<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-12-01 11:35:29"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02SLm0108P14-gayoB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02SLm0108P14-gayoB/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0108P14-gayoB/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E379648" ref_strand="+" ref_description="SGN-E379648 [TUS-1-M11](-)">
      <seq>agaggaagtatgacattattcttggagtggctcgaggaatcgggtatttgcatcgaggctgtgatgtacgaatattgcattgtgacatcaaaccacacaacattctcttggatgagaatttcattccaaagatttctgactttgggcttgcgaaactatatccaacagataagagcattgtgactctcacagctgctcgtggaacgattggatatgttgctccagagttgatcagcagaagcattggagcaatctcgtacaaagctgatgtttacagcttcggaatgctgctaatggaaatgttggacttgaagagaaatgaagttgcaaatgaagagaattccagccaatattttccttataatatttacgatacgttcaacaaggggaaagagattgtggtggatgaagaagcaaatgatgatgaaaagaagatggctagaaagctgagtttggttgcgttatggtgcatacaaacaaatccgatactacgcccttcaatgagtaaagtagtacaaatgcttgaaggcgaagttgaagcgctagaagtacctcctcagcctcttcaatctccaccgattgtccatcagatcatggaaagttctacgacattatcgtctgattcaatagctttgttagatcattccgttgaggtagacatttatgctgattgattatagttgatgtaatgtttatgtgaaatagacatagcaaatccaacatcttcccgaagtgagatagaatacaaaataaacaaataa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0108P14-gayoB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0108P14.2" temp_strand="-" temp_description="C02SLm0108P14.2  AC215490.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0108P14 sequenced_by:kribb upload_account_name:korea">
        <position start="13995" stop="12744"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13695" g_stop="12982" g_length="714"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="702" r_length="702" r_score="0.908"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0108P14.2" gen_strand="-" ref_id="SGN-E379648" ref_strand="+">
        <total_alignment_score>0.908</total_alignment_score>
        <cumulative_length_of_scored_exons>714</cumulative_length_of_scored_exons>
        <coverage percentage="0.938" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0108P14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E379648" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13695" e_stop="12982"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGGAAGTATGACATTATTCTTGGAGTGGCTCGAGGAACTGGATATTTGCATCGAGGCTGTGATGTACAAATTTTGCATTTTGACATCAAACCACACAACATTCTTTTGGATGAGAATTTCATTCCAAAGATTTCTGACTTTGGGCTTGCAAAATTATATCCACCAGGTAATAGCATAGTGACTCTCACAGCTGCTCGAGGAACGATTGGCTATGTAGCTCCAGAGTTGATCAGCAGAAGCATCGGGGAAATCTCTTACAAAGCTGATGTTTACAGCTTTGGAATGCTGCTCATGGAAATGCTCGACTTGAAAAGACCTGAAGTTGCAAATGAAGAGAATTCCAGCCAATATTTTCCTTATTATATTTACGATAAGTTCAACAAGGGGAAGGAGATTGTGGTGGATGAAGAAGCAAATGATGATGAAAAGAAGATGGCTAGAAAGCTCGCTTTAGTTGCGTTATGGTGCATACAAACAAATCCGATACAACGCCCTTCGATGAGTAGAGTATTAGAAATGCTTGAAGGTGAAGTTGAAGTGCTAGAAGTACCTCCTCAGCCTCTTCAATCTCAACCGATTGTTCATCAGATCATGGGAAGTTCTATGACATTTTCTTCTGATTCAATGGCTTTGTTAGAAAATACGGCTGATAATCTCGTTGAAGTAGACATTTCTTCTGATTGACCATAGTTGATGTAATATTTATGTGAAA</genome_strand>
        <mrna_strand>AGAGGAAGTATGACATTATTCTTGGAGTGGCTCGAGGAATCGGGTATTTGCATCGAGGCTGTGATGTACGAATATTGCATTGTGACATCAAACCACACAACATTCTCTTGGATGAGAATTTCATTCCAAAGATTTCTGACTTTGGGCTTGCGAAACTATATCCAACAGATAAGAGCATTGTGACTCTCACAGCTGCTCGTGGAACGATTGGATATGTTGCTCCAGAGTTGATCAGCAGAAGCATTGGAGCAATCTCGTACAAAGCTGATGTTTACAGCTTCGGAATGCTGCTAATGGAAATGTTGGACTTGAAGAGAAATGAAGTTGCAAATGAAGAGAATTCCAGCCAATATTTTCCTTATAATATTTACGATACGTTCAACAAGGGGAAAGAGATTGTGGTGGATGAAGAAGCAAATGATGATGAAAAGAAGATGGCTAGAAAGCTGAGTTTGGTTGCGTTATGGTGCATACAAACAAATCCGATACTACGCCCTTCAATGAGTAAAGTAGTACAAATGCTTGAAGGCGAAGTTGAAGCGCTAGAAGTACCTCCTCAGCCTCTTCAATCTCCACCGATTGTCCATCAGATCATGGAAAGTTCTACGACATTATCGTCTGATTCAATAGCTTTGTTAG---AT----C--AT--TC-CGTTGAGGTAGACATTTATGCTGATTGATTATAGTTGATGTAATGTTTATGTGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0108P14-gayoB/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E408998" ref_strand="+" ref_description="SGN-E408998 [PPI-12-H10]">
      <seq>cggattttgcattttgacatcaagccacacaacattcttttggatgagaatttcattccaaagatttctgactttgggcttgcaaaattatatacaacagataatagcattgtgaatctcacagctgctcgtggaacgattggctatgtagctccagaattgatcagcagaagcattggagcaatctcttacaaagctgatgtttacagctttggaatgctgctaatggaaatgctggacttgaatagacatgaagttgcaaatgaagagaattccagccaatattttccttattatatttacgataagttcaacaaggggaaggagatcctggtggatgaagaagcgaatgatgatgaaaagaagatggctagaaagctgagtttagttgcattatggtgcattcaaacgaatccaatacaacgcccttcaatgagtagagtattagaaatgcttngaggtgaagttgaagtgctagaagtacctcctcagcctcttcaatctcaaccgattgttcatcaggtgatgggaagttccatgacattttcgtctgattcaatggggcttgtagaaattctgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0108P14-gayoB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0108P14.2" temp_strand="-" temp_description="C02SLm0108P14.2  AC215490.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0108P14 sequenced_by:kribb upload_account_name:korea">
        <position start="13924" stop="12766"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13627" g_stop="13046" g_length="582"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="581" r_length="581" r_score="0.928"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0108P14.2" gen_strand="-" ref_id="SGN-E408998" ref_strand="+">
        <total_alignment_score>0.928</total_alignment_score>
        <cumulative_length_of_scored_exons>582</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0108P14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E408998" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13627" e_stop="13046"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAATTTTGCATTTTGACATCAAACCACACAACATTCTTTTGGATGAGAATTTCATTCCAAAGATTTCTGACTTTGGGCTTGCAAAATTATATCCACCAGGTAATAGCATAGTGACTCTCACAGCTGCTCGAGGAACGATTGGCTATGTAGCTCCAGAGTTGATCAGCAGAAGCATCGGGGAAATCTCTTACAAAGCTGATGTTTACAGCTTTGGAATGCTGCTCATGGAAATGCTCGACTTGAAAAGACCTGAAGTTGCAAATGAAGAGAATTCCAGCCAATATTTTCCTTATTATATTTACGATAAGTTCAACAAGGGGAAGGAGATTGTGGTGGATGAAGAAGCAAATGATGATGAAAAGAAGATGGCTAGAAAGCTCGCTTTAGTTGCGTTATGGTGCATACAAACAAATCCGATACAACGCCCTTCGATGAGTAGAGTATTAGAAATGCTTGAAGGTGAAGTTGAAGTGCTAGAAGTACCTCCTCAGCCTCTTCAATCTCAACCGATTGTTCATCAGATCATGGGAAGTTCTATGACATTTTCTTCTGATTCAATGGCTTTGTTAGAAAATACGGCT</genome_strand>
        <mrna_strand>CGGATTTTGCATTTTGACATCAAGCCACACAACATTCTTTTGGATGAGAATTTCATTCCAAAGATTTCTGACTTTGGGCTTGCAAAATTATATACAACAGATAATAGCATTGTGAATCTCACAGCTGCTCGTGGAACGATTGGCTATGTAGCTCCAGAATTGATCAGCAGAAGCATTGGAGCAATCTCTTACAAAGCTGATGTTTACAGCTTTGGAATGCTGCTAATGGAAATGCTGGACTTGAATAGACATGAAGTTGCAAATGAAGAGAATTCCAGCCAATATTTTCCTTATTATATTTACGATAAGTTCAACAAGGGGAAGGAGATCCTGGTGGATGAAGAAGCGAATGATGATGAAAAGAAGATGGCTAGAAAGCTGAGTTTAGTTGCATTATGGTGCATTCAAACGAATCCAATACAACGCCCTTCAATGAGTAGAGTATTAGAAATGCTTNGAGGTGAAGTTGAAGTGCTAGAAGTACCTCCTCAGCCTCTTCAATCTCAACCGATTGTTCATCAGGTGATGGGAAGTTCCATGACATTTTCGTCTGATTCAATGGGGCTTGTAG-AAATTCTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0108P14-gayoB/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E613008" ref_strand="+" ref_description="SGN-E613008 [62777]">
      <seq>tgtaaagtatgacattattcttggagtggctcgaggaatcgggtatttgcatcgaggctgtgatgtacgaattgttgcattttgacatcaagccacacaacattcttttggatgagaatttcattccaaagatttctgactttgggcttgcgaaattatatccaacagataagagcattgtcactctcacagctgctcgtggaacgattggatatgttgctccagaactgatcagcagaagcattggagcaatctcgtacaaagctgatgtttacagcttcggaatgctgctaatggaaatgttggacttgaagagaaatgaagttgcaaatgaagagaattccagccaatactttccttataatatttacgataagttcaacaaggggaaagagattgtggtggatgaagaagcgaatgatgatgaaaagaagatggctagaaagctgagtttagttgcattatggtgcatacaaacaaatccgatacaacgcccttctatgagtaaagtagtagaaatgcttgaaggtgaagttgaagtgctagaagtacctcctcaggcctcttcaatctgaaccgattgtccatcagatcatggggaagttctacgacattatcgtctgactcaatagct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0108P14-gayoB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0108P14.2" temp_strand="-" temp_description="C02SLm0108P14.2  AC215490.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0108P14 sequenced_by:kribb upload_account_name:korea">
        <position start="13990" stop="12764"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13694" g_stop="13064" g_length="631"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="634" r_length="634" r_score="0.913"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0108P14.2" gen_strand="-" ref_id="SGN-E613008" ref_strand="+">
        <total_alignment_score>0.913</total_alignment_score>
        <cumulative_length_of_scored_exons>631</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0108P14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E613008" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13694" e_stop="13064"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGGAAGTATGACATTATTCTTGGAGTGGCTCGAGGAACTGGATATTTGCATCGAGGCTGTGATGTACAAATT-TTGCATTTTGACATCAAACCACACAACATTCTTTTGGATGAGAATTTCATTCCAAAGATTTCTGACTTTGGGCTTGCAAAATTATATCCACCAGGTAATAGCATAGTGACTCTCACAGCTGCTCGAGGAACGATTGGCTATGTAGCTCCAGAGTTGATCAGCAGAAGCATCGGGGAAATCTCTTACAAAGCTGATGTTTACAGCTTTGGAATGCTGCTCATGGAAATGCTCGACTTGAAAAGACCTGAAGTTGCAAATGAAGAGAATTCCAGCCAATATTTTCCTTATTATATTTACGATAAGTTCAACAAGGGGAAGGAGATTGTGGTGGATGAAGAAGCAAATGATGATGAAAAGAAGATGGCTAGAAAGCTCGCTTTAGTTGCGTTATGGTGCATACAAACAAATCCGATACAACGCCCTTCGATGAGTAGAGTATTAGAAATGCTTGAAGGTGAAGTTGAAGTGCTAGAAGTACCTCCTCA-GCCTCTTCAATCTCAACCGATTGTTCATCAGATCAT-GGGAAGTTCTATGACATTTTCTTCTGATTCAATGGCT</genome_strand>
        <mrna_strand>TGTAAAGTATGACATTATTCTTGGAGTGGCTCGAGGAATCGGGTATTTGCATCGAGGCTGTGATGTACGAATTGTTGCATTTTGACATCAAGCCACACAACATTCTTTTGGATGAGAATTTCATTCCAAAGATTTCTGACTTTGGGCTTGCGAAATTATATCCAACAGATAAGAGCATTGTCACTCTCACAGCTGCTCGTGGAACGATTGGATATGTTGCTCCAGAACTGATCAGCAGAAGCATTGGAGCAATCTCGTACAAAGCTGATGTTTACAGCTTCGGAATGCTGCTAATGGAAATGTTGGACTTGAAGAGAAATGAAGTTGCAAATGAAGAGAATTCCAGCCAATACTTTCCTTATAATATTTACGATAAGTTCAACAAGGGGAAAGAGATTGTGGTGGATGAAGAAGCGAATGATGATGAAAAGAAGATGGCTAGAAAGCTGAGTTTAGTTGCATTATGGTGCATACAAACAAATCCGATACAACGCCCTTCTATGAGTAAAGTAGTAGAAATGCTTGAAGGTGAAGTTGAAGTGCTAGAAGTACCTCCTCAGGCCTCTTCAATCTGAACCGATTGTCCATCAGATCATGGGGAAGTTCTACGACATTATCGTCTGACTCAATAGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0108P14-gayoB/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E434158" ref_strand="+" ref_description="SGN-E434158 [STM-59-D19]">
      <seq>tgaccagagggtacaaagaaaaattaggtgagggaggttacggcagtgtatacaaaggaaagcttcgaagtggaagggatgtagcagtgaagatgctgaacaagcctaaagctggtggtcaagacttcatgaatgaagtagctaccattggaaggatccatcatgtcaatgtggttggactcgttggatattgtgttgagggaacaaagtgtgctcttgtatacgatttcatgcccaatggatcacttgacaagtatatcagcaccagtcaagaaggaagtcctctgttaagttggcagaggaagtatgacattattcttggagtggctcgaggaattgggtatttgcatcgaggctgtgatgtacggattttgcattttgacatcaagccacacaacattcttttggatgagaatttcattccaaagatttctgactttgggcttgcaaaattatatacaacagataatagcattgtgaatctcacagctgctcgtggaacgattggctatgtagctccagaattgatcagcagaagcattggagcaatctcttacaaagctgatgtttacagctttggaatgctgctaatggaaatgctggacttgaatagacatgaagttgcaaatgaagagaattccagccaatattttccttattatatttacgataagttcaacaaggggaaggagatcctggtggatgaagaagcgaatgatgatgaaaagaaatggctagaaagctgagtttagttgcattatggtgcattcaaacgaatccaatacaacgcccttcaatgagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0108P14-gayoB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0108P14.2" temp_strand="-" temp_description="C02SLm0108P14.2  AC215490.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0108P14 sequenced_by:kribb upload_account_name:korea">
        <position start="14296" stop="12890"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13996" g_stop="13190" g_length="807"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="802" r_length="802" r_score="0.928"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0108P14.2" gen_strand="-" ref_id="SGN-E434158" ref_strand="+">
        <total_alignment_score>0.928</total_alignment_score>
        <cumulative_length_of_scored_exons>807</cumulative_length_of_scored_exons>
        <coverage percentage="1.006" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0108P14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E434158" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13996" e_stop="13190"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGACAAGAGGATTCAAAGAGAAATTAGGTGAGGGAGGTTATGGCAGTGTATACAAAGGAAAGCTTCAAAGTGGAAGGGATGTGGCAGTGAAGATGTTAAGCAAGCCTAAATCTGGTGGGCAAGATTTTATGAATGAAGTAGCTAGCATTGGAAGGATTCATCATGTCAATGTGGTTGGACTCGTGGGATATTGTGTGTTGAGGGAACTAAAGCGTGCTCTTGTATACGACTTCATGCCCAAATGGATCACTCGACAAGTATATTAGCATCAGTGAAGAAGGAAGTCCTCTGTTAAGTTGGCAGAGGAAGTATGACATTATTCTTGGAGTGGCTCGAGGAACTGGATATTTGCATCGAGGCTGTGATGTACAAATTTTGCATTTTGACATCAAACCACACAACATTCTTTTGGATGAGAATTTCATTCCAAAGATTTCTGACTTTGGGCTTGCAAAATTATATCCACCAGGTAATAGCATAGTGACTCTCACAGCTGCTCGAGGAACGATTGGCTATGTAGCTCCAGAGTTGATCAGCAGAAGCATCGGGGAAATCTCTTACAAAGCTGATGTTTACAGCTTTGGAATGCTGCTCATGGAAATGCTCGACTTGAAAAGACCTGAAGTTGCAAATGAAGAGAATTCCAGCCAATATTTTCCTTATTATATTTACGATAAGTTCAACAAGGGGAAGGAGATTGTGGTGGATGAAGAAGCAAATGATGATGAAAAGAAGATGGCTAGAAAGCTCGCTTTAGTTGCGTTATGGTGCATACAAACAAATCCGATACAACGCCCTTCGATGAGT</genome_strand>
        <mrna_strand>TGACCAGAGGGTACAAAGAAAAATTAGGTGAGGGAGGTTACGGCAGTGTATACAAAGGAAAGCTTCGAAGTGGAAGGGATGTAGCAGTGAAGATGCTGAACAAGCCTAAAGCTGGTGGTCAAGACTTCATGAATGAAGTAGCTACCATTGGAAGGATCCATCATGTCAATGTGGTTGGACTCGTTGGATA-T-TGTGTTGAGGGAAC-AAAGTGTGCTCTTGTATACGATTTCATGCCC-AATGGATCACTTGACAAGTATATCAGCACCAGTCAAGAAGGAAGTCCTCTGTTAAGTTGGCAGAGGAAGTATGACATTATTCTTGGAGTGGCTCGAGGAATTGGGTATTTGCATCGAGGCTGTGATGTACGGATTTTGCATTTTGACATCAAGCCACACAACATTCTTTTGGATGAGAATTTCATTCCAAAGATTTCTGACTTTGGGCTTGCAAAATTATATACAACAGATAATAGCATTGTGAATCTCACAGCTGCTCGTGGAACGATTGGCTATGTAGCTCCAGAATTGATCAGCAGAAGCATTGGAGCAATCTCTTACAAAGCTGATGTTTACAGCTTTGGAATGCTGCTAATGGAAATGCTGGACTTGAATAGACATGAAGTTGCAAATGAAGAGAATTCCAGCCAATATTTTCCTTATTATATTTACGATAAGTTCAACAAGGGGAAGGAGATCCTGGTGGATGAAGAAGCGAATGATGATGAAAAGAA-ATGGCTAGAAAGCTGAGTTTAGTTGCATTATGGTGCATTCAAACGAATCCAATACAACGCCCTTCAATGAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0108P14-gayoB/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E578941" ref_strand="+" ref_description="SGN-E578941 [86064]">
      <seq>tgaagatgttgagcaagcctaaagccggtgggcaagatttcatgaatgaagtagctaccatcggaaggattcatcatgtcaacgtggttggactcgtggggtattgtgttgagggaacaaagcgtgctcttgtatacgacttcatgcccaatggatcacttgataagtacatcagtaccagtcaagaagtaagtcctctgttaagttggcagaggaagtatgacattattcttggagtggctcgaggaatcgggtatttgcatcgaggctgtgatgtacgaattttgcattttgacatcaaaccacacaacattcttttggatgagaatttcattccaaagatttctgactttgggcttgcgaaattatatccaacagataagagcattgtgactctcacagctgctcgtggaacaattgggtatgttgctccagagttgatcagcagaagcattggagcaatctcgtacaaagctgatgtttacagcttcggaatgctgctaatggaaatgttggacttgaagagaaatgaagttgcaaatgaagagaattccagccaatactttccttattatatttacgataagttcaacaaggggaaagagattgtggtggatgaaggagcgaacgatgatgaaaagaagattgctaggaagctgagtttgatttgcttatggtgtatacaaacaaatccgatacaaagcccttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0108P14-gayoB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0108P14.2" temp_strand="-" temp_description="C02SLm0108P14.2  AC215490.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0108P14 sequenced_by:kribb upload_account_name:korea">
        <position start="14209" stop="12897"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13909" g_stop="13197" g_length="713"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="709" r_length="709" r_score="0.914"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0108P14.2" gen_strand="-" ref_id="SGN-E578941" ref_strand="+">
        <total_alignment_score>0.914</total_alignment_score>
        <cumulative_length_of_scored_exons>713</cumulative_length_of_scored_exons>
        <coverage percentage="1.006" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0108P14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E578941" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13909" e_stop="13197"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAGATGTTAAGCAAGCCTAAATCTGGTGGGCAAGATTTTATGAATGAAGTAGCTAGCATTGGAAGGATTCATCATGTCAATGTGGTTGGACTCGTGGGATATTGTGTGTTGAGGGAACTAAAGCGTGCTCTTGTATACGACTTCATGCCCAAATGGATCACTCGACAAGTATATTAGCATCAGTGAAGAAGGAAGTCCTCTGTTAAGTTGGCAGAGGAAGTATGACATTATTCTTGGAGTGGCTCGAGGAACTGGATATTTGCATCGAGGCTGTGATGTACAAATTTTGCATTTTGACATCAAACCACACAACATTCTTTTGGATGAGAATTTCATTCCAAAGATTTCTGACTTTGGGCTTGCAAAATTATATCCACCAGGTAATAGCATAGTGACTCTCACAGCTGCTCGAGGAACGATTGGCTATGTAGCTCCAGAGTTGATCAGCAGAAGCATCGGGGAAATCTCTTACAAAGCTGATGTTTACAGCTTTGGAATGCTGCTCATGGAAATGCTCGACTTGAAAAGACCTGAAGTTGCAAATGAAGAGAATTCCAGCCAATATTTTCCTTATTATATTTACGATAAGTTCAACAAGGGGAAGGAGATTGTGGTGGATGAAGAAGCAAATGATGATGAAAAGAAGATGGCTAGAAAGCTCGCTTTAGTTGCGTTATGGTGCATACAAACAAATCCGATACAACGCCCTTC</genome_strand>
        <mrna_strand>TGAAGATGTTGAGCAAGCCTAAAGCCGGTGGGCAAGATTTCATGAATGAAGTAGCTACCATCGGAAGGATTCATCATGTCAACGTGGTTGGACTCGTGGGGTA-T-TGTGTTGAGGGAAC-AAAGCGTGCTCTTGTATACGACTTCATGCCC-AATGGATCACTTGATAAGTACATCAGTACCAGTCAAGAAGTAAGTCCTCTGTTAAGTTGGCAGAGGAAGTATGACATTATTCTTGGAGTGGCTCGAGGAATCGGGTATTTGCATCGAGGCTGTGATGTACGAATTTTGCATTTTGACATCAAACCACACAACATTCTTTTGGATGAGAATTTCATTCCAAAGATTTCTGACTTTGGGCTTGCGAAATTATATCCAACAGATAAGAGCATTGTGACTCTCACAGCTGCTCGTGGAACAATTGGGTATGTTGCTCCAGAGTTGATCAGCAGAAGCATTGGAGCAATCTCGTACAAAGCTGATGTTTACAGCTTCGGAATGCTGCTAATGGAAATGTTGGACTTGAAGAGAAATGAAGTTGCAAATGAAGAGAATTCCAGCCAATACTTTCCTTATTATATTTACGATAAGTTCAACAAGGGGAAAGAGATTGTGGTGGATGAAGGAGCGAACGATGATGAAAAGAAGATTGCTAGGAAGCTGAGTTTGATTTGCTTATGGTGTATACAAACAAATCCGATACAAAGCCCTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0108P14-gayoB/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E405636" ref_strand="+" ref_description="SGN-E405636 [PPI-1-K15]">
      <seq>ggaactgtgtacaaaggaaagcttcaaagtagaagggatgtagcagtgaagatgttgagcaagcctaaagccggtgggcaagatttcatgaatgaagtagctaccatcggaaggattcatcatgtcaacgtggttggactcgtggggtattgcgttgagggaacaaagtgtgctcttgtatacgacttcatgcccaatggatcacttgataagtacatcagcactgatcaagaaggaagtcctctgttaagttggcaaaggaagtatgacattattcttggagtggctcgaggaatcgggtatttgcatcgaggctgtgatgtacgaattttgcattttgacatcaagccacacaacattcttttggatgagaattttattccaaagatttctgactttgggcttgcgaaattatatccaacagataagagcattgtcactctcacagctgctcgtggaacgattggatatgttgctccagaactgatcagcagaagcattggagcaatctcgtacaaagctgatgtttacagcttcggaatgctgctaatggaaatgttggacttgaagagaaatgaagttgcaaatgaagagaattccagccaatactttccttataatatttacgataagttcaacaaggggaaagagattgtggtggatgaagaagcgaatgatgatgaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0108P14-gayoB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0108P14.2" temp_strand="-" temp_description="C02SLm0108P14.2  AC215490.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0108P14 sequenced_by:kribb upload_account_name:korea">
        <position start="14255" stop="12967"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13955" g_stop="13267" g_length="689"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="685" r_length="685" r_score="0.911"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0108P14.2" gen_strand="-" ref_id="SGN-E405636" ref_strand="+">
        <total_alignment_score>0.911</total_alignment_score>
        <cumulative_length_of_scored_exons>689</cumulative_length_of_scored_exons>
        <coverage percentage="1.006" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0108P14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E405636" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13955" e_stop="13267"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCAGTGTATACAAAGGAAAGCTTCAAAGTGGAAGGGATGTGGCAGTGAAGATGTTAAGCAAGCCTAAATCTGGTGGGCAAGATTTTATGAATGAAGTAGCTAGCATTGGAAGGATTCATCATGTCAATGTGGTTGGACTCGTGGGATATTGTGTGTTGAGGGAACTAAAGCGTGCTCTTGTATACGACTTCATGCCCAAATGGATCACTCGACAAGTATATTAGCATCAGTGAAGAAGGAAGTCCTCTGTTAAGTTGGCAGAGGAAGTATGACATTATTCTTGGAGTGGCTCGAGGAACTGGATATTTGCATCGAGGCTGTGATGTACAAATTTTGCATTTTGACATCAAACCACACAACATTCTTTTGGATGAGAATTTCATTCCAAAGATTTCTGACTTTGGGCTTGCAAAATTATATCCACCAGGTAATAGCATAGTGACTCTCACAGCTGCTCGAGGAACGATTGGCTATGTAGCTCCAGAGTTGATCAGCAGAAGCATCGGGGAAATCTCTTACAAAGCTGATGTTTACAGCTTTGGAATGCTGCTCATGGAAATGCTCGACTTGAAAAGACCTGAAGTTGCAAATGAAGAGAATTCCAGCCAATATTTTCCTTATTATATTTACGATAAGTTCAACAAGGGGAAGGAGATTGTGGTGGATGAAGAAGCAAATGATGATGAAA</genome_strand>
        <mrna_strand>GGAACTGTGTACAAAGGAAAGCTTCAAAGTAGAAGGGATGTAGCAGTGAAGATGTTGAGCAAGCCTAAAGCCGGTGGGCAAGATTTCATGAATGAAGTAGCTACCATCGGAAGGATTCATCATGTCAACGTGGTTGGACTCGTGGGGTA-T-TGCGTTGAGGGAAC-AAAGTGTGCTCTTGTATACGACTTCATGCCC-AATGGATCACTTGATAAGTACATCAGCACTGATCAAGAAGGAAGTCCTCTGTTAAGTTGGCAAAGGAAGTATGACATTATTCTTGGAGTGGCTCGAGGAATCGGGTATTTGCATCGAGGCTGTGATGTACGAATTTTGCATTTTGACATCAAGCCACACAACATTCTTTTGGATGAGAATTTTATTCCAAAGATTTCTGACTTTGGGCTTGCGAAATTATATCCAACAGATAAGAGCATTGTCACTCTCACAGCTGCTCGTGGAACGATTGGATATGTTGCTCCAGAACTGATCAGCAGAAGCATTGGAGCAATCTCGTACAAAGCTGATGTTTACAGCTTCGGAATGCTGCTAATGGAAATGTTGGACTTGAAGAGAAATGAAGTTGCAAATGAAGAGAATTCCAGCCAATACTTTCCTTATAATATTTACGATAAGTTCAACAAGGGGAAAGAGATTGTGGTGGATGAAGAAGCGAATGATGATGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0108P14-gayoB/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E404946" ref_strand="+" ref_description="SGN-E404946 [PPC-15-L14]">
      <seq>tgaccagagggtacaaagaaaaattaagtgagggaggttacggcagtgtatacaaaggaaagcttcgaagtggaagggatgtagcagtgaagatgctgaacaagcctaaagctggtggtcaagacttcatgaatgaagtagctaccattggaaggatccatcatgtcaatgtggttggactcgttggatattgtgttgagggaacaaagtgtgctcttgtatacgatttcatgcccaatggatcacttgacaagtatatcagcaccagtcaagaaggaagtcctctgttaagttggcagaggaagtatgacattattcttggagtggctcgaggaattgggtatttgcatcgaggctgtgatgtacggattttgcattttgacatcaagccacacaacattcttttggatgagaatttcattccaaagatttctgactttgggcttgcaaaattatatacaacagataatagcattgtgaatctcacagctgctcgtggaacgattggctatgtagctccagaattgatcagcagaagcattggagcaatctcttacaaagctgatgtttacagctttgggatgctgcctatggaaatgctggacttgaatagacatgaaagtgcaaatgaagaagattcccagcaatactttccttattatatttacgataaagttcac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0108P14-gayoB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0108P14.2" temp_strand="-" temp_description="C02SLm0108P14.2  AC215490.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0108P14 sequenced_by:kribb upload_account_name:korea">
        <position start="14296" stop="13015"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13996" g_stop="13314" g_length="683"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="680" r_length="680" r_score="0.912"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0108P14.2" gen_strand="-" ref_id="SGN-E404946" ref_strand="+">
        <total_alignment_score>0.912</total_alignment_score>
        <cumulative_length_of_scored_exons>683</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0108P14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E404946" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13996" e_stop="13314"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGACAAGAGGATTCAAAGAGAAATTAGGTGAGGGAGGTTATGGCAGTGTATACAAAGGAAAGCTTCAAAGTGGAAGGGATGTGGCAGTGAAGATGTTAAGCAAGCCTAAATCTGGTGGGCAAGATTTTATGAATGAAGTAGCTAGCATTGGAAGGATTCATCATGTCAATGTGGTTGGACTCGTGGGATATTGTGTGTTGAGGGAACTAAAGCGTGCTCTTGTATACGACTTCATGCCCAAATGGATCACTCGACAAGTATATTAGCATCAGTGAAGAAGGAAGTCCTCTGTTAAGTTGGCAGAGGAAGTATGACATTATTCTTGGAGTGGCTCGAGGAACTGGATATTTGCATCGAGGCTGTGATGTACAAATTTTGCATTTTGACATCAAACCACACAACATTCTTTTGGATGAGAATTTCATTCCAAAGATTTCTGACTTTGGGCTTGCAAAATTATATCCACCAGGTAATAGCATAGTGACTCTCACAGCTGCTCGAGGAACGATTGGCTATGTAGCTCCAGAGTTGATCAGCAGAAGCATCGGGGAAATCTCTTACAAAGCTGATGTTTACAGCTTTGGAATGCTGCTCATGGAAATGCTCGACTTGAAAAGACCTGAAGTTGCAAATGAAGAGAATTCCAGCCAATATTTTCCTTATTATATTTACGAT-AAGTTCAA</genome_strand>
        <mrna_strand>TGACCAGAGGGTACAAAGAAAAATTAAGTGAGGGAGGTTACGGCAGTGTATACAAAGGAAAGCTTCGAAGTGGAAGGGATGTAGCAGTGAAGATGCTGAACAAGCCTAAAGCTGGTGGTCAAGACTTCATGAATGAAGTAGCTACCATTGGAAGGATCCATCATGTCAATGTGGTTGGACTCGTTGGATA-T-TGTGTTGAGGGAAC-AAAGTGTGCTCTTGTATACGATTTCATGCCC-AATGGATCACTTGACAAGTATATCAGCACCAGTCAAGAAGGAAGTCCTCTGTTAAGTTGGCAGAGGAAGTATGACATTATTCTTGGAGTGGCTCGAGGAATTGGGTATTTGCATCGAGGCTGTGATGTACGGATTTTGCATTTTGACATCAAGCCACACAACATTCTTTTGGATGAGAATTTCATTCCAAAGATTTCTGACTTTGGGCTTGCAAAATTATATACAACAGATAATAGCATTGTGAATCTCACAGCTGCTCGTGGAACGATTGGCTATGTAGCTCCAGAATTGATCAGCAGAAGCATTGGAGCAATCTCTTACAAAGCTGATGTTTACAGCTTTGGGATGCTGCCTATGGAAATGCTGGACTTGAATAGACATGAAAGTGCAAATGAAGAAGATTCCCAGCAATACTTTCCTTATTATATTTACGATAAAGTTCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0108P14-gayoB/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E407312" ref_strand="+" ref_description="SGN-E407312 [PPI-6-N23]">
      <seq>ttttcgtgttgcatttgggagcaaaatttgtaataggccttccgctggtaattgcatttctggtgtacaaattcaaaaggaggcatttgtcaatgtacgatacgattgaaggctttttgcaaacacaaaacaatttcatgccaatcagatacaattactccaacataaagagaatgacaagaggattcaaagagaaattaggcgaggggggttacggaactgtgtacaaaggaaagcttcaaagtagaagggatgtagcagtgaagatgttgagcaagcctaaagccggtgggcaagatttcatgaatgaagtagctaccatcggaaggattcatcatgtcaacgtggttggactcgtggggtattgcgttgagggaacaaagcgtgctcttgtttacgacttcatgcccaatggatcacttgataagtacatccgtaccagtcaagaaggaagtcctctgttaagttggcagaggaagtatgacattattcttggagtggctcgaggaattgggtatttgcatcgaggctgtgatgtacgaattttgcattttgacatcaaaccacacaacattcttttggatgagaatttcattccaaagatttctgactttgggcttgcgaaattatatccaacagataaaagcattgtgactctcacagctgctcgtggaacgattggatatgttgctccagagttgatcagcagaagcattggagcaatctcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0108P14-gayoB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0108P14.2" temp_strand="-" temp_description="C02SLm0108P14.2  AC215490.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0108P14 sequenced_by:kribb upload_account_name:korea">
        <position start="14460" stop="13140"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14161" g_stop="13439" g_length="723"/>
          <reference_exon_boundary r_type="cDNA" r_start="10" r_stop="728" r_length="719" r_score="0.910"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0108P14.2" gen_strand="-" ref_id="SGN-E407312" ref_strand="+">
        <total_alignment_score>0.910</total_alignment_score>
        <cumulative_length_of_scored_exons>723</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0108P14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E407312" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14161" e_stop="13439"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGTATTTTGGAATAAAATTTGTGATAGGCCTTCCGTTTGTAGTTGTATTTCTGGTGATCAAATTCAAAAGGAGGCATTTGTCGATGTATGATACGATTGAAGGGTTTTTACAATCACAAAATAATTTCATGCCAATCAGATATAATTACTCCCACATAAAGAGAATGACAAGAGGATTCAAAGAGAAATTAGGTGAGGGAGGTTATGGCAGTGTATACAAAGGAAAGCTTCAAAGTGGAAGGGATGTGGCAGTGAAGATGTTAAGCAAGCCTAAATCTGGTGGGCAAGATTTTATGAATGAAGTAGCTAGCATTGGAAGGATTCATCATGTCAATGTGGTTGGACTCGTGGGATATTGTGTGTTGAGGGAACTAAAGCGTGCTCTTGTATACGACTTCATGCCCAAATGGATCACTCGACAAGTATATTAGCATCAGTGAAGAAGGAAGTCCTCTGTTAAGTTGGCAGAGGAAGTATGACATTATTCTTGGAGTGGCTCGAGGAACTGGATATTTGCATCGAGGCTGTGATGTACAAATTTTGCATTTTGACATCAAACCACACAACATTCTTTTGGATGAGAATTTCATTCCAAAGATTTCTGACTTTGGGCTTGCAAAATTATATCCACCAGGTAATAGCATAGTGACTCTCACAGCTGCTCGAGGAACGATTGGCTATGTAGCTCCAGAGTTGATCAGCAGAAGCATCGGGGAAATCTCT</genome_strand>
        <mrna_strand>TGCATTTGGGAGCAAAATTTGTAATAGGCCTTCCGCTGGTAATTGCATTTCTGGTGTACAAATTCAAAAGGAGGCATTTGTCAATGTACGATACGATTGAAGGCTTTTTGCAAACACAAAACAATTTCATGCCAATCAGATACAATTACTCCAACATAAAGAGAATGACAAGAGGATTCAAAGAGAAATTAGGCGAGGGGGGTTACGGAACTGTGTACAAAGGAAAGCTTCAAAGTAGAAGGGATGTAGCAGTGAAGATGTTGAGCAAGCCTAAAGCCGGTGGGCAAGATTTCATGAATGAAGTAGCTACCATCGGAAGGATTCATCATGTCAACGTGGTTGGACTCGTGGGGTA-T-TGCGTTGAGGGAAC-AAAGCGTGCTCTTGTTTACGACTTCATGCCC-AATGGATCACTTGATAAGTACATCCGTACCAGTCAAGAAGGAAGTCCTCTGTTAAGTTGGCAGAGGAAGTATGACATTATTCTTGGAGTGGCTCGAGGAATTGGGTATTTGCATCGAGGCTGTGATGTACGAATTTTGCATTTTGACATCAAACCACACAACATTCTTTTGGATGAGAATTTCATTCCAAAGATTTCTGACTTTGGGCTTGCGAAATTATATCCAACAGATAAAAGCATTGTGACTCTCACAGCTGCTCGTGGAACGATTGGATATGTTGCTCCAGAGTTGATCAGCAGAAGCATTGGAGCAATCTCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0108P14-gayoB/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E245054" ref_strand="+" ref_description="SGN-E245054 [cLEF-13-K20]">
      <seq>ggattcaaagagaaattaggcgagggaggttacggaactgtgtacaaaggaaagcttcaaagtggaaggtatgtagctgtgaagatgttgagcaagcctaaagctgatgggcaagatttcatgaatgaagtagctaccatcggaaggattcatcatgtcaacgtggttggactcgcagggtattgcgttgagggaacaaagcgtgctcttgtatacgacttcatgtccaatggatcacttgataagtacatcaggactgatcaagaaggaagtcctctgttaagttggcagaagaagtatgacattattcttggagtggctcgaggaatcgggtatttgcatcgaggctgtgatgtacgaatattgcattttgacatcaaaccacacaacattctcttggatgagaatttcattccaaagatttctgactttgggcttgcgaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0108P14-gayoB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0108P14.2" temp_strand="-" temp_description="C02SLm0108P14.2  AC215490.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0108P14 sequenced_by:kribb upload_account_name:korea">
        <position start="14288" stop="13241"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13988" g_stop="13540" g_length="449"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="445" r_length="445" r_score="0.904"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0108P14.2" gen_strand="-" ref_id="SGN-E245054" ref_strand="+">
        <total_alignment_score>0.904</total_alignment_score>
        <cumulative_length_of_scored_exons>449</cumulative_length_of_scored_exons>
        <coverage percentage="1.009" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0108P14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E245054" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13988" e_stop="13540"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGATTCAAAGAGAAATTAGGTGAGGGAGGTTATGGCAGTGTATACAAAGGAAAGCTTCAAAGTGGAAGGGATGTGGCAGTGAAGATGTTAAGCAAGCCTAAATCTGGTGGGCAAGATTTTATGAATGAAGTAGCTAGCATTGGAAGGATTCATCATGTCAATGTGGTTGGACTCGTGGGATATTGTGTGTTGAGGGAACTAAAGCGTGCTCTTGTATACGACTTCATGCCCAAATGGATCACTCGACAAGTATATTAGCATCAGTGAAGAAGGAAGTCCTCTGTTAAGTTGGCAGAGGAAGTATGACATTATTCTTGGAGTGGCTCGAGGAACTGGATATTTGCATCGAGGCTGTGATGTACAAATTTTGCATTTTGACATCAAACCACACAACATTCTTTTGGATGAGAATTTCATTCCAAAGATTTCTGACTTTGGGCTTGCAAAAT</genome_strand>
        <mrna_strand>GGATTCAAAGAGAAATTAGGCGAGGGAGGTTACGGAACTGTGTACAAAGGAAAGCTTCAAAGTGGAAGGTATGTAGCTGTGAAGATGTTGAGCAAGCCTAAAGCTGATGGGCAAGATTTCATGAATGAAGTAGCTACCATCGGAAGGATTCATCATGTCAACGTGGTTGGACTCGCAGGGTA-T-TGCGTTGAGGGAAC-AAAGCGTGCTCTTGTATACGACTTCATGTCC-AATGGATCACTTGATAAGTACATCAGGACTGATCAAGAAGGAAGTCCTCTGTTAAGTTGGCAGAAGAAGTATGACATTATTCTTGGAGTGGCTCGAGGAATCGGGTATTTGCATCGAGGCTGTGATGTACGAATATTGCATTTTGACATCAAACCACACAACATTCTCTTGGATGAGAATTTCATTCCAAAGATTTCTGACTTTGGGCTTGCGAAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0108P14-gayoB/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E560302" ref_strand="+" ref_description="SGN-E560302 [19934]">
      <seq>tgttttcgtgtgtaagctcctatataatccttttagcaatctatatgtgttttatcatctgtatgtttcgttataacttctcaaacgtgcagagtattcgatagcaaaatttgtaataggctttccgttggtaattgcatttttggtgtacaaattcaaaaggaggcatatgtcaatgtacgaaacgattgaaggctttttgcaaacacaaaacaatttcatgccaatcagatataattactccaacataaagagaatgacaggaggattcaaagagaaattaggcgaggggggttacggaactgtgtacaaaggaaagcttcaaagttgaagggatgtagcagtgaagatgttgagcaagcctaaagccggtgggcaagatttcatgaatgaagtagctaccattggaaggattcatcatgtcaacgtggttggactcgtggggtattgcgttgagggaacaaagcgtgctcttgtatacgacttcatgcccaatggatcacttgataagtacatcagtaccagtcaagaaggaagtcctctgttaagttggcagaggaagtatgacattattctaggagtggctcgaggaatcgggtattagcatcgaggctgtgatgtacgaattttgcattttgacatcaaaccacacaacattcttttggatgagaatttcattccaagatttctgactttgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0108P14-gayoB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0108P14.2" temp_strand="-" temp_description="C02SLm0108P14.2  AC215490.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0108P14 sequenced_by:kribb upload_account_name:korea">
        <position start="14448" stop="13251"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14184" g_stop="13551" g_length="634"/>
          <reference_exon_boundary r_type="cDNA" r_start="70" r_stop="698" r_length="629" r_score="0.901"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0108P14.2" gen_strand="-" ref_id="SGN-E560302" ref_strand="+">
        <total_alignment_score>0.901</total_alignment_score>
        <cumulative_length_of_scored_exons>634</cumulative_length_of_scored_exons>
        <coverage percentage="0.908" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0108P14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E560302" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14184" e_stop="13551"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTATGGCTTCTCAAACTTGCAGCGTATTTTGGAATAAAATTTGTGATAGGCCTTCCGTTTGTAGTTGTATTTCTGGTGATCAAATTCAAAAGGAGGCATTTGTCGATGTATGATACGATTGAAGGGTTTTTACAATCACAAAATAATTTCATGCCAATCAGATATAATTACTCCCACATAAAGAGAATGACAAGAGGATTCAAAGAGAAATTAGGTGAGGGAGGTTATGGCAGTGTATACAAAGGAAAGCTTCAAAGTGGAAGGGATGTGGCAGTGAAGATGTTAAGCAAGCCTAAATCTGGTGGGCAAGATTTTATGAATGAAGTAGCTAGCATTGGAAGGATTCATCATGTCAATGTGGTTGGACTCGTGGGATATTGTGTGTTGAGGGAACTAAAGCGTGCTCTTGTATACGACTTCATGCCCAAATGGATCACTCGACAAGTATATTAGCATCAGTGAAGAAGGAAGTCCTCTGTTAAGTTGGCAGAGGAAGTATGACATTATTCTTGGAGTGGCTCGAGGAACTGGATATTTGCATCGAGGCTGTGATGTACAAATTTTGCATTTTGACATCAAACCACACAACATTCTTTTGGATGAGAATTTCATTCCAAAGATTTCTGACTTTGG</genome_strand>
        <mrna_strand>GTTATAACTTCTCAAACGTGCAGAGTATTCGATAGCAAAATTTGTAATAGGCTTTCCGTTGGTAATTGCATTTTTGGTGTACAAATTCAAAAGGAGGCATATGTCAATGTACGAAACGATTGAAGGCTTTTTGCAAACACAAAACAATTTCATGCCAATCAGATATAATTACTCCAACATAAAGAGAATGACAGGAGGATTCAAAGAGAAATTAGGCGAGGGGGGTTACGGAACTGTGTACAAAGGAAAGCTTCAAAGTTGAAGGGATGTAGCAGTGAAGATGTTGAGCAAGCCTAAAGCCGGTGGGCAAGATTTCATGAATGAAGTAGCTACCATTGGAAGGATTCATCATGTCAACGTGGTTGGACTCGTGGGGTA-T-TGCGTTGAGGGAAC-AAAGCGTGCTCTTGTATACGACTTCATGCCC-AATGGATCACTTGATAAGTACATCAGTACCAGTCAAGAAGGAAGTCCTCTGTTAAGTTGGCAGAGGAAGTATGACATTATTCTAGGAGTGGCTCGAGGAATCGGGTATTAGCATCGAGGCTGTGATGTACGAATTTTGCATTTTGACATCAAACCACACAACATTCTTTTGGATGAGAATTTCATTCC-AAGATTTCTGACTTTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0108P14-gayoB/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E396806" ref_strand="+" ref_description="SGN-E396806 [TUS-43-N18](-)">
      <seq>tttttttgttaagtccgatgttttcagctttggggttttggtgttagaaatagtaaccggaaagaagaacaggggattttattatcaaaataaccaattcaaccttcttggacatgcgtggagattttggaaagaagggagcggttcagagctactagatccattttttggagaatttttttttccatttgaagtaatgagatgcatacaggttggactgttgtgtgtccaggaacaagcagaagaccgaccaaacatggcccctgtggttttgatgttaggtagggaaagtgcatcacttcctcagcctaaaaacccaggattttgccttggaagaagacccgttgattttgattcatatttgactaattatgaagaaacttgcactgtcaatcaagttacagttaccatgatagatccccggtagttgatggtttcgccctcagaaagtgtgtatattattacaagaggttcccaatttttttttgtatactatttcagtttttgtttttgggtaagttttgtgaaagataaagggcataattaggtttttttttttcattacatacaatttgggaattcaaaattttgttttttttcatcatcaatgtaataggccaatcattccttttccatatcctttttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0108P14-gayoB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0108P14.2" temp_strand="-" temp_description="C02SLm0108P14.2  AC215490.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0108P14 sequenced_by:kribb upload_account_name:korea">
        <position start="18407" stop="11439"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18108" g_stop="17994" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="115" r_length="115" r_score="0.957"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="17993" i_stop="17904" i_length="90">
            <donor d_prob="0.961" d_score="0.96"/>
            <acceptor a_prob="0.908" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="17903" g_stop="17373" g_length="531"/>
          <reference_exon_boundary r_type="cDNA" r_start="116" r_stop="646" r_length="531" r_score="0.951"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="17372" i_stop="16872" i_length="501">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="16871" g_stop="16855" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="647" r_stop="663" r_length="17" r_score="0.765"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="16854" i_stop="16680" i_length="175">
            <donor d_prob="0.468" d_score="0.00"/>
            <acceptor a_prob="0.921" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="16679" g_stop="16662" g_length="18"/>
          <reference_exon_boundary r_type="cDNA" r_start="664" r_stop="681" r_length="18" r_score="0.778"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0108P14.2" gen_strand="-" ref_id="SGN-E396806" ref_strand="+">
        <total_alignment_score>0.952</total_alignment_score>
        <cumulative_length_of_scored_exons>681</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0108P14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E396806" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18108" e_stop="17994"/>
          <exon e_start="17903" e_stop="17373"/>
          <exon e_start="16871" e_stop="16855"/>
          <exon e_start="16679" e_stop="16662"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCTCTGTTAAGTCCGATGTTTTCAGCTTTGGGGTTTTGGTGTTAGAAATAGTAACCGGAAAGAAGAACAGGGGATTCTATTATCAAAATAACCAACTCAACCTTCTTGGACATGTAAGTTCACAGATCATGTGTTAGCTTCATTATTGGCAACACATTCATCATTTGATTAATTTCTGATAAAGAAAGTAATCGACTATGCAGGCGTGGAGACTCTGGAAAGAAGGGAGCGGCTCAGAGCTACTAGATCCATCTTTTGGAGAATCTTTTTCTCCATCTGAAGTAATGAGATGCATACAGGTTGGACTGTTGTGTGTCCAGGAACAAGCAGAAGACCGACCAAACATGGCCACTGTGGTTTTGATGCTAGGTAGCGAAAGTGCATCACTTCCTCAGCCTAAAAACCCAGGATTTTGCCTTGGAAGAAGACCCGTTGATTCTGATTCATATTCGACTAATTATGAAGAAACTTGCACTGTCAATCAAGTTACAGTTACCATGATAGATCCCCGGTAGTTGATGGTATCGCCCTCAGAAAGTGTGTATATTACTACAAGAGGTTCACAATTTTCTCTTGTATACTATCTCAGTTTTTGTTTTTGGGTAAGTTTTGTGAAAGATAAAGAGCATAATTAGGTCTTTTTTTCTCATTACATACAATTTGTGAATTCAAAATCTTGTCTTTTTTCATCATCAATGTAATAGGCCAATCATTCCTTTTCCATATCCTTCTAAATTACTGTGTCATTATTGATGTGATTCAGAAGGAATATCTTGTGCATTCATCTTCATTTCTACTAAATAAAATTTAAACTTTTGGTCTTTTCATTTCCTCGTATTGAATATGTTGTGCGGAATTTGAGATAATACGAGAAAATATAAACACAAAAACAAGACAACAGTTTACGTGGTTCACCAATAAATTGGCTACGTCCACGGGAAGAGAGGGAGCAGTTTTATTATGGAGAGGCAAAAACAGAATTACAGAATAGGGTTTCCCATAGCGTCTATATATAGTGCTAAGCTACGCCCTAACAGGCTTGGGCCCAACATACAGAATCAACAGAAAATTAAGGGCCCAATACAACAACATTGTATACCGTCGGGCCGGGGGCGTCTCCGCCCCCCCGGACCCCAGGCCAGGGGGCGCGTCGCCCCCCTGGACCCCCCGACTCGCTGACCGGGCAGCGAGACCCCCGTCCTTTCTGTTTGTAGCGGGTCCGATTCAAGGCATTCAACAGAATAAAGAAAAAGTTGGTCTTACAAATAATGAATTAATACATTGGATAAGATAAATCATAAGAACTGTAGTGTTCAATTGTTCATATCAAAGTCACTTCTTTTATTGATTCCTTCTTAATCTATTATGTATTACCACATTGAATTGTATTTATGTTTCGTAATTTTTTTTCCTCTCAATTTTTTTAGTAACAAAATAAAAGAAAA</genome_strand>
        <mrna_strand>TTTTTTTGTTAAGTCCGATGTTTTCAGCTTTGGGGTTTTGGTGTTAGAAATAGTAACCGGAAAGAAGAACAGGGGATTTTATTATCAAAATAACCAATTCAACCTTCTTGGACAT..........................................................................................GCGTGGAGATTTTGGAAAGAAGGGAGCGGTTCAGAGCTACTAGATCCATTTTTTGGAGAATTTTTTTTTCCATTTGAAGTAATGAGATGCATACAGGTTGGACTGTTGTGTGTCCAGGAACAAGCAGAAGACCGACCAAACATGGCCCCTGTGGTTTTGATGTTAGGTAGGGAAAGTGCATCACTTCCTCAGCCTAAAAACCCAGGATTTTGCCTTGGAAGAAGACCCGTTGATTTTGATTCATATTTGACTAATTATGAAGAAACTTGCACTGTCAATCAAGTTACAGTTACCATGATAGATCCCCGGTAGTTGATGGTTTCGCCCTCAGAAAGTGTGTATATTATTACAAGAGGTTCCCAATTTTTTTTTGTATACTATTTCAGTTTTTGTTTTTGGGTAAGTTTTGTGAAAGATAAAGGGCATAATTAGGTTTTTTTTTTTCATTACATACAATTTGGGAATTCAAAATTTTGTTTTTTTTCATCATCAATGTAATAGGCCAATCATTCCTTTTCCATATCCTTTTTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAA...............................................................................................................................................................................AAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0108P14-gayoB/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E353554" ref_strand="+" ref_description="SGN-E353554 [cTOS-15-H1]">
      <seq>aagaggttcacaattttctcttgtatactatctcagtttttgtttttgggtaagttttgtgaaagataaagagcataattaggtctttttttctcattacatacaatttgtgaattcaaaatcttgtcttttttcatcatcaatgtaataggccaatcattccttttccatatccttctaaattactgtgtcattattgatgtgattcagaaggaatatcttgtgcattcatcttcatttctactaaataaaatttaaacttttggtcttttcaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0108P14-gayoB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0108P14.2" temp_strand="-" temp_description="C02SLm0108P14.2  AC215490.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0108P14 sequenced_by:kribb upload_account_name:korea">
        <position start="17853" stop="16980"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17553" g_stop="17281" g_length="273"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="273" r_length="273" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0108P14.2" gen_strand="-" ref_id="SGN-E353554" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>273</cumulative_length_of_scored_exons>
        <coverage percentage="0.975" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0108P14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E353554" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17553" e_stop="17281"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAGGTTCACAATTTTCTCTTGTATACTATCTCAGTTTTTGTTTTTGGGTAAGTTTTGTGAAAGATAAAGAGCATAATTAGGTCTTTTTTTCTCATTACATACAATTTGTGAATTCAAAATCTTGTCTTTTTTCATCATCAATGTAATAGGCCAATCATTCCTTTTCCATATCCTTCTAAATTACTGTGTCATTATTGATGTGATTCAGAAGGAATATCTTGTGCATTCATCTTCATTTCTACTAAATAAAATTTAAACTTTTGGTCTTTTC</genome_strand>
        <mrna_strand>AAGAGGTTCACAATTTTCTCTTGTATACTATCTCAGTTTTTGTTTTTGGGTAAGTTTTGTGAAAGATAAAGAGCATAATTAGGTCTTTTTTTCTCATTACATACAATTTGTGAATTCAAAATCTTGTCTTTTTTCATCATCAATGTAATAGGCCAATCATTCCTTTTCCATATCCTTCTAAATTACTGTGTCATTATTGATGTGATTCAGAAGGAATATCTTGTGCATTCATCTTCATTTCTACTAAATAAAATTTAAACTTTTGGTCTTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0108P14-gayoB/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E711751" ref_strand="+" ref_description="SGN-E711751 [FB02DE05]">
      <seq>cgttttagacccccaaaatatcagattttggcatggnaagaacctttggcggagatgagactgaaggaaataccaaaagagtagttggaacctatggttacatgtctccggaatatgcaatggatggcctcttctctgttaagtccgatgttttcagctttggggttttggtgttagaaatagtaaccggaaagaagaacaggggattctattatcaaaataaccaactcaaccttcttggacatgcgtggagactctggaaagaagggagcggctcagagctactagatccatcttttggagaatctttttctccatctgaagtaatgagatgcatacaggttggactgttgtgtgtccaggaacaagcagaagaccgaccaaacatggccactgtggttttgatgctaggtagcgaaagtgcatcacttcctcagcctaaaaacccaggattttgccttggaagaagacccgttgattctgattcatattcgactaattatgaagaaacttgcactgtcaatcaagttacagttaccatgatagatccccggtagttgatggtatcgccctcagaaagtgtgtatattactacaagaggttcacaattttctcttgtatactatctcagtttttgtttttgggtaagttttgtgaaagataaagagcataattaggtcttttttttctcattacatacaatttgtgaattcaaaatcttgtcttttttcatcatcaatgtaataggccaatcattccttttccatatccttgtaaattactgtgtcattattgatgtgaatccaaaggaatatcttgtgaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0108P14-gayoB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0108P14.2" temp_strand="-" temp_description="C02SLm0108P14.2  AC215490.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0108P14 sequenced_by:kribb upload_account_name:korea">
        <position start="18622" stop="17027"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18324" g_stop="18231" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="94" r_length="94" r_score="0.926"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18230" i_stop="18145" i_length="86">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18144" g_stop="17994" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="95" r_stop="245" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="17993" i_stop="17904" i_length="90">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.908" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="17903" g_stop="17321" g_length="583"/>
          <reference_exon_boundary r_type="cDNA" r_start="246" r_stop="829" r_length="584" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0108P14.2" gen_strand="-" ref_id="SGN-E711751" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>828</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0108P14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E711751" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18324" e_stop="18231"/>
          <exon e_start="18144" e_stop="17994"/>
          <exon e_start="17903" e_stop="17321"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGATTTGACCCCCAAAATATCAGATTTTGGCATGGCAAGAATTTTTGGCGGAGATGAGACTGAAGGAAATACCAAAAGAGTAGTTGGAACCTAGTAAGCACACGACATAATTTCTTCACATTTTTCATAGAACCTTTAAAGCTGTTTCTAAATCTGTTTTTTTTTTTGTTTTGATGTAGTGGTTACATGTCTCCGGAATATGCAATGGATGGCCTCTTCTCTGTTAAGTCCGATGTTTTCAGCTTTGGGGTTTTGGTGTTAGAAATAGTAACCGGAAAGAAGAACAGGGGATTCTATTATCAAAATAACCAACTCAACCTTCTTGGACATGTAAGTTCACAGATCATGTGTTAGCTTCATTATTGGCAACACATTCATCATTTGATTAATTTCTGATAAAGAAAGTAATCGACTATGCAGGCGTGGAGACTCTGGAAAGAAGGGAGCGGCTCAGAGCTACTAGATCCATCTTTTGGAGAATCTTTTTCTCCATCTGAAGTAATGAGATGCATACAGGTTGGACTGTTGTGTGTCCAGGAACAAGCAGAAGACCGACCAAACATGGCCACTGTGGTTTTGATGCTAGGTAGCGAAAGTGCATCACTTCCTCAGCCTAAAAACCCAGGATTTTGCCTTGGAAGAAGACCCGTTGATTCTGATTCATATTCGACTAATTATGAAGAAACTTGCACTGTCAATCAAGTTACAGTTACCATGATAGATCCCCGGTAGTTGATGGTATCGCCCTCAGAAAGTGTGTATATTACTACAAGAGGTTCACAATTTTCTCTTGTATACTATCTCAGTTTTTGTTTTTGGGTAAGTTTTGTGAAAGATAAAGAGCATAATTAGGTC-TTTTTTTCTCATTACATACAATTTGTGAATTCAAAATCTTGTCTTTTTTCATCATCAATGTAATAGGCCAATCATTCCTTTTCCATATCCTTCTAAATTACTGTGTCATTATTGATGTGATTCAGAAGGAATATCTTGTGCATTCATC</genome_strand>
        <mrna_strand>CGTTTTAGACCCCCAAAATATCAGATTTTGGCATGGNAAGAACCTTTGGCGGAGATGAGACTGAAGGAAATACCAAAAGAGTAGTTGGAACCTA......................................................................................TGGTTACATGTCTCCGGAATATGCAATGGATGGCCTCTTCTCTGTTAAGTCCGATGTTTTCAGCTTTGGGGTTTTGGTGTTAGAAATAGTAACCGGAAAGAAGAACAGGGGATTCTATTATCAAAATAACCAACTCAACCTTCTTGGACAT..........................................................................................GCGTGGAGACTCTGGAAAGAAGGGAGCGGCTCAGAGCTACTAGATCCATCTTTTGGAGAATCTTTTTCTCCATCTGAAGTAATGAGATGCATACAGGTTGGACTGTTGTGTGTCCAGGAACAAGCAGAAGACCGACCAAACATGGCCACTGTGGTTTTGATGCTAGGTAGCGAAAGTGCATCACTTCCTCAGCCTAAAAACCCAGGATTTTGCCTTGGAAGAAGACCCGTTGATTCTGATTCATATTCGACTAATTATGAAGAAACTTGCACTGTCAATCAAGTTACAGTTACCATGATAGATCCCCGGTAGTTGATGGTATCGCCCTCAGAAAGTGTGTATATTACTACAAGAGGTTCACAATTTTCTCTTGTATACTATCTCAGTTTTTGTTTTTGGGTAAGTTTTGTGAAAGATAAAGAGCATAATTAGGTCTTTTTTTTCTCATTACATACAATTTGTGAATTCAAAATCTTGTCTTTTTTCATCATCAATGTAATAGGCCAATCATTCCTTTTCCATATCCTTGTAAATTACTGTGTCATTATTGATGTGAATCCAAAGGAATATCTTGTGAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0108P14-gayoB/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E220662" ref_strand="+" ref_description="SGN-E220662 [cLEL-12-P22](-)">
      <seq>gcctaaaaacccaggattttgccttgaaaaaaaccacgttgattctgattcatattcgactaattatgaagaaacttgcactgtcaatcaagttacagttaccatgatagatccccggtagttgatggtatcgccctcagaaagtgtgtatattactacaagaggttcacaattttctcttgtatactatctcagtttttgtttttgggtaagttttgtgaaagataaagagcataattaggtctttttttctcattacatacaatttgtgaattcaaaatcttgtcttttttcatcaacaatgtcataggccaatcattccttttccaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0108P14-gayoB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0108P14.2" temp_strand="-" temp_description="C02SLm0108P14.2  AC215490.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0108P14 sequenced_by:kribb upload_account_name:korea">
        <position start="18012" stop="17082"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17712" g_stop="17385" g_length="328"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="328" r_length="328" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="329" polyA_stop="349"/>
      <MATCH_line gen_id="C02SLm0108P14.2" gen_strand="-" ref_id="SGN-E220662" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>328</cumulative_length_of_scored_exons>
        <coverage percentage="0.940" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0108P14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E220662" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17712" e_stop="17385"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCTAAAAACCCAGGATTTTGCCTTGGAAGAAGACCCGTTGATTCTGATTCATATTCGACTAATTATGAAGAAACTTGCACTGTCAATCAAGTTACAGTTACCATGATAGATCCCCGGTAGTTGATGGTATCGCCCTCAGAAAGTGTGTATATTACTACAAGAGGTTCACAATTTTCTCTTGTATACTATCTCAGTTTTTGTTTTTGGGTAAGTTTTGTGAAAGATAAAGAGCATAATTAGGTCTTTTTTTCTCATTACATACAATTTGTGAATTCAAAATCTTGTCTTTTTTCATCATCAATGTAATAGGCCAATCATTCCTTTTCC</genome_strand>
        <mrna_strand>GCCTAAAAACCCAGGATTTTGCCTTGAAAAAAACCACGTTGATTCTGATTCATATTCGACTAATTATGAAGAAACTTGCACTGTCAATCAAGTTACAGTTACCATGATAGATCCCCGGTAGTTGATGGTATCGCCCTCAGAAAGTGTGTATATTACTACAAGAGGTTCACAATTTTCTCTTGTATACTATCTCAGTTTTTGTTTTTGGGTAAGTTTTGTGAAAGATAAAGAGCATAATTAGGTCTTTTTTTCTCATTACATACAATTTGTGAATTCAAAATCTTGTCTTTTTTCATCAACAATGTCATAGGCCAATCATTCCTTTTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0108P14-gayoB/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E396658" ref_strand="+" ref_description="SGN-E396658 [TUS-43-N18]">
      <seq>gcttctataccttcatcaagattcaagatttaggattatccatagagaccttaaagcaagcaatattctgcttgataaggatttgacccccaaaatatcagattttggcatggcaagaatttttggcggagatgagactgaaggaaataccaaaagagtagttggaacctatggttacatgtctccggaatatgcaatggatggcctcttctctgttaagtccgatgttttcagctttggggttttggtgttagaaatagtaaccggaaagaagaacaggggattctattatcaaaataaccaactcaaccttcttggacatgcgtggagactctggaaagaagggagcggctcagagctactagatccatcttttggagaatctttttctccatctgaagtaatgagatgcatacaggttggactgttgtgtgtccaggaacaagcagaagaccgaccaaacatggccactgtggttttgatgctaggtagcgaaagtgcatcacttcctcagcctaaaaacccaggattttgccttggaagaagacccgttgattctgattcatattcgactaattatgaagaaacttgcactgtcaatcaagttacagttaccatgatagatccccggtagttgatggtatcgccctcagaaagtgtgtatattac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0108P14-gayoB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0108P14.2" temp_strand="-" temp_description="C02SLm0108P14.2  AC215490.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0108P14 sequenced_by:kribb upload_account_name:korea">
        <position start="18701" stop="17257"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18401" g_stop="18231" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="171" r_length="171" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18230" i_stop="18145" i_length="86">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18144" g_stop="17994" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="172" r_stop="322" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="17993" i_stop="17904" i_length="90">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.908" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="17903" g_stop="17557" g_length="347"/>
          <reference_exon_boundary r_type="cDNA" r_start="323" r_stop="669" r_length="347" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0108P14.2" gen_strand="-" ref_id="SGN-E396658" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>669</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0108P14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E396658" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18401" e_stop="18231"/>
          <exon e_start="18144" e_stop="17994"/>
          <exon e_start="17903" e_stop="17557"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTTCTATACCTTCATCAAGATTCAAGATTTAGGATTATCCATAGAGACCTTAAAGCAAGCAATATTCTGCTTGATAAGGATTTGACCCCCAAAATATCAGATTTTGGCATGGCAAGAATTTTTGGCGGAGATGAGACTGAAGGAAATACCAAAAGAGTAGTTGGAACCTAGTAAGCACACGACATAATTTCTTCACATTTTTCATAGAACCTTTAAAGCTGTTTCTAAATCTGTTTTTTTTTTTGTTTTGATGTAGTGGTTACATGTCTCCGGAATATGCAATGGATGGCCTCTTCTCTGTTAAGTCCGATGTTTTCAGCTTTGGGGTTTTGGTGTTAGAAATAGTAACCGGAAAGAAGAACAGGGGATTCTATTATCAAAATAACCAACTCAACCTTCTTGGACATGTAAGTTCACAGATCATGTGTTAGCTTCATTATTGGCAACACATTCATCATTTGATTAATTTCTGATAAAGAAAGTAATCGACTATGCAGGCGTGGAGACTCTGGAAAGAAGGGAGCGGCTCAGAGCTACTAGATCCATCTTTTGGAGAATCTTTTTCTCCATCTGAAGTAATGAGATGCATACAGGTTGGACTGTTGTGTGTCCAGGAACAAGCAGAAGACCGACCAAACATGGCCACTGTGGTTTTGATGCTAGGTAGCGAAAGTGCATCACTTCCTCAGCCTAAAAACCCAGGATTTTGCCTTGGAAGAAGACCCGTTGATTCTGATTCATATTCGACTAATTATGAAGAAACTTGCACTGTCAATCAAGTTACAGTTACCATGATAGATCCCCGGTAGTTGATGGTATCGCCCTCAGAAAGTGTGTATATTAC</genome_strand>
        <mrna_strand>GCTTCTATACCTTCATCAAGATTCAAGATTTAGGATTATCCATAGAGACCTTAAAGCAAGCAATATTCTGCTTGATAAGGATTTGACCCCCAAAATATCAGATTTTGGCATGGCAAGAATTTTTGGCGGAGATGAGACTGAAGGAAATACCAAAAGAGTAGTTGGAACCTA......................................................................................TGGTTACATGTCTCCGGAATATGCAATGGATGGCCTCTTCTCTGTTAAGTCCGATGTTTTCAGCTTTGGGGTTTTGGTGTTAGAAATAGTAACCGGAAAGAAGAACAGGGGATTCTATTATCAAAATAACCAACTCAACCTTCTTGGACAT..........................................................................................GCGTGGAGACTCTGGAAAGAAGGGAGCGGCTCAGAGCTACTAGATCCATCTTTTGGAGAATCTTTTTCTCCATCTGAAGTAATGAGATGCATACAGGTTGGACTGTTGTGTGTCCAGGAACAAGCAGAAGACCGACCAAACATGGCCACTGTGGTTTTGATGCTAGGTAGCGAAAGTGCATCACTTCCTCAGCCTAAAAACCCAGGATTTTGCCTTGGAAGAAGACCCGTTGATTCTGATTCATATTCGACTAATTATGAAGAAACTTGCACTGTCAATCAAGTTACAGTTACCATGATAGATCCCCGGTAGTTGATGGTATCGCCCTCAGAAAGTGTGTATATTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0108P14-gayoB/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E231230" ref_strand="+" ref_description="SGN-E231230 [cLED-5-F9]">
      <seq>cttctataccttcatcaagattcaagatttaggattatccatagagaccttaaagcaagcaatattctgcttgataaggatttgacccccaaaatatcagattttggcatggcaagaatttttggcggagatgagactgaaggaaataccaaaagagtagttggaacctatggttacatgtctccggaatatgcaatggatggcctcttctctgttaagtccgatgttttcagctttggggttttggtgttagaaatagtaaccggaaagaagaacaggggattctattatcaaaataaccaactcaaccttcttggacatgcgtggagactctggaaagaagggagcggctcaaagctactagatccatcttttggagaatctttttctccatctgaagtaatgagatgcatacaggttggactgttgtgtgtccaggaacaagcagaagaccgaccaaacatggccactgtggttttgatgctaggtagcgaaagtgcatcacttcctcagcctaaaaacccaggattttgccttggaagaagacccgttgattctgattcatattcgactaattatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0108P14-gayoB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0108P14.2" temp_strand="-" temp_description="C02SLm0108P14.2  AC215490.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0108P14 sequenced_by:kribb upload_account_name:korea">
        <position start="18700" stop="17345"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18400" g_stop="18231" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="170" r_length="170" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18230" i_stop="18145" i_length="86">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18144" g_stop="17994" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="171" r_stop="321" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="17993" i_stop="17904" i_length="90">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.908" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="17903" g_stop="17645" g_length="259"/>
          <reference_exon_boundary r_type="cDNA" r_start="322" r_stop="580" r_length="259" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0108P14.2" gen_strand="-" ref_id="SGN-E231230" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>580</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0108P14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E231230" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18400" e_stop="18231"/>
          <exon e_start="18144" e_stop="17994"/>
          <exon e_start="17903" e_stop="17645"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCTATACCTTCATCAAGATTCAAGATTTAGGATTATCCATAGAGACCTTAAAGCAAGCAATATTCTGCTTGATAAGGATTTGACCCCCAAAATATCAGATTTTGGCATGGCAAGAATTTTTGGCGGAGATGAGACTGAAGGAAATACCAAAAGAGTAGTTGGAACCTAGTAAGCACACGACATAATTTCTTCACATTTTTCATAGAACCTTTAAAGCTGTTTCTAAATCTGTTTTTTTTTTTGTTTTGATGTAGTGGTTACATGTCTCCGGAATATGCAATGGATGGCCTCTTCTCTGTTAAGTCCGATGTTTTCAGCTTTGGGGTTTTGGTGTTAGAAATAGTAACCGGAAAGAAGAACAGGGGATTCTATTATCAAAATAACCAACTCAACCTTCTTGGACATGTAAGTTCACAGATCATGTGTTAGCTTCATTATTGGCAACACATTCATCATTTGATTAATTTCTGATAAAGAAAGTAATCGACTATGCAGGCGTGGAGACTCTGGAAAGAAGGGAGCGGCTCAGAGCTACTAGATCCATCTTTTGGAGAATCTTTTTCTCCATCTGAAGTAATGAGATGCATACAGGTTGGACTGTTGTGTGTCCAGGAACAAGCAGAAGACCGACCAAACATGGCCACTGTGGTTTTGATGCTAGGTAGCGAAAGTGCATCACTTCCTCAGCCTAAAAACCCAGGATTTTGCCTTGGAAGAAGACCCGTTGATTCTGATTCATATTCGACTAATTATG</genome_strand>
        <mrna_strand>CTTCTATACCTTCATCAAGATTCAAGATTTAGGATTATCCATAGAGACCTTAAAGCAAGCAATATTCTGCTTGATAAGGATTTGACCCCCAAAATATCAGATTTTGGCATGGCAAGAATTTTTGGCGGAGATGAGACTGAAGGAAATACCAAAAGAGTAGTTGGAACCTA......................................................................................TGGTTACATGTCTCCGGAATATGCAATGGATGGCCTCTTCTCTGTTAAGTCCGATGTTTTCAGCTTTGGGGTTTTGGTGTTAGAAATAGTAACCGGAAAGAAGAACAGGGGATTCTATTATCAAAATAACCAACTCAACCTTCTTGGACAT..........................................................................................GCGTGGAGACTCTGGAAAGAAGGGAGCGGCTCAAAGCTACTAGATCCATCTTTTGGAGAATCTTTTTCTCCATCTGAAGTAATGAGATGCATACAGGTTGGACTGTTGTGTGTCCAGGAACAAGCAGAAGACCGACCAAACATGGCCACTGTGGTTTTGATGCTAGGTAGCGAAAGTGCATCACTTCCTCAGCCTAAAAACCCAGGATTTTGCCTTGGAAGAAGACCCGTTGATTCTGATTCATATTCGACTAATTATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0108P14-gayoB/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E233778" ref_strand="+" ref_description="SGN-E233778 [cLED-14-M12]">
      <seq>caggcttcaacacagaaatctagtccggcttcttggctgttgtgttgatatggaagagaagatgctgatctatgaatacctggagaataaaagtgtatattcaatagtgttcaataaacagaaaagctcgctgctcgactggcaaaagcggttcaatattatttgcgggattgctcgggggcttctatgccttcatcaagattcaagatttaggattatccatagagaccttaaagcaagcaatattctgcttgataaggatttgacccccaaaatatcagattctggcatggcaagaatgttcggccgagatgagactgaacgaaataccaaatgagtagccggaacctatggttacatgtctccggaatatgcaatggatggccatgtctctgttaagtccgatgttttcagctttggggttttggtgttagaaatagtaaccggaaagaagaacaggggattctattatcaaaatgaccaactcaaccttcttggacatgcgtggagactctggaaagaagggagcggctcagagctactagatccatctattggag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0108P14-gayoB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0108P14.2" temp_strand="-" temp_description="C02SLm0108P14.2  AC215490.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0108P14 sequenced_by:kribb upload_account_name:korea">
        <position start="18979" stop="17546"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18679" g_stop="18567" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="113" r_length="113" r_score="0.965"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18566" i_stop="18469" i_length="98">
            <donor d_prob="0.000" d_score="0.92"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18468" g_stop="18231" g_length="238"/>
          <reference_exon_boundary r_type="cDNA" r_start="114" r_stop="351" r_length="238" r_score="0.958"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18230" i_stop="18145" i_length="86">
            <donor d_prob="0.975" d_score="0.88"/>
            <acceptor a_prob="0.994" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18144" g_stop="17994" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="352" r_stop="502" r_length="151" r_score="0.974"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="17993" i_stop="17904" i_length="90">
            <donor d_prob="0.961" d_score="0.98"/>
            <acceptor a_prob="0.908" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="17903" g_stop="17846" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="503" r_stop="560" r_length="58" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0108P14.2" gen_strand="-" ref_id="SGN-E233778" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>560</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0108P14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E233778" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18679" e_stop="18567"/>
          <exon e_start="18468" e_stop="18231"/>
          <exon e_start="18144" e_stop="17994"/>
          <exon e_start="17903" e_stop="17846"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGGCTTCAACACAGAAATCTAGTCCGGCTTCTTGGCTGTTGTGTTGATATGGAAGAGAAGATGCTGATCTATGAATACCTGGAGAATAAAAGTTTAGATTCAATTTTGTTCAGTAAGGCTTTTTCATTATATCGTCAAGAGAGTAGTGTTTCACATCATTTACTTAGATGCTCATATAATTTGTGACTCACATTTGAATATGCTCCTCAGATAAACAGAAAAGCTCGCTGCTCGACTGGCAAAAGCGGTTCAATATTATTTGTGGGATTGCTCGGGGGCTTCTATACCTTCATCAAGATTCAAGATTTAGGATTATCCATAGAGACCTTAAAGCAAGCAATATTCTGCTTGATAAGGATTTGACCCCCAAAATATCAGATTTTGGCATGGCAAGAATTTTTGGCGGAGATGAGACTGAAGGAAATACCAAAAGAGTAGTTGGAACCTAGTAAGCACACGACATAATTTCTTCACATTTTTCATAGAACCTTTAAAGCTGTTTCTAAATCTGTTTTTTTTTTTGTTTTGATGTAGTGGTTACATGTCTCCGGAATATGCAATGGATGGCCTCTTCTCTGTTAAGTCCGATGTTTTCAGCTTTGGGGTTTTGGTGTTAGAAATAGTAACCGGAAAGAAGAACAGGGGATTCTATTATCAAAATAACCAACTCAACCTTCTTGGACATGTAAGTTCACAGATCATGTGTTAGCTTCATTATTGGCAACACATTCATCATTTGATTAATTTCTGATAAAGAAAGTAATCGACTATGCAGGCGTGGAGACTCTGGAAAGAAGGGAGCGGCTCAGAGCTACTAGATCCATCTTTTGGAG</genome_strand>
        <mrna_strand>CAGGCTTCAACACAGAAATCTAGTCCGGCTTCTTGGCTGTTGTGTTGATATGGAAGAGAAGATGCTGATCTATGAATACCTGGAGAATAAAAGTGTATATTCAATAGTGTTCA..................................................................................................ATAAACAGAAAAGCTCGCTGCTCGACTGGCAAAAGCGGTTCAATATTATTTGCGGGATTGCTCGGGGGCTTCTATGCCTTCATCAAGATTCAAGATTTAGGATTATCCATAGAGACCTTAAAGCAAGCAATATTCTGCTTGATAAGGATTTGACCCCCAAAATATCAGATTCTGGCATGGCAAGAATGTTCGGCCGAGATGAGACTGAACGAAATACCAAATGAGTAGCCGGAACCTA......................................................................................TGGTTACATGTCTCCGGAATATGCAATGGATGGCCATGTCTCTGTTAAGTCCGATGTTTTCAGCTTTGGGGTTTTGGTGTTAGAAATAGTAACCGGAAAGAAGAACAGGGGATTCTATTATCAAAATGACCAACTCAACCTTCTTGGACAT..........................................................................................GCGTGGAGACTCTGGAAAGAAGGGAGCGGCTCAGAGCTACTAGATCCATCTATTGGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0108P14-gayoB/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E310509" ref_strand="+" ref_description="SGN-E310509 [cTOA-9-M7]">
      <seq>caaattggaggtgatggatctggaaatagttctcgcaagacaaaaatagttgcaatagctgctggggttacagttggtatatctcttgtgttatttggactaaccctttgcatcttatcaaagagaagaaaacatcaaagttcaatccgaactaaatccgtgaacagaggcactatcgaacgaagtcaagagcttttgatgaatgcaactattattccaagtcaaagagaattttctggtgaaacttccacggaagagtttgaattgccattgtttgattacagtaccctatctacggcaacagaaaatttttctgacgcgactaagttgggccaaggaggctttggttgcgttgatatggaagagaagatgctgatctatgaatacctggagaataaaagtttagattcaattttgttcaataaacagaaaagctcgctgctcgactggcaaaagcggttcaatattatttgtgggattgctcgggggcttctataccttcatcaagattcaagat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0108P14-gayoB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0108P14.2" temp_strand="-" temp_description="C02SLm0108P14.2  AC215490.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0108P14 sequenced_by:kribb upload_account_name:korea">
        <position start="19607" stop="18073"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19307" g_stop="19139" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="169" r_length="169" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19138" i_stop="19051" i_length="88">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.694" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19050" g_stop="18874" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="170" r_stop="346" r_length="177" r_score="0.977"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18873" i_stop="18642" i_length="232">
            <donor d_prob="0.434" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18641" g_stop="18567" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="347" r_stop="421" r_length="75" r_score="0.987"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18566" i_stop="18469" i_length="98">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18468" g_stop="18373" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="422" r_stop="517" r_length="96" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0108P14.2" gen_strand="-" ref_id="SGN-E310509" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>517</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0108P14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E310509" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19307" e_stop="19139"/>
          <exon e_start="19050" e_stop="18874"/>
          <exon e_start="18641" e_stop="18567"/>
          <exon e_start="18468" e_stop="18373"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAATTGGAGGTGAAGGATCTGGAAATAGTTCTCGCAAGACAAAAATAGTTGCAATAGCTGCTGGGGTTACAGTTGGTATAGCTCTTGTGTTATTTGGACTAACCCTTTGCATCTTATCAAAGAGAAGAAAACATCAAAGTTCAATCCGAACTAAATCCGTGAACAGAGGTATTATATGAATCTATCCTGATTAATAAGATTGTCTAATATAAAATGCTTCATTTTCTCATGAATGTTTCTCATGATCCTAAACCAGGCACTAGCGAACGAAGTCAAGAGCTTTTGATGAATGCAACTATTATTCCAAGTAAAAGAGAATTTTCTGGTGAAACTTCCACGGAAGAGTTTGAATTGCCATTGTTTGATTACAGTACCCTAGCTACGGCAACAGAAAATTTTTCTGACGCGACTAAGTTGGGCCAAGGTGGCTTTGGTTGTGTTTACAAGGTAAATCTCAGTTATATGTAAACCATAGTGATATTATAAGAAGAAAAAGTTATCGACAAACTCAATAATATAATCTTTTGATCAGGCAATGCTGGTTGGTCAAGAAGTAGCAGTCAAAAGGCTCTCGAAGAATTCTGGACAAGGAGTAGAGGAATTTAAAAATGAGCTAAGATTGATTGCCAGGCTTCAACACAGAAATCTAGTCCGGCTTCTTGGCTGTTGTGTTGATATGGAAGAGAAGATGCTGATCTATGAATACCTGGAGAATAAAAGTTTAGATTCAATTTTGTTCAGTAAGGCTTTTTCATTATATCGTCAAGAGAGTAGTGTTTCACATCATTTACTTAGATGCTCATATAATTTGTGACTCACATTTGAATATGCTCCTCAGATAAACAGAAAAGCTCGCTGCTCGACTGGCAAAAGCGGTTCAATATTATTTGTGGGATTGCTCGGGGGCTTCTATACCTTCATCAAGATTCAAGAT</genome_strand>
        <mrna_strand>CAAATTGGAGGTGATGGATCTGGAAATAGTTCTCGCAAGACAAAAATAGTTGCAATAGCTGCTGGGGTTACAGTTGGTATATCTCTTGTGTTATTTGGACTAACCCTTTGCATCTTATCAAAGAGAAGAAAACATCAAAGTTCAATCCGAACTAAATCCGTGAACAGAG........................................................................................GCACTATCGAACGAAGTCAAGAGCTTTTGATGAATGCAACTATTATTCCAAGTCAAAGAGAATTTTCTGGTGAAACTTCCACGGAAGAGTTTGAATTGCCATTGTTTGATTACAGTACCCTATCTACGGCAACAGAAAATTTTTCTGACGCGACTAAGTTGGGCCAAGGAGGCTTTG........................................................................................................................................................................................................................................GTTGCGTTGATATGGAAGAGAAGATGCTGATCTATGAATACCTGGAGAATAAAAGTTTAGATTCAATTTTGTTCA..................................................................................................ATAAACAGAAAAGCTCGCTGCTCGACTGGCAAAAGCGGTTCAATATTATTTGTGGGATTGCTCGGGGGCTTCTATACCTTCATCAAGATTCAAGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0108P14-gayoB/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E278874" ref_strand="+" ref_description="SGN-E278874 [cLER-2-A21]">
      <seq>actttgtcattcgaccggaaaacgatgacagggaacagagttacctatggcagagctttgattatccaacaaacactttattacctgggatgaaacttgggtgggattcaaaatccgggatgaatagaaacataacatcatggaaatcagcaattgacccagctcccggagtcaagtagttgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0108P14-gayoB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0108P14.2" temp_strand="-" temp_description="C02SLm0108P14.2  AC215490.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0108P14 sequenced_by:kribb upload_account_name:korea">
        <position start="22964" stop="22186"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22664" g_stop="22494" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="171" r_length="171" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0108P14.2" gen_strand="-" ref_id="SGN-E278874" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>171</cumulative_length_of_scored_exons>
        <coverage percentage="0.934" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0108P14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E278874" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22664" e_stop="22494"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTTTGTCATTCGACCGGAAAACGATGACAGGGAACAGAGTTACCTATGGCAGAGCTTTGATTATCCAACAAACACTTTATTACCTGGGATGAAACTTGGGTGGGATTCAAAATCCGGGATGAATAGAAACATAACATCATGGAAATCAGCAATTGACCCAGCTCCCGGAG</genome_strand>
        <mrna_strand>ACTTTGTCATTCGACCGGAAAACGATGACAGGGAACAGAGTTACCTATGGCAGAGCTTTGATTATCCAACAAACACTTTATTACCTGGGATGAAACTTGGGTGGGATTCAAAATCCGGGATGAATAGAAACATAACATCATGGAAATCAGCAATTGACCCAGCTCCCGGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0108P14-gayoB/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E467281" ref_strand="+" ref_description="SGN-E467281 [cSTB-44-I5]">
      <seq>gaattcggcacgaggaacaagtacactcaacaaatgtctcaagcaccaacactgcagcaaaacaaaatactcttttcttaaattccacaatgagaaacaccaaagattactactttcaccaattcttgttcttgattttgatttctcaatttcttcatccaattctagctatacccactgatacaatcaccccaacacagcctttaaccaaagatcaaaccttagtatcttccgatcaacactttgaattaggctttttctctcccggcgaagcaaattcagacaaatggtatatcggtatttggtacaaagagattcaagacaggactattgtctgggttgcaaacagagctaaacccctttcagcttcatcaacatcagtcctaaaaatcacagaaattggtacccttcttctcgtcga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0108P14-gayoB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0108P14.2" temp_strand="-" temp_description="C02SLm0108P14.2  AC215490.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0108P14 sequenced_by:kribb upload_account_name:korea">
        <position start="23455" stop="22445"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23149" g_stop="22745" g_length="405"/>
          <reference_exon_boundary r_type="cDNA" r_start="16" r_stop="421" r_length="406" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0108P14.2" gen_strand="-" ref_id="SGN-E467281" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>405</cumulative_length_of_scored_exons>
        <coverage percentage="0.962" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0108P14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E467281" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23149" e_stop="22745"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAAGTACAC-CAACAAATGTCTCAAACACCAACACTGCAGCAAAACAAAATATTTTTTTCTTAAATTACACAATGAGAAACACCAAAGATTACTACTTTCACCAATTCTTGTTCTTGATTTTGATTTCTCAATTTCTTCATCCAATTCTTGCTATACCCACTGATACAATCACCCCAACACAGTCTTTAACCAAAGATCAAACCTTAGTATCTTCCGATCAACTCTTTGAATTAGGCTTTTTCTCTCCAGGCGGTGCAAATTCAGACAAATGGTATATCGGTATTTGGTATAAAGAGATTCAAGACAGGACTATTGTCTGGGTTGCAAACAGAGCTAAACCCCTTTCAGCTTCATCAACATCAGTCCTAAAAATCACAGAAATTGGTACCCTTCTTCTCGTCGA</genome_strand>
        <mrna_strand>AACAAGTACACTCAACAAATGTCTCAAGCACCAACACTGCAGCAAAACAAAATACTCTTTTCTTAAATTCCACAATGAGAAACACCAAAGATTACTACTTTCACCAATTCTTGTTCTTGATTTTGATTTCTCAATTTCTTCATCCAATTCTAGCTATACCCACTGATACAATCACCCCAACACAGCCTTTAACCAAAGATCAAACCTTAGTATCTTCCGATCAACACTTTGAATTAGGCTTTTTCTCTCCCGGCGAAGCAAATTCAGACAAATGGTATATCGGTATTTGGTACAAAGAGATTCAAGACAGGACTATTGTCTGGGTTGCAAACAGAGCTAAACCCCTTTCAGCTTCATCAACATCAGTCCTAAAAATCACAGAAATTGGTACCCTTCTTCTCGTCGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0108P14-gayoB/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E330047" ref_strand="+" ref_description="SGN-E330047 [cTOD-5-I11]">
      <seq>taaatgtgggtcagtgttcactgcttggttggtttttgataagatggaggctaagacggctgtatcattgaatgctatgatagatggatatgcacggaatggatatcacgatgaagctcttatcatctttcagaaaatgttggatgaaggattcaaaccaacgaatgtgactattatgagcactttacatgcgtgtgctgaaacaaggaatattgagcttggacaatatgttcacaaactggtcaaccaactaggtcttggttctaatgttgcagttgttaactcgttgatttcaatgtattgcaagtgccaaagagtggatattgcagctgaattgttcgaaaacttgaaaggaaaaacacttgtttcatggaatgctttgattttgggctatgcacaaaatggatgtgtaatggatgcattaactcatttttgtgaaatgcatctgcagaacatcacacctgattcatttacaatggtaagtgttgttactgctcttgctgagttaatcagtataacgccaagctaagtggatacatggatttgctgtaagaactt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0108P14-gayoB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0108P14.2" temp_strand="+" temp_description="C02SLm0108P14.2  AC215490.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0108P14 sequenced_by:kribb upload_account_name:korea">
        <position start="25215" stop="26371"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25515" g_stop="26071" g_length="557"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="558" r_length="558" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0108P14.2" gen_strand="+" ref_id="SGN-E330047" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>557</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0108P14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E330047" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25515" e_stop="26071"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAATGTGGGTCAGTGGGCACTGCTAGGTTGGTTTTTGATAAGATGGATTCTAAGACGGCTGTATCATTGAATGCTATGATAGATGGATATGCACGGAATGGATATCACGATGAAGCTCTTATCATCTTTCAGAAAATGTTGGATGAAGGATTCAAACCAACGAATGTGACTATTATGAGCACTTTACATGCGTGTGCTGAAACAAGGAATATTGAGCTTGGACAATATGTTCACAAACTGGTCAACCAACTAGGTCTTGGTTCTAATGTTGCAGTTGTTAACTCGTTGATTTCAATGTATTGCAAGTGCCAAAGAGTGGATATTGCAGCTGAATTGTTTGAAAACTTGAAAGGAAAAACACTTGTTTCATGGAATGCTTTGATTTTGGGCTATGCACAAAATGGATGTGTAATGGATGCATTAACTCATTTTTGTGAAATGCATCTGCAGAACATCACACCTGATTCATTTACAATGGTAAGTGTTGTTACTGCTCTTGCTGAGTT-ATCAGTATTACGCCAAGCTAAGTGGATACATGGATTTGCTGTAAGAACTT</genome_strand>
        <mrna_strand>TAAATGTGGGTCAGTGTTCACTGCTTGGTTGGTTTTTGATAAGATGGAGGCTAAGACGGCTGTATCATTGAATGCTATGATAGATGGATATGCACGGAATGGATATCACGATGAAGCTCTTATCATCTTTCAGAAAATGTTGGATGAAGGATTCAAACCAACGAATGTGACTATTATGAGCACTTTACATGCGTGTGCTGAAACAAGGAATATTGAGCTTGGACAATATGTTCACAAACTGGTCAACCAACTAGGTCTTGGTTCTAATGTTGCAGTTGTTAACTCGTTGATTTCAATGTATTGCAAGTGCCAAAGAGTGGATATTGCAGCTGAATTGTTCGAAAACTTGAAAGGAAAAACACTTGTTTCATGGAATGCTTTGATTTTGGGCTATGCACAAAATGGATGTGTAATGGATGCATTAACTCATTTTTGTGAAATGCATCTGCAGAACATCACACCTGATTCATTTACAATGGTAAGTGTTGTTACTGCTCTTGCTGAGTTAATCAGTATAACGCCAAGCTAAGTGGATACATGGATTTGCTGTAAGAACTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0108P14-gayoB/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E699676" ref_strand="+" ref_description="SGN-E699676 [FA10DE10]">
      <seq>ccctttaaaaacttgaaaggaaaaacacttgtttcatggaatgctttgattttgggctatgcacaaaatggatgtgtaatggatgcattaactcatttttgtgaaatgcatctgcagaacatcacacctgattcatttacaatggtaagtgttgttactgctcttgctgagttatcagtattacgccaagctaagtggatacatggatttgctgtaagaacttgtttgaacgggaatgtttttgtagccactgcacttgttgacatgtatgcaaaatgtggagcagttcacacagcaacaaagctatttgacatgatggatgataggcatgttacaacatggaatgccatgatagatggatatggcacacatggctttggaaaggaagctgttgaattatttgaggaaatgagaaaggggcatgtagagcctaacgacataacatttctctgtgtcatctcagcttgcagccactctggctttgtacacaaggggcgcaactatttcacgatcctgagggaagaatacaacttgcagccttcaatggaccattatggggcaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0108P14-gayoB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0108P14.2" temp_strand="+" temp_description="C02SLm0108P14.2  AC215490.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0108P14 sequenced_by:kribb upload_account_name:korea">
        <position start="25552" stop="26711"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25849" g_stop="26411" g_length="563"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="563" r_length="563" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0108P14.2" gen_strand="+" ref_id="SGN-E699676" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>563</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0108P14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E699676" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25849" e_stop="26411"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTTTGAAAACTTGAAAGGAAAAACACTTGTTTCATGGAATGCTTTGATTTTGGGCTATGCACAAAATGGATGTGTAATGGATGCATTAACTCATTTTTGTGAAATGCATCTGCAGAACATCACACCTGATTCATTTACAATGGTAAGTGTTGTTACTGCTCTTGCTGAGTTATCAGTATTACGCCAAGCTAAGTGGATACATGGATTTGCTGTAAGAACTTGTTTGAACGGGAATGTTTTTGTAGCCACTGCACTTGTTGACATGTATGCAAAATGTGGAGCAGTTCACACAGCAAGAAAGCTATTTGACATGATGGATGATAGGCATGTTACAACATGGAATGCCATGATAGATGGATATGGCACACATGGCTTTGGAAAGGAAGCTGTTGAATTATTTGAGGAAATGAGAAAGGGGCATGTAGAGCCTAACGACATAACATTTCTCTGTGTCATCTCAGCTTGCAGCCACTCTGGCTTTGTAGACAAGGGGCGCAACTATTTCACGATCATGAGGGAAGAATACAACTTGGAGCCTTCAATGGACCATTATGGGGCAAT</genome_strand>
        <mrna_strand>CCCTTTAAAAACTTGAAAGGAAAAACACTTGTTTCATGGAATGCTTTGATTTTGGGCTATGCACAAAATGGATGTGTAATGGATGCATTAACTCATTTTTGTGAAATGCATCTGCAGAACATCACACCTGATTCATTTACAATGGTAAGTGTTGTTACTGCTCTTGCTGAGTTATCAGTATTACGCCAAGCTAAGTGGATACATGGATTTGCTGTAAGAACTTGTTTGAACGGGAATGTTTTTGTAGCCACTGCACTTGTTGACATGTATGCAAAATGTGGAGCAGTTCACACAGCAACAAAGCTATTTGACATGATGGATGATAGGCATGTTACAACATGGAATGCCATGATAGATGGATATGGCACACATGGCTTTGGAAAGGAAGCTGTTGAATTATTTGAGGAAATGAGAAAGGGGCATGTAGAGCCTAACGACATAACATTTCTCTGTGTCATCTCAGCTTGCAGCCACTCTGGCTTTGTACACAAGGGGCGCAACTATTTCACGATCCTGAGGGAAGAATACAACTTGCAGCCTTCAATGGACCATTATGGGGCAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0108P14-gayoB/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E366247" ref_strand="+" ref_description="SGN-E366247 [cLPT-1-K6]">
      <seq>acgatcatgagggaagaatacaacttggagccttcaatggaccattatggggcaatggttgacctaattggtcgagctggtcggctgagtgaggcttggaacttcattgataatatgcctaccagaccaggactcaatgtctatggtgcaatgttgggagcttgcaagattcacaaaaatgtagaattgggggagaaggcagcagacaaactatttgagctagatcccgatgatggtggatatcatgtgcttcttgctaatatgtacgccacggcttcaatatggcataaagttgctaatgtcagaactatgatggagagaaaaggtattcaaaagacacctggatggagtctagttgatttaagaaacgaggtccacacattctactcaggaagcactagccatcctcagtcagagaagatctatgcttaccttgagaaactgtttgataggattaaagctgctggatatatacctgatactaattcaattcacgatgtggaagatgttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0108P14-gayoB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0108P14.2" temp_strand="+" temp_description="C02SLm0108P14.2  AC215490.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0108P14 sequenced_by:kribb upload_account_name:korea">
        <position start="26056" stop="27166"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26356" g_stop="26866" g_length="511"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="511" r_length="511" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0108P14.2" gen_strand="+" ref_id="SGN-E366247" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>511</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0108P14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E366247" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26356" e_stop="26866"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACGATCATGAGGGAAGAATACAACTTGGAGCCTTCAATGGACCATTATGGGGCAATGGTTGACCTAATTGGTCGAGCTGGTCGGCTGAGTGAGGCTTGGAACTTCATTGATAATATGCCTACCAGACCAGGACTCAATGTCTATGGTGCAATGTTGGGAGCTTGCAAGATTCACAAAAATGTAGATTTGGGGGAGAAGGCAGCAGACAAACTATTTGAGCTAGATCCCGATGATGGTGGATATCATGTGCTTCTTGCTAATATGTACGCCAGGGCTTCAATATGGCATAAAGTTGCTAATGTCAGAACTATGATGGAGAGAAAAGGTATTCAAAAGACACCTGGATGGAGTCTAGTTGATTTAAGAAACGAGGTCCACACATTCTACTCAGGAAGCACTAGCCATCCTCAGTCAGAGAAGATCTATGCTTACCTTGAGAAACTGTTTGATAGGATTAAAGCTGCTGGATATATACCTGATACTGATTCAATTCACGATGTGGAAGATGTTG</genome_strand>
        <mrna_strand>ACGATCATGAGGGAAGAATACAACTTGGAGCCTTCAATGGACCATTATGGGGCAATGGTTGACCTAATTGGTCGAGCTGGTCGGCTGAGTGAGGCTTGGAACTTCATTGATAATATGCCTACCAGACCAGGACTCAATGTCTATGGTGCAATGTTGGGAGCTTGCAAGATTCACAAAAATGTAGAATTGGGGGAGAAGGCAGCAGACAAACTATTTGAGCTAGATCCCGATGATGGTGGATATCATGTGCTTCTTGCTAATATGTACGCCACGGCTTCAATATGGCATAAAGTTGCTAATGTCAGAACTATGATGGAGAGAAAAGGTATTCAAAAGACACCTGGATGGAGTCTAGTTGATTTAAGAAACGAGGTCCACACATTCTACTCAGGAAGCACTAGCCATCCTCAGTCAGAGAAGATCTATGCTTACCTTGAGAAACTGTTTGATAGGATTAAAGCTGCTGGATATATACCTGATACTAATTCAATTCACGATGTGGAAGATGTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0108P14-gayoB/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E480526" ref_strand="+" ref_description="SGN-E480526 [cSTD-14-O21]">
      <seq>ccaggactcaatgtctatggtgcaatgttgggagcttgcaagattcacaaaaatgttgatttgggggagaaggcagcagacaagctatttgagctagatcccgatgatggtggatatcatgtgcttcttgctaatatgtacgccacggcttcaatatggcataaagttgctaacgtcagaactatgatggagagaaaaggtattcaaaagacacctggatggagtctagttgatttaagaaacgaggtccacacattctactcaggaagcactagccatcctcagtcagagaagatctatgcttaccttgagaaactgtttgataggattaaagctgctggatatatacctgatactgattcaattcacgatgtggaagatgttgttcaggagcaattgctaaagagccacagtgagaagcttgctattgcatttgggcttttaaatacaagtgctggtacaactgttcacatcaggaaaaatctccgggtttgtggtgactgccatagtgcaacaaagtacatctcgcttgtcatgaaacgagaaattattgtacgtgatatgcaccgtttccaccattttaaggatggagtctgttcatgtggagattactggtgatctgaatgattgataactctaccaagttgttagctcatgttaattatgtaaaacattttattattctgatatagaataaccacaccacatgggtatctggaacaaaggtgggaaagtgacgactgatgtggaactgatttctctaactggttaaaatct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0108P14-gayoB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0108P14.2" temp_strand="+" temp_description="C02SLm0108P14.2  AC215490.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0108P14 sequenced_by:kribb upload_account_name:korea">
        <position start="26182" stop="27559"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26482" g_stop="27259" g_length="778"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="777" r_length="777" r_score="0.947"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0108P14.2" gen_strand="+" ref_id="SGN-E480526" ref_strand="+">
        <total_alignment_score>0.947</total_alignment_score>
        <cumulative_length_of_scored_exons>778</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0108P14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E480526" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26482" e_stop="27259"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAGGACTCAATGTCTATGGTGCAATGTTGGGAGCTTGCAAGATTCACAAAAATGTAGATTTGGGGGAGAAGGCAGCAGACAAACTATTTGAGCTAGATCCCGATGATGGTGGATATCATGTGCTTCTTGCTAATATGTACGCCAGGGCTTCAATATGGCATAAAGTTGCTAATGTCAGAACTATGATGGAGAGAAAAGGTATTCAAAAGACACCTGGATGGAGTCTAGTTGATTTAAGAAACGAGGTCCACACATTCTACTCAGGAAGCACTAGCCATCCTCAGTCAGAGAAGATCTATGCTTACCTTGAGAAACTGTTTGATAGGATTAAAGCTGCTGGATATATACCTGATACTGATTCAATTCACGATGTGGAAGATGTTGTTCAGGAGCAACTGCTAAAGAGCCACAGTGAGAAGCTTGCTATTGTATTTGGTCTTTTAAATACGAGTGCTGGTACAACTATTCACATCAGGAAAAATCTCCGGGTTTGTGGTGACTGCCATACTGCAACAAAGTACATCTCGCTTGTCATGAAACGAGAAATTATTGTACGTGATATGCACCGTTTCCACCATTTTAAGGATGGAGTCTGTTCATGTGGAGATTACTGGTGATATGAATGA-T--T-ACTCTACCAAGTTGTTACCTCAT-TTAACTATGTAAAACATTTTATTATTCTGATATAGAATAACCACACCACATGGATGCACCATATCTAGCACAAAGGT-CGAGAGTCACGATTGAGGTGAAACTGATTTCTCTAACTGGTTAAAAGCT</genome_strand>
        <mrna_strand>CCAGGACTCAATGTCTATGGTGCAATGTTGGGAGCTTGCAAGATTCACAAAAATGTTGATTTGGGGGAGAAGGCAGCAGACAAGCTATTTGAGCTAGATCCCGATGATGGTGGATATCATGTGCTTCTTGCTAATATGTACGCCACGGCTTCAATATGGCATAAAGTTGCTAACGTCAGAACTATGATGGAGAGAAAAGGTATTCAAAAGACACCTGGATGGAGTCTAGTTGATTTAAGAAACGAGGTCCACACATTCTACTCAGGAAGCACTAGCCATCCTCAGTCAGAGAAGATCTATGCTTACCTTGAGAAACTGTTTGATAGGATTAAAGCTGCTGGATATATACCTGATACTGATTCAATTCACGATGTGGAAGATGTTGTTCAGGAGCAATTGCTAAAGAGCCACAGTGAGAAGCTTGCTATTGCATTTGGGCTTTTAAATACAAGTGCTGGTACAACTGTTCACATCAGGAAAAATCTCCGGGTTTGTGGTGACTGCCATAGTGCAACAAAGTACATCTCGCTTGTCATGAAACGAGAAATTATTGTACGTGATATGCACCGTTTCCACCATTTTAAGGATGGAGTCTGTTCATGTGGAGATTACTGGTGATCTGAATGATTGATAACTCTACCAAGTTGTTAGCTCATGTTAATTATGTAAAACATTTTATTATTCTGATATAGAATAACCACACCACATGG--G-----TATCTGGAACAAAGGTGGGAAAGTGACGACTGATGTGGAACTGATTTCTCTAACTGGTTAAAATCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0108P14-gayoB/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E428601" ref_strand="+" ref_description="SGN-E428601 [STM-50-J11]">
      <seq>ccaggactcaatgtctatggtgcaatgttgggagcttgcaagattcacaaaaatgttgatttgggggagaaggcagcagacaagctatttgagctagatcccgatgatggtggatatcatgtgcttcttgctaatatgtacgccacggcttcaatatggcataaagttgctaacgtcagaactatgatggagagaaaaggtattcaaaagacacctggatggagtctagttgatttaagaaacgaggtccacacattctactcaggaagcactagccatcctcagtcagagaagatctatgcttaccttgagaaactgtttgataggattaaagctgctggatatatacctgatactgattcaattcacgatgtggaagatgttgttcaggagcaattgctaaagagccacagtgagaagcttgctattgcatttgggcttttaaatacaagtgctggtacaactgttcacatcaggaaaaatctccgggtttgtggtgactgccatagtgcaacaaagtacatctcgcttgtcatgaaacgagaaattattgtacgtgatatgcaccgtttccaccattttaaggatggagtctgttcatgtgggagatactggtgatct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0108P14-gayoB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0108P14.2" temp_strand="+" temp_description="C02SLm0108P14.2  AC215490.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0108P14 sequenced_by:kribb upload_account_name:korea">
        <position start="26182" stop="27402"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26482" g_stop="27102" g_length="621"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="621" r_length="621" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0108P14.2" gen_strand="+" ref_id="SGN-E428601" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>621</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0108P14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E428601" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26482" e_stop="27102"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAGGACTCAATGTCTATGGTGCAATGTTGGGAGCTTGCAAGATTCACAAAAATGTAGATTTGGGGGAGAAGGCAGCAGACAAACTATTTGAGCTAGATCCCGATGATGGTGGATATCATGTGCTTCTTGCTAATATGTACGCCAGGGCTTCAATATGGCATAAAGTTGCTAATGTCAGAACTATGATGGAGAGAAAAGGTATTCAAAAGACACCTGGATGGAGTCTAGTTGATTTAAGAAACGAGGTCCACACATTCTACTCAGGAAGCACTAGCCATCCTCAGTCAGAGAAGATCTATGCTTACCTTGAGAAACTGTTTGATAGGATTAAAGCTGCTGGATATATACCTGATACTGATTCAATTCACGATGTGGAAGATGTTGTTCAGGAGCAACTGCTAAAGAGCCACAGTGAGAAGCTTGCTATTGTATTTGGTCTTTTAAATACGAGTGCTGGTACAACTATTCACATCAGGAAAAATCTCCGGGTTTGTGGTGACTGCCATACTGCAACAAAGTACATCTCGCTTGTCATGAAACGAGAAATTATTGTACGTGATATGCACCGTTTCCACCATTTTAAGGATGGAGTCTGTTCATGTGGAGATTACTGGTGATAT</genome_strand>
        <mrna_strand>CCAGGACTCAATGTCTATGGTGCAATGTTGGGAGCTTGCAAGATTCACAAAAATGTTGATTTGGGGGAGAAGGCAGCAGACAAGCTATTTGAGCTAGATCCCGATGATGGTGGATATCATGTGCTTCTTGCTAATATGTACGCCACGGCTTCAATATGGCATAAAGTTGCTAACGTCAGAACTATGATGGAGAGAAAAGGTATTCAAAAGACACCTGGATGGAGTCTAGTTGATTTAAGAAACGAGGTCCACACATTCTACTCAGGAAGCACTAGCCATCCTCAGTCAGAGAAGATCTATGCTTACCTTGAGAAACTGTTTGATAGGATTAAAGCTGCTGGATATATACCTGATACTGATTCAATTCACGATGTGGAAGATGTTGTTCAGGAGCAATTGCTAAAGAGCCACAGTGAGAAGCTTGCTATTGCATTTGGGCTTTTAAATACAAGTGCTGGTACAACTGTTCACATCAGGAAAAATCTCCGGGTTTGTGGTGACTGCCATAGTGCAACAAAGTACATCTCGCTTGTCATGAAACGAGAAATTATTGTACGTGATATGCACCGTTTCCACCATTTTAAGGATGGAGTCTGTTCATGTGGGAGATACTGGTGATCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0108P14-gayoB/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E578379" ref_strand="+" ref_description="SGN-E578379 [LE12DB06]">
      <seq>tttttttcaaagaagctaatgacaatatgtctttattccaaaattcaaacaccctgctaaaatcagcataataacaacgttttctctctctaagccccactcggacattattattcatcactcttagcctctctggaaagtggcaaagctaaatacaggaagcttctcttcttccgccttttttttccctattggcactgactgcacataaaactacaaatttatgtaaatattcagcttcacagtactcccttatctttgttcaccccctccagttccaaagaacaaagattctttgaatagtctataacataaaagtacaaataggcgaattttctctacacaattatgctaatagtgaaacctatagagattgtgcatctaattagttgcaattctacactctgctttagtttagagttcaattcattcaaagatcctccacgtatctgttcccactcgaacaaaactgctatgcatgagacaacaaaatcaatgaaaacaaaatagggacgctggttcactgtcttactatcttagcaccactgaacctgagaaatctggaacgtttgatcatcccttatatcgctcaatctccgctttttgatattgtccttatcctgagtctcgcattgagagcttgtatgttcacactccagaacactttttggcgtcaacttactacagtactccctcccttctatcggcatttcccgcattacagccaaagcattc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0108P14-gayoB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0108P14.2" temp_strand="+" temp_description="C02SLm0108P14.2  AC215490.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0108P14 sequenced_by:kribb upload_account_name:korea">
        <position start="28802" stop="30136"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29102" g_stop="29836" g_length="735"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="735" r_length="735" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0108P14.2" gen_strand="+" ref_id="SGN-E578379" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>735</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0108P14.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E578379" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29102" e_stop="29836"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGCTTTCAAAGAAGCTAATGACAATATGTCTTTATTCCAAAATTCAAACACCCTGCTAAAATCAGCATAATAACAACGTTTTCTCTCTCTAAGCCCCACTCGGACATTATTATTCATCACTCTTAGCCTCTCTGGAAAGTGGCAAAGCTAAATACAGGAAGCTTCTCTTCTTCCGCCTTTTTTTTCCCTATTGGCACTGACTGCACATAAAACTACAAATTTATGTAAATATTCAGCTTCACAGTACTCCCTTATCTTTGTTCACCCCCTCCAGTTCCAAAGAACAAAGATTCTTTGAATAGTCTATAACATAAAAGTACAAATAGGCGAATTTTCTCTACACAATTATGCTAATAGTGAAACCTATAGAGATTGTGCATCTAATTAGTTGCAATTCTACACTCTGCTTTAGTTTAGAGTTCAATTCATTCAAAGATCCTCCACGTATCTGTTCCCACTCGAACAAAACTGCTATGCATGAGACAACAAAATCAATGAAAACAAAATAGGGACGCTGGTTCACTGTCTTACTATCTTAGCACCACTGAACCTGAGAAATCTGGAACGTTTGATCATCCCTTATATCGCTCAATCTCCGCTTTTTGATATTGTCCTTATCCTGAGTCTCGCATTGAGAGCTTGTATGTTCACACTCCAGAACACTTTTTGGCGTCAACTTACTACAGTACTCCCTCCCTTCTATCGGCATTTCCCGCATTACAGCCAAAGCATTC</genome_strand>
        <mrna_strand>TTTTTTTCAAAGAAGCTAATGACAATATGTCTTTATTCCAAAATTCAAACACCCTGCTAAAATCAGCATAATAACAACGTTTTCTCTCTCTAAGCCCCACTCGGACATTATTATTCATCACTCTTAGCCTCTCTGGAAAGTGGCAAAGCTAAATACAGGAAGCTTCTCTTCTTCCGCCTTTTTTTTCCCTATTGGCACTGACTGCACATAAAACTACAAATTTATGTAAATATTCAGCTTCACAGTACTCCCTTATCTTTGTTCACCCCCTCCAGTTCCAAAGAACAAAGATTCTTTGAATAGTCTATAACATAAAAGTACAAATAGGCGAATTTTCTCTACACAATTATGCTAATAGTGAAACCTATAGAGATTGTGCATCTAATTAGTTGCAATTCTACACTCTGCTTTAGTTTAGAGTTCAATTCATTCAAAGATCCTCCACGTATCTGTTCCCACTCGAACAAAACTGCTATGCATGAGACAACAAAATCAATGAAAACAAAATAGGGACGCTGGTTCACTGTCTTACTATCTTAGCACCACTGAACCTGAGAAATCTGGAACGTTTGATCATCCCTTATATCGCTCAATCTCCGCTTTTTGATATTGTCCTTATCCTGAGTCTCGCATTGAGAGCTTGTATGTTCACACTCCAGAACACTTTTTGGCGTCAACTTACTACAGTACTCCCTCCCTTCTATCGGCATTTCCCGCATTACAGCCAAAGCATTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0108P14-gayoB/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E280044" ref_strand="-" ref_description="SGN-E280044 [cLEL-7-B19](-)">
      <seq>gcacgagcgacgccgtttcagctctctttgccaacgagtccgatcacatgccgtcgtttctcgacttcacatccaccgatgtgcgcttttcccttcgccgccattctgttttccttatttctcaagtacaaagttcttacaaatttgatggctatattgcatacctcgccgtcaattacattgatcgttttctctccaaacaagcagttctggagaataagccatggattgtacggattctcgtcattgttagcctttctcttgccgcaaaaatgaggaacgtcgatttatcactgacggatattcagag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0108P14-gayoB/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0108P14.2" temp_strand="-" temp_description="C02SLm0108P14.2  AC215490.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0108P14 sequenced_by:kribb upload_account_name:korea">
        <position start="31538" stop="30406"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31245" g_stop="31121" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="125" r_length="125" r_score="0.944"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31120" i_stop="30963" i_length="158">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30962" g_stop="30876" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="126" r_stop="212" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="30875" i_stop="30802" i_length="74">
            <donor d_prob="0.732" d_score="1.00"/>
            <acceptor a_prob="0.898" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="30801" g_stop="30706" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="213" r_stop="308" r_length="96" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0108P14.2" gen_strand="-" ref_id="SGN-E280044" ref_strand="-">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>308</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0108P14.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E280044" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="31245" e_stop="31121"/>
          <exon e_start="30962" e_stop="30876"/>
          <exon e_start="30801" e_stop="30706"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCATTTCGACGCCGTTTCAGCTCTCTTTGCCAACGAGTCCGATCACATGCCGTCGTTTCTCGACTTCAAATCCACCGATGTGCGCTTTTCCCTTCGCCGCCATTCTGTTTTCCTTATTTCTCAAGTAAATACTCTTCATAATTTTACACTGCTTTCGTCCTACTCGGTTTTGCATTTTCAGAGTTAAATTGAACTATGTTAACTTTTCTAAAAATCAAAATTATATCAATAGTATAGTAATTTGCAGTTAATTGTAGGTCTAACTGGTTGTGATTTTTGCAGGTACAAAGTTCTTACAAATTTGATGGCTATATTGCATACCTCGCCGTCAATTACATTGATCGTTTTCTCTCCAAACAAGCAGTTCTGGTAAACGGAGTTCATTTCATTCGTGTACTGAAATTGTAGAAAATCTTCTGAGAATTGTATGAAACTTACTTCAGGAGAATAAGCCATGGATTGTACGGATTCTCGTCATTGTTAGCCTTTCTCTTGCCGCAAAAATGAGGAACGTCGATTTATCACTGTCGGATATTCAG</genome_strand>
        <mrna_strand>GCACGAGCGACGCCGTTTCAGCTCTCTTTGCCAACGAGTCCGATCACATGCCGTCGTTTCTCGACTTCACATCCACCGATGTGCGCTTTTCCCTTCGCCGCCATTCTGTTTTCCTTATTTCTCAA..............................................................................................................................................................GTACAAAGTTCTTACAAATTTGATGGCTATATTGCATACCTCGCCGTCAATTACATTGATCGTTTTCTCTCCAAACAAGCAGTTCTG..........................................................................GAGAATAAGCCATGGATTGTACGGATTCTCGTCATTGTTAGCCTTTCTCTTGCCGCAAAAATGAGGAACGTCGATTTATCACTGACGGATATTCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>27</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="14184" PGL_stop="12982"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="14184" e_stop="12982"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.928"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.928">
            <gDNA_exon_boundary e_start="14184" e_stop="12982" e_length="1203"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14184" stop="13551"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E560302" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14161" stop="13439"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E407312" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13996" stop="13190"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E434158" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13996" stop="13314"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E404946" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13988" stop="13540"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E245054" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13955" stop="13267"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E405636" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13909" stop="13197"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E578941" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13695" stop="12982"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E379648" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13694" stop="13064"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E613008" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13627" stop="13046"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E408998" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATTATGGCTTCTCAAACTTGCAGCGTATTTTGGAATAAAATTTGTGATAGGCCTTCCGTTTGTAGTTGTATTTCTGGTGATCAAATTCAAAAGGAGGCATTTGTCGATGTATGATACGATTGAAGGGTTTTTACAATCACAAAATAATTTCATGCCAATCAGATATAATTACTCCCACATAAAGAGAATGACAAGAGGATTCAAAGAGAAATTAGGTGAGGGAGGTTATGGCAGTGTATACAAAGGAAAGCTTCAAAGTGGAAGGGATGTGGCAGTGAAGATGTTAAGCAAGCCTAAATCTGGTGGGCAAGATTTTATGAATGAAGTAGCTAGCATTGGAAGGATTCATCATGTCAATGTGGTTGGACTCGTGGGATATTGTGTGTTGAGGGAACTAAAGCGTGCTCTTGTATACGACTTCATGCCCAAATGGATCACTCGACAAGTATATTAGCATCAGTGAAGAAGGAAGTCCTCTGTTAAGTTGGCAGAGGAAGTATGACATTATTCTTGGAGTGGCTCGAGGAACTGGATATTTGCATCGAGGCTGTGATGTACAAATTTTGCATTTTGACATCAAACCACACAACATTCTTTTGGATGAGAATTTCATTCCAAAGATTTCTGACTTTGGGCTTGCAAAATTATATCCACCAGGTAATAGCATAGTGACTCTCACAGCTGCTCGAGGAACGATTGGCTATGTAGCTCCAGAGTTGATCAGCAGAAGCATCGGGGAAATCTCTTACAAAGCTGATGTTTACAGCTTTGGAATGCTGCTCATGGAAATGCTCGACTTGAAAAGACCTGAAGTTGCAAATGAAGAGAATTCCAGCCAATATTTTCCTTATTATATTTACGATAAGTTCAACAAGGGGAAGGAGATTGTGGTGGATGAAGAAGCAAATGATGATGAAAAGAAGATGGCTAGAAAGCTCGCTTTAGTTGCGTTATGGTGCATACAAACAAATCCGATACAACGCCCTTCGATGAGTAGAGTATTAGAAATGCTTGAAGGTGAAGTTGAAGTGCTAGAAGTACCTCCTCAGCCTCTTCAATCTCAACCGATTGTTCATCAGATCATGGGAAGTTCTATGACATTTTCTTCTGATTCAATGGCTTTGTTAGAAAATACGGCTGATAATCTCGTTGAAGTAGACATTTCTTCTGATTGACCATAGTTGATGTAATATTTATGTGAAA</gDNA_template>
            <first_frame> I  M  A  S  Q  T  C  S  V  F  W  N  K  I  C  D  R  P  S  V  C  S  C  I  S  G  D  Q  I  Q  K  E  A  F  V  D  V  *  Y  D  *  R  V  F  T  I  T  K  *  F  H  A  N  Q  I  *  L  L  P  H  K  E  N  D  K  R  I  Q  R  E  I  R  *  G  R  L  W  Q  C  I  Q  R  K  A  S  K  W  K  G  C  G  S  E  D  V  K  Q  A  *  I  W  W  A  R  F  Y  E  *  S  S  *  H  W  K  D  S  S  C  Q  C  G  W  T  R  G  I  L  C  V  E  G  T  K  A  C  S  C  I  R  L  H  A  Q  M  D  H  S  T  S  I  L  A  S  V  K  K  E  V  L  C  *  V  G  R  G  S  M  T  L  F  L  E  W  L  E  E  L  D  I  C  I  E  A  V  M  Y  K  F  C  I  L  T  S  N  H  T  T  F  F  W  M  R  I  S  F  Q  R  F  L  T  L  G  L  Q  N  Y  I  H  Q  V  I  A  *  *  L  S  Q  L  L  E  E  R  L  A  M  *  L  Q  S  *  S  A  E  A  S  G  K  S  L  T  K  L  M  F  T  A  L  E  C  C  S  W  K  C  S  T  *  K  D  L  K  L  Q  M  K  R  I  P  A  N  I  F  L  I  I  F  T  I  S  S  T  R  G  R  R  L  W  W  M  K  K  Q  M  M  M  K  R  R  W  L  E  S  S  L  *  L  R  Y  G  A  Y  K  Q  I  R  Y  N  A  L  R  *  V  E  Y  *  K  C  L  K  V  K  L  K  C  *  K  Y  L  L  S  L  F  N  L  N  R  L  F  I  R  S  W  E  V  L  *  H  F  L  L  I  Q  W  L  C  *  K  I  R  L  I  I  S  L  K  *  T  F  L  L  I  D  H  S  *  C  N  I  Y  V  K </first_frame>
            <second_frame>  L  W  L  L  K  L  A  A  Y  F  G  I  K  F  V  I  G  L  P  F  V  V  V  F  L  V  I  K  F  K  R  R  H  L  S  M  Y  D  T  I  E  G  F  L  Q  S  Q  N  N  F  M  P  I  R  Y  N  Y  S  H  I  K  R  M  T  R  G  F  K  E  K  L  G  E  G  G  Y  G  S  V  Y  K  G  K  L  Q  S  G  R  D  V  A  V  K  M  L  S  K  P  K  S  G  G  Q  D  F  M  N  E  V  A  S  I  G  R  I  H  H  V  N  V  V  G  L  V  G  Y  C  V  L  R  E  L  K  R  A  L  V  Y  D  F  M  P  K  W  I  T  R  Q  V  Y  *  H  Q  *  R  R  K  S  S  V  K  L  A  E  E  V  *  H  Y  S  W  S  G  S  R  N  W  I  F  A  S  R  L  *  C  T  N  F  A  F  *  H  Q  T  T  Q  H  S  F  G  *  E  F  H  S  K  D  F  *  L  W  A  C  K  I  I  S  T  R  *  *  H  S  D  S  H  S  C  S  R  N  D  W  L  C  S  S  R  V  D  Q  Q  K  H  R  G  N  L  L  Q  S  *  C  L  Q  L  W  N  A  A  H  G  N  A  R  L  E  K  T  *  S  C  K  *  R  E  F  Q  P  I  F  S  L  L  Y  L  R  *  V  Q  Q  G  E  G  D  C  G  G  *  R  S  K  *  *  *  K  E  D  G  *  K  A  R  F  S  C  V  M  V  H  T  N  K  S  D  T  T  P  F  D  E  *  S  I  R  N  A  *  R  *  S  *  S  A  R  S  T  S  S  A  S  S  I  S  T  D  C  S  S  D  H  G  K  F  Y  D  I  F  F  *  F  N  G  F  V  R  K  Y  G  *  *  S  R  *  S  R  H  F  F  *  L  T  I  V  D  V  I  F  M  *   </second_frame>
            <third_frame>   Y  G  F  S  N  L  Q  R  I  L  E  *  N  L  *  *  A  F  R  L  *  L  Y  F  W  *  S  N  S  K  G  G  I  C  R  C  M  I  R  L  K  G  F  Y  N  H  K  I  I  S  C  Q  S  D  I  I  T  P  T  *  R  E  *  Q  E  D  S  K  R  N  *  V  R  E  V  M  A  V  Y  T  K  E  S  F  K  V  E  G  M  W  Q  *  R  C  *  A  S  L  N  L  V  G  K  I  L  *  M  K  *  L  A  L  E  G  F  I  M  S  M  W  L  D  S  W  D  I  V  C  *  G  N  *  S  V  L  L  Y  T  T  S  C  P  N  G  S  L  D  K  Y  I  S  I  S  E  E  G  S  P  L  L  S  W  Q  R  K  Y  D  I  I  L  G  V  A  R  G  T  G  Y  L  H  R  G  C  D  V  Q  I  L  H  F  D  I  K  P  H  N  I  L  L  D  E  N  F  I  P  K  I  S  D  F  G  L  A  K  L  Y  P  P  G  N  S  I  V  T  L  T  A  A  R  G  T  I  G  Y  V  A  P  E  L  I  S  R  S  I  G  E  I  S  Y  K  A  D  V  Y  S  F  G  M  L  L  M  E  M  L  D  L  K  R  P  E  V  A  N  E  E  N  S  S  Q  Y  F  P  Y  Y  I  Y  D  K  F  N  K  G  K  E  I  V  V  D  E  E  A  N  D  D  E  K  K  M  A  R  K  L  A  L  V  A  L  W  C  I  Q  T  N  P  I  Q  R  P  S  M  S  R  V  L  E  M  L  E  G  E  V  E  V  L  E  V  P  P  Q  P  L  Q  S  Q  P  I  V  H  Q  I  M  G  S  S  M  T  F  S  S  D  S  M  A  L  L  E  N  T  A  D  N  L  V  E  V  D  I  S  S  D  *  P  *  L  M  *  Y  L  C  E  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0108P14.2" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="13786" stop="13010"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>774</number_coding_nucleotides>
                  <number_encoded_amino_acids>258</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SVLLYTTSCPNGSLDKYISISEEGSPLLSWQRKYDIILGVARGTGYLHRGCDVQILHFDIKPHNILLDENFIPKISDFGLAKLYPPGNSIVTLTAARGTIGYVAPELISRSIGEISYKADVYSFGMLLMEMLDLKRPEVANEENSSQYFPYYIYDKFNKGKEIVVDEEANDDEKKMARKLALVALWCIQTNPIQRPSMSRVLEMLEGEVEVLEVPPQPLQSQPIVHQIMGSSMTFSSDSMALLENTADNLVEVDISSD*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="19307" PGL_stop="16662"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="18679" e_stop="18567"/>
            <exon e_start="18468" e_stop="18231"/>
            <exon e_start="18144" e_stop="17994"/>
            <exon e_start="17903" e_stop="17281"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.955" e_score="0.965"/>
          <exon-intron don_prob="0.975" acc_prob="0.994" e_score="0.958"/>
          <exon-intron don_prob="0.961" acc_prob="0.908" e_score="1.000"/>
          <exon-only e_score="0.979"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.965">
            <gDNA_exon_boundary e_start="18679" e_stop="18567" e_length="113"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.955">
            <gDNA_intron_boundary i_start="18566" i_stop="18469" i_length="98"/>
          </intron>
          <exon e_serial="2" e_score="0.958">
            <gDNA_exon_boundary e_start="18468" e_stop="18231" e_length="238"/>
          </exon>
          <intron i_serial="2" don_prob="0.975" acc_prob="0.994">
            <gDNA_intron_boundary i_start="18230" i_stop="18145" i_length="86"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="18144" e_stop="17994" e_length="151"/>
          </exon>
          <intron i_serial="3" don_prob="0.961" acc_prob="0.908">
            <gDNA_intron_boundary i_start="17993" i_stop="17904" i_length="90"/>
          </intron>
          <exon e_serial="4" e_score="0.979">
            <gDNA_exon_boundary e_start="17903" e_stop="17281" e_length="623"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18679" stop="18567"/>
              <exon start="18468" stop="18231"/>
              <exon start="18144" stop="17994"/>
              <exon start="17903" stop="17846"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E233778" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18401" stop="18231"/>
              <exon start="18144" stop="17994"/>
              <exon start="17903" stop="17557"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E396658" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18400" stop="18231"/>
              <exon start="18144" stop="17994"/>
              <exon start="17903" stop="17645"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E231230" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18324" stop="18231"/>
              <exon start="18144" stop="17994"/>
              <exon start="17903" stop="17321"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E711751" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17712" stop="17385"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220662" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17553" stop="17281"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353554" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAGGCTTCAACACAGAAATCTAGTCCGGCTTCTTGGCTGTTGTGTTGATATGGAAGAGAAGATGCTGATCTATGAATACCTGGAGAATAAAAGTTTAGATTCAATTTTGTTCA : ATAAACAGAAAAGCTCGCTGCTCGACTGGCAAAAGCGGTTCAATATTATTTGTGGGATTGCTCGGGGGCTTCTATACCTTCATCAAGATTCAAGATTTAGGATTATCCATAGAGACCTTAAAGCAAGCAATATTCTGCTTGATAAGGATTTGACCCCCAAAATATCAGATTTTGGCATGGCAAGAATTTTTGGCGGAGATGAGACTGAAGGAAATACCAAAAGAGTAGTTGGAACCTA : TGGTTACATGTCTCCGGAATATGCAATGGATGGCCTCTTCTCTGTTAAGTCCGATGTTTTCAGCTTTGGGGTTTTGGTGTTAGAAATAGTAACCGGAAAGAAGAACAGGGGATTCTATTATCAAAATAACCAACTCAACCTTCTTGGACAT : GCGTGGAGACTCTGGAAAGAAGGGAGCGGCTCAGAGCTACTAGATCCATCTTTTGGAGAATCTTTTTCTCCATCTGAAGTAATGAGATGCATACAGGTTGGACTGTTGTGTGTCCAGGAACAAGCAGAAGACCGACCAAACATGGCCACTGTGGTTTTGATGCTAGGTAGCGAAAGTGCATCACTTCCTCAGCCTAAAAACCCAGGATTTTGCCTTGGAAGAAGACCCGTTGATTCTGATTCATATTCGACTAATTATGAAGAAACTTGCACTGTCAATCAAGTTACAGTTACCATGATAGATCCCCGGTAGTTGATGGTATCGCCCTCAGAAAGTGTGTATATTACTACAAGAGGTTCACAATTTTCTCTTGTATACTATCTCAGTTTTTGTTTTTGGGTAAGTTTTGTGAAAGATAAAGAGCATAATTAGGTCTTTTTTTCTCATTACATACAATTTGTGAATTCAAAATCTTGTCTTTTTTCATCATCAATGTAATAGGCCAATCATTCCTTTTCCATATCCTTCTAAATTACTGTGTCATTATTGATGTGATTCAGAAGGAATATCTTGTGCATTCATCTTCATTTCTACTAAATAAAATTTAAACTTTTGGTCTTTTC</gDNA_template>
            <first_frame> Q  A  S  T  Q  K  S  S  P  A  S  W  L  L  C  *  Y  G  R  E  D  A  D  L  *  I  P  G  E  *  K  F  R  F  N  F  V  Q :   *  T  E  K  L  A  A  R  L  A  K  A  V  Q  Y  Y  L  W  D  C  S  G  A  S  I  P  S  S  R  F  K  I  *  D  Y  P  *  R  P  *  S  K  Q  Y  S  A  *  *  G  F  D  P  Q  N  I  R  F  W  H  G  K  N  F  W  R  R  *  D  *  R  K  Y  Q  K  S  S  W  N  L  :  W  L  H  V  S  G  I  C  N  G  W  P  L  L  C  *  V  R  C  F  Q  L  W  G  F  G  V  R  N  S  N  R  K  E  E  Q  G  I  L  L  S  K  *  P  T  Q  P  S  W  T   : C  V  E  T  L  E  R  R  E  R  L  R  A  T  R  S  I  F  W  R  I  F  F  S  I  *  S  N  E  M  H  T  G  W  T  V  V  C  P  G  T  S  R  R  P  T  K  H  G  H  C  G  F  D  A  R  *  R  K  C  I  T  S  S  A  *  K  P  R  I  L  P  W  K  K  T  R  *  F  *  F  I  F  D  *  L  *  R  N  L  H  C  Q  S  S  Y  S  Y  H  D  R  S  P  V  V  D  G  I  A  L  R  K  C  V  Y  Y  Y  K  R  F  T  I  F  S  C  I  L  S  Q  F  L  F  L  G  K  F  C  E  R  *  R  A  *  L  G  L  F  F  S  L  H  T  I  C  E  F  K  I  L  S  F  F  I  I  N  V  I  G  Q  S  F  L  F  H  I  L  L  N  Y  C  V  I  I  D  V  I  Q  K  E  Y  L  V  H  S  S  S  F  L  L  N  K  I  *  T  F  G  L  F </first_frame>
            <second_frame>  R  L  Q  H  R  N  L  V  R  L  L  G  C  C  V  D  M  E  E  K  M  L  I  Y  E  Y  L  E  N  K  S  L  D  S  I  L  F   : N  K  Q  K  S  S  L  L  D  W  Q  K  R  F  N  I  I  C  G  I  A  R  G  L  L  Y  L  H  Q  D  S  R  F  R  I  I  H  R  D  L  K  A  S  N  I  L  L  D  K  D  L  T  P  K  I  S  D  F  G  M  A  R  I  F  G  G  D  E  T  E  G  N  T  K  R  V  V  G  T  Y :   G  Y  M  S  P  E  Y  A  M  D  G  L  F  S  V  K  S  D  V  F  S  F  G  V  L  V  L  E  I  V  T  G  K  K  N  R  G  F  Y  Y  Q  N  N  Q  L  N  L  L  G  H  :  A  W  R  L  W  K  E  G  S  G  S  E  L  L  D  P  S  F  G  E  S  F  S  P  S  E  V  M  R  C  I  Q  V  G  L  L  C  V  Q  E  Q  A  E  D  R  P  N  M  A  T  V  V  L  M  L  G  S  E  S  A  S  L  P  Q  P  K  N  P  G  F  C  L  G  R  R  P  V  D  S  D  S  Y  S  T  N  Y  E  E  T  C  T  V  N  Q  V  T  V  T  M  I  D  P  R  *  L  M  V  S  P  S  E  S  V  Y  I  T  T  R  G  S  Q  F  S  L  V  Y  Y  L  S  F  C  F  W  V  S  F  V  K  D  K  E  H  N  *  V  F  F  S  H  Y  I  Q  F  V  N  S  K  S  C  L  F  S  S  S  M  *  *  A  N  H  S  F  S  I  S  F  *  I  T  V  S  L  L  M  *  F  R  R  N  I  L  C  I  H  L  H  F  Y  *  I  K  F  K  L  L  V  F   </second_frame>
            <third_frame>   G  F  N  T  E  I  *  S  G  F  L  A  V  V  L  I  W  K  R  R  C  *  S  M  N  T  W  R  I  K  V  *  I  Q  F  C  S  :  I  N  R  K  A  R  C  S  T  G  K  S  G  S  I  L  F  V  G  L  L  G  G  F  Y  T  F  I  K  I  Q  D  L  G  L  S  I  E  T  L  K  Q  A  I  F  C  L  I  R  I  *  P  P  K  Y  Q  I  L  A  W  Q  E  F  L  A  E  M  R  L  K  E  I  P  K  E  *  L  E  P   : M  V  T  C  L  R  N  M  Q  W  M  A  S  S  L  L  S  P  M  F  S  A  L  G  F  W  C  *  K  *  *  P  E  R  R  T  G  D  S  I  I  K  I  T  N  S  T  F  L  D  M :   R  G  D  S  G  K  K  G  A  A  Q  S  Y  *  I  H  L  L  E  N  L  F  L  H  L  K  *  *  D  A  Y  R  L  D  C  C  V  S  R  N  K  Q  K  T  D  Q  T  W  P  L  W  F  *  C  *  V  A  K  V  H  H  F  L  S  L  K  T  Q  D  F  A  L  E  E  D  P  L  I  L  I  H  I  R  L  I  M  K  K  L  A  L  S  I  K  L  Q  L  P  *  *  I  P  G  S  *  W  Y  R  P  Q  K  V  C  I  L  L  Q  E  V  H  N  F  L  L  Y  T  I  S  V  F  V  F  G  *  V  L  *  K  I  K  S  I  I  R  S  F  F  L  I  T  Y  N  L  *  I  Q  N  L  V  F  F  H  H  Q  C  N  R  P  I  I  P  F  P  Y  P  S  K  L  L  C  H  Y  *  C  D  S  E  G  I  S  C  A  F  I  F  I  S  T  K  *  N  L  N  F  W  S  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0108P14.2" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="18678" stop="18567"/>
                    <exon start="18468" stop="18231"/>
                    <exon start="18144" stop="17994"/>
                    <exon start="17903" stop="17592"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>810</number_coding_nucleotides>
                  <number_encoded_amino_acids>270</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RLQHRNLVRLLGCCVDMEEKMLIYEYLENKSLDSILFNKQKSSLLDWQKRFNIICGIARGLLYLHQDSRFRIIHRDLKASNILLDKDLTPKISDFGMARIFGGDETEGNTKRVVGTYGYMSPEYAMDGLFSVKSDVFSFGVLVLEIVTGKKNRGFYYQNNQLNLLGHAWRLWKEGSGSELLDPSFGESFSPSEVMRCIQVGLLCVQEQAEDRPNMATVVLMLGSESASLPQPKNPGFCLGRRPVDSDSYSTNYEETCTVNQVTVTMIDPR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="19307" e_stop="19139"/>
            <exon e_start="19050" e_stop="18874"/>
            <exon e_start="18641" e_stop="18567"/>
            <exon e_start="18468" e_stop="18231"/>
            <exon e_start="18144" e_stop="17994"/>
            <exon e_start="17903" e_stop="17281"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.694" e_score="0.988"/>
          <exon-intron don_prob="0.434" acc_prob="0.000" e_score="0.977"/>
          <exon-intron don_prob="0.000" acc_prob="0.955" e_score="0.987"/>
          <exon-intron don_prob="0.975" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.961" acc_prob="0.908" e_score="1.000"/>
          <exon-only e_score="0.979"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.988">
            <gDNA_exon_boundary e_start="19307" e_stop="19139" e_length="169"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.694">
            <gDNA_intron_boundary i_start="19138" i_stop="19051" i_length="88"/>
          </intron>
          <exon e_serial="2" e_score="0.977">
            <gDNA_exon_boundary e_start="19050" e_stop="18874" e_length="177"/>
          </exon>
          <intron i_serial="2" don_prob="0.434" acc_prob="0.000">
            <gDNA_intron_boundary i_start="18873" i_stop="18642" i_length="232"/>
          </intron>
          <exon e_serial="3" e_score="0.987">
            <gDNA_exon_boundary e_start="18641" e_stop="18567" e_length="75"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.955">
            <gDNA_intron_boundary i_start="18566" i_stop="18469" i_length="98"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="18468" e_stop="18231" e_length="238"/>
          </exon>
          <intron i_serial="4" don_prob="0.975" acc_prob="0.994">
            <gDNA_intron_boundary i_start="18230" i_stop="18145" i_length="86"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="18144" e_stop="17994" e_length="151"/>
          </exon>
          <intron i_serial="5" don_prob="0.961" acc_prob="0.908">
            <gDNA_intron_boundary i_start="17993" i_stop="17904" i_length="90"/>
          </intron>
          <exon e_serial="6" e_score="0.979">
            <gDNA_exon_boundary e_start="17903" e_stop="17281" e_length="623"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19307" stop="19139"/>
              <exon start="19050" stop="18874"/>
              <exon start="18641" stop="18567"/>
              <exon start="18468" stop="18373"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310509" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18401" stop="18231"/>
              <exon start="18144" stop="17994"/>
              <exon start="17903" stop="17557"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E396658" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18400" stop="18231"/>
              <exon start="18144" stop="17994"/>
              <exon start="17903" stop="17645"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E231230" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18324" stop="18231"/>
              <exon start="18144" stop="17994"/>
              <exon start="17903" stop="17321"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E711751" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17712" stop="17385"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220662" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17553" stop="17281"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353554" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAAATTGGAGGTGAAGGATCTGGAAATAGTTCTCGCAAGACAAAAATAGTTGCAATAGCTGCTGGGGTTACAGTTGGTATAGCTCTTGTGTTATTTGGACTAACCCTTTGCATCTTATCAAAGAGAAGAAAACATCAAAGTTCAATCCGAACTAAATCCGTGAACAGAG : GCACTAGCGAACGAAGTCAAGAGCTTTTGATGAATGCAACTATTATTCCAAGTAAAAGAGAATTTTCTGGTGAAACTTCCACGGAAGAGTTTGAATTGCCATTGTTTGATTACAGTACCCTAGCTACGGCAACAGAAAATTTTTCTGACGCGACTAAGTTGGGCCAAGGTGGCTTTG : GTTGTGTTGATATGGAAGAGAAGATGCTGATCTATGAATACCTGGAGAATAAAAGTTTAGATTCAATTTTGTTCA : ATAAACAGAAAAGCTCGCTGCTCGACTGGCAAAAGCGGTTCAATATTATTTGTGGGATTGCTCGGGGGCTTCTATACCTTCATCAAGATTCAAGATTTAGGATTATCCATAGAGACCTTAAAGCAAGCAATATTCTGCTTGATAAGGATTTGACCCCCAAAATATCAGATTTTGGCATGGCAAGAATTTTTGGCGGAGATGAGACTGAAGGAAATACCAAAAGAGTAGTTGGAACCTA : TGGTTACATGTCTCCGGAATATGCAATGGATGGCCTCTTCTCTGTTAAGTCCGATGTTTTCAGCTTTGGGGTTTTGGTGTTAGAAATAGTAACCGGAAAGAAGAACAGGGGATTCTATTATCAAAATAACCAACTCAACCTTCTTGGACAT : GCGTGGAGACTCTGGAAAGAAGGGAGCGGCTCAGAGCTACTAGATCCATCTTTTGGAGAATCTTTTTCTCCATCTGAAGTAATGAGATGCATACAGGTTGGACTGTTGTGTGTCCAGGAACAAGCAGAAGACCGACCAAACATGGCCACTGTGGTTTTGATGCTAGGTAGCGAAAGTGCATCACTTCCTCAGCCTAAAAACCCAGGATTTTGCCTTGGAAGAAGACCCGTTGATTCTGATTCATATTCGACTAATTATGAAGAAACTTGCACTGTCAATCAAGTTACAGTTACCATGATAGATCCCCGGTAGTTGATGGTATCGCCCTCAGAAAGTGTGTATATTACTACAAGAGGTTCACAATTTTCTCTTGTATACTATCTCAGTTTTTGTTTTTGGGTAAGTTTTGTGAAAGATAAAGAGCATAATTAGGTCTTTTTTTCTCATTACATACAATTTGTGAATTCAAAATCTTGTCTTTTTTCATCATCAATGTAATAGGCCAATCATTCCTTTTCCATATCCTTCTAAATTACTGTGTCATTATTGATGTGATTCAGAAGGAATATCTTGTGCATTCATCTTCATTTCTACTAAATAAAATTTAAACTTTTGGTCTTTTC</gDNA_template>
            <first_frame> Q  I  G  G  E  G  S  G  N  S  S  R  K  T  K  I  V  A  I  A  A  G  V  T  V  G  I  A  L  V  L  F  G  L  T  L  C  I  L  S  K  R  R  K  H  Q  S  S  I  R  T  K  S  V  N  R   : G  T  S  E  R  S  Q  E  L  L  M  N  A  T  I  I  P  S  K  R  E  F  S  G  E  T  S  T  E  E  F  E  L  P  L  F  D  Y  S  T  L  A  T  A  T  E  N  F  S  D  A  T  K  L  G  Q  G  G  F   : G  C  V  D  M  E  E  K  M  L  I  Y  E  Y  L  E  N  K  S  L  D  S  I  L  F   : N  K  Q  K  S  S  L  L  D  W  Q  K  R  F  N  I  I  C  G  I  A  R  G  L  L  Y  L  H  Q  D  S  R  F  R  I  I  H  R  D  L  K  A  S  N  I  L  L  D  K  D  L  T  P  K  I  S  D  F  G  M  A  R  I  F  G  G  D  E  T  E  G  N  T  K  R  V  V  G  T  Y :   G  Y  M  S  P  E  Y  A  M  D  G  L  F  S  V  K  S  D  V  F  S  F  G  V  L  V  L  E  I  V  T  G  K  K  N  R  G  F  Y  Y  Q  N  N  Q  L  N  L  L  G  H  :  A  W  R  L  W  K  E  G  S  G  S  E  L  L  D  P  S  F  G  E  S  F  S  P  S  E  V  M  R  C  I  Q  V  G  L  L  C  V  Q  E  Q  A  E  D  R  P  N  M  A  T  V  V  L  M  L  G  S  E  S  A  S  L  P  Q  P  K  N  P  G  F  C  L  G  R  R  P  V  D  S  D  S  Y  S  T  N  Y  E  E  T  C  T  V  N  Q  V  T  V  T  M  I  D  P  R  *  L  M  V  S  P  S  E  S  V  Y  I  T  T  R  G  S  Q  F  S  L  V  Y  Y  L  S  F  C  F  W  V  S  F  V  K  D  K  E  H  N  *  V  F  F  S  H  Y  I  Q  F  V  N  S  K  S  C  L  F  S  S  S  M  *  *  A  N  H  S  F  S  I  S  F  *  I  T  V  S  L  L  M  *  F  R  R  N  I  L  C  I  H  L  H  F  Y  *  I  K  F  K  L  L  V  F   </first_frame>
            <second_frame>  K  L  E  V  K  D  L  E  I  V  L  A  R  Q  K  *  L  Q  *  L  L  G  L  Q  L  V  *  L  L  C  Y  L  D  *  P  F  A  S  Y  Q  R  E  E  N  I  K  V  Q  S  E  L  N  P  *  T  E  :  A  L  A  N  E  V  K  S  F  *  *  M  Q  L  L  F  Q  V  K  E  N  F  L  V  K  L  P  R  K  S  L  N  C  H  C  L  I  T  V  P  *  L  R  Q  Q  K  I  F  L  T  R  L  S  W  A  K  V  A  L  :  V  V  L  I  W  K  R  R  C  *  S  M  N  T  W  R  I  K  V  *  I  Q  F  C  S  :  I  N  R  K  A  R  C  S  T  G  K  S  G  S  I  L  F  V  G  L  L  G  G  F  Y  T  F  I  K  I  Q  D  L  G  L  S  I  E  T  L  K  Q  A  I  F  C  L  I  R  I  *  P  P  K  Y  Q  I  L  A  W  Q  E  F  L  A  E  M  R  L  K  E  I  P  K  E  *  L  E  P   : M  V  T  C  L  R  N  M  Q  W  M  A  S  S  L  L  S  P  M  F  S  A  L  G  F  W  C  *  K  *  *  P  E  R  R  T  G  D  S  I  I  K  I  T  N  S  T  F  L  D  M :   R  G  D  S  G  K  K  G  A  A  Q  S  Y  *  I  H  L  L  E  N  L  F  L  H  L  K  *  *  D  A  Y  R  L  D  C  C  V  S  R  N  K  Q  K  T  D  Q  T  W  P  L  W  F  *  C  *  V  A  K  V  H  H  F  L  S  L  K  T  Q  D  F  A  L  E  E  D  P  L  I  L  I  H  I  R  L  I  M  K  K  L  A  L  S  I  K  L  Q  L  P  *  *  I  P  G  S  *  W  Y  R  P  Q  K  V  C  I  L  L  Q  E  V  H  N  F  L  L  Y  T  I  S  V  F  V  F  G  *  V  L  *  K  I  K  S  I  I  R  S  F  F  L  I  T  Y  N  L  *  I  Q  N  L  V  F  F  H  H  Q  C  N  R  P  I  I  P  F  P  Y  P  S  K  L  L  C  H  Y  *  C  D  S  E  G  I  S  C  A  F  I  F  I  S  T  K  *  N  L  N  F  W  S  F  </second_frame>
            <third_frame>   N  W  R  *  R  I  W  K  *  F  S  Q  D  K  N  S  C  N  S  C  W  G  Y  S  W  Y  S  S  C  V  I  W  T  N  P  L  H  L  I  K  E  K  K  T  S  K  F  N  P  N  *  I  R  E  Q  R :   H  *  R  T  K  S  R  A  F  D  E  C  N  Y  Y  S  K  *  K  R  I  F  W  *  N  F  H  G  R  V  *  I  A  I  V  *  L  Q  Y  P  S  Y  G  N  R  K  F  F  *  R  D  *  V  G  P  R  W  L  W :   L  C  *  Y  G  R  E  D  A  D  L  *  I  P  G  E  *  K  F  R  F  N  F  V  Q :   *  T  E  K  L  A  A  R  L  A  K  A  V  Q  Y  Y  L  W  D  C  S  G  A  S  I  P  S  S  R  F  K  I  *  D  Y  P  *  R  P  *  S  K  Q  Y  S  A  *  *  G  F  D  P  Q  N  I  R  F  W  H  G  K  N  F  W  R  R  *  D  *  R  K  Y  Q  K  S  S  W  N  L  :  W  L  H  V  S  G  I  C  N  G  W  P  L  L  C  *  V  R  C  F  Q  L  W  G  F  G  V  R  N  S  N  R  K  E  E  Q  G  I  L  L  S  K  *  P  T  Q  P  S  W  T   : C  V  E  T  L  E  R  R  E  R  L  R  A  T  R  S  I  F  W  R  I  F  F  S  I  *  S  N  E  M  H  T  G  W  T  V  V  C  P  G  T  S  R  R  P  T  K  H  G  H  C  G  F  D  A  R  *  R  K  C  I  T  S  S  A  *  K  P  R  I  L  P  W  K  K  T  R  *  F  *  F  I  F  D  *  L  *  R  N  L  H  C  Q  S  S  Y  S  Y  H  D  R  S  P  V  V  D  G  I  A  L  R  K  C  V  Y  Y  Y  K  R  F  T  I  F  S  C  I  L  S  Q  F  L  F  L  G  K  F  C  E  R  *  R  A  *  L  G  L  F  F  S  L  H  T  I  C  E  F  K  I  L  S  F  F  I  I  N  V  I  G  Q  S  F  L  F  H  I  L  L  N  Y  C  V  I  I  D  V  I  Q  K  E  Y  L  V  H  S  S  S  F  L  L  N  K  I  *  T  F  G  L  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0108P14.2" strand="-"/>
                <serials PGL_serial="2" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="19307" stop="19139"/>
                    <exon start="19050" stop="18874"/>
                    <exon start="18641" stop="18567"/>
                    <exon start="18468" stop="18231"/>
                    <exon start="18144" stop="17994"/>
                    <exon start="17903" stop="17592"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1119</number_coding_nucleotides>
                  <number_encoded_amino_acids>373</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QIGGEGSGNSSRKTKIVAIAAGVTVGIALVLFGLTLCILSKRRKHQSSIRTKSVNRGTSERSQELLMNATIIPSKREFSGETSTEEFELPLFDYSTLATATENFSDATKLGQGGFGCVDMEEKMLIYEYLENKSLDSILFNKQKSSLLDWQKRFNIICGIARGLLYLHQDSRFRIIHRDLKASNILLDKDLTPKISDFGMARIFGGDETEGNTKRVVGTYGYMSPEYAMDGLFSVKSDVFSFGVLVLEIVTGKKNRGFYYQNNQLNLLGHAWRLWKEGSGSELLDPSFGESFSPSEVMRCIQVGLLCVQEQAEDRPNMATVVLMLGSESASLPQPKNPGFCLGRRPVDSDSYSTNYEETCTVNQVTVTMIDPR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="18679" e_stop="18567"/>
            <exon e_start="18468" e_stop="18231"/>
            <exon e_start="18144" e_stop="17994"/>
            <exon e_start="17903" e_stop="17373"/>
            <exon e_start="16871" e_stop="16855"/>
            <exon e_start="16679" e_stop="16662"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.955" e_score="0.965"/>
          <exon-intron don_prob="0.975" acc_prob="0.994" e_score="0.958"/>
          <exon-intron don_prob="0.961" acc_prob="0.908" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.951"/>
          <exon-intron don_prob="0.468" acc_prob="0.921" e_score="0.765"/>
          <exon-only e_score="0.778"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.965">
            <gDNA_exon_boundary e_start="18679" e_stop="18567" e_length="113"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.955">
            <gDNA_intron_boundary i_start="18566" i_stop="18469" i_length="98"/>
          </intron>
          <exon e_serial="2" e_score="0.958">
            <gDNA_exon_boundary e_start="18468" e_stop="18231" e_length="238"/>
          </exon>
          <intron i_serial="2" don_prob="0.975" acc_prob="0.994">
            <gDNA_intron_boundary i_start="18230" i_stop="18145" i_length="86"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="18144" e_stop="17994" e_length="151"/>
          </exon>
          <intron i_serial="3" don_prob="0.961" acc_prob="0.908">
            <gDNA_intron_boundary i_start="17993" i_stop="17904" i_length="90"/>
          </intron>
          <exon e_serial="4" e_score="0.951">
            <gDNA_exon_boundary e_start="17903" e_stop="17373" e_length="531"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="17372" i_stop="16872" i_length="501"/>
          </intron>
          <exon e_serial="5" e_score="0.765">
            <gDNA_exon_boundary e_start="16871" e_stop="16855" e_length="17"/>
          </exon>
          <intron i_serial="5" don_prob="0.468" acc_prob="0.921">
            <gDNA_intron_boundary i_start="16854" i_stop="16680" i_length="175"/>
          </intron>
          <exon e_serial="6" e_score="0.778">
            <gDNA_exon_boundary e_start="16679" e_stop="16662" e_length="18"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18679" stop="18567"/>
              <exon start="18468" stop="18231"/>
              <exon start="18144" stop="17994"/>
              <exon start="17903" stop="17846"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E233778" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18401" stop="18231"/>
              <exon start="18144" stop="17994"/>
              <exon start="17903" stop="17557"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E396658" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18400" stop="18231"/>
              <exon start="18144" stop="17994"/>
              <exon start="17903" stop="17645"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E231230" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18108" stop="17994"/>
              <exon start="17903" stop="17373"/>
              <exon start="16871" stop="16855"/>
              <exon start="16679" stop="16662"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E396806" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17712" stop="17385"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220662" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAGGCTTCAACACAGAAATCTAGTCCGGCTTCTTGGCTGTTGTGTTGATATGGAAGAGAAGATGCTGATCTATGAATACCTGGAGAATAAAAGTTTAGATTCAATTTTGTTCA : ATAAACAGAAAAGCTCGCTGCTCGACTGGCAAAAGCGGTTCAATATTATTTGTGGGATTGCTCGGGGGCTTCTATACCTTCATCAAGATTCAAGATTTAGGATTATCCATAGAGACCTTAAAGCAAGCAATATTCTGCTTGATAAGGATTTGACCCCCAAAATATCAGATTTTGGCATGGCAAGAATTTTTGGCGGAGATGAGACTGAAGGAAATACCAAAAGAGTAGTTGGAACCTA : TGGTTACATGTCTCCGGAATATGCAATGGATGGCCTCTTCTCTGTTAAGTCCGATGTTTTCAGCTTTGGGGTTTTGGTGTTAGAAATAGTAACCGGAAAGAAGAACAGGGGATTCTATTATCAAAATAACCAACTCAACCTTCTTGGACAT : GCGTGGAGACTCTGGAAAGAAGGGAGCGGCTCAGAGCTACTAGATCCATCTTTTGGAGAATCTTTTTCTCCATCTGAAGTAATGAGATGCATACAGGTTGGACTGTTGTGTGTCCAGGAACAAGCAGAAGACCGACCAAACATGGCCACTGTGGTTTTGATGCTAGGTAGCGAAAGTGCATCACTTCCTCAGCCTAAAAACCCAGGATTTTGCCTTGGAAGAAGACCCGTTGATTCTGATTCATATTCGACTAATTATGAAGAAACTTGCACTGTCAATCAAGTTACAGTTACCATGATAGATCCCCGGTAGTTGATGGTATCGCCCTCAGAAAGTGTGTATATTACTACAAGAGGTTCACAATTTTCTCTTGTATACTATCTCAGTTTTTGTTTTTGGGTAAGTTTTGTGAAAGATAAAGAGCATAATTAGGTCTTTTTTTCTCATTACATACAATTTGTGAATTCAAAATCTTGTCTTTTTTCATCATCAATGTAATAGGCCAATCATTCCTTTTCCATATCCTTCTAA : AACAGAATAAAGAAAAA : TAACAAAATAAAAGAAAA</gDNA_template>
            <first_frame> Q  A  S  T  Q  K  S  S  P  A  S  W  L  L  C  *  Y  G  R  E  D  A  D  L  *  I  P  G  E  *  K  F  R  F  N  F  V  Q :   *  T  E  K  L  A  A  R  L  A  K  A  V  Q  Y  Y  L  W  D  C  S  G  A  S  I  P  S  S  R  F  K  I  *  D  Y  P  *  R  P  *  S  K  Q  Y  S  A  *  *  G  F  D  P  Q  N  I  R  F  W  H  G  K  N  F  W  R  R  *  D  *  R  K  Y  Q  K  S  S  W  N  L  :  W  L  H  V  S  G  I  C  N  G  W  P  L  L  C  *  V  R  C  F  Q  L  W  G  F  G  V  R  N  S  N  R  K  E  E  Q  G  I  L  L  S  K  *  P  T  Q  P  S  W  T   : C  V  E  T  L  E  R  R  E  R  L  R  A  T  R  S  I  F  W  R  I  F  F  S  I  *  S  N  E  M  H  T  G  W  T  V  V  C  P  G  T  S  R  R  P  T  K  H  G  H  C  G  F  D  A  R  *  R  K  C  I  T  S  S  A  *  K  P  R  I  L  P  W  K  K  T  R  *  F  *  F  I  F  D  *  L  *  R  N  L  H  C  Q  S  S  Y  S  Y  H  D  R  S  P  V  V  D  G  I  A  L  R  K  C  V  Y  Y  Y  K  R  F  T  I  F  S  C  I  L  S  Q  F  L  F  L  G  K  F  C  E  R  *  R  A  *  L  G  L  F  F  S  L  H  T  I  C  E  F  K  I  L  S  F  F  I  I  N  V  I  G  Q  S  F  L  F  H  I  L  L   : K  Q  N  K  E  K  :  *  Q  N  K  R  K </first_frame>
            <second_frame>  R  L  Q  H  R  N  L  V  R  L  L  G  C  C  V  D  M  E  E  K  M  L  I  Y  E  Y  L  E  N  K  S  L  D  S  I  L  F   : N  K  Q  K  S  S  L  L  D  W  Q  K  R  F  N  I  I  C  G  I  A  R  G  L  L  Y  L  H  Q  D  S  R  F  R  I  I  H  R  D  L  K  A  S  N  I  L  L  D  K  D  L  T  P  K  I  S  D  F  G  M  A  R  I  F  G  G  D  E  T  E  G  N  T  K  R  V  V  G  T  Y :   G  Y  M  S  P  E  Y  A  M  D  G  L  F  S  V  K  S  D  V  F  S  F  G  V  L  V  L  E  I  V  T  G  K  K  N  R  G  F  Y  Y  Q  N  N  Q  L  N  L  L  G  H  :  A  W  R  L  W  K  E  G  S  G  S  E  L  L  D  P  S  F  G  E  S  F  S  P  S  E  V  M  R  C  I  Q  V  G  L  L  C  V  Q  E  Q  A  E  D  R  P  N  M  A  T  V  V  L  M  L  G  S  E  S  A  S  L  P  Q  P  K  N  P  G  F  C  L  G  R  R  P  V  D  S  D  S  Y  S  T  N  Y  E  E  T  C  T  V  N  Q  V  T  V  T  M  I  D  P  R  *  L  M  V  S  P  S  E  S  V  Y  I  T  T  R  G  S  Q  F  S  L  V  Y  Y  L  S  F  C  F  W  V  S  F  V  K  D  K  E  H  N  *  V  F  F  S  H  Y  I  Q  F  V  N  S  K  S  C  L  F  S  S  S  M  *  *  A  N  H  S  F  S  I  S  F  *  :  N  R  I  K  K  N :   N  K  I  K  E   </second_frame>
            <third_frame>   G  F  N  T  E  I  *  S  G  F  L  A  V  V  L  I  W  K  R  R  C  *  S  M  N  T  W  R  I  K  V  *  I  Q  F  C  S  :  I  N  R  K  A  R  C  S  T  G  K  S  G  S  I  L  F  V  G  L  L  G  G  F  Y  T  F  I  K  I  Q  D  L  G  L  S  I  E  T  L  K  Q  A  I  F  C  L  I  R  I  *  P  P  K  Y  Q  I  L  A  W  Q  E  F  L  A  E  M  R  L  K  E  I  P  K  E  *  L  E  P   : M  V  T  C  L  R  N  M  Q  W  M  A  S  S  L  L  S  P  M  F  S  A  L  G  F  W  C  *  K  *  *  P  E  R  R  T  G  D  S  I  I  K  I  T  N  S  T  F  L  D  M :   R  G  D  S  G  K  K  G  A  A  Q  S  Y  *  I  H  L  L  E  N  L  F  L  H  L  K  *  *  D  A  Y  R  L  D  C  C  V  S  R  N  K  Q  K  T  D  Q  T  W  P  L  W  F  *  C  *  V  A  K  V  H  H  F  L  S  L  K  T  Q  D  F  A  L  E  E  D  P  L  I  L  I  H  I  R  L  I  M  K  K  L  A  L  S  I  K  L  Q  L  P  *  *  I  P  G  S  *  W  Y  R  P  Q  K  V  C  I  L  L  Q  E  V  H  N  F  L  L  Y  T  I  S  V  F  V  F  G  *  V  L  *  K  I  K  S  I  I  R  S  F  F  L  I  T  Y  N  L  *  I  Q  N  L  V  F  F  H  H  Q  C  N  R  P  I  I  P  F  P  Y  P  S  K :   T  E  *  R  K   : I  T  K  *  K  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0108P14.2" strand="-"/>
                <serials PGL_serial="2" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="18678" stop="18567"/>
                    <exon start="18468" stop="18231"/>
                    <exon start="18144" stop="17994"/>
                    <exon start="17903" stop="17592"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>810</number_coding_nucleotides>
                  <number_encoded_amino_acids>270</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RLQHRNLVRLLGCCVDMEEKMLIYEYLENKSLDSILFNKQKSSLLDWQKRFNIICGIARGLLYLHQDSRFRIIHRDLKASNILLDKDLTPKISDFGMARIFGGDETEGNTKRVVGTYGYMSPEYAMDGLFSVKSDVFSFGVLVLEIVTGKKNRGFYYQNNQLNLLGHAWRLWKEGSGSELLDPSFGESFSPSEVMRCIQVGLLCVQEQAEDRPNMATVVLMLGSESASLPQPKNPGFCLGRRPVDSDSYSTNYEETCTVNQVTVTMIDPR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="22664" PGL_stop="22494"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="22664" e_stop="22494"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="22664" e_stop="22494" e_length="171"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22664" stop="22494"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278874" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACTTTGTCATTCGACCGGAAAACGATGACAGGGAACAGAGTTACCTATGGCAGAGCTTTGATTATCCAACAAACACTTTATTACCTGGGATGAAACTTGGGTGGGATTCAAAATCCGGGATGAATAGAAACATAACATCATGGAAATCAGCAATTGACCCAGCTCCCGGAG</gDNA_template>
            <first_frame> T  L  S  F  D  R  K  T  M  T  G  N  R  V  T  Y  G  R  A  L  I  I  Q  Q  T  L  Y  Y  L  G  *  N  L  G  G  I  Q  N  P  G  *  I  E  T  *  H  H  G  N  Q  Q  L  T  Q  L  P  E </first_frame>
            <second_frame>  L  C  H  S  T  G  K  R  *  Q  G  T  E  L  P  M  A  E  L  *  L  S  N  K  H  F  I  T  W  D  E  T  W  V  G  F  K  I  R  D  E  *  K  H  N  I  M  E  I  S  N  *  P  S  S  R   </second_frame>
            <third_frame>   F  V  I  R  P  E  N  D  D  R  E  Q  S  Y  L  W  Q  S  F  D  Y  P  T  N  T  L  L  P  G  M  K  L  G  W  D  S  K  S  G  M  N  R  N  I  T  S  W  K  S  A  I  D  P  A  P  G  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLm0108P14.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="23149" PGL_stop="22745"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="23149" e_stop="22745"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.968"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.968">
            <gDNA_exon_boundary e_start="23149" e_stop="22745" e_length="405"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23149" stop="22745"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E467281" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AACAAGTACACCAACAAATGTCTCAAACACCAACACTGCAGCAAAACAAAATATTTTTTTCTTAAATTACACAATGAGAAACACCAAAGATTACTACTTTCACCAATTCTTGTTCTTGATTTTGATTTCTCAATTTCTTCATCCAATTCTTGCTATACCCACTGATACAATCACCCCAACACAGTCTTTAACCAAAGATCAAACCTTAGTATCTTCCGATCAACTCTTTGAATTAGGCTTTTTCTCTCCAGGCGGTGCAAATTCAGACAAATGGTATATCGGTATTTGGTATAAAGAGATTCAAGACAGGACTATTGTCTGGGTTGCAAACAGAGCTAAACCCCTTTCAGCTTCATCAACATCAGTCCTAAAAATCACAGAAATTGGTACCCTTCTTCTCGTCGA</gDNA_template>
            <first_frame> N  K  Y  T  N  K  C  L  K  H  Q  H  C  S  K  T  K  Y  F  F  L  K  L  H  N  E  K  H  Q  R  L  L  L  S  P  I  L  V  L  D  F  D  F  S  I  S  S  S  N  S  C  Y  T  H  *  Y  N  H  P  N  T  V  F  N  Q  R  S  N  L  S  I  F  R  S  T  L  *  I  R  L  F  L  S  R  R  C  K  F  R  Q  M  V  Y  R  Y  L  V  *  R  D  S  R  Q  D  Y  C  L  G  C  K  Q  S  *  T  P  F  S  F  I  N  I  S  P  K  N  H  R  N  W  Y  P  S  S  R  R </first_frame>
            <second_frame>  T  S  T  P  T  N  V  S  N  T  N  T  A  A  K  Q  N  I  F  F  L  N  Y  T  M  R  N  T  K  D  Y  Y  F  H  Q  F  L  F  L  I  L  I  S  Q  F  L  H  P  I  L  A  I  P  T  D  T  I  T  P  T  Q  S  L  T  K  D  Q  T  L  V  S  S  D  Q  L  F  E  L  G  F  F  S  P  G  G  A  N  S  D  K  W  Y  I  G  I  W  Y  K  E  I  Q  D  R  T  I  V  W  V  A  N  R  A  K  P  L  S  A  S  S  T  S  V  L  K  I  T  E  I  G  T  L  L  L  V   </second_frame>
            <third_frame>   Q  V  H  Q  Q  M  S  Q  T  P  T  L  Q  Q  N  K  I  F  F  S  *  I  T  Q  *  E  T  P  K  I  T  T  F  T  N  S  C  S  *  F  *  F  L  N  F  F  I  Q  F  L  L  Y  P  L  I  Q  S  P  Q  H  S  L  *  P  K  I  K  P  *  Y  L  P  I  N  S  L  N  *  A  F  S  L  Q  A  V  Q  I  Q  T  N  G  I  S  V  F  G  I  K  R  F  K  T  G  L  L  S  G  L  Q  T  E  L  N  P  F  Q  L  H  Q  H  Q  S  *  K  S  Q  K  L  V  P  F  F  S  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0108P14.2" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="23148" stop="22747"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>402</number_coding_nucleotides>
                  <number_encoded_amino_acids>134</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TSTPTNVSNTNTAAKQNIFFLNYTMRNTKDYYFHQFLFLILISQFLHPILAIPTDTITPTQSLTKDQTLVSSDQLFELGFFSPGGANSDKWYIGIWYKEIQDRTIVWVANRAKPLSASSTSVLKITEIGTLLLV</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="25515" PGL_stop="27259"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="25515" e_stop="27259"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.947"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.947">
            <gDNA_exon_boundary e_start="25515" e_stop="27259" e_length="1745"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25515" stop="26071"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E330047" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25849" stop="26411"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E699676" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26356" stop="26866"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E366247" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26482" stop="27259"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E480526" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26482" stop="27102"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E428601" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAAATGTGGGTCAGTGGGCACTGCTAGGTTGGTTTTTGATAAGATGGATTCTAAGACGGCTGTATCATTGAATGCTATGATAGATGGATATGCACGGAATGGATATCACGATGAAGCTCTTATCATCTTTCAGAAAATGTTGGATGAAGGATTCAAACCAACGAATGTGACTATTATGAGCACTTTACATGCGTGTGCTGAAACAAGGAATATTGAGCTTGGACAATATGTTCACAAACTGGTCAACCAACTAGGTCTTGGTTCTAATGTTGCAGTTGTTAACTCGTTGATTTCAATGTATTGCAAGTGCCAAAGAGTGGATATTGCAGCTGAATTGTTTGAAAACTTGAAAGGAAAAACACTTGTTTCATGGAATGCTTTGATTTTGGGCTATGCACAAAATGGATGTGTAATGGATGCATTAACTCATTTTTGTGAAATGCATCTGCAGAACATCACACCTGATTCATTTACAATGGTAAGTGTTGTTACTGCTCTTGCTGAGTTATCAGTATTACGCCAAGCTAAGTGGATACATGGATTTGCTGTAAGAACTTGTTTGAACGGGAATGTTTTTGTAGCCACTGCACTTGTTGACATGTATGCAAAATGTGGAGCAGTTCACACAGCAAGAAAGCTATTTGACATGATGGATGATAGGCATGTTACAACATGGAATGCCATGATAGATGGATATGGCACACATGGCTTTGGAAAGGAAGCTGTTGAATTATTTGAGGAAATGAGAAAGGGGCATGTAGAGCCTAACGACATAACATTTCTCTGTGTCATCTCAGCTTGCAGCCACTCTGGCTTTGTAGACAAGGGGCGCAACTATTTCACGATCATGAGGGAAGAATACAACTTGGAGCCTTCAATGGACCATTATGGGGCAATGGTTGACCTAATTGGTCGAGCTGGTCGGCTGAGTGAGGCTTGGAACTTCATTGATAATATGCCTACCAGACCAGGACTCAATGTCTATGGTGCAATGTTGGGAGCTTGCAAGATTCACAAAAATGTAGATTTGGGGGAGAAGGCAGCAGACAAACTATTTGAGCTAGATCCCGATGATGGTGGATATCATGTGCTTCTTGCTAATATGTACGCCAGGGCTTCAATATGGCATAAAGTTGCTAATGTCAGAACTATGATGGAGAGAAAAGGTATTCAAAAGACACCTGGATGGAGTCTAGTTGATTTAAGAAACGAGGTCCACACATTCTACTCAGGAAGCACTAGCCATCCTCAGTCAGAGAAGATCTATGCTTACCTTGAGAAACTGTTTGATAGGATTAAAGCTGCTGGATATATACCTGATACTGATTCAATTCACGATGTGGAAGATGTTGTTCAGGAGCAACTGCTAAAGAGCCACAGTGAGAAGCTTGCTATTGTATTTGGTCTTTTAAATACGAGTGCTGGTACAACTATTCACATCAGGAAAAATCTCCGGGTTTGTGGTGACTGCCATACTGCAACAAAGTACATCTCGCTTGTCATGAAACGAGAAATTATTGTACGTGATATGCACCGTTTCCACCATTTTAAGGATGGAGTCTGTTCATGTGGAGATTACTGGTGATATGAATGATTACTCTACCAAGTTGTTACCTCATTTAACTATGTAAAACATTTTATTATTCTGATATAGAATAACCACACCACATGGATGCACCATATCTAGCACAAAGGTCGAGAGTCACGATTGAGGTGAAACTGATTTCTCTAACTGGTTAAAAGCT</gDNA_template>
            <first_frame> *  M  W  V  S  G  H  C  *  V  G  F  *  *  D  G  F  *  D  G  C  I  I  E  C  Y  D  R  W  I  C  T  E  W  I  S  R  *  S  S  Y  H  L  S  E  N  V  G  *  R  I  Q  T  N  E  C  D  Y  Y  E  H  F  T  C  V  C  *  N  K  E  Y  *  A  W  T  I  C  S  Q  T  G  Q  P  T  R  S  W  F  *  C  C  S  C  *  L  V  D  F  N  V  L  Q  V  P  K  S  G  Y  C  S  *  I  V  *  K  L  E  R  K  N  T  C  F  M  E  C  F  D  F  G  L  C  T  K  W  M  C  N  G  C  I  N  S  F  L  *  N  A  S  A  E  H  H  T  *  F  I  Y  N  G  K  C  C  Y  C  S  C  *  V  I  S  I  T  P  S  *  V  D  T  W  I  C  C  K  N  L  F  E  R  E  C  F  C  S  H  C  T  C  *  H  V  C  K  M  W  S  S  S  H  S  K  K  A  I  *  H  D  G  *  *  A  C  Y  N  M  E  C  H  D  R  W  I  W  H  T  W  L  W  K  G  S  C  *  I  I  *  G  N  E  K  G  A  C  R  A  *  R  H  N  I  S  L  C  H  L  S  L  Q  P  L  W  L  C  R  Q  G  A  Q  L  F  H  D  H  E  G  R  I  Q  L  G  A  F  N  G  P  L  W  G  N  G  *  P  N  W  S  S  W  S  A  E  *  G  L  E  L  H  *  *  Y  A  Y  Q  T  R  T  Q  C  L  W  C  N  V  G  S  L  Q  D  S  Q  K  C  R  F  G  G  E  G  S  R  Q  T  I  *  A  R  S  R  *  W  W  I  S  C  A  S  C  *  Y  V  R  Q  G  F  N  M  A  *  S  C  *  C  Q  N  Y  D  G  E  K  R  Y  S  K  D  T  W  M  E  S  S  *  F  K  K  R  G  P  H  I  L  L  R  K  H  *  P  S  S  V  R  E  D  L  C  L  P  *  E  T  V  *  *  D  *  S  C  W  I  Y  T  *  Y  *  F  N  S  R  C  G  R  C  C  S  G  A  T  A  K  E  P  Q  *  E  A  C  Y  C  I  W  S  F  K  Y  E  C  W  Y  N  Y  S  H  Q  E  K  S  P  G  L  W  *  L  P  Y  C  N  K  V  H  L  A  C  H  E  T  R  N  Y  C  T  *  Y  A  P  F  P  P  F  *  G  W  S  L  F  M  W  R  L  L  V  I  *  M  I  T  L  P  S  C  Y  L  I  *  L  C  K  T  F  Y  Y  S  D  I  E  *  P  H  H  M  D  A  P  Y  L  A  Q  R  S  R  V  T  I  E  V  K  L  I  S  L  T  G  *  K   </first_frame>
            <second_frame>  K  C  G  S  V  G  T  A  R  L  V  F  D  K  M  D  S  K  T  A  V  S  L  N  A  M  I  D  G  Y  A  R  N  G  Y  H  D  E  A  L  I  I  F  Q  K  M  L  D  E  G  F  K  P  T  N  V  T  I  M  S  T  L  H  A  C  A  E  T  R  N  I  E  L  G  Q  Y  V  H  K  L  V  N  Q  L  G  L  G  S  N  V  A  V  V  N  S  L  I  S  M  Y  C  K  C  Q  R  V  D  I  A  A  E  L  F  E  N  L  K  G  K  T  L  V  S  W  N  A  L  I  L  G  Y  A  Q  N  G  C  V  M  D  A  L  T  H  F  C  E  M  H  L  Q  N  I  T  P  D  S  F  T  M  V  S  V  V  T  A  L  A  E  L  S  V  L  R  Q  A  K  W  I  H  G  F  A  V  R  T  C  L  N  G  N  V  F  V  A  T  A  L  V  D  M  Y  A  K  C  G  A  V  H  T  A  R  K  L  F  D  M  M  D  D  R  H  V  T  T  W  N  A  M  I  D  G  Y  G  T  H  G  F  G  K  E  A  V  E  L  F  E  E  M  R  K  G  H  V  E  P  N  D  I  T  F  L  C  V  I  S  A  C  S  H  S  G  F  V  D  K  G  R  N  Y  F  T  I  M  R  E  E  Y  N  L  E  P  S  M  D  H  Y  G  A  M  V  D  L  I  G  R  A  G  R  L  S  E  A  W  N  F  I  D  N  M  P  T  R  P  G  L  N  V  Y  G  A  M  L  G  A  C  K  I  H  K  N  V  D  L  G  E  K  A  A  D  K  L  F  E  L  D  P  D  D  G  G  Y  H  V  L  L  A  N  M  Y  A  R  A  S  I  W  H  K  V  A  N  V  R  T  M  M  E  R  K  G  I  Q  K  T  P  G  W  S  L  V  D  L  R  N  E  V  H  T  F  Y  S  G  S  T  S  H  P  Q  S  E  K  I  Y  A  Y  L  E  K  L  F  D  R  I  K  A  A  G  Y  I  P  D  T  D  S  I  H  D  V  E  D  V  V  Q  E  Q  L  L  K  S  H  S  E  K  L  A  I  V  F  G  L  L  N  T  S  A  G  T  T  I  H  I  R  K  N  L  R  V  C  G  D  C  H  T  A  T  K  Y  I  S  L  V  M  K  R  E  I  I  V  R  D  M  H  R  F  H  H  F  K  D  G  V  C  S  C  G  D  Y  W  *  Y  E  *  L  L  Y  Q  V  V  T  S  F  N  Y  V  K  H  F  I  I  L  I  *  N  N  H  T  T  W  M  H  H  I  *  H  K  G  R  E  S  R  L  R  *  N  *  F  L  *  L  V  K  S  </second_frame>
            <third_frame>   N  V  G  Q  W  A  L  L  G  W  F  L  I  R  W  I  L  R  R  L  Y  H  *  M  L  *  *  M  D  M  H  G  M  D  I  T  M  K  L  L  S  S  F  R  K  C  W  M  K  D  S  N  Q  R  M  *  L  L  *  A  L  Y  M  R  V  L  K  Q  G  I  L  S  L  D  N  M  F  T  N  W  S  T  N  *  V  L  V  L  M  L  Q  L  L  T  R  *  F  Q  C  I  A  S  A  K  E  W  I  L  Q  L  N  C  L  K  T  *  K  E  K  H  L  F  H  G  M  L  *  F  W  A  M  H  K  M  D  V  *  W  M  H  *  L  I  F  V  K  C  I  C  R  T  S  H  L  I  H  L  Q  W  *  V  L  L  L  L  L  L  S  Y  Q  Y  Y  A  K  L  S  G  Y  M  D  L  L  *  E  L  V  *  T  G  M  F  L  *  P  L  H  L  L  T  C  M  Q  N  V  E  Q  F  T  Q  Q  E  S  Y  L  T  *  W  M  I  G  M  L  Q  H  G  M  P  *  *  M  D  M  A  H  M  A  L  E  R  K  L  L  N  Y  L  R  K  *  E  R  G  M  *  S  L  T  T  *  H  F  S  V  S  S  Q  L  A  A  T  L  A  L  *  T  R  G  A  T  I  S  R  S  *  G  K  N  T  T  W  S  L  Q  W  T  I  M  G  Q  W  L  T  *  L  V  E  L  V  G  *  V  R  L  G  T  S  L  I  I  C  L  P  D  Q  D  S  M  S  M  V  Q  C  W  E  L  A  R  F  T  K  M  *  I  W  G  R  R  Q  Q  T  N  Y  L  S  *  I  P  M  M  V  D  I  M  C  F  L  L  I  C  T  P  G  L  Q  Y  G  I  K  L  L  M  S  E  L  *  W  R  E  K  V  F  K  R  H  L  D  G  V  *  L  I  *  E  T  R  S  T  H  S  T  Q  E  A  L  A  I  L  S  Q  R  R  S  M  L  T  L  R  N  C  L  I  G  L  K  L  L  D  I  Y  L  I  L  I  Q  F  T  M  W  K  M  L  F  R  S  N  C  *  R  A  T  V  R  S  L  L  L  Y  L  V  F  *  I  R  V  L  V  Q  L  F  T  S  G  K  I  S  G  F  V  V  T  A  I  L  Q  Q  S  T  S  R  L  S  *  N  E  K  L  L  Y  V  I  C  T  V  S  T  I  L  R  M  E  S  V  H  V  E  I  T  G  D  M  N  D  Y  S  T  K  L  L  P  H  L  T  M  *  N  I  L  L  F  *  Y  R  I  T  T  P  H  G  C  T  I  S  S  T  K  V  E  S  H  D  *  G  E  T  D  F  S  N  W  L  K  A </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0108P14.2" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="25516" stop="27099"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1581</number_coding_nucleotides>
                  <number_encoded_amino_acids>527</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KCGSVGTARLVFDKMDSKTAVSLNAMIDGYARNGYHDEALIIFQKMLDEGFKPTNVTIMSTLHACAETRNIELGQYVHKLVNQLGLGSNVAVVNSLISMYCKCQRVDIAAELFENLKGKTLVSWNALILGYAQNGCVMDALTHFCEMHLQNITPDSFTMVSVVTALAELSVLRQAKWIHGFAVRTCLNGNVFVATALVDMYAKCGAVHTARKLFDMMDDRHVTTWNAMIDGYGTHGFGKEAVELFEEMRKGHVEPNDITFLCVISACSHSGFVDKGRNYFTIMREEYNLEPSMDHYGAMVDLIGRAGRLSEAWNFIDNMPTRPGLNVYGAMLGACKIHKNVDLGEKAADKLFELDPDDGGYHVLLANMYARASIWHKVANVRTMMERKGIQKTPGWSLVDLRNEVHTFYSGSTSHPQSEKIYAYLEKLFDRIKAAGYIPDTDSIHDVEDVVQEQLLKSHSEKLAIVFGLLNTSAGTTIHIRKNLRVCGDCHTATKYISLVMKREIIVRDMHRFHHFKDGVCSCGDYW*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="29102" PGL_stop="29836"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="29102" e_stop="29836"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="29102" e_stop="29836" e_length="735"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29102" stop="29836"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E578379" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTGCTTTCAAAGAAGCTAATGACAATATGTCTTTATTCCAAAATTCAAACACCCTGCTAAAATCAGCATAATAACAACGTTTTCTCTCTCTAAGCCCCACTCGGACATTATTATTCATCACTCTTAGCCTCTCTGGAAAGTGGCAAAGCTAAATACAGGAAGCTTCTCTTCTTCCGCCTTTTTTTTCCCTATTGGCACTGACTGCACATAAAACTACAAATTTATGTAAATATTCAGCTTCACAGTACTCCCTTATCTTTGTTCACCCCCTCCAGTTCCAAAGAACAAAGATTCTTTGAATAGTCTATAACATAAAAGTACAAATAGGCGAATTTTCTCTACACAATTATGCTAATAGTGAAACCTATAGAGATTGTGCATCTAATTAGTTGCAATTCTACACTCTGCTTTAGTTTAGAGTTCAATTCATTCAAAGATCCTCCACGTATCTGTTCCCACTCGAACAAAACTGCTATGCATGAGACAACAAAATCAATGAAAACAAAATAGGGACGCTGGTTCACTGTCTTACTATCTTAGCACCACTGAACCTGAGAAATCTGGAACGTTTGATCATCCCTTATATCGCTCAATCTCCGCTTTTTGATATTGTCCTTATCCTGAGTCTCGCATTGAGAGCTTGTATGTTCACACTCCAGAACACTTTTTGGCGTCAACTTACTACAGTACTCCCTCCCTTCTATCGGCATTTCCCGCATTACAGCCAAAGCATTC</gDNA_template>
            <first_frame> L  L  S  K  K  L  M  T  I  C  L  Y  S  K  I  Q  T  P  C  *  N  Q  H  N  N  N  V  F  S  L  *  A  P  L  G  H  Y  Y  S  S  L  L  A  S  L  E  S  G  K  A  K  Y  R  K  L  L  F  F  R  L  F  F  P  Y  W  H  *  L  H  I  K  L  Q  I  Y  V  N  I  Q  L  H  S  T  P  L  S  L  F  T  P  S  S  S  K  E  Q  R  F  F  E  *  S  I  T  *  K  Y  K  *  A  N  F  L  Y  T  I  M  L  I  V  K  P  I  E  I  V  H  L  I  S  C  N  S  T  L  C  F  S  L  E  F  N  S  F  K  D  P  P  R  I  C  S  H  S  N  K  T  A  M  H  E  T  T  K  S  M  K  T  K  *  G  R  W  F  T  V  L  L  S  *  H  H  *  T  *  E  I  W  N  V  *  S  S  L  I  S  L  N  L  R  F  L  I  L  S  L  S  *  V  S  H  *  E  L  V  C  S  H  S  R  T  L  F  G  V  N  L  L  Q  Y  S  L  P  S  I  G  I  S  R  I  T  A  K  A  F </first_frame>
            <second_frame>  C  F  Q  R  S  *  *  Q  Y  V  F  I  P  K  F  K  H  P  A  K  I  S  I  I  T  T  F  S  L  S  K  P  H  S  D  I  I  I  H  H  S  *  P  L  W  K  V  A  K  L  N  T  G  S  F  S  S  S  A  F  F  F  P  I  G  T  D  C  T  *  N  Y  K  F  M  *  I  F  S  F  T  V  L  P  Y  L  C  S  P  P  P  V  P  K  N  K  D  S  L  N  S  L  *  H  K  S  T  N  R  R  I  F  S  T  Q  L  C  *  *  *  N  L  *  R  L  C  I  *  L  V  A  I  L  H  S  A  L  V  *  S  S  I  H  S  K  I  L  H  V  S  V  P  T  R  T  K  L  L  C  M  R  Q  Q  N  Q  *  K  Q  N  R  D  A  G  S  L  S  Y  Y  L  S  T  T  E  P  E  K  S  G  T  F  D  H  P  L  Y  R  S  I  S  A  F  *  Y  C  P  Y  P  E  S  R  I  E  S  L  Y  V  H  T  P  E  H  F  L  A  S  T  Y  Y  S  T  P  S  L  L  S  A  F  P  A  L  Q  P  K  H   </second_frame>
            <third_frame>   A  F  K  E  A  N  D  N  M  S  L  F  Q  N  S  N  T  L  L  K  S  A  *  *  Q  R  F  L  S  L  S  P  T  R  T  L  L  F  I  T  L  S  L  S  G  K  W  Q  S  *  I  Q  E  A  S  L  L  P  P  F  F  S  L  L  A  L  T  A  H  K  T  T  N  L  C  K  Y  S  A  S  Q  Y  S  L  I  F  V  H  P  L  Q  F  Q  R  T  K  I  L  *  I  V  Y  N  I  K  V  Q  I  G  E  F  S  L  H  N  Y  A  N  S  E  T  Y  R  D  C  A  S  N  *  L  Q  F  Y  T  L  L  *  F  R  V  Q  F  I  Q  R  S  S  T  Y  L  F  P  L  E  Q  N  C  Y  A  *  D  N  K  I  N  E  N  K  I  G  T  L  V  H  C  L  T  I  L  A  P  L  N  L  R  N  L  E  R  L  I  I  P  Y  I  A  Q  S  P  L  F  D  I  V  L  I  L  S  L  A  L  R  A  C  M  F  T  L  Q  N  T  F  W  R  Q  L  T  T  V  L  P  P  F  Y  R  H  F  P  H  Y  S  Q  S  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0108P14.2" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="29584" stop="29835"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>252</number_coding_nucleotides>
                  <number_encoded_amino_acids>84</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DNKINENKIGTLVHCLTILAPLNLRNLERLIIPYIAQSPLFDIVLILSLALRACMFTLQNTFWRQLTTVLPPFYRHFPHYSQSI</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="-" PGL_start="31245" PGL_stop="30706"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="31245" e_stop="31121"/>
            <exon e_start="30962" e_stop="30876"/>
            <exon e_start="30801" e_stop="30706"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.998" e_score="0.944"/>
          <exon-intron don_prob="0.732" acc_prob="0.898" e_score="1.000"/>
          <exon-only e_score="0.990"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.944">
            <gDNA_exon_boundary e_start="31245" e_stop="31121" e_length="125"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.998">
            <gDNA_intron_boundary i_start="31120" i_stop="30963" i_length="158"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="30962" e_stop="30876" e_length="87"/>
          </exon>
          <intron i_serial="2" don_prob="0.732" acc_prob="0.898">
            <gDNA_intron_boundary i_start="30875" i_stop="30802" i_length="74"/>
          </intron>
          <exon e_serial="3" e_score="0.990">
            <gDNA_exon_boundary e_start="30801" e_stop="30706" e_length="96"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31245" stop="31121"/>
              <exon start="30962" stop="30876"/>
              <exon start="30801" stop="30706"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E280044" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACCATTTCGACGCCGTTTCAGCTCTCTTTGCCAACGAGTCCGATCACATGCCGTCGTTTCTCGACTTCAAATCCACCGATGTGCGCTTTTCCCTTCGCCGCCATTCTGTTTTCCTTATTTCTCAA : GTACAAAGTTCTTACAAATTTGATGGCTATATTGCATACCTCGCCGTCAATTACATTGATCGTTTTCTCTCCAAACAAGCAGTTCTG : GAGAATAAGCCATGGATTGTACGGATTCTCGTCATTGTTAGCCTTTCTCTTGCCGCAAAAATGAGGAACGTCGATTTATCACTGTCGGATATTCAG</gDNA_template>
            <first_frame> T  I  S  T  P  F  Q  L  S  L  P  T  S  P  I  T  C  R  R  F  S  T  S  N  P  P  M  C  A  F  P  F  A  A  I  L  F  S  L  F  L  K :   Y  K  V  L  T  N  L  M  A  I  L  H  T  S  P  S  I  T  L  I  V  F  S  P  N  K  Q  F  W :   R  I  S  H  G  L  Y  G  F  S  S  L  L  A  F  L  L  P  Q  K  *  G  T  S  I  Y  H  C  R  I  F   </first_frame>
            <second_frame>  P  F  R  R  R  F  S  S  L  C  Q  R  V  R  S  H  A  V  V  S  R  L  Q  I  H  R  C  A  L  F  P  S  P  P  F  C  F  P  Y  F  S   : S  T  K  F  L  Q  I  *  W  L  Y  C  I  P  R  R  Q  L  H  *  S  F  S  L  Q  T  S  S  S   : G  E  *  A  M  D  C  T  D  S  R  H  C  *  P  F  S  C  R  K  N  E  E  R  R  F  I  T  V  G  Y  S  </second_frame>
            <third_frame>   H  F  D  A  V  S  A  L  F  A  N  E  S  D  H  M  P  S  F  L  D  F  K  S  T  D  V  R  F  S  L  R  R  H  S  V  F  L  I  S  Q  :  V  Q  S  S  Y  K  F  D  G  Y  I  A  Y  L  A  V  N  Y  I  D  R  F  L  S  K  Q  A  V  L  :  E  N  K  P  W  I  V  R  I  L  V  I  V  S  L  S  L  A  A  K  M  R  N  V  D  L  S  L  S  D  I  Q </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0108P14.2" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="31243" stop="31121"/>
                    <exon start="30962" stop="30876"/>
                    <exon start="30801" stop="30706"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>306</number_coding_nucleotides>
                  <number_encoded_amino_acids>102</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HFDAVSALFANESDHMPSFLDFKSTDVRFSLRRHSVFLISQVQSSYKFDGYIAYLAVNYIDRFLSKQAVLENKPWIVRILVIVSLSLAAKMRNVDLSLSDIQ</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0108P14.2" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="31245" stop="31121"/>
                    <exon start="30962" stop="30876"/>
                    <exon start="30801" stop="30738"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>273</number_coding_nucleotides>
                  <number_encoded_amino_acids>91</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TISTPFQLSLPTSPITCRRFSTSNPPMCAFPFAAILFSLFLKYKVLTNLMAILHTSPSITLIVFSPNKQFWRISHGLYGFSSLLAFLLPQK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 92 chains have been computed
$ 
$ memory statistics:
$ 65976 bytes spliced alignments in total
$ 27 spliced alignments have been stored
$ 2443 bytes was the average size of a spliced alignment
$ 13304 bytes predicted gene locations in total
$ 7 predicted gene locations have been stored
$ 1900 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 100 backtrace matrices have been allocated
$ 
$ date finished: 2009-12-01 11:37:00
-->
