  V  R  T  Y  G  R  R  S  R  S  M  S  R  S  Y  S  E  S  G  L  N  D  E  V  S  E  H  T  L  S  Q  E  N  S  Q  D  I  Y  S  F  G  F  S  S  Q  D  S  V  H  W  S  S  N  F  N  N  S  D  P  Y  D  V  G  S  S  Q  G  C  Q  E  L  S  I  L  P  S  R  K  E  D  R  D  L  G  F  E  G  H  D  G  V  L  W  K  P  K  K  V  K  M  F  D  W  E  T  Y  S  L  N  S  S  Q  E  S  D  E  F  S  F  L  P  D  G  G  E  Y  G  G  L  G  K  F  D  G  G  L  H  E  P  M  K  V  K  K  T  G  K  G  K  E  N  G  V  L  Q  K  K  K  K  K  V  K  S  K  E  L  G  L  P  S  L  G  P  T  A  T  L  M  E  T  Q  E  C  G  E  M  M  E  H  M  D  E  V  N  F  A  L  D  G  L  R  K  G  Q  P  A  R  I  R  R  A  S  L  L  S  L  L  S  I  C  G  T  A  Q  Q  R  R  L  L  R  A  H  G :   M  A  K  T  I  I  D  T  V  L  G  L  S  F  D  D  S  P  S  N  L  A  A  A  G  L  F  Y  I  L  T  S  D  :  G  G  D  D  H  L  L  D  S  P  S  C  I  R  F  L  I  K  L  L  R  P  V  A  A  P  A  S  V  A  K  A  P  T  I  G  S  K  L  L  A  M  R  L  D  A  D  V  T  Q  D  S  V  K  G  L  D  S  T  S  S  S  I  T  R  K  V  Q  E  V  L  I  S  C  K  E  I  K  P  D  D  G  N  G  H  D  R  P  E  L  N  P  K  W  I  S  L  L  T  M  A  K  A  C  L  S  T  I  S  I  E   : D  T  S  G  T  V  R  R  S  K  D  N  F  K  E  K  L  R  E  L  G  G  L  D  A  V  F  D  V  A  R  S  C  H  S  V  L  E  :  G  W  S  K  K  S  S  Q  S  I  V  D  S  K  D  N  T  A  I  E  S  L  V  L  L  L  K  C  L  K  I  M  E  N  A  T  F  L  S  T  D  N  Q  :  N  H  L  L  Q  M  K  G  K  F  D  S  L  N  S  P  R  S  F  T  K  L  I  L  S  V  I  K  I  L  S   : G  A  Y  L  C  R  T  S  F  G  S  S  N  D  G  K  V  C  D  L  S  D  G  T  A  R  A  L  E  L  R  S  L  S  D  K  N   : D  G  S  C  Q  I  L  C  I  D  S  S  T  T  C  Y  T  S  E  G  S  C  S  Q  K  N  L  G  E  T  Q  T  D  Q  I  G  S  S  I  S  S  L  E  F  A  S  T  S  T  S  D  S  W  Q  L  K  L  R  I  E  S  S  K  S  G  S  C  S  G  T  S  E  D  F  S  F  G  V  N  K  N  S  S  K  V  N  F  L  I  G  D  N  Q  R  I  N  G  D  K  R  L  E  L  M  E  E  S  Q  D  P  F  A  F  D  D  D  F  G  P  S  R  W  D  L  M  S  T  K  Q  K  V  P  E  T  Q  I  R  Q  T  S  L  F  E  R  D  D  E  Y  L  S  L  I  V  P  S  Q  Q  E  S  S  C  Q  E  N  K  P  Q  S  S  S  K  E  N  N  Q  S  G  Q  T  S  C  S  S  V  A  D  D  E  M  S  T  L  L  A  D  C  L  L  T  A  V  K  :  V  L  M  N  L  T  N  D  N  P  V  G  C  Q  Q  I  A  A  G  G  G  L  E  A  L  S  A  L  I  A  S  H  F  P  S  F  S  L  H  L  D  R  N  G  L  S  K  S  S  V  G  S  D  S  D  G  H  L  N  D  Q  E  L  D  F  L  V  A  I  L  G  L  L  V  N  L  V  E  K  D  G  C  N  R :   S  R  L  A  A  A  S  I  S  L  P  G  S  E  G  L  F  K  G  E  T  Q  T  D  V  I  P  L  L  C  A  I  F  L  E  N  Q  G  A  G  E  A  A  G  E  G  K  C  L  Q  W  :  D  D  E  D  A  V  L  Q  G  E  K  E  A  E  K  M  I  I  E  A  Y  S  A  L  L  L  A  F  L  S  T  E  S :   K  S  I  R  Q  A  I  A  G  Y  L  P  D  H  K  L  S  I  L  V  P  V  L  E  R  F  V  :  E  F  H  M  T  L  N  M  I  S  P  E  T  H  S  T  V  L  E  V  I  E  S  C  R  V  R  *  D  S  I  V  S  F  S  F  R  V  F  S  S  K  M  V  T  M  R  L  C  T  A  *  T  T  F  P  Y  S  I  G  A  L  E  I  L  S  Q  D  L  C  V  M  A  F  V  C  L  W  F  P  W  S  L  *  K  Y  I  L  P  P  I  F  Q  P  I  V  S  P  C  F  G  V  G  *  D  T  C  T  *  R  K  I  M  N  M  Y  H  G  C  N  L  *  *  F  F  S  D  G  F  F  L  S  </second_frame>
            <third_frame>   K  S  S  N  Q  S  K  L  T  T  H  F  L  *  T  L  I  S  G  S  K  L  P  Q  I  F  G  F  N  N  E  N  T  S  I  F  V  F  F  S  *  S  S  C  R  N  F  E  F  S  V  G  K  *  S  L  E  H  T  A  G  G  V  E  A  C  L  G  A  T  L  N  Q  G  *  M  M  K  F  R  N  T  H  F  L  R  R  I  L  K  I  F  T  V  L  G  F  H  L  K  T  Q  F  T  G  R  R  I  S  I  I  Q  I  H  T  M  S  A  H  L  K  G  V  K  N  C  R  F  C  R  Q  G  R  R  I  G  I  W  V  L  R  V  M  M  G  F  C  G  N  P  R  K  *  R  C  L  I  G  R  L  I  V  *  I  H  H  K  N  R  M  N  F  R  F  Y  P  M  G  G  S  M  V  V  L  G  N  L  M  G  D  Y  M  N  Q  *  R  *  R  R  L  G  R  V  R  K  M  G  F  C  R  R  R  R  R  R  *  S  R  R  S  W  D  C  L  H  W  G  P  Q  R  L  *  W  R  L  K  N  V  V  R  *  W  N  I  W  M  R  *  I  L  R  W  M  V  *  G  K  G  S  L  R  E  S  E  G  R  V  Y  C  H  C  Y  L  Y  V  E  Q  L  S  S  V  A  F  C  G  L  T   : G  W  Q  K  Q  *  L  I  L  F  W  D  S  A  L  M  T  H  L  A  T  L  L  Q  Q  V  Y  S  T  F  *  L  V  M :   E  E  M  T  I  F  L  I  H  P  A  A  F  A  F  L  *  N  C  *  D  Q  L  L  L  L  L  P  *  Q  R  L  Q  L  L  G  A  N  F  W  R  C  A  *  M  L  M  *  L  K  T  L  *  K  A  *  I  L  L  R  L  Q  *  P  A  R  C  R  R  F  L  F  L  A  R  K  *  S  Q  M  M  E  M  D  M  T  D  Q  N  *  T  Q  N  G  L  V  Y  *  Q  W  Q  K  L  A  C  R  Q  S  L  L  K  :  I  L  L  V  L  C  G  E  V  R  T  T  S  K  K  S  *  E  S  L  E  D  L  M  R  S  L  T  W  Q  E  V  V  I  L  F  W  R :   V  G  Q  R  K  V  H  S  L  S  *  I  L  K  I  I  R  P  *  K  V  W  C  Y  S  *  N  V  *  R  S  W  K  M  Q  P  F  L  V  R  T  I  R :   I  T  C  F  K  *  K  E  N  L  I  V  *  T  P  Q  G  L  L  Q  S  *  S  *  V  *  S  R  F  S  P  :  G  L  T  C  A  E  L  L  L  E  V  P  M  M  E  K  S  V  T  F  L  M  E  L  L  V  L  *  N  Y  V  H  Y  Q  I  R  T  :  M  E  A  V  R  F  C  A  L  I  P  L  R  H  A  I  Q  V  K  V  P  V  P  R  R  T  W  V  K  L  K  L  I  R  L  V  H  P  Y  L  V  *  N  S  L  A  P  P  R  V  I  L  G  S  L  N  *  G  L  N  L  P  N  L  G  H  V  V  E  P  L  R  T  S  V  L  G  S  T  R  I  H  Q  K  *  I  F  *  L  V  I  I  K  E  L  M  E  T  R  D  L  N  L  W  K  R  V  K  I  L  L  L  L  M  M  I  L  D  L  H  D  G  I  *  C  L  L  S  K  R  C  R  K  L  K  L  G  R  H  H  F  L  N  V  M  M  N  T  Y  L  L  L  C  Q  A  S  K  S  L  V  A  R  R  T  N  H  S  Q  V  A  R  R  T  I  N  L  V  R  P  L  V  L  L  L  Q  M  T  K  C  R  P  F  W  Q  I  A  F  S  Q  L  L  R :   F  *  *  T  *  R  M  T  T  L  L  A  V  S  K  L  L  P  V  V  D  *  K  L  Y  L  L  *  S  P  A  I  F  R  P  S  A  C  I  W  I  V  M  G  Y  Q  N  Q  A  L  D  L  I  V  M  A  I  S  M  I  K  S  *  I  F  L  L  L  F  W  V  C  W  S  I  W  *  R  R  M  A  A  T   : G  L  D  L  Q  L  L  V  F  H  C  L  D  Q  K  V  C  L  R  G  R  L  R  Q  M  L  S  L  C  Y  V  Q  S  F  W  K  I  K  G  L  E  R  L  L  G  K  E  N  V  C  N  G :   M  M  K  M  L  Y  Y  R  G  R  K  K  L  K  K  *  L  L  K  H  I  Q  L  S  F  L  P  S  F  Q  L  R   : A  R  A  Y  G  R  Q  S  L  V  T  Y  Q  I  I  N  C  P  F  L  Y  L  C  W  R  D  L  W :   N  S  T  *  H  *  T  *  Y  R  Q  R  L  I  Q  Q  C  L  K  L  *  N  L  V  G  L  G  E  T  L  L  F  P  F  P  S  V  S  F  P  R  R  W  *  Q  *  D  F  V  Q  H  K  L  P  F  P  T  A  L  V  H  *  K  S  Y  L  R  I  C  V  S  W  P  L  F  V  Y  G  F  P  G  L  Y  R  N  I  F  F  P  L  F  S  S  Q  L  F  H  H  V  L  V  W  A  E  I  L  V  H  E  E  R  L  *  I  C  I  T  V  V  I  C  S  N  F  L  V  M  V  S  F  S  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0127N23.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="33960" stop="34678"/>
                    <exon start="36625" stop="36724"/>
                    <exon start="37396" stop="37729"/>
                    <exon start="38334" stop="38446"/>
                    <exon start="38869" stop="38997"/>
                    <exon start="39085" stop="39178"/>
                    <exon start="39321" stop="39431"/>
                    <exon start="40383" stop="40987"/>
                    <exon start="41242" stop="41492"/>
                    <exon start="42914" stop="43067"/>
                    <exon start="43603" stop="43700"/>
                    <exon start="43788" stop="43869"/>
                    <exon start="44119" stop="44202"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>2871</number_coding_nucleotides>
                  <number_encoded_amino_acids>957</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ILRRKMIVRTYGRRSRSMSRSYSESGLNDEVSEHTLSQENSQDIYSFGFSSQDSVHWSSNFNNSDPYDVGSSQGCQELSILPSRKEDRDLGFEGHDGVLWKPKKVKMFDWETYSLNSSQESDEFSFLPDGGEYGGLGKFDGGLHEPMKVKKTGKGKENGVLQKKKKKVKSKELGLPSLGPTATLMETQECGEMMEHMDEVNFALDGLRKGQPARIRRASLLSLLSICGTAQQRRLLRAHGMAKTIIDTVLGLSFDDSPSNLAAAGLFYILTSDGGDDHLLDSPSCIRFLIKLLRPVAAPASVAKAPTIGSKLLAMRLDADVTQDSVKGLDSTSSSITRKVQEVLISCKEIKPDDGNGHDRPELNPKWISLLTMAKACLSTISIEDTSGTVRRSKDNFKEKLRELGGLDAVFDVARSCHSVLEGWSKKSSQSIVDSKDNTAIESLVLLLKCLKIMENATFLSTDNQNHLLQMKGKFDSLNSPRSFTKLILSVIKILSGAYLCRTSFGSSNDGKVCDLSDGTARALELRSLSDKNDGSCQILCIDSSTTCYTSEGSCSQKNLGETQTDQIGSSISSLEFASTSTSDSWQLKLRIESSKSGSCSGTSEDFSFGVNKNSSKVNFLIGDNQRINGDKRLELMEESQDPFAFDDDFGPSRWDLMSTKQKVPETQIRQTSLFERDDEYLSLIVPSQQESSCQENKPQSSSKENNQSGQTSCSSVADDEMSTLLADCLLTAVKVLMNLTNDNPVGCQQIAAGGGLEALSALIASHFPSFSLHLDRNGLSKSSVGSDSDGHLNDQELDFLVAILGLLVNLVEKDGCNRSRLAAASISLPGSEGLFKGETQTDVIPLLCAIFLENQGAGEAAGEGKCLQWDDEDAVLQGEKEAEKMIIEAYSALLLAFLSTESKSIRQAIAGYLPDHKLSILVPVLERFVEFHMTLNMISPETHSTVLEVIESCRVR*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0127N23.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="44199" stop="44477"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>276</number_coding_nucleotides>
                  <number_encoded_amino_acids>92</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VRLYCFLFLPCLFLEDGNNETLYSINYLSLQHWCIRNPISGFVCHGLCLSMVSLVFIEIYSSPYFPANCFTMFWCGLRYLYMKKDYEYVSRL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="47380" PGL_stop="45304"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="47380" e_stop="47095"/>
            <exon e_start="46943" e_stop="46776"/>
            <exon e_start="46676" e_stop="46441"/>
            <exon e_start="45860" e_stop="45304"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.848" e_score="0.979"/>
          <exon-intron don_prob="0.945" acc_prob="0.999" e_score="0.982"/>
          <exon-intron don_prob="0.985" acc_prob="0.969" e_score="1.000"/>
          <exon-only e_score="0.944"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.979">
            <gDNA_exon_boundary e_start="47380" e_stop="47095" e_length="286"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.848">
            <gDNA_intron_boundary i_start="47094" i_stop="46944" i_length="151"/>
          </intron>
          <exon e_serial="2" e_score="0.982">
            <gDNA_exon_boundary e_start="46943" e_stop="46776" e_length="168"/>
          </exon>
          <intron i_serial="2" don_prob="0.945" acc_prob="0.999">
            <gDNA_intron_boundary i_start="46775" i_stop="46677" i_length="99"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="46676" e_stop="46441" e_length="236"/>
          </exon>
          <intron i_serial="3" don_prob="0.985" acc_prob="0.969">
            <gDNA_intron_boundary i_start="46440" i_stop="45861" i_length="580"/>
          </intron>
          <exon e_serial="4" e_score="0.944">
            <gDNA_exon_boundary e_start="45860" e_stop="45304" e_length="557"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47380" stop="47095"/>
              <exon start="46943" stop="46776"/>
              <exon start="46676" stop="46441"/>
              <exon start="45860" stop="45776"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U596614" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47376" stop="47190"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U596616" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47169" stop="47095"/>
              <exon start="46943" stop="46776"/>
              <exon start="46676" stop="46441"/>
              <exon start="45860" stop="45752"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U596617" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46629" stop="46441"/>
              <exon start="45860" stop="45304"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U596613" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGAAGAAATAGAGCACAAATACATTGAAGTGAATGGTCTAAAGCTCCATATAGCTGAAATTGGAAGTGGGTTTTCTCCAGTTGTGGTGTTCTTACATGGATTCCCTGAAATTTGGTATTCTTGGAGGTACCAGATGAAAGCTGTAGCTAAAGCGGGTTACAGAGCTATTGCACCCGATTACAGAGGATATGGGTTATCGGATCAACCAACCCAACCCGAGAAAACCACATTCCTCGATCTTGTCAGTGACCTCCTTGCACTTCTTGATGCTCTTAATATCTCTAAG : GTTTTTCTCGTTGGTAAAGACTTTGGATCTTTTGTCATTTCGTATTTTTCCATTCTCCACAAGGAGAGAGTCTCTGGATTTATTGTTATGGGGGTGCCATTTTTGCCTCCAAAACCTCTTGAGTTTAAAAAAGGCCTCCCTGAAGGATTCTATATTTCGAGATTTGGG : ATACCTGGGAGAGCTGAAGCTGATTTTGGTCGTCTTGACGCCAAAACAGTAGTGAGGAATGTATACATTCTTTTCTCCAGAAGTGAATTACCAATAGCCAATGAAGATCAGGAAATCATGGACATTGTGCAACCTTCAACTCCTCTGCCCCCTTGGTTCTCCGAGGAAGACCTGGCTGCGTATGGAGCTTTGTACGAAAAATCTGGATTCCGAACTGCATTGCAGGTTCCCTATAG : GTCACTGCATGAACAAGTCAACATAACAGATCCAACCGTTCACGTTCAAGCACTGTATATTAAGGGAGAGAAAGATTATTTCCTCAAATTTCCAGGCATCGAAGATTACATTAGTAGTGGAGTCCTCAAAAGTTTAGTCCCTAATCTGCAGATAGTTAACTTGCCAGAAGGAAACCATTTTGTTCAAGAACAACTACCTGACGAGGTTAATCAACTCGTGCTCGAATTTCTTACCAAAAATAGTAAGGTTCAGTAAGTCCTCATTGTTGTTGCTGCTCCGTCTACTAAGAACAGAAGCTCCAATAAGGCGTTGTTATTGTTGTTGTTGCTCTATCTACTAAGGAATAGAAGTTCAAATAAGTTGTTGTTTCAATTTTCGTTCAGTAAGTCCTAGTTGTGTTTTACATGTAATATTTTGCTGCAGTGACCCTGCAATTCCTATAAAAAGCAAGGCACTGAAAGGTGAAATTACCATGTTATGAAAGCTTTGTTCCATCTCTCTTTCTTTGCTATGTTATATTATGAATGTTAACTGATTACCTTAAAAGTAGAGATTT</gDNA_template>
            <first_frame> G  R  N  R  A  Q  I  H  *  S  E  W  S  K  A  P  Y  S  *  N  W  K  W  V  F  S  S  C  G  V  L  T  W  I  P  *  N  L  V  F  L  E  V  P  D  E  S  C  S  *  S  G  L  Q  S  Y  C  T  R  L  Q  R  I  W  V  I  G  S  T  N  P  T  R  E  N  H  I  P  R  S  C  Q  *  P  P  C  T  S  *  C  S  *  Y  L  *   : G  F  S  R  W  *  R  L  W  I  F  C  H  F  V  F  F  H  S  P  Q  G  E  S  L  W  I  Y  C  Y  G  G  A  I  F  A  S  K  T  S  *  V  *  K  R  P  P  *  R  I  L  Y  F  E  I  W   : D  T  W  E  S  *  S  *  F  W  S  S  *  R  Q  N  S  S  E  E  C  I  H  S  F  L  Q  K  *  I  T  N  S  Q  *  R  S  G  N  H  G  H  C  A  T  F  N  S  S  A  P  L  V  L  R  G  R  P  G  C  V  W  S  F  V  R  K  I  W  I  P  N  C  I  A  G  S  L  *  :  V  T  A  *  T  S  Q  H  N  R  S  N  R  S  R  S  S  T  V  Y  *  G  R  E  R  L  F  P  Q  I  S  R  H  R  R  L  H  *  *  W  S  P  Q  K  F  S  P  *  S  A  D  S  *  L  A  R  R  K  P  F  C  S  R  T  T  T  *  R  G  *  S  T  R  A  R  I  S  Y  Q  K  *  *  G  S  V  S  P  H  C  C  C  C  S  V  Y  *  E  Q  K  L  Q  *  G  V  V  I  V  V  V  A  L  S  T  K  E  *  K  F  K  *  V  V  V  S  I  F  V  Q  *  V  L  V  V  F  Y  M  *  Y  F  A  A  V  T  L  Q  F  L  *  K  A  R  H  *  K  V  K  L  P  C  Y  E  S  F  V  P  S  L  F  L  C  Y  V  I  L  *  M  L  T  D  Y  L  K  S  R  D   </first_frame>
            <second_frame>  E  E  I  E  H  K  Y  I  E  V  N  G  L  K  L  H  I  A  E  I  G  S  G  F  S  P  V  V  V  F  L  H  G  F  P  E  I  W  Y  S  W  R  Y  Q  M  K  A  V  A  K  A  G  Y  R  A  I  A  P  D  Y  R  G  Y  G  L  S  D  Q  P  T  Q  P  E  K  T  T  F  L  D  L  V  S  D  L  L  A  L  L  D  A  L  N  I  S  K  :  V  F  L  V  G  K  D  F  G  S  F  V  I  S  Y  F  S  I  L  H  K  E  R  V  S  G  F  I  V  M  G  V  P  F  L  P  P  K  P  L  E  F  K  K  G  L  P  E  G  F  Y  I  S  R  F  G  :  I  P  G  R  A  E  A  D  F  G  R  L  D  A  K  T  V  V  R  N  V  Y  I  L  F  S  R  S  E  L  P  I  A  N  E  D  Q  E  I  M  D  I  V  Q  P  S  T  P  L  P  P  W  F  S  E  E  D  L  A  A  Y  G  A  L  Y  E  K  S  G  F  R  T  A  L  Q  V  P  Y  R :   S  L  H  E  Q  V  N  I  T  D  P  T  V  H  V  Q  A  L  Y  I  K  G  E  K  D  Y  F  L  K  F  P  G  I  E  D  Y  I  S  S  G  V  L  K  S  L  V  P  N  L  Q  I  V  N  L  P  E  G  N  H  F  V  Q  E  Q  L  P  D  E  V  N  Q  L  V  L  E  F  L  T  K  N  S  K  V  Q  *  V  L  I  V  V  A  A  P  S  T  K  N  R  S  S  N  K  A  L  L  L  L  L  L  L  Y  L  L  R  N  R  S  S  N  K  L  L  F  Q  F  S  F  S  K  S  *  L  C  F  T  C  N  I  L  L  Q  *  P  C  N  S  Y  K  K  Q  G  T  E  R  *  N  Y  H  V  M  K  A  L  F  H  L  S  F  F  A  M  L  Y  Y  E  C  *  L  I  T  L  K  V  E  I  </second_frame>
            <third_frame>   K  K  *  S  T  N  T  L  K  *  M  V  *  S  S  I  *  L  K  L  E  V  G  F  L  Q  L  W  C  S  Y  M  D  S  L  K  F  G  I  L  G  G  T  R  *  K  L  *  L  K  R  V  T  E  L  L  H  P  I  T  E  D  M  G  Y  R  I  N  Q  P  N  P  R  K  P  H  S  S  I  L  S  V  T  S  L  H  F  L  M  L  L  I  S  L  R :   F  F  S  L  V  K  T  L  D  L  L  S  F  R  I  F  P  F  S  T  R  R  E  S  L  D  L  L  L  W  G  C  H  F  C  L  Q  N  L  L  S  L  K  K  A  S  L  K  D  S  I  F  R  D  L  G :   Y  L  G  E  L  K  L  I  L  V  V  L  T  P  K  Q  *  *  G  M  Y  T  F  F  S  P  E  V  N  Y  Q  *  P  M  K  I  R  K  S  W  T  L  C  N  L  Q  L  L  C  P  L  G  S  P  R  K  T  W  L  R  M  E  L  C  T  K  N  L  D  S  E  L  H  C  R  F  P  I   : G  H  C  M  N  K  S  T  *  Q  I  Q  P  F  T  F  K  H  C  I  L  R  E  R  K  I  I  S  S  N  F  Q  A  S  K  I  T  L  V  V  E  S  S  K  V  *  S  L  I  C  R  *  L  T  C  Q  K  E  T  I  L  F  K  N  N  Y  L  T  R  L  I  N  S  C  S  N  F  L  P  K  I  V  R  F  S  K  S  S  L  L  L  L  L  R  L  L  R  T  E  A  P  I  R  R  C  Y  C  C  C  C  S  I  Y  *  G  I  E  V  Q  I  S  C  C  F  N  F  R  S  V  S  P  S  C  V  L  H  V  I  F  C  C  S  D  P  A  I  P  I  K  S  K  A  L  K  G  E  I  T  M  L  *  K  L  C  S  I  S  L  S  L  L  C  Y  I  M  N  V  N  *  L  P  *  K  *  R  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0127N23.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="47379" stop="47095"/>
                    <exon start="46943" stop="46776"/>
                    <exon start="46676" stop="46441"/>
                    <exon start="45860" stop="45605"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>942</number_coding_nucleotides>
                  <number_encoded_amino_acids>314</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EEIEHKYIEVNGLKLHIAEIGSGFSPVVVFLHGFPEIWYSWRYQMKAVAKAGYRAIAPDYRGYGLSDQPTQPEKTTFLDLVSDLLALLDALNISKVFLVGKDFGSFVISYFSILHKERVSGFIVMGVPFLPPKPLEFKKGLPEGFYISRFGIPGRAEADFGRLDAKTVVRNVYILFSRSELPIANEDQEIMDIVQPSTPLPPWFSEEDLAAYGALYEKSGFRTALQVPYRSLHEQVNITDPTVHVQALYIKGEKDYFLKFPGIEDYISSGVLKSLVPNLQIVNLPEGNHFVQEQLPDEVNQLVLEFLTKNSKVQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="54919" PGL_stop="57638"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="54919" e_stop="54957"/>
            <exon e_start="55483" e_stop="57638"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.992" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="54919" e_stop="54957" e_length="39"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.992">
            <gDNA_intron_boundary i_start="54958" i_stop="55482" i_length="525"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="55483" e_stop="57638" e_length="2156"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54919" stop="54957"/>
              <exon start="55483" stop="57638"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U568786" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CATTTCTCTCCGGCGAACTCCTTATCGGCGAGATCAATT : CAAGTGGCTGAGTGGAATAGAAGACCATGGAAGAAGAGTTAACTGATTTACTGTTGGAGGCTGCTGGTAGAACAAATACTGGTGGAAGGAATCGTCCACCTCATTCATCTAAAAGACATCACAAGAGTTCATATTCTGATGATGGAAGTGATTCCAGGGATGATGACTCTGATGATGGTCGTGGGTATTCAGGTCGAAAGCTTTCTGGTTCACAAGTTCCTCTCAAGAAGAGATTGGACCCTCAAGAAAGAGATGATGATCATAGCAGCCATGGAGAAGGCAATGATGGAGATGGTTATGGCAATGAGAGTGATGATGATTCTATTGGCAGTGATCTTTACAAGGACGATGATGACCGGCAAAAGCTTGCTCAGATGACTGAACTGGAAAGGGAAATGATATTGACTGATCGTGCAGCGAAGAAATCTGACAGGAGTCTGCATGACAAAATGATCAAGGATCGGGCCCAACCAAGGAAACAAAGCTCACCTCCTTCACATTCTCGTGGCATGCGCTCATCAACAAGAGCTTTGGATAGGGCAGCTGACAGAGATGATGCATTGAATGAGATACGAGCAAAACGAGCAAGACAGCAGCAGGATCCCGAGGGTCAATTCAAGCTGAGGGATGCAGCTAGAAAAGGTTCTGGAAGCAGGGGCTATTCACCTATCAAACGTAGAAGTTTTACAGCTGCATCTCTAGGTAGCAGTCCTACCAGGGGAGAAAGTGATTCACATAGTAATGAGGGAGATTCATCAGCTGATGATGGAATGGATGACAGTGATGATGACAAGTCATCACCGGAGTCACAGTTGCCAACATTTGAGGATATAAAAGAAATCTCTATTCGTCGTTCAAAACTGGCAAAATGGTTTATGGAGCCCTTCTTTGATGAGTTAATTGTGGGTTGCTTTGTAAGAGTTGGCATTGGGAGGTCAAGGTCTGGTCCTATCTATAGGCTCTGTGTGGTCCGCAATGTTGATGCTTCAGATCCTAATCGACAATACAAGCTAGAAAATAAAACCACATCCAAATTTCTAAATGTTGTTTGGGGCAATGAAAACTCTGCTGCTAGGTGGCAGATGGCTATGATTTCAGACTCTCCTCCTCTGAGGGATGAGTTTGATCAGTGGGTAAGGGAAGTAGAACGAAGTGGTGGTCGTATGCCTAGTAAGCAAGATGTGTTGGAAAAAAAAGAGGCCATACAGAAATCTAACACATTTGTTTACTCTGCTGACACTGTAAAGCAGATGTTGCAGCAGAAAAAATCTGCAACATGGAGGCCACTTAATGTTGCTGCTGAGAAGGATCGTTTGAGAAGGGATATGGAAGTGGCCAAAATGAAGAATGACGAAGCAGAAGTGGAGAGGATTAAGGCAAGACTGCAGGAACTGGAGGATAGCAGGAAGGTTCAAGAGAAAGATGACAAGGCCCGCAGGCTGGCTGAGATGAACCGGAAGAATAGGGTCGAGAATTTCAAAAATGCATCAGAACTCAGACCAGTGAATCAACTGTTGAAAGCTGGTGAGGCTGGGTATGATCCCTTCTCTAGAAGGTGGACTAGGTCTACAAATTATTTTGCAAAAGGTGCATCCAATGGTGAAGCTGCTGCAGCAGCAGCATTGGCAGCTGAAGATAACAATGGGGCTGGTGGAACTGCTGACGGAGGAATGGCAGCTACAGCAGCAGCCTTGCAGGCTGCAGCAGGCGCTGGGAAGTTGGTGGACACAAATGCTCCTGTAGATCAAGGAACAGAATCAAATACGCTACATGATTTCGATCTGCCTATCTCGTTGGCTGTGCTTCAGAAGTTTGGAGGGTCTCAAGGAGGCCAAGCAGGATTTATGGCTCGCAAACAGAGGATAGAAGCAACTGTTGGATGTAGCGTTCCGGAGAACGATGGCAGAAGACATGCACTAACTTTAAGTGTTAGTGACTACAAGAGAAGGAGAGGACTCCTTTGAGATTTACTGCTTTTGTTGTTTAGCCAAATGAATTGTTGTTACTGGGGATTCATGTACTAGCTGTGAATTAAGAGTACAGTTACTGCTATATTAAAATATGTTGAGACTTTTCTTGAATTTATGCTTCTATAGCAAAGACCTGGTTAACCAGGGGTCTTTTAAGCTTTAATGAGAAAAGCACTCCTTATTATT</gDNA_template>
            <first_frame> H  F  S  P  A  N  S  L  S  A  R  S  I  :  Q  V  A  E  W  N  R  R  P  W  K  K  S  *  L  I  Y  C  W  R  L  L  V  E  Q  I  L  V  E  G  I  V  H  L  I  H  L  K  D  I  T  R  V  H  I  L  M  M  E  V  I  P  G  M  M  T  L  M  M  V  V  G  I  Q  V  E  S  F  L  V  H  K  F  L  S  R  R  D  W  T  L  K  K  E  M  M  I  I  A  A  M  E  K  A  M  M  E  M  V  M  A  M  R  V  M  M  I  L  L  A  V  I  F  T  R  T  M  M  T  G  K  S  L  L  R  *  L  N  W  K  G  K  *  Y  *  L  I  V  Q  R  R  N  L  T  G  V  C  M  T  K  *  S  R  I  G  P  N  Q  G  N  K  A  H  L  L  H  I  L  V  A  C  A  H  Q  Q  E  L  W  I  G  Q  L  T  E  M  M  H  *  M  R  Y  E  Q  N  E  Q  D  S  S  R  I  P  R  V  N  S  S  *  G  M  Q  L  E  K  V  L  E  A  G  A  I  H  L  S  N  V  E  V  L  Q  L  H  L  *  V  A  V  L  P  G  E  K  V  I  H  I  V  M  R  E  I  H  Q  L  M  M  E  W  M  T  V  M  M  T  S  H  H  R  S  H  S  C  Q  H  L  R  I  *  K  K  S  L  F  V  V  Q  N  W  Q  N  G  L  W  S  P  S  L  M  S  *  L  W  V  A  L  *  E  L  A  L  G  G  Q  G  L  V  L  S  I  G  S  V  W  S  A  M  L  M  L  Q  I  L  I  D  N  T  S  *  K  I  K  P  H  P  N  F  *  M  L  F  G  A  M  K  T  L  L  L  G  G  R  W  L  *  F  Q  T  L  L  L  *  G  M  S  L  I  S  G  *  G  K  *  N  E  V  V  V  V  C  L  V  S  K  M  C  W  K  K  K  R  P  Y  R  N  L  T  H  L  F  T  L  L  T  L  *  S  R  C  C  S  R  K  N  L  Q  H  G  G  H  L  M  L  L  L  R  R  I  V  *  E  G  I  W  K  W  P  K  *  R  M  T  K  Q  K  W  R  G  L  R  Q  D  C  R  N  W  R  I  A  G  R  F  K  R  K  M  T  R  P  A  G  W  L  R  *  T  G  R  I  G  S  R  I  S  K  M  H  Q  N  S  D  Q  *  I  N  C  *  K  L  V  R  L  G  M  I  P  S  L  E  G  G  L  G  L  Q  I  I  L  Q  K  V  H  P  M  V  K  L  L  Q  Q  Q  H  W  Q  L  K  I  T  M  G  L  V  E  L  L  T  E  E  W  Q  L  Q  Q  Q  P  C  R  L  Q  Q  A  L  G  S  W  W  T  Q  M  L  L  *  I  K  E  Q  N  Q  I  R  Y  M  I  S  I  C  L  S  R  W  L  C  F  R  S  L  E  G  L  K  E  A  K  Q  D  L  W  L  A  N  R  G  *  K  Q  L  L  D  V  A  F  R  R  T  M  A  E  D  M  H  *  L  *  V  L  V  T  T  R  E  G  E  D  S  F  E  I  Y  C  F  C  C  L  A  K  *  I  V  V  T  G  D  S  C  T  S  C  E  L  R  V  Q  L  L  L  Y  *  N  M  L  R  L  F  L  N  L  C  F  Y  S  K  D  L  V  N  Q  G  S  F  K  L  *  *  E  K  H  S  L  L   </first_frame>
            <second_frame>  I  S  L  R  R  T  P  Y  R  R  D  Q  F :   K  W  L  S  G  I  E  D  H  G  R  R  V  N  *  F  T  V  G  G  C  W  *  N  K  Y  W  W  K  E  S  S  T  S  F  I  *  K  T  S  Q  E  F  I  F  *  *  W  K  *  F  Q  G  *  *  L  *  *  W  S  W  V  F  R  S  K  A  F  W  F  T  S  S  S  Q  E  E  I  G  P  S  R  K  R  *  *  S  *  Q  P  W  R  R  Q  *  W  R  W  L  W  Q  *  E  *  *  *  F  Y  W  Q  *  S  L  Q  G  R  *  *  P  A  K  A  C  S  D  D  *  T  G  K  G  N  D  I  D  *  S  C  S  E  E  I  *  Q  E  S  A  *  Q  N  D  Q  G  S  G  P  T  K  E  T  K  L  T  S  F  T  F  S  W  H  A  L  I  N  K  S  F  G  *  G  S  *  Q  R  *  C  I  E  *  D  T  S  K  T  S  K  T  A  A  G  S  R  G  S  I  Q  A  E  G  C  S  *  K  R  F  W  K  Q  G  L  F  T  Y  Q  T  *  K  F  Y  S  C  I  S  R  *  Q  S  Y  Q  G  R  K  *  F  T  *  *  *  G  R  F  I  S  *  *  W  N  G  *  Q  *  *  *  Q  V  I  T  G  V  T  V  A  N  I  *  G  Y  K  R  N  L  Y  S  S  F  K  T  G  K  M  V  Y  G  A  L  L  *  *  V  N  C  G  L  L  C  K  S  W  H  W  E  V  K  V  W  S  Y  L  *  A  L  C  G  P  Q  C  *  C  F  R  S  *  S  T  I  Q  A  R  K  *  N  H  I  Q  I  S  K  C  C  L  G  Q  *  K  L  C  C  *  V  A  D  G  Y  D  F  R  L  S  S  S  E  G  *  V  *  S  V  G  K  G  S  R  T  K  W  W  S  Y  A  *  *  A  R  C  V  G  K  K  R  G  H  T  E  I  *  H  I  C  L  L  C  *  H  C  K  A  D  V  A  A  E  K  I  C  N  M  E  A  T  *  C  C  C  *  E  G  S  F  E  K  G  Y  G  S  G  Q  N  E  E  *  R  S  R  S  G  E  D  *  G  K  T  A  G  T  G  G  *  Q  E  G  S  R  E  R  *  Q  G  P  Q  A  G  *  D  E  P  E  E  *  G  R  E  F  Q  K  C  I  R  T  Q  T  S  E  S  T  V  E  S  W  *  G  W  V  *  S  L  L  *  K  V  D  *  V  Y  K  L  F  C  K  R  C  I  Q  W  *  S  C  C  S  S  S  I  G  S  *  R  *  Q  W  G  W  W  N  C  *  R  R  N  G  S  Y  S  S  S  L  A  G  C  S  R  R  W  E  V  G  G  H  K  C  S  C  R  S  R  N  R  I  K  Y  A  T  *  F  R  S  A  Y  L  V  G  C  A  S  E  V  W  R  V  S  R  R  P  S  R  I  Y  G  S  Q  T  E  D  R  S  N  C  W  M  *  R  S  G  E  R  W  Q  K  T  C  T  N  F  K  C  *  *  L  Q  E  K  E  R  T  P  L  R  F  T  A  F  V  V  *  P  N  E  L  L  L  L  G  I  H  V  L  A  V  N  *  E  Y  S  Y  C  Y  I  K  I  C  *  D  F  S  *  I  Y  A  S  I  A  K  T  W  L  T  R  G  L  L  S  F  N  E  K  S  T  P  Y  Y  </second_frame>
            <third_frame>   F  L  S  G  E  L  L  I  G  E  I  N   : S  S  G  *  V  E  *  K  T  M  E  E  E  L  T  D  L  L  L  E  A  A  G  R  T  N  T  G  G  R  N  R  P  P  H  S  S  K  R  H  H  K  S  S  Y  S  D  D  G  S  D  S  R  D  D  D  S  D  D  G  R  G  Y  S  G  R  K  L  S  G  S  Q  V  P  L  K  K  R  L  D  P  Q  E  R  D  D  D  H  S  S  H  G  E  G  N  D  G  D  G  Y  G  N  E  S  D  D  D  S  I  G  S  D  L  Y  K  D  D  D  D  R  Q  K  L  A  Q  M  T  E  L  E  R  E  M  I  L  T  D  R  A  A  K  K  S  D  R  S  L  H  D  K  M  I  K  D  R  A  Q  P  R  K  Q  S  S  P  P  S  H  S  R  G  M  R  S  S  T  R  A  L  D  R  A  A  D  R  D  D  A  L  N  E  I  R  A  K  R  A  R  Q  Q  Q  D  P  E  G  Q  F  K  L  R  D  A  A  R  K  G  S  G  S  R  G  Y  S  P  I  K  R  R  S  F  T  A  A  S  L  G  S  S  P  T  R  G  E  S  D  S  H  S  N  E  G  D  S  S  A  D  D  G  M  D  D  S  D  D  D  K  S  S  P  E  S  Q  L  P  T  F  E  D  I  K  E  I  S  I  R  R  S  K  L  A  K  W  F  M  E  P  F  F  D  E  L  I  V  G  C  F  V  R  V  G  I  G  R  S  R  S  G  P  I  Y  R  L  C  V  V  R  N  V  D  A  S  D  P  N  R  Q  Y  K  L  E  N  K  T  T  S  K  F  L  N  V  V  W  G  N  E  N  S  A  A  R  W  Q  M  A  M  I  S  D  S  P  P  L  R  D  E  F  D  Q  W  V  R  E  V  E  R  S  G  G  R  M  P  S  K  Q  D  V  L  E  K  K  E  A  I  Q  K  S  N  T  F  V  Y  S  A  D  T  V  K  Q  M  L  Q  Q  K  K  S  A  T  W  R  P  L  N  V  A  A  E  K  D  R  L  R  R  D  M  E  V  A  K  M  K  N  D  E  A  E  V  E  R  I  K  A  R  L  Q  E  L  E  D  S  R  K  V  Q  E  K  D  D  K  A  R  R  L  A  E  M  N  R  K  N  R  V  E  N  F  K  N  A  S  E  L  R  P  V  N  Q  L  L  K  A  G  E  A  G  Y  D  P  F  S  R  R  W  T  R  S  T  N  Y  F  A  K  G  A  S  N  G  E  A  A  A  A  A  A  L  A  A  E  D  N  N  G  A  G  G  T  A  D  G  G  M  A  A  T  A  A  A  L  Q  A  A  A  G  A  G  K  L  V  D  T  N  A  P  V  D  Q  G  T  E  S  N  T  L  H  D  F  D  L  P  I  S  L  A  V  L  Q  K  F  G  G  S  Q  G  G  Q  A  G  F  M  A  R  K  Q  R  I  E  A  T  V  G  C  S  V  P  E  N  D  G  R  R  H  A  L  T  L  S  V  S  D  Y  K  R  R  R  G  L  L  *  D  L  L  L  L  L  F  S  Q  M  N  C  C  Y  W  G  F  M  Y  *  L  *  I  K  S  T  V  T  A  I  L  K  Y  V  E  T  F  L  E  F  M  L  L  *  Q  R  P  G  *  P  G  V  F  *  A  L  M  R  K  A  L  L  I  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0127N23.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="55503" stop="57446"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1941</number_coding_nucleotides>
                  <number_encoded_amino_acids>647</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KTMEEELTDLLLEAAGRTNTGGRNRPPHSSKRHHKSSYSDDGSDSRDDDSDDGRGYSGRKLSGSQVPLKKRLDPQERDDDHSSHGEGNDGDGYGNESDDDSIGSDLYKDDDDRQKLAQMTELEREMILTDRAAKKSDRSLHDKMIKDRAQPRKQSSPPSHSRGMRSSTRALDRAADRDDALNEIRAKRARQQQDPEGQFKLRDAARKGSGSRGYSPIKRRSFTAASLGSSPTRGESDSHSNEGDSSADDGMDDSDDDKSSPESQLPTFEDIKEISIRRSKLAKWFMEPFFDELIVGCFVRVGIGRSRSGPIYRLCVVRNVDASDPNRQYKLENKTTSKFLNVVWGNENSAARWQMAMISDSPPLRDEFDQWVREVERSGGRMPSKQDVLEKKEAIQKSNTFVYSADTVKQMLQQKKSATWRPLNVAAEKDRLRRDMEVAKMKNDEAEVERIKARLQELEDSRKVQEKDDKARRLAEMNRKNRVENFKNASELRPVNQLLKAGEAGYDPFSRRWTRSTNYFAKGASNGEAAAAAALAAEDNNGAGGTADGGMAATAAALQAAAGAGKLVDTNAPVDQGTESNTLHDFDLPISLAVLQKFGGSQGGQAGFMARKQRIEATVGCSVPENDGRRHALTLSVSDYKRRRGLL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="62186" PGL_stop="63926"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="62186" e_stop="63926"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="62186" e_stop="63926" e_length="1741"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62186" stop="63926"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U564723" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACAAAACAGGGCTCAAAACCCAAGAACATTTTTGGCTACTGAAAATTTCCAAAAAGTACTAAAAAAAGACATCTTTTTTCAATTTTACTGCACTTTTTTGCCGCCTCCATCACTGAAAAAATGTTGTTCAACTTCCTCTACTATCATCTTCATCACTTTCTCATAGCTGAAAATTGCTTCAGAAAATGAAAAAGGAGACATTTTTAAATTTCCAAGAAAAGACCATGGATGGTGTCATTAAGAGGAGGTCTTTATATGCAATTGGTTCTTGTTTTCTGCTTTTTCTCTTAGCTTACAACAGTTCCACTGTGTTCTATGTTCAAGTCCCTGTTCCAGGGAACTCTTCGCCGGAGATTTCAAGTTTTTTAACTGAAAATGTCGCCAGAAAATCAAGAAAGTTGGTTTCTTTATCTACTTCAGCTAAACGTTCATCCTCTGCGATATATGCTGTAAAAGAAGAAACCCCACTTGTAAAGCCGAACACCCGGTTGATAATTTCCCGGAAAAATCCAAACATGGTGGGTTTTTCATATGATTCAGAGGCTTATCAACCTAGAAGAAGGAAAAAGAAGAAGTCTTTGGTGAAAGGGGACAGAATCAATGTGTTTTCAATGAGAATGAAGGAGTTTTTTGGTTCTAAAGCATCCAATTCTTCTTGTAAGTTTCGATTTTTCATGACTTGGATTTCTTCCATTGAATCTTTTGGTGAAAGGGAACTGTTTGCTGTGGAGAGTCTGTTTAAGGCACACCCAAATGGCTGTTTGGTCATTATGTCTACTTCAATGGATTCTCCAAGAGGAATGCAAGTTTTAAACCCTTTCTTGGAGAAAGGATTAAGGGCAACTGCAATATCACCTGATTTTATGTACTTGTTTAAAAATACTATTGCTCAAGCCTGGATTGATAACTTAATGAAGGGTAATATAGACCCAGGGGAAGTTTCTTTAGGTCAGAATCTCTCAAATTTGTTAAGACTTGGTTTACTGTATAAGTTTGGTGGGATTTATTTAGATACTGATGTTATAGTGTTGAAGAGTTTTGGGAAGCTAAGGAATGTTATTGGGGCTCAAACTATTGATGTTGAAACAAGAAATTGGAGTAGGTTAAATAATGCTGTAATGATTTTTGACAAGAGGCATCCTTTGTTGTACAAGTTTATTGAAGAATTTGCACTTACATTTGATGGGAACAAATGGGGTCATAATGGTCCTTATTTGGTTTCAAGGGTTGTGTCAAGGGTAAGTGGAAGAGATGGATACAATTTCACTGTTTTGCCCCCAATGGCTTTTTATCCAGTTGATTGGAATAGGATTGGTAGTCTATTTCTTGGGCCGAGGAACGAGACTCAGTCGAAATGGTTGCTCTTGAAACTCCAGCAAATTCAGAGTGGAAGTTTGGCAGTGCATCTTTGGAACAAGCAAAGTAGAGAACTTGAGGTTGAAGAAGGAAGCATAATTCAACATATAATGTCAGATTGTTGTGTTTTCTGCAATTCTTACTCATCAAAGTTGTAAGTATACACCACGTAAAATCAGCGTCAGCGTGTTTTATTCTTCATTAATTGTTGTAGGATAATGGACCACCTAAGCTCATTACATAGGTTGTCTTGAAGAAATTAGGTGGTACAGAAATAATGCAGGATCCATGTATTCTACTTCATTGTCGATGTGATTGAACAAATTATACAAAGATAGAAAAGCAGAATTATTGCTAAGTTCCCATTGACTGAAATGCTATTGGC</gDNA_template>
            <first_frame> T  K  Q  G  S  K  P  K  N  I  F  G  Y  *  K  F  P  K  S  T  K  K  R  H  L  F  S  I  L  L  H  F  F  A  A  S  I  T  E  K  M  L  F  N  F  L  Y  Y  H  L  H  H  F  L  I  A  E  N  C  F  R  K  *  K  R  R  H  F  *  I  S  K  K  R  P  W  M  V  S  L  R  G  G  L  Y  M  Q  L  V  L  V  F  C  F  F  S  *  L  T  T  V  P  L  C  S  M  F  K  S  L  F  Q  G  T  L  R  R  R  F  Q  V  F  *  L  K  M  S  P  E  N  Q  E  S  W  F  L  Y  L  L  Q  L  N  V  H  P  L  R  Y  M  L  *  K  K  K  P  H  L  *  S  R  T  P  G  *  *  F  P  G  K  I  Q  T  W  W  V  F  H  M  I  Q  R  L  I  N  L  E  E  G  K  R  R  S  L  W  *  K  G  T  E  S  M  C  F  Q  *  E  *  R  S  F  L  V  L  K  H  P  I  L  L  V  S  F  D  F  S  *  L  G  F  L  P  L  N  L  L  V  K  G  N  C  L  L  W  R  V  C  L  R  H  T  Q  M  A  V  W  S  L  C  L  L  Q  W  I  L  Q  E  E  C  K  F  *  T  L  S  W  R  K  D  *  G  Q  L  Q  Y  H  L  I  L  C  T  C  L  K  I  L  L  L  K  P  G  L  I  T  *  *  R  V  I  *  T  Q  G  K  F  L  *  V  R  I  S  Q  I  C  *  D  L  V  Y  C  I  S  L  V  G  F  I  *  I  L  M  L  *  C  *  R  V  L  G  S  *  G  M  L  L  G  L  K  L  L  M  L  K  Q  E  I  G  V  G  *  I  M  L  *  *  F  L  T  R  G  I  L  C  C  T  S  L  L  K  N  L  H  L  H  L  M  G  T  N  G  V  I  M  V  L  I  W  F  Q  G  L  C  Q  G  *  V  E  E  M  D  T  I  S  L  F  C  P  Q  W  L  F  I  Q  L  I  G  I  G  L  V  V  Y  F  L  G  R  G  T  R  L  S  R  N  G  C  S  *  N  S  S  K  F  R  V  E  V  W  Q  C  I  F  G  T  S  K  V  E  N  L  R  L  K  K  E  A  *  F  N  I  *  C  Q  I  V  V  F  S  A  I  L  T  H  Q  S  C  K  Y  T  P  R  K  I  S  V  S  V  F  Y  S  S  L  I  V  V  G  *  W  T  T  *  A  H  Y  I  G  C  L  E  E  I  R  W  Y  R  N  N  A  G  S  M  Y  S  T  S  L  S  M  *  L  N  K  L  Y  K  D  R  K  A  E  L  L  L  S  S  H  *  L  K  C  Y  W  </first_frame>
            <second_frame>  Q  N  R  A  Q  N  P  R  T  F  L  A  T  E  N  F  Q  K  V  L  K  K  D  I  F  F  Q  F  Y  C  T  F  L  P  P  P  S  L  K  K  C  C  S  T  S  S  T  I  I  F  I  T  F  S  *  L  K  I  A  S  E  N  E  K  G  D  I  F  K  F  P  R  K  D  H  G  W  C  H  *  E  E  V  F  I  C  N  W  F  L  F  S  A  F  S  L  S  L  Q  Q  F  H  C  V  L  C  S  S  P  C  S  R  E  L  F  A  G  D  F  K  F  F  N  *  K  C  R  Q  K  I  K  K  V  G  F  F  I  Y  F  S  *  T  F  I  L  C  D  I  C  C  K  R  R  N  P  T  C  K  A  E  H  P  V  D  N  F  P  E  K  S  K  H  G  G  F  F  I  *  F  R  G  L  S  T  *  K  K  E  K  E  E  V  F  G  E  R  G  Q  N  Q  C  V  F  N  E  N  E  G  V  F  W  F  *  S  I  Q  F  F  L  *  V  S  I  F  H  D  L  D  F  F  H  *  I  F  W  *  K  G  T  V  C  C  G  E  S  V  *  G  T  P  K  W  L  F  G  H  Y  V  Y  F  N  G  F  S  K  R  N  A  S  F  K  P  F  L  G  E  R  I  K  G  N  C  N  I  T  *  F  Y  V  L  V  *  K  Y  Y  C  S  S  L  D  *  *  L  N  E  G  *  Y  R  P  R  G  S  F  F  R  S  E  S  L  K  F  V  K  T  W  F  T  V  *  V  W  W  D  L  F  R  Y  *  C  Y  S  V  E  E  F  W  E  A  K  E  C  Y  W  G  S  N  Y  *  C  *  N  K  K  L  E  *  V  K  *  C  C  N  D  F  *  Q  E  A  S  F  V  V  Q  V  Y  *  R  I  C  T  Y  I  *  W  E  Q  M  G  S  *  W  S  L  F  G  F  K  G  C  V  K  G  K  W  K  R  W  I  Q  F  H  C  F  A  P  N  G  F  L  S  S  *  L  E  *  D  W  *  S  I  S  W  A  E  E  R  D  S  V  E  M  V  A  L  E  T  P  A  N  S  E  W  K  F  G  S  A  S  L  E  Q  A  K  *  R  T  *  G  *  R  R  K  H  N  S  T  Y  N  V  R  L  L  C  F  L  Q  F  L  L  I  K  V  V  S  I  H  H  V  K  S  A  S  A  C  F  I  L  H  *  L  L  *  D  N  G  P  P  K  L  I  T  *  V  V  L  K  K  L  G  G  T  E  I  M  Q  D  P  C  I  L  L  H  C  R  C  D  *  T  N  Y  T  K  I  E  K  Q  N  Y  C  *  V  P  I  D  *  N  A  I  G </second_frame>
            <third_frame>   K  T  G  L  K  T  Q  E  H  F  W  L  L  K  I  S  K  K  Y  *  K  K  T  S  F  F  N  F  T  A  L  F  C  R  L  H  H  *  K  N  V  V  Q  L  P  L  L  S  S  S  S  L  S  H  S  *  K  L  L  Q  K  M  K  K  E  T  F  L  N  F  Q  E  K  T  M  D  G  V  I  K  R  R  S  L  Y  A  I  G  S  C  F  L  L  F  L  L  A  Y  N  S  S  T  V  F  Y  V  Q  V  P  V  P  G  N  S  S  P  E  I  S  S  F  L  T  E  N  V  A  R  K  S  R  K  L  V  S  L  S  T  S  A  K  R  S  S  S  A  I  Y  A  V  K  E  E  T  P  L  V  K  P  N  T  R  L  I  I  S  R  K  N  P  N  M  V  G  F  S  Y  D  S  E  A  Y  Q  P  R  R  R  K  K  K  K  S  L  V  K  G  D  R  I  N  V  F  S  M  R  M  K  E  F  F  G  S  K  A  S  N  S  S  C  K  F  R  F  F  M  T  W  I  S  S  I  E  S  F  G  E  R  E  L  F  A  V  E  S  L  F  K  A  H  P  N  G  C  L  V  I  M  S  T  S  M  D  S  P  R  G  M  Q  V  L  N  P  F  L  E  K  G  L  R  A  T  A  I  S  P  D  F  M  Y  L  F  K  N  T  I  A  Q  A  W  I  D  N  L  M  K  G  N  I  D  P  G  E  V  S  L  G  Q  N  L  S  N  L  L  R  L  G  L  L  Y  K  F  G  G  I  Y  L  D  T  D  V  I  V  L  K  S  F  G  K  L  R  N  V  I  G  A  Q  T  I  D  V  E  T  R  N  W  S  R  L  N  N  A  V  M  I  F  D  K  R  H  P  L  L  Y  K  F  I  E  E  F  A  L  T  F  D  G  N  K  W  G  H  N  G  P  Y  L  V  S  R  V  V  S  R  V  S  G  R  D  G  Y  N  F  T  V  L  P  P  M  A  F  Y  P  V  D  W  N  R  I  G  S  L  F  L  G  P  R  N  E  T  Q  S  K  W  L  L  L  K  L  Q  Q  I  Q  S  G  S  L  A  V  H  L  W  N  K  Q  S  R  E  L  E  V  E  E  G  S  I  I  Q  H  I  M  S  D  C  C  V  F  C  N  S  Y  S  S  K  L  *  V  Y  T  T  *  N  Q  R  Q  R  V  L  F  F  I  N  C  C  R  I  M  D  H  L  S  S  L  H  R  L  S  *  R  N  *  V  V  Q  K  *  C  R  I  H  V  F  Y  F  I  V  D  V  I  E  Q  I  I  Q  R  *  K  S  R  I  I  A  K  F  P  L  T  E  M  L  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0127N23.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="62356" stop="63699"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1341</number_coding_nucleotides>
                  <number_encoded_amino_acids>447</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KLLQKMKKETFLNFQEKTMDGVIKRRSLYAIGSCFLLFLLAYNSSTVFYVQVPVPGNSSPEISSFLTENVARKSRKLVSLSTSAKRSSSAIYAVKEETPLVKPNTRLIISRKNPNMVGFSYDSEAYQPRRRKKKKSLVKGDRINVFSMRMKEFFGSKASNSSCKFRFFMTWISSIESFGERELFAVESLFKAHPNGCLVIMSTSMDSPRGMQVLNPFLEKGLRATAISPDFMYLFKNTIAQAWIDNLMKGNIDPGEVSLGQNLSNLLRLGLLYKFGGIYLDTDVIVLKSFGKLRNVIGAQTIDVETRNWSRLNNAVMIFDKRHPLLYKFIEEFALTFDGNKWGHNGPYLVSRVVSRVSGRDGYNFTVLPPMAFYPVDWNRIGSLFLGPRNETQSKWLLLKLQQIQSGSLAVHLWNKQSRELEVEEGSIIQHIMSDCCVFCNSYSSKL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="64232" PGL_stop="64674"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="64232" e_stop="64674"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="64232" e_stop="64674" e_length="443"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64232" stop="64674"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U598969" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAGGGTGCTACCTGTATGATAATAGGTCAGTAAGAAAGTTTCTGCTGGAATTATTCTAAGAATTATTCATAAACTACCGTACTAACACTGATAATTCATAATTCTATCTGGTTAGTTCCATGTGAATGTAATTTGTGCAGAAAAGTCATGGAGATGTTGTGATCCAACCACCTTCAGTGAAATCTCCTTACCTTGTGCACAAATGTTTTGTTGACCTGAAACAGGATTAACATGAAGAATACTTGGAAATTTCTTTCATCAGTCATCAGTCCTCATATCTGTTAATTAAAGTAAAATGACAACCAGACATTTTGACTCTGCGCTCCTTCACCGCTCCTCAATCTGTTAATTTTTGTGGCACTGATTACAAGCTTTCATTATCTACATTACTTCTTATAACTGAATTTTTATCCTGTGATGATCTTCATATTGTCCTTTCTAGA</gDNA_template>
            <first_frame> Q  G  A  T  C  M  I  I  G  Q  *  E  S  F  C  W  N  Y  S  K  N  Y  S  *  T  T  V  L  T  L  I  I  H  N  S  I  W  L  V  P  C  E  C  N  L  C  R  K  V  M  E  M  L  *  S  N  H  L  Q  *  N  L  L  T  L  C  T  N  V  L  L  T  *  N  R  I  N  M  K  N  T  W  K  F  L  S  S  V  I  S  P  H  I  C  *  L  K  *  N  D  N  Q  T  F  *  L  C  A  P  S  P  L  L  N  L  L  I  F  V  A  L  I  T  S  F  H  Y  L  H  Y  F  L  *  L  N  F  Y  P  V  M  I  F  I  L  S  F  L   </first_frame>
            <second_frame>  R  V  L  P  V  *  *  *  V  S  K  K  V  S  A  G  I  I  L  R  I  I  H  K  L  P  Y  *  H  *  *  F  I  I  L  S  G  *  F  H  V  N  V  I  C  A  E  K  S  W  R  C  C  D  P  T  T  F  S  E  I  S  L  P  C  A  Q  M  F  C  *  P  E  T  G  L  T  *  R  I  L  G  N  F  F  H  Q  S  S  V  L  I  S  V  N  *  S  K  M  T  T  R  H  F  D  S  A  L  L  H  R  S  S  I  C  *  F  L  W  H  *  L  Q  A  F  I  I  Y  I  T  S  Y  N  *  I  F  I  L  *  *  S  S  Y  C  P  F  *  </second_frame>
            <third_frame>   G  C  Y  L  Y  D  N  R  S  V  R  K  F  L  L  E  L  F  *  E  L  F  I  N  Y  R  T  N  T  D  N  S  *  F  Y  L  V  S  S  M  *  M  *  F  V  Q  K  S  H  G  D  V  V  I  Q  P  P  S  V  K  S  P  Y  L  V  H  K  C  F  V  D  L  K  Q  D  *  H  E  E  Y  L  E  I  S  F  I  S  H  Q  S  S  Y  L  L  I  K  V  K  *  Q  P  D  I  L  T  L  R  S  F  T  A  P  Q  S  V  N  F  C  G  T  D  Y  K  L  S  L  S  T  L  L  L  I  T  E  F  L  S  C  D  D  L  H  I  V  L  S  R </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLm0127N23.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="65933" PGL_stop="65741"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="65933" e_stop="65741"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="65933" e_stop="65741" e_length="193"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65933" stop="65741"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U585902" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTGAACTGTGGAGAATCAATTGCATTATACAATAACATAAAGTGATAAACAAAACAAAAGCTTTATATCTTGATGACATTGAAATTCTATATCTAGAAACTTAGAAGCAATACATAGATTTTGTTCTTCATCCTTGTAATAACAACAGATCAGTGATGGTGAATATATGTATATAGGTTCCACTTGATATTCC</gDNA_template>
            <first_frame> V  N  C  G  E  S  I  A  L  Y  N  N  I  K  *  *  T  K  Q  K  L  Y  I  L  M  T  L  K  F  Y  I  *  K  L  R  S  N  T  *  I  L  F  F  I  L  V  I  T  T  D  Q  *  W  *  I  Y  V  Y  R  F  H  L  I  F  </first_frame>
            <second_frame>  *  T  V  E  N  Q  L  H  Y  T  I  T  *  S  D  K  Q  N  K  S  F  I  S  *  *  H  *  N  S  I  S  R  N  L  E  A  I  H  R  F  C  S  S  S  L  *  *  Q  Q  I  S  D  G  E  Y  M  Y  I  G  S  T  *  Y  S </second_frame>
            <third_frame>   E  L  W  R  I  N  C  I  I  Q  *  H  K  V  I  N  K  T  K  A  L  Y  L  D  D  I  E  I  L  Y  L  E  T  *  K  Q  Y  I  D  F  V  L  H  P  C  N  N  N  R  S  V  M  V  N  I  C  I  *  V  P  L  D  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLm0127N23.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="+" PGL_start="69555" PGL_stop="79845"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="69555" e_stop="69961"/>
            <exon e_start="73299" e_stop="73418"/>
            <exon e_start="73512" e_stop="73637"/>
            <exon e_start="73737" e_stop="73799"/>
            <exon e_start="74577" e_stop="74684"/>
            <exon e_start="75280" e_stop="75357"/>
            <exon e_start="76046" e_stop="76138"/>
            <exon e_start="76250" e_stop="76336"/>
            <exon e_start="76882" e_stop="76983"/>
            <exon e_start="77108" e_stop="77227"/>
            <exon e_start="77340" e_stop="77402"/>
            <exon e_start="78075" e_stop="78208"/>
            <exon e_start="78365" e_stop="78446"/>
            <exon e_start="78535" e_stop="78593"/>
            <exon e_start="78698" e_stop="78743"/>
            <exon e_start="79129" e_stop="79220"/>
            <exon e_start="79309" e_stop="79378"/>
            <exon e_start="79494" e_stop="79845"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.993" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.956" acc_prob="0.971" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.983" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.974" acc_prob="0.974" e_score="0.989"/>
          <exon-intron don_prob="0.997" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.988" e_score="0.980"/>
          <exon-intron don_prob="0.994" acc_prob="0.931" e_score="1.000"/>
          <exon-intron don_prob="0.982" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.990" e_score="0.993"/>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="0.988"/>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.977" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="69555" e_stop="69961" e_length="407"/>
          </exon>
          <intron i_serial="1" don_prob="0.993" acc_prob="0.995">
            <gDNA_intron_boundary i_start="69962" i_stop="73298" i_length="3337"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="73299" e_stop="73418" e_length="120"/>
          </exon>
          <intron i_serial="2" don_prob="0.993" acc_prob="0.987">
            <gDNA_intron_boundary i_start="73419" i_stop="73511" i_length="93"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="73512" e_stop="73637" e_length="126"/>
          </exon>
          <intron i_serial="3" don_prob="0.956" acc_prob="0.971">
            <gDNA_intron_boundary i_start="73638" i_stop="73736" i_length="99"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="73737" e_stop="73799" e_length="63"/>
          </exon>
          <intron i_serial="4" don_prob="0.994" acc_prob="0.997">
            <gDNA_intron_boundary i_start="73800" i_stop="74576" i_length="777"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="74577" e_stop="74684" e_length="108"/>
          </exon>
          <intron i_serial="5" don_prob="0.986" acc_prob="1.000">
            <gDNA_intron_boundary i_start="74685" i_stop="75279" i_length="595"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="75280" e_stop="75357" e_length="78"/>
          </exon>
          <intron i_serial="6" don_prob="0.983" acc_prob="1.000">
            <gDNA_intron_boundary i_start="75358" i_stop="76045" i_length="688"/>
          </intron>
          <exon e_serial="7" e_score="0.989">
            <gDNA_exon_boundary e_start="76046" e_stop="76138" e_length="93"/>
          </exon>
          <intron i_serial="7" don_prob="0.974" acc_prob="0.974">
            <gDNA_intron_boundary i_start="76139" i_stop="76249" i_length="111"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="76250" e_stop="76336" e_length="87"/>
          </exon>
          <intron i_serial="8" don_prob="0.997" acc_prob="0.996">
            <gDNA_intron_boundary i_start="76337" i_stop="76881" i_length="545"/>
          </intron>
          <exon e_serial="9" e_score="0.980">
            <gDNA_exon_boundary e_start="76882" e_stop="76983" e_length="102"/>
          </exon>
          <intron i_serial="9" don_prob="1.000" acc_prob="0.988">
            <gDNA_intron_boundary i_start="76984" i_stop="77107" i_length="124"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="77108" e_stop="77227" e_length="120"/>
          </exon>
          <intron i_serial="10" don_prob="0.994" acc_prob="0.931">
            <gDNA_intron_boundary i_start="77228" i_stop="77339" i_length="112"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="77340" e_stop="77402" e_length="63"/>
          </exon>
          <intron i_serial="11" don_prob="0.982" acc_prob="0.999">
            <gDNA_intron_boundary i_start="77403" i_stop="78074" i_length="672"/>
          </intron>
          <exon e_serial="12" e_score="0.993">
            <gDNA_exon_boundary e_start="78075" e_stop="78208" e_length="134"/>
          </exon>
          <intron i_serial="12" don_prob="0.999" acc_prob="0.990">
            <gDNA_intron_boundary i_start="78209" i_stop="78364" i_length="156"/>
          </intron>
          <exon e_serial="13" e_score="0.988">
            <gDNA_exon_boundary e_start="78365" e_stop="78446" e_length="82"/>
          </exon>
          <intron i_serial="13" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="78447" i_stop="78534" i_length="88"/>
          </intron>
          <exon e_serial="14" e_score="1.000">
            <gDNA_exon_boundary e_start="78535" e_stop="78593" e_length="59"/>
          </exon>
          <intron i_serial="14" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="78594" i_stop="78697" i_length="104"/>
          </intron>
          <exon e_serial="15" e_score="1.000">
            <gDNA_exon_boundary e_start="78698" e_stop="78743" e_length="46"/>
          </exon>
          <intron i_serial="15" don_prob="1.000" acc_prob="0.987">
            <gDNA_intron_boundary i_start="78744" i_stop="79128" i_length="385"/>
          </intron>
          <exon e_serial="16" e_score="1.000">
            <gDNA_exon_boundary e_start="79129" e_stop="79220" e_length="92"/>
          </exon>
          <intron i_serial="16" don_prob="0.977" acc_prob="1.000">
            <gDNA_intron_boundary i_start="79221" i_stop="79308" i_length="88"/>
          </intron>
          <exon e_serial="17" e_score="1.000">
            <gDNA_exon_boundary e_start="79309" e_stop="79378" e_length="70"/>
          </exon>
          <intron i_serial="17" don_prob="0.998" acc_prob="0.000">
            <gDNA_intron_boundary i_start="79379" i_stop="79493" i_length="115"/>
          </intron>
          <exon e_serial="18" e_score="1.000">
            <gDNA_exon_boundary e_start="79494" e_stop="79845" e_length="352"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69555" stop="69961"/>
              <exon start="73299" stop="73418"/>
              <exon start="73512" stop="73637"/>
              <exon start="73737" stop="73799"/>
              <exon start="74577" stop="74684"/>
              <exon start="75280" stop="75357"/>
              <exon start="76046" stop="76138"/>
              <exon start="76250" stop="76336"/>
              <exon start="76882" stop="76983"/>
              <exon start="77108" stop="77227"/>
              <exon start="77340" stop="77402"/>
              <exon start="78075" stop="78208"/>
              <exon start="78365" stop="78446"/>
              <exon start="78535" stop="78593"/>
              <exon start="78698" stop="78743"/>
              <exon start="79129" stop="79220"/>
              <exon start="79309" stop="79378"/>
              <exon start="79494" stop="79845"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U577660" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGCCCAACGATCACTTGCAACGGATCTGATATTTTCTCCTTCACTCTTCTTCATCTTTCGACTCCCTCCATTTTTCTTTCTCTTCACCTTCTCCTATAACTCCACCGGAAAAAAAATATCTCAACTGAATATCTACATTAATCTCAAACGGCCGGAGTAGTATGCCGGTTGAAGTAGCAAACGTAGTGACAGAAGCCATTGGTAATCCAAAAGGCGATTTGAGACCTCAAAACCCTAACGCCGCCTCTAAGAAGTCGAAGGAAAGCGACCGACGCCGTAGGCGGAGGAAGCAGAAGAAGAACAAGGCGGCGTCTAAGGTTGCAAATGGAGAAGACAGTGATAACGCTGCGCAAGACGCGAACGGCGGCGCTGAGGATAGTTCCAAGGAAAATTCCGATCCTCAGAAG : TCTTTGGTTCAAGTTGAAGTAGAATATGTACCAGAGAAGGCCGAATTAGATGGTGAGTTCGATGAGGAATTCAGGAAGGTTTTTGAGAAATTCACTTTCACGGATGCTACTGGTTCTGAG : GAGAATGATAAAAAGGATGAAACTGCTGCTGATGGAGCCTCAAAGAAAAAGGCGGATTCTGATTCTGAGGAGGAAGAAGAGGATGCACAGCAAAAGGAGAAGGGAGTCTCGAACAAAAAGAAAAAA : CTTCAGCGTAGGATGAAAATTGCAGAACTGAAACAAATCTCTATGAAGCCTGATGTTGTTGAG : GTATGGGATGCCACTGCAGCAGACCCTAAGCTCCTGGTATTTCTGAAATCTTACCGGAATACTGTTCCTGTTCCAAGACACTGGTGTCAGAAACGGAAATTTTTGCAG : GGGAAGCGTGGGATTGAGAAACAGCCATTTCAACTTCCTGACTTTATAGCTGCGACAGGAATTGAGAAAATTAGACAA : GCTTATATTGAAAAGGAGGACAGTAAGAAGCTTAAACAAAAGCAGCGGGAAAGGATGCAGCCAAAAATGGGGAAGATGGATATCGATTATCAG : GTTCTACATGACGCCTTTTTTAAGTATCAAACTAAACCAAAGTTGACATCCCTTGGTGATCTGTATTATGAAGGAAAAGAGTTTGAG : GTCAAGTTGAGGGAAATGAAACCTGGAACTTTGTCTCATGAACTGAAAGAGGCCCTTGGTATGCCTGAAGGTGCTCCTCCTCCATGGCTCATCAATATGCAG : AGATATGGTCCTCCACCCTCTTATCCTCAGCTGAAGATTCCTGGACTGAATGCTCCTATTCCACATGGAGCCAAGTTCGGTTATCAGCCGGGAGGTTGGGGTAAACCACCTGTTGATGAA : TATGGGCGCCCTTTATACGGAGATGTCTTTGGTGTATTGCAACAAGATCAGCCTAATTATGAG : GATGAACCTGTTGATAAGACTAAACATTGGGGTGACTTGGAGGAAGAGGAAGAAGAGGAGGAAGAGGAGGAAGAAGAAGAGTTGGAGGAAGAGGAGATGGAGGACGGTATTCAGTCAGTGGACAGTCTTTCAAG : TACTCCTACTGGAGTTGAGACTCCTGATGTTATTGACCTTCGCAAGCAGCAGAGGAAGGAGCCCGAGAAGCCCCTCTATCAG : GTGCTTGAAGAAAAAGAAGAAAAGGTAGCTCCTGGTACTCTTCTTGGAACAAGCCATAC : GTATGTGATCAACACTGGCGCTCAAGACAAGGCTGGTGCCAAAAGG : GTTGATCTGCTCAAAGGTCAGAAGTCGGATAGAGTTGATGTCACATTGGCACCTGAAGAGTTGGAACTTATGGACAATGTTTTACCAGCCAA : ATACGAGGAAGCTAGAGAGGAAGAGAAGCTCCGTAGCCAGCGTGAGGATTTCAGTGACATGGTAGCAGAG : AATGAGAAGAAGAGGAAGCGTAAAATGCAGGAGAAGGATGGCAAGTCGAAGAAGAAGGATTTCAAGTTTTGAGGTTCTGATATATTGTTCCATCTAGTTTAGGGCTGCAGTACATCCAGCTTAGGGTAATAGCATTAGTAGGTCTCCATATGCACTGCGATAAATCTCGTATGCTGTGATGAGAGTGTTTTCCCATGCGTTGAAGCGGGGAGAGTTGGTGTATGATAATCTATCCTATGAAATGTGCTTAGTTTGTACCTCTTGTTTCATTTCTACATACGTTGAGCTGTATGTGAAAATAGAAAATCTCTTGCCCTAATTTAGATGTATGCTCGACTTGGTTATAATTTTA</gDNA_template>
            <first_frame> S  P  T  I  T  C  N  G  S  D  I  F  S  F  T  L  L  H  L  S  T  P  S  I  F  L  S  L  H  L  L  L  *  L  H  R  K  K  N  I  S  T  E  Y  L  H  *  S  Q  T  A  G  V  V  C  R  L  K  *  Q  T  *  *  Q  K  P  L  V  I  Q  K  A  I  *  D  L  K  T  L  T  P  P  L  R  S  R  R  K  A  T  D  A  V  G  G  G  S  R  R  R  T  R  R  R  L  R  L  Q  M  E  K  T  V  I  T  L  R  K  T  R  T  A  A  L  R  I  V  P  R  K  I  P  I  L  R  S :   L  W  F  K  L  K  *  N  M  Y  Q  R  R  P  N  *  M  V  S  S  M  R  N  S  G  R  F  L  R  N  S  L  S  R  M  L  L  V  L  R :   R  M  I  K  R  M  K  L  L  L  M  E  P  Q  R  K  R  R  I  L  I  L  R  R  K  K  R  M  H  S  K  R  R  R  E  S  R  T  K  R  K  N :   F  S  V  G  *  K  L  Q  N  *  N  K  S  L  *  S  L  M  L  L  R :   Y  G  M  P  L  Q  Q  T  L  S  S  W  Y  F  *  N  L  T  G  I  L  F  L  F  Q  D  T  G  V  R  N  G  N  F  C  R :   G  S  V  G  L  R  N  S  H  F  N  F  L  T  L  *  L  R  Q  E  L  R  K  L  D  K :   L  I  L  K  R  R  T  V  R  S  L  N  K  S  S  G  K  G  C  S  Q  K  W  G  R  W  I  S  I  I  R :   F  Y  M  T  P  F  L  S  I  K  L  N  Q  S  *  H  P  L  V  I  C  I  M  K  E  K  S  L  R :   S  S  *  G  K  *  N  L  E  L  C  L  M  N  *  K  R  P  L  V  C  L  K  V  L  L  L  H  G  S  S  I  C  R :   D  M  V  L  H  P  L  I  L  S  *  R  F  L  D  *  M  L  L  F  H  M  E  P  S  S  V  I  S  R  E  V  G  V  N  H  L  L  M  N :   M  G  A  L  Y  T  E  M  S  L  V  Y  C  N  K  I  S  L  I  M  R :   M  N  L  L  I  R  L  N  I  G  V  T  W  R  K  R  K  K  R  R  K  R  R  K  K  K  S  W  R  K  R  R  W  R  T  V  F  S  Q  W  T  V  F  Q   : V  L  L  L  E  L  R  L  L  M  L  L  T  F  A  S  S  R  G  R  S  P  R  S  P  S  I  R :   C  L  K  K  K  K  K  R  *  L  L  V  L  F  L  E  Q  A  I   : R  M  *  S  T  L  A  L  K  T  R  L  V  P  K  G :   L  I  C  S  K  V  R  S  R  I  E  L  M  S  H  W  H  L  K  S  W  N  L  W  T  M  F  Y  Q  P   : N  T  R  K  L  E  R  K  R  S  S  V  A  S  V  R  I  S  V  T  W  *  Q  R :   M  R  R  R  G  S  V  K  C  R  R  R  M  A  S  R  R  R  R  I  S  S  F  E  V  L  I  Y  C  S  I  *  F  R  A  A  V  H  P  A  *  G  N  S  I  S  R  S  P  Y  A  L  R  *  I  S  Y  A  V  M  R  V  F  S  H  A  L  K  R  G  E  L  V  Y  D  N  L  S  Y  E  M  C  L  V  C  T  S  C  F  I  S  T  Y  V  E  L  Y  V  K  I  E  N  L  L  P  *  F  R  C  M  L  D  L  V  I  I  L </first_frame>
            <second_frame>  A  Q  R  S  L  A  T  D  L  I  F  S  P  S  L  F  F  I  F  R  L  P  P  F  F  F  L  F  T  F  S  Y  N  S  T  G  K  K  I  S  Q  L  N  I  Y  I  N  L  K  R  P  E  *  Y  A  G  *  S  S  K  R  S  D  R  S  H  W  *  S  K  R  R  F  E  T  S  K  P  *  R  R  L  *  E  V  E  G  K  R  P  T  P  *  A  E  E  A  E  E  E  Q  G  G  V  *  G  C  K  W  R  R  Q  *  *  R  C  A  R  R  E  R  R  R  *  G  *  F  Q  G  K  F  R  S  S  E   : V  F  G  S  S  *  S  R  I  C  T  R  E  G  R  I  R  W  *  V  R  *  G  I  Q  E  G  F  *  E  I  H  F  H  G  C  Y  W  F  *   : G  E  *  *  K  G  *  N  C  C  *  W  S  L  K  E  K  G  G  F  *  F  *  G  G  R  R  G  C  T  A  K  G  E  G  S  L  E  Q  K  E  K   : T  S  A  *  D  E  N  C  R  T  E  T  N  L  Y  E  A  *  C  C  *   : G  M  G  C  H  C  S  R  P  *  A  P  G  I  S  E  I  L  P  E  Y  C  S  C  S  K  T  L  V  S  E  T  E  I  F  A   : G  E  A  W  D  *  E  T  A  I  S  T  S  *  L  Y  S  C  D  R  N  *  E  N  *  T   : S  L  Y  *  K  G  G  Q  *  E  A  *  T  K  A  A  G  K  D  A  A  K  N  G  E  D  G  Y  R  L  S   : G  S  T  *  R  L  F  *  V  S  N  *  T  K  V  D  I  P  W  *  S  V  L  *  R  K  R  V  *   : G  Q  V  E  G  N  E  T  W  N  F  V  S  *  T  E  R  G  P  W  Y  A  *  R  C  S  S  S  M  A  H  Q  Y  A   : E  I  W  S  S  T  L  L  S  S  A  E  D  S  W  T  E  C  S  Y  S  T  W  S  Q  V  R  L  S  A  G  R  L  G  *  T  T  C  *  *   : I  W  A  P  F  I  R  R  C  L  W  C  I  A  T  R  S  A  *  L  *   : G  *  T  C  *  *  D  *  T  L  G  *  L  G  G  R  G  R  R  G  G  R  G  G  R  R  R  V  G  G  R  G  D  G  G  R  Y  S  V  S  G  Q  S  F  K  :  Y  S  Y  W  S  *  D  S  *  C  Y  *  P  S  Q  A  A  E  E  G  A  R  E  A  P  L  S   : G  A  *  R  K  R  R  K  G  S  S  W  Y  S  S  W  N  K  P  Y  :  V  C  D  Q  H  W  R  S  R  Q  G  W  C  Q  K   : G  *  S  A  Q  R  S  E  V  G  *  S  *  C  H  I  G  T  *  R  V  G  T  Y  G  Q  C  F  T  S  Q  :  I  R  G  S  *  R  G  R  E  A  P  *  P  A  *  G  F  Q  *  H  G  S  R   : E  *  E  E  E  E  A  *  N  A  G  E  G  W  Q  V  E  E  E  G  F  Q  V  L  R  F  *  Y  I  V  P  S  S  L  G  L  Q  Y  I  Q  L  R  V  I  A  L  V  G  L  H  M  H  C  D  K  S  R  M  L  *  *  E  C  F  P  M  R  *  S  G  E  S  W  C  M  I  I  Y  P  M  K  C  A  *  F  V  P  L  V  S  F  L  H  T  L  S  C  M  *  K  *  K  I  S  C  P  N  L  D  V  C  S  T  W  L  *  F   </second_frame>
            <third_frame>   P  N  D  H  L  Q  R  I  *  Y  F  L  L  H  S  S  S  S  F  D  S  L  H  F  S  F  S  S  P  S  P  I  T  P  P  E  K  K  Y  L  N  *  I  S  T  L  I  S  N  G  R  S  S  M  P  V  E  V  A  N  V  V  T  E  A  I  G  N  P  K  G  D  L  R  P  Q  N  P  N  A  A  S  K  K  S  K  E  S  D  R  R  R  R  R  R  K  Q  K  K  N  K  A  A  S  K  V  A  N  G  E  D  S  D  N  A  A  Q  D  A  N  G  G  A  E  D  S  S  K  E  N  S  D  P  Q  K  :  S  L  V  Q  V  E  V  E  Y  V  P  E  K  A  E  L  D  G  E  F  D  E  E  F  R  K  V  F  E  K  F  T  F  T  D  A  T  G  S  E  :  E  N  D  K  K  D  E  T  A  A  D  G  A  S  K  K  K  A  D  S  D  S  E  E  E  E  E  D  A  Q  Q  K  E  K  G  V  S  N  K  K  K  K  :  L  Q  R  R  M  K  I  A  E  L  K  Q  I  S  M  K  P  D  V  V  E  :  V  W  D  A  T  A  A  D  P  K  L  L  V  F  L  K  S  Y  R  N  T  V  P  V  P  R  H  W  C  Q  K  R  K  F  L  Q  :  G  K  R  G  I  E  K  Q  P  F  Q  L  P  D  F  I  A  A  T  G  I  E  K  I  R  Q  :  A  Y  I  E  K  E  D  S  K  K  L  K  Q  K  Q  R  E  R  M  Q  P  K  M  G  K  M  D  I  D  Y  Q  :  V  L  H  D  A  F  F  K  Y  Q  T  K  P  K  L  T  S  L  G  D  L  Y  Y  E  G  K  E  F  E  :  V  K  L  R  E  M  K  P  G  T  L  S  H  E  L  K  E  A  L  G  M  P  E  G  A  P  P  P  W  L  I  N  M  Q  :  R  Y  G  P  P  P  S  Y  P  Q  L  K  I  P  G  L  N  A  P  I  P  H  G  A  K  F  G  Y  Q  P  G  G  W  G  K  P  P  V  D  E  :  Y  G  R  P  L  Y  G  D  V  F  G  V  L  Q  Q  D  Q  P  N  Y  E  :  D  E  P  V  D  K  T  K  H  W  G  D  L  E  E  E  E  E  E  E  E  E  E  E  E  E  E  L  E  E  E  E  M  E  D  G  I  Q  S  V  D  S  L  S  S :   T  P  T  G  V  E  T  P  D  V  I  D  L  R  K  Q  Q  R  K  E  P  E  K  P  L  Y  Q  :  V  L  E  E  K  E  E  K  V  A  P  G  T  L  L  G  T  S  H  T :   Y  V  I  N  T  G  A  Q  D  K  A  G  A  K  R  :  V  D  L  L  K  G  Q  K  S  D  R  V  D  V  T  L  A  P  E  E  L  E  L  M  D  N  V  L  P  A  K :   Y  E  E  A  R  E  E  E  K  L  R  S  Q  R  E  D  F  S  D  M  V  A  E  :  N  E  K  K  R  K  R  K  M  Q  E  K  D  G  K  S  K  K  K  D  F  K  F  *  G  S  D  I  L  F  H  L  V  *  G  C  S  T  S  S  L  G  *  *  H  *  *  V  S  I  C  T  A  I  N  L  V  C  C  D  E  S  V  F  P  C  V  E  A  G  R  V  G  V  *  *  S  I  L  *  N  V  L  S  L  Y  L  L  F  H  F  Y  I  R  *  A  V  C  E  N  R  K  S  L  A  L  I  *  M  Y  A  R  L  G  Y  N  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0127N23.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="69683" stop="69961"/>
                    <exon start="73299" stop="73418"/>
                    <exon start="73512" stop="73637"/>
                    <exon start="73737" stop="73799"/>
                    <exon start="74577" stop="74684"/>
                    <exon start="75280" stop="75357"/>
                    <exon start="76046" stop="76138"/>
                    <exon start="76250" stop="76336"/>
                    <exon start="76882" stop="76983"/>
                    <exon start="77108" stop="77227"/>
                    <exon start="77340" stop="77402"/>
                    <exon start="78075" stop="78208"/>
                    <exon start="78365" stop="78446"/>
                    <exon start="78535" stop="78593"/>
                    <exon start="78698" stop="78743"/>
                    <exon start="79129" stop="79220"/>
                    <exon start="79309" stop="79378"/>
                    <exon start="79494" stop="79565"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1791</number_coding_nucleotides>
                  <number_encoded_amino_acids>597</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ISTLISNGRSSMPVEVANVVTEAIGNPKGDLRPQNPNAASKKSKESDRRRRRRKQKKNKAASKVANGEDSDNAAQDANGGAEDSSKENSDPQKSLVQVEVEYVPEKAELDGEFDEEFRKVFEKFTFTDATGSEENDKKDETAADGASKKKADSDSEEEEEDAQQKEKGVSNKKKKLQRRMKIAELKQISMKPDVVEVWDATAADPKLLVFLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTSLGDLYYEGKEFEVKLREMKPGTLSHELKEALGMPEGAPPPWLINMQRYGPPPSYPQLKIPGLNAPIPHGAKFGYQPGGWGKPPVDEYGRPLYGDVFGVLQQDQPNYEDEPVDKTKHWGDLEEEEEEEEEEEEEELEEEEMEDGIQSVDSLSSTPTGVETPDVIDLRKQQRKEPEKPLYQVLEEKEEKVAPGTLLGTSHTYVINTGAQDKAGAKRVDLLKGQKSDRVDVTLAPEELELMDNVLPAKYEEAREEEKLRSQREDFSDMVAENEKKRKRKMQEKDGKSKKKDFKF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="+" PGL_start="83489" PGL_stop="84258"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="83489" e_stop="84258"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.987"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.987">
            <gDNA_exon_boundary e_start="83489" e_stop="84258" e_length="770"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83489" stop="84258"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U595859" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTTTCTTGTATCAAGATCCAAACGCAAAAATTATACATTAGAAATCAATACGTCGATTGTTTCGTTTCTGTATACTAGAATTATATATTTCATTGCTCAGGTAGCGAAGGTTCATTTGTTTATCGATTTATGGGGTTGAGTACTAAGTTGGTTTCAATTGATGATGATGGTCTAGATAATTGGACCACCACCACCCACAATACTCGACCGGAACCACCGTCGATAAGGCGGCAGCTGCCGTCGAAATCGGAGTCGTTGAAATGTCCAAGGTGTGATTCAATCAACACAAAATTTTGTTATTACAACAATTACAACAAGTCACAGCCTAGACATTATTGTAAAGGTTGTAAGAGGCATTGGACCGAAGGTGGCACCCTACGTAACGTTCCGGTAGGCGGTGGGCGAAAAAATAAGCGTGTAAGACCTACTGATCCCGTTGATCATATAAATGGAAGGAAACATGTCAGATTAGAAGTAAACGATCAGAGGTGTCCACTAATCACAACGACGAGTATGACCAATAGTATTATTACAAGTTCCATATTGCCAAGTGTCACATTAATAAGGGGAAATAGTACTATTACTAGTGCTATAGATGAAGATATCAAAAATCTTACTTCATCCTCATTACCTTATGACATATTTTCAAATATTTCTCAAGATCATGGGAATACACATTTTTCATTAATTCCCAATTCTAGTACTAATACTCAATTATCTTCAAACGTTTATTATAATTATGAACATATGGGGAAGTTTGATAGTACAAT</gDNA_template>
            <first_frame> L  S  C  I  K  I  Q  T  Q  K  L  Y  I  R  N  Q  Y  V  D  C  F  V  S  V  Y  *  N  Y  I  F  H  C  S  G  S  E  G  S  F  V  Y  R  F  M  G  L  S  T  K  L  V  S  I  D  D  D  G  L  D  N  W  T  T  T  T  H  N  T  R  P  E  P  P  S  I  R  R  Q  L  P  S  K  S  E  S  L  K  C  P  R  C  D  S  I  N  T  K  F  C  Y  Y  N  N  Y  N  K  S  Q  P  R  H  Y  C  K  G  C  K  R  H  W  T  E  G  G  T  L  R  N  V  P  V  G  G  G  R  K  N  K  R  V  R  P  T  D  P  V  D  H  I  N  G  R  K  H  V  R  L  E  V  N  D  Q  R  C  P  L  I  T  T  T  S  M  T  N  S  I  I  T  S  S  I  L  P  S  V  T  L  I  R  G  N  S  T  I  T  S  A  I  D  E  D  I  K  N  L  T  S  S  S  L  P  Y  D  I  F  S  N  I  S  Q  D  H  G  N  T  H  F  S  L  I  P  N  S  S  T  N  T  Q  L  S  S  N  V  Y  Y  N  Y  E  H  M  G  K  F  D  S  T   </first_frame>
            <second_frame>  F  L  V  S  R  S  K  R  K  N  Y  T  L  E  I  N  T  S  I  V  S  F  L  Y  T  R  I  I  Y  F  I  A  Q  V  A  K  V  H  L  F  I  D  L  W  G  *  V  L  S  W  F  Q  L  M  M  M  V  *  I  I  G  P  P  P  P  T  I  L  D  R  N  H  R  R  *  G  G  S  C  R  R  N  R  S  R  *  N  V  Q  G  V  I  Q  S  T  Q  N  F  V  I  T  T  I  T  T  S  H  S  L  D  I  I  V  K  V  V  R  G  I  G  P  K  V  A  P  Y  V  T  F  R  *  A  V  G  E  K  I  S  V  *  D  L  L  I  P  L  I  I  *  M  E  G  N  M  S  D  *  K  *  T  I  R  G  V  H  *  S  Q  R  R  V  *  P  I  V  L  L  Q  V  P  Y  C  Q  V  S  H  *  *  G  E  I  V  L  L  L  V  L  *  M  K  I  S  K  I  L  L  H  P  H  Y  L  M  T  Y  F  Q  I  F  L  K  I  M  G  I  H  I  F  H  *  F  P  I  L  V  L  I  L  N  Y  L  Q  T  F  I  I  I  M  N  I  W  G  S  L  I  V  Q  </second_frame>
            <third_frame>   F  L  Y  Q  D  P  N  A  K  I  I  H  *  K  S  I  R  R  L  F  R  F  C  I  L  E  L  Y  I  S  L  L  R  *  R  R  F  I  C  L  S  I  Y  G  V  E  Y  *  V  G  F  N  *  *  *  W  S  R  *  L  D  H  H  H  P  Q  Y  S  T  G  T  T  V  D  K  A  A  A  A  V  E  I  G  V  V  E  M  S  K  V  *  F  N  Q  H  K  I  L  L  L  Q  Q  L  Q  Q  V  T  A  *  T  L  L  *  R  L  *  E  A  L  D  R  R  W  H  P  T  *  R  S  G  R  R  W  A  K  K  *  A  C  K  T  Y  *  S  R  *  S  Y  K  W  K  E  T  C  Q  I  R  S  K  R  S  E  V  S  T  N  H  N  D  E  Y  D  Q  *  Y  Y  Y  K  F  H  I  A  K  C  H  I  N  K  G  K  *  Y  Y  Y  *  C  Y  R  *  R  Y  Q  K  S  Y  F  I  L  I  T  L  *  H  I  F  K  Y  F  S  R  S  W  E  Y  T  F  F  I  N  S  Q  F  *  Y  *  Y  S  I  I  F  K  R  L  L  *  L  *  T  Y  G  E  V  *  *  Y  N </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0127N23.1" strand="+"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="83567" stop="84256"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>690</number_coding_nucleotides>
                  <number_encoded_amino_acids>230</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NYIFHCSGSEGSFVYRFMGLSTKLVSIDDDGLDNWTTTTHNTRPEPPSIRRQLPSKSESLKCPRCDSINTKFCYYNNYNKSQPRHYCKGCKRHWTEGGTLRNVPVGGGRKNKRVRPTDPVDHINGRKHVRLEVNDQRCPLITTTSMTNSIITSSILPSVTLIRGNSTITSAIDEDIKNLTSSSLPYDIFSNISQDHGNTHFSLIPNSSTNTQLSSNVYYNYEHMGKFDST</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="-" PGL_start="89403" PGL_stop="85604"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="89403" e_stop="89185"/>
            <exon e_start="88873" e_stop="88754"/>
            <exon e_start="86715" e_stop="86516"/>
            <exon e_start="86379" e_stop="85604"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.991" acc_prob="0.997" e_score="0.995"/>
          <exon-intron don_prob="0.997" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.970" e_score="1.000"/>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="89403" e_stop="89185" e_length="219"/>
          </exon>
          <intron i_serial="1" don_prob="0.991" acc_prob="0.997">
            <gDNA_intron_boundary i_start="89184" i_stop="88874" i_length="311"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="88873" e_stop="88754" e_length="120"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.999">
            <gDNA_intron_boundary i_start="88753" i_stop="86716" i_length="2038"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="86715" e_stop="86516" e_length="200"/>
          </exon>
          <intron i_serial="3" don_prob="0.997" acc_prob="0.970">
            <gDNA_intron_boundary i_start="86515" i_stop="86380" i_length="136"/>
          </intron>
          <exon e_serial="4" e_score="0.999">
            <gDNA_exon_boundary e_start="86379" e_stop="85604" e_length="776"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89403" stop="89185"/>
              <exon start="88873" stop="88754"/>
              <exon start="86715" stop="86516"/>
              <exon start="86379" stop="85604"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U569941" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAAAGGGATAATGTAGGTTCAAGTACAAACGCAAAAATTAAATTGCATATATTATTTATGCAGTGATACTGGCTTAAAATCTAACTCTCAGAATGCTAGTATAATTTATACTATATTATATTTTTTTTTATACACAACCAATTAAATGTTGCATTATCTTCTACAAGTTTTATACTGAGATTAGTTGCACTAATAACACTAGGCCACCTCTTAAAATAG : ATAGCAAAAATATAAAGTTTGTATAGCAAGATGGCTTCAACACTGTTACTAGTTTTGGTTTTTGTGCTTGATTTGATTGCTTTTGGACTTGCTGTTGCTGCTGAGCAGAGGAGGGCTACT : GCAACGATCAACAGAGATGCAGAGTATAACTACTGTGTGTATGAGTCAGATGTTGCAACTGGCTTGGGCGTGGGTTCATTCTTCTTTCTTTTATCTAGTCAGCTCCTCATAATGTTTGCAAGCCGATGTTTATGCTGTGGGAGGGCACTGCGACCAGGAAAGCCCCGATCATGGGCTATTGTCTTATTCATCACCTGCTG : GGTCACCTTCTTTATTGCTGAAGTGTGCTTACTGGCGGCTTCCGTTAGGAATGCCTACCACACAAAGTATAGGACTTACTTGGCACAACATCCTCCATCCTGCGAGGTTTTGAGGAAGGGAGTCTTTGGTGCTGGCGCTGCTTTTATTGTTTTCACAGGCATCGTCTCTGAACTTTTCTACGTCAGCTATTCCAAGGCCGATGAAGGATCCATTCCTCCAAGAATGGATGGTGGCATAAGGATGAATGCGTTCATGTGAATCCATTGAGCAGAAGGAGGTTTTGGTTGTATACTCTCTAAGCTTTTGCACTTACTTAGACTGTGATATTGGTAACGTGGTATACTTAACCCTGTTGGCTTGCTGATTTGACTTCAACAGAATTAGAGATTCTGATCATTTGTCGCGACTTTATGTGCATCCTTCATCATTGTCCAAAATTTCTGAGTAGGGATATAGACATAGATAGATATAACTGCTACTTGTGATTTCTGTTATACAATGTTTTGAAGAAAGTTTTCTGGGGCCTTGAGATGATTCTAATGTTCCTATAATCCTATTGCCATTTCACAATCTGTTTTAGTAGAATATTCATTTTTCTTGACACGGTTTGAAACTCAGTGAATAATGGTTCTGCCCGCCCTACTATCCTTCCCCCCAAATGGGTTTGAATACCTGTTATGTGATTGTGATTGTGATTGTAATAGTGATAACAGATAAGTGTCATATAAATATGTTATCATTTCATTTATAATTAATTACGATATATTTTCACCTC</gDNA_template>
            <first_frame> E  R  D  N  V  G  S  S  T  N  A  K  I  K  L  H  I  L  F  M  Q  *  Y  W  L  K  I  *  L  S  E  C  *  Y  N  L  Y  Y  I  I  F  F  F  I  H  N  Q  L  N  V  A  L  S  S  T  S  F  I  L  R  L  V  A  L  I  T  L  G  H  L  L  K  *  :  I  A  K  I  *  S  L  Y  S  K  M  A  S  T  L  L  L  V  L  V  F  V  L  D  L  I  A  F  G  L  A  V  A  A  E  Q  R  R  A  T  :  A  T  I  N  R  D  A  E  Y  N  Y  C  V  Y  E  S  D  V  A  T  G  L  G  V  G  S  F  F  F  L  L  S  S  Q  L  L  I  M  F  A  S  R  C  L  C  C  G  R  A  L  R  P  G  K  P  R  S  W  A  I  V  L  F  I  T  C  W :   V  T  F  F  I  A  E  V  C  L  L  A  A  S  V  R  N  A  Y  H  T  K  Y  R  T  Y  L  A  Q  H  P  P  S  C  E  V  L  R  K  G  V  F  G  A  G  A  A  F  I  V  F  T  G  I  V  S  E  L  F  Y  V  S  Y  S  K  A  D  E  G  S  I  P  P  R  M  D  G  G  I  R  M  N  A  F  M  *  I  H  *  A  E  G  G  F  G  C  I  L  S  K  L  L  H  L  L  R  L  *  Y  W  *  R  G  I  L  N  P  V  G  L  L  I  *  L  Q  Q  N  *  R  F  *  S  F  V  A  T  L  C  A  S  F  I  I  V  Q  N  F  *  V  G  I  *  T  *  I  D  I  T  A  T  C  D  F  C  Y  T  M  F  *  R  K  F  S  G  A  L  R  *  F  *  C  S  Y  N  P  I  A  I  S  Q  S  V  L  V  E  Y  S  F  F  L  T  R  F  E  T  Q  *  I  M  V  L  P  A  L  L  S  F  P  P  N  G  F  E  Y  L  L  C  D  C  D  C  D  C  N  S  D  N  R  *  V  S  Y  K  Y  V  I  I  S  F  I  I  N  Y  D  I  F  S  P  </first_frame>
            <second_frame>  K  G  I  M  *  V  Q  V  Q  T  Q  K  L  N  C  I  Y  Y  L  C  S  D  T  G  L  K  S  N  S  Q  N  A  S  I  I  Y  T  I  L  Y  F  F  L  Y  T  T  N  *  M  L  H  Y  L  L  Q  V  L  Y  *  D  *  L  H  *  *  H  *  A  T  S  *  N  R :   *  Q  K  Y  K  V  C  I  A  R  W  L  Q  H  C  Y  *  F  W  F  L  C  L  I  *  L  L  L  D  L  L  L  L  L  S  R  G  G  L  L :   Q  R  S  T  E  M  Q  S  I  T  T  V  C  M  S  Q  M  L  Q  L  A  W  A  W  V  H  S  S  F  F  Y  L  V  S  S  S  *  C  L  Q  A  D  V  Y  A  V  G  G  H  C  D  Q  E  S  P  D  H  G  L  L  S  Y  S  S  P  A   : G  S  P  S  L  L  L  K  C  A  Y  W  R  L  P  L  G  M  P  T  T  Q  S  I  G  L  T  W  H  N  I  L  H  P  A  R  F  *  G  R  E  S  L  V  L  A  L  L  L  L  F  S  Q  A  S  S  L  N  F  S  T  S  A  I  P  R  P  M  K  D  P  F  L  Q  E  W  M  V  A  *  G  *  M  R  S  C  E  S  I  E  Q  K  E  V  L  V  V  Y  S  L  S  F  C  T  Y  L  D  C  D  I  G  N  V  V  Y  L  T  L  L  A  C  *  F  D  F  N  R  I  R  D  S  D  H  L  S  R  L  Y  V  H  P  S  S  L  S  K  I  S  E  *  G  Y  R  H  R  *  I  *  L  L  L  V  I  S  V  I  Q  C  F  E  E  S  F  L  G  P  *  D  D  S  N  V  P  I  I  L  L  P  F  H  N  L  F  *  *  N  I  H  F  S  *  H  G  L  K  L  S  E  *  W  F  C  P  P  Y  Y  P  S  P  Q  M  G  L  N  T  C  Y  V  I  V  I  V  I  V  I  V  I  T  D  K  C  H  I  N  M  L  S  F  H  L  *  L  I  T  I  Y  F  H  L </second_frame>
            <third_frame>   K  G  *  C  R  F  K  Y  K  R  K  N  *  I  A  Y  I  I  Y  A  V  I  L  A  *  N  L  T  L  R  M  L  V  *  F  I  L  Y  Y  I  F  F  Y  T  Q  P  I  K  C  C  I  I  F  Y  K  F  Y  T  E  I  S  C  T  N  N  T  R  P  P  L  K  I   : D  S  K  N  I  K  F  V  *  Q  D  G  F  N  T  V  T  S  F  G  F  C  A  *  F  D  C  F  W  T  C  C  C  C  *  A  E  E  G  Y   : C  N  D  Q  Q  R  C  R  V  *  L  L  C  V  *  V  R  C  C  N  W  L  G  R  G  F  I  L  L  S  F  I  *  S  A  P  H  N  V  C  K  P  M  F  M  L  W  E  G  T  A  T  R  K  A  P  I  M  G  Y  C  L  I  H  H  L  L  :  G  H  L  L  Y  C  *  S  V  L  T  G  G  F  R  *  E  C  L  P  H  K  V  *  D  L  L  G  T  T  S  S  I  L  R  G  F  E  E  G  S  L  W  C  W  R  C  F  Y  C  F  H  R  H  R  L  *  T  F  L  R  Q  L  F  Q  G  R  *  R  I  H  S  S  K  N  G  W  W  H  K  D  E  C  V  H  V  N  P  L  S  R  R  R  F  W  L  Y  T  L  *  A  F  A  L  T  *  T  V  I  L  V  T  W  Y  T  *  P  C  W  L  A  D  L  T  S  T  E  L  E  I  L  I  I  C  R  D  F  M  C  I  L  H  H  C  P  K  F  L  S  R  D  I  D  I  D  R  Y  N  C  Y  L  *  F  L  L  Y  N  V  L  K  K  V  F  W  G  L  E  M  I  L  M  F  L  *  S  Y  C  H  F  T  I  C  F  S  R  I  F  I  F  L  D  T  V  *  N  S  V  N  N  G  S  A  R  P  T  I  L  P  P  K  W  V  *  I  P  V  M  *  L  *  L  *  L  *  *  *  *  Q  I  S  V  I  *  I  C  Y  H  F  I  Y  N  *  L  R  Y  I  F  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0127N23.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="88858" stop="88754"/>
                    <exon start="86715" stop="86516"/>
                    <exon start="86379" stop="86121"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>561</number_coding_nucleotides>
                  <number_encoded_amino_acids>187</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SLYSKMASTLLLVLVFVLDLIAFGLAVAAEQRRATATINRDAEYNYCVYESDVATGLGVGSFFFLLSSQLLIMFASRCLCCGRALRPGKPRSWAIVLFITCWVTFFIAEVCLLAASVRNAYHTKYRTYLAQHPPSCEVLRKGVFGAGAAFIVFTGIVSELFYVSYSKADEGSIPPRMDGGIRMNAFM*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="+" PGL_start="87257" PGL_stop="88039"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="87257" e_stop="88039"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="87257" e_stop="88039" e_length="783"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="87257" stop="88039"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U567391" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGACTCACATGCTCGGACAACTTCTACTCCACTTGCATTTGATCAAGGACATCAACATTGGTTAACTCTCTTAGAGAGTAGACATACATATTGGGGTTGATTTAATACAGACCTAACAAAAGATTATAATCACCTCACCTTCCAACCACACGCACGGAGATTCAAGGGAAGAAGAGAGAACACCAAGCAAGATGTAATAATACCATGGATGAAGTTGATGCATAGTATCTTGAAAGGGAAGGTCCACATGTACTTGAGATCTCTGGCCACACTTTCTAATCCACTCACTTGTTTATATGGCGATGTGACTGAACAAGTTACTTTTCTAATTTGATTATCCAAATCTTAAAAGAGCATCAAGTTACTTGCGGAATATCAAAGCATCGAAACAACCTTTTTAAATCAACTGAATAAAGGATATAACTAGCACTCCTTCCAAGTTTATCCACACCCAAGAAGTTGGATAGGGAATTATCTCAGGTCAGACTTGCAAATCTATTCACGTGCTTATATAACAATGAGAATGGGAAAATAATGCTTCTAACTTAATATTTGATTGACATAACTAAAAGCATCTAAGTCACCAAGTCCTTTATTCAGGTAACAAAATTGACCTGATATCACGACAAGCTTCAGCATATGTAAACTAATCTGTAGATGTGACACTATGGCGATAGATGGTAATAAAAGCGAACAAGGTAGATCTATGAACAGATGGAGGAATTTGTAGGTATCAATGTGAACTTAGGCCTTAGCAAACATAATACATAATGGAAGCACGGA</gDNA_template>
            <first_frame> R  L  T  C  S  D  N  F  Y  S  T  C  I  *  S  R  T  S  T  L  V  N  S  L  R  E  *  T  Y  I  L  G  L  I  *  Y  R  P  N  K  R  L  *  S  P  H  L  P  T  T  R  T  E  I  Q  G  K  K  R  E  H  Q  A  R  C  N  N  T  M  D  E  V  D  A  *  Y  L  E  R  E  G  P  H  V  L  E  I  S  G  H  T  F  *  S  T  H  L  F  I  W  R  C  D  *  T  S  Y  F  S  N  L  I  I  Q  I  L  K  E  H  Q  V  T  C  G  I  S  K  H  R  N  N  L  F  K  S  T  E  *  R  I  *  L  A  L  L  P  S  L  S  T  P  K  K  L  D  R  E  L  S  Q  V  R  L  A  N  L  F  T  C  L  Y  N  N  E  N  G  K  I  M  L  L  T  *  Y  L  I  D  I  T  K  S  I  *  V  T  K  S  F  I  Q  V  T  K  L  T  *  Y  H  D  K  L  Q  H  M  *  T  N  L  *  M  *  H  Y  G  D  R  W  *  *  K  R  T  R  *  I  Y  E  Q  M  E  E  F  V  G  I  N  V  N  L  G  L  S  K  H  N  T  *  W  K  H  G </first_frame>
            <second_frame>  D  S  H  A  R  T  T  S  T  P  L  A  F  D  Q  G  H  Q  H  W  L  T  L  L  E  S  R  H  T  Y  W  G  *  F  N  T  D  L  T  K  D  Y  N  H  L  T  F  Q  P  H  A  R  R  F  K  G  R  R  E  N  T  K  Q  D  V  I  I  P  W  M  K  L  M  H  S  I  L  K  G  K  V  H  M  Y  L  R  S  L  A  T  L  S  N  P  L  T  C  L  Y  G  D  V  T  E  Q  V  T  F  L  I  *  L  S  K  S  *  K  S  I  K  L  L  A  E  Y  Q  S  I  E  T  T  F  L  N  Q  L  N  K  G  Y  N  *  H  S  F  Q  V  Y  P  H  P  R  S  W  I  G  N  Y  L  R  S  D  L  Q  I  Y  S  R  A  Y  I  T  M  R  M  G  K  *  C  F  *  L  N  I  *  L  T  *  L  K  A  S  K  S  P  S  P  L  F  R  *  Q  N  *  P  D  I  T  T  S  F  S  I  C  K  L  I  C  R  C  D  T  M  A  I  D  G  N  K  S  E  Q  G  R  S  M  N  R  W  R  N  L  *  V  S  M  *  T  *  A  L  A  N  I  I  H  N  G  S  T   </second_frame>
            <third_frame>   T  H  M  L  G  Q  L  L  L  H  L  H  L  I  K  D  I  N  I  G  *  L  S  *  R  V  D  I  H  I  G  V  D  L  I  Q  T  *  Q  K  I  I  I  T  S  P  S  N  H  T  H  G  D  S  R  E  E  E  R  T  P  S  K  M  *  *  Y  H  G  *  S  *  C  I  V  S  *  K  G  R  S  T  C  T  *  D  L  W  P  H  F  L  I  H  S  L  V  Y  M  A  M  *  L  N  K  L  L  F  *  F  D  Y  P  N  L  K  R  A  S  S  Y  L  R  N  I  K  A  S  K  Q  P  F  *  I  N  *  I  K  D  I  T  S  T  P  S  K  F  I  H  T  Q  E  V  G  *  G  I  I  S  G  Q  T  C  K  S  I  H  V  L  I  *  Q  *  E  W  E  N  N  A  S  N  L  I  F  D  *  H  N  *  K  H  L  S  H  Q  V  L  Y  S  G  N  K  I  D  L  I  S  R  Q  A  S  A  Y  V  N  *  S  V  D  V  T  L  W  R  *  M  V  I  K  A  N  K  V  D  L  *  T  D  G  G  I  C  R  Y  Q  C  E  L  R  P  *  Q  T  *  Y  I  M  E  A  R  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0127N23.1" strand="+"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="87357" stop="87590"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>231</number_coding_nucleotides>
                  <number_encoded_amino_acids>77</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FNTDLTKDYNHLTFQPHARRFKGRRENTKQDVIIPWMKLMHSILKGKVHMYLRSLATLSNPLTCLYGDVTEQVTFLI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="-" PGL_start="91863" PGL_stop="89757"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="91863" e_stop="91760"/>
            <exon e_start="91655" e_stop="91499"/>
            <exon e_start="91414" e_stop="91301"/>
            <exon e_start="91175" e_stop="91080"/>
            <exon e_start="90987" e_stop="90916"/>
            <exon e_start="90833" e_stop="90551"/>
            <exon e_start="90433" e_stop="89757"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.721" acc_prob="0.452" e_score="0.981"/>
          <exon-intron don_prob="0.998" acc_prob="0.925" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.954" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.933" acc_prob="0.977" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.981">
            <gDNA_exon_boundary e_start="91863" e_stop="91760" e_length="104"/>
          </exon>
          <intron i_serial="1" don_prob="0.721" acc_prob="0.452">
            <gDNA_intron_boundary i_start="91759" i_stop="91656" i_length="104"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="91655" e_stop="91499" e_length="157"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.925">
            <gDNA_intron_boundary i_start="91498" i_stop="91415" i_length="84"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="91414" e_stop="91301" e_length="114"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.998">
            <gDNA_intron_boundary i_start="91300" i_stop="91176" i_length="125"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="91175" e_stop="91080" e_length="96"/>
          </exon>
          <intron i_serial="4" don_prob="0.996" acc_prob="0.990">
            <gDNA_intron_boundary i_start="91079" i_stop="90988" i_length="92"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="90987" e_stop="90916" e_length="72"/>
          </exon>
          <intron i_serial="5" don_prob="0.954" acc_prob="0.994">
            <gDNA_intron_boundary i_start="90915" i_stop="90834" i_length="82"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="90833" e_stop="90551" e_length="283"/>
          </exon>
          <intron i_serial="6" don_prob="0.933" acc_prob="0.977">
            <gDNA_intron_boundary i_start="90550" i_stop="90434" i_length="117"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="90433" e_stop="89757" e_length="677"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91863" stop="91760"/>
              <exon start="91655" stop="91499"/>
              <exon start="91414" stop="91301"/>
              <exon start="91175" stop="91080"/>
              <exon start="90987" stop="90916"/>
              <exon start="90833" stop="90551"/>
              <exon start="90433" stop="89757"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U586091" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTATAGGTTCTTCAAAGCACCATATATGATGTTGACCTTGATCGCATCCTTCAGAGTATTCACATTTACCTGCAAGAATTAGGAATGGAAGAGATCAGGAGGAG : AGCGGGAGCCGATGATAAACCTTTAAGAATGGTGAAAACTGTGCTGCATGAACTTGTCAAGCTTCGTGGTACTGCCATAAAAGGTCATCTGTCCATGGTGCCAATCGACATGCAACCACCTCCAATTATTCTTGCCTACATTGATCTTAACCTTCAG : ACCTTGGCCGCTGCAAGGATGTTGACTCCGTCTGTACCTGGCCAAACTCACTGGGGTGATTCTGCAGCAAATAATCCAGCACCAGCAACACATAATGCAGATGCTCAGTTGAAG : CAGGAACTTGCTGCCATATTTAAGAAGATTGGTGACAAGCAAACCTGCACAATTGGTCTTTATGAGTTATACCGGATCACACAATTGTATCCCAAG : GTTGATATATTTGCTCAGCTGCAAAATGCTAGTGAGGCATTCCGAACATATATTAGAGATGGTCTAGCCCAG : ATGGAAAAGAATGCTGCGGCTGGAAGGACTCCTTCTAGTGTACCCATGCCAACTCCTCCTCCGTCTTCACTAAACCTGTCTTCTCCCAAATTTGGTCCTTTATCTCCTGTAAATACCAACCCATTGAATGATGCAAAATCTGTAAACAATAAAATTGAACCATCACACTTTAGTTTGCCACCGTCGTATGGCGAAGATGATAGAGGTGGTAATGCTCTCCCCTCAAGAGGACTATCATCTGAACATTTGGAGTTGCAGAGAAATGATAGATTGCCTTCTGGAG : TTACTAGTGGAACACTAGAAGCGATCCGCGAAAGAATGAAAAGTATTTCATTAGCTACTACCGTGGGGAATGCGGACCCAAGTAATAGACCACTGATGTCCATGAATGGTAACATCAGTCACGTGGTGTCAAATCACGGTCCTGGCACTGAACATTCTAGTGTTGAAAATACCATTCAGAGTGGGGTTCTTCCCATGGATGAGAAGGCACTTTCAGGGCTCCAGGCACGAATGGAGAGGCTGAAGAGTGGATCTATGGAATTCTAGGTATTTTTTGGAGGCATTTCCCAGTGAACTTGCATTATAAGATGCTTTGTGTTTGCCGAGAAACACCTTGAACATTTATATTGCAGTCGTCAGCTCATGTCTGATTACAAGTGGAAAGAAAGGAAAGTTCGTCAAGTGTTGCCTGCCATCTCAATTTTATGGGACAGAATCTTTGTGTTCTTGAGATCTCGTAGATAATGTACCATAATGGTTTTTTTCCGGCAGGGTTAGCTGTATATTTTTGTAGAGATATCTACTGATTTGATTTGGTCTAATTTAATTGAGAGGCTCTCGTGTGTTTCGAAATCGTATGTCATGCCTCAATTGATAGCTAGATTCCGGCTAGATAGTTGAAACTGTTGTAAGCTGTATGATAGCTCTTCAATGTTGAAATCTTCCTATTTTCACGTT</gDNA_template>
            <first_frame> L  *  V  L  Q  S  T  I  Y  D  V  D  L  D  R  I  L  Q  S  I  H  I  Y  L  Q  E  L  G  M  E  E  I  R  R  R :   A  G  A  D  D  K  P  L  R  M  V  K  T  V  L  H  E  L  V  K  L  R  G  T  A  I  K  G  H  L  S  M  V  P  I  D  M  Q  P  P  P  I  I  L  A  Y  I  D  L  N  L  Q  :  T  L  A  A  A  R  M  L  T  P  S  V  P  G  Q  T  H  W  G  D  S  A  A  N  N  P  A  P  A  T  H  N  A  D  A  Q  L  K  :  Q  E  L  A  A  I  F  K  K  I  G  D  K  Q  T  C  T  I  G  L  Y  E  L  Y  R  I  T  Q  L  Y  P  K  :  V  D  I  F  A  Q  L  Q  N  A  S  E  A  F  R  T  Y  I  R  D  G  L  A  Q  :  M  E  K  N  A  A  A  G  R  T  P  S  S  V  P  M  P  T  P  P  P  S  S  L  N  L  S  S  P  K  F  G  P  L  S  P  V  N  T  N  P  L  N  D  A  K  S  V  N  N  K  I  E  P  S  H  F  S  L  P  P  S  Y  G  E  D  D  R  G  G  N  A  L  P  S  R  G  L  S  S  E  H  L  E  L  Q  R  N  D  R  L  P  S  G   : V  T  S  G  T  L  E  A  I  R  E  R  M  K  S  I  S  L  A  T  T  V  G  N  A  D  P  S  N  R  P  L  M  S  M  N  G  N  I  S  H  V  V  S  N  H  G  P  G  T  E  H  S  S  V  E  N  T  I  Q  S  G  V  L  P  M  D  E  K  A  L  S  G  L  Q  A  R  M  E  R  L  K  S  G  S  M  E  F  *  V  F  F  G  G  I  S  Q  *  T  C  I  I  R  C  F  V  F  A  E  K  H  L  E  H  L  Y  C  S  R  Q  L  M  S  D  Y  K  W  K  E  R  K  V  R  Q  V  L  P  A  I  S  I  L  W  D  R  I  F  V  F  L  R  S  R  R  *  C  T  I  M  V  F  F  R  Q  G  *  L  Y  I  F  V  E  I  S  T  D  L  I  W  S  N  L  I  E  R  L  S  C  V  S  K  S  Y  V  M  P  Q  L  I  A  R  F  R  L  D  S  *  N  C  C  K  L  Y  D  S  S  S  M  L  K  S  S  Y  F  H  V </first_frame>
            <second_frame>  Y  R  F  F  K  A  P  Y  M  M  L  T  L  I  A  S  F  R  V  F  T  F  T  C  K  N  *  E  W  K  R  S  G  G   : E  R  E  P  M  I  N  L  *  E  W  *  K  L  C  C  M  N  L  S  S  F  V  V  L  P  *  K  V  I  C  P  W  C  Q  S  T  C  N  H  L  Q  L  F  L  P  T  L  I  L  T  F  R :   P  W  P  L  Q  G  C  *  L  R  L  Y  L  A  K  L  T  G  V  I  L  Q  Q  I  I  Q  H  Q  Q  H  I  M  Q  M  L  S  *  S :   R  N  L  L  P  Y  L  R  R  L  V  T  S  K  P  A  Q  L  V  F  M  S  Y  T  G  S  H  N  C  I  P  R :   L  I  Y  L  L  S  C  K  M  L  V  R  H  S  E  H  I  L  E  M  V  *  P  R :   W  K  R  M  L  R  L  E  G  L  L  L  V  Y  P  C  Q  L  L  L  R  L  H  *  T  C  L  L  P  N  L  V  L  Y  L  L  *  I  P  T  H  *  M  M  Q  N  L  *  T  I  K  L  N  H  H  T  L  V  C  H  R  R  M  A  K  M  I  E  V  V  M  L  S  P  Q  E  D  Y  H  L  N  I  W  S  C  R  E  M  I  D  C  L  L  E  :  L  L  V  E  H  *  K  R  S  A  K  E  *  K  V  F  H  *  L  L  P  W  G  M  R  T  Q  V  I  D  H  *  C  P  *  M  V  T  S  V  T  W  C  Q  I  T  V  L  A  L  N  I  L  V  L  K  I  P  F  R  V  G  F  F  P  W  M  R  R  H  F  Q  G  S  R  H  E  W  R  G  *  R  V  D  L  W  N  S  R  Y  F  L  E  A  F  P  S  E  L  A  L  *  D  A  L  C  L  P  R  N  T  L  N  I  Y  I  A  V  V  S  S  C  L  I  T  S  G  K  K  G  K  F  V  K  C  C  L  P  S  Q  F  Y  G  T  E  S  L  C  S  *  D  L  V  D  N  V  P  *  W  F  F  S  G  R  V  S  C  I  F  L  *  R  Y  L  L  I  *  F  G  L  I  *  L  R  G  S  R  V  F  R  N  R  M  S  C  L  N  *  *  L  D  S  G  *  I  V  E  T  V  V  S  C  M  I  A  L  Q  C  *  N  L  P  I  F  T   </second_frame>
            <third_frame>   I  G  S  S  K  H  H  I  *  C  *  P  *  S  H  P  S  E  Y  S  H  L  P  A  R  I  R  N  G  R  D  Q  E  E  :  S  G  S  R  *  *  T  F  K  N  G  E  N  C  A  A  *  T  C  Q  A  S  W  Y  C  H  K  R  S  S  V  H  G  A  N  R  H  A  T  T  S  N  Y  S  C  L  H  *  S  *  P  S   : D  L  G  R  C  K  D  V  D  S  V  C  T  W  P  N  S  L  G  *  F  C  S  K  *  S  S  T  S  N  T  *  C  R  C  S  V  E   : A  G  T  C  C  H  I  *  E  D  W  *  Q  A  N  L  H  N  W  S  L  *  V  I  P  D  H  T  I  V  S  Q   : G  *  Y  I  C  S  A  A  K  C  *  *  G  I  P  N  I  Y  *  R  W  S  S  P   : D  G  K  E  C  C  G  W  K  D  S  F  *  C  T  H  A  N  S  S  S  V  F  T  K  P  V  F  S  Q  I  W  S  F  I  S  C  K  Y  Q  P  I  E  *  C  K  I  C  K  Q  *  N  *  T  I  T  L  *  F  A  T  V  V  W  R  R  *  *  R  W  *  C  S  P  L  K  R  T  I  I  *  T  F  G  V  A  E  K  *  *  I  A  F  W  S :   Y  *  W  N  T  R  S  D  P  R  K  N  E  K  Y  F  I  S  Y  Y  R  G  E  C  G  P  K  *  *  T  T  D  V  H  E  W  *  H  Q  S  R  G  V  K  S  R  S  W  H  *  T  F  *  C  *  K  Y  H  S  E  W  G  S  S  H  G  *  E  G  T  F  R  A  P  G  T  N  G  E  A  E  E  W  I  Y  G  I  L  G  I  F  W  R  H  F  P  V  N  L  H  Y  K  M  L  C  V  C  R  E  T  P  *  T  F  I  L  Q  S  S  A  H  V  *  L  Q  V  E  R  K  E  S  S  S  S  V  A  C  H  L  N  F  M  G  Q  N  L  C  V  L  E  I  S  *  I  M  Y  H  N  G  F  F  P  A  G  L  A  V  Y  F  C  R  D  I  Y  *  F  D  L  V  *  F  N  *  E  A  L  V  C  F  E  I  V  C  H  A  S  I  D  S  *  I  P  A  R  *  L  K  L  L  *  A  V  *  *  L  F  N  V  E  I  F  L  F  S  R  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0127N23.1" strand="-"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="91857" stop="91760"/>
                    <exon start="91655" stop="91499"/>
                    <exon start="91414" stop="91301"/>
                    <exon start="91175" stop="91080"/>
                    <exon start="90987" stop="90916"/>
                    <exon start="90833" stop="90551"/>
                    <exon start="90433" stop="90168"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1083</number_coding_nucleotides>
                  <number_encoded_amino_acids>361</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VLQSTIYDVDLDRILQSIHIYLQELGMEEIRRRAGADDKPLRMVKTVLHELVKLRGTAIKGHLSMVPIDMQPPPIILAYIDLNLQTLAAARMLTPSVPGQTHWGDSAANNPAPATHNADAQLKQELAAIFKKIGDKQTCTIGLYELYRITQLYPKVDIFAQLQNASEAFRTYIRDGLAQMEKNAAAGRTPSSVPMPTPPPSSLNLSSPKFGPLSPVNTNPLNDAKSVNNKIEPSHFSLPPSYGEDDRGGNALPSRGLSSEHLELQRNDRLPSGVTSGTLEAIRERMKSISLATTVGNADPSNRPLMSMNGNISHVVSNHGPGTEHSSVENTIQSGVLPMDEKALSGLQARMERLKSGSMEF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="18" PGL_strand="-" PGL_start="94349" PGL_stop="92218"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="94349" e_stop="94311"/>
            <exon e_start="93941" e_stop="93879"/>
            <exon e_start="93788" e_stop="93662"/>
            <exon e_start="92947" e_stop="92825"/>
            <exon e_start="92738" e_stop="92661"/>
            <exon e_start="92520" e_stop="92362"/>
            <exon e_start="92262" e_stop="92218"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.987" acc_prob="0.999" e_score="0.974"/>
          <exon-intron don_prob="0.904" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.938" acc_prob="0.966" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.897" e_score="1.000"/>
          <exon-intron don_prob="0.976" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.899" acc_prob="0.929" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.974">
            <gDNA_exon_boundary e_start="94349" e_stop="94311" e_length="39"/>
          </exon>
          <intron i_serial="1" don_prob="0.987" acc_prob="0.999">
            <gDNA_intron_boundary i_start="94310" i_stop="93942" i_length="369"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="93941" e_stop="93879" e_length="63"/>
          </exon>
          <intron i_serial="2" don_prob="0.904" acc_prob="0.999">
            <gDNA_intron_boundary i_start="93878" i_stop="93789" i_length="90"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="93788" e_stop="93662" e_length="127"/>
          </exon>
          <intron i_serial="3" don_prob="0.938" acc_prob="0.966">
            <gDNA_intron_boundary i_start="93661" i_stop="92948" i_length="714"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="92947" e_stop="92825" e_length="123"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="0.897">
            <gDNA_intron_boundary i_start="92824" i_stop="92739" i_length="86"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="92738" e_stop="92661" e_length="78"/>
          </exon>
          <intron i_serial="5" don_prob="0.976" acc_prob="0.998">
            <gDNA_intron_boundary i_start="92660" i_stop="92521" i_length="140"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="92520" e_stop="92362" e_length="159"/>
          </exon>
          <intron i_serial="6" don_prob="0.899" acc_prob="0.929">
            <gDNA_intron_boundary i_start="92361" i_stop="92263" i_length="99"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="92262" e_stop="92218" e_length="45"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94349" stop="94311"/>
              <exon start="93941" stop="93879"/>
              <exon start="93788" stop="93662"/>
              <exon start="92947" stop="92825"/>
              <exon start="92738" stop="92661"/>
              <exon start="92520" stop="92362"/>
              <exon start="92262" stop="92218"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U604144" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGCTAGGGCTGCTTTAAGGCGTTCAGTGAGGGATAACGG : GACTGATCTGGCAGAGCCGAGCGGTGAAGTTTCACGGTCGACAGCTGGCCCAATCTTAAATAG : GGATATATATAACAATACAGAGCTTCCCATGGAAAGAAATGTGAATCTACGGCCAGTTGCCGGTACAATTGGTCCATCAGACTGGAATGAAGCTCTTGATATTATATCATATGATTCTCCCGAGCAG : TCTGTTGAAGGAATGAAAGTTGTGTGCCATTTGTTGGCCCTAGCAACCAATGATCCTGAAGGCAGTGCCATGGATGAAATTGTCAAAGATGCAGATAGGCTTGTTTCCTGCTTAGCAAATAAG : GTAGCAAAAACTTTTGACTTCAGTCTGATGGGTGCATCTTCAAGATCTTGCAAATATGTTCTTAACACACTCATGCAG : ACATTTCAGAATAAAACGCTTTCTCATGCTGTAAAGGAGCGTACCCTAGATATCCTCATTACTGAACTTTTGCTTTGGCTTCTTGATGAGAGAGTACCCCGCATGGATGATGGCAGTCAGCTCTTGAAAGCGTTGAATGTTCTGATGCTAAAAATCTTG : GACAATGCTGATAGAACATCCTCCTTCGTTGTGCTGATTAATCTA</gDNA_template>
            <first_frame> S  *  G  C  F  K  A  F  S  E  G  *  R  :  D  *  S  G  R  A  E  R  *  S  F  T  V  D  S  W  P  N  L  K  *  :  G  Y  I  *  Q  Y  R  A  S  H  G  K  K  C  E  S  T  A  S  C  R  Y  N  W  S  I  R  L  E  *  S  S  *  Y  Y  I  I  *  F  S  R  A   : V  C  *  R  N  E  S  C  V  P  F  V  G  P  S  N  Q  *  S  *  R  Q  C  H  G  *  N  C  Q  R  C  R  *  A  C  F  L  L  S  K  *   : G  S  K  N  F  *  L  Q  S  D  G  C  I  F  K  I  L  Q  I  C  S  *  H  T  H  A   : D  I  S  E  *  N  A  F  S  C  C  K  G  A  Y  P  R  Y  P  H  Y  *  T  F  A  L  A  S  *  *  E  S  T  P  H  G  *  W  Q  S  A  L  E  S  V  E  C  S  D  A  K  N  L   : G  Q  C  *  *  N  I  L  L  R  C  A  D  *  S  </first_frame>
            <second_frame>  A  R  A  A  L  R  R  S  V  R  D  N  G :   T  D  L  A  E  P  S  G  E  V  S  R  S  T  A  G  P  I  L  N  R :   D  I  Y  N  N  T  E  L  P  M  E  R  N  V  N  L  R  P  V  A  G  T  I  G  P  S  D  W  N  E  A  L  D  I  I  S  Y  D  S  P  E  Q  :  S  V  E  G  M  K  V  V  C  H  L  L  A  L  A  T  N  D  P  E  G  S  A  M  D  E  I  V  K  D  A  D  R  L  V  S  C  L  A  N  K  :  V  A  K  T  F  D  F  S  L  M  G  A  S  S  R  S  C  K  Y  V  L  N  T  L  M  Q  :  T  F  Q  N  K  T  L  S  H  A  V  K  E  R  T  L  D  I  L  I  T  E  L  L  L  W  L  L  D  E  R  V  P  R  M  D  D  G  S  Q  L  L  K  A  L  N  V  L  M  L  K  I  L  :  D  N  A  D  R  T  S  S  F  V  V  L  I  N  L </second_frame>
            <third_frame>   L  G  L  L  *  G  V  Q  *  G  I  T   : G  L  I  W  Q  S  R  A  V  K  F  H  G  R  Q  L  A  Q  S  *  I   : G  I  Y  I  T  I  Q  S  F  P  W  K  E  M  *  I  Y  G  Q  L  P  V  Q  L  V  H  Q  T  G  M  K  L  L  I  L  Y  H  M  I  L  P  S  S :   L  L  K  E  *  K  L  C  A  I  C  W  P  *  Q  P  M  I  L  K  A  V  P  W  M  K  L  S  K  M  Q  I  G  L  F  P  A  *  Q  I  R :   *  Q  K  L  L  T  S  V  *  W  V  H  L  Q  D  L  A  N  M  F  L  T  H  S  C  R :   H  F  R  I  K  R  F  L  M  L  *  R  S  V  P  *  I  S  S  L  L  N  F  C  F  G  F  L  M  R  E  Y  P  A  W  M  M  A  V  S  S  *  K  R  *  M  F  *  C  *  K  S  W :   T  M  L  I  E  H  P  P  S  L  C  *  L  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0127N23.1" strand="-"/>
                <serials PGL_serial="18" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="94348" stop="94311"/>
                    <exon start="93941" stop="93879"/>
                    <exon start="93788" stop="93662"/>
                    <exon start="92947" stop="92825"/>
                    <exon start="92738" stop="92661"/>
                    <exon start="92520" stop="92362"/>
                    <exon start="92262" stop="92218"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>633</number_coding_nucleotides>
                  <number_encoded_amino_acids>211</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ARAALRRSVRDNGTDLAEPSGEVSRSTAGPILNRDIYNNTELPMERNVNLRPVAGTIGPSDWNEALDIISYDSPEQSVEGMKVVCHLLALATNDPEGSAMDEIVKDADRLVSCLANKVAKTFDFSLMGASSRSCKYVLNTLMQTFQNKTLSHAVKERTLDILITELLLWLLDERVPRMDDGSQLLKALNVLMLKILDNADRTSSFVVLINL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="19" PGL_strand="+" PGL_start="128746" PGL_stop="130065"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="128746" e_stop="129140"/>
            <exon e_start="129764" e_stop="130065"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.946" e_score="0.990"/>
          <exon-only e_score="0.950"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.990">
            <gDNA_exon_boundary e_start="128746" e_stop="129140" e_length="395"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.946">
            <gDNA_intron_boundary i_start="129141" i_stop="129763" i_length="623"/>
          </intron>
          <exon e_serial="2" e_score="0.950">
            <gDNA_exon_boundary e_start="129764" e_stop="130065" e_length="302"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="128746" stop="129140"/>
              <exon start="129764" stop="130026"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U582950" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="128753" stop="129140"/>
              <exon start="129764" stop="130065"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U582951" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAATACACCTCAAACAAGCAAAGTTATGTCTTCCATTCTATTTCCCACTACCAATACTCTCTCTTCTTCAACTACCAACACTTTTTCCAACTTGCATTCTTCTCCTTTCTTTGCAAAAACATCAAAAATTTCCTCCATTAGAAAGCATAATGTCCATCGTAATTTCCAGGTATCTTGCAAAACCATAGATGATAATAATCACGAACACAACTCACCCGTCGACATTTCTAAAAAGAACGATTCTTCAAACAATATGATCGATAGAAGAAACGTTCTACTTGGATTAGGAGGTTTATATGGTGCTTCTACTCTTGTTGGTGGTCTTCCCTTCGTCCTTGCCGCTCCGGTGAACGGACCCGACGTTACCAAATGTGGGGCCGCAGACTTGCCACCAG : GTGCAGAACTGGTTAATTGTTGTCCTCCGATGAGCGGAAGTATCATCGACTTCCAGCTTCCGTCGTCATCCACCCCACTCCGTACACGGCCAGCAGCTCATTCCGTGGATAGTGCCTACATTGAGAAATTCAACAGAGCTATTCAGCTGATGAAGCAACTTCCTGACGACGATCCACGTAGCTTCAAACAACAAGCAAATATTCACTGTGCTTATTGTGATGGTGCTTATGATCAATTAGGGTTCCCAAATTCAGAGCTCCAAGTTCATTCCTCTTGGATTTTTCTTCCATTTCATCGTTGT</gDNA_template>
            <first_frame> E  Y  T  S  N  K  Q  S  Y  V  F  H  S  I  S  H  Y  Q  Y  S  L  F  F  N  Y  Q  H  F  F  Q  L  A  F  F  S  F  L  C  K  N  I  K  N  F  L  H  *  K  A  *  C  P  S  *  F  P  G  I  L  Q  N  H  R  *  *  *  S  R  T  Q  L  T  R  R  H  F  *  K  E  R  F  F  K  Q  Y  D  R  *  K  K  R  S  T  W  I  R  R  F  I  W  C  F  Y  S  C  W  W  S  S  L  R  P  C  R  S  G  E  R  T  R  R  Y  Q  M  W  G  R  R  L  A  T  R :   C  R  T  G  *  L  L  S  S  D  E  R  K  Y  H  R  L  P  A  S  V  V  I  H  P  T  P  Y  T  A  S  S  S  F  R  G  *  C  L  H  *  E  I  Q  Q  S  Y  S  A  D  E  A  T  S  *  R  R  S  T  *  L  Q  T  T  S  K  Y  S  L  C  L  L  *  W  C  L  *  S  I  R  V  P  K  F  R  A  P  S  S  F  L  L  D  F  S  S  I  S  S  L  </first_frame>
            <second_frame>  N  T  P  Q  T  S  K  V  M  S  S  I  L  F  P  T  T  N  T  L  S  S  S  T  T  N  T  F  S  N  L  H  S  S  P  F  F  A  K  T  S  K  I  S  S  I  R  K  H  N  V  H  R  N  F  Q  V  S  C  K  T  I  D  D  N  N  H  E  H  N  S  P  V  D  I  S  K  K  N  D  S  S  N  N  M  I  D  R  R  N  V  L  L  G  L  G  G  L  Y  G  A  S  T  L  V  G  G  L  P  F  V  L  A  A  P  V  N  G  P  D  V  T  K  C  G  A  A  D  L  P  P   : G  A  E  L  V  N  C  C  P  P  M  S  G  S  I  I  D  F  Q  L  P  S  S  S  T  P  L  R  T  R  P  A  A  H  S  V  D  S  A  Y  I  E  K  F  N  R  A  I  Q  L  M  K  Q  L  P  D  D  D  P  R  S  F  K  Q  Q  A  N  I  H  C  A  Y  C  D  G  A  Y  D  Q  L  G  F  P  N  S  E  L  Q  V  H  S  S  W  I  F  L  P  F  H  R  C </second_frame>
            <third_frame>   I  H  L  K  Q  A  K  L  C  L  P  F  Y  F  P  L  P  I  L  S  L  L  Q  L  P  T  L  F  P  T  C  I  L  L  L  S  L  Q  K  H  Q  K  F  P  P  L  E  S  I  M  S  I  V  I  S  R  Y  L  A  K  P  *  M  I  I  I  T  N  T  T  H  P  S  T  F  L  K  R  T  I  L  Q  T  I  *  S  I  E  E  T  F  Y  L  D  *  E  V  Y  M  V  L  L  L  L  L  V  V  F  P  S  S  L  P  L  R  *  T  D  P  T  L  P  N  V  G  P  Q  T  C  H  Q  :  V  Q  N  W  L  I  V  V  L  R  *  A  E  V  S  S  T  S  S  F  R  R  H  P  P  H  S  V  H  G  Q  Q  L  I  P  W  I  V  P  T  L  R  N  S  T  E  L  F  S  *  *  S  N  F  L  T  T  I  H  V  A  S  N  N  K  Q  I  F  T  V  L  I  V  M  V  L  M  I  N  *  G  S  Q  I  Q  S  S  K  F  I  P  L  G  F  F  F  H  F  I  V   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0127N23.1" strand="+"/>
                <serials PGL_serial="19" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="128747" stop="129140"/>
                    <exon start="129764" stop="130065"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>696</number_coding_nucleotides>
                  <number_encoded_amino_acids>232</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NTPQTSKVMSSILFPTTNTLSSSTTNTFSNLHSSPFFAKTSKISSIRKHNVHRNFQVSCKTIDDNNHEHNSPVDISKKNDSSNNMIDRRNVLLGLGGLYGASTLVGGLPFVLAAPVNGPDVTKCGAADLPPGAELVNCCPPMSGSIIDFQLPSSSTPLRTRPAAHSVDSAYIEKFNRAIQLMKQLPDDDPRSFKQQANIHCAYCDGAYDQLGFPNSELQVHSSWIFLPFHRC</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="20" PGL_strand="+" PGL_start="130685" PGL_stop="131542"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="130685" e_stop="131542"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="130685" e_stop="131542" e_length="858"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="130685" stop="131542"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U574784" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="20" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GATACGTTTATCAAAACGTAAGGAATCAATGGATAAATTCGCGACCAACGCCTAGAGTATCGCGGGCGTTGAGTAGCGTAAGGAGGCTCGTTGAAGCCAGAGCAGCTGATGACAATAATAATAATATTATGAATTTTCCTAGACCAAAAGAAATATTTCCTACGAAACTTGACCATGTTATAAAAGTTATGGTAAAAAGGCCAAACAAGAAGAAGAGGAACAAAAAGGAGAAAAACGAGAGAGAGGAGATTTTAATTGTTGAAGGACTAGAAGTGGAGAGTGATGTGTTTGTTAAGTTTGATGTTTTGATCAATGACGAAGATGAAACACTGATTTCACCAGATAATGCTGAGTTTGCTGGAAGTTTTGTGAACGTACCACATCATAGTCATGGTAAAGGTGAGAAAAATTCGAAACGAAAAACGAAGCTAAAATTAGCGATAACTGAGTTGTTGGAGGATTTGGATGCTGAAAATGATGATAATGTGTTGGTGACTTTTGTACCCAAGAATGGTTCTGGTGCTGTTAAAATTGGGGGTGTTAAGATTGTGCTTGAGGATTAGAAGGAAAAAAAAAAGAACAAGTCATTTTAATTAAATCAAAATAATATAAGCATTTCTTGATGTATTTTCTTTTAATTAATATCCTACTGTTTCTGATTAATGTTGCATTTGGACAATGTAACTTGTGTAGACATGATGTTTGCATGGAATAAAGGAAGGAAAAGTAGTTGGATATATTTTTACGTAATTATTTTGTCTCATTTTGACTGAGAAAAAAAAGAGAGAGAGGAATTATATATTGTGTAAAATTTCTTGTATGACTTTGAAATAAAATGTATTCTCAGTTTCATTTTAC</gDNA_template>
            <first_frame> D  T  F  I  K  T  *  G  I  N  G  *  I  R  D  Q  R  L  E  Y  R  G  R  *  V  A  *  G  G  S  L  K  P  E  Q  L  M  T  I  I  I  I  L  *  I  F  L  D  Q  K  K  Y  F  L  R  N  L  T  M  L  *  K  L  W  *  K  G  Q  T  R  R  R  G  T  K  R  R  K  T  R  E  R  R  F  *  L  L  K  D  *  K  W  R  V  M  C  L  L  S  L  M  F  *  S  M  T  K  M  K  H  *  F  H  Q  I  M  L  S  L  L  E  V  L  *  T  Y  H  I  I  V  M  V  K  V  R  K  I  R  N  E  K  R  S  *  N  *  R  *  L  S  C  W  R  I  W  M  L  K  M  M  I  M  C  W  *  L  L  Y  P  R  M  V  L  V  L  L  K  L  G  V  L  R  L  C  L  R  I  R  R  K  K  K  R  T  S  H  F  N  *  I  K  I  I  *  A  F  L  D  V  F  S  F  N  *  Y  P  T  V  S  D  *  C  C  I  W  T  M  *  L  V  *  T  *  C  L  H  G  I  K  E  G  K  V  V  G  Y  I  F  T  *  L  F  C  L  I  L  T  E  K  K  K  R  E  R  N  Y  I  L  C  K  I  S  C  M  T  L  K  *  N  V  F  S  V  S  F  Y </first_frame>
            <second_frame>  I  R  L  S  K  R  K  E  S  M  D  K  F  A  T  N  A  *  S  I  A  G  V  E  *  R  K  E  A  R  *  S  Q  S  S  *  *  Q  *  *  *  Y  Y  E  F  S  *  T  K  R  N  I  S  Y  E  T  *  P  C  Y  K  S  Y  G  K  K  A  K  Q  E  E  E  E  Q  K  G  E  K  R  E  R  G  D  F  N  C  *  R  T  R  S  G  E  *  C  V  C  *  V  *  C  F  D  Q  *  R  R  *  N  T  D  F  T  R  *  C  *  V  C  W  K  F  C  E  R  T  T  S  *  S  W  *  R  *  E  K  F  E  T  K  N  E  A  K  I  S  D  N  *  V  V  G  G  F  G  C  *  K  *  *  *  C  V  G  D  F  C  T  Q  E  W  F  W  C  C  *  N  W  G  C  *  D  C  A  *  G  L  E  G  K  K  K  E  Q  V  I  L  I  K  S  K  *  Y  K  H  F  L  M  Y  F  L  L  I  N  I  L  L  F  L  I  N  V  A  F  G  Q  C  N  L  C  R  H  D  V  C  M  E  *  R  K  E  K  *  L  D  I  F  L  R  N  Y  F  V  S  F  *  L  R  K  K  R  E  R  G  I  I  Y  C  V  K  F  L  V  *  L  *  N  K  M  Y  S  Q  F  H  F   </second_frame>
            <third_frame>   Y  V  Y  Q  N  V  R  N  Q  W  I  N  S  R  P  T  P  R  V  S  R  A  L  S  S  V  R  R  L  V  E  A  R  A  A  D  D  N  N  N  N  I  M  N  F  P  R  P  K  E  I  F  P  T  K  L  D  H  V  I  K  V  M  V  K  R  P  N  K  K  K  R  N  K  K  E  K  N  E  R  E  E  I  L  I  V  E  G  L  E  V  E  S  D  V  F  V  K  F  D  V  L  I  N  D  E  D  E  T  L  I  S  P  D  N  A  E  F  A  G  S  F  V  N  V  P  H  H  S  H  G  K  G  E  K  N  S  K  R  K  T  K  L  K  L  A  I  T  E  L  L  E  D  L  D  A  E  N  D  D  N  V  L  V  T  F  V  P  K  N  G  S  G  A  V  K  I  G  G  V  K  I  V  L  E  D  *  K  E  K  K  K  N  K  S  F  *  L  N  Q  N  N  I  S  I  S  *  C  I  F  F  *  L  I  S  Y  C  F  *  L  M  L  H  L  D  N  V  T  C  V  D  M  M  F  A  W  N  K  G  R  K  S  S  W  I  Y  F  Y  V  I  I  L  S  H  F  D  *  E  K  K  E  R  E  E  L  Y  I  V  *  N  F  L  Y  D  F  E  I  K  C  I  L  S  F  I  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0127N23.1" strand="+"/>
                <serials PGL_serial="20" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="130687" stop="131247"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>558</number_coding_nucleotides>
                  <number_encoded_amino_acids>186</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YVYQNVRNQWINSRPTPRVSRALSSVRRLVEARAADDNNNNIMNFPRPKEIFPTKLDHVIKVMVKRPNKKKRNKKEKNEREEILIVEGLEVESDVFVKFDVLINDEDETLISPDNAEFAGSFVNVPHHSHGKGEKNSKRKTKLKLAITELLEDLDAENDDNVLVTFVPKNGSGAVKIGGVKIVLED*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="21" PGL_strand="+" PGL_start="136478" PGL_stop="137181"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="136478" e_stop="137181"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.974"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.974">
            <gDNA_exon_boundary e_start="136478" e_stop="137181" e_length="704"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="136478" stop="137181"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U600426" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="21" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGGAGGAGGTGGTGGTGGTGGTGGTGGGAGTGCAGATATTGGTTTCATAGGATGTTGTGGTGTTGCTACATTGGCTGATGCCATGGGAGGTGGAGGAGGAGGAGGAGGAGGCTGTGGAACACCACTTGGTTTTGCTAACAATGGAGCAGGCCTTGACCCTTCTGCATTCCCTGATGAATTGGGTACTGGTGGAGGTGGGGGTGGTGGTTGTGGTGCTGCTGGTGCAAAAGTCGATGGTTGGTTCAATGATATATCTCCATCTGGTGTGAGTAAAGAAATTTGCAGAGTAGATGTTGGTTTTTGCGAGTCTATGACATTCAACGACAAAGTGAGTGGTGATTGTTGCCCTGCTCCTTGTTCTGGAAGTGAAGGAGGTAAAAGCACATCCAAGGTAACATGTCCTGACACTGGTAGATTATTTTTGACACCAGTTTTACATGTTCCTTCATTTTCTGGTTGAGCATCCATACTAGTCGGTAGAATATCTGGTGAGTCTGTCATTTCACAATCTTGTCCAAACTCCTCATCATCTTTGGTTTTCACTTGAGAATCTTTCTCCGCTTCTACATCTGACTTTTGTTCATTAACTGTGCTTGTTAATTGAACAACAAAATTTGAATCTTGAGCTGCTACATTTGGAAACATATGAAAAGAGAGACGCTTTACATCAATAGGATTCAGCTTGCCAACTGCTTGAACCCTGA</gDNA_template>
            <first_frame> G  R  R  W  W  W  W  W  W  E  C  R  Y  W  F  H  R  M  L  W  C  C  Y  I  G  *  C  H  G  R  W  R  R  R  R  R  R  L  W  N  T  T  W  F  C  *  Q  W  S  R  P  *  P  F  C  I  P  *  *  I  G  Y  W  W  R  W  G  W  W  L  W  C  C  W  C  K  S  R  W  L  V  Q  *  Y  I  S  I  W  C  E  *  R  N  L  Q  S  R  C  W  F  L  R  V  Y  D  I  Q  R  Q  S  E  W  *  L  L  P  C  S  L  F  W  K  *  R  R  *  K  H  I  Q  G  N  M  S  *  H  W  *  I  I  F  D  T  S  F  T  C  S  F  I  F  W  L  S  I  H  T  S  R  *  N  I  W  *  V  C  H  F  T  I  L  S  K  L  L  I  I  F  G  F  H  L  R  I  F  L  R  F  Y  I  *  L  L  F  I  N  C  A  C  *  L  N  N  K  I  *  I  L  S  C  Y  I  W  K  H  M  K  R  E  T  L  Y  I  N  R  I  Q  L  A  N  C  L  N  P   </first_frame>
            <second_frame>  G  G  G  G  G  G  G  G  G  S  A  D  I  G  F  I  G  C  C  G  V  A  T  L  A  D  A  M  G  G  G  G  G  G  G  G  G  C  G  T  P  L  G  F  A  N  N  G  A  G  L  D  P  S  A  F  P  D  E  L  G  T  G  G  G  G  G  G  G  C  G  A  A  G  A  K  V  D  G  W  F  N  D  I  S  P  S  G  V  S  K  E  I  C  R  V  D  V  G  F  C  E  S  M  T  F  N  D  K  V  S  G  D  C  C  P  A  P  C  S  G  S  E  G  G  K  S  T  S  K  V  T  C  P  D  T  G  R  L  F  L  T  P  V  L  H  V  P  S  F  S  G  *  A  S  I  L  V  G  R  I  S  G  E  S  V  I  S  Q  S  C  P  N  S  S  S  S  L  V  F  T  *  E  S  F  S  A  S  T  S  D  F  C  S  L  T  V  L  V  N  *  T  T  K  F  E  S  *  A  A  T  F  G  N  I  *  K  E  R  R  F  T  S  I  G  F  S  L  P  T  A  *  T  L  </second_frame>
            <third_frame>   E  E  V  V  V  V  V  V  G  V  Q  I  L  V  S  *  D  V  V  V  L  L  H  W  L  M  P  W  E  V  E  E  E  E  E  E  A  V  E  H  H  L  V  L  L  T  M  E  Q  A  L  T  L  L  H  S  L  M  N  W  V  L  V  E  V  G  V  V  V  V  V  L  L  V  Q  K  S  M  V  G  S  M  I  Y  L  H  L  V  *  V  K  K  F  A  E  *  M  L  V  F  A  S  L  *  H  S  T  T  K  *  V  V  I  V  A  L  L  L  V  L  E  V  K  E  V  K  A  H  P  R  *  H  V  L  T  L  V  D  Y  F  *  H  Q  F  Y  M  F  L  H  F  L  V  E  H  P  Y  *  S  V  E  Y  L  V  S  L  S  F  H  N  L  V  Q  T  P  H  H  L  W  F  S  L  E  N  L  S  P  L  L  H  L  T  F  V  H  *  L  C  L  L  I  E  Q  Q  N  L  N  L  E  L  L  H  L  E  T  Y  E  K  R  D  A  L  H  Q  *  D  S  A  C  Q  L  L  E  P  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0127N23.1" strand="+"/>
                <serials PGL_serial="21" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="136479" stop="136937"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>456</number_coding_nucleotides>
                  <number_encoded_amino_acids>152</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GGGGGGGGGSADIGFIGCCGVATLADAMGGGGGGGGGCGTPLGFANNGAGLDPSAFPDELGTGGGGGGGCGAAGAKVDGWFNDISPSGVSKEICRVDVGFCESMTFNDKVSGDCCPAPCSGSEGGKSTSKVTCPDTGRLFLTPVLHVPSFSG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="22" PGL_strand="-" PGL_start="139392" PGL_stop="137616"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="139392" e_stop="138994"/>
            <exon e_start="138324" e_stop="138103"/>
            <exon e_start="137885" e_stop="137790"/>
            <exon e_start="137691" e_stop="137616"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.994" e_score="0.867"/>
          <exon-intron don_prob="0.982" acc_prob="0.926" e_score="0.995"/>
          <exon-intron don_prob="0.983" acc_prob="0.487" e_score="0.990"/>
          <exon-only e_score="0.961"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.867">
            <gDNA_exon_boundary e_start="139392" e_stop="138994" e_length="399"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.994">
            <gDNA_intron_boundary i_start="138993" i_stop="138325" i_length="669"/>
          </intron>
          <exon e_serial="2" e_score="0.995">
            <gDNA_exon_boundary e_start="138324" e_stop="138103" e_length="222"/>
          </exon>
          <intron i_serial="2" don_prob="0.982" acc_prob="0.926">
            <gDNA_intron_boundary i_start="138102" i_stop="137886" i_length="217"/>
          </intron>
          <exon e_serial="3" e_score="0.990">
            <gDNA_exon_boundary e_start="137885" e_stop="137790" e_length="96"/>
          </exon>
          <intron i_serial="3" don_prob="0.983" acc_prob="0.487">
            <gDNA_intron_boundary i_start="137789" i_stop="137692" i_length="98"/>
          </intron>
          <exon e_serial="4" e_score="0.961">
            <gDNA_exon_boundary e_start="137691" e_stop="137616" e_length="76"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="139392" stop="138994"/>
              <exon start="138324" stop="138103"/>
              <exon start="137885" stop="137790"/>
              <exon start="137691" stop="137616"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U566739" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="22" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TATTAAATTATTCCTATTTTGCTCTGCACGTTATATGAGTCTTCTTTAATTTATCAATTTTCCTACAACTATTATTACTACATTATTTTTTAATCAATCCAACAAACAAAACATTATAATTTTTTTATTTTTTTTTAATAATAAAAATAATATTGAATGCTCTTGTTCTTCTTCCTCCTCCTCCAACATTCTTCTAATAATTTCTATTATTTTATTGTTTTCATTCACCGTTTTTTTGCGTCAGCAGATAATATTGTCAAAGTTGACCTGGTAAAATCATTTTTGTGTTTTTTTTCAATATTGTATAAAACTTGGTATTTCTCATTAGAAATGGCCATTGGAGCATGCTTTGGTGTGCCTCCTTTCTTTTCACGCAGGAAGCATACTACAACCTATCAG : GAAGAAGAGATGAAAGAGACAAAGAGAAGTCCTGTTGTTGAAAAGAAGAAAACACCTCCCATAGCAGTATCAAAAAGTTTTAAATCCAAAGGTTCCACGGTTCGTAATTCATCTAGAGTAGCAGGGAACTTCATAATAATGACTGAGCTTCGGAACAAGATCCTTACCTTGAGAGACTTGCTCGACTTGTCCCCTTGTATTGGCTCTGCATCTGTAAATGAG : CTGCTGCTTTTGACGCTGAAAGACCTGCAACAACTGTATCCTACAATGAATCCATCTATTTCTTTGTCAAAAATTGATGAAGCACCGATGCAGCAG : GCACTGCAATTCTTCTTTGATACTCTGATATCAATTGGGGAAATGTGGACAGGCAATGATGAGTGGATGGTCAAAT</gDNA_template>
            <first_frame> Y  *  I  I  P  I  L  L  C  T  L  Y  E  S  S  L  I  Y  Q  F  S  Y  N  Y  Y  Y  Y  I  I  F  *  S  I  Q  Q  T  K  H  Y  N  F  F  I  F  F  *  *  *  K  *  Y  *  M  L  L  F  F  F  L  L  L  Q  H  S  S  N  N  F  Y  Y  F  I  V  F  I  H  R  F  F  A  S  A  D  N  I  V  K  V  D  L  V  K  S  F  L  C  F  F  S  I  L  Y  K  T  W  Y  F  S  L  E  M  A  I  G  A  C  F  G  V  P  P  F  F  S  R  R  K  H  T  T  T  Y  Q  :  E  E  E  M  K  E  T  K  R  S  P  V  V  E  K  K  K  T  P  P  I  A  V  S  K  S  F  K  S  K  G  S  T  V  R  N  S  S  R  V  A  G  N  F  I  I  M  T  E  L  R  N  K  I  L  T  L  R  D  L  L  D  L  S  P  C  I  G  S  A  S  V  N  E  :  L  L  L  L  T  L  K  D  L  Q  Q  L  Y  P  T  M  N  P  S  I  S  L  S  K  I  D  E  A  P  M  Q  Q  :  A  L  Q  F  F  F  D  T  L  I  S  I  G  E  M  W  T  G  N  D  E  W  M  V  K  </first_frame>
            <second_frame>  I  K  L  F  L  F  C  S  A  R  Y  M  S  L  L  *  F  I  N  F  P  T  T  I  I  T  T  L  F  F  N  Q  S  N  K  Q  N  I  I  I  F  L  F  F  F  N  N  K  N  N  I  E  C  S  C  S  S  S  S  S  S  N  I  L  L  I  I  S  I  I  L  L  F  S  F  T  V  F  L  R  Q  Q  I  I  L  S  K  L  T  W  *  N  H  F  C  V  F  F  Q  Y  C  I  K  L  G  I  S  H  *  K  W  P  L  E  H  A  L  V  C  L  L  S  F  H  A  G  S  I  L  Q  P  I  R :   K  K  R  *  K  R  Q  R  E  V  L  L  L  K  R  R  K  H  L  P  *  Q  Y  Q  K  V  L  N  P  K  V  P  R  F  V  I  H  L  E  *  Q  G  T  S  *  *  *  L  S  F  G  T  R  S  L  P  *  E  T  C  S  T  C  P  L  V  L  A  L  H  L  *  M  S :   C  C  F  *  R  *  K  T  C  N  N  C  I  L  Q  *  I  H  L  F  L  C  Q  K  L  M  K  H  R  C  S  R :   H  C  N  S  S  L  I  L  *  Y  Q  L  G  K  C  G  Q  A  M  M  S  G  W  S  N </second_frame>
            <third_frame>   L  N  Y  S  Y  F  A  L  H  V  I  *  V  F  F  N  L  S  I  F  L  Q  L  L  L  L  H  Y  F  L  I  N  P  T  N  K  T  L  *  F  F  Y  F  F  L  I  I  K  I  I  L  N  A  L  V  L  L  P  P  P  P  T  F  F  *  *  F  L  L  F  Y  C  F  H  S  P  F  F  C  V  S  R  *  Y  C  Q  S  *  P  G  K  I  I  F  V  F  F  F  N  I  V  *  N  L  V  F  L  I  R  N  G  H  W  S  M  L  W  C  A  S  F  L  F  T  Q  E  A  Y  Y  N  L  S   : G  R  R  D  E  R  D  K  E  K  S  C  C  *  K  E  E  N  T  S  H  S  S  I  K  K  F  *  I  Q  R  F  H  G  S  *  F  I  *  S  S  R  E  L  H  N  N  D  *  A  S  E  Q  D  P  Y  L  E  R  L  A  R  L  V  P  L  Y  W  L  C  I  C  K  *   : A  A  A  F  D  A  E  R  P  A  T  T  V  S  Y  N  E  S  I  Y  F  F  V  K  N  *  *  S  T  D  A  A   : G  T  A  I  L  L  *  Y  S  D  I  N  W  G  N  V  D  R  Q  *  *  V  D  G  Q   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0127N23.1" strand="-"/>
                <serials PGL_serial="22" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="139236" stop="138994"/>
                    <exon start="138324" stop="138103"/>
                    <exon start="137885" stop="137790"/>
                    <exon start="137691" stop="137617"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>636</number_coding_nucleotides>
                  <number_encoded_amino_acids>212</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MLLFFFLLLQHSSNNFYYFIVFIHRFFASADNIVKVDLVKSFLCFFSILYKTWYFSLEMAIGACFGVPPFFSRRKHTTTYQEEEMKETKRSPVVEKKKTPPIAVSKSFKSKGSTVRNSSRVAGNFIIMTELRNKILTLRDLLDLSPCIGSASVNELLLLTLKDLQQLYPTMNPSISLSKIDEAPMQQALQFFFDTLISIGEMWTGNDEWMVK</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="23" PGL_strand="-" PGL_start="143014" PGL_stop="141414"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="143014" e_stop="142050"/>
            <exon e_start="141955" e_stop="141414"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="1.000" e_score="0.997"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="143014" e_stop="142050" e_length="965"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="1.000">
            <gDNA_intron_boundary i_start="142049" i_stop="141956" i_length="94"/>
          </intron>
          <exon e_serial="2" e_score="0.996">
            <gDNA_exon_boundary e_start="141955" e_stop="141414" e_length="542"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143014" stop="142272"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U571157" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="142324" stop="142050"/>
              <exon start="141955" stop="141414"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U571158" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="23" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGGAGCCAAGTATGAATGGGACCAGTGACCAGCTACCTTTGGACTTCCAGGATGAAGGCTATGGGATCAAGAATTCTGGTGAGAAGGTCAGAAGAGACCATCTGACACCTGATGATTCTCTTATGAGCAAAAATCATGAAGATAATGGCACAAAGGTTAACATGGTAGATTTTGCCAATGGTGAGGATATGAGGCCAAGTTTGAAGAAAGGAGTTTCTGAAGATGTGCATCTTCTATTTTCGCACAAAGAACCATCAGGAGGCAATACATTGGGAACTCCATCTGATTTTGGTTCTGAATCCTCTGCTATTAGAAATAGTAATGGGGAAGATTGGTTTGTTGTCAACCACTCCGGCAGTTCAGAAACTCAAGAGACTAGGCGAATGATATTTGACAATGACAGTAGCATGTCAACTCAGAAAAGTTCCTCTCAAGTCGAAAGTGAAAGAGCTGCTCCTATTGATGATTCTTTCATGGTACAGTCTCGACCAGCTTTTGATGATCAATATGGTTCTCAGTGGAAAACAGACATTGGCATGGATGCAGACTTGGTTGCTGCAGCAAATGCTGAAAATAGTGATCCAGTTGCATCAAAAACCAAGCTTAGTACATATGGGACCAGTCAACCTGATGACCTCTGTGTGGTGCTGGCAAGAGAAACTAGTTTGGATCCTCTTGAGGCATCTTGGCAACCAGAATTGGATTTTCAGATTGAAGCTTCTTTCATTCAAGTTGATAAAAAATCTTCTGCAGTTGAGGCAAAACCTCCTCCTACTGAAGAAACTGTTCCTGTGAAAGGTAAAAGCACAACTAAGAAGGACAGTCTTGCAAAGACCGGAAAAGATGCAAGGTCTAAAGTCTCCCCAGGATCTCTGTCAAGGAGCAGGATTGATGCTTTAGCAAAGAGCAAGAAGATGTCTCCTCCTACTAACAAACTGACAACCCAGAAGAGCAAATTAGATCGG : GACGAAGAAATGCGCAAGAGAATGGAAGAATTAGTGATCGAGAGGCAAAAGAGGATTGCAGAAAGAAGTGCAGCTAAGGGTTCGTCCCCAGCAGCTTCCAAGAAAGGGCCAGCAGGAAGTAAAACAGCTTCAAAGATCTCACCTTCATCCAAACTTCACACATTTCCAGTGCAGGTCAAGCATTAAGGAGCAATCCATCAAGGAAAAGTATGATCCGACCTTAAAATATATTTGATTGCTTTGCCGCGAATATGGAACATCCACAATTCACTGCTTTGTGCACATTGGATTATCCACAAATATATCTTGGAGAAATAAAATATTTTCGATGAAAATTATAGATTTTTTTCTTTACTAGGACAGCTCTGCTTGCTGGCTTGATGCAAGTTATTCCTTCTCATTTATTTAGACATTCATGTCCCATCATAAGGTTTTGCCAGTATAGTTGCTTGAGGCTTTATTATTATTTGTATATTGCTATTTGTTCATATGTTGTGTAAAGTTATATTTAAATCTACCTGTGAGTTAAAACTTCTAATACC</gDNA_template>
            <first_frame> R  S  Q  V  *  M  G  P  V  T  S  Y  L  W  T  S  R  M  K  A  M  G  S  R  I  L  V  R  R  S  E  E  T  I  *  H  L  M  I  L  L  *  A  K  I  M  K  I  M  A  Q  R  L  T  W  *  I  L  P  M  V  R  I  *  G  Q  V  *  R  K  E  F  L  K  M  C  I  F  Y  F  R  T  K  N  H  Q  E  A  I  H  W  E  L  H  L  I  L  V  L  N  P  L  L  L  E  I  V  M  G  K  I  G  L  L  S  T  T  P  A  V  Q  K  L  K  R  L  G  E  *  Y  L  T  M  T  V  A  C  Q  L  R  K  V  P  L  K  S  K  V  K  E  L  L  L  L  M  I  L  S  W  Y  S  L  D  Q  L  L  M  I  N  M  V  L  S  G  K  Q  T  L  A  W  M  Q  T  W  L  L  Q  Q  M  L  K  I  V  I  Q  L  H  Q  K  P  S  L  V  H  M  G  P  V  N  L  M  T  S  V  W  C  W  Q  E  K  L  V  W  I  L  L  R  H  L  G  N  Q  N  W  I  F  R  L  K  L  L  S  F  K  L  I  K  N  L  L  Q  L  R  Q  N  L  L  L  L  K  K  L  F  L  *  K  V  K  A  Q  L  R  R  T  V  L  Q  R  P  E  K  M  Q  G  L  K  S  P  Q  D  L  C  Q  G  A  G  L  M  L  *  Q  R  A  R  R  C  L  L  L  L  T  N  *  Q  P  R  R  A  N  *  I  G :   T  K  K  C  A  R  E  W  K  N  *  *  S  R  G  K  R  G  L  Q  K  E  V  Q  L  R  V  R  P  Q  Q  L  P  R  K  G  Q  Q  E  V  K  Q  L  Q  R  S  H  L  H  P  N  F  T  H  F  Q  C  R  S  S  I  K  E  Q  S  I  K  E  K  Y  D  P  T  L  K  Y  I  *  L  L  C  R  E  Y  G  T  S  T  I  H  C  F  V  H  I  G  L  S  T  N  I  S  W  R  N  K  I  F  S  M  K  I  I  D  F  F  L  Y  *  D  S  S  A  C  W  L  D  A  S  Y  S  F  S  F  I  *  T  F  M  S  H  H  K  V  L  P  V  *  L  L  E  A  L  L  L  F  V  Y  C  Y  L  F  I  C  C  V  K  L  Y  L  N  L  P  V  S  *  N  F  *  Y  </first_frame>
            <second_frame>  G  A  K  Y  E  W  D  Q  *  P  A  T  F  G  L  P  G  *  R  L  W  D  Q  E  F  W  *  E  G  Q  K  R  P  S  D  T  *  *  F  S  Y  E  Q  K  S  *  R  *  W  H  K  G  *  H  G  R  F  C  Q  W  *  G  Y  E  A  K  F  E  E  R  S  F  *  R  C  A  S  S  I  F  A  Q  R  T  I  R  R  Q  Y  I  G  N  S  I  *  F  W  F  *  I  L  C  Y  *  K  *  *  W  G  R  L  V  C  C  Q  P  L  R  Q  F  R  N  S  R  D  *  A  N  D  I  *  Q  *  Q  *  H  V  N  S  E  K  F  L  S  S  R  K  *  K  S  C  S  Y  *  *  F  F  H  G  T  V  S  T  S  F  *  *  S  I  W  F  S  V  E  N  R  H  W  H  G  C  R  L  G  C  C  S  K  C  *  K  *  *  S  S  C  I  K  N  Q  A  *  Y  I  W  D  Q  S  T  *  *  P  L  C  G  A  G  K  R  N  *  F  G  S  S  *  G  I  L  A  T  R  I  G  F  S  D  *  S  F  F  H  S  S  *  *  K  I  F  C  S  *  G  K  T  S  S  Y  *  R  N  C  S  C  E  R  *  K  H  N  *  E  G  Q  S  C  K  D  R  K  R  C  K  V  *  S  L  P  R  I  S  V  K  E  Q  D  *  C  F  S  K  E  Q  E  D  V  S  S  Y  *  Q  T  D  N  P  E  E  Q  I  R  S   : G  R  R  N  A  Q  E  N  G  R  I  S  D  R  E  A  K  E  D  C  R  K  K  C  S  *  G  F  V  P  S  S  F  Q  E  R  A  S  R  K  *  N  S  F  K  D  L  T  F  I  Q  T  S  H  I  S  S  A  G  Q  A  L  R  S  N  P  S  R  K  S  M  I  R  P  *  N  I  F  D  C  F  A  A  N  M  E  H  P  Q  F  T  A  L  C  T  L  D  Y  P  Q  I  Y  L  G  E  I  K  Y  F  R  *  K  L  *  I  F  F  F  T  R  T  A  L  L  A  G  L  M  Q  V  I  P  S  H  L  F  R  H  S  C  P  I  I  R  F  C  Q  Y  S  C  L  R  L  Y  Y  Y  L  Y  I  A  I  C  S  Y  V  V  *  S  Y  I  *  I  Y  L  *  V  K  T  S  N  T </second_frame>
            <third_frame>   E  P  S  M  N  G  T  S  D  Q  L  P  L  D  F  Q  D  E  G  Y  G  I  K  N  S  G  E  K  V  R  R  D  H  L  T  P  D  D  S  L  M  S  K  N  H  E  D  N  G  T  K  V  N  M  V  D  F  A  N  G  E  D  M  R  P  S  L  K  K  G  V  S  E  D  V  H  L  L  F  S  H  K  E  P  S  G  G  N  T  L  G  T  P  S  D  F  G  S  E  S  S  A  I  R  N  S  N  G  E  D  W  F  V  V  N  H  S  G  S  S  E  T  Q  E  T  R  R  M  I  F  D  N  D  S  S  M  S  T  Q  K  S  S  S  Q  V  E  S  E  R  A  A  P  I  D  D  S  F  M  V  Q  S  R  P  A  F  D  D  Q  Y  G  S  Q  W  K  T  D  I  G  M  D  A  D  L  V  A  A  A  N  A  E  N  S  D  P  V  A  S  K  T  K  L  S  T  Y  G  T  S  Q  P  D  D  L  C  V  V  L  A  R  E  T  S  L  D  P  L  E  A  S  W  Q  P  E  L  D  F  Q  I  E  A  S  F  I  Q  V  D  K  K  S  S  A  V  E  A  K  P  P  P  T  E  E  T  V  P  V  K  G  K  S  T  T  K  K  D  S  L  A  K  T  G  K  D  A  R  S  K  V  S  P  G  S  L  S  R  S  R  I  D  A  L  A  K  S  K  K  M  S  P  P  T  N  K  L  T  T  Q  K  S  K  L  D  R  :  D  E  E  M  R  K  R  M  E  E  L  V  I  E  R  Q  K  R  I  A  E  R  S  A  A  K  G  S  S  P  A  A  S  K  K  G  P  A  G  S  K  T  A  S  K  I  S  P  S  S  K  L  H  T  F  P  V  Q  V  K  H  *  G  A  I  H  Q  G  K  V  *  S  D  L  K  I  Y  L  I  A  L  P  R  I  W  N  I  H  N  S  L  L  C  A  H  W  I  I  H  K  Y  I  L  E  K  *  N  I  F  D  E  N  Y  R  F  F  S  L  L  G  Q  L  C  L  L  A  *  C  K  L  F  L  L  I  Y  L  D  I  H  V  P  S  *  G  F  A  S  I  V  A  *  G  F  I  I  I  C  I  L  L  F  V  H  M  L  C  K  V  I  F  K  S  T  C  E  L  K  L  L  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0127N23.1" strand="-"/>
                <serials PGL_serial="23" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="143012" stop="142050"/>
                    <exon start="141955" stop="141770"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1146</number_coding_nucleotides>
                  <number_encoded_amino_acids>382</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EPSMNGTSDQLPLDFQDEGYGIKNSGEKVRRDHLTPDDSLMSKNHEDNGTKVNMVDFANGEDMRPSLKKGVSEDVHLLFSHKEPSGGNTLGTPSDFGSESSAIRNSNGEDWFVVNHSGSSETQETRRMIFDNDSSMSTQKSSSQVESERAAPIDDSFMVQSRPAFDDQYGSQWKTDIGMDADLVAAANAENSDPVASKTKLSTYGTSQPDDLCVVLARETSLDPLEASWQPELDFQIEASFIQVDKKSSAVEAKPPPTEETVPVKGKSTTKKDSLAKTGKDARSKVSPGSLSRSRIDALAKSKKMSPPTNKLTTQKSKLDRDEEMRKRMEELVIERQKRIAERSAAKGSSPAASKKGPAGSKTASKISPSSKLHTFPVQVKH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="24" PGL_strand="-" PGL_start="143573" PGL_stop="143243"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="143573" e_stop="143243"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.979"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.979">
            <gDNA_exon_boundary e_start="143573" e_stop="143243" e_length="331"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143573" stop="143243"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U566503" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="24" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CCACAAAATGTAAATGGCTCCACAAATGGTTCTGTTAGGGACTCTCACAAACGCTCAAAGAAGAAGGAGAAATCCAAAGAACATAACAGTTCAGAAGATGATGAACAGACTGAGTCGAGTGCCTCTGATTCTGGAACTGATTCAGATGAAGTTAGGAAGCATGAGAAAAAGCATTCTTCAAGGGAGAACTCACATGCTAAAAAGCACAAGAAGAAATCCTCAAAAAGAGTTGTAATCCGCAACATCAATTATATCACTTCCAATAGAAAGAATGAGGAAAATGATGGATCTTCTTATGATTCATCTTCAGCTGAATCTCATTTACTCGATG</gDNA_template>
            <first_frame> P  Q  N  V  N  G  S  T  N  G  S  V  R  D  S  H  K  R  S  K  K  K  E  K  S  K  E  H  N  S  S  E  D  D  E  Q  T  E  S  S  A  S  D  S  G  T  D  S  D  E  V  R  K  H  E  K  K  H  S  S  R  E  N  S  H  A  K  K  H  K  K  K  S  S  K  R  V  V  I  R  N  I  N  Y  I  T  S  N  R  K  N  E  E  N  D  G  S  S  Y  D  S  S  S  A  E  S  H  L  L  D  </first_frame>
            <second_frame>  H  K  M  *  M  A  P  Q  M  V  L  L  G  T  L  T  N  A  Q  R  R  R  R  N  P  K  N  I  T  V  Q  K  M  M  N  R  L  S  R  V  P  L  I  L  E  L  I  Q  M  K  L  G  S  M  R  K  S  I  L  Q  G  R  T  H  M  L  K  S  T  R  R  N  P  Q  K  E  L  *  S  A  T  S  I  I  S  L  P  I  E  R  M  R  K  M  M  D  L  L  M  I  H  L  Q  L  N  L  I  Y  S  M </second_frame>
            <third_frame>   T  K  C  K  W  L  H  K  W  F  C  *  G  L  S  Q  T  L  K  E  E  G  E  I  Q  R  T  *  Q  F  R  R  *  *  T  D  *  V  E  C  L  *  F  W  N  *  F  R  *  S  *  E  A  *  E  K  A  F  F  K  G  E  L  T  C  *  K  A  Q  E  E  I  L  K  K  S  C  N  P  Q  H  Q  L  Y  H  F  Q  *  K  E  *  G  K  *  W  I  F  L  *  F  I  F  S  *  I  S  F  T  R   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0127N23.1" strand="-"/>
                <serials PGL_serial="24" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="143573" stop="143244"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>330</number_coding_nucleotides>
                  <number_encoded_amino_acids>110</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PQNVNGSTNGSVRDSHKRSKKKEKSKEHNSSEDDEQTESSASDSGTDSDEVRKHEKKHSSRENSHAKKHKKKSSKRVVIRNINYITSNRKNEENDGSSYDSSSAESHLLD</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="25" PGL_strand="-" PGL_start="146437" PGL_stop="144083"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="146437" e_stop="146177"/>
            <exon e_start="146038" e_stop="145862"/>
            <exon e_start="145470" e_stop="145349"/>
            <exon e_start="145193" e_stop="145141"/>
            <exon e_start="145047" e_stop="144995"/>
            <exon e_start="144904" e_stop="144752"/>
            <exon e_start="144240" e_stop="144083"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.832" acc_prob="0.941" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.895" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="146437" e_stop="146177" e_length="261"/>
          </exon>
          <intron i_serial="1" don_prob="0.832" acc_prob="0.941">
            <gDNA_intron_boundary i_start="146176" i_stop="146039" i_length="138"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="146038" e_stop="145862" e_length="177"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.985">
            <gDNA_intron_boundary i_start="145861" i_stop="145471" i_length="391"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="145470" e_stop="145349" e_length="122"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.991">
            <gDNA_intron_boundary i_start="145348" i_stop="145194" i_length="155"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="145193" e_stop="145141" e_length="53"/>
          </exon>
          <intron i_serial="4" don_prob="0.997" acc_prob="1.000">
            <gDNA_intron_boundary i_start="145140" i_stop="145048" i_length="93"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="145047" e_stop="144995" e_length="53"/>
          </exon>
          <intron i_serial="5" don_prob="0.998" acc_prob="0.994">
            <gDNA_intron_boundary i_start="144994" i_stop="144905" i_length="90"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="144904" e_stop="144752" e_length="153"/>
          </exon>
          <intron i_serial="6" don_prob="0.895" acc_prob="0.999">
            <gDNA_intron_boundary i_start="144751" i_stop="144241" i_length="511"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="144240" e_stop="144083" e_length="158"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="146437" stop="146177"/>
              <exon start="146038" stop="145862"/>
              <exon start="145470" stop="145349"/>
              <exon start="145193" stop="145141"/>
              <exon start="145047" stop="144995"/>
              <exon start="144904" stop="144801"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U589069" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="146413" stop="146177"/>
              <exon start="146038" stop="145862"/>
              <exon start="145470" stop="145349"/>
              <exon start="145193" stop="145141"/>
              <exon start="145047" stop="144995"/>
              <exon start="144904" stop="144752"/>
              <exon start="144240" stop="144083"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U563119" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="25" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATCTCTCCATGTGCAATTCTTGCCATTGCTTCATCATTTCTTGCTGGCAATTTTTCTTCCATTTACAGTTCAACAAAAAGATTTCTCAAATGTCACGTTCTTGAACATGTCTTTGTTCTTTACAACCATTTCTTTTGCTATTTGAGTTTCATTTTTTCACCATTTTCTCCCCTTTGTCCACTAAGCTTTGCTTTAGTTAAACATGGATTCCAAGACCCTTCTTGATTATGCACTGTTTCAGCTCACCCCAACTAGAACAAG : ATGTGATCTTGTGGTGTTTTCTGGGGGTAAAAATGAGAAATTGGCATCTGGGTTGGTGGAACCATTCATTTCTCACTTGAAATTTGCTAAAGATCAGATTCCAAAAGGTGGGTATTCAATCACTATGAGGCCACCTTCAACTCATGCCTACTGGTTCACCAAAGCCACATTCCTAAG : ATTTGTACGCTTTGTTAGTACACCTGAAATTCTTGAGAGGTTTATGCGATTGGAACGAGAGATCTCACAGATCGAGAGTTCCATTCAATCCAATGAATGCTCCAATGGCAATTCAGAGGAAG : GAAGCTCACCAGCTAATAGTGAGAGCACCAGGAAATCAAACGATTCGTTCAAG : GCAAAATCTGAAGTTGAAGAAGCTAATAATGCTGCACCTAAAGAAAACTCCAA : GATTCACCTTCAACGCCACCTGGATACCCGAAAGGCATTACTTAGGAAAGAGCAGGCCATGGCTTATGCGCGTGCAACCGTTGCAGGCTTTGAGATAGACCAATTGGATGATCTCATACAGTTTGCTAATTCTTTTGGTGCAGTACGTCTTAG : GGATGCATGTGTAGATTTCAAGGAACTTTACAAACAAAAGCACACAGATGGACAATGGATGGATGAGGTAGCTGCAATGAAGGCATGTACACCAATGGATCTATCGTACTTGGGAAATCAAGGTGTTATTCTTGCATATGACAATAATGGCTCTTTGG</gDNA_template>
            <first_frame> I  S  P  C  A  I  L  A  I  A  S  S  F  L  A  G  N  F  S  S  I  Y  S  S  T  K  R  F  L  K  C  H  V  L  E  H  V  F  V  L  Y  N  H  F  F  C  Y  L  S  F  I  F  S  P  F  S  P  L  C  P  L  S  F  A  L  V  K  H  G  F  Q  D  P  S  *  L  C  T  V  S  A  H  P  N  *  N  K  :  M  *  S  C  G  V  F  W  G  *  K  *  E  I  G  I  W  V  G  G  T  I  H  F  S  L  E  I  C  *  R  S  D  S  K  R  W  V  F  N  H  Y  E  A  T  F  N  S  C  L  L  V  H  Q  S  H  I  P  K  :  I  C  T  L  C  *  Y  T  *  N  S  *  E  V  Y  A  I  G  T  R  D  L  T  D  R  E  F  H  S  I  Q  *  M  L  Q  W  Q  F  R  G  R :   K  L  T  S  *  *  *  E  H  Q  E  I  K  R  F  V  Q   : G  K  I  *  S  *  R  S  *  *  C  C  T  *  R  K  L  Q  :  D  S  P  S  T  P  P  G  Y  P  K  G  I  T  *  E  R  A  G  H  G  L  C  A  C  N  R  C  R  L  *  D  R  P  I  G  *  S  H  T  V  C  *  F  F  W  C  S  T  S  *  :  G  C  M  C  R  F  Q  G  T  L  Q  T  K  A  H  R  W  T  M  D  G  *  G  S  C  N  E  G  M  Y  T  N  G  S  I  V  L  G  K  S  R  C  Y  S  C  I  *  Q  *  W  L  F   </first_frame>
            <second_frame>  S  L  H  V  Q  F  L  P  L  L  H  H  F  L  L  A  I  F  L  P  F  T  V  Q  Q  K  D  F  S  N  V  T  F  L  N  M  S  L  F  F  T  T  I  S  F  A  I  *  V  S  F  F  H  H  F  L  P  F  V  H  *  A  L  L  *  L  N  M  D  S  K  T  L  L  D  Y  A  L  F  Q  L  T  P  T  R  T  R :   C  D  L  V  V  F  S  G  G  K  N  E  K  L  A  S  G  L  V  E  P  F  I  S  H  L  K  F  A  K  D  Q  I  P  K  G  G  Y  S  I  T  M  R  P  P  S  T  H  A  Y  W  F  T  K  A  T  F  L  R :   F  V  R  F  V  S  T  P  E  I  L  E  R  F  M  R  L  E  R  E  I  S  Q  I  E  S  S  I  Q  S  N  E  C  S  N  G  N  S  E  E   : G  S  S  P  A  N  S  E  S  T  R  K  S  N  D  S  F  K  :  A  K  S  E  V  E  E  A  N  N  A  A  P  K  E  N  S  K :   I  H  L  Q  R  H  L  D  T  R  K  A  L  L  R  K  E  Q  A  M  A  Y  A  R  A  T  V  A  G  F  E  I  D  Q  L  D  D  L  I  Q  F  A  N  S  F  G  A  V  R  L  R :   D  A  C  V  D  F  K  E  L  Y  K  Q  K  H  T  D  G  Q  W  M  D  E  V  A  A  M  K  A  C  T  P  M  D  L  S  Y  L  G  N  Q  G  V  I  L  A  Y  D  N  N  G  S  L  </second_frame>
            <third_frame>   L  S  M  C  N  S  C  H  C  F  I  I  S  C  W  Q  F  F  F  H  L  Q  F  N  K  K  I  S  Q  M  S  R  S  *  T  C  L  C  S  L  Q  P  F  L  L  L  F  E  F  H  F  F  T  I  F  S  P  L  S  T  K  L  C  F  S  *  T  W  I  P  R  P  F  L  I  M  H  C  F  S  S  P  Q  L  E  Q   : D  V  I  L  W  C  F  L  G  V  K  M  R  N  W  H  L  G  W  W  N  H  S  F  L  T  *  N  L  L  K  I  R  F  Q  K  V  G  I  Q  S  L  *  G  H  L  Q  L  M  P  T  G  S  P  K  P  H  S  *   : D  L  Y  A  L  L  V  H  L  K  F  L  R  G  L  C  D  W  N  E  R  S  H  R  S  R  V  P  F  N  P  M  N  A  P  M  A  I  Q  R  K  :  E  A  H  Q  L  I  V  R  A  P  G  N  Q  T  I  R  S  R :   Q  N  L  K  L  K  K  L  I  M  L  H  L  K  K  T  P   : R  F  T  F  N  A  T  W  I  P  E  R  H  Y  L  G  K  S  R  P  W  L  M  R  V  Q  P  L  Q  A  L  R  *  T  N  W  M  I  S  Y  S  L  L  I  L  L  V  Q  Y  V  L   : G  M  H  V  *  I  S  R  N  F  T  N  K  S  T  Q  M  D  N  G  W  M  R  *  L  Q  *  R  H  V  H  Q  W  I  Y  R  T  W  E  I  K  V  L  F  L  H  M  T  I  M  A  L  W </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0127N23.1" strand="-"/>
                <serials PGL_serial="25" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="146241" stop="146177"/>
                    <exon start="146038" stop="145862"/>
                    <exon start="145470" stop="145349"/>
                    <exon start="145193" stop="145141"/>
                    <exon start="145047" stop="144995"/>
                    <exon start="144904" stop="144752"/>
                    <exon start="144240" stop="144084"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>780</number_coding_nucleotides>
                  <number_encoded_amino_acids>260</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LNMDSKTLLDYALFQLTPTRTRCDLVVFSGGKNEKLASGLVEPFISHLKFAKDQIPKGGYSITMRPPSTHAYWFTKATFLRFVRFVSTPEILERFMRLEREISQIESSIQSNECSNGNSEEGSSPANSESTRKSNDSFKAKSEVEEANNAAPKENSKIHLQRHLDTRKALLRKEQAMAYARATVAGFEIDQLDDLIQFANSFGAVRLRDACVDFKELYKQKHTDGQWMDEVAAMKACTPMDLSYLGNQGVILAYDNNGSL</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0127N23.1" strand="-"/>
                <serials PGL_serial="25" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="146437" stop="146213"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>222</number_coding_nucleotides>
                  <number_encoded_amino_acids>74</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ISPCAILAIASSFLAGNFSSIYSSTKRFLKCHVLEHVFVLYNHFFCYLSFIFSPFSPLCPLSFALVKHGFQDPS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="146389" e_stop="145862"/>
            <exon e_start="145470" e_stop="145349"/>
            <exon e_start="145193" e_stop="145141"/>
            <exon e_start="145047" e_stop="144995"/>
            <exon e_start="144904" e_stop="144871"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.985" e_score="0.972"/>
          <exon-intron don_prob="0.999" acc_prob="0.991" e_score="0.984"/>
          <exon-intron don_prob="0.997" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.994" e_score="1.000"/>
          <exon-only e_score="0.971"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.972">
            <gDNA_exon_boundary e_start="146389" e_stop="145862" e_length="528"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.985">
            <gDNA_intron_boundary i_start="145861" i_stop="145471" i_length="391"/>
          </intron>
          <exon e_serial="2" e_score="0.984">
            <gDNA_exon_boundary e_start="145470" e_stop="145349" e_length="122"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.991">
            <gDNA_intron_boundary i_start="145348" i_stop="145194" i_length="155"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="145193" e_stop="145141" e_length="53"/>
          </exon>
          <intron i_serial="3" don_prob="0.997" acc_prob="1.000">
            <gDNA_intron_boundary i_start="145140" i_stop="145048" i_length="93"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="145047" e_stop="144995" e_length="53"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="0.994">
            <gDNA_intron_boundary i_start="144994" i_stop="144905" i_length="90"/>
          </intron>
          <exon e_serial="5" e_score="0.971">
            <gDNA_exon_boundary e_start="144904" e_stop="144871" e_length="34"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="146389" stop="145862"/>
              <exon start="145470" stop="145349"/>
              <exon start="145193" stop="145141"/>
              <exon start="145047" stop="144995"/>
              <exon start="144904" stop="144871"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U589068" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="25" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AATTTTTCTTCCATTTACAGTTCAACAAAAAGATTTCTCAAATGTCACGTTCTTGAACATGTCTTTGTTCTTTACAACCATTTCTTTTGCTATTTGAGTTTCATTTTTTCACCATTTTCTCCCCTTTGTCCACTAAGCTTTGCTTTAGTTAAACATGGATTCCAAGACCCTTCTTGATTATGCACTGTTTCAGCTCACCCCAACTAGAACAAGGTTGGTTTTGCTTTAAACACCCCCCCCCCCCCTCTCCACACAAAGTTTGTGTTAACTGTTTTTTTAGCTTTGTATTGTGATGGAAACTGATAAAGATTTGATTTTTTGTGTGTTTTTGATTTGTGGGTATTGAAAAAGATGTGATCTTGTGGTGTTTTCTGGGGGTAAAAATGAGAAATTGGCATCTGGGTTGGTGGAACCATTCATTTCTCACTTGAAATTTGCTAAAGATCAGATTCCAAAAGGTGGGTATTCAATCACTATGAGGCCACCTTCAACTCATGCCTACTGGTTCACCAAAGCCACATTCCTAAG : ATTTGTACGCTTTGTTAGTACACCTGAAATTCTTGAGAGGTTTATGCGATTGGAACGAGAGATCTCACAGATCGAGAGTTCCATTCAATCCAATGAATGCTCCAATGGCAATTCAGAGGAAG : GAAGCTCACCAGCTAATAGTGAGAGCACCAGGAAATCAAACGATTCGTTCAAG : GCAAAATCTGAAGTTGAAGAAGCTAATAATGCTGCACCTAAAGAAAACTCCAA : GATTCACCTTCAACGCCACCTGGATACCCGAAAG</gDNA_template>
            <first_frame> N  F  S  S  I  Y  S  S  T  K  R  F  L  K  C  H  V  L  E  H  V  F  V  L  Y  N  H  F  F  C  Y  L  S  F  I  F  S  P  F  S  P  L  C  P  L  S  F  A  L  V  K  H  G  F  Q  D  P  S  *  L  C  T  V  S  A  H  P  N  *  N  K  V  G  F  A  L  N  T  P  P  P  P  L  H  T  K  F  V  L  T  V  F  L  A  L  Y  C  D  G  N  *  *  R  F  D  F  L  C  V  F  D  L  W  V  L  K  K  M  *  S  C  G  V  F  W  G  *  K  *  E  I  G  I  W  V  G  G  T  I  H  F  S  L  E  I  C  *  R  S  D  S  K  R  W  V  F  N  H  Y  E  A  T  F  N  S  C  L  L  V  H  Q  S  H  I  P  K  :  I  C  T  L  C  *  Y  T  *  N  S  *  E  V  Y  A  I  G  T  R  D  L  T  D  R  E  F  H  S  I  Q  *  M  L  Q  W  Q  F  R  G  R :   K  L  T  S  *  *  *  E  H  Q  E  I  K  R  F  V  Q   : G  K  I  *  S  *  R  S  *  *  C  C  T  *  R  K  L  Q  :  D  S  P  S  T  P  P  G  Y  P  K  </first_frame>
            <second_frame>  I  F  L  P  F  T  V  Q  Q  K  D  F  S  N  V  T  F  L  N  M  S  L  F  F  T  T  I  S  F  A  I  *  V  S  F  F  H  H  F  L  P  F  V  H  *  A  L  L  *  L  N  M  D  S  K  T  L  L  D  Y  A  L  F  Q  L  T  P  T  R  T  R  L  V  L  L  *  T  P  P  P  P  L  S  T  Q  S  L  C  *  L  F  F  *  L  C  I  V  M  E  T  D  K  D  L  I  F  C  V  F  L  I  C  G  Y  *  K  R  C  D  L  V  V  F  S  G  G  K  N  E  K  L  A  S  G  L  V  E  P  F  I  S  H  L  K  F  A  K  D  Q  I  P  K  G  G  Y  S  I  T  M  R  P  P  S  T  H  A  Y  W  F  T  K  A  T  F  L  R :   F  V  R  F  V  S  T  P  E  I  L  E  R  F  M  R  L  E  R  E  I  S  Q  I  E  S  S  I  Q  S  N  E  C  S  N  G  N  S  E  E   : G  S  S  P  A  N  S  E  S  T  R  K  S  N  D  S  F  K  :  A  K  S  E  V  E  E  A  N  N  A  A  P  K  E  N  S  K :   I  H  L  Q  R  H  L  D  T  R  K </second_frame>
            <third_frame>   F  F  F  H  L  Q  F  N  K  K  I  S  Q  M  S  R  S  *  T  C  L  C  S  L  Q  P  F  L  L  L  F  E  F  H  F  F  T  I  F  S  P  L  S  T  K  L  C  F  S  *  T  W  I  P  R  P  F  L  I  M  H  C  F  S  S  P  Q  L  E  Q  G  W  F  C  F  K  H  P  P  P  P  S  P  H  K  V  C  V  N  C  F  F  S  F  V  L  *  W  K  L  I  K  I  *  F  F  V  C  F  *  F  V  G  I  E  K  D  V  I  L  W  C  F  L  G  V  K  M  R  N  W  H  L  G  W  W  N  H  S  F  L  T  *  N  L  L  K  I  R  F  Q  K  V  G  I  Q  S  L  *  G  H  L  Q  L  M  P  T  G  S  P  K  P  H  S  *   : D  L  Y  A  L  L  V  H  L  K  F  L  R  G  L  C  D  W  N  E  R  S  H  R  S  R  V  P  F  N  P  M  N  A  P  M  A  I  Q  R  K  :  E  A  H  Q  L  I  V  R  A  P  G  N  Q  T  I  R  S  R :   Q  N  L  K  L  K  K  L  I  M  L  H  L  K  K  T  P   : R  F  T  F  N  A  T  W  I  P  E   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0127N23.1" strand="-"/>
                <serials PGL_serial="25" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="146043" stop="145862"/>
                    <exon start="145470" stop="145349"/>
                    <exon start="145193" stop="145141"/>
                    <exon start="145047" stop="144995"/>
                    <exon start="144904" stop="144871"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>444</number_coding_nucleotides>
                  <number_encoded_amino_acids>148</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KRCDLVVFSGGKNEKLASGLVEPFISHLKFAKDQIPKGGYSITMRPPSTHAYWFTKATFLRFVRFVSTPEILERFMRLEREISQIESSIQSNECSNGNSEEGSSPANSESTRKSNDSFKAKSEVEEANNAAPKENSKIHLQRHLDTRK</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 62 chains have been computed
$ 
$ memory statistics:
$ 70592 bytes spliced alignments in total
$ 32 spliced alignments have been stored
$ 2206 bytes was the average size of a spliced alignment
$ 36176 bytes predicted gene locations in total
$ 25 predicted gene locations have been stored
$ 1447 bytes was the average size of a predicted gene location
$ 5 megabytes was the average size of the backtrace matrix
$ 68 backtrace matrices have been allocated
$ 
$ date finished: 2009-12-01 12:10:54
-->
