<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-07-29 13:42:36"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E236372" ref_strand="+" ref_description="SGN-E236372 [cLED-13-C20]">
      <seq>ttgagcttaacaagttgcgcttagcagctaaagattggggtttctttcagttgattaatcatggagttagttgttcagtagtggagaagatgaaagacgagactcaaaaattcttcgatctgccattagaagagaagaaaaagtttgaaaaatcttcaggagatacagatggatttggacagctattcgtcgtctctgatgaacaaaagcttgactgggctgatctcttttacttgaagacttcacccacatatttgcgaaagcctgtgttttccaagctttacctttcacttagagagacgattgaagagtacgcggatgaaataaagaagctaagcatgagagtattgaaaacgttgggtaaagctttggggattgatgaagatgaagtgaagagtgttttcgaagaaggaatgcaatcgatgagaatgaattactatccaccatgtccacaaccagagaaagtgatgggacttactcctcattcagatgcaacaggccttacaatacttcttcaagttaatgaaactcaaggtcttcaaattaaaaaagatggaatttggatccccattgaaccactccctaatgccttcatagtccatgttggagatgcttttgagattttctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="-" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="3442" stop="245"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3142" g_stop="3093" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="50" r_length="50" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="3092" i_stop="1203" i_length="1890">
            <donor d_prob="0.986" d_score="0.98"/>
            <acceptor a_prob="0.589" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="1202" g_stop="958" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="51" r_stop="295" r_length="245" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="957" i_stop="877" i_length="81">
            <donor d_prob="0.717" d_score="1.00"/>
            <acceptor a_prob="0.882" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="876" g_stop="552" g_length="325"/>
          <reference_exon_boundary r_type="cDNA" r_start="296" r_stop="620" r_length="325" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="-" ref_id="SGN-E236372" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>620</cumulative_length_of_scored_exons>
        <coverage percentage="0.987" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E236372" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3142" e_stop="3093"/>
          <exon e_start="1202" e_stop="958"/>
          <exon e_start="876" e_stop="552"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGAGCTTAACAAGTTGCACTTAGCAGCTAAAGATTGGGGTTTCTTTCAGGTACATATAGATCAATAATATACTAGCAAAGATATATCAAGTGACTTTTCTCATACAAAATATCAATTAAAAGAGCATATGTATTCTTTAGTTTAAGCTTTCTAAATAAAATTATCACATACTTTAATATGATATCAGTTTTTAAGATTGTTTGGTTCAAAACGGTAAAGCCCATTGGCCTTGAAGTAGTCCGTGGTTCAGCCAAAACGGACCATATATAGGTTGTATTTGCATATTTTTACTTTGTCTCGACTTTTATGATACAATTTTTTTCAGTGTCAAAAACACCTAAATCAATCTTTTCTTAGTTCTATACCTAAATTATTGAGAATATGAGTCTCACATTTAAGTTATTACTTAGTAGTTTGAGAAACACATTTTTCTCTTTTATTACACTCTTATATCATGGTGTATGTACGTCTACACCTACTCCTTTAACTTTACCTCATGTTATATTTATGTCCTTTTAACTTTGAGTGTGCATAAGTAGACACTTAAACTCGTATAAAATTGAACAAATAGACACATACACCCTATGTGGCATCTTACATGGTAATTTACGTTCTACATGGTGTCTTGTGTGTATTGTACCATGTAAGATTAATGTGTCAATCTGTTCAACTTTATACAAGTTTAAGTGTCTATTTTTGCACAGCCCAAAGTTGGATCGTATACATGTTAAATGATGCCAAGTTAAAGGGCATATACATGTATTATGCCATAAAAATCATGGACAAAACATTCTATCTTGGCAAAAATTAAATAGATTATTAATATCAATTAAAATAATAGACAAAATTATATTTCACCTTAACAAAAAAATTTAATAAATTATAGTATTAGTTAAAGTTAAAAGTAAAGGCATTACTATATATCCAAAAAATTTATAAAATAAAGTATAAAATATTTTTCTTACTTTTACTCCAGACTCCACCACTTCCTCTCACCCCACCCCCTCCCCACCACAATTTTTTAGTTTTTTTAAAAGAAAAATAAAATTCCATTTGTAAAAGTCTTTTTGAAAATATCTTACTTCCTCTCCCCCTAACTCTCCAAATAATAATTTAGATATTATTTTATTTTTTTAAAAAAAAATTCTACCTCACTCCACCTAACACAATACTTTCAATTATTTCCTCATATTGTGTTATATATAATATTTTTCTAAAAATATATGTACATATCTAGCACAAAACTAAAAAAATATATCTAAAAAAGAAAAAAGAGAGTAGACGGTGTATGGTAGAATTTCTTTTTTAATAAAAAAATAAAAATAATATCAATCTTTTTTAGGAAGAAGTGAGGAAGGGGGTGAAGTTTGGAATTTTTTTAAAAAAAATTAAAAGAATAAAAGGGTGGGGTAAGAAAAAAATTCTAGATTTTATCTTTTTTTTTAAAAAAATTCTTCTGGGATAGTAATACTTTAATGTTTATCTTTCAATTAATATTAATGATTTACTTAAAAAAAAATTAAGACATATTTTATTTATGTGGCGAAGTTTTGCTGGTAAAACAGAAGGTAGGCATACTATATAAATGTGCTCTTTAACTTGGATTTATTTTACATGTATGTCCCTCCAAGTTTGGATATGTATAACTTAAACTTGTATAAAGTTGAACAAGTAAATATATAAGTCCTACATGAAACAATACACGTAGGATACCATGTAGAACAAAAATGACATGTAGGATGTCATGTTAGACCTACATGTCTATTTGTTCAATTTTATACTAATTTGAGCGTCTACTTTTATATATCCAAAGTTAAAGAATATAAATGTGATTTAAAACTAAGTTAAAATACATATATGCATAAAGTGTATTACACTCCCAATAGTTTAAACTCCATGCGCAATAGATAGTAATAACAAGTTCAACTACATGCTGCAGTTGATTAATCATGGAGTTAGTTGTTCAGTAGTGGAGAAGATGAAAGACGAGACTCAAAAATTCTTCGATCTGCCATTAGAAGAGAAGAAAAAGTTTGAAAAATCTTCAGGAGATACAGATGGATTTGGACAGCTATTCGTCGTCTCTGATGAACAAAAGCTTGACTGGGCTGATCTCTTTTACTTGAAGACTTCACCCACATATTTGCGAAAGCCTGTGTTTTCCAAGCTTTACCTTTCACTTAGGTACATACCAAACGTTGTTTGCGCCCTTTTTAACGCTTGAAAATAAGTAAGAGAATCGCTTATTAATGCGTATAAATGTAGAGAGACGATTGAAGAGTACGCGGATGAAATAAAGAAGCTAAGCATGAGAGTATTGGAAACGTTGGGTAAAGCTTTGGGGATTGATGAAGATGAAGTGAAGAGTGTTTTCAAAGAAGGAATGCAATCGATGAGGATGAATTACTATCCACCATGTCCACAACCAGAGAAAGTGATGGGACTTACTCCTCATTCAGATGCAACAGGCCTTACAATACTTCTTCAAGTTAATGAAACTCAAGGTCTTCAAATTAAAAAAGATGGAATTTGGATCCCCATTGAACCACTCCCTAATGCCTTCATAGTCAATGTTGGAGATGCTTTTGAG</genome_strand>
        <mrna_strand>TTGAGCTTAACAAGTTGCGCTTAGCAGCTAAAGATTGGGGTTTCTTTCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATTAATCATGGAGTTAGTTGTTCAGTAGTGGAGAAGATGAAAGACGAGACTCAAAAATTCTTCGATCTGCCATTAGAAGAGAAGAAAAAGTTTGAAAAATCTTCAGGAGATACAGATGGATTTGGACAGCTATTCGTCGTCTCTGATGAACAAAAGCTTGACTGGGCTGATCTCTTTTACTTGAAGACTTCACCCACATATTTGCGAAAGCCTGTGTTTTCCAAGCTTTACCTTTCACTTAG.................................................................................AGAGACGATTGAAGAGTACGCGGATGAAATAAAGAAGCTAAGCATGAGAGTATTGAAAACGTTGGGTAAAGCTTTGGGGATTGATGAAGATGAAGTGAAGAGTGTTTTCGAAGAAGGAATGCAATCGATGAGAATGAATTACTATCCACCATGTCCACAACCAGAGAAAGTGATGGGACTTACTCCTCATTCAGATGCAACAGGCCTTACAATACTTCTTCAAGTTAATGAAACTCAAGGTCTTCAAATTAAAAAAGATGGAATTTGGATCCCCATTGAACCACTCCCTAATGCCTTCATAGTCCATGTTGGAGATGCTTTTGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E453916" ref_strand="+" ref_description="SGN-E453916 [cSTS-21-H3]">
      <seq>tcgcgatacgtacgtgactgccaagaccgttcaattgcaacatcaaattactaagcaagttccagtaattgatatgcaacgattgatcaacctctaaccgatcatgactccatgaatcttgagcttaataagttgcactttgcagctaaagattggggtttctttcagttaattaatcatggagttagttgtttagtggtggagaagatgaaacatgaaactcaaaagttcttcgatcttccattagaagagaaaaagaagtttgaacaatcatcaggagatacagatggatttggacagttgttcgttgtctctgatgaacaaaagcttgactgggctgatctcttttacttgaagaaccgaccgacgtatttgcggaagcctatattttccaagctttatctttcacttagagagacgattgaagagtacgcggatgaaataaaaaagctaagcatgaaagtattggaaatgttgggtaaagctttggggattgatgaaaaagaagtgaagagtctttttgaagaaggaatgcaatcaatgaggatgaattactatccaccatgtccacaacctgacaaagtgatngggaattactcctcattcagatgcaacaggccttacaatacttcttcaagtcaatgaaactcaaggtcttcaaatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="-" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="3536" stop="327"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3257" g_stop="3093" g_length="165"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="168" r_length="168" r_score="0.879"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="3092" i_stop="1203" i_length="1890">
            <donor d_prob="0.986" d_score="0.96"/>
            <acceptor a_prob="0.589" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="1202" g_stop="958" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="169" r_stop="413" r_length="245" r_score="0.898"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="957" i_stop="877" i_length="81">
            <donor d_prob="0.717" d_score="0.88"/>
            <acceptor a_prob="0.882" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="876" g_stop="627" g_length="250"/>
          <reference_exon_boundary r_type="cDNA" r_start="414" r_stop="664" r_length="251" r_score="0.940"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="-" ref_id="SGN-E453916" ref_strand="+">
        <total_alignment_score>0.909</total_alignment_score>
        <cumulative_length_of_scored_exons>660</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E453916" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3257" e_stop="3093"/>
          <exon e_start="1202" e_stop="958"/>
          <exon e_start="876" e_stop="627"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGCGATACGTACGCGATGATCAAGACCGTTCAATTGCATCATCAATTTA-TAAAGAAGTCCCAGTAATTGATATGCAACGATTGATCAA-CTTTAA-TGATCATGACTCCATGAATCTTGAGCTTAACAAGTTGCACTTAGCAGCTAAAGATTGGGGTTTCTTTCAGGTACATATAGATCAATAATATACTAGCAAAGATATATCAAGTGACTTTTCTCATACAAAATATCAATTAAAAGAGCATATGTATTCTTTAGTTTAAGCTTTCTAAATAAAATTATCACATACTTTAATATGATATCAGTTTTTAAGATTGTTTGGTTCAAAACGGTAAAGCCCATTGGCCTTGAAGTAGTCCGTGGTTCAGCCAAAACGGACCATATATAGGTTGTATTTGCATATTTTTACTTTGTCTCGACTTTTATGATACAATTTTTTTCAGTGTCAAAAACACCTAAATCAATCTTTTCTTAGTTCTATACCTAAATTATTGAGAATATGAGTCTCACATTTAAGTTATTACTTAGTAGTTTGAGAAACACATTTTTCTCTTTTATTACACTCTTATATCATGGTGTATGTACGTCTACACCTACTCCTTTAACTTTACCTCATGTTATATTTATGTCCTTTTAACTTTGAGTGTGCATAAGTAGACACTTAAACTCGTATAAAATTGAACAAATAGACACATACACCCTATGTGGCATCTTACATGGTAATTTACGTTCTACATGGTGTCTTGTGTGTATTGTACCATGTAAGATTAATGTGTCAATCTGTTCAACTTTATACAAGTTTAAGTGTCTATTTTTGCACAGCCCAAAGTTGGATCGTATACATGTTAAATGATGCCAAGTTAAAGGGCATATACATGTATTATGCCATAAAAATCATGGACAAAACATTCTATCTTGGCAAAAATTAAATAGATTATTAATATCAATTAAAATAATAGACAAAATTATATTTCACCTTAACAAAAAAATTTAATAAATTATAGTATTAGTTAAAGTTAAAAGTAAAGGCATTACTATATATCCAAAAAATTTATAAAATAAAGTATAAAATATTTTTCTTACTTTTACTCCAGACTCCACCACTTCCTCTCACCCCACCCCCTCCCCACCACAATTTTTTAGTTTTTTTAAAAGAAAAATAAAATTCCATTTGTAAAAGTCTTTTTGAAAATATCTTACTTCCTCTCCCCCTAACTCTCCAAATAATAATTTAGATATTATTTTATTTTTTTAAAAAAAAATTCTACCTCACTCCACCTAACACAATACTTTCAATTATTTCCTCATATTGTGTTATATATAATATTTTTCTAAAAATATATGTACATATCTAGCACAAAACTAAAAAAATATATCTAAAAAAGAAAAAAGAGAGTAGACGGTGTATGGTAGAATTTCTTTTTTAATAAAAAAATAAAAATAATATCAATCTTTTTTAGGAAGAAGTGAGGAAGGGGGTGAAGTTTGGAATTTTTTTAAAAAAAATTAAAAGAATAAAAGGGTGGGGTAAGAAAAAAATTCTAGATTTTATCTTTTTTTTTAAAAAAATTCTTCTGGGATAGTAATACTTTAATGTTTATCTTTCAATTAATATTAATGATTTACTTAAAAAAAAATTAAGACATATTTTATTTATGTGGCGAAGTTTTGCTGGTAAAACAGAAGGTAGGCATACTATATAAATGTGCTCTTTAACTTGGATTTATTTTACATGTATGTCCCTCCAAGTTTGGATATGTATAACTTAAACTTGTATAAAGTTGAACAAGTAAATATATAAGTCCTACATGAAACAATACACGTAGGATACCATGTAGAACAAAAATGACATGTAGGATGTCATGTTAGACCTACATGTCTATTTGTTCAATTTTATACTAATTTGAGCGTCTACTTTTATATATCCAAAGTTAAAGAATATAAATGTGATTTAAAACTAAGTTAAAATACATATATGCATAAAGTGTATTACACTCCCAATAGTTTAAACTCCATGCGCAATAGATAGTAATAACAAGTTCAACTACATGCTGCAGTTGATTAATCATGGAGTTAGTTGTTCAGTAGTGGAGAAGATGAAAGACGAGACTCAAAAATTCTTCGATCTGCCATTAGAAGAGAAGAAAAAGTTTGAAAAATCTTCAGGAGATACAGATGGATTTGGACAGCTATTCGTCGTCTCTGATGAACAAAAGCTTGACTGGGCTGATCTCTTTTACTTGAAGACTTCACCCACATATTTGCGAAAGCCTGTGTTTTCCAAGCTTTACCTTTCACTTAGGTACATACCAAACGTTGTTTGCGCCCTTTTTAACGCTTGAAAATAAGTAAGAGAATCGCTTATTAATGCGTATAAATGTAGAGAGACGATTGAAGAGTACGCGGATGAAATAAAGAAGCTAAGCATGAGAGTATTGGAAACGTTGGGTAAAGCTTTGGGGATTGATGAAGATGAAGTGAAGAGTGTTTTCAAAGAAGGAATGCAATCGATGAGGATGAATTACTATCCACCATGTCCACAACCAGAGAAAGTGAT-GGGACTTACTCCTCATTCAGATGCAACAGGCCTTACAATACTTCTTCAAGTTAATGAAACTCAAGGTCTTCAAATT</genome_strand>
        <mrna_strand>TCGCGATACGTACGTGACTGCCAAGACCGTTCAATTGCAACATCAAATTACTAAGCAAGTTCCAGTAATTGATATGCAACGATTGATCAACCTCTAACCGATCATGACTCCATGAATCTTGAGCTTAATAAGTTGCACTTTGCAGCTAAAGATTGGGGTTTCTTTCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAATTAATCATGGAGTTAGTTGTTTAGTGGTGGAGAAGATGAAACATGAAACTCAAAAGTTCTTCGATCTTCCATTAGAAGAGAAAAAGAAGTTTGAACAATCATCAGGAGATACAGATGGATTTGGACAGTTGTTCGTTGTCTCTGATGAACAAAAGCTTGACTGGGCTGATCTCTTTTACTTGAAGAACCGACCGACGTATTTGCGGAAGCCTATATTTTCCAAGCTTTATCTTTCACTTAG.................................................................................AGAGACGATTGAAGAGTACGCGGATGAAATAAAAAAGCTAAGCATGAAAGTATTGGAAATGTTGGGTAAAGCTTTGGGGATTGATGAAAAAGAAGTGAAGAGTCTTTTTGAAGAAGGAATGCAATCAATGAGGATGAATTACTATCCACCATGTCCACAACCTGACAAAGTGATNGGGAATTACTCCTCATTCAGATGCAACAGGCCTTACAATACTTCTTCAAGTCAATGAAACTCAAGGTCTTCAAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E377835" ref_strand="+" ref_description="SGN-E377835 [TUS-21-J1]">
      <seq>ttgagcttaacatgttgcgcttagcagctaaagattggggtttctttcagttgattaatcatggagttagttgttcagtagtggagaagatgaaagacgagactcaaaaattcttcgatctgccattagaagagaagaaaaagtttgaaaaatcttcaggagatacagatggatttggacagctattcatcatctctgatgaacaaaagcttgactgggctgatctcttttacttgaatacttcacccacatatttgcgaaagcctgtgttttccaagctttacctttcacttagagagacgattgaagagtacgcggatgaaataaagaaactaagcatgagagtattgaaaacgttgggtaaagctttggggattgatgaagatgaagtgaagagtgttttcgaagaaggaatgcaatcgatgagaatgaattactatccaccatgtccacaaccagagaaagtgatgggacttactcctgattcaaatgcaacaggcctta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="-" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="3442" stop="368"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3142" g_stop="3093" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="50" r_length="50" r_score="0.960"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="3092" i_stop="1203" i_length="1890">
            <donor d_prob="0.986" d_score="0.96"/>
            <acceptor a_prob="0.589" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="1202" g_stop="958" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="51" r_stop="295" r_length="245" r_score="0.988"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="957" i_stop="877" i_length="81">
            <donor d_prob="0.717" d_score="1.00"/>
            <acceptor a_prob="0.882" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="876" g_stop="668" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="296" r_stop="504" r_length="209" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="-" ref_id="SGN-E377835" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>504</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E377835" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3142" e_stop="3093"/>
          <exon e_start="1202" e_stop="958"/>
          <exon e_start="876" e_stop="668"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGAGCTTAACAAGTTGCACTTAGCAGCTAAAGATTGGGGTTTCTTTCAGGTACATATAGATCAATAATATACTAGCAAAGATATATCAAGTGACTTTTCTCATACAAAATATCAATTAAAAGAGCATATGTATTCTTTAGTTTAAGCTTTCTAAATAAAATTATCACATACTTTAATATGATATCAGTTTTTAAGATTGTTTGGTTCAAAACGGTAAAGCCCATTGGCCTTGAAGTAGTCCGTGGTTCAGCCAAAACGGACCATATATAGGTTGTATTTGCATATTTTTACTTTGTCTCGACTTTTATGATACAATTTTTTTCAGTGTCAAAAACACCTAAATCAATCTTTTCTTAGTTCTATACCTAAATTATTGAGAATATGAGTCTCACATTTAAGTTATTACTTAGTAGTTTGAGAAACACATTTTTCTCTTTTATTACACTCTTATATCATGGTGTATGTACGTCTACACCTACTCCTTTAACTTTACCTCATGTTATATTTATGTCCTTTTAACTTTGAGTGTGCATAAGTAGACACTTAAACTCGTATAAAATTGAACAAATAGACACATACACCCTATGTGGCATCTTACATGGTAATTTACGTTCTACATGGTGTCTTGTGTGTATTGTACCATGTAAGATTAATGTGTCAATCTGTTCAACTTTATACAAGTTTAAGTGTCTATTTTTGCACAGCCCAAAGTTGGATCGTATACATGTTAAATGATGCCAAGTTAAAGGGCATATACATGTATTATGCCATAAAAATCATGGACAAAACATTCTATCTTGGCAAAAATTAAATAGATTATTAATATCAATTAAAATAATAGACAAAATTATATTTCACCTTAACAAAAAAATTTAATAAATTATAGTATTAGTTAAAGTTAAAAGTAAAGGCATTACTATATATCCAAAAAATTTATAAAATAAAGTATAAAATATTTTTCTTACTTTTACTCCAGACTCCACCACTTCCTCTCACCCCACCCCCTCCCCACCACAATTTTTTAGTTTTTTTAAAAGAAAAATAAAATTCCATTTGTAAAAGTCTTTTTGAAAATATCTTACTTCCTCTCCCCCTAACTCTCCAAATAATAATTTAGATATTATTTTATTTTTTTAAAAAAAAATTCTACCTCACTCCACCTAACACAATACTTTCAATTATTTCCTCATATTGTGTTATATATAATATTTTTCTAAAAATATATGTACATATCTAGCACAAAACTAAAAAAATATATCTAAAAAAGAAAAAAGAGAGTAGACGGTGTATGGTAGAATTTCTTTTTTAATAAAAAAATAAAAATAATATCAATCTTTTTTAGGAAGAAGTGAGGAAGGGGGTGAAGTTTGGAATTTTTTTAAAAAAAATTAAAAGAATAAAAGGGTGGGGTAAGAAAAAAATTCTAGATTTTATCTTTTTTTTTAAAAAAATTCTTCTGGGATAGTAATACTTTAATGTTTATCTTTCAATTAATATTAATGATTTACTTAAAAAAAAATTAAGACATATTTTATTTATGTGGCGAAGTTTTGCTGGTAAAACAGAAGGTAGGCATACTATATAAATGTGCTCTTTAACTTGGATTTATTTTACATGTATGTCCCTCCAAGTTTGGATATGTATAACTTAAACTTGTATAAAGTTGAACAAGTAAATATATAAGTCCTACATGAAACAATACACGTAGGATACCATGTAGAACAAAAATGACATGTAGGATGTCATGTTAGACCTACATGTCTATTTGTTCAATTTTATACTAATTTGAGCGTCTACTTTTATATATCCAAAGTTAAAGAATATAAATGTGATTTAAAACTAAGTTAAAATACATATATGCATAAAGTGTATTACACTCCCAATAGTTTAAACTCCATGCGCAATAGATAGTAATAACAAGTTCAACTACATGCTGCAGTTGATTAATCATGGAGTTAGTTGTTCAGTAGTGGAGAAGATGAAAGACGAGACTCAAAAATTCTTCGATCTGCCATTAGAAGAGAAGAAAAAGTTTGAAAAATCTTCAGGAGATACAGATGGATTTGGACAGCTATTCGTCGTCTCTGATGAACAAAAGCTTGACTGGGCTGATCTCTTTTACTTGAAGACTTCACCCACATATTTGCGAAAGCCTGTGTTTTCCAAGCTTTACCTTTCACTTAGGTACATACCAAACGTTGTTTGCGCCCTTTTTAACGCTTGAAAATAAGTAAGAGAATCGCTTATTAATGCGTATAAATGTAGAGAGACGATTGAAGAGTACGCGGATGAAATAAAGAAGCTAAGCATGAGAGTATTGGAAACGTTGGGTAAAGCTTTGGGGATTGATGAAGATGAAGTGAAGAGTGTTTTCAAAGAAGGAATGCAATCGATGAGGATGAATTACTATCCACCATGTCCACAACCAGAGAAAGTGATGGGACTTACTCCTCATTCAGATGCAACAGGCCTTA</genome_strand>
        <mrna_strand>TTGAGCTTAACATGTTGCGCTTAGCAGCTAAAGATTGGGGTTTCTTTCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATTAATCATGGAGTTAGTTGTTCAGTAGTGGAGAAGATGAAAGACGAGACTCAAAAATTCTTCGATCTGCCATTAGAAGAGAAGAAAAAGTTTGAAAAATCTTCAGGAGATACAGATGGATTTGGACAGCTATTCATCATCTCTGATGAACAAAAGCTTGACTGGGCTGATCTCTTTTACTTGAATACTTCACCCACATATTTGCGAAAGCCTGTGTTTTCCAAGCTTTACCTTTCACTTAG.................................................................................AGAGACGATTGAAGAGTACGCGGATGAAATAAAGAAACTAAGCATGAGAGTATTGAAAACGTTGGGTAAAGCTTTGGGGATTGATGAAGATGAAGTGAAGAGTGTTTTCGAAGAAGGAATGCAATCGATGAGAATGAATTACTATCCACCATGTCCACAACCAGAGAAAGTGATGGGACTTACTCCTGATTCAAATGCAACAGGCCTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E613176" ref_strand="+" ref_description="SGN-E613176 [62947]">
      <seq>tatggaagaaatagaagttaagtacatggaagttccttctgtccaggaactggccaagaagaaactcgtgacgattccatcgcgatacatacgtgatgatcaagaccgttcaattgcaacatcaaattataagcaagttccagtaattgatatgcaacgattgatcaactctaacgatcatgactccatgaatctcgagcttaataagttgcactttgcagctaaagattggggtttctttcagttaattaatcatggagttagttgttcagtggtggaaaagatgaaacatgaaactcaaaagttcttcgatctgccattagaagagaagaagaagtttgaacaatcgtcaggagatacagatggatttggacagttgttcgttgtctctgatgaacaaaagcttgactgggctgatctcttttacttgaagaccgcaccgacatatttgcggaagcctatattttcaaagctttatctttcacttagagagacgattgaagagtacgcggatgaaataaaaacgctaagcatgaaagtattggaaatgttgggtaaagcttggggattgatgaggaagaagtgaagagtctttttgaagaaggaatgccatcaattgaggatgaattactatccaccatgtccacaaccagacaaagtgatgggacttacttcctcatttcagatgcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="-" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="3636" stop="377"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3336" g_stop="3093" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="244" r_length="244" r_score="0.926"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="3092" i_stop="1203" i_length="1890">
            <donor d_prob="0.986" d_score="0.94"/>
            <acceptor a_prob="0.589" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="1202" g_stop="958" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="245" r_stop="489" r_length="245" r_score="0.914"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="957" i_stop="877" i_length="81">
            <donor d_prob="0.717" d_score="0.88"/>
            <acceptor a_prob="0.882" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="876" g_stop="677" g_length="200"/>
          <reference_exon_boundary r_type="cDNA" r_start="490" r_stop="691" r_length="202" r_score="0.905"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="-" ref_id="SGN-E613176" ref_strand="+">
        <total_alignment_score>0.916</total_alignment_score>
        <cumulative_length_of_scored_exons>689</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E613176" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3336" e_stop="3093"/>
          <exon e_start="1202" e_stop="958"/>
          <exon e_start="876" e_stop="677"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATGAGAGACATAGAAGTCAAGTACATGGAAGTTCCTTCTGTACAGGAACTGGCCAAGAAGAAACTCGTGTCGATTCCATCGCGATACGTACGCGATGATCAAGACCGTTCAATTGCATCATCAATTTATAAAGAAGTCCCAGTAATTGATATGCAACGATTGATCAACTTTAATGATCATGACTCCATGAATCTTGAGCTTAACAAGTTGCACTTAGCAGCTAAAGATTGGGGTTTCTTTCAGGTACATATAGATCAATAATATACTAGCAAAGATATATCAAGTGACTTTTCTCATACAAAATATCAATTAAAAGAGCATATGTATTCTTTAGTTTAAGCTTTCTAAATAAAATTATCACATACTTTAATATGATATCAGTTTTTAAGATTGTTTGGTTCAAAACGGTAAAGCCCATTGGCCTTGAAGTAGTCCGTGGTTCAGCCAAAACGGACCATATATAGGTTGTATTTGCATATTTTTACTTTGTCTCGACTTTTATGATACAATTTTTTTCAGTGTCAAAAACACCTAAATCAATCTTTTCTTAGTTCTATACCTAAATTATTGAGAATATGAGTCTCACATTTAAGTTATTACTTAGTAGTTTGAGAAACACATTTTTCTCTTTTATTACACTCTTATATCATGGTGTATGTACGTCTACACCTACTCCTTTAACTTTACCTCATGTTATATTTATGTCCTTTTAACTTTGAGTGTGCATAAGTAGACACTTAAACTCGTATAAAATTGAACAAATAGACACATACACCCTATGTGGCATCTTACATGGTAATTTACGTTCTACATGGTGTCTTGTGTGTATTGTACCATGTAAGATTAATGTGTCAATCTGTTCAACTTTATACAAGTTTAAGTGTCTATTTTTGCACAGCCCAAAGTTGGATCGTATACATGTTAAATGATGCCAAGTTAAAGGGCATATACATGTATTATGCCATAAAAATCATGGACAAAACATTCTATCTTGGCAAAAATTAAATAGATTATTAATATCAATTAAAATAATAGACAAAATTATATTTCACCTTAACAAAAAAATTTAATAAATTATAGTATTAGTTAAAGTTAAAAGTAAAGGCATTACTATATATCCAAAAAATTTATAAAATAAAGTATAAAATATTTTTCTTACTTTTACTCCAGACTCCACCACTTCCTCTCACCCCACCCCCTCCCCACCACAATTTTTTAGTTTTTTTAAAAGAAAAATAAAATTCCATTTGTAAAAGTCTTTTTGAAAATATCTTACTTCCTCTCCCCCTAACTCTCCAAATAATAATTTAGATATTATTTTATTTTTTTAAAAAAAAATTCTACCTCACTCCACCTAACACAATACTTTCAATTATTTCCTCATATTGTGTTATATATAATATTTTTCTAAAAATATATGTACATATCTAGCACAAAACTAAAAAAATATATCTAAAAAAGAAAAAAGAGAGTAGACGGTGTATGGTAGAATTTCTTTTTTAATAAAAAAATAAAAATAATATCAATCTTTTTTAGGAAGAAGTGAGGAAGGGGGTGAAGTTTGGAATTTTTTTAAAAAAAATTAAAAGAATAAAAGGGTGGGGTAAGAAAAAAATTCTAGATTTTATCTTTTTTTTTAAAAAAATTCTTCTGGGATAGTAATACTTTAATGTTTATCTTTCAATTAATATTAATGATTTACTTAAAAAAAAATTAAGACATATTTTATTTATGTGGCGAAGTTTTGCTGGTAAAACAGAAGGTAGGCATACTATATAAATGTGCTCTTTAACTTGGATTTATTTTACATGTATGTCCCTCCAAGTTTGGATATGTATAACTTAAACTTGTATAAAGTTGAACAAGTAAATATATAAGTCCTACATGAAACAATACACGTAGGATACCATGTAGAACAAAAATGACATGTAGGATGTCATGTTAGACCTACATGTCTATTTGTTCAATTTTATACTAATTTGAGCGTCTACTTTTATATATCCAAAGTTAAAGAATATAAATGTGATTTAAAACTAAGTTAAAATACATATATGCATAAAGTGTATTACACTCCCAATAGTTTAAACTCCATGCGCAATAGATAGTAATAACAAGTTCAACTACATGCTGCAGTTGATTAATCATGGAGTTAGTTGTTCAGTAGTGGAGAAGATGAAAGACGAGACTCAAAAATTCTTCGATCTGCCATTAGAAGAGAAGAAAAAGTTTGAAAAATCTTCAGGAGATACAGATGGATTTGGACAGCTATTCGTCGTCTCTGATGAACAAAAGCTTGACTGGGCTGATCTCTTTTACTTGAAGACTTCACCCACATATTTGCGAAAGCCTGTGTTTTCCAAGCTTTACCTTTCACTTAGGTACATACCAAACGTTGTTTGCGCCCTTTTTAACGCTTGAAAATAAGTAAGAGAATCGCTTATTAATGCGTATAAATGTAGAGAGACGATTGAAGAGTACGCGGATGAAATAAAGAAGCTAAGCATGAGAGTATTGGAAACGTTGGGTAAAGCTTTGGGGATTGATGAAGATGAAGTGAAGAGTGTTTTCAAAGAAGGAATGCAATCGA-TGAGGATGAATTACTATCCACCATGTCCACAACCAGAGAAAGTGATGGGACTTAC-TCCTCA-TTCAGATGCAA</genome_strand>
        <mrna_strand>TATGGAAGAAATAGAAGTTAAGTACATGGAAGTTCCTTCTGTCCAGGAACTGGCCAAGAAGAAACTCGTGACGATTCCATCGCGATACATACGTGATGATCAAGACCGTTCAATTGCAACATCAAATTATAAGCAAGTTCCAGTAATTGATATGCAACGATTGATCAACTCTAACGATCATGACTCCATGAATCTCGAGCTTAATAAGTTGCACTTTGCAGCTAAAGATTGGGGTTTCTTTCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAATTAATCATGGAGTTAGTTGTTCAGTGGTGGAAAAGATGAAACATGAAACTCAAAAGTTCTTCGATCTGCCATTAGAAGAGAAGAAGAAGTTTGAACAATCGTCAGGAGATACAGATGGATTTGGACAGTTGTTCGTTGTCTCTGATGAACAAAAGCTTGACTGGGCTGATCTCTTTTACTTGAAGACCGCACCGACATATTTGCGGAAGCCTATATTTTCAAAGCTTTATCTTTCACTTAG.................................................................................AGAGACGATTGAAGAGTACGCGGATGAAATAAAAACGCTAAGCATGAAAGTATTGGAAATGTTGGGTAAAGC-TTGGGGATTGATGAGGAAGAAGTGAAGAGTCTTTTTGAAGAAGGAATGCCATCAATTGAGGATGAATTACTATCCACCATGTCCACAACCAGACAAAGTGATGGGACTTACTTCCTCATTTCAGATGCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E689869" ref_strand="+" ref_description="SGN-E689869 [LH_Ea02A11]">
      <seq>cgtggaacaatactcaacagcactgaaggaacttgctatgaaaattctgtacgtaatggcaagagctttagggatgaaaacagaggatatgaatgtattatttgaacaagacgggacacaaatgatgagaataaattattaccctccttgtcctcaaccagaccgtgtaatggggttatgccctcatacggatgctattggtctagctatattacttcaggttaatgaaactgagggtcttcaaattaagaaagatggagcttggattccggttccatatcttcctgatgcctttgttgtcaacattggagacattctagagattgtgacaaatggaatttacaagagcattgaacatcgagccatcgttaatgaggataaggagaggatctctattgctacattttttagccccaaattggacggagatttaggtccagcaccaagtctcctcactcctcgatcccctgcaaaatataggaggattggagtggccgattacttcaaaggatttttttctcgagagctccatggaaaatcatacctacatactctaaaaactggaaatggagatcatcggagcaattgatcaatgttgcattttattccgcttgtttaataattattgtagcaatggtggtctgtttagttgtatgagctatctcatgtcatgtaaaaggttgcagaagaacagttattgcttatatttatattcaaaaccattaagaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="-" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="18219" stop="16842"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17921" g_stop="17587" g_length="335"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="336" r_length="336" r_score="0.940"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="17586" i_stop="17525" i_length="62">
            <donor d_prob="0.000" d_score="0.82"/>
            <acceptor a_prob="1.000" a_score="0.62"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="17524" g_stop="17134" g_length="391"/>
          <reference_exon_boundary r_type="cDNA" r_start="337" r_stop="738" r_length="402" r_score="0.870"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="-" ref_id="SGN-E689869" ref_strand="+">
        <total_alignment_score>0.902</total_alignment_score>
        <cumulative_length_of_scored_exons>726</cumulative_length_of_scored_exons>
        <coverage percentage="0.984" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E689869" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17921" e_stop="17587"/>
          <exon e_start="17524" e_stop="17134"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTGGAACAATACTCAAGAGCACTGAAGGAACTTGCTATGAAAATTCTGTACGTAATGGCCAGAGCTTTAGGGATGAAAACAGAGGATATGAATGTATTATTTGAACAAGACGGGACACAAATGATGAGAATAAATTATTATCCTCCTTGTCCTCAACCAGAGCGCGTAATGGGGTTATGCCCCCATACTGATGCTATTGGTCTAGCTATATTACTTCAGGTTAATGAAACGGAAGGTCTTCAAATTAAGAAAGATGGAGCTTGGATTCCGGTTCCATATCTTCCTGATGCCTTTGTTGTCAACATTGGAGATATTTTAGAG-GTGAGATATATGTGTGTTTAGTATGATACAAGTCAATTTGTGGGTAAAGCTCTGTTAATTTTGTTTTTTTTGCAGATTGTGACAAATGGAATTTACA-AGAG-CATTGATCATGGGGATAAGGAGAGGATCTCTATTGCTACATTTTTTAGCCCCAAATTGGACGGAGATTTAGGTCCAGCACCAAGTCTCCTCA-----C--T--CCT-CAAAATATAGGAGGATTGGAGTGGCCGATTACTTCAAAGGATTTTTTTCTCGAGAGCTCCATGGAAAATCATACCTACATACTCTAAAAATTGGAAATGGAGATCATGATAGCAATTGATCAATGTTGCATTTTATTCCGCTCGTATGATAATTATTGTAGCAATGGTGGTCTGTTTAGTTGTATGAGCTATCTCATGTGATGTAAAAGGTTGCAGAAGAACAGTTATTGCTTATATTTATATTTAAAACCATTAAGAAATGCATAAA</genome_strand>
        <mrna_strand>CGTGGAACAATACTCAACAGCACTGAAGGAACTTGCTATGAAAATTCTGTACGTAATGGCAAGAGCTTTAGGGATGAAAACAGAGGATATGAATGTATTATTTGAACAAGACGGGACACAAATGATGAGAATAAATTATTACCCTCCTTGTCCTCAACCAGACCGTGTAATGGGGTTATGCCCTCATACGGATGCTATTGGTCTAGCTATATTACTTCAGGTTAATGAAACTGAGGGTCTTCAAATTAAGAAAGATGGAGCTTGGATTCCGGTTCCATATCTTCCTGATGCCTTTGTTGTCAACATTGGAGACATTCTAGAGATTGTGACAAATGG..............................................................AAT-TTACAAGAGCATTGAACATCGAGCCATCGTTAATGAGGATAAGGAGAGGATCTCTATTGCTACATTTTTTAGCCCCAAATTGGACGGAGATTTAGGTCCAGCACCAAGTCTCCTCACTCCTCGATCCCCTGCAAAATATAGGAGGATTGGAGTGGCCGATTACTTCAAAGGATTTTTTTCTCGAGAGCTCCATGGAAAATCATACCTACATACTCTAAAAACTGGAAATGGAGATCATCGGAGCAATTGATCAATGTTGCATTTTATTCCGCTTGTTTAATAATTATTGTAGCAATGGTGGTCTGTTTAGTTGTATGAGCTATCTCATGTCATGTAAAAGGTTGCAGAAGAACAGTTATTGCTTATATTTATATTCAAAACCATTAAGAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E546127" ref_strand="+" ref_description="SGN-E546127 [TUS-69-F8]">
      <seq>cgagtttttttttttttttttaattcagcaacatatttttaccctctatgcatttcttaatggttttgaatataaatataagcaataactgttcttctgcaaccttttacatgacatgagatagctaatacaactaaacagaccaccattgctacaataattattatacgagcggaataaaatgcaacattgatcaattgctccgatgatctccatttccaatttttagagtatgtaggtatgattttccatggagctctcgagaaaaaaatcctttgaagtaatcggccactccaatcctcctatattttgcaggggatcgaggagtgaggagacttggtgctggacctaaatctccgtccaatttggggcttaaaaatgtagcaatagagatcctctccttatcctcattaacgatggctcgatgttcaatgctcttgtaaattccatttgtcacaatctctagaatgtctccaatgttgacaacaaaggcatcaggaagatatggaaccggaatccaagctccatctttcttaatttgaagaccctcagtttcattaacctgaagtaatatagctagaccaatagcatccgtatgagggcataaccccattacgcgctctggttgaggacaaggaggataataatttattctcatcatttgtgtcccgtcttgttcaaataatacattcatatcctctgttctcatccctaaagctcttgccattacgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="+" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="16782" stop="18171"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17134" g_stop="17503" g_length="370"/>
          <reference_exon_boundary r_type="cDNA" r_start="45" r_stop="424" r_length="380" r_score="0.900"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="17504" i_stop="17560" i_length="57">
            <donor d_prob="0.905" d_score="0.84"/>
            <acceptor a_prob="0.000" a_score="0.57"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="17561" g_stop="17871" g_length="311"/>
          <reference_exon_boundary r_type="cDNA" r_start="425" r_stop="732" r_length="308" r_score="0.913"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="21" polyA_stop="4"/>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="+" ref_id="SGN-E546127" ref_strand="+">
        <total_alignment_score>0.906</total_alignment_score>
        <cumulative_length_of_scored_exons>681</cumulative_length_of_scored_exons>
        <coverage percentage="0.930" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E546127" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17134" e_stop="17503"/>
          <exon e_start="17561" e_stop="17871"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTATGCATTTCTTAATGGTTTTAAATATAAATATAAGCAATAACTGTTCTTCTGCAACCTTTTACATCACATGAGATAGCTCATACAACTAAACAGACCACCATTGCTACAATAATTATCATACGAGCGGAATAAAATGCAACATTGATCAATTGCTATCATGATCTCCATTTCCAATTTTTAGAGTATGTAGGTATGATTTTCCATGGAGCTCTCGAGAAAAAAATCCTTTGAAGTAATCGGCCACTCCAATCCTCCTATA-TTT--------T-GAGGAGTGAGGAGACTTGGTGCTGGACCTAAATCTCCGTCCAATTTGGGGCTAAAAAATGTAGCAATAGAGATCCTCTCCTTATCCCCATGATCAAT-GCTCTTGTAAATTCCATTTGTCACAATCTGCAAAAAAAACAAAATTAACAGAGCTTTACCCACAAATTGACTTGTATCATACTAAACACACATATATCTC-ACCTCTAAAATATCTCCAATGTTGACAACAAAGGCATCAGGAAGATATGGAACCGGAATCCAAGCTCCATCTTTCTTAATTTGAAGACCTTCCGTTTCATTAACCTGAAGTAATATAGCTAGACCAATAGCATCAGTATGGGGGCATAACCCCATTACGCGCTCTGGTTGAGGACAAGGAGGATAATAATTTATTCTCATCATTTGTGTCCCGTCTTGTTCAAATAATACATTCATATCCTCTGTTTTCATCCCTAAAGCTCTGGCCATTACGT</genome_strand>
        <mrna_strand>TCTATGCATTTCTTAATGGTTTTGAATATAAATATAAGCAATAACTGTTCTTCTGCAACCTTTTACATGACATGAGATAGCTAATACAACTAAACAGACCACCATTGCTACAATAATTATTATACGAGCGGAATAAAATGCAACATTGATCAATTGCTCCGATGATCTCCATTTCCAATTTTTAGAGTATGTAGGTATGATTTTCCATGGAGCTCTCGAGAAAAAAATCCTTTGAAGTAATCGGCCACTCCAATCCTCCTATATTTTGCAGGGGATCGAGGAGTGAGGAGACTTGGTGCTGGACCTAAATCTCCGTCCAATTTGGGGCTTAAAAATGTAGCAATAGAGATCCTCTCCTTATCCTCATTAACGATGGCTC-G.........................................................ATGTTCA-ATG-CTC-TTGTAAATTC-CATTTGTCACAATCTCTAGAATGTCTCCAATGTTGACAACAAAGGCATCAGGAAGATATGGAACCGGAATCCAAGCTCCATCTTTCTTAATTTGAAGACCCTCAGTTTCATTAACCTGAAGTAATATAGCTAGACCAATAGCATCCGTATGAGGGCATAACCCCATTACGCGCTCTGGTTGAGGACAAGGAGGATAATAATTTATTCTCATCATTTGTGTCCCGTCTTGTTCAAATAATACATTCATATCCTCTGTTCTCATCCCTAAAGCTCTTGCCATTACGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E549322" ref_strand="+" ref_description="SGN-E549322 [TUS-69-F15](-)">
      <seq>aggaacttgctatgaaaattctgtacgtaatggcaagagctttagggatgagaacagaggatatgaatgtattatttgaacaagacgggacacaaatgatgagaataaattattatcctccttgtcctcaaccagagcgcgtaatggggttatgccctcatacggatgctattggtctagctatattacttcaggttaatgaaactgagggtcttcaaattaagaaagatggagcttggattccggttccatattttcctgatgcctttgttgtcaacattggagacattttagagattgtgacaaatggaatttacaagagcattgaacatcgagccatcgttaatgaggataaggaggggatctctattgctacatttttaagccccaaattggacggagatttaggtccagcaccaagtttcctcactcctggatcccctgcaaaatataggaggattggagtggccgattacttcaaaggatttttttctcgagagctccatggaaaatcatacctacatactttaaaaattggaaatggagatcatcggagcaattgatcaatgttgcattttattccgctcgtataataattattgtagcaatggtggtctgtttagttgtattagctatctcatgtcatgtaaaaggttgcagaagaacagttattgcttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="-" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="18195" stop="16866"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17895" g_stop="17587" g_length="309"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="310" r_length="310" r_score="0.951"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="17586" i_stop="17525" i_length="62">
            <donor d_prob="0.000" d_score="0.84"/>
            <acceptor a_prob="1.000" a_score="0.62"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="17524" g_stop="17169" g_length="356"/>
          <reference_exon_boundary r_type="cDNA" r_start="311" r_stop="677" r_length="367" r_score="0.865"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="678" polyA_stop="725"/>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="-" ref_id="SGN-E549322" ref_strand="+">
        <total_alignment_score>0.905</total_alignment_score>
        <cumulative_length_of_scored_exons>665</cumulative_length_of_scored_exons>
        <coverage percentage="0.917" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E549322" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17895" e_stop="17587"/>
          <exon e_start="17524" e_stop="17169"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGAACTTGCTATGAAAATTCTGTACGTAATGGCCAGAGCTTTAGGGATGAAAACAGAGGATATGAATGTATTATTTGAACAAGACGGGACACAAATGATGAGAATAAATTATTATCCTCCTTGTCCTCAACCAGAGCGCGTAATGGGGTTATGCCCCCATACTGATGCTATTGGTCTAGCTATATTACTTCAGGTTAATGAAACGGAAGGTCTTCAAATTAAGAAAGATGGAGCTTGGATTCCGGTTCCATATCTTCCTGATGCCTTTGTTGTCAACATTGGAGATATTTTAGAG-GTGAGATATATGTGTGTTTAGTATGATACAAGTCAATTTGTGGGTAAAGCTCTGTTAATTTTGTTTTTTTTGCAGATTGTGACAAATGGAATTTACA-AGAG-CATTGATCATGGGGATAAGGAGAGGATCTCTATTGCTACATTTTTTAGCCCCAAATTGGACGGAGATTTAGGTCCAGCACCAAG--T-CTC-CT-C---A-CTCCT-CAAAATATAGGAGGATTGGAGTGGCCGATTACTTCAAAGGATTTTTTTCTCGAGAGCTCCATGGAAAATCATACCTACATACTCTAAAAATTGGAAATGGAGATCATGATAGCAATTGATCAATGTTGCATTTTATTCCGCTCGTATGATAATTATTGTAGCAATGGTGGTCTGTTTAGTTGTATGAGCTATCTCATGTGATGTAAAAGGTTGCAGAAGAACAGTTATTGCTT</genome_strand>
        <mrna_strand>AGGAACTTGCTATGAAAATTCTGTACGTAATGGCAAGAGCTTTAGGGATGAGAACAGAGGATATGAATGTATTATTTGAACAAGACGGGACACAAATGATGAGAATAAATTATTATCCTCCTTGTCCTCAACCAGAGCGCGTAATGGGGTTATGCCCTCATACGGATGCTATTGGTCTAGCTATATTACTTCAGGTTAATGAAACTGAGGGTCTTCAAATTAAGAAAGATGGAGCTTGGATTCCGGTTCCATATTTTCCTGATGCCTTTGTTGTCAACATTGGAGACATTTTAGAGATTGTGACAAATGG..............................................................AAT-TTACAAGAGCATTGAACATCGAGCCATCGTTAATGAGGATAAGGAGGGGATCTCTATTGCTACATTTTTAAGCCCCAAATTGGACGGAGATTTAGGTCCAGCACCAAGTTTCCTCACTCCTGGATCCCCTGCAAAATATAGGAGGATTGGAGTGGCCGATTACTTCAAAGGATTTTTTTCTCGAGAGCTCCATGGAAAATCATACCTACATACTTTAAAAATTGGAAATGGAGATCATCGGAGCAATTGATCAATGTTGCATTTTATTCCGCTCGTATAATAATTATTGTAGCAATGGTGGTCTGTTTAGTTGTATTAGCTATCTCATGTCATGTAAAAGGTTGCAGAAGAACAGTTATTGCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E690163" ref_strand="+" ref_description="SGN-E690163 [LH_Ea02M17]">
      <seq>cgttacaatataattttatcgaccacacacaatggtctttcaatcctagataacgattttgctagcaaaaaagaaacatgttgatgatggaagaagcgaggtcgagaaagctaggtggctctttgaaagttcctaacgttcaggagctggcaaaacaacaactagcaggcgttccgtcgcgatatattcgtgttaacgatgacgaaaatcaattgtgtaattcttccatattattgcctcatgaattagctccagttattgacatgaaaaaactgctcaaaataattaaagacgatgatacagagcttaacaggtttcatcttgcttgcaaagaatggggatttttccagttggtgaatcacggagtgagttcatcattgatggagaaagtgaagtcagaaatcagagcatttttcgatctaccaatggaagagaagaagaaatttgagcaagaggaaggagatatcgaaggatacggacaagcatttgttgtatctgaagaacaaaagctagactggggtgacatgctttacatgatcactcttcctactcatttgcgaaaacctcacttgtttccgaagcttcccgcctcactcagggatgcattggaacaatactcaacagcactgaaggaacttgctatgaaaattctgtacgtaatggcaagagctttagggatgaaaacagaggatatgaatgtattatttgaacaagacgggacacaaatgatgagaataaattattaccctccttgtcctcaaccagaccgtgtaatggggttatgccctcatacggatgctattggtctagctatattacttcaggttaatgaaactgagggtcttcaaattaagaaagatggagcttggattccgggttccatatcttccctgatgcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="-" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="18975" stop="17330"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18678" g_stop="18328" g_length="351"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="350" r_length="350" r_score="0.934"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18327" i_stop="18233" i_length="95">
            <donor d_prob="0.992" d_score="0.94"/>
            <acceptor a_prob="0.995" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18232" g_stop="17985" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="351" r_stop="598" r_length="248" r_score="0.923"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="17984" i_stop="17928" i_length="57">
            <donor d_prob="0.997" d_score="0.92"/>
            <acceptor a_prob="0.970" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="17927" g_stop="17630" g_length="298"/>
          <reference_exon_boundary r_type="cDNA" r_start="599" r_stop="898" r_length="300" r_score="0.956"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="-" ref_id="SGN-E690163" ref_strand="+">
        <total_alignment_score>0.939</total_alignment_score>
        <cumulative_length_of_scored_exons>897</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E690163" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18678" e_stop="18328"/>
          <exon e_start="18232" e_stop="17985"/>
          <exon e_start="17927" e_stop="17630"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGTACAATAAAATTTTATCGACTACACACAATAATCTTTCAATCCTAGATAATGATTTTGCTAAAAAAAAAAAAATACAAGTTGATGATGGAAGAAGCGAGGTCGAGAAAGCTAGGTGGCTCTTTGAAAGTTTCTAACGTTCAGGAGCTGGCAAAACAACAACTAGCAGGTGTTCCGTCGCGATATATTCGTGTTAATGATGACGAAAATCAATTGTATAATTCGTCCATATTATTGCCTCATGAATTAGCTCCAGTTATTGACATGAAAAAACTGCTCAAAATAATTAAAGACGGTGATACAGAGCTTAACAGATTTCATCTTGCTTGCAAAGAA-GGGGATTTTTCCAGGTTACGTTTCATAGATCAAACACTCTTCATTATGCTCCATAACTACTTTTTCTCAGTTAGTTTAGCAAAAATATATGTCTAATTAAATTGCGCAGTTGGTGAATCACGGAGTGAGTTCATCATTGATGGAGAAAGTGAAATCAGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGACGAAATTCGAGCAAGAAGAGGGAGATCTCGAAGGATACGGGCAAGCATTTGTTGTATCTGAAGAGAAAAAGTTAGATTGGGCTGATATACTTTACATGATCACTCTCCCTACTCATTTGCGAAAACCTCACTTGTTTCCAAAGCTTCCTGCCTCGTTCAGGTACGATAATATATAACTGAGTTTACGATTAAATATTTAAATTCTTGGACCGTTAAGGGATGCATTGGAACAATACTCAAGAGCACTGAAGGAACTTGCTATGAAAATTCTGTACGTAATGGCCAGAGCTTTAGGGATGAAAACAGAGGATATGAATGTATTATTTGAACAAGACGGGACACAAATGATGAGAATAAATTATTATCCTCCTTGTCCTCAACCAGAGCGCGTAATGGGGTTATGCCCCCATACTGATGCTATTGGTCTAGCTATATTACTTCAGGTTAATGAAACGGAAGGTCTTCAAATTAAGAAAGATGGAGCTTGGATTCC-GGTTCCATATCTT-CCTGATGCC</genome_strand>
        <mrna_strand>CGTTACAATATAATTTTATCGACCACACACAATGGTCTTTCAATCCTAGATAACGATTTTGCT-AGCAAAAAAGAA-ACATGTTGATGATGGAAGAAGCGAGGTCGAGAAAGCTAGGTGGCTCTTTGAAAGTTCCTAACGTTCAGGAGCTGGCAAAACAACAACTAGCAGGCGTTCCGTCGCGATATATTCGTGTTAACGATGACGAAAATCAATTGTGTAATTCTTCCATATTATTGCCTCATGAATTAGCTCCAGTTATTGACATGAAAAAACTGCTCAAAATAATTAAAGACGATGATACAGAGCTTAACAGGTTTCATCTTGCTTGCAAAGAATGGGGATTTTTCCAG...............................................................................................TTGGTGAATCACGGAGTGAGTTCATCATTGATGGAGAAAGTGAAGTCAGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGAAGAAATTTGAGCAAGAGGAAGGAGATATCGAAGGATACGGACAAGCATTTGTTGTATCTGAAGAACAAAAGCTAGACTGGGGTGACATGCTTTACATGATCACTCTTCCTACTCATTTGCGAAAACCTCACTTGTTTCCGAAGCTTCCCGCCTCACTCAG.........................................................GGATGCATTGGAACAATACTCAACAGCACTGAAGGAACTTGCTATGAAAATTCTGTACGTAATGGCAAGAGCTTTAGGGATGAAAACAGAGGATATGAATGTATTATTTGAACAAGACGGGACACAAATGATGAGAATAAATTATTACCCTCCTTGTCCTCAACCAGACCGTGTAATGGGGTTATGCCCTCATACGGATGCTATTGGTCTAGCTATATTACTTCAGGTTAATGAAACTGAGGGTCTTCAAATTAAGAAAGATGGAGCTTGGATTCCGGGTTCCATATCTTCCCTGATGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E546098" ref_strand="+" ref_description="SGN-E546098 [TUS-69-E15]">
      <seq>gcaaagtaaaataaaattttatcgaccacacacaataatctttcaatcctagataacgattttgctagaaaaaaaaaatacatgttgatgatggaagaagcgaggtcgagaaagctaggtggctctttgaaagttcctaacgttcaggagctggcaaaacaacaactagcaggtgttccatcgcgatatattcgtgttaatgatgacgaaaatcaattgtataattcttccatattattgcctcgtgaattagctccagttattgacatgaaaaaactgctcaaaataattaaagacgatgatacagagcttaacaggtttcatcttgcttgcaaagaatggggatttttccagttggtgaatcacggagtgagttcatcattgatggagaaagtgaagtcagaaatcagagcatttttcgatctaccaatggaagagaagacgaaattcgagcaagaggaaggagatatcgaaggatacggacaagcatttgttgtatctgaagaacaaaagttagactggggtgacatgctttacatgatcactcttcctactcatttgcgaaaacctcacttgtttccgaagcttcctgcctcactcagggatgcattggaacaatactcaacagcactgaaggaacttgctatgaaaattctgtacgtaatggcaagagctttagggatgagaacagaggatatgaatgtattatttgaacaagacgggacacaaatgatgagaataattattatcctccttgtcctcaacagagcgcgtaatggggttattgcctcatacggatgctattggtcta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="-" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="18981" stop="17417"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18681" g_stop="18328" g_length="354"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="354" r_length="354" r_score="0.960"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18327" i_stop="18233" i_length="95">
            <donor d_prob="0.992" d_score="0.94"/>
            <acceptor a_prob="0.995" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18232" g_stop="17985" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="355" r_stop="602" r_length="248" r_score="0.940"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="17984" i_stop="17928" i_length="57">
            <donor d_prob="0.997" d_score="0.94"/>
            <acceptor a_prob="0.970" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="17927" g_stop="17717" g_length="211"/>
          <reference_exon_boundary r_type="cDNA" r_start="603" r_stop="811" r_length="209" r_score="0.957"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="-" ref_id="SGN-E546098" ref_strand="+">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>813</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E546098" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18681" e_stop="18328"/>
          <exon e_start="18232" e_stop="17985"/>
          <exon e_start="17927" e_stop="17717"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAAAGTACAATAAAATTTTATCGACTACACACAATAATCTTTCAATCCTAGATAATGATTTTGCTAAAAAAAAAAAAATACAAGTTGATGATGGAAGAAGCGAGGTCGAGAAAGCTAGGTGGCTCTTTGAAAGTTTCTAACGTTCAGGAGCTGGCAAAACAACAACTAGCAGGTGTTCCGTCGCGATATATTCGTGTTAATGATGACGAAAATCAATTGTATAATTCGTCCATATTATTGCCTCATGAATTAGCTCCAGTTATTGACATGAAAAAACTGCTCAAAATAATTAAAGACGGTGATACAGAGCTTAACAGATTTCATCTTGCTTGCAAAGAA-GGGGATTTTTCCAGGTTACGTTTCATAGATCAAACACTCTTCATTATGCTCCATAACTACTTTTTCTCAGTTAGTTTAGCAAAAATATATGTCTAATTAAATTGCGCAGTTGGTGAATCACGGAGTGAGTTCATCATTGATGGAGAAAGTGAAATCAGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGACGAAATTCGAGCAAGAAGAGGGAGATCTCGAAGGATACGGGCAAGCATTTGTTGTATCTGAAGAGAAAAAGTTAGATTGGGCTGATATACTTTACATGATCACTCTCCCTACTCATTTGCGAAAACCTCACTTGTTTCCAAAGCTTCCTGCCTCGTTCAGGTACGATAATATATAACTGAGTTTACGATTAAATATTTAAATTCTTGGACCGTTAAGGGATGCATTGGAACAATACTCAAGAGCACTGAAGGAACTTGCTATGAAAATTCTGTACGTAATGGCCAGAGCTTTAGGGATGAAAACAGAGGATATGAATGTATTATTTGAACAAGACGGGACACAAATGATGAGAATAAATTATTATCCTCCTTGTCCTCAACCAGAGCGCGTAATGGGGTTATGCCCCCATACTGATGCTATTGGTCTA</genome_strand>
        <mrna_strand>GCAAAGTAAAATAAAATTTTATCGACCACACACAATAATCTTTCAATCCTAGATAACGATTTTGCT-AGAAAAAAAAAATACATGTTGATGATGGAAGAAGCGAGGTCGAGAAAGCTAGGTGGCTCTTTGAAAGTTCCTAACGTTCAGGAGCTGGCAAAACAACAACTAGCAGGTGTTCCATCGCGATATATTCGTGTTAATGATGACGAAAATCAATTGTATAATTCTTCCATATTATTGCCTCGTGAATTAGCTCCAGTTATTGACATGAAAAAACTGCTCAAAATAATTAAAGACGATGATACAGAGCTTAACAGGTTTCATCTTGCTTGCAAAGAATGGGGATTTTTCCAG...............................................................................................TTGGTGAATCACGGAGTGAGTTCATCATTGATGGAGAAAGTGAAGTCAGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGACGAAATTCGAGCAAGAGGAAGGAGATATCGAAGGATACGGACAAGCATTTGTTGTATCTGAAGAACAAAAGTTAGACTGGGGTGACATGCTTTACATGATCACTCTTCCTACTCATTTGCGAAAACCTCACTTGTTTCCGAAGCTTCCTGCCTCACTCAG.........................................................GGATGCATTGGAACAATACTCAACAGCACTGAAGGAACTTGCTATGAAAATTCTGTACGTAATGGCAAGAGCTTTAGGGATGAGAACAGAGGATATGAATGTATTATTTGAACAAGACGGGACACAAATGATGAGAAT-AATTATTATCCTCCTTGTCCTCAA-CAGAGCGCGTAATGGGGTTATTGCCTCATACGGATGCTATTGGTCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E546100" ref_strand="+" ref_description="SGN-E546100 [TUS-69-E16]">
      <seq>gcaaagtaaaataaaattttatcgaccacacacaataatctttcaatcctagataacgattttgctagaaaaaaaaaatacatgttgatgatggaagaagcgaggtcgagaaagctaggtggctctttgaaagttcctaacgttcaggagctggcaaaacaacaactagcaggtgttccatcgcgatatattcgtgttaatgatgacgaaaatcaattgtataattcttccatattattgcctcgtgaattagctccagttattgacatgaaaaaactgctcaaaataattaaagacgatgatacagagcttaacaggtttcatcttgcttgcaaagaatggggatttttccagttggtgaatcacggagtgagttcatcattgatggagaaagtgaagtcagaaatcagagcatttttcgatctaccaatggaagagaagacgaaattcgagcaagaggaaggagatatcgaaggatacggacaagcatttgttgtatctgaagaacaaaagttagactggggtgacatgctttacatgatcactcttcctactcatttgcgaaaacctcacttgtttccgaagcttcctgcctcactcagggatgcattggaacaatactcaacagcactgaaggaacttgctatgaaaattctgtacgtaatggcaagagctttanggatgagaacagaggatatgaatgtattattttgaacagacgggacancaatgatgagaataaatattatcctccttgtcctcaccagagcgcgtaatggggttatgcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="-" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="18981" stop="17440"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18681" g_stop="18328" g_length="354"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="354" r_length="354" r_score="0.960"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18327" i_stop="18233" i_length="95">
            <donor d_prob="0.992" d_score="0.94"/>
            <acceptor a_prob="0.995" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18232" g_stop="17985" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="355" r_stop="602" r_length="248" r_score="0.940"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="17984" i_stop="17928" i_length="57">
            <donor d_prob="0.997" d_score="0.94"/>
            <acceptor a_prob="0.970" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="17927" g_stop="17740" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="603" r_stop="788" r_length="186" r_score="0.936"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="-" ref_id="SGN-E546100" ref_strand="+">
        <total_alignment_score>0.948</total_alignment_score>
        <cumulative_length_of_scored_exons>790</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E546100" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18681" e_stop="18328"/>
          <exon e_start="18232" e_stop="17985"/>
          <exon e_start="17927" e_stop="17740"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAAAGTACAATAAAATTTTATCGACTACACACAATAATCTTTCAATCCTAGATAATGATTTTGCTAAAAAAAAAAAAATACAAGTTGATGATGGAAGAAGCGAGGTCGAGAAAGCTAGGTGGCTCTTTGAAAGTTTCTAACGTTCAGGAGCTGGCAAAACAACAACTAGCAGGTGTTCCGTCGCGATATATTCGTGTTAATGATGACGAAAATCAATTGTATAATTCGTCCATATTATTGCCTCATGAATTAGCTCCAGTTATTGACATGAAAAAACTGCTCAAAATAATTAAAGACGGTGATACAGAGCTTAACAGATTTCATCTTGCTTGCAAAGAA-GGGGATTTTTCCAGGTTACGTTTCATAGATCAAACACTCTTCATTATGCTCCATAACTACTTTTTCTCAGTTAGTTTAGCAAAAATATATGTCTAATTAAATTGCGCAGTTGGTGAATCACGGAGTGAGTTCATCATTGATGGAGAAAGTGAAATCAGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGACGAAATTCGAGCAAGAAGAGGGAGATCTCGAAGGATACGGGCAAGCATTTGTTGTATCTGAAGAGAAAAAGTTAGATTGGGCTGATATACTTTACATGATCACTCTCCCTACTCATTTGCGAAAACCTCACTTGTTTCCAAAGCTTCCTGCCTCGTTCAGGTACGATAATATATAACTGAGTTTACGATTAAATATTTAAATTCTTGGACCGTTAAGGGATGCATTGGAACAATACTCAAGAGCACTGAAGGAACTTGCTATGAAAATTCTGTACGTAATGGCCAGAGCTTTAGGGATGAAAACAGAGGATATGAATGTATTATTTGAACAAGACGGGACACAAATGATGAGAATAAATTATTATCCTCCTTGTCCTCAACCAGAGCGCGTAATGGGGTTATGCC</genome_strand>
        <mrna_strand>GCAAAGTAAAATAAAATTTTATCGACCACACACAATAATCTTTCAATCCTAGATAACGATTTTGCT-AGAAAAAAAAAATACATGTTGATGATGGAAGAAGCGAGGTCGAGAAAGCTAGGTGGCTCTTTGAAAGTTCCTAACGTTCAGGAGCTGGCAAAACAACAACTAGCAGGTGTTCCATCGCGATATATTCGTGTTAATGATGACGAAAATCAATTGTATAATTCTTCCATATTATTGCCTCGTGAATTAGCTCCAGTTATTGACATGAAAAAACTGCTCAAAATAATTAAAGACGATGATACAGAGCTTAACAGGTTTCATCTTGCTTGCAAAGAATGGGGATTTTTCCAG...............................................................................................TTGGTGAATCACGGAGTGAGTTCATCATTGATGGAGAAAGTGAAGTCAGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGACGAAATTCGAGCAAGAGGAAGGAGATATCGAAGGATACGGACAAGCATTTGTTGTATCTGAAGAACAAAAGTTAGACTGGGGTGACATGCTTTACATGATCACTCTTCCTACTCATTTGCGAAAACCTCACTTGTTTCCGAAGCTTCCTGCCTCACTCAG.........................................................GGATGCATTGGAACAATACTCAACAGCACTGAAGGAACTTGCTATGAAAATTCTGTACGTAATGGCAAGAGCTTTANGGATGAGAACAGAGGATATGAATGTATTATTTTGAACAGACGGGACANCAATGATGAGAATAAA-TATTATCCTCCTTGTCCTC-ACCAGAGCGCGTAATGGGGTTATGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E692332" ref_strand="+" ref_description="SGN-E692332 [LH_Ea08H02]">
      <seq>gtacaatataattttatcgaccacacacaatggtctttcaatcctagataacgattttgctagcaaaaaagaaacatgttgatgatggaagaagcgaggtcgagaaagctaggtggctctttgaaagttcctaacgttcaggagctggcaaaacaacaactagcaggcgttccgtcgcgatatattcgtgttaacgatgacgaaaatcaattgtgtaattcttccatattattgcctcatgaattagctccagttattgacatgaaaaaactgctcaaaataattaaagacgatgatacagagcttaacaggtttcatcttgcttgcaaagaatggggatttttccagttggtgaatcacggagtgagttcatcattgatggagaaagtgaagtcagaaatcagagcatttttcgatctaccaatggaagagaagaagaaatttgagcaagaggaaggagatatcgaaggatacggacaagcatttgttgtatctgaagaacaaaagctagactggggtgacatgctttacatgatcactcttcctactcatttgcgaaaacctcacttgtttccgaagcttcccgcctcactcagggatgcattggaacaatactcaacagcactgaaggaacttgctatgaaaattctgtacgtaatggcaagagctttagggatgaaaacagaggatatgaatgtattatttgaacaagacgggacacaaatgatgagaataaattattaccctccttgtcctcaacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="-" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="18976" stop="17463"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18676" g_stop="18328" g_length="349"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="348" r_length="348" r_score="0.943"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18327" i_stop="18233" i_length="95">
            <donor d_prob="0.992" d_score="0.94"/>
            <acceptor a_prob="0.995" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18232" g_stop="17985" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="349" r_stop="596" r_length="248" r_score="0.923"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="17984" i_stop="17928" i_length="57">
            <donor d_prob="0.997" d_score="0.92"/>
            <acceptor a_prob="0.970" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="17927" g_stop="17763" g_length="165"/>
          <reference_exon_boundary r_type="cDNA" r_start="597" r_stop="761" r_length="165" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="-" ref_id="SGN-E692332" ref_strand="+">
        <total_alignment_score>0.945</total_alignment_score>
        <cumulative_length_of_scored_exons>762</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E692332" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18676" e_stop="18328"/>
          <exon e_start="18232" e_stop="17985"/>
          <exon e_start="17927" e_stop="17763"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTACAATAAAATTTTATCGACTACACACAATAATCTTTCAATCCTAGATAATGATTTTGCTAAAAAAAAAAAAATACAAGTTGATGATGGAAGAAGCGAGGTCGAGAAAGCTAGGTGGCTCTTTGAAAGTTTCTAACGTTCAGGAGCTGGCAAAACAACAACTAGCAGGTGTTCCGTCGCGATATATTCGTGTTAATGATGACGAAAATCAATTGTATAATTCGTCCATATTATTGCCTCATGAATTAGCTCCAGTTATTGACATGAAAAAACTGCTCAAAATAATTAAAGACGGTGATACAGAGCTTAACAGATTTCATCTTGCTTGCAAAGAA-GGGGATTTTTCCAGGTTACGTTTCATAGATCAAACACTCTTCATTATGCTCCATAACTACTTTTTCTCAGTTAGTTTAGCAAAAATATATGTCTAATTAAATTGCGCAGTTGGTGAATCACGGAGTGAGTTCATCATTGATGGAGAAAGTGAAATCAGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGACGAAATTCGAGCAAGAAGAGGGAGATCTCGAAGGATACGGGCAAGCATTTGTTGTATCTGAAGAGAAAAAGTTAGATTGGGCTGATATACTTTACATGATCACTCTCCCTACTCATTTGCGAAAACCTCACTTGTTTCCAAAGCTTCCTGCCTCGTTCAGGTACGATAATATATAACTGAGTTTACGATTAAATATTTAAATTCTTGGACCGTTAAGGGATGCATTGGAACAATACTCAAGAGCACTGAAGGAACTTGCTATGAAAATTCTGTACGTAATGGCCAGAGCTTTAGGGATGAAAACAGAGGATATGAATGTATTATTTGAACAAGACGGGACACAAATGATGAGAATAAATTATTATCCTCCTTGTCCTCAACC</genome_strand>
        <mrna_strand>GTACAATATAATTTTATCGACCACACACAATGGTCTTTCAATCCTAGATAACGATTTTGCT-AGCAAAAAAGAA-ACATGTTGATGATGGAAGAAGCGAGGTCGAGAAAGCTAGGTGGCTCTTTGAAAGTTCCTAACGTTCAGGAGCTGGCAAAACAACAACTAGCAGGCGTTCCGTCGCGATATATTCGTGTTAACGATGACGAAAATCAATTGTGTAATTCTTCCATATTATTGCCTCATGAATTAGCTCCAGTTATTGACATGAAAAAACTGCTCAAAATAATTAAAGACGATGATACAGAGCTTAACAGGTTTCATCTTGCTTGCAAAGAATGGGGATTTTTCCAG...............................................................................................TTGGTGAATCACGGAGTGAGTTCATCATTGATGGAGAAAGTGAAGTCAGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGAAGAAATTTGAGCAAGAGGAAGGAGATATCGAAGGATACGGACAAGCATTTGTTGTATCTGAAGAACAAAAGCTAGACTGGGGTGACATGCTTTACATGATCACTCTTCCTACTCATTTGCGAAAACCTCACTTGTTTCCGAAGCTTCCCGCCTCACTCAG.........................................................GGATGCATTGGAACAATACTCAACAGCACTGAAGGAACTTGCTATGAAAATTCTGTACGTAATGGCAAGAGCTTTAGGGATGAAAACAGAGGATATGAATGTATTATTTGAACAAGACGGGACACAAATGATGAGAATAAATTATTACCCTCCTTGTCCTCAACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E546105" ref_strand="+" ref_description="SGN-E546105 [TUS-69-E19]">
      <seq>gcaaagtaaaataaaattttatcgaccacacacaataatctttcaatcctagataacgattttgctagaaaaaaaaaaacatgttgatgatggaagaagcgaggtcgagaaagctaggtggctctttgaaagttcctaacgttcaggagctggcaaaacaacaactagcaggtgttccatcgcgatatattcgtgttaatgatgacgaaaatcaattgtataattcttccatattattgcctcgtgaattagctccagttattgacatgaaaaaactgctcaaaataattaaagacgatgatacagagcttaacaggtttcatcttgcttgcaaagaatggggatttttccagttggtgaatcacggagtgagttcatcattgatggagaaagtgaagtcagaaatcagagcatttttcgatctaccaatggaagagaagacgaaattcgagcaagaggaaggagatatcgaaggatacggacaagcatttgttgtatctgaagaacaaaagttagactggggtgacatgctttacatgatcactcttcctactcatttgcgaaaacctcacttgtttccgaagcttcctgcctcactcagggatgcattggaacaatactcaacagcactgaaggaacttgctatgaaaattctgtacgtaatggcaagagctttagggatgagaacagaggatatgaatgttttatttgaacaagacgggacacaaatgatgagaataaattattatcctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="-" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="18981" stop="17476"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18681" g_stop="18328" g_length="354"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="353" r_length="353" r_score="0.958"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18327" i_stop="18233" i_length="95">
            <donor d_prob="0.992" d_score="0.94"/>
            <acceptor a_prob="0.995" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18232" g_stop="17985" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="354" r_stop="601" r_length="248" r_score="0.940"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="17984" i_stop="17928" i_length="57">
            <donor d_prob="0.997" d_score="0.94"/>
            <acceptor a_prob="0.970" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="17927" g_stop="17776" g_length="152"/>
          <reference_exon_boundary r_type="cDNA" r_start="602" r_stop="753" r_length="152" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="-" ref_id="SGN-E546105" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>754</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E546105" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18681" e_stop="18328"/>
          <exon e_start="18232" e_stop="17985"/>
          <exon e_start="17927" e_stop="17776"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAAAGTACAATAAAATTTTATCGACTACACACAATAATCTTTCAATCCTAGATAATGATTTTGCTAAAAAAAAAAAAATACAAGTTGATGATGGAAGAAGCGAGGTCGAGAAAGCTAGGTGGCTCTTTGAAAGTTTCTAACGTTCAGGAGCTGGCAAAACAACAACTAGCAGGTGTTCCGTCGCGATATATTCGTGTTAATGATGACGAAAATCAATTGTATAATTCGTCCATATTATTGCCTCATGAATTAGCTCCAGTTATTGACATGAAAAAACTGCTCAAAATAATTAAAGACGGTGATACAGAGCTTAACAGATTTCATCTTGCTTGCAAAGAA-GGGGATTTTTCCAGGTTACGTTTCATAGATCAAACACTCTTCATTATGCTCCATAACTACTTTTTCTCAGTTAGTTTAGCAAAAATATATGTCTAATTAAATTGCGCAGTTGGTGAATCACGGAGTGAGTTCATCATTGATGGAGAAAGTGAAATCAGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGACGAAATTCGAGCAAGAAGAGGGAGATCTCGAAGGATACGGGCAAGCATTTGTTGTATCTGAAGAGAAAAAGTTAGATTGGGCTGATATACTTTACATGATCACTCTCCCTACTCATTTGCGAAAACCTCACTTGTTTCCAAAGCTTCCTGCCTCGTTCAGGTACGATAATATATAACTGAGTTTACGATTAAATATTTAAATTCTTGGACCGTTAAGGGATGCATTGGAACAATACTCAAGAGCACTGAAGGAACTTGCTATGAAAATTCTGTACGTAATGGCCAGAGCTTTAGGGATGAAAACAGAGGATATGAATGTATTATTTGAACAAGACGGGACACAAATGATGAGAATAAATTATTATCCTC</genome_strand>
        <mrna_strand>GCAAAGTAAAATAAAATTTTATCGACCACACACAATAATCTTTCAATCCTAGATAACGATTTTGCT-AGAAAAAAAAAA-ACATGTTGATGATGGAAGAAGCGAGGTCGAGAAAGCTAGGTGGCTCTTTGAAAGTTCCTAACGTTCAGGAGCTGGCAAAACAACAACTAGCAGGTGTTCCATCGCGATATATTCGTGTTAATGATGACGAAAATCAATTGTATAATTCTTCCATATTATTGCCTCGTGAATTAGCTCCAGTTATTGACATGAAAAAACTGCTCAAAATAATTAAAGACGATGATACAGAGCTTAACAGGTTTCATCTTGCTTGCAAAGAATGGGGATTTTTCCAG...............................................................................................TTGGTGAATCACGGAGTGAGTTCATCATTGATGGAGAAAGTGAAGTCAGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGACGAAATTCGAGCAAGAGGAAGGAGATATCGAAGGATACGGACAAGCATTTGTTGTATCTGAAGAACAAAAGTTAGACTGGGGTGACATGCTTTACATGATCACTCTTCCTACTCATTTGCGAAAACCTCACTTGTTTCCGAAGCTTCCTGCCTCACTCAG.........................................................GGATGCATTGGAACAATACTCAACAGCACTGAAGGAACTTGCTATGAAAATTCTGTACGTAATGGCAAGAGCTTTAGGGATGAGAACAGAGGATATGAATGTTTTATTTGAACAAGACGGGACACAAATGATGAGAATAAATTATTATCCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E355767" ref_strand="+" ref_description="SGN-E355767 [cLHT-18-J17]">
      <seq>caaagtaaaataaaattttatcgaccacacacaataatctttcaatcctagataacgattttgctagaaaaaaaaaatacatgttgatgatggaagaagcgaggtcgagaaagctaggtggctctttgaaagttcctaacgttcaggagctggcaaaacaacaactagcaggtgttccatcgcgatatattcgtgttaatgatgacgaaaatcaattgtataattcttccatattattgcctcgtgaattagctccagttattgacatgaaaaaactgctcaaaataattaaagacgatgatacagagcttaacaggtttcatcttgcttgcaaagaatggggatttttccagttggtgaatcacggagtgagttcatcattgatggagaaagtgaagtcagaaatcacagcatttttcgatctaccaatggaagagaagacgaaattcgagcaagaggaaggagatatcgaaggatacggacaagcatttgttgtatctgaagaacaaaagttagactggggtgacatgctttacatgatcactcttcctactcatttgcgaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="-" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="18980" stop="17721"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18680" g_stop="18328" g_length="353"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="353" r_length="353" r_score="0.960"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18327" i_stop="18233" i_length="95">
            <donor d_prob="0.992" d_score="0.94"/>
            <acceptor a_prob="0.995" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18232" g_stop="18021" g_length="212"/>
          <reference_exon_boundary r_type="cDNA" r_start="354" r_stop="565" r_length="212" r_score="0.939"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="-" ref_id="SGN-E355767" ref_strand="+">
        <total_alignment_score>0.952</total_alignment_score>
        <cumulative_length_of_scored_exons>565</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E355767" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18680" e_stop="18328"/>
          <exon e_start="18232" e_stop="18021"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAGTACAATAAAATTTTATCGACTACACACAATAATCTTTCAATCCTAGATAATGATTTTGCTAAAAAAAAAAAAATACAAGTTGATGATGGAAGAAGCGAGGTCGAGAAAGCTAGGTGGCTCTTTGAAAGTTTCTAACGTTCAGGAGCTGGCAAAACAACAACTAGCAGGTGTTCCGTCGCGATATATTCGTGTTAATGATGACGAAAATCAATTGTATAATTCGTCCATATTATTGCCTCATGAATTAGCTCCAGTTATTGACATGAAAAAACTGCTCAAAATAATTAAAGACGGTGATACAGAGCTTAACAGATTTCATCTTGCTTGCAAAGAA-GGGGATTTTTCCAGGTTACGTTTCATAGATCAAACACTCTTCATTATGCTCCATAACTACTTTTTCTCAGTTAGTTTAGCAAAAATATATGTCTAATTAAATTGCGCAGTTGGTGAATCACGGAGTGAGTTCATCATTGATGGAGAAAGTGAAATCAGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGACGAAATTCGAGCAAGAAGAGGGAGATCTCGAAGGATACGGGCAAGCATTTGTTGTATCTGAAGAGAAAAAGTTAGATTGGGCTGATATACTTTACATGATCACTCTCCCTACTCATTTGCGAAA</genome_strand>
        <mrna_strand>CAAAGTAAAATAAAATTTTATCGACCACACACAATAATCTTTCAATCCTAGATAACGATTTTGCT-AGAAAAAAAAAATACATGTTGATGATGGAAGAAGCGAGGTCGAGAAAGCTAGGTGGCTCTTTGAAAGTTCCTAACGTTCAGGAGCTGGCAAAACAACAACTAGCAGGTGTTCCATCGCGATATATTCGTGTTAATGATGACGAAAATCAATTGTATAATTCTTCCATATTATTGCCTCGTGAATTAGCTCCAGTTATTGACATGAAAAAACTGCTCAAAATAATTAAAGACGATGATACAGAGCTTAACAGGTTTCATCTTGCTTGCAAAGAATGGGGATTTTTCCAG...............................................................................................TTGGTGAATCACGGAGTGAGTTCATCATTGATGGAGAAAGTGAAGTCAGAAATCACAGCATTTTTCGATCTACCAATGGAAGAGAAGACGAAATTCGAGCAAGAGGAAGGAGATATCGAAGGATACGGACAAGCATTTGTTGTATCTGAAGAACAAAAGTTAGACTGGGGTGACATGCTTTACATGATCACTCTTCCTACTCATTTGCGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E359159" ref_strand="+" ref_description="SGN-E359159 [cLHT-11-I13]">
      <seq>taaaattttatcgaccacaccacaataatctttcaatcctagataacgattttgctagaaaaaaaaaataccatgttgatgatggaagaagcgaggtcgagaaagctaggtggctctttgaaagttcctaacgttcaggagctggcaaaacaacaactagcaggtgttccatcgcgatatattcgtgttaatgatgacgaaaatcaattgtataattcttccatattattgcctcgtgaattagctccagttattgacatgaaaaaactgctcaaaataattaaagacgatgatacagagcttaacaggtttcatcttgcttgcaaagaatggggatttttccagttggtgaatcacggagtgagttcatcattgatggagaaagtgaagtcagaaatcagagcatttttcgatctaccaatggaagagaagacgaaatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="-" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="18970" stop="17838"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18670" g_stop="18328" g_length="343"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="345" r_length="345" r_score="0.950"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18327" i_stop="18233" i_length="95">
            <donor d_prob="0.992" d_score="0.94"/>
            <acceptor a_prob="0.995" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18232" g_stop="18138" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="346" r_stop="440" r_length="95" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="-" ref_id="SGN-E359159" ref_strand="+">
        <total_alignment_score>0.959</total_alignment_score>
        <cumulative_length_of_scored_exons>438</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E359159" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18670" e_stop="18328"/>
          <exon e_start="18232" e_stop="18138"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAATTTTATCGACTACAC-ACAATAATCTTTCAATCCTAGATAATGATTTTGCTAAAAAAAAAAAAATACAAGTTGATGATGGAAGAAGCGAGGTCGAGAAAGCTAGGTGGCTCTTTGAAAGTTTCTAACGTTCAGGAGCTGGCAAAACAACAACTAGCAGGTGTTCCGTCGCGATATATTCGTGTTAATGATGACGAAAATCAATTGTATAATTCGTCCATATTATTGCCTCATGAATTAGCTCCAGTTATTGACATGAAAAAACTGCTCAAAATAATTAAAGACGGTGATACAGAGCTTAACAGATTTCATCTTGCTTGCAAAGAA-GGGGATTTTTCCAGGTTACGTTTCATAGATCAAACACTCTTCATTATGCTCCATAACTACTTTTTCTCAGTTAGTTTAGCAAAAATATATGTCTAATTAAATTGCGCAGTTGGTGAATCACGGAGTGAGTTCATCATTGATGGAGAAAGTGAAATCAGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGACGAAATT</genome_strand>
        <mrna_strand>TAAAATTTTATCGACCACACCACAATAATCTTTCAATCCTAGATAACGATTTTGCTAGAAAAAAAAAATACCATGTTGATGATGGAAGAAGCGAGGTCGAGAAAGCTAGGTGGCTCTTTGAAAGTTCCTAACGTTCAGGAGCTGGCAAAACAACAACTAGCAGGTGTTCCATCGCGATATATTCGTGTTAATGATGACGAAAATCAATTGTATAATTCTTCCATATTATTGCCTCGTGAATTAGCTCCAGTTATTGACATGAAAAAACTGCTCAAAATAATTAAAGACGATGATACAGAGCTTAACAGGTTTCATCTTGCTTGCAAAGAATGGGGATTTTTCCAG...............................................................................................TTGGTGAATCACGGAGTGAGTTCATCATTGATGGAGAAAGTGAAGTCAGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGACGAAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E546564" ref_strand="+" ref_description="SGN-E546564 [TUS-69-P22]">
      <seq>gtccgatgaggctgtgtgcaggtcctaattcggattcaaggttcatgtaatagaatgtcgcaacagagagcctctcttcatttgagtttacaattgctctgtgctcaatactcctatacacaccattgctcaatatctgccaagtcaaatgtatcacatttacgcgcataatattttcagcagtagtagaacatttttacctccatcatgtctccaatattcacaatcaaagcatttgggaggggctttatgggcacccaaatatcatcttttcggacttggagaccttcagtttcgttcagctggaaaaggatggtgaggacaccaggatcagaatgagtgcttaagccaattaccctgtttggttcagggcaaggcggataataattcatcctcattgactgcataccatcactgaatagatctctcgtttcctcttcgtccatccttaaagcctttgacaattgacatacaataatcattgctaggctcttaattcctttgcagtatgcttccaagacgtccctacatttcaaaacatattaattaaaagatgaggagagcaggacatagttataaggagataggcacctgagattcgagggcaatttctgaaacaagtcaactttgcggatataaggaggaagagtcattatgccaaacatatcactccaatcaagcttctgctcctccgatacaacgaatgcattcccaaaaccttcaaagctgtcttcctgttgcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="+" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="20312" stop="21662"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20612" g_stop="21362" g_length="751"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="742" r_length="742" r_score="0.961"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="+" ref_id="SGN-E546564" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>751</cumulative_length_of_scored_exons>
        <coverage percentage="1.012" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E546564" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20612" e_stop="21362"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCCGATGAGGCTGTGTGCAGGTCCTAATTCGGATTCAAGGTTCATGTAATAGAATGTCGCAACAGAGAGCCTTTCTTCATTTGAGTTTACAATTGCTCTGTGCTCAATACTCCTATACACACCATTGCTCAATATCTGCCAAGTTAAATATATCACATTTACGCGCATAATATTTTCAGGCGGTAGTAGAACATTTTTACCTCCATCATGTCTCCAATATTCACAATCAAAGCATTTGGGAGGGGCTTTATGGGCACCCAAATATCATCTTTTCGGACTTGTAGACCTTCAGTTTCGTTCAGCTGGAAAAGGATGGTGAGGACACCAGGATCAGAATGAGTGCTTAAGCCAATTGCCCTGTTTGGTTCAGGGCAAGGCGGATAATAATTCATCCTCATTGACTGCATACCATCACTGAATAGATCTCTCATTTCCTCTTCGTCCATCCTTAAAGCCTTTGTCAATTGGCATACGATGATCCTTGCTAGGCTCTTAATTTCTTTGCAGTAAGCTTCCAAGACGTCCCTACATTTCAATACACACAAACATATTAATTAAAAGATGAGGAGAGCGGGATATAGTTATAAGGAGATAGGCACCTGAGATTCGAGGGCAATTTCTGAAACAAGTCCACTTTGCGGATACGAGGAGGAAGAGTCATTATGCCAAACATATCACTCCAATCAAGCTTCTGCTCCTCCGATACAACGAATGCATTCCCAAAACCTTCCAAGCTGTCTTCCTGTTGCC</genome_strand>
        <mrna_strand>GTCCGATGAGGCTGTGTGCAGGTCCTAATTCGGATTCAAGGTTCATGTAATAGAATGTCGCAACAGAGAGCCTCTCTTCATTTGAGTTTACAATTGCTCTGTGCTCAATACTCCTATACACACCATTGCTCAATATCTGCCAAGTCAAATGTATCACATTTACGCGCATAATATTTTCA-GCAGTAGTAGAACATTTTTACCTCCATCATGTCTCCAATATTCACAATCAAAGCATTTGGGAGGGGCTTTATGGGCACCCAAATATCATCTTTTCGGACTTGGAGACCTTCAGTTTCGTTCAGCTGGAAAAGGATGGTGAGGACACCAGGATCAGAATGAGTGCTTAAGCCAATTACCCTGTTTGGTTCAGGGCAAGGCGGATAATAATTCATCCTCATTGACTGCATACCATCACTGAATAGATCTCTCGTTTCCTCTTCGTCCATCCTTAAAGCCTTTGACAATTGACATACAATAATCATTGCTAGGCTCTTAATTCCTTTGCAGTATGCTTCCAAGACGTCCCTACA-TT---T---CA-AAACATATTAATTAAAAGATGAGGAGAGCAGGACATAGTTATAAGGAGATAGGCACCTGAGATTCGAGGGCAATTTCTGAAACAAGTCAACTTTGCGGATATAAGGAGGAAGAGTCATTATGCCAAACATATCACTCCAATCAAGCTTCTGCTCCTCCGATACAACGAATGCATTCCCAAAACCTTCAAAGCTGTCTTCCTGTTGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E359331" ref_strand="+" ref_description="SGN-E359331 [cLHT-31-J17]">
      <seq>gctgtgtgcacgtcctaattgggattcaaggttcatgtaatagaatgtcgcaacagagagcctctcttcatttgagtttacaattgctctgtgctcaatactcctatacacaccattgctcaatatctgccaagtcaaatgtatcacatttacgcgcataatattttcagcagtagtagaacatttttacctccatcatgtctccaatattcacaatcaaagcatttgggaggggctttatgggcacccaaatatcatcttttcggacttggagaccttcagtttcgttcagctggaaaaggatggtgaggacaccaggatcagaatgagtgcttaagccaattaccctgtttggttcaaggcaaggcggataataattcatcctcattgactgcataccatcactgaatagatctctcgtttcctcttcgtccatccttaaagcctttgacaattgacatacaataatcattgctaggctcttaattcctttgcagtatgcttccaagacgtccctacatttcaaaacatattaattaaaagatgaggagagcaggacatagttataaggagataagcacctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="+" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="20322" stop="21514"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20622" g_stop="21214" g_length="593"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="584" r_length="584" r_score="0.951"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="+" ref_id="SGN-E359331" ref_strand="+">
        <total_alignment_score>0.951</total_alignment_score>
        <cumulative_length_of_scored_exons>593</cumulative_length_of_scored_exons>
        <coverage percentage="1.015" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E359331" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20622" e_stop="21214"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTGTGTGCAGGTCCTAATTCGGATTCAAGGTTCATGTAATAGAATGTCGCAACAGAGAGCCTTTCTTCATTTGAGTTTACAATTGCTCTGTGCTCAATACTCCTATACACACCATTGCTCAATATCTGCCAAGTTAAATATATCACATTTACGCGCATAATATTTTCAGGCGGTAGTAGAACATTTTTACCTCCATCATGTCTCCAATATTCACAATCAAAGCATTTGGGAGGGGCTTTATGGGCACCCAAATATCATCTTTTCGGACTTGTAGACCTTCAGTTTCGTTCAGCTGGAAAAGGATGGTGAGGACACCAGGATCAGAATGAGTGCTTAAGCCAATTGCCCTGTTTGGTTCAGGGCAAGGCGGATAATAATTCATCCTCATTGACTGCATACCATCACTGAATAGATCTCTCATTTCCTCTTCGTCCATCCTTAAAGCCTTTGTCAATTGGCATACGATGATCCTTGCTAGGCTCTTAATTTCTTTGCAGTAAGCTTCCAAGACGTCCCTACATTTCAATACACACAAACATATTAATTAAAAGATGAGGAGAGCGGGATATAGTTATAAGGAGATAGGCACCTG</genome_strand>
        <mrna_strand>GCTGTGTGCACGTCCTAATTGGGATTCAAGGTTCATGTAATAGAATGTCGCAACAGAGAGCCTCTCTTCATTTGAGTTTACAATTGCTCTGTGCTCAATACTCCTATACACACCATTGCTCAATATCTGCCAAGTCAAATGTATCACATTTACGCGCATAATATTTTCA-GCAGTAGTAGAACATTTTTACCTCCATCATGTCTCCAATATTCACAATCAAAGCATTTGGGAGGGGCTTTATGGGCACCCAAATATCATCTTTTCGGACTTGGAGACCTTCAGTTTCGTTCAGCTGGAAAAGGATGGTGAGGACACCAGGATCAGAATGAGTGCTTAAGCCAATTACCCTGTTTGGTTCAAGGCAAGGCGGATAATAATTCATCCTCATTGACTGCATACCATCACTGAATAGATCTCTCGTTTCCTCTTCGTCCATCCTTAAAGCCTTTGACAATTGACATACAATAATCATTGCTAGGCTCTTAATTCCTTTGCAGTATGCTTCCAAGACGTCCCTACA-TT---T---CA-AAACATATTAATTAAAAGATGAGGAGAGCAGGACATAGTTATAAGGAGATAAGCACCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E234270" ref_strand="+" ref_description="SGN-E234270 [cLEL-8-E14](-)">
      <seq>ctagtctcctcactcctcaatgccctgcagaatttagaaggattggagtggctgattacttcaaaggatatttctctcgagagctcgttggaaaatcatatgtcgattctataagaattggaaatggaggcgatggaagcaattgataaatgtttgcattttatgcccccttggataccaacagattgtttgatttggatggacttttaactgtatcattttgtggatgtataatgtttgaataaattgtggcatttgttgtggttgcataaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="-" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="28811" stop="24403"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28511" g_stop="28239" g_length="273"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="273" r_length="273" r_score="0.985"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28238" i_stop="27522" i_length="717">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.731" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="27521" g_stop="27508" g_length="14"/>
          <reference_exon_boundary r_type="cDNA" r_start="274" r_stop="287" r_length="14" r_score="0.643"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="-" ref_id="SGN-E234270" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>287</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E234270" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28511" e_stop="28239"/>
          <exon e_start="27521" e_stop="27508"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAGTCTCCTCACTCCTCAATGCCCTGCAGAATTTAGGAGGATTGGAGTGGCTGATTACTTCAAAGGATATTTCTCTCGAGAGCTCGTTGGAAAATCATATGTCGATTCTATAAGAATTGGAAATGGAGGCGATGGAAGCAATTGATAAATGTTTGCATTTTATGCCCCCTTGGATACCAACAGATTGTTTGATTTGGATGGACTTTTTACTGTATCATTTTGTGGATGTATAATGTTTGAATAAATTGTGGCATTTGTTGTGGTTGAATAACATCATTATTGTTTGATTTTAATGTATCAAATCGTATATTAGCTACCTAAAACTGGTTGAATGGAACGACGTATCCATGTTTATACCCTGTGCTACTTGGAGAAGATGCTCAACATCTACTTCAGGGAAATGTTGTAAAAGCTTCAAGTTGCCTACAAAATCACCCCTTATTAGTTTGCTTTTAACACACATCAGCATAGCACAACAGATCCTCAATAGTATCTCCTGTAAATGAGCCATGGAGTTGGATGAAGAGCGTCTTATATATTAGATCAACCACAATATCCATCCATATAAACACACATTGATCGGATAAGTACCTGAAGGCCAAAAGGATTGCTGAGAAGCGTATCCCAGATCCGTAAGATGTGATGCAAACTAAACTCCTGAGTAAGGAGCAGAGTGATCCACCTAAATGCATAGAATTGCGGGTTAACCTGAAATCAAAACATTAGCTAGGACGACTGATATATATGTGAGCAATAACTTAGGTATTTATAGCTGTGCCTAAGAAATAGGTTCACATTCACCTTTGTTTTTAATTCAAGATGGTGCCACAATTCTTCATCATTAGTTTTCAATAACTCTGACAATTTGGAAAGAGTTGAGTGGATACCAAACGAACTGCAATCAAATTGTTGACAGAAGTGATCCACACAGCTACTCATTAGTATAACAAAACAGGAAAAAGTATCTGCTTCTATATTTGCCTGCACAGTGGAGAAAAACAAA</genome_strand>
        <mrna_strand>CTAGTCTCCTCACTCCTCAATGCCCTGCAGAATTTAGAAGGATTGGAGTGGCTGATTACTTCAAAGGATATTTCTCTCGAGAGCTCGTTGGAAAATCATATGTCGATTCTATAAGAATTGGAAATGGAGGCGATGGAAGCAATTGATAAATGTTTGCATTTTATGCCCCCTTGGATACCAACAGATTGTTTGATTTGGATGGACTTTTAACTGTATCATTTTGTGGATGTATAATGTTTGAATAAATTGTGGCATTTGTTGTGGTTGCATAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E234020" ref_strand="+" ref_description="SGN-E234020 [cLEL-8-E14](-)">
      <seq>gattgtgacaaatggaatctacaaaagcactgaacatcgagcaattgtgaacgaagataaagagaggatttccattgctacatttttgagccccaatctggatggagatttaggtccagctcctagtctcctcactcctcaatgccctgcagaatttaggaggattggagtggctgattacttcaaaggatatttctctcgagagctcgatgaaaaatcatatgtcgattctataagaattggaaatcgcgccaatgttagctaatgatacacgagtgcattttatgcccccgtggataccaacagattgtttgatttggatggactttttactgtatcattttgtggatgtataatgtttgaataaactgtggcatttgttgtggttgaataaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="-" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="28933" stop="27938"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28633" g_stop="28239" g_length="395"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="395" r_length="395" r_score="0.954"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="396" polyA_stop="409"/>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="-" ref_id="SGN-E234020" ref_strand="+">
        <total_alignment_score>0.954</total_alignment_score>
        <cumulative_length_of_scored_exons>395</cumulative_length_of_scored_exons>
        <coverage percentage="0.966" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E234020" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28633" e_stop="28239"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATTCTGACAAATGGAATCTACAAAAGCACTGAACATCGAGCAATTGTGAACGAAGATAAAGAGAGGATTTCCATTGCTACATTTTTGAGCCCCAATCTGGATGGAGATTTAGGTCCAGCTCCTAGTCTCCTCACTCCTCAATGCCCTGCAGAATTTAGGAGGATTGGAGTGGCTGATTACTTCAAAGGATATTTCTCTCGAGAGCTCGTTGGAAAATCATATGTCGATTCTATAAGAATTGGAAATGGAGGCGATGGAAGCAATTGATAAATGTTTGCATTTTATGCCCCCTTGGATACCAACAGATTGTTTGATTTGGATGGACTTTTTACTGTATCATTTTGTGGATGTATAATGTTTGAATAAATTGTGGCATTTGTTGTGGTTGAATAAC</genome_strand>
        <mrna_strand>GATTGTGACAAATGGAATCTACAAAAGCACTGAACATCGAGCAATTGTGAACGAAGATAAAGAGAGGATTTCCATTGCTACATTTTTGAGCCCCAATCTGGATGGAGATTTAGGTCCAGCTCCTAGTCTCCTCACTCCTCAATGCCCTGCAGAATTTAGGAGGATTGGAGTGGCTGATTACTTCAAAGGATATTTCTCTCGAGAGCTCGATGAAAAATCATATGTCGATTCTATAAGAATTGGAAATCGCGCCAATGTTAGCTAATGATACACGAGTGCATTTTATGCCCCCGTGGATACCAACAGATTGTTTGATTTGGATGGACTTTTTACTGTATCATTTTGTGGATGTATAATGTTTGAATAAACTGTGGCATTTGTTGTGGTTGAATAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E220248" ref_strand="+" ref_description="SGN-E220248 [cLEL-12-C4](-)">
      <seq>aaaggatatttctctcgagagctcgttggaaaatcatatgtcgattctataagaattggaaatggaggcgatggaagcaattgataaatgtttgcattttatgcccccttggataccaacagattgtttgatttggatgaactttttactgtatcattttgtgaatgtataatgtttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="-" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="28749" stop="27972"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28449" g_stop="28272" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="178" r_length="178" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="-" ref_id="SGN-E220248" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>178</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E220248" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28449" e_stop="28272"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGGATATTTCTCTCGAGAGCTCGTTGGAAAATCATATGTCGATTCTATAAGAATTGGAAATGGAGGCGATGGAAGCAATTGATAAATGTTTGCATTTTATGCCCCCTTGGATACCAACAGATTGTTTGATTTGGATGGACTTTTTACTGTATCATTTTGTGGATGTATAATGTTTG</genome_strand>
        <mrna_strand>AAAGGATATTTCTCTCGAGAGCTCGTTGGAAAATCATATGTCGATTCTATAAGAATTGGAAATGGAGGCGATGGAAGCAATTGATAAATGTTTGCATTTTATGCCCCCTTGGATACCAACAGATTGTTTGATTTGGATGAACTTTTTACTGTATCATTTTGTGAATGTATAATGTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E333231" ref_strand="+" ref_description="SGN-E333231 [cTOD-20-F5]">
      <seq>tgaaatcggaaatcagagcatttttcgatctaccaatggaagagaagacgaaattcgagcaagaagaaggagatctcgaaggatacgggcaagcatttgttgtatctgaagagcaaaagttagattgggctgatatactttacatgatcactctccctactcatttgcgaaaacctcacttgtttccaaagcttcctgcctcgttcagggatgcattggaacaatactcaagagcactgaaggaacttgctatgaaaattctgtacgtaatggcaagagctttagggatgaaaacagaggatatgaatgtactatttgaacaagacgggacacaaatgatgagaataaattattatcctccttgtcctcaaccagagcgcgtaatggggttatgccctcatactgatgctattggtctagctatattacttcaggttaatgaaacggaaggtcttncaattaagaaagatggagcttggattccggttccatatcttcctgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="-" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="29655" stop="17332"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29355" g_stop="29148" g_length="208"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="208" r_length="208" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29147" i_stop="29077" i_length="71">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.784" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29076" g_stop="28781" g_length="296"/>
          <reference_exon_boundary r_type="cDNA" r_start="209" r_stop="504" r_length="296" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="-" ref_id="SGN-E333231" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>504</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E333231" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29355" e_stop="29148"/>
          <exon e_start="29076" e_stop="28781"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAATCGGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGACGAAATTCGAGCAAGAAGAAGGAGATCTCGAAGGATACGGGCAAGCATTTGTTGTATCTGAAGAACAAAAGTTAGATTGGGCTGATATACTTTACATGATCACTCTCCCTACTCATTTGCGAAAACCTCACTTGTTTCCAAAGCTTCCTGCCTCGTTCAGGTACGATAATATATAACTGAGTTTACGATTAAATATTTAGTTCACAATATTTAAATTCTTGGACCGATAAGGGATGCATTGGAACAATACTCAAGAACACTGAAGGAACTTGCTATGAAAATTCTGTACGTAATGGCCAGAGCTTTAGGGATGAAAACAGAGGATATGAATGTACTATTTGAACAAGACGGGACACAAATGATGAGAATAAATTATTATCCTCCTTGTCCTCAACCAGAGCGCGTAATGGGGTTATGCCCCCATACTGATGCTATTGGTCTAGCTATATTACTTCAGGTTAATGAAACGGAAGGTCTTCAAATTAAGAAAGATGGAGCTTGGACTCCGGTTCCATATCTTCCTGATG</genome_strand>
        <mrna_strand>TGAAATCGGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGACGAAATTCGAGCAAGAAGAAGGAGATCTCGAAGGATACGGGCAAGCATTTGTTGTATCTGAAGAGCAAAAGTTAGATTGGGCTGATATACTTTACATGATCACTCTCCCTACTCATTTGCGAAAACCTCACTTGTTTCCAAAGCTTCCTGCCTCGTTCAG.......................................................................GGATGCATTGGAACAATACTCAAGAGCACTGAAGGAACTTGCTATGAAAATTCTGTACGTAATGGCAAGAGCTTTAGGGATGAAAACAGAGGATATGAATGTACTATTTGAACAAGACGGGACACAAATGATGAGAATAAATTATTATCCTCCTTGTCCTCAACCAGAGCGCGTAATGGGGTTATGCCCTCATACTGATGCTATTGGTCTAGCTATATTACTTCAGGTTAATGAAACGGAAGGTCTTNCAATTAAGAAAGATGGAGCTTGGATTCCGGTTCCATATCTTCCTGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E331048" ref_strand="+" ref_description="SGN-E331048 [cTOD-6-O7]">
      <seq>agatattgatgatgattcggaactcgtgaggcttcatctcgcttgcaaagaatggggattttttcagctggtgaatcatggagtgaattcctcattgatgaagaaagtgaaatcggaaatcagagcatttttcgatctaccaatggaagagaagacgaaattcgagcaagaagaaggagatctcgaaggatacgggcaagcatttgttgtatctgaagagcaaaagttagattgggctgatatactttacatgatcactctccctactcatttgcgaaaacctcacttgtttccaaagcttcctgcctcgttcagggatgcattggaacaatactcaagagcactgaaggaacttgctatgaaaattctgtacgtaatggcaagagctttagggatgaaaacagaggatatgaatgtactatttgaacaagacgggacacaaatgatgagaataaattattatcctccttgtcctcaaccagagcgcgtaatggggttatgccctcatactgatgctattggtctagctatattac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="-" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="30055" stop="17407"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29755" g_stop="29689" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="67" r_length="67" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29688" i_stop="29396" i_length="293">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29395" g_stop="29148" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="68" r_stop="315" r_length="248" r_score="0.996"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29147" i_stop="29077" i_length="71">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.784" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29076" g_stop="28856" g_length="221"/>
          <reference_exon_boundary r_type="cDNA" r_start="316" r_stop="536" r_length="221" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="-" ref_id="SGN-E331048" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>536</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E331048" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29755" e_stop="29689"/>
          <exon e_start="29395" e_stop="29148"/>
          <exon e_start="29076" e_stop="28856"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGATATTGATGATGATTCGGAACTCGTGAGGCTTCATCTCGCTTGCAAAGAATGGGGATTTTTTCAGGTTTATATATCAAAAAAACACTTTTTTTAAAAAAATTATTGTTTTATGTTACAGAAATGTTGGAGTTGACTTATTTAACCATCAATAATACAACTGCACTCCAAAACATACAATAATCTTATTAAATATAACAAGTGATATTCTTTTTTTTGACGTATTGAAACTAACCTAGGAAGAAACAAAATTTAACAATCTTTTTGATTACCGATCATATCTTTTAATTTAAAAATAAACTGATGTATCTTCGTGTCGCATGATGATATCGATTTTTTTAAAAAAAAATACATGTGCAGCTGGTGAATCATGGAGTGAATTCCTCATTGATGAAGAAAGTGAAATCGGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGACGAAATTCGAGCAAGAAGAAGGAGATCTCGAAGGATACGGGCAAGCATTTGTTGTATCTGAAGAACAAAAGTTAGATTGGGCTGATATACTTTACATGATCACTCTCCCTACTCATTTGCGAAAACCTCACTTGTTTCCAAAGCTTCCTGCCTCGTTCAGGTACGATAATATATAACTGAGTTTACGATTAAATATTTAGTTCACAATATTTAAATTCTTGGACCGATAAGGGATGCATTGGAACAATACTCAAGAACACTGAAGGAACTTGCTATGAAAATTCTGTACGTAATGGCCAGAGCTTTAGGGATGAAAACAGAGGATATGAATGTACTATTTGAACAAGACGGGACACAAATGATGAGAATAAATTATTATCCTCCTTGTCCTCAACCAGAGCGCGTAATGGGGTTATGCCCCCATACTGATGCTATTGGTCTAGCTATATTAC</genome_strand>
        <mrna_strand>AGATATTGATGATGATTCGGAACTCGTGAGGCTTCATCTCGCTTGCAAAGAATGGGGATTTTTTCAG.....................................................................................................................................................................................................................................................................................................CTGGTGAATCATGGAGTGAATTCCTCATTGATGAAGAAAGTGAAATCGGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGACGAAATTCGAGCAAGAAGAAGGAGATCTCGAAGGATACGGGCAAGCATTTGTTGTATCTGAAGAGCAAAAGTTAGATTGGGCTGATATACTTTACATGATCACTCTCCCTACTCATTTGCGAAAACCTCACTTGTTTCCAAAGCTTCCTGCCTCGTTCAG.......................................................................GGATGCATTGGAACAATACTCAAGAGCACTGAAGGAACTTGCTATGAAAATTCTGTACGTAATGGCAAGAGCTTTAGGGATGAAAACAGAGGATATGAATGTACTATTTGAACAAGACGGGACACAAATGATGAGAATAAATTATTATCCTCCTTGTCCTCAACCAGAGCGCGTAATGGGGTTATGCCCTCATACTGATGCTATTGGTCTAGCTATATTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E355747" ref_strand="+" ref_description="SGN-E355747 [cLHT-18-N3]">
      <seq>ttaaattgcgcagttggtgaatcacggagtgagttcatcattgatggagaaagtgaagtcagaaatcacagcatttttcgatctaccaatggaagagaagacgaaattcgagcaagaggaaggagatatcgaaggatacggacaagcatttgttgtatctgaagaacaaaagttagactggggtgacatgctttacatgatcactcttcctactcatttgcgaaaacctcacttgtttccgaagcttgctgcctcactcaggtacgataatatataactgagtttacgattaaatatttagtgtacaatattaaaattcttggtccgtcaagggatgcattggaacaatactcaacagcactgaaggaacttgctatgaaaattctgtacgtaatggcaagagctttacggatgagaacagaggatatgaatgtattatttgaacaagacgggacacaaatgatgagaataaattattat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="-" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="29706" stop="28629"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29395" g_stop="28929" g_length="467"/>
          <reference_exon_boundary r_type="cDNA" r_start="14" r_stop="480" r_length="467" r_score="0.931"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="-" ref_id="SGN-E355747" ref_strand="+">
        <total_alignment_score>0.931</total_alignment_score>
        <cumulative_length_of_scored_exons>467</cumulative_length_of_scored_exons>
        <coverage percentage="0.973" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E355747" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29395" e_stop="28929"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGGTGAATCATGGAGTGAATTCCTCATTGATGAAGAAAGTGAAATCGGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGACGAAATTCGAGCAAGAAGAAGGAGATCTCGAAGGATACGGGCAAGCATTTGTTGTATCTGAAGAACAAAAGTTAGATTGGGCTGATATACTTTACATGATCACTCTCCCTACTCATTTGCGAAAACCTCACTTGTTTCCAAAGCTTCCTGCCTCGTTCAGGTACGATAATATATAACTGAGTTTACGATTAAATATTTAGTTCACAATATTTAAATTCTTGGACCGATAAGGGATGCATTGGAACAATACTCAAGAACACTGAAGGAACTTGCTATGAAAATTCTGTACGTAATGGCCAGAGCTTTAGGGATGAAAACAGAGGATATGAATGTACTATTTGAACAAGACGGGACACAAATGATGAGAATAAATTATTAT</genome_strand>
        <mrna_strand>TTGGTGAATCACGGAGTGAGTTCATCATTGATGGAGAAAGTGAAGTCAGAAATCACAGCATTTTTCGATCTACCAATGGAAGAGAAGACGAAATTCGAGCAAGAGGAAGGAGATATCGAAGGATACGGACAAGCATTTGTTGTATCTGAAGAACAAAAGTTAGACTGGGGTGACATGCTTTACATGATCACTCTTCCTACTCATTTGCGAAAACCTCACTTGTTTCCGAAGCTTGCTGCCTCACTCAGGTACGATAATATATAACTGAGTTTACGATTAAATATTTAGTGTACAATATTAAAATTCTTGGTCCGTCAAGGGATGCATTGGAACAATACTCAACAGCACTGAAGGAACTTGCTATGAAAATTCTGTACGTAATGGCAAGAGCTTTACGGATGAGAACAGAGGATATGAATGTATTATTTGAACAAGACGGGACACAAATGATGAGAATAAATTATTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E355750" ref_strand="+" ref_description="SGN-E355750 [cLHT-18-P5]">
      <seq>ttaaattgcgcagttggtgaatcacggagtgagttcatcattgatggagaaagtgaagtcagaaatcagagcatttttcgatctaccaatggaagagaagacgaaattcgagcaagaggaaggagatatcgaaggatacggacaagcatttgttgtatctgaagaacaaaagttagactggggtgacatgctttacatgatcactcttcctactcatttgcgaaaacctcacttgtttccgaagcttgctgcctcactcaggtacgataatatataactgagtttacgattaaatatttagtgtacaatattaaaattcttggtccgtcaagggatgcattggaacaatactcaacagcactgaaggaacttgctatgaaaattctgtacgtaatggcaagagctttacggatgagaacagaggatatgaatgtattatttgaacaagacgggacacaaatgatgagaataaattatta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="-" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="29706" stop="28630"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29395" g_stop="28930" g_length="466"/>
          <reference_exon_boundary r_type="cDNA" r_start="14" r_stop="479" r_length="466" r_score="0.933"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="-" ref_id="SGN-E355750" ref_strand="+">
        <total_alignment_score>0.933</total_alignment_score>
        <cumulative_length_of_scored_exons>466</cumulative_length_of_scored_exons>
        <coverage percentage="0.973" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E355750" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29395" e_stop="28930"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGGTGAATCATGGAGTGAATTCCTCATTGATGAAGAAAGTGAAATCGGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGACGAAATTCGAGCAAGAAGAAGGAGATCTCGAAGGATACGGGCAAGCATTTGTTGTATCTGAAGAACAAAAGTTAGATTGGGCTGATATACTTTACATGATCACTCTCCCTACTCATTTGCGAAAACCTCACTTGTTTCCAAAGCTTCCTGCCTCGTTCAGGTACGATAATATATAACTGAGTTTACGATTAAATATTTAGTTCACAATATTTAAATTCTTGGACCGATAAGGGATGCATTGGAACAATACTCAAGAACACTGAAGGAACTTGCTATGAAAATTCTGTACGTAATGGCCAGAGCTTTAGGGATGAAAACAGAGGATATGAATGTACTATTTGAACAAGACGGGACACAAATGATGAGAATAAATTATTA</genome_strand>
        <mrna_strand>TTGGTGAATCACGGAGTGAGTTCATCATTGATGGAGAAAGTGAAGTCAGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGACGAAATTCGAGCAAGAGGAAGGAGATATCGAAGGATACGGACAAGCATTTGTTGTATCTGAAGAACAAAAGTTAGACTGGGGTGACATGCTTTACATGATCACTCTTCCTACTCATTTGCGAAAACCTCACTTGTTTCCGAAGCTTGCTGCCTCACTCAGGTACGATAATATATAACTGAGTTTACGATTAAATATTTAGTGTACAATATTAAAATTCTTGGTCCGTCAAGGGATGCATTGGAACAATACTCAACAGCACTGAAGGAACTTGCTATGAAAATTCTGTACGTAATGGCAAGAGCTTTACGGATGAGAACAGAGGATATGAATGTATTATTTGAACAAGACGGGACACAAATGATGAGAATAAATTATTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E334512" ref_strand="+" ref_description="SGN-E334512 [cTOD-23-L15]">
      <seq>gttattatttcatatctcaataagtttactttgtaaaacaagtttgaggaaaaaaaaaataatacaaacttcatcaatggaagaagcaaagttgagaaagctaggtggttctctgaaagtccctaacgttcaagaacttgcaaagcaacaactagcagccgttccatcgcgatatatgcgcgataatattgaaaatcaatcatattcttccatattacctcaagttccagttattgatatgaaaaaattgctggaaattggagatattgatgatgattcggaactcgtgaggcttcatctcgcttgcaaagaatggggattttttcagctggtgaatcatggagtgaattcctcattgatgaagaaagtgaaatcggaaatcagagcatttttcgatctaccaatggaagagaagacgaaattcgagcaagaagaaggagatctcgaaggatacgggcaagcatttgttgtatctgaagagcaaaagttagattgggctgatatactttacatgatcactctccctactcatttgcgaaaacctcacttgtttccaaagcttcctgcctcgttcagggatgcattggaacaatactcaagagcactgaaggaacttgctatngaaattctgtacgtaatggcaagagctttagggatgaaacagangatatgaatgtactatttgaaacagacgggacacaaatgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="-" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="30314" stop="17495"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30014" g_stop="29689" g_length="326"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="328" r_length="328" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29688" i_stop="29396" i_length="293">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29395" g_stop="29148" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="329" r_stop="576" r_length="248" r_score="0.996"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29147" i_stop="29077" i_length="71">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.784" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29076" g_stop="28944" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="577" r_stop="708" r_length="132" r_score="0.940"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="-" ref_id="SGN-E334512" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>707</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E334512" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30014" e_stop="29689"/>
          <exon e_start="29395" e_stop="29148"/>
          <exon e_start="29076" e_stop="28944"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTATTATTTCATATCTCAATAAGTTTACTTTGTAAAACAAGTTTGAGG-GAGAAAAAA-AATACAAACTTCATCAATGGAAGAAGCAAAGTTGAGAAAGCTAGGTGGTTCTCTGAAAGTCCCTAACGTTCAAGAACTTGCAAAGCAACAACTAGCAGCCGTTCCATCGCGATATATGCGCGATGATATTGAAAATCAATCATATTCTTCCATATTACCTCAAGTTCCAGTTATTGATATGAAAAAATTGCTGGAAATTGGAGATATTGATGATGATTCGGAACTCGTGAGGCTTCATCTCGCTTGCAAAGAATGGGGATTTTTTCAGGTTTATATATCAAAAAAACACTTTTTTTAAAAAAATTATTGTTTTATGTTACAGAAATGTTGGAGTTGACTTATTTAACCATCAATAATACAACTGCACTCCAAAACATACAATAATCTTATTAAATATAACAAGTGATATTCTTTTTTTTGACGTATTGAAACTAACCTAGGAAGAAACAAAATTTAACAATCTTTTTGATTACCGATCATATCTTTTAATTTAAAAATAAACTGATGTATCTTCGTGTCGCATGATGATATCGATTTTTTTAAAAAAAAATACATGTGCAGCTGGTGAATCATGGAGTGAATTCCTCATTGATGAAGAAAGTGAAATCGGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGACGAAATTCGAGCAAGAAGAAGGAGATCTCGAAGGATACGGGCAAGCATTTGTTGTATCTGAAGAACAAAAGTTAGATTGGGCTGATATACTTTACATGATCACTCTCCCTACTCATTTGCGAAAACCTCACTTGTTTCCAAAGCTTCCTGCCTCGTTCAGGTACGATAATATATAACTGAGTTTACGATTAAATATTTAGTTCACAATATTTAAATTCTTGGACCGATAAGGGATGCATTGGAACAATACTCAAGAACACTGAAGGAACTTGCTATGAAAATTCTGTACGTAATGGCCAGAGCTTTAGGGATGAAAACAGAGGATATGAATGTACTATTTGAACAAGACGGGACACAAATGATG</genome_strand>
        <mrna_strand>GTTATTATTTCATATCTCAATAAGTTTACTTTGTAAAACAAGTTTGAGGAAAAAAAAAATAATACAAACTTCATCAATGGAAGAAGCAAAGTTGAGAAAGCTAGGTGGTTCTCTGAAAGTCCCTAACGTTCAAGAACTTGCAAAGCAACAACTAGCAGCCGTTCCATCGCGATATATGCGCGATAATATTGAAAATCAATCATATTCTTCCATATTACCTCAAGTTCCAGTTATTGATATGAAAAAATTGCTGGAAATTGGAGATATTGATGATGATTCGGAACTCGTGAGGCTTCATCTCGCTTGCAAAGAATGGGGATTTTTTCAG.....................................................................................................................................................................................................................................................................................................CTGGTGAATCATGGAGTGAATTCCTCATTGATGAAGAAAGTGAAATCGGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGACGAAATTCGAGCAAGAAGAAGGAGATCTCGAAGGATACGGGCAAGCATTTGTTGTATCTGAAGAGCAAAAGTTAGATTGGGCTGATATACTTTACATGATCACTCTCCCTACTCATTTGCGAAAACCTCACTTGTTTCCAAAGCTTCCTGCCTCGTTCAG.......................................................................GGATGCATTGGAACAATACTCAAGAGCACTGAAGGAACTTGCTATNGAAATTCTGTACGTAATGGCAAGAGCTTTAGGGATG-AAACAGANGATATGAATGTACTATTTGAAACAGACGGGACACAAATGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E329296" ref_strand="+" ref_description="SGN-E329296 [cTOD-2-C2]">
      <seq>caaagttgagaaagctaggtggttctctgaaagtcccggacgttcaagaacttgcaaagcaacaactagcagccgttccatcgcgatatatgcgcgataatattgaaaatcaatcatattcttccatattacctcaagttccagttattgatatgaaaaaattgctggaaattggagatattgatgatgattcggaactcgtgaggcttcatctcgcttgcaaagaatggggattttttcagctggtgaatcatggagtgaattcctcattgatgaagaaagtgaaatcggaaatcagagcatttttcgatctaccaatggaagagaagacgaaattcgagcaagaagaaggagatctcgaaggatacgggcaagcatttgttgtatctgaagagcaaaagttagattgggctgatatactttacatgatcactctccctactcatttgcgaaaacctcacttgtttccaaagcttcctgcctcgttcaaggatgcattggaacaatactcaagagcactgaaggaacttgctatgaaaattctgtacgtaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="-" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="30230" stop="17564"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29930" g_stop="29689" g_length="242"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="242" r_length="242" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29688" i_stop="29396" i_length="293">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29395" g_stop="29148" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="243" r_stop="490" r_length="248" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29147" i_stop="29077" i_length="71">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.784" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29076" g_stop="29013" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="491" r_stop="554" r_length="64" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="-" ref_id="SGN-E329296" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>554</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E329296" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29930" e_stop="29689"/>
          <exon e_start="29395" e_stop="29148"/>
          <exon e_start="29076" e_stop="29013"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAGTTGAGAAAGCTAGGTGGTTCTCTGAAAGTCCCTAACGTTCAAGAACTTGCAAAGCAACAACTAGCAGCCGTTCCATCGCGATATATGCGCGATGATATTGAAAATCAATCATATTCTTCCATATTACCTCAAGTTCCAGTTATTGATATGAAAAAATTGCTGGAAATTGGAGATATTGATGATGATTCGGAACTCGTGAGGCTTCATCTCGCTTGCAAAGAATGGGGATTTTTTCAGGTTTATATATCAAAAAAACACTTTTTTTAAAAAAATTATTGTTTTATGTTACAGAAATGTTGGAGTTGACTTATTTAACCATCAATAATACAACTGCACTCCAAAACATACAATAATCTTATTAAATATAACAAGTGATATTCTTTTTTTTGACGTATTGAAACTAACCTAGGAAGAAACAAAATTTAACAATCTTTTTGATTACCGATCATATCTTTTAATTTAAAAATAAACTGATGTATCTTCGTGTCGCATGATGATATCGATTTTTTTAAAAAAAAATACATGTGCAGCTGGTGAATCATGGAGTGAATTCCTCATTGATGAAGAAAGTGAAATCGGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGACGAAATTCGAGCAAGAAGAAGGAGATCTCGAAGGATACGGGCAAGCATTTGTTGTATCTGAAGAACAAAAGTTAGATTGGGCTGATATACTTTACATGATCACTCTCCCTACTCATTTGCGAAAACCTCACTTGTTTCCAAAGCTTCCTGCCTCGTTCAGGTACGATAATATATAACTGAGTTTACGATTAAATATTTAGTTCACAATATTTAAATTCTTGGACCGATAAGGGATGCATTGGAACAATACTCAAGAACACTGAAGGAACTTGCTATGAAAATTCTGTACGTAATG</genome_strand>
        <mrna_strand>CAAAGTTGAGAAAGCTAGGTGGTTCTCTGAAAGTCCCGGACGTTCAAGAACTTGCAAAGCAACAACTAGCAGCCGTTCCATCGCGATATATGCGCGATAATATTGAAAATCAATCATATTCTTCCATATTACCTCAAGTTCCAGTTATTGATATGAAAAAATTGCTGGAAATTGGAGATATTGATGATGATTCGGAACTCGTGAGGCTTCATCTCGCTTGCAAAGAATGGGGATTTTTTCAG.....................................................................................................................................................................................................................................................................................................CTGGTGAATCATGGAGTGAATTCCTCATTGATGAAGAAAGTGAAATCGGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGACGAAATTCGAGCAAGAAGAAGGAGATCTCGAAGGATACGGGCAAGCATTTGTTGTATCTGAAGAGCAAAAGTTAGATTGGGCTGATATACTTTACATGATCACTCTCCCTACTCATTTGCGAAAACCTCACTTGTTTCCAAAGCTTCCTGCCTCGTTCAA.......................................................................GGATGCATTGGAACAATACTCAAGAGCACTGAAGGAACTTGCTATGAAAATTCTGTACGTAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E329895" ref_strand="+" ref_description="SGN-E329895 [cTOD-5-A21]">
      <seq>atacacgttattatttcatatctcaataagtttactttgtaaaacaagtttgaggaaaaaaaaaataatacaaacttcatcaatggaagaagcaaagttgagaaagctaggtggttctctgaaagtccctaacgttcaagaacttgcaaagcaacaactagcagccgttccatcgcgatatatgcgcgataatattgaaaatcaatcatattcttccatattacctcaagttccagttattgatatgaaaaaattgctggaaattggagatattgatgatgattcggaactcgtgaggcttcatctcgcttgcaaagaatggggattttttcagctggtgaatcatggagtgaattcctcattgatgaagaaagtgaaatcggaaatcagagcatttttcgatctaccaatggaagagaagacgaaattcgagcaagaagaaggagatctcgaaggatacgggcaagcatttgttgtatctgaagagcaaaagttagattgggctgatatactttacatgatcactctccctactcatttgcgaaaacctcacttgtttccaaagcttcctgcctcgttcaaggatgcattggaacaatactcaagagcactgaaggaacttgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="-" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="30320" stop="17586"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30020" g_stop="29689" g_length="332"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="334" r_length="334" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29688" i_stop="29396" i_length="293">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29395" g_stop="29148" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="335" r_stop="582" r_length="248" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29147" i_stop="29077" i_length="71">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.784" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29076" g_stop="29035" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="583" r_stop="624" r_length="42" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="-" ref_id="SGN-E329895" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>622</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E329895" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30020" e_stop="29689"/>
          <exon e_start="29395" e_stop="29148"/>
          <exon e_start="29076" e_stop="29035"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATACACGTTATTATTTCATATCTCAATAAGTTTACTTTGTAAAACAAGTTTGAGG-GAGAAAAAA-AATACAAACTTCATCAATGGAAGAAGCAAAGTTGAGAAAGCTAGGTGGTTCTCTGAAAGTCCCTAACGTTCAAGAACTTGCAAAGCAACAACTAGCAGCCGTTCCATCGCGATATATGCGCGATGATATTGAAAATCAATCATATTCTTCCATATTACCTCAAGTTCCAGTTATTGATATGAAAAAATTGCTGGAAATTGGAGATATTGATGATGATTCGGAACTCGTGAGGCTTCATCTCGCTTGCAAAGAATGGGGATTTTTTCAGGTTTATATATCAAAAAAACACTTTTTTTAAAAAAATTATTGTTTTATGTTACAGAAATGTTGGAGTTGACTTATTTAACCATCAATAATACAACTGCACTCCAAAACATACAATAATCTTATTAAATATAACAAGTGATATTCTTTTTTTTGACGTATTGAAACTAACCTAGGAAGAAACAAAATTTAACAATCTTTTTGATTACCGATCATATCTTTTAATTTAAAAATAAACTGATGTATCTTCGTGTCGCATGATGATATCGATTTTTTTAAAAAAAAATACATGTGCAGCTGGTGAATCATGGAGTGAATTCCTCATTGATGAAGAAAGTGAAATCGGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGACGAAATTCGAGCAAGAAGAAGGAGATCTCGAAGGATACGGGCAAGCATTTGTTGTATCTGAAGAACAAAAGTTAGATTGGGCTGATATACTTTACATGATCACTCTCCCTACTCATTTGCGAAAACCTCACTTGTTTCCAAAGCTTCCTGCCTCGTTCAGGTACGATAATATATAACTGAGTTTACGATTAAATATTTAGTTCACAATATTTAAATTCTTGGACCGATAAGGGATGCATTGGAACAATACTCAAGAACACTGAAGGAACTTGC</genome_strand>
        <mrna_strand>ATACACGTTATTATTTCATATCTCAATAAGTTTACTTTGTAAAACAAGTTTGAGGAAAAAAAAAATAATACAAACTTCATCAATGGAAGAAGCAAAGTTGAGAAAGCTAGGTGGTTCTCTGAAAGTCCCTAACGTTCAAGAACTTGCAAAGCAACAACTAGCAGCCGTTCCATCGCGATATATGCGCGATAATATTGAAAATCAATCATATTCTTCCATATTACCTCAAGTTCCAGTTATTGATATGAAAAAATTGCTGGAAATTGGAGATATTGATGATGATTCGGAACTCGTGAGGCTTCATCTCGCTTGCAAAGAATGGGGATTTTTTCAG.....................................................................................................................................................................................................................................................................................................CTGGTGAATCATGGAGTGAATTCCTCATTGATGAAGAAAGTGAAATCGGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGACGAAATTCGAGCAAGAAGAAGGAGATCTCGAAGGATACGGGCAAGCATTTGTTGTATCTGAAGAGCAAAAGTTAGATTGGGCTGATATACTTTACATGATCACTCTCCCTACTCATTTGCGAAAACCTCACTTGTTTCCAAAGCTTCCTGCCTCGTTCAA.......................................................................GGATGCATTGGAACAATACTCAAGAGCACTGAAGGAACTTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E330283" ref_strand="+" ref_description="SGN-E330283 [cTOD-4-H9]">
      <seq>attatttcatatctcaataagtttactttgtaaaacaagtttgaggaaaaaaaaaataatacaaacttcatcaatggaagaagcaaagttgagaaagctaggtggttctctgaaagtccctaacgttcaagaacttgcaaagcaacaactagcagccgttccatcgcgatatatgcgcgataatattgaaaatcaatcatattcttccatattacctcaagttccagttattgatatgaaaaaattgctggaaattggagatattgatgatgattcggaactcgtgaggcttcatctcgcttgcaaagaatggggattttttcagctggtgaatcatggagtgaattcctcattgatgaagaaagtgaaatcggaaatcagagcatttttcgatctaccaatggaagagaagacgaaattcgagcaagaagaaggagatctcgaaggatacgggcaagcatttgttgtatctgaagagcaaaagttagattgggctgatatactttacatgatcactctccctactcatttgcgaaaacctcacttgtttccaaagcttcctgcctcgttcagggatgcattggaacaatactc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="-" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="30311" stop="17607"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30011" g_stop="29689" g_length="323"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="325" r_length="325" r_score="0.978"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29688" i_stop="29396" i_length="293">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29395" g_stop="29148" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="326" r_stop="573" r_length="248" r_score="0.996"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29147" i_stop="29077" i_length="71">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.784" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29076" g_stop="29056" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="574" r_stop="594" r_length="21" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="-" ref_id="SGN-E330283" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>592</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E330283" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30011" e_stop="29689"/>
          <exon e_start="29395" e_stop="29148"/>
          <exon e_start="29076" e_stop="29056"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTATTTCATATCTCAATAAGTTTACTTTGTAAAACAAGTTTGAGG-GAGAAAAAA-AATACAAACTTCATCAATGGAAGAAGCAAAGTTGAGAAAGCTAGGTGGTTCTCTGAAAGTCCCTAACGTTCAAGAACTTGCAAAGCAACAACTAGCAGCCGTTCCATCGCGATATATGCGCGATGATATTGAAAATCAATCATATTCTTCCATATTACCTCAAGTTCCAGTTATTGATATGAAAAAATTGCTGGAAATTGGAGATATTGATGATGATTCGGAACTCGTGAGGCTTCATCTCGCTTGCAAAGAATGGGGATTTTTTCAGGTTTATATATCAAAAAAACACTTTTTTTAAAAAAATTATTGTTTTATGTTACAGAAATGTTGGAGTTGACTTATTTAACCATCAATAATACAACTGCACTCCAAAACATACAATAATCTTATTAAATATAACAAGTGATATTCTTTTTTTTGACGTATTGAAACTAACCTAGGAAGAAACAAAATTTAACAATCTTTTTGATTACCGATCATATCTTTTAATTTAAAAATAAACTGATGTATCTTCGTGTCGCATGATGATATCGATTTTTTTAAAAAAAAATACATGTGCAGCTGGTGAATCATGGAGTGAATTCCTCATTGATGAAGAAAGTGAAATCGGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGACGAAATTCGAGCAAGAAGAAGGAGATCTCGAAGGATACGGGCAAGCATTTGTTGTATCTGAAGAACAAAAGTTAGATTGGGCTGATATACTTTACATGATCACTCTCCCTACTCATTTGCGAAAACCTCACTTGTTTCCAAAGCTTCCTGCCTCGTTCAGGTACGATAATATATAACTGAGTTTACGATTAAATATTTAGTTCACAATATTTAAATTCTTGGACCGATAAGGGATGCATTGGAACAATACTC</genome_strand>
        <mrna_strand>ATTATTTCATATCTCAATAAGTTTACTTTGTAAAACAAGTTTGAGGAAAAAAAAAATAATACAAACTTCATCAATGGAAGAAGCAAAGTTGAGAAAGCTAGGTGGTTCTCTGAAAGTCCCTAACGTTCAAGAACTTGCAAAGCAACAACTAGCAGCCGTTCCATCGCGATATATGCGCGATAATATTGAAAATCAATCATATTCTTCCATATTACCTCAAGTTCCAGTTATTGATATGAAAAAATTGCTGGAAATTGGAGATATTGATGATGATTCGGAACTCGTGAGGCTTCATCTCGCTTGCAAAGAATGGGGATTTTTTCAG.....................................................................................................................................................................................................................................................................................................CTGGTGAATCATGGAGTGAATTCCTCATTGATGAAGAAAGTGAAATCGGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGACGAAATTCGAGCAAGAAGAAGGAGATCTCGAAGGATACGGGCAAGCATTTGTTGTATCTGAAGAGCAAAAGTTAGATTGGGCTGATATACTTTACATGATCACTCTCCCTACTCATTTGCGAAAACCTCACTTGTTTCCAAAGCTTCCTGCCTCGTTCAG.......................................................................GGATGCATTGGAACAATACTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E331660" ref_strand="+" ref_description="SGN-E331660 [cTOD-7-G14]">
      <seq>ttatatgatacacgttattatttcatatctcaataagtttactttgtaaaacaagtttgaggaaaaaaaaaataatacaaacttcatcaatggaagaagcaaagttgagaaagctaggtggttctctgaaagtccctaacgttcaagaacttgcaaagcaacaactagcagccgttccatcgcgatatatgcgcgataatattgaaaatcaatcatattcttccatattacctcaagttccagttattgatatgaaaaaattgctggaaattggagatattgatgatgattcggaactcgtgaggcttcatctcgcttgcaaagaatggggattttttcagctggtgaatcatggagtgaattcctcattgatgaagaaagtgaaatcggaaatcagagcatttttcgatctaccaatggaagagaagacgaaattcgagcaagaagaaggagatctcgaaggatacgggcaagcatttgttgtatctgaagagcaaaagttagattgggctgatatactttacatgatcactctccctactcatttgcgaaaacctcacttgtttccaaagcttcctgcctcgttcagggatgcattggaacaatact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="-" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="30327" stop="17608"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30027" g_stop="29689" g_length="339"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="341" r_length="341" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29688" i_stop="29396" i_length="293">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29395" g_stop="29148" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="342" r_stop="589" r_length="248" r_score="0.996"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29147" i_stop="29077" i_length="71">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.784" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29076" g_stop="29057" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="590" r_stop="609" r_length="20" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="-" ref_id="SGN-E331660" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>607</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E331660" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30027" e_stop="29689"/>
          <exon e_start="29395" e_stop="29148"/>
          <exon e_start="29076" e_stop="29057"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATATGATACACGTTATTATTTCATATCTCAATAAGTTTACTTTGTAAAACAAGTTTGAGG-GAGAAAAAA-AATACAAACTTCATCAATGGAAGAAGCAAAGTTGAGAAAGCTAGGTGGTTCTCTGAAAGTCCCTAACGTTCAAGAACTTGCAAAGCAACAACTAGCAGCCGTTCCATCGCGATATATGCGCGATGATATTGAAAATCAATCATATTCTTCCATATTACCTCAAGTTCCAGTTATTGATATGAAAAAATTGCTGGAAATTGGAGATATTGATGATGATTCGGAACTCGTGAGGCTTCATCTCGCTTGCAAAGAATGGGGATTTTTTCAGGTTTATATATCAAAAAAACACTTTTTTTAAAAAAATTATTGTTTTATGTTACAGAAATGTTGGAGTTGACTTATTTAACCATCAATAATACAACTGCACTCCAAAACATACAATAATCTTATTAAATATAACAAGTGATATTCTTTTTTTTGACGTATTGAAACTAACCTAGGAAGAAACAAAATTTAACAATCTTTTTGATTACCGATCATATCTTTTAATTTAAAAATAAACTGATGTATCTTCGTGTCGCATGATGATATCGATTTTTTTAAAAAAAAATACATGTGCAGCTGGTGAATCATGGAGTGAATTCCTCATTGATGAAGAAAGTGAAATCGGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGACGAAATTCGAGCAAGAAGAAGGAGATCTCGAAGGATACGGGCAAGCATTTGTTGTATCTGAAGAACAAAAGTTAGATTGGGCTGATATACTTTACATGATCACTCTCCCTACTCATTTGCGAAAACCTCACTTGTTTCCAAAGCTTCCTGCCTCGTTCAGGTACGATAATATATAACTGAGTTTACGATTAAATATTTAGTTCACAATATTTAAATTCTTGGACCGATAAGGGATGCATTGGAACAATACT</genome_strand>
        <mrna_strand>TTATATGATACACGTTATTATTTCATATCTCAATAAGTTTACTTTGTAAAACAAGTTTGAGGAAAAAAAAAATAATACAAACTTCATCAATGGAAGAAGCAAAGTTGAGAAAGCTAGGTGGTTCTCTGAAAGTCCCTAACGTTCAAGAACTTGCAAAGCAACAACTAGCAGCCGTTCCATCGCGATATATGCGCGATAATATTGAAAATCAATCATATTCTTCCATATTACCTCAAGTTCCAGTTATTGATATGAAAAAATTGCTGGAAATTGGAGATATTGATGATGATTCGGAACTCGTGAGGCTTCATCTCGCTTGCAAAGAATGGGGATTTTTTCAG.....................................................................................................................................................................................................................................................................................................CTGGTGAATCATGGAGTGAATTCCTCATTGATGAAGAAAGTGAAATCGGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGACGAAATTCGAGCAAGAAGAAGGAGATCTCGAAGGATACGGGCAAGCATTTGTTGTATCTGAAGAGCAAAAGTTAGATTGGGCTGATATACTTTACATGATCACTCTCCCTACTCATTTGCGAAAACCTCACTTGTTTCCAAAGCTTCCTGCCTCGTTCAG.......................................................................GGATGCATTGGAACAATACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E331653" ref_strand="+" ref_description="SGN-E331653 [cTOD-7-C16]">
      <seq>ttatattttacacgttattatttcatatgggaatagggttactttgtaaaacaagtttgaggaaaaaaaaaataatacaaacttcatcaatggaagaagcaaagttgagaaagctaggtggttctctgaaagtccctaacgttcaagaacttgcaaagcaacaactagcagccgttccatcgcgatatatgcgcgataatattgaaaatcaatcatattcttccatattacctcaagttccagttattgatatgaaaaaattgctggaaattggagatattgatgatgattcggaactcgtgaggcttcatctcgcttgcaaagaatggggattttttcagctggtgaatcatggagtgaattcctcattgatgaagaaagtgaaatcggaaatcagagcatttttcgatctaccaatggaagagaagacgaaattcgagcaagaagaaggagatctcgaaggatacgggcaagcctttgttggatctgaagagcaaaagttagattgggctgatatactttacatgatcac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="-" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="30327" stop="28905"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30027" g_stop="29689" g_length="339"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="341" r_length="341" r_score="0.959"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29688" i_stop="29396" i_length="293">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29395" g_stop="29205" g_length="191"/>
          <reference_exon_boundary r_type="cDNA" r_start="342" r_stop="532" r_length="191" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="-" ref_id="SGN-E331653" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>530</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E331653" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30027" e_stop="29689"/>
          <exon e_start="29395" e_stop="29205"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATATGATACACGTTATTATTTCATATCTCAATAAGTTTACTTTGTAAAACAAGTTTGAGG-GAGAAAAAA-AATACAAACTTCATCAATGGAAGAAGCAAAGTTGAGAAAGCTAGGTGGTTCTCTGAAAGTCCCTAACGTTCAAGAACTTGCAAAGCAACAACTAGCAGCCGTTCCATCGCGATATATGCGCGATGATATTGAAAATCAATCATATTCTTCCATATTACCTCAAGTTCCAGTTATTGATATGAAAAAATTGCTGGAAATTGGAGATATTGATGATGATTCGGAACTCGTGAGGCTTCATCTCGCTTGCAAAGAATGGGGATTTTTTCAGGTTTATATATCAAAAAAACACTTTTTTTAAAAAAATTATTGTTTTATGTTACAGAAATGTTGGAGTTGACTTATTTAACCATCAATAATACAACTGCACTCCAAAACATACAATAATCTTATTAAATATAACAAGTGATATTCTTTTTTTTGACGTATTGAAACTAACCTAGGAAGAAACAAAATTTAACAATCTTTTTGATTACCGATCATATCTTTTAATTTAAAAATAAACTGATGTATCTTCGTGTCGCATGATGATATCGATTTTTTTAAAAAAAAATACATGTGCAGCTGGTGAATCATGGAGTGAATTCCTCATTGATGAAGAAAGTGAAATCGGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGACGAAATTCGAGCAAGAAGAAGGAGATCTCGAAGGATACGGGCAAGCATTTGTTGTATCTGAAGAACAAAAGTTAGATTGGGCTGATATACTTTACATGATCAC</genome_strand>
        <mrna_strand>TTATATTTTACACGTTATTATTTCATATGGGAATAGGGTTACTTTGTAAAACAAGTTTGAGGAAAAAAAAAATAATACAAACTTCATCAATGGAAGAAGCAAAGTTGAGAAAGCTAGGTGGTTCTCTGAAAGTCCCTAACGTTCAAGAACTTGCAAAGCAACAACTAGCAGCCGTTCCATCGCGATATATGCGCGATAATATTGAAAATCAATCATATTCTTCCATATTACCTCAAGTTCCAGTTATTGATATGAAAAAATTGCTGGAAATTGGAGATATTGATGATGATTCGGAACTCGTGAGGCTTCATCTCGCTTGCAAAGAATGGGGATTTTTTCAG.....................................................................................................................................................................................................................................................................................................CTGGTGAATCATGGAGTGAATTCCTCATTGATGAAGAAAGTGAAATCGGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGACGAAATTCGAGCAAGAAGAAGGAGATCTCGAAGGATACGGGCAAGCCTTTGTTGGATCTGAAGAGCAAAAGTTAGATTGGGCTGATATACTTTACATGATCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E331661" ref_strand="+" ref_description="SGN-E331661 [cTOD-7-G16]">
      <seq>cgaaaaaaaaaataatacaaacttcatcaatggaagaagcaaagttgagaaagcaaggagggtctctgaaagtccctaacgttcaagaacttgcaaagcaacaactagcaggcgttccatcgcgatatatgcgcgataatattgaaaatgaatcatattcttccatattacctcaagttccagttattgatatgaaaaaatagctggaaattggagatattgatgatgattcggaactcgtgaggcttcatctcgcttgcaaagaatggggattttttcagctggtgaatcatggagtgaatccctcattgatgaagaaagtgaaataggaaatcagagcatctttcgatctaccaatggaaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="-" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="30264" stop="29013"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29970" g_stop="29689" g_length="282"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="281" r_length="281" r_score="0.954"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29688" i_stop="29396" i_length="293">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29395" g_stop="29313" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="282" r_stop="364" r_length="83" r_score="0.964"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="-" ref_id="SGN-E331661" ref_strand="+">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>365</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E331661" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29970" e_stop="29689"/>
          <exon e_start="29395" e_stop="29313"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGGGAGAAAAAAAATACAAACTTCATCAATGGAAGAAGCAAAGTTGAGAAAGCTAGGTGGTTCTCTGAAAGTCCCTAACGTTCAAGAACTTGCAAAGCAACAACTAGCAGCCGTTCCATCGCGATATATGCGCGATGATATTGAAAATCAATCATATTCTTCCATATTACCTCAAGTTCCAGTTATTGATATGAAAAAATTGCTGGAAATTGGAGATATTGATGATGATTCGGAACTCGTGAGGCTTCATCTCGCTTGCAAAGAATGGGGATTTTTTCAGGTTTATATATCAAAAAAACACTTTTTTTAAAAAAATTATTGTTTTATGTTACAGAAATGTTGGAGTTGACTTATTTAACCATCAATAATACAACTGCACTCCAAAACATACAATAATCTTATTAAATATAACAAGTGATATTCTTTTTTTTGACGTATTGAAACTAACCTAGGAAGAAACAAAATTTAACAATCTTTTTGATTACCGATCATATCTTTTAATTTAAAAATAAACTGATGTATCTTCGTGTCGCATGATGATATCGATTTTTTTAAAAAAAAATACATGTGCAGCTGGTGAATCATGGAGTGAATTCCTCATTGATGAAGAAAGTGAAATCGGAAATCAGAGCATTTTTCGATCTACCAATGGAAGA</genome_strand>
        <mrna_strand>CGAA-AAAAAAAATAATACAAACTTCATCAATGGAAGAAGCAAAGTTGAGAAAGCAAGGAGGGTCTCTGAAAGTCCCTAACGTTCAAGAACTTGCAAAGCAACAACTAGCAGGCGTTCCATCGCGATATATGCGCGATAATATTGAAAATGAATCATATTCTTCCATATTACCTCAAGTTCCAGTTATTGATATGAAAAAATAGCTGGAAATTGGAGATATTGATGATGATTCGGAACTCGTGAGGCTTCATCTCGCTTGCAAAGAATGGGGATTTTTTCAG.....................................................................................................................................................................................................................................................................................................CTGGTGAATCATGGAGTGAATCCCTCATTGATGAAGAAAGTGAAATAGGAAATCAGAGCATCTTTCGATCTACCAATGGAAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E330172" ref_strand="+" ref_description="SGN-E330172 [cTOD-5-J16]">
      <seq>atacacgttattatttcatatctcaataagtttactttgtaaaacaagtttgaggaaaaaaaaaataatacaaacttcatcaatggaagaagcaaagttgagaaagctaggtggttctctgaaagtccctaacgttcaagaacttgcaaagcaacaactagcagccgttccatcgcgatatatgcgcgataatattgaaaatcaatcatattcttccatattacctcaagttccagttattgatatgaaaaaattgctggaaattggagatattgatgatgattcggaactcgtgaggcttcatctcgcttgcaaagaatggggattttttcagctggtgaatcatggagtgaattcctcattgatgaagaaagtgaaatcggaaatcagagcatttttcgatctaccaatggaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="-" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="30320" stop="29014"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30020" g_stop="29689" g_length="332"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="334" r_length="334" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29688" i_stop="29396" i_length="293">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29395" g_stop="29314" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="335" r_stop="416" r_length="82" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="-" ref_id="SGN-E330172" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>414</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E330172" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30020" e_stop="29689"/>
          <exon e_start="29395" e_stop="29314"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATACACGTTATTATTTCATATCTCAATAAGTTTACTTTGTAAAACAAGTTTGAGG-GAGAAAAAA-AATACAAACTTCATCAATGGAAGAAGCAAAGTTGAGAAAGCTAGGTGGTTCTCTGAAAGTCCCTAACGTTCAAGAACTTGCAAAGCAACAACTAGCAGCCGTTCCATCGCGATATATGCGCGATGATATTGAAAATCAATCATATTCTTCCATATTACCTCAAGTTCCAGTTATTGATATGAAAAAATTGCTGGAAATTGGAGATATTGATGATGATTCGGAACTCGTGAGGCTTCATCTCGCTTGCAAAGAATGGGGATTTTTTCAGGTTTATATATCAAAAAAACACTTTTTTTAAAAAAATTATTGTTTTATGTTACAGAAATGTTGGAGTTGACTTATTTAACCATCAATAATACAACTGCACTCCAAAACATACAATAATCTTATTAAATATAACAAGTGATATTCTTTTTTTTGACGTATTGAAACTAACCTAGGAAGAAACAAAATTTAACAATCTTTTTGATTACCGATCATATCTTTTAATTTAAAAATAAACTGATGTATCTTCGTGTCGCATGATGATATCGATTTTTTTAAAAAAAAATACATGTGCAGCTGGTGAATCATGGAGTGAATTCCTCATTGATGAAGAAAGTGAAATCGGAAATCAGAGCATTTTTCGATCTACCAATGGAAG</genome_strand>
        <mrna_strand>ATACACGTTATTATTTCATATCTCAATAAGTTTACTTTGTAAAACAAGTTTGAGGAAAAAAAAAATAATACAAACTTCATCAATGGAAGAAGCAAAGTTGAGAAAGCTAGGTGGTTCTCTGAAAGTCCCTAACGTTCAAGAACTTGCAAAGCAACAACTAGCAGCCGTTCCATCGCGATATATGCGCGATAATATTGAAAATCAATCATATTCTTCCATATTACCTCAAGTTCCAGTTATTGATATGAAAAAATTGCTGGAAATTGGAGATATTGATGATGATTCGGAACTCGTGAGGCTTCATCTCGCTTGCAAAGAATGGGGATTTTTTCAG.....................................................................................................................................................................................................................................................................................................CTGGTGAATCATGGAGTGAATTCCTCATTGATGAAGAAAGTGAAATCGGAAATCAGAGCATTTTTCGATCTACCAATGGAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E434308" ref_strand="-" ref_description="SGN-E434308 [STM-59-B14]">
      <seq>caagagcctagctacgatcatcgtatgtcaattggccaaggctttaaggatggatgaaaaagaaatgcgagatatattcaatgatggtatgcagtcaatgaggatgaattattatccaccttgccctgagccagacagggcaattggctttagccctcattcttgatgctgatgccctcaccatccttttccaactaaatgaaactgaaggtctccaagtccgaagagacggcatttgggtgcctatacagccccttccaaatgctttgattgtgtatattggcgatatggagatagtaagcaatggtgtttataagagcattgaacacagagcaattgtaaactcaaacaaagagaggctctctgttacagctttctctatcttcaaccttgattccgaattaggacctgcacacagcctcattggaccgaataatcctccaattttccgaagtgttgtcatgcaaaaatatttactggattattttgcacgaaaacttgacggaaaatcataccttgatgtcatgaagttagaggccggtaatggagaatcctaggtagcatttgatatataagttactcttgccattgaaatttgtagttcccctgtttgattactataaaaaaaaaaaaaaaaaaactcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="-" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="43164" stop="24396"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33017" g_stop="32723" g_length="295"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="293" r_length="293" r_score="0.905"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="32722" i_stop="32602" i_length="121">
            <donor d_prob="0.999" d_score="0.86"/>
            <acceptor a_prob="0.999" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="32601" g_stop="32289" g_length="313"/>
          <reference_exon_boundary r_type="cDNA" r_start="294" r_stop="605" r_length="312" r_score="0.907"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="32288" i_stop="31035" i_length="1254">
            <donor d_prob="0.000" d_score="0.84"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31034" g_stop="30996" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="606" r_stop="644" r_length="39" r_score="0.667"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="-" ref_id="SGN-E434308" ref_strand="-">
        <total_alignment_score>0.906</total_alignment_score>
        <cumulative_length_of_scored_exons>647</cumulative_length_of_scored_exons>
        <coverage percentage="1.005" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E434308" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="33017" e_stop="32723"/>
          <exon e_start="32601" e_stop="32289"/>
          <exon e_start="31034" e_stop="30996"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAGAGCCTAGCAATGATCATCGTATGTCACTTGGCAAAGGCTTTAAGGATAGATGAAAATGAAATGAGAGAGCTATTCAGTGATGGTGTGCAGTCAATGAGGATGAATTATTATCCGCCTTGCCCTGAGCCAGACAGGGCAATTGGCTTAAGCCCTCATTC-TGATGCTGATGCCCTCACCATCCTTTTCCAGCTCGATGAAACTGAAGGTCTCCAAGTTCGAAAAGACGACATTTGGGTGCCTATAAAGCCCCTCCCAAATGCTTTGATTGTTAATATTGGCGATATGATGGAGGTAGGTAAATAACAACTTTTTCTTGAAAGAACTTAATGTGGACTAAATATAAAGAAATATCACTAATCCGTTTACTTGGATCGGAAAATGTAATGTAACATGTTTTATTTGACTTTGGCAGATATTGAGCAATGGTGTTTATAAGAGCATTGAGCACAGAGCAATTGTAAACTCAAACAAAGAGAGACTCTCTGTTGCAACATTCTCTACCTTCAACCTTGATTCCGAATTAGGACCTGCACATAGCCTCATTGGAACAAATAATCCTCCAATTTTCCGAAGAGTTGTCGTGCAAAAATATTTACAGGACTTTTTTGCACGAAAACTTGACGGAAAATCATACCTTGATGTCATGAAGGTAGAGGTGAGGAATGGAGAATCCTAGGTAGTATTTGATAATATAATTTACTCTTGGCGTTGAAATCTGGACTTCCATTACTATAAATAAGAAGATTCGAGTCTTCTTCATTTATTTTGTTTTAAGCATGTTCTTCCATCTCAAAAAAATTCATATTTTTTTTTGGAAAAGAGATTAAAAATTCTCCAATCTACTTTTTCCCCCCCTCAAATTAGCTAATGGTCATTTGCAATGTAAAATAGTCACATGCCATATTACGATTCGTCACATATGTAACTTAATTCAAAAGTTAAATCCACCAAATTCTCAAATCCATACCCCGTTATCTTTAACCTAAACCGCCCCTAATTACTTCAATTATATACAAAATATGTATAATATTTGTATGAAATCTGTATCAAAATTGAAGTTTTGAAGCCACAACAGCCACTTTCTCAATCGAAAATTCATAATCAGTTTGGGTGGAAGAAAGCCCCAACCACAGGCGCACTTACGCCGAGGGAAGTTTGGGTTTTCTTCAATGAGAACCTTGCCGGTAACGGATCGGTTCGCCGCCGATCCAATTTAAGAACTGAATCGGGTTTACAAGATGAGGTTTATGCTCAGTAGCAGCTCTTTGTTTAGGAGAAAATCACATCTTTTAACTACTACTAGAACAAAATCAAGGCTAATTGACCCACCTGAGCAAAGATTAATGGTTTACTATGAAATTTGGGATTTTAGAGAGAAGTACTGAATTTGAAGATGACGAAGGATTTACCAGAAGAGTATAAGAAAATGAAGTTAAAATAATTCTATGTTCTTTAGATGGTGAATTTGATTTTGATAATGGTTGCTTTTCTTTGTTATCTAACTATTAGAAAATTTAATAATAGTAAGTATATAAATAAATTTATTTTAACAGCAAGAGTATAATCTAATTAATAAGCTAAAACTGTTAGGTATTTTTGACAGATAATCAAACGACTCATTCTCTATATATATCTTAAATCATTTATAATTTATTTATTTATTATATTTTTATTAGTGTAGACATTGCTGATCAATTTTTTTTTATAAAGAAAAGGAAACATAAATTAAGTGAAAAAAACAGAAGATAAATAATTAATTAAAGTGATGGACAAACGGGATAAGATTTTGAACTTTATGGAGATATTTTGTTAAATTGTTCGGCAGGAACAAATTTGAATACGTAACCTCTGGACTATTTTTGTAATTTTTCCTTTTATTAATAAAAAATTAAATCCCATCTGCACCAAAAGTCACCTGAATATAGGTGACTAATTAGGCAAAATGATTAGAAATTGTAGGTATATTACCAGATGGACCACGTGTTTATTTACCCAAAAAAATGACATAAATAATCTCT</genome_strand>
        <mrna_strand>CAAGAGCCTAGCTACGATCATCGTATGTCAATTGGCCAAGGCTTTAAGGATGGATGAAAAAGAAATGCGAGATATATTCAATGATGGTATGCAGTCAATGAGGATGAATTATTATCCACCTTGCCCTGAGCCAGACAGGGCAATTGGCTTTAGCCCTCATTCTTGATGCTGATGCCCTCACCATCCTTTTCCAACTAAATGAAACTGAAGGTCTCCAAGTCCGAAGAGACGGCATTTGGGTGCCTATACAGCCCCTTCCAAATGCTTTGATTGTGTATATTGGCG--AT-ATGGAG.........................................................................................................................ATAGTAAGCAATGGTGTTTATAAGAGCATTGAACACAGAGCAATTGTAAACTCAAACAAAGAGAGGCTCTCTGTTACAGCTTTCTCTATCTTCAACCTTGATTCCGAATTAGGACCTGCACACAGCCTCATTGGACCGAATAATCCTCCAATTTTCCGAAGTGTTGTCATGCAAAAATATTTACTGGATTATTTTGCACGAAAACTTGACGGAAAATCATACCTTGATGTCATGAAGTTAGAGGCCGGTAATGGAGAATCCTAGGTAGCATTTGAT-ATATAAGTTACTCTTGCCATTGAAATTTGTAGTTCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGTTTGATTACTATAAAAAAAAAAAAAAAAAAACTCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E247762" ref_strand="+" ref_description="SGN-E247762 [cLEF-42-P11]">
      <seq>acaaatacataaacccaaaggtgaatgggatctatagttcgaaggagtcattgtatctatatctctgctattcttttccatcacacgttaataattttcaatttaattactaacaaagagtgacgacggtggccaaaatgaactttggaaaatctctgttagttcctagtgcccaagagcttgccaaacagcatctaaccaatattcccgccacgtatgtccgcccagaagaagaatctcccgtcatctatgccagagcatccgtcccagttatcgatctctacaagttgatttccatggattctgagctgcaaaagcttcactcggcttgccaacaatggggtttcctccaggttataaaccatggagtgacatcttcgttgttggaggatttcaagagagaggttattgatttgttcaaacttccaatggaagaaaagaagaaactatggcaacaggaagacagctttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="-" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="34176" stop="33013"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33876" g_stop="33524" g_length="353"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="353" r_length="353" r_score="0.955"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="33523" i_stop="33431" i_length="93">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.966" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="33430" g_stop="33313" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="354" r_stop="471" r_length="118" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="-" ref_id="SGN-E247762" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>471</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E247762" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33876" e_stop="33524"/>
          <exon e_start="33430" e_stop="33313"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAATAGATAAACCCAAAGGTGAATGGGATCTATAGTTTGAAGGAGTCATTGTATCTATATCTCTGCTATTCTTTTCCATCAGACGTTAATAATTTTCAATTTAATTACTAACAAAGAGTGACGACGGTGGCAAAAATGAACTTTGGAAAATCTCTGTTAGTTCCTAGTGTTCAAGAGCTTGCCAAACAGCATCTAACCAATATTCCGGCCAGGTATGTCCGCCCAGAAGAAGAATCTCCGGTCATATATGCCGGAGCATCGGTCCCAGTTATCGATCTTCAAAAGTTGATTTCCATGGATTCTGAGCTGCAAAAGCTTCACTCGGCTTGCCAACAATGGGGTTTCCTCCAGGTTCCATTTTTTTTTTTTTGCTTTGAAAATGGTTCTTAAGGGGTATATGTATTGACCTTTTGAGAAATTAGCTTGCATATTATTGAATGATAGGTTATAAACCATGGAGTGACATCTTCGTTGTTGGAGGATTTCAAGAGAGAGGTTATTGATTTGTTCAAACTTCCAATGGAAGAAAAGAAGAAACTATGGCAACAGGAAGACAGCTTTG</genome_strand>
        <mrna_strand>ACAAATACATAAACCCAAAGGTGAATGGGATCTATAGTTCGAAGGAGTCATTGTATCTATATCTCTGCTATTCTTTTCCATCACACGTTAATAATTTTCAATTTAATTACTAACAAAGAGTGACGACGGTGGCCAAAATGAACTTTGGAAAATCTCTGTTAGTTCCTAGTGCCCAAGAGCTTGCCAAACAGCATCTAACCAATATTCCCGCCACGTATGTCCGCCCAGAAGAAGAATCTCCCGTCATCTATGCCAGAGCATCCGTCCCAGTTATCGATCTCTACAAGTTGATTTCCATGGATTCTGAGCTGCAAAAGCTTCACTCGGCTTGCCAACAATGGGGTTTCCTCCAG.............................................................................................GTTATAAACCATGGAGTGACATCTTCGTTGTTGGAGGATTTCAAGAGAGAGGTTATTGATTTGTTCAAACTTCCAATGGAAGAAAAGAAGAAACTATGGCAACAGGAAGACAGCTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E395848" ref_strand="+" ref_description="SGN-E395848 [TUS-17-P18]">
      <seq>cccggaaaaattgaactttggaaaatctctgttagttccaagtgttcaagagcttgccaaacagcacctaaccattatcccagacaggtatctccagccagagcaagaaactccggtcatttccgccggagcggaggttccagttatcgatgttcaaaagttgatttcaggtgattccatggattctgagctgcaaaagcttcactctgcttgccaacaatggggtttcctacaggttataaaccatggggtgacacctttgctcttggaggacttcaagagagaggttattgaattgttcaaacttccaatggaagaaaagaagaagctatggaaacaggaagacagcttggaaggtttcgggcatgcattcgttgtgtctgaagagcagaaacttgattggagtgacaggtttggcatactgactcttcctcctcatatccgcaaagtggatttgtttcagaagttgccctcgaagctcagggatatcatggaagcatactgcaaagaaattaagagcctagcaacgagcattatatgtcaattggcaaaggctttaaggatggacgaagaggaaatgagagatctattcaatgatggtatgcagacgctgaggatgaattattatccgccttgccctgagccagacaaggcaattggcataacccctcattctgatgccgatgcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="-" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="39412" stop="37304"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="39112" g_stop="38878" g_length="235"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="235" r_length="235" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="38877" i_stop="38265" i_length="613">
            <donor d_prob="0.965" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="38264" g_stop="38017" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="236" r_stop="483" r_length="248" r_score="0.996"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="38016" i_stop="37809" i_length="208">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="37808" g_stop="37604" g_length="205"/>
          <reference_exon_boundary r_type="cDNA" r_start="484" r_stop="688" r_length="205" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="-" ref_id="SGN-E395848" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>688</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E395848" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="39112" e_stop="38878"/>
          <exon e_start="38264" e_stop="38017"/>
          <exon e_start="37808" e_stop="37604"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCGGAAAAATTGAACTTTGGAAAATCTCTGTTAGTTCCAAGTGTTCAAGAGCTTGCCAAACAGCACCTAACCATTATCCCAGACAGGTATCTCCGGCCAGAGCAAGAAACTCCGGTCATTTCCGCCGGAGCGGAGGTTCCAGTTATCGATGTTCAAAAGTTGATTTCAGGTGATTCCATGGATTCTGAGCTGCAAAAGCTTCACTCTGCTTGCCAACAATGGGGTTTCCTACAGGTTTCATGTTCTTCATGATTTTGTTTTATTGTGCGAATAAATTTTATTTGCGAAGCTTCAAAAACACTCCTAAAGTTTATGTTTTTCTCTCACTAATGTGAATTTCCTACTTTTAACTATTAACAAATGTTTATCGAAATACAATTCATGTATCAAATGTTCATTTTTACTACGATGATATTTCAAGTAGGAAAAGGATACAACTGTAGTAGAAATAAGCAACTTTTATAAATCTTGGCCAAACATATTCTATTCTTAACGTTATTTTCATCTATTTAGTTCAAATTAAACATATAAGACATGTAAAAACTTATTTTCAGCTTTCCTTCCCCCATTAAAAGTGTTCAGATTTTAAATAAACTGTAATATCAGAATAATAGATTCTAAAATGCATAATCCTTTGTTAAGGGAAAAATTCCCACATCGGTTGGGCTCGTTATAAGGCGTGACCAATCCTCCTCCCTATGAGTTAGCTTTTGGGGCGTGAGTTAGGCCCAAACCTAATTTTAACAAAGATCACTTTAGAAAAGTGACTTCTTGTTTTCTTGTAGAGTGCCTAGATTTGTAATTTTTAAAAGGTTAATGAATTTGCTAGCATATTGTTGAATGTTAGGTTATAAACCATGGGGTGACACCTTTGCTCTTGGAGGACTTCAAGAGAGAGGTTATTGAATTGTTCAAACTTCCAATGGAAGAAAAGAAGAAGCTATGGAAACAGGAAGACAGCTTGGAAGGTTTCGGGCATGCATTCGTTGTGTCTGAAGATCAGAAACTTGATTGGAGTGACAGGTTTGGCATACTGACTCTTCCTCCTCATATCCGCAAAGTGGATTTGTTTCAGAAGTTGCCCTCGAAGCTCAGGTGCCTGTCTCCTTACTAGATTATTACTCTATTTGAGTGTTCATTACTTAAACAATCATTGATAAAGGAGAACACAATTACTTTTGGTTTTTTATAAATTAGGTAACCAGATTGTTAACTATACTTTTTGTTAAAAACTTGTATTTCTAACTTGTGCCTTGATCTTCGCACTCTAAGATTTTAATATGTTTATGTGTTTGAAATGCAGGGATATCATGGAAGCATACTGCAAAGAAATTAAGAGCCTAGCAACGAGCATTATATGTCAATTGGCAAAGGCTTTAAGGATGGACGAAGAGGAAATGAGAGATCTATTCAATGATGGTATGCAGACGCTGAGGATGAATTATTATCCGCCTTGCCCTGAGCCAGACAAGGCAATTGGCATAAGCCCTCATTCTGATGCCGATGCC</genome_strand>
        <mrna_strand>CCCGGAAAAATTGAACTTTGGAAAATCTCTGTTAGTTCCAAGTGTTCAAGAGCTTGCCAAACAGCACCTAACCATTATCCCAGACAGGTATCTCCAGCCAGAGCAAGAAACTCCGGTCATTTCCGCCGGAGCGGAGGTTCCAGTTATCGATGTTCAAAAGTTGATTTCAGGTGATTCCATGGATTCTGAGCTGCAAAAGCTTCACTCTGCTTGCCAACAATGGGGTTTCCTACAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATAAACCATGGGGTGACACCTTTGCTCTTGGAGGACTTCAAGAGAGAGGTTATTGAATTGTTCAAACTTCCAATGGAAGAAAAGAAGAAGCTATGGAAACAGGAAGACAGCTTGGAAGGTTTCGGGCATGCATTCGTTGTGTCTGAAGAGCAGAAACTTGATTGGAGTGACAGGTTTGGCATACTGACTCTTCCTCCTCATATCCGCAAAGTGGATTTGTTTCAGAAGTTGCCCTCGAAGCTCAG................................................................................................................................................................................................................GGATATCATGGAAGCATACTGCAAAGAAATTAAGAGCCTAGCAACGAGCATTATATGTCAATTGGCAAAGGCTTTAAGGATGGACGAAGAGGAAATGAGAGATCTATTCAATGATGGTATGCAGACGCTGAGGATGAATTATTATCCGCCTTGCCCTGAGCCAGACAAGGCAATTGGCATAACCCCTCATTCTGATGCCGATGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E207227" ref_strand="+" ref_description="SGN-E207227 [cLEC-30-B22]">
      <seq>ccggaaaaattgaactttggaaaatctctgttagttccaagtgttcaagagcttgccaaacagcacctaaccattatcccagacaggtatctccagccagagcaagaaactccggtcatttccgccggagcggaggttccagttatcgatgttcaaaagttgatttcaggtgattccatggattctgagctgcaaaagcttcactctgcttgccaacaatggggtttcctacaggttataaaccatggggtgacacctttgctcttggaggacttcaagagagaggttattgaattgttcaaacttccaatggaagaaaagaagaagctatggaaacaggaagacagcttggaaggtttcgggcatgcattcgttgtgtctgaagagcacaaacttgattggagtgacaggtttggcatactgactcttcctcctcatatccgcaaagtggatttgtttcagaagttgccctcgaagctcagggatatcatggaagcatactgcaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="-" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="39411" stop="37483"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="39111" g_stop="38878" g_length="234"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="234" r_length="234" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="38877" i_stop="38265" i_length="613">
            <donor d_prob="0.965" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="38264" g_stop="38017" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="235" r_stop="482" r_length="248" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="38016" i_stop="37809" i_length="208">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="37808" g_stop="37783" g_length="26"/>
          <reference_exon_boundary r_type="cDNA" r_start="483" r_stop="508" r_length="26" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="-" ref_id="SGN-E207227" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>508</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E207227" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="39111" e_stop="38878"/>
          <exon e_start="38264" e_stop="38017"/>
          <exon e_start="37808" e_stop="37783"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGGAAAAATTGAACTTTGGAAAATCTCTGTTAGTTCCAAGTGTTCAAGAGCTTGCCAAACAGCACCTAACCATTATCCCAGACAGGTATCTCCGGCCAGAGCAAGAAACTCCGGTCATTTCCGCCGGAGCGGAGGTTCCAGTTATCGATGTTCAAAAGTTGATTTCAGGTGATTCCATGGATTCTGAGCTGCAAAAGCTTCACTCTGCTTGCCAACAATGGGGTTTCCTACAGGTTTCATGTTCTTCATGATTTTGTTTTATTGTGCGAATAAATTTTATTTGCGAAGCTTCAAAAACACTCCTAAAGTTTATGTTTTTCTCTCACTAATGTGAATTTCCTACTTTTAACTATTAACAAATGTTTATCGAAATACAATTCATGTATCAAATGTTCATTTTTACTACGATGATATTTCAAGTAGGAAAAGGATACAACTGTAGTAGAAATAAGCAACTTTTATAAATCTTGGCCAAACATATTCTATTCTTAACGTTATTTTCATCTATTTAGTTCAAATTAAACATATAAGACATGTAAAAACTTATTTTCAGCTTTCCTTCCCCCATTAAAAGTGTTCAGATTTTAAATAAACTGTAATATCAGAATAATAGATTCTAAAATGCATAATCCTTTGTTAAGGGAAAAATTCCCACATCGGTTGGGCTCGTTATAAGGCGTGACCAATCCTCCTCCCTATGAGTTAGCTTTTGGGGCGTGAGTTAGGCCCAAACCTAATTTTAACAAAGATCACTTTAGAAAAGTGACTTCTTGTTTTCTTGTAGAGTGCCTAGATTTGTAATTTTTAAAAGGTTAATGAATTTGCTAGCATATTGTTGAATGTTAGGTTATAAACCATGGGGTGACACCTTTGCTCTTGGAGGACTTCAAGAGAGAGGTTATTGAATTGTTCAAACTTCCAATGGAAGAAAAGAAGAAGCTATGGAAACAGGAAGACAGCTTGGAAGGTTTCGGGCATGCATTCGTTGTGTCTGAAGATCAGAAACTTGATTGGAGTGACAGGTTTGGCATACTGACTCTTCCTCCTCATATCCGCAAAGTGGATTTGTTTCAGAAGTTGCCCTCGAAGCTCAGGTGCCTGTCTCCTTACTAGATTATTACTCTATTTGAGTGTTCATTACTTAAACAATCATTGATAAAGGAGAACACAATTACTTTTGGTTTTTTATAAATTAGGTAACCAGATTGTTAACTATACTTTTTGTTAAAAACTTGTATTTCTAACTTGTGCCTTGATCTTCGCACTCTAAGATTTTAATATGTTTATGTGTTTGAAATGCAGGGATATCATGGAAGCATACTGCAAAG</genome_strand>
        <mrna_strand>CCGGAAAAATTGAACTTTGGAAAATCTCTGTTAGTTCCAAGTGTTCAAGAGCTTGCCAAACAGCACCTAACCATTATCCCAGACAGGTATCTCCAGCCAGAGCAAGAAACTCCGGTCATTTCCGCCGGAGCGGAGGTTCCAGTTATCGATGTTCAAAAGTTGATTTCAGGTGATTCCATGGATTCTGAGCTGCAAAAGCTTCACTCTGCTTGCCAACAATGGGGTTTCCTACAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATAAACCATGGGGTGACACCTTTGCTCTTGGAGGACTTCAAGAGAGAGGTTATTGAATTGTTCAAACTTCCAATGGAAGAAAAGAAGAAGCTATGGAAACAGGAAGACAGCTTGGAAGGTTTCGGGCATGCATTCGTTGTGTCTGAAGAGCACAAACTTGATTGGAGTGACAGGTTTGGCATACTGACTCTTCCTCCTCATATCCGCAAAGTGGATTTGTTTCAGAAGTTGCCCTCGAAGCTCAG................................................................................................................................................................................................................GGATATCATGGAAGCATACTGCAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E319740" ref_strand="+" ref_description="SGN-E319740 [cTOB-12-C24]">
      <seq>tgattaaaaacccaaacccgaatttgatagaaattttcaagtttgtaacaagagccaatggattcaaccccggaaaaattgaactttggaaaatctctgttagttccaagtgttcaagagcttgccaaacagcacctaaccattatcccagacaggtatctccagccagagcaagaaactccggtcatttccgccggagcggaggttccagttatcgatgttcaaaagttgatttcaggtgattccatggattctgagctgcaaaagcttcactctgcttgccaacaatggggtttcctacaggttataaaccatggggtgacacctttgctcttggaggacttcaagagagaggttattgaattgttcaaacttccaatggaagaaaagaagaagctatggaaacaggaagacagcttggaaggtttcgggcatgcattcgttgtgtctgaagagcagaaacttgattggagtgacaggtttggcatactgactcttcctcctcatatccgcaaagtggatttgtttcagaagttgccctcgaagctcagggatatcatggaagcatact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="-" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="39480" stop="37489"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="39180" g_stop="38878" g_length="303"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="303" r_length="303" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="38877" i_stop="38265" i_length="613">
            <donor d_prob="0.965" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="38264" g_stop="38017" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="304" r_stop="551" r_length="248" r_score="0.996"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="38016" i_stop="37809" i_length="208">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="37808" g_stop="37789" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="552" r_stop="571" r_length="20" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="-" ref_id="SGN-E319740" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>571</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E319740" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="39180" e_stop="38878"/>
          <exon e_start="38264" e_stop="38017"/>
          <exon e_start="37808" e_stop="37789"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATTAAAAACCCAAACCCGAATTTGATAGAAATTTTCAAGTTTGTAACAAGAGCCAATGGATTCAACCCCGGAAAAATTGAACTTTGGAAAATCTCTGTTAGTTCCAAGTGTTCAAGAGCTTGCCAAACAGCACCTAACCATTATCCCAGACAGGTATCTCCGGCCAGAGCAAGAAACTCCGGTCATTTCCGCCGGAGCGGAGGTTCCAGTTATCGATGTTCAAAAGTTGATTTCAGGTGATTCCATGGATTCTGAGCTGCAAAAGCTTCACTCTGCTTGCCAACAATGGGGTTTCCTACAGGTTTCATGTTCTTCATGATTTTGTTTTATTGTGCGAATAAATTTTATTTGCGAAGCTTCAAAAACACTCCTAAAGTTTATGTTTTTCTCTCACTAATGTGAATTTCCTACTTTTAACTATTAACAAATGTTTATCGAAATACAATTCATGTATCAAATGTTCATTTTTACTACGATGATATTTCAAGTAGGAAAAGGATACAACTGTAGTAGAAATAAGCAACTTTTATAAATCTTGGCCAAACATATTCTATTCTTAACGTTATTTTCATCTATTTAGTTCAAATTAAACATATAAGACATGTAAAAACTTATTTTCAGCTTTCCTTCCCCCATTAAAAGTGTTCAGATTTTAAATAAACTGTAATATCAGAATAATAGATTCTAAAATGCATAATCCTTTGTTAAGGGAAAAATTCCCACATCGGTTGGGCTCGTTATAAGGCGTGACCAATCCTCCTCCCTATGAGTTAGCTTTTGGGGCGTGAGTTAGGCCCAAACCTAATTTTAACAAAGATCACTTTAGAAAAGTGACTTCTTGTTTTCTTGTAGAGTGCCTAGATTTGTAATTTTTAAAAGGTTAATGAATTTGCTAGCATATTGTTGAATGTTAGGTTATAAACCATGGGGTGACACCTTTGCTCTTGGAGGACTTCAAGAGAGAGGTTATTGAATTGTTCAAACTTCCAATGGAAGAAAAGAAGAAGCTATGGAAACAGGAAGACAGCTTGGAAGGTTTCGGGCATGCATTCGTTGTGTCTGAAGATCAGAAACTTGATTGGAGTGACAGGTTTGGCATACTGACTCTTCCTCCTCATATCCGCAAAGTGGATTTGTTTCAGAAGTTGCCCTCGAAGCTCAGGTGCCTGTCTCCTTACTAGATTATTACTCTATTTGAGTGTTCATTACTTAAACAATCATTGATAAAGGAGAACACAATTACTTTTGGTTTTTTATAAATTAGGTAACCAGATTGTTAACTATACTTTTTGTTAAAAACTTGTATTTCTAACTTGTGCCTTGATCTTCGCACTCTAAGATTTTAATATGTTTATGTGTTTGAAATGCAGGGATATCATGGAAGCATACT</genome_strand>
        <mrna_strand>TGATTAAAAACCCAAACCCGAATTTGATAGAAATTTTCAAGTTTGTAACAAGAGCCAATGGATTCAACCCCGGAAAAATTGAACTTTGGAAAATCTCTGTTAGTTCCAAGTGTTCAAGAGCTTGCCAAACAGCACCTAACCATTATCCCAGACAGGTATCTCCAGCCAGAGCAAGAAACTCCGGTCATTTCCGCCGGAGCGGAGGTTCCAGTTATCGATGTTCAAAAGTTGATTTCAGGTGATTCCATGGATTCTGAGCTGCAAAAGCTTCACTCTGCTTGCCAACAATGGGGTTTCCTACAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATAAACCATGGGGTGACACCTTTGCTCTTGGAGGACTTCAAGAGAGAGGTTATTGAATTGTTCAAACTTCCAATGGAAGAAAAGAAGAAGCTATGGAAACAGGAAGACAGCTTGGAAGGTTTCGGGCATGCATTCGTTGTGTCTGAAGAGCAGAAACTTGATTGGAGTGACAGGTTTGGCATACTGACTCTTCCTCCTCATATCCGCAAAGTGGATTTGTTTCAGAAGTTGCCCTCGAAGCTCAG................................................................................................................................................................................................................GGATATCATGGAAGCATACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E208253" ref_strand="+" ref_description="SGN-E208253 [cLEC-37-N11]">
      <seq>ccggaaaaattgaactttggaaaatctctgttagttccaagcgtgcaagagcttgccaaacagcacctaaccattattccagacaggtatctgcagccagagcaagaaactccggtcatttccgccggagcggaggttccagttatggatgttcaaaagttgatttcaggtgattccatggattctgagctgcaaaagcttcactctgcttgccaacaatggggtttactacaggttataaaccatggggtgacacctttgctcttggaggacttcaagagagaggatattgagttgttcaaacttccagtggaagaaaagaagaagctgtggaaacaggaagacagcttgtaaggcttcgggcatgcattcgttgtgtctgaagagcagaaacttgattggagtgacagggatggcatactgactc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="-" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="39411" stop="37772"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="39111" g_stop="38878" g_length="234"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="234" r_length="234" r_score="0.970"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="38877" i_stop="38265" i_length="613">
            <donor d_prob="0.965" d_score="0.98"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="38264" g_stop="38072" g_length="193"/>
          <reference_exon_boundary r_type="cDNA" r_start="235" r_stop="427" r_length="193" r_score="0.953"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="-" ref_id="SGN-E208253" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>427</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E208253" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="39111" e_stop="38878"/>
          <exon e_start="38264" e_stop="38072"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGGAAAAATTGAACTTTGGAAAATCTCTGTTAGTTCCAAGTGTTCAAGAGCTTGCCAAACAGCACCTAACCATTATCCCAGACAGGTATCTCCGGCCAGAGCAAGAAACTCCGGTCATTTCCGCCGGAGCGGAGGTTCCAGTTATCGATGTTCAAAAGTTGATTTCAGGTGATTCCATGGATTCTGAGCTGCAAAAGCTTCACTCTGCTTGCCAACAATGGGGTTTCCTACAGGTTTCATGTTCTTCATGATTTTGTTTTATTGTGCGAATAAATTTTATTTGCGAAGCTTCAAAAACACTCCTAAAGTTTATGTTTTTCTCTCACTAATGTGAATTTCCTACTTTTAACTATTAACAAATGTTTATCGAAATACAATTCATGTATCAAATGTTCATTTTTACTACGATGATATTTCAAGTAGGAAAAGGATACAACTGTAGTAGAAATAAGCAACTTTTATAAATCTTGGCCAAACATATTCTATTCTTAACGTTATTTTCATCTATTTAGTTCAAATTAAACATATAAGACATGTAAAAACTTATTTTCAGCTTTCCTTCCCCCATTAAAAGTGTTCAGATTTTAAATAAACTGTAATATCAGAATAATAGATTCTAAAATGCATAATCCTTTGTTAAGGGAAAAATTCCCACATCGGTTGGGCTCGTTATAAGGCGTGACCAATCCTCCTCCCTATGAGTTAGCTTTTGGGGCGTGAGTTAGGCCCAAACCTAATTTTAACAAAGATCACTTTAGAAAAGTGACTTCTTGTTTTCTTGTAGAGTGCCTAGATTTGTAATTTTTAAAAGGTTAATGAATTTGCTAGCATATTGTTGAATGTTAGGTTATAAACCATGGGGTGACACCTTTGCTCTTGGAGGACTTCAAGAGAGAGGTTATTGAATTGTTCAAACTTCCAATGGAAGAAAAGAAGAAGCTATGGAAACAGGAAGACAGCTTGGAAGGTTTCGGGCATGCATTCGTTGTGTCTGAAGATCAGAAACTTGATTGGAGTGACAGGTTTGGCATACTGACTC</genome_strand>
        <mrna_strand>CCGGAAAAATTGAACTTTGGAAAATCTCTGTTAGTTCCAAGCGTGCAAGAGCTTGCCAAACAGCACCTAACCATTATTCCAGACAGGTATCTGCAGCCAGAGCAAGAAACTCCGGTCATTTCCGCCGGAGCGGAGGTTCCAGTTATGGATGTTCAAAAGTTGATTTCAGGTGATTCCATGGATTCTGAGCTGCAAAAGCTTCACTCTGCTTGCCAACAATGGGGTTTACTACAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATAAACCATGGGGTGACACCTTTGCTCTTGGAGGACTTCAAGAGAGAGGATATTGAGTTGTTCAAACTTCCAGTGGAAGAAAAGAAGAAGCTGTGGAAACAGGAAGACAGCTTGTAAGGCTTCGGGCATGCATTCGTTGTGTCTGAAGAGCAGAAACTTGATTGGAGTGACAGGGATGGCATACTGACTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E395442" ref_strand="+" ref_description="SGN-E395442 [TUS-16-K20](-)">
      <seq>gccagacagggcaattggcttaagccctcattctgatgcagatgccctcaccatcctcttccagctcaatgaaactgaaggtctccaagtccgaaaagacgatatttgggtgcctataacgcccctcccaaatgctttgattgtcaatattggcgatatgatggagatagtgagcaatggtgtctataggagcattgagcatagagcaattgtaaactcatatgaagaacgtctctctgttgcaacattctacaacatcaaccttgagtccgagttaggacctgcacacagccttattggaccacataatcctcccattttccgaagagttcctgtgcaaaaatatttacaggacttttttgcacgaaaacttgatggaaaatcgtatcttgattccatgaaggtcgacgcgagggatgatgaatcataggtagaatctgatatatgtctgtcttgttgttgtaatttggagttcccctgttttctatttgttagctgtattgacgtgaagcaaatattaatatgtggattgctttagacactatatttttgggttgagaggaatttccatgaatttattttagaggaaaatacacgactatcccctaaaagttgcagtgaagtcgaatcgtactaaagataaaattatttttaaaaaatagtaaagttaattttttttctcgataaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="-" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="43035" stop="41534"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="42735" g_stop="42570" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="166" r_length="166" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="42569" i_stop="42363" i_length="207">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42362" g_stop="41832" g_length="531"/>
          <reference_exon_boundary r_type="cDNA" r_start="167" r_stop="697" r_length="531" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="-" ref_id="SGN-E395442" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>697</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E395442" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="42735" e_stop="42570"/>
          <exon e_start="42362" e_stop="41832"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCAGACAGGGCAATTGGCTTAAGCCCTCATTCTGATGCAGATGCCCTCACCATCCTCTTCCAGCTCAATGAAACTGAAGGTCTCCAAGTCCGAAAAGACGATATTTGGGTGCCTATAACGCCCCTCCCAAATGCTTTGATTGTCAATATTGGCGATATGATGGAGGTAAATAACAAACCTTTTACTGAGTAATTTATTTCTCAAAGGGTAGGCGTTAGCCACATATGATAATTGTAGTTTTTGTGTTGCAAGTTATCGTTTTAGTTTGGTTTTGATTCACAGTATCATGCATCATGGTTCACGTGTTTAACACTTCTGAATTTTCATGAAAGTACTTAATTGACGAAAAATGTGTTTATTTGACTTTGGCAGATAGTGAGCAATGGTGTCTATAGGAGCATTGAGCATAGAGCAATTGTAAACTCATATGAAGAACGTCTCTCTGTTGCAACATTCTACAACATCAACCTTGAGTCCGAGTTAGGACCTGCACACAGCCTTATTGGACCACATAATCCTCCCATTTTCCGAAGAGTTCCTGTGCAAAAATATTTACAGGACTTTTTTGCACGAAAACTTGATGGAAAATCGTATCTTGATTCCATGAAGGTCGACGCGAGGGATGATGAATCATAGGTAGAATCTGATATATGTCTGTCTTGTTGTTGTAATTTGGAGTTCCCCTGTTTTCTATTTGTTAGCTGTATTGACGTGAAGCAAATATTAATATGTGGATTGCTTTAGACACTATATTTTTGGGTTGAGAGGAATTTCCATGAATTTATTTTAGAGGAAAATACACGACTATCCCCTAAAAGTTGCAGTGAAGTCGGATCGTACTAGAGATAAAATTATTTTTAAAAAATAGTAAAGTTAATTTTTTTTCTCGATAAAAACAGAATG</genome_strand>
        <mrna_strand>GCCAGACAGGGCAATTGGCTTAAGCCCTCATTCTGATGCAGATGCCCTCACCATCCTCTTCCAGCTCAATGAAACTGAAGGTCTCCAAGTCCGAAAAGACGATATTTGGGTGCCTATAACGCCCCTCCCAAATGCTTTGATTGTCAATATTGGCGATATGATGGAG...............................................................................................................................................................................................................ATAGTGAGCAATGGTGTCTATAGGAGCATTGAGCATAGAGCAATTGTAAACTCATATGAAGAACGTCTCTCTGTTGCAACATTCTACAACATCAACCTTGAGTCCGAGTTAGGACCTGCACACAGCCTTATTGGACCACATAATCCTCCCATTTTCCGAAGAGTTCCTGTGCAAAAATATTTACAGGACTTTTTTGCACGAAAACTTGATGGAAAATCGTATCTTGATTCCATGAAGGTCGACGCGAGGGATGATGAATCATAGGTAGAATCTGATATATGTCTGTCTTGTTGTTGTAATTTGGAGTTCCCCTGTTTTCTATTTGTTAGCTGTATTGACGTGAAGCAAATATTAATATGTGGATTGCTTTAGACACTATATTTTTGGGTTGAGAGGAATTTCCATGAATTTATTTTAGAGGAAAATACACGACTATCCCCTAAAAGTTGCAGTGAAGTCGAATCGTACTAAAGATAAAATTATTTTTAAAAAATAGTAAAGTTAATTTTTTTTCTCGATAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E575245" ref_strand="-" ref_description="SGN-E575245 [34840]">
      <seq>gtatgtcaattcgccaaaggcctttaaaggatggatgaaaaagaatatgcgagatctattcaagtgatggtatgcagtcaatgagaatgaattattatcccgccttgtcctgagccagacagggcaattggcttaagccctcattctgatgcggatgccctcaccatcctcttccagctcaatgaaactgaaggtctccaagtcagaaaagacgatatttgggtgcctataaaggccctcccaaatgctttgattgtcaatattggcgatatgatggagatagtgagcaatggtgtctatagaagcattgagcatagagcaactgtaaactcaaatgaagaacgactctctgttgcgacattctataacatcaaccttgagtccgagttaggacctgcacacagcctcattggaccacataatcctcccattttccgaagagtttctgtgcacaaatatttacaggacttttttgcacgaaaacttgatggaaaatcgtaccttgatttcatgaaggtcgaggcaagggatgatgaatcataggtagcatttgatataagttactcttgctgttgtaatttagagttccctgtttgattactataaataagaagaatagagtactcttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="-" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="43142" stop="36596"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="42842" g_stop="42570" g_length="273"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="279" r_length="279" r_score="0.930"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="42569" i_stop="42363" i_length="207">
            <donor d_prob="0.976" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42362" g_stop="42032" g_length="331"/>
          <reference_exon_boundary r_type="cDNA" r_start="280" r_stop="609" r_length="330" r_score="0.903"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42031" i_stop="41945" i_length="87">
            <donor d_prob="0.000" d_score="0.68"/>
            <acceptor a_prob="0.875" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="41944" g_stop="41925" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="610" r_stop="629" r_length="20" r_score="0.650"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="-" ref_id="SGN-E575245" ref_strand="-">
        <total_alignment_score>0.916</total_alignment_score>
        <cumulative_length_of_scored_exons>624</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E575245" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="42842" e_stop="42570"/>
          <exon e_start="42362" e_stop="42032"/>
          <exon e_start="41944" e_stop="41925"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTATGTCAATTGGCC-AAGGC-TTT-AAGGATGGATGAAAAAGAA-ATGCGAGATCTATTC-AGTGATGGTATGCAGTCAATAAGGATGAATTATTATCCC-CCTTGTCCTGAGCCAGACAGGGCAATTGGCTTAAGCCCTCATTCTGATGCAGATGCCCTCACCATCCTCTTCCAGCTCAATGAAACTGAAGGTCTCCAAGTCCGAAAAGACGATATTTGGGTGCCTATAACGCCCCTCCCAAATGCTTTGATTGTCAATATTGGCGATATGATGGAGGTAAATAACAAACCTTTTACTGAGTAATTTATTTCTCAAAGGGTAGGCGTTAGCCACATATGATAATTGTAGTTTTTGTGTTGCAAGTTATCGTTTTAGTTTGGTTTTGATTCACAGTATCATGCATCATGGTTCACGTGTTTAACACTTCTGAATTTTCATGAAAGTACTTAATTGACGAAAAATGTGTTTATTTGACTTTGGCAGATAGTGAGCAATGGTGTCTATAGGAGCATTGAGCATAGAGCAATTGTAAACTCATATGAAGAACGTCTCTCTGTTGCAACATTCTACAACATCAACCTTGAGTCCGAGTTAGGACCTGCACACAGCCTTATTGGACCACATAATCCTCCCATTTTCCGAAGAGTTCCTGTGCAAAAATATTTACAGGACTTTTTTGCACGAAAACTTGATGGAAAATCGTATCTTGATTCCATGAAGGTCGACGCGAGGGATGATGAATCATAGGTAGAATCTGATATATGTCTGTCTTGTTGTTGTAATTTGGAGTTCCCCTGTTTTCTATTTGTTAGCTGTATTGACGTGAAGCAAATATTAATATGTGGATTGCTTTAGACACTATATTTTTGGGTTGAGAGGAATTTCCATGAATTTATTTTAGAGGAAAATACACGACTATCC</genome_strand>
        <mrna_strand>GTATGTCAATTCGCCAAAGGCCTTTAAAGGATGGATGAAAAAGAATATGCGAGATCTATTCAAGTGATGGTATGCAGTCAATGAGAATGAATTATTATCCCGCCTTGTCCTGAGCCAGACAGGGCAATTGGCTTAAGCCCTCATTCTGATGCGGATGCCCTCACCATCCTCTTCCAGCTCAATGAAACTGAAGGTCTCCAAGTCAGAAAAGACGATATTTGGGTGCCTATAAAGGCCCTCCCAAATGCTTTGATTGTCAATATTGGCGATATGATGGAG...............................................................................................................................................................................................................ATAGTGAGCAATGGTGTCTATAGAAGCATTGAGCATAGAGCAACTGTAAACTCAAATGAAGAACGACTCTCTGTTGCGACATTCTATAACATCAACCTTGAGTCCGAGTTAGGACCTGCACACAGCCTCATTGGACCACATAATCCTCCCATTTTCCGAAGAGTTTCTGTGCACAAATATTTACAGGACTTTTTTGCACGAAAACTTGATGGAAAATCGTACCTTGATTTCATGAAGGTCGAGGCAAGGGATGATGAATCATAGGTAGCATTTGATATAAGTTACTCTTGCTGTTGTAATTTAGAGTT-CCCTGTTTGATTACTATAAATA.......................................................................................AGAAGAATAGAGTACTCTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E308962" ref_strand="+" ref_description="SGN-E308962 [cLEY-23-E10]">
      <seq>agtgatggtatgcagtcaataaggatgaattattatcccccttgtcctgagccagacagggcaattggcttaagccctcattctgatgcagatgccctcaccatcctcttccagctcaatgaaactgaaggtctccaagtccgaaaagacgatatttgggtgcctataacgcccctcccaaatgctttgattgtcaatattggcgatatgatggagatagtgagcaatggtgtctataggagcattgagcatagagcaattgtaaactcatatgaagaacgtctctctgttgcaacattctacaacatcaaccttgagtccgagttaggacctgcacacagccttattggaccacataatcctcccattttccgaagagttcctgtgcaaaaatatttacaggacttttttgcacgaaaacttgatggaaaatcgtatcttgattccatgaaggtcgacgcgagggatgatgaatcataggtagaatctgatatatgtctgtcttgttgttgtaatttggagttcccctgttttctatttgttagctgtattgacgtgaagcaaatattaatatgtggattgctttagacactatatttttgggttgagaggaatttccatgaatttattttagaggaaaaaaaaaaatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="-" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="43085" stop="41629"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="42785" g_stop="42570" g_length="216"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="216" r_length="216" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="42569" i_stop="42363" i_length="207">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42362" g_stop="41929" g_length="434"/>
          <reference_exon_boundary r_type="cDNA" r_start="217" r_stop="650" r_length="434" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="-" ref_id="SGN-E308962" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>650</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E308962" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="42785" e_stop="42570"/>
          <exon e_start="42362" e_stop="41929"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTGATGGTATGCAGTCAATAAGGATGAATTATTATCCCCCTTGTCCTGAGCCAGACAGGGCAATTGGCTTAAGCCCTCATTCTGATGCAGATGCCCTCACCATCCTCTTCCAGCTCAATGAAACTGAAGGTCTCCAAGTCCGAAAAGACGATATTTGGGTGCCTATAACGCCCCTCCCAAATGCTTTGATTGTCAATATTGGCGATATGATGGAGGTAAATAACAAACCTTTTACTGAGTAATTTATTTCTCAAAGGGTAGGCGTTAGCCACATATGATAATTGTAGTTTTTGTGTTGCAAGTTATCGTTTTAGTTTGGTTTTGATTCACAGTATCATGCATCATGGTTCACGTGTTTAACACTTCTGAATTTTCATGAAAGTACTTAATTGACGAAAAATGTGTTTATTTGACTTTGGCAGATAGTGAGCAATGGTGTCTATAGGAGCATTGAGCATAGAGCAATTGTAAACTCATATGAAGAACGTCTCTCTGTTGCAACATTCTACAACATCAACCTTGAGTCCGAGTTAGGACCTGCACACAGCCTTATTGGACCACATAATCCTCCCATTTTCCGAAGAGTTCCTGTGCAAAAATATTTACAGGACTTTTTTGCACGAAAACTTGATGGAAAATCGTATCTTGATTCCATGAAGGTCGACGCGAGGGATGATGAATCATAGGTAGAATCTGATATATGTCTGTCTTGTTGTTGTAATTTGGAGTTCCCCTGTTTTCTATTTGTTAGCTGTATTGACGTGAAGCAAATATTAATATGTGGATTGCTTTAGACACTATATTTTTGGGTTGAGAGGAATTTCCATGAATTTATTTTAGAGGAAAATACACGACT</genome_strand>
        <mrna_strand>AGTGATGGTATGCAGTCAATAAGGATGAATTATTATCCCCCTTGTCCTGAGCCAGACAGGGCAATTGGCTTAAGCCCTCATTCTGATGCAGATGCCCTCACCATCCTCTTCCAGCTCAATGAAACTGAAGGTCTCCAAGTCCGAAAAGACGATATTTGGGTGCCTATAACGCCCCTCCCAAATGCTTTGATTGTCAATATTGGCGATATGATGGAG...............................................................................................................................................................................................................ATAGTGAGCAATGGTGTCTATAGGAGCATTGAGCATAGAGCAATTGTAAACTCATATGAAGAACGTCTCTCTGTTGCAACATTCTACAACATCAACCTTGAGTCCGAGTTAGGACCTGCACACAGCCTTATTGGACCACATAATCCTCCCATTTTCCGAAGAGTTCCTGTGCAAAAATATTTACAGGACTTTTTTGCACGAAAACTTGATGGAAAATCGTATCTTGATTCCATGAAGGTCGACGCGAGGGATGATGAATCATAGGTAGAATCTGATATATGTCTGTCTTGTTGTTGTAATTTGGAGTTCCCCTGTTTTCTATTTGTTAGCTGTATTGACGTGAAGCAAATATTAATATGTGGATTGCTTTAGACACTATATTTTTGGGTTGAGAGGAATTTCCATGAATTTATTTTAGAGGAAAAAAAAAAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E296135" ref_strand="+" ref_description="SGN-E296135 [cLET-24-N1]">
      <seq>aagcttgattggagtgacatgtttggcataataaatcttcctcctcatatgcgcaaagtggacttgtttcagaagttgccctcgaagctcagagacatcatggaagcatattccaaagaaatcaagaacctaacaatgatcatcgtatgtcaattggccaaggctttaaggatggatgaaaaagaaatgcgagatctattcagtgatggtatgcagtcaataaggatgaattattatcccccttgtcctgagccagacagggcaattggcttaagccctcattctgatgcagatgccctcaccatcctcttccagctcaatgaaactgaaggtctccaagtccgaaaagacgatatttgggtgcctataacgcccctcccaaatgctttgattgtcaatattggcgatatgatggagatagtgagcaatggtgtctataggagcattgagcatagagcaattgtaaactcatatgaagaacgtctctctgttgcaacattctacaacatcaaccttgagtccgagttaggacctgcacacagccttattggaccacataatcctcccattttccgaagagttcctgtgcaaaaatatttacaggacttttttgcacgaaaacttgatggaaaatcgtatcttgattccatgaaggtcgacgcgagggatgatgaatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="-" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="43546" stop="41803"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43246" g_stop="43155" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="92" r_length="92" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="43154" i_stop="42895" i_length="260">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42894" g_stop="42570" g_length="325"/>
          <reference_exon_boundary r_type="cDNA" r_start="93" r_stop="417" r_length="325" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42569" i_stop="42363" i_length="207">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="42362" g_stop="42103" g_length="260"/>
          <reference_exon_boundary r_type="cDNA" r_start="418" r_stop="677" r_length="260" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="-" ref_id="SGN-E296135" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>677</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E296135" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="43246" e_stop="43155"/>
          <exon e_start="42894" e_stop="42570"/>
          <exon e_start="42362" e_stop="42103"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGCTTGATTGGAGTGACATGTTTGGCATAATAAATCTTCCTCCTCATATCCGCAAAGTGGACTTGTTTCAGAAGTTGCCCTCGAAGCTCAGGTGGCCATCTCCTTACTCTCTCTCAGCACATGCTTACTCGACGCCCTTACTTGTCTTTCTTTTGTATAAGAAAAGTCAAGAAATCGACTTTGTTCAGTTATCTCTACTAGTTTATGAACTATTTAAGCAGTAAACTACTCTATCCAACGGTATCAACCAATTCTTGAAATTTAAATTCGTCCCACAGACCATTTTGTCTAATGTGTGCCTTGATCTTCGCTCTCCTCATCTCTTAATATGTTTGTGTGTTTGAAATGCAGAGACATCATGGAAGCATATTCCAAAGAAATCAAGAACCTAACAATGATCATCGTATGTCAATTGGCCAAGGCTTTAAGGATGGATGAAAAAGAAATGCGAGATCTATTCAGTGATGGTATGCAGTCAATAAGGATGAATTATTATCCCCCTTGTCCTGAGCCAGACAGGGCAATTGGCTTAAGCCCTCATTCTGATGCAGATGCCCTCACCATCCTCTTCCAGCTCAATGAAACTGAAGGTCTCCAAGTCCGAAAAGACGATATTTGGGTGCCTATAACGCCCCTCCCAAATGCTTTGATTGTCAATATTGGCGATATGATGGAGGTAAATAACAAACCTTTTACTGAGTAATTTATTTCTCAAAGGGTAGGCGTTAGCCACATATGATAATTGTAGTTTTTGTGTTGCAAGTTATCGTTTTAGTTTGGTTTTGATTCACAGTATCATGCATCATGGTTCACGTGTTTAACACTTCTGAATTTTCATGAAAGTACTTAATTGACGAAAAATGTGTTTATTTGACTTTGGCAGATAGTGAGCAATGGTGTCTATAGGAGCATTGAGCATAGAGCAATTGTAAACTCATATGAAGAACGTCTCTCTGTTGCAACATTCTACAACATCAACCTTGAGTCCGAGTTAGGACCTGCACACAGCCTTATTGGACCACATAATCCTCCCATTTTCCGAAGAGTTCCTGTGCAAAAATATTTACAGGACTTTTTTGCACGAAAACTTGATGGAAAATCGTATCTTGATTCCATGAAGGTCGACGCGAGGGATGATGAATC</genome_strand>
        <mrna_strand>AAGCTTGATTGGAGTGACATGTTTGGCATAATAAATCTTCCTCCTCATATGCGCAAAGTGGACTTGTTTCAGAAGTTGCCCTCGAAGCTCAG....................................................................................................................................................................................................................................................................AGACATCATGGAAGCATATTCCAAAGAAATCAAGAACCTAACAATGATCATCGTATGTCAATTGGCCAAGGCTTTAAGGATGGATGAAAAAGAAATGCGAGATCTATTCAGTGATGGTATGCAGTCAATAAGGATGAATTATTATCCCCCTTGTCCTGAGCCAGACAGGGCAATTGGCTTAAGCCCTCATTCTGATGCAGATGCCCTCACCATCCTCTTCCAGCTCAATGAAACTGAAGGTCTCCAAGTCCGAAAAGACGATATTTGGGTGCCTATAACGCCCCTCCCAAATGCTTTGATTGTCAATATTGGCGATATGATGGAG...............................................................................................................................................................................................................ATAGTGAGCAATGGTGTCTATAGGAGCATTGAGCATAGAGCAATTGTAAACTCATATGAAGAACGTCTCTCTGTTGCAACATTCTACAACATCAACCTTGAGTCCGAGTTAGGACCTGCACACAGCCTTATTGGACCACATAATCCTCCCATTTTCCGAAGAGTTCCTGTGCAAAAATATTTACAGGACTTTTTTGCACGAAAACTTGATGGAAAATCGTATCTTGATTCCATGAAGGTCGACGCGAGGGATGATGAATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E290167" ref_strand="+" ref_description="SGN-E290167 [cLET-5-E15]">
      <seq>aagcttgattggagtgacatgtttggcataataaatcttcctcctcatatccgcaaagtggacttgtttcagaagttgccctcgaagctcagagacatcatggaagcatattccaaagaaatcaagaacctaacaatgatcatcgtatgtcaattggccaaggctttaaggatggatgaaaaagaaatgcgagatctattcagtgatggtatgcagtcaataaggatgaattattatcccccttgtcctgagccagacagggcaattggcttaagccctcattctgatgcagatgccctcaccatcctcttccagctcaatgaaactgaaggtctccaagtccgaaaagacgatatttgggtgcctataacgcccctcccaaatgctttgattgtcaatattggcgatatgatggagatagtgagcaatggtgtctataggagcattgagcatagagcaattgtaaactcatatgaagaacgtctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="-" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="43546" stop="41994"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43246" g_stop="43155" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="92" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="43154" i_stop="42895" i_length="260">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42894" g_stop="42570" g_length="325"/>
          <reference_exon_boundary r_type="cDNA" r_start="93" r_stop="417" r_length="325" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42569" i_stop="42363" i_length="207">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="42362" g_stop="42294" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="418" r_stop="486" r_length="69" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="-" ref_id="SGN-E290167" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>486</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E290167" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="43246" e_stop="43155"/>
          <exon e_start="42894" e_stop="42570"/>
          <exon e_start="42362" e_stop="42294"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGCTTGATTGGAGTGACATGTTTGGCATAATAAATCTTCCTCCTCATATCCGCAAAGTGGACTTGTTTCAGAAGTTGCCCTCGAAGCTCAGGTGGCCATCTCCTTACTCTCTCTCAGCACATGCTTACTCGACGCCCTTACTTGTCTTTCTTTTGTATAAGAAAAGTCAAGAAATCGACTTTGTTCAGTTATCTCTACTAGTTTATGAACTATTTAAGCAGTAAACTACTCTATCCAACGGTATCAACCAATTCTTGAAATTTAAATTCGTCCCACAGACCATTTTGTCTAATGTGTGCCTTGATCTTCGCTCTCCTCATCTCTTAATATGTTTGTGTGTTTGAAATGCAGAGACATCATGGAAGCATATTCCAAAGAAATCAAGAACCTAACAATGATCATCGTATGTCAATTGGCCAAGGCTTTAAGGATGGATGAAAAAGAAATGCGAGATCTATTCAGTGATGGTATGCAGTCAATAAGGATGAATTATTATCCCCCTTGTCCTGAGCCAGACAGGGCAATTGGCTTAAGCCCTCATTCTGATGCAGATGCCCTCACCATCCTCTTCCAGCTCAATGAAACTGAAGGTCTCCAAGTCCGAAAAGACGATATTTGGGTGCCTATAACGCCCCTCCCAAATGCTTTGATTGTCAATATTGGCGATATGATGGAGGTAAATAACAAACCTTTTACTGAGTAATTTATTTCTCAAAGGGTAGGCGTTAGCCACATATGATAATTGTAGTTTTTGTGTTGCAAGTTATCGTTTTAGTTTGGTTTTGATTCACAGTATCATGCATCATGGTTCACGTGTTTAACACTTCTGAATTTTCATGAAAGTACTTAATTGACGAAAAATGTGTTTATTTGACTTTGGCAGATAGTGAGCAATGGTGTCTATAGGAGCATTGAGCATAGAGCAATTGTAAACTCATATGAAGAACGTCTC</genome_strand>
        <mrna_strand>AAGCTTGATTGGAGTGACATGTTTGGCATAATAAATCTTCCTCCTCATATCCGCAAAGTGGACTTGTTTCAGAAGTTGCCCTCGAAGCTCAG....................................................................................................................................................................................................................................................................AGACATCATGGAAGCATATTCCAAAGAAATCAAGAACCTAACAATGATCATCGTATGTCAATTGGCCAAGGCTTTAAGGATGGATGAAAAAGAAATGCGAGATCTATTCAGTGATGGTATGCAGTCAATAAGGATGAATTATTATCCCCCTTGTCCTGAGCCAGACAGGGCAATTGGCTTAAGCCCTCATTCTGATGCAGATGCCCTCACCATCCTCTTCCAGCTCAATGAAACTGAAGGTCTCCAAGTCCGAAAAGACGATATTTGGGTGCCTATAACGCCCCTCCCAAATGCTTTGATTGTCAATATTGGCGATATGATGGAG...............................................................................................................................................................................................................ATAGTGAGCAATGGTGTCTATAGGAGCATTGAGCATAGAGCAATTGTAAACTCATATGAAGAACGTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E434307" ref_strand="+" ref_description="SGN-E434307 [STM-59-B14]">
      <seq>gttagttccaagtgttcaagagcttgccaaacagcacctaaccaattttccggccaggtatgtccgctcagaacaagaatctccagtcatattagccggagcgtcggttccagttatcgatcttcaaaagttgttttcaggggattccatggattctgagctacaaaagcttcactctgcttgccaacaatgggtttcctccaggttataaaccatggagtgacaccttcattgttggaggagttcaagagagaggttgtagaattgtttggacttccaatggaagaaaagaagaaactatggcaacaggaagacagttttgaaggttttgggaatgcattcgttgtatcggaggagcagaagcttgattggtgtgacatgtttggcataataactcttcctcctcgtatccgcaaagtggacttgtttcagaagttgccctcaaagatcaggggcatcatggaagcatactccaaagaaatcaagagcctagctacgatcatcgtatgtcaattggccaaggctttaaggatggatngaaaagaaatgcgagatatattcaatgatggtatgcagtcaatgaggatgaattattatccaccttgccctgagccagacagggccattggctttagccctcattcttgatgctgatgccctcaccatccttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="-" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="48153" stop="32530"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43726" g_stop="43522" g_length="205"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="204" r_length="204" r_score="0.902"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="43521" i_stop="43403" i_length="119">
            <donor d_prob="0.977" d_score="0.94"/>
            <acceptor a_prob="0.993" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="43402" g_stop="43155" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="205" r_stop="452" r_length="248" r_score="0.899"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="43154" i_stop="42895" i_length="260">
            <donor d_prob="0.000" d_score="0.94"/>
            <acceptor a_prob="0.999" a_score="0.86"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="42894" g_stop="42677" g_length="218"/>
          <reference_exon_boundary r_type="cDNA" r_start="453" r_stop="671" r_length="219" r_score="0.908"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="-" ref_id="SGN-E434307" ref_strand="+">
        <total_alignment_score>0.903</total_alignment_score>
        <cumulative_length_of_scored_exons>671</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E434307" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="43726" e_stop="43522"/>
          <exon e_start="43402" e_stop="43155"/>
          <exon e_start="42894" e_stop="42677"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTAGTACCAAGTGTTCAAGAGCTTGCCAAACAGCACCTAACCAATATTCCGGACAGGTATGTCCGCCCACAACAAGAATCTCTGGTCGTATCTTCCGGAGCATCAGTTCCAGTTATCGATCTTCAAAAGTTGATTTCAGGGAATACCATAGATTCTGAGCTACAAAAGCTTCACTCTGCTTGCCAAGAATGGGGTTTCCTACAGGTTTCAATTTCTTCGGAATTTTGTTCAATTATTTCGTTGTGTTTGTTACGAATGCATTTTATTTGAATTGAAAATGACTTATTGGTTGAGAAATTAACTCACATATTGTTGAATGTTAGGTTGTAAACCATGGAGTGACACCTTCGTTACTGGAGGACTTCAAGAGAGAGGTTATTCAATTGTTCAAACTTCCAATGGAAGAAAAGAAGAAACTGTGGCAACAGAAAGACAGCTTTGAAGGTTTCGGGCATATGTTTGTTGTATCGGAGGAGCAGAAGCTTGATTGGAGTGACATGTTTGGCATAATAAATCTTCCTCCTCATATCCGCAAAGTGGACTTGTTTCAGAAGTTGCCCTCGAAGCTCAGGTGGCCATCTCCTTACTCTCTCTCAGCACATGCTTACTCGACGCCCTTACTTGTCTTTCTTTTGTATAAGAAAAGTCAAGAAATCGACTTTGTTCAGTTATCTCTACTAGTTTATGAACTATTTAAGCAGTAAACTACTCTATCCAACGGTATCAACCAATTCTTGAAATTTAAATTCGTCCCACAGACCATTTTGTCTAATGTGTGCCTTGATCTTCGCTCTCCTCATCTCTTAATATGTTTGTGTGTTTGAAATGCAGAGACATCATGGAAGCATATTCCAAAGAAATCAAGAACCTAACAATGATCATCGTATGTCAATTGGCCAAGGCTTTAAGGATGGATGAAAAAGAAATGCGAGATCTATTCAGTGATGGTATGCAGTCAATAAGGATGAATTATTATCCCCCTTGTCCTGAGCCAGACAGGGCAATTGGCTTAAGCCCTCATTC-TGATGCAGATGCCCTCACCATCCTCT</genome_strand>
        <mrna_strand>GTTAGTTCCAAGTGTTCAAGAGCTTGCCAAACAGCACCTAACCAATTTTCCGGCCAGGTATGTCCGCTCAGAACAAGAATCTCCAGTCATATTAGCCGGAGCGTCGGTTCCAGTTATCGATCTTCAAAAGTTGTTTTCAGGGGATTCCATGGATTCTGAGCTACAAAAGCTTCACTCTGCTTGCCAACAAT-GGGTTTCCTCCAG.......................................................................................................................GTTATAAACCATGGAGTGACACCTTCATTGTTGGAGGAGTTCAAGAGAGAGGTTGTAGAATTGTTTGGACTTCCAATGGAAGAAAAGAAGAAACTATGGCAACAGGAAGACAGTTTTGAAGGTTTTGGGAATGCATTCGTTGTATCGGAGGAGCAGAAGCTTGATTGGTGTGACATGTTTGGCATAATAACTCTTCCTCCTCGTATCCGCAAAGTGGACTTGTTTCAGAAGTTGCCCTCAAAGATCAG....................................................................................................................................................................................................................................................................GGGCATCATGGAAGCATACTCCAAAGAAATCAAGAGCCTAGCTACGATCATCGTATGTCAATTGGCCAAGGCTTTAAGGATGGATNGAAAAGAAATGCGAGATATATTCAATGATGGTATGCAGTCAATGAGGATGAATTATTATCCACCTTGCCCTGAGCCAGACAGGGCCATTGGCTTTAGCCCTCATTCTTGATGCTGATGCCCTCACCATCCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E267646" ref_strand="+" ref_description="SGN-E267646 [cLEI-8-N14]">
      <seq>ttcaagtttgcaagaagagcaaatggagtcaacgccggaaaaattgaactttggaaattctctgttagtaccaagtgttcaagagcttgccaaacagcacctaaccaatattccggacaggtatgtccgcccacaacaagaatctctggtcgtatcttccggagcatcagttccagttatcgatcttcaaaagttgatttcagggaataccatagattctgagctacaaaagcttcactctgcttgccaagaatggggtttcctacaggttgtaaaccatggagtgacaccttcgttactggaggacttcaagagagaggttattcaattgttcaaacttccaatggaagaaaagaagaaactgtggcaacagaaagacagctttgaaggtttcgggcatatgtttgttgtatcggaggagcagaagcttgattggagtgacatgtttggcataataaatcttcctcctcatatccgcaaagtggacttgtttcagaagttgccctcgaagctcagagacatcatggaagcatattccaaagaaatcaagaacctaacaatgatcatcgtatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="-" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="44089" stop="42537"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43789" g_stop="43522" g_length="268"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="268" r_length="268" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="43521" i_stop="43403" i_length="119">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="43402" g_stop="43155" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="269" r_stop="516" r_length="248" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="43154" i_stop="42895" i_length="260">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="42894" g_stop="42837" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="517" r_stop="574" r_length="58" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="-" ref_id="SGN-E267646" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>574</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E267646" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="43789" e_stop="43522"/>
          <exon e_start="43402" e_stop="43155"/>
          <exon e_start="42894" e_stop="42837"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCAAGTTTGCAAGAAGAGCAAATGGAGTCAACGCCGGAAAAATTGAACTTTGGAAATTCTCTGTTAGTACCAAGTGTTCAAGAGCTTGCCAAACAGCACCTAACCAATATTCCGGACAGGTATGTCCGCCCACAACAAGAATCTCTGGTCGTATCTTCCGGAGCATCAGTTCCAGTTATCGATCTTCAAAAGTTGATTTCAGGGAATACCATAGATTCTGAGCTACAAAAGCTTCACTCTGCTTGCCAAGAATGGGGTTTCCTACAGGTTTCAATTTCTTCGGAATTTTGTTCAATTATTTCGTTGTGTTTGTTACGAATGCATTTTATTTGAATTGAAAATGACTTATTGGTTGAGAAATTAACTCACATATTGTTGAATGTTAGGTTGTAAACCATGGAGTGACACCTTCGTTACTGGAGGACTTCAAGAGAGAGGTTATTCAATTGTTCAAACTTCCAATGGAAGAAAAGAAGAAACTGTGGCAACAGAAAGACAGCTTTGAAGGTTTCGGGCATATGTTTGTTGTATCGGAGGAGCAGAAGCTTGATTGGAGTGACATGTTTGGCATAATAAATCTTCCTCCTCATATCCGCAAAGTGGACTTGTTTCAGAAGTTGCCCTCGAAGCTCAGGTGGCCATCTCCTTACTCTCTCTCAGCACATGCTTACTCGACGCCCTTACTTGTCTTTCTTTTGTATAAGAAAAGTCAAGAAATCGACTTTGTTCAGTTATCTCTACTAGTTTATGAACTATTTAAGCAGTAAACTACTCTATCCAACGGTATCAACCAATTCTTGAAATTTAAATTCGTCCCACAGACCATTTTGTCTAATGTGTGCCTTGATCTTCGCTCTCCTCATCTCTTAATATGTTTGTGTGTTTGAAATGCAGAGACATCATGGAAGCATATTCCAAAGAAATCAAGAACCTAACAATGATCATCGTATGT</genome_strand>
        <mrna_strand>TTCAAGTTTGCAAGAAGAGCAAATGGAGTCAACGCCGGAAAAATTGAACTTTGGAAATTCTCTGTTAGTACCAAGTGTTCAAGAGCTTGCCAAACAGCACCTAACCAATATTCCGGACAGGTATGTCCGCCCACAACAAGAATCTCTGGTCGTATCTTCCGGAGCATCAGTTCCAGTTATCGATCTTCAAAAGTTGATTTCAGGGAATACCATAGATTCTGAGCTACAAAAGCTTCACTCTGCTTGCCAAGAATGGGGTTTCCTACAG.......................................................................................................................GTTGTAAACCATGGAGTGACACCTTCGTTACTGGAGGACTTCAAGAGAGAGGTTATTCAATTGTTCAAACTTCCAATGGAAGAAAAGAAGAAACTGTGGCAACAGAAAGACAGCTTTGAAGGTTTCGGGCATATGTTTGTTGTATCGGAGGAGCAGAAGCTTGATTGGAGTGACATGTTTGGCATAATAAATCTTCCTCCTCATATCCGCAAAGTGGACTTGTTTCAGAAGTTGCCCTCGAAGCTCAG....................................................................................................................................................................................................................................................................AGACATCATGGAAGCATATTCCAAAGAAATCAAGAACCTAACAATGATCATCGTATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E395443" ref_strand="+" ref_description="SGN-E395443 [TUS-16-K20]">
      <seq>attctctgttagtaccaagtgttcaagagcttgccaaacagcacctaaccaatattccggacaggtatgtccgcccacaacaagaatctctggtcgtatcttccggagcatcagttccagttatcgatcttcaaaagttgatttcagggaataccatagattctgagctacaaaagcttcactctgcttgccaagaatggggtttcctacaggttgtaaaccatggagtgacaccttcgttactggaggacttcaagagagaggttattcaattgttcaaacttccaatggaagaaaagaagaaactgtggcaacagaaagacagctttgaaggtttcgggcatatgtttgttgtatcggaggagcagaagcttgattggagtgacatgtttggcataataaatcttcctcctcatatccgcaaagtggacttgtttcagaagttgccctcgaagctcaggtggccatctccttactctctctcagcacatgcttactcgacgcccttacttgtctttcttttgtataagaaaagtcaagaaatcgactttgttcagttatctctactagtttatgaactatttaagcagtaaactactctatccaacggtatcaaccatttcttgatatttaaattcgtcccacagaccattttgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="-" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="44033" stop="42658"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43733" g_stop="43522" g_length="212"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="212" r_length="212" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="43521" i_stop="43403" i_length="119">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="43402" g_stop="42958" g_length="445"/>
          <reference_exon_boundary r_type="cDNA" r_start="213" r_stop="657" r_length="445" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="-" ref_id="SGN-E395443" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>657</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E395443" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="43733" e_stop="43522"/>
          <exon e_start="43402" e_stop="42958"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTCTCTGTTAGTACCAAGTGTTCAAGAGCTTGCCAAACAGCACCTAACCAATATTCCGGACAGGTATGTCCGCCCACAACAAGAATCTCTGGTCGTATCTTCCGGAGCATCAGTTCCAGTTATCGATCTTCAAAAGTTGATTTCAGGGAATACCATAGATTCTGAGCTACAAAAGCTTCACTCTGCTTGCCAAGAATGGGGTTTCCTACAGGTTTCAATTTCTTCGGAATTTTGTTCAATTATTTCGTTGTGTTTGTTACGAATGCATTTTATTTGAATTGAAAATGACTTATTGGTTGAGAAATTAACTCACATATTGTTGAATGTTAGGTTGTAAACCATGGAGTGACACCTTCGTTACTGGAGGACTTCAAGAGAGAGGTTATTCAATTGTTCAAACTTCCAATGGAAGAAAAGAAGAAACTGTGGCAACAGAAAGACAGCTTTGAAGGTTTCGGGCATATGTTTGTTGTATCGGAGGAGCAGAAGCTTGATTGGAGTGACATGTTTGGCATAATAAATCTTCCTCCTCATATCCGCAAAGTGGACTTGTTTCAGAAGTTGCCCTCGAAGCTCAGGTGGCCATCTCCTTACTCTCTCTCAGCACATGCTTACTCGACGCCCTTACTTGTCTTTCTTTTGTATAAGAAAAGTCAAGAAATCGACTTTGTTCAGTTATCTCTACTAGTTTATGAACTATTTAAGCAGTAAACTACTCTATCCAACGGTATCAACCAATTCTTGAAATTTAAATTCGTCCCACAGACCATTTTGT</genome_strand>
        <mrna_strand>ATTCTCTGTTAGTACCAAGTGTTCAAGAGCTTGCCAAACAGCACCTAACCAATATTCCGGACAGGTATGTCCGCCCACAACAAGAATCTCTGGTCGTATCTTCCGGAGCATCAGTTCCAGTTATCGATCTTCAAAAGTTGATTTCAGGGAATACCATAGATTCTGAGCTACAAAAGCTTCACTCTGCTTGCCAAGAATGGGGTTTCCTACAG.......................................................................................................................GTTGTAAACCATGGAGTGACACCTTCGTTACTGGAGGACTTCAAGAGAGAGGTTATTCAATTGTTCAAACTTCCAATGGAAGAAAAGAAGAAACTGTGGCAACAGAAAGACAGCTTTGAAGGTTTCGGGCATATGTTTGTTGTATCGGAGGAGCAGAAGCTTGATTGGAGTGACATGTTTGGCATAATAAATCTTCCTCCTCATATCCGCAAAGTGGACTTGTTTCAGAAGTTGCCCTCGAAGCTCAGGTGGCCATCTCCTTACTCTCTCTCAGCACATGCTTACTCGACGCCCTTACTTGTCTTTCTTTTGTATAAGAAAAGTCAAGAAATCGACTTTGTTCAGTTATCTCTACTAGTTTATGAACTATTTAAGCAGTAAACTACTCTATCCAACGGTATCAACCATTTCTTGATATTTAAATTCGTCCCACAGACCATTTTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E204474" ref_strand="+" ref_description="SGN-E204474 [cLEC-24-G23]">
      <seq>ttctctgttagtaccaagtgttcaagagcttgccaaacagcacctaaccaatattccggacaggtatgtccgcccacaacaagaatctctggtcgtatcttccggagcatcagttccagttatcgatcttcaaaagttgatttcacggaataccatagattctgagctacaaaagcttcactctgcttgccaagaatggggtttcctacaggttgtaaaccatggagtgacaccttcgttactggaggacttcaagagagaggttattcaattgttcaaacttccaatggaagaaaagaagaaactgtggcaacagaaagacagctttgaaggtttcgggcatatgtttgttgtatcggaggagcagaagcttgattggagtgacatgtttggcataataaatcttcctcctcatatccgcaaagtggac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="-" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="44032" stop="42884"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43732" g_stop="43522" g_length="211"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="211" r_length="211" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="43521" i_stop="43403" i_length="119">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="43402" g_stop="43184" g_length="219"/>
          <reference_exon_boundary r_type="cDNA" r_start="212" r_stop="430" r_length="219" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="-" ref_id="SGN-E204474" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>430</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E204474" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="43732" e_stop="43522"/>
          <exon e_start="43402" e_stop="43184"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTCTGTTAGTACCAAGTGTTCAAGAGCTTGCCAAACAGCACCTAACCAATATTCCGGACAGGTATGTCCGCCCACAACAAGAATCTCTGGTCGTATCTTCCGGAGCATCAGTTCCAGTTATCGATCTTCAAAAGTTGATTTCAGGGAATACCATAGATTCTGAGCTACAAAAGCTTCACTCTGCTTGCCAAGAATGGGGTTTCCTACAGGTTTCAATTTCTTCGGAATTTTGTTCAATTATTTCGTTGTGTTTGTTACGAATGCATTTTATTTGAATTGAAAATGACTTATTGGTTGAGAAATTAACTCACATATTGTTGAATGTTAGGTTGTAAACCATGGAGTGACACCTTCGTTACTGGAGGACTTCAAGAGAGAGGTTATTCAATTGTTCAAACTTCCAATGGAAGAAAAGAAGAAACTGTGGCAACAGAAAGACAGCTTTGAAGGTTTCGGGCATATGTTTGTTGTATCGGAGGAGCAGAAGCTTGATTGGAGTGACATGTTTGGCATAATAAATCTTCCTCCTCATATCCGCAAAGTGGAC</genome_strand>
        <mrna_strand>TTCTCTGTTAGTACCAAGTGTTCAAGAGCTTGCCAAACAGCACCTAACCAATATTCCGGACAGGTATGTCCGCCCACAACAAGAATCTCTGGTCGTATCTTCCGGAGCATCAGTTCCAGTTATCGATCTTCAAAAGTTGATTTCACGGAATACCATAGATTCTGAGCTACAAAAGCTTCACTCTGCTTGCCAAGAATGGGGTTTCCTACAG.......................................................................................................................GTTGTAAACCATGGAGTGACACCTTCGTTACTGGAGGACTTCAAGAGAGAGGTTATTCAATTGTTCAAACTTCCAATGGAAGAAAAGAAGAAACTGTGGCAACAGAAAGACAGCTTTGAAGGTTTCGGGCATATGTTTGTTGTATCGGAGGAGCAGAAGCTTGATTGGAGTGACATGTTTGGCATAATAAATCTTCCTCCTCATATCCGCAAAGTGGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E277411" ref_strand="+" ref_description="SGN-E277411 [cLER-3-B23]">
      <seq>tttcaagtttgcaagaagagcaaatggagtcaacgccggaaaaattgaactttggaaattctctgttagtaccaagtgttcaagagcttgccaaacagcacctaaccaatattccggacaggtatgtccgcccacaacaagaatctctggtcgtatcttccggagcatcagttccagttatcgatcttcaaaagttgatttcagggaataccatagattctgagctacaaaagcttcactctgcttgccaagaatggggtttcctacaggttgtaaaccatggagtgacaccttcgttactggaggacttcaagagagaggttattcaattgttcaaacttccaatggaagaaaagaagaaactgtggcaacagaaagacagctttgaaggtttcgggcatatgtttgttgtatcggaggagcagaagcttgattggagtgacatgtttggcataataa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="-" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="44090" stop="42913"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43790" g_stop="43522" g_length="269"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="269" r_length="269" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="43521" i_stop="43403" i_length="119">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="43402" g_stop="43213" g_length="190"/>
          <reference_exon_boundary r_type="cDNA" r_start="270" r_stop="459" r_length="190" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="-" ref_id="SGN-E277411" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>459</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E277411" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="43790" e_stop="43522"/>
          <exon e_start="43402" e_stop="43213"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCAAGTTTGCAAGAAGAGCAAATGGAGTCAACGCCGGAAAAATTGAACTTTGGAAATTCTCTGTTAGTACCAAGTGTTCAAGAGCTTGCCAAACAGCACCTAACCAATATTCCGGACAGGTATGTCCGCCCACAACAAGAATCTCTGGTCGTATCTTCCGGAGCATCAGTTCCAGTTATCGATCTTCAAAAGTTGATTTCAGGGAATACCATAGATTCTGAGCTACAAAAGCTTCACTCTGCTTGCCAAGAATGGGGTTTCCTACAGGTTTCAATTTCTTCGGAATTTTGTTCAATTATTTCGTTGTGTTTGTTACGAATGCATTTTATTTGAATTGAAAATGACTTATTGGTTGAGAAATTAACTCACATATTGTTGAATGTTAGGTTGTAAACCATGGAGTGACACCTTCGTTACTGGAGGACTTCAAGAGAGAGGTTATTCAATTGTTCAAACTTCCAATGGAAGAAAAGAAGAAACTGTGGCAACAGAAAGACAGCTTTGAAGGTTTCGGGCATATGTTTGTTGTATCGGAGGAGCAGAAGCTTGATTGGAGTGACATGTTTGGCATAATAA</genome_strand>
        <mrna_strand>TTTCAAGTTTGCAAGAAGAGCAAATGGAGTCAACGCCGGAAAAATTGAACTTTGGAAATTCTCTGTTAGTACCAAGTGTTCAAGAGCTTGCCAAACAGCACCTAACCAATATTCCGGACAGGTATGTCCGCCCACAACAAGAATCTCTGGTCGTATCTTCCGGAGCATCAGTTCCAGTTATCGATCTTCAAAAGTTGATTTCAGGGAATACCATAGATTCTGAGCTACAAAAGCTTCACTCTGCTTGCCAAGAATGGGGTTTCCTACAG.......................................................................................................................GTTGTAAACCATGGAGTGACACCTTCGTTACTGGAGGACTTCAAGAGAGAGGTTATTCAATTGTTCAAACTTCCAATGGAAGAAAAGAAGAAACTGTGGCAACAGAAAGACAGCTTTGAAGGTTTCGGGCATATGTTTGTTGTATCGGAGGAGCAGAAGCTTGATTGGAGTGACATGTTTGGCATAATAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E201437" ref_strand="+" ref_description="SGN-E201437 [cLEC-4-A15]">
      <seq>gcaaatggagtcaacgccggaaaaattgaactttggaaattctctgttagtaccaagtgttcaagagcttgccaaacagcacctaaccaatattccggacaggtatgtacgtccacaacaagaatctctggtcgtatcttacggagcattagttacagttatcgatcttcaaaagttgatttcagggaataccatagattctgagctacaaaagcttcactctgcttgccaagaatggggtttcctacaggttgtaaaccatggagtgacaccttcgttactggaggacttcaagagagaggttattcaattgttcaaacttccaatggaagaaaagaagaaactgtggcaacagaaagacagctttgaaggtttcgggcatatgtttgttgtatcggaagagcagaagcttgattggagtgacatgtttggcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="-" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="44071" stop="42918"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43771" g_stop="43522" g_length="250"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="250" r_length="250" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="43521" i_stop="43403" i_length="119">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="43402" g_stop="43218" g_length="185"/>
          <reference_exon_boundary r_type="cDNA" r_start="251" r_stop="435" r_length="185" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="-" ref_id="SGN-E201437" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>435</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E201437" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="43771" e_stop="43522"/>
          <exon e_start="43402" e_stop="43218"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAAATGGAGTCAACGCCGGAAAAATTGAACTTTGGAAATTCTCTGTTAGTACCAAGTGTTCAAGAGCTTGCCAAACAGCACCTAACCAATATTCCGGACAGGTATGTCCGCCCACAACAAGAATCTCTGGTCGTATCTTCCGGAGCATCAGTTCCAGTTATCGATCTTCAAAAGTTGATTTCAGGGAATACCATAGATTCTGAGCTACAAAAGCTTCACTCTGCTTGCCAAGAATGGGGTTTCCTACAGGTTTCAATTTCTTCGGAATTTTGTTCAATTATTTCGTTGTGTTTGTTACGAATGCATTTTATTTGAATTGAAAATGACTTATTGGTTGAGAAATTAACTCACATATTGTTGAATGTTAGGTTGTAAACCATGGAGTGACACCTTCGTTACTGGAGGACTTCAAGAGAGAGGTTATTCAATTGTTCAAACTTCCAATGGAAGAAAAGAAGAAACTGTGGCAACAGAAAGACAGCTTTGAAGGTTTCGGGCATATGTTTGTTGTATCGGAGGAGCAGAAGCTTGATTGGAGTGACATGTTTGGCAT</genome_strand>
        <mrna_strand>GCAAATGGAGTCAACGCCGGAAAAATTGAACTTTGGAAATTCTCTGTTAGTACCAAGTGTTCAAGAGCTTGCCAAACAGCACCTAACCAATATTCCGGACAGGTATGTACGTCCACAACAAGAATCTCTGGTCGTATCTTACGGAGCATTAGTTACAGTTATCGATCTTCAAAAGTTGATTTCAGGGAATACCATAGATTCTGAGCTACAAAAGCTTCACTCTGCTTGCCAAGAATGGGGTTTCCTACAG.......................................................................................................................GTTGTAAACCATGGAGTGACACCTTCGTTACTGGAGGACTTCAAGAGAGAGGTTATTCAATTGTTCAAACTTCCAATGGAAGAAAAGAAGAAACTGTGGCAACAGAAAGACAGCTTTGAAGGTTTCGGGCATATGTTTGTTGTATCGGAAGAGCAGAAGCTTGATTGGAGTGACATGTTTGGCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E303084" ref_strand="+" ref_description="SGN-E303084 [cLEW-26-D10]">
      <seq>ttattttttcaagtttgcaagaagagcaaatggagtcaacgccggaaaaattgaactttggaaattctctgttagtaccaagtgttcaagagcttgccaaacagcacctaaccaatattccggacaggtatgtccgcccacaacaagaatctctggtcgtatcttccggagcatcagttccagttatcgatcttcaaaagttgatttcagggaataccatagattctgagctacaaaagcttcactctgcttgccaagaatggggtttcctacaggttgtaaaccatggagtgacaccttcgttactggaggacttcaagagagaggttattcaattgttcaaacttccaatggaagaaaagaagaaactgtggcaacagaaagacagctttgaaggtttcgggcatatgtttgttgtatcggaggagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="-" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="44096" stop="42949"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43796" g_stop="43522" g_length="275"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="275" r_length="275" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="43521" i_stop="43403" i_length="119">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="43402" g_stop="43249" g_length="154"/>
          <reference_exon_boundary r_type="cDNA" r_start="276" r_stop="429" r_length="154" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="-" ref_id="SGN-E303084" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>429</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E303084" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="43796" e_stop="43522"/>
          <exon e_start="43402" e_stop="43249"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATTTTTTCAAGTTTGCAAGAAGAGCAAATGGAGTCAACGCCGGAAAAATTGAACTTTGGAAATTCTCTGTTAGTACCAAGTGTTCAAGAGCTTGCCAAACAGCACCTAACCAATATTCCGGACAGGTATGTCCGCCCACAACAAGAATCTCTGGTCGTATCTTCCGGAGCATCAGTTCCAGTTATCGATCTTCAAAAGTTGATTTCAGGGAATACCATAGATTCTGAGCTACAAAAGCTTCACTCTGCTTGCCAAGAATGGGGTTTCCTACAGGTTTCAATTTCTTCGGAATTTTGTTCAATTATTTCGTTGTGTTTGTTACGAATGCATTTTATTTGAATTGAAAATGACTTATTGGTTGAGAAATTAACTCACATATTGTTGAATGTTAGGTTGTAAACCATGGAGTGACACCTTCGTTACTGGAGGACTTCAAGAGAGAGGTTATTCAATTGTTCAAACTTCCAATGGAAGAAAAGAAGAAACTGTGGCAACAGAAAGACAGCTTTGAAGGTTTCGGGCATATGTTTGTTGTATCGGAGGAGC</genome_strand>
        <mrna_strand>TTATTTTTTCAAGTTTGCAAGAAGAGCAAATGGAGTCAACGCCGGAAAAATTGAACTTTGGAAATTCTCTGTTAGTACCAAGTGTTCAAGAGCTTGCCAAACAGCACCTAACCAATATTCCGGACAGGTATGTCCGCCCACAACAAGAATCTCTGGTCGTATCTTCCGGAGCATCAGTTCCAGTTATCGATCTTCAAAAGTTGATTTCAGGGAATACCATAGATTCTGAGCTACAAAAGCTTCACTCTGCTTGCCAAGAATGGGGTTTCCTACAG.......................................................................................................................GTTGTAAACCATGGAGTGACACCTTCGTTACTGGAGGACTTCAAGAGAGAGGTTATTCAATTGTTCAAACTTCCAATGGAAGAAAAGAAGAAACTGTGGCAACAGAAAGACAGCTTTGAAGGTTTCGGGCATATGTTTGTTGTATCGGAGGAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E206358" ref_strand="+" ref_description="SGN-E206358 [cLEC-23-H9]">
      <seq>tctgttagtaccaagtgttcaagagcttgccaaacagcacctaaccaatattccggacaggtatgtccgcccacaacaagaatctctggtcgtatcttccggagcatcagttccagttatcgatcttcaaaagttgatttcagggaataccatagattctgagctacaaaagcttcactctgcttgccaagaatggggtttcctacaggttgtaaaccatggagtgacaccttcgttactggaggacttcaagagagagggtattcaattggtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="-" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="44029" stop="43037"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43729" g_stop="43522" g_length="208"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="208" r_length="208" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="43521" i_stop="43403" i_length="119">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="43402" g_stop="43337" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="209" r_stop="274" r_length="66" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="-" ref_id="SGN-E206358" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>274</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E206358" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="43729" e_stop="43522"/>
          <exon e_start="43402" e_stop="43337"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTGTTAGTACCAAGTGTTCAAGAGCTTGCCAAACAGCACCTAACCAATATTCCGGACAGGTATGTCCGCCCACAACAAGAATCTCTGGTCGTATCTTCCGGAGCATCAGTTCCAGTTATCGATCTTCAAAAGTTGATTTCAGGGAATACCATAGATTCTGAGCTACAAAAGCTTCACTCTGCTTGCCAAGAATGGGGTTTCCTACAGGTTTCAATTTCTTCGGAATTTTGTTCAATTATTTCGTTGTGTTTGTTACGAATGCATTTTATTTGAATTGAAAATGACTTATTGGTTGAGAAATTAACTCACATATTGTTGAATGTTAGGTTGTAAACCATGGAGTGACACCTTCGTTACTGGAGGACTTCAAGAGAGAGGTTATTCAATTGTTC</genome_strand>
        <mrna_strand>TCTGTTAGTACCAAGTGTTCAAGAGCTTGCCAAACAGCACCTAACCAATATTCCGGACAGGTATGTCCGCCCACAACAAGAATCTCTGGTCGTATCTTCCGGAGCATCAGTTCCAGTTATCGATCTTCAAAAGTTGATTTCAGGGAATACCATAGATTCTGAGCTACAAAAGCTTCACTCTGCTTGCCAAGAATGGGGTTTCCTACAG.......................................................................................................................GTTGTAAACCATGGAGTGACACCTTCGTTACTGGAGGACTTCAAGAGAGAGGGTATTCAATTGGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E203756" ref_strand="+" ref_description="SGN-E203756 [cLEC-17-K10]">
      <seq>tagcagccattccatcgcgatatattcgtgatgatttagaaaagacatcctgttccatattaatgcctcaagttccagtgattgatatggaaaaactgctgataattggagatcatgataccgcagagcttgagaggcttcattttgcttgcaaagaatggggattttttcaggtggtgaatcatggggtgagttcattgttgttggagaaagtgaagtcagaaatccgagcatttttcgatctaccaatggaagagaagaagaagtttgatcaacaagaacgggacgttgaaggatttggacaagcttttgttttttctcaagagcaaaagttagattggggtgacttgttttacatgaccactctccctactaatttgagaaaacctgatttatttcccaagctccctcactcacttagggagaccatggaagaacataccaaggaatataagaacctagccataacgatcttgtgtcaattggcaaaggttttagggatggatgaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="-" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="53487" stop="52177"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53187" g_stop="53015" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="173" r_length="173" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="53014" i_stop="52934" i_length="81">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52933" g_stop="52686" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="174" r_stop="421" r_length="248" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="52685" i_stop="52566" i_length="120">
            <donor d_prob="0.959" d_score="0.98"/>
            <acceptor a_prob="0.981" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52565" g_stop="52477" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="422" r_stop="510" r_length="89" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="-" ref_id="SGN-E203756" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>510</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E203756" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53187" e_stop="53015"/>
          <exon e_start="52933" e_stop="52686"/>
          <exon e_start="52565" e_stop="52477"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGCAGCCATTCCATCGCGATATATTCGTGATGATTTAGAAAAGACATCCTGTTCCATATTAATGCCTCAAGTTCCAGTGATTGATATGGAAAAACTGCTGATAATTGGAGATCATGATACCGCAGAGCTTGAGAGGCTTCATTTTGCTTGCAAAGAATGGGGATTTTTTCAGGTATATTTATATGATTTTTGTTTAGTTTTTGAGTTGTGTAGAAAAGGTCTAGTACTTAAAATACGCGTTGGTCTATTGTAGGTGGTGAATCATGGGGTGAGTTCATTGTTGTTGGAGAAAGTGAAGTCAGAAATCCGAGCATTTTTCGATCTACCAATGGAAGAGAAGAAGAAGTTTGATCAACAAGAAGGGGACGTTGAAGGATTTGGACAAGCTTTTGTTTTTTCTCAAGAGCAAAAGTTAGATTGGGGTGACTTGTTTTACATGACCACTCTCCCTACTAATTTGAGAAAACCTCATTTATTTCCCAAGCTCCCTCACTCACTTAGGTAAATCGTAAAATTAGACATTATTTGTTACATAGGTTAATCATTCAGATCTAAAAAAATGGACGAACTGGATGGTTTTCATCCGCTATTATAGCTAATATGATTCGAAATATAATGTAGGGAGACCATGGAAGAACATAGCAAGGAATTTAAGAACCTAGCCATAAGGATCTTGTGTCAATTGGCAAAGGTTTTAGGGATGGATGAAA</genome_strand>
        <mrna_strand>TAGCAGCCATTCCATCGCGATATATTCGTGATGATTTAGAAAAGACATCCTGTTCCATATTAATGCCTCAAGTTCCAGTGATTGATATGGAAAAACTGCTGATAATTGGAGATCATGATACCGCAGAGCTTGAGAGGCTTCATTTTGCTTGCAAAGAATGGGGATTTTTTCAG.................................................................................GTGGTGAATCATGGGGTGAGTTCATTGTTGTTGGAGAAAGTGAAGTCAGAAATCCGAGCATTTTTCGATCTACCAATGGAAGAGAAGAAGAAGTTTGATCAACAAGAACGGGACGTTGAAGGATTTGGACAAGCTTTTGTTTTTTCTCAAGAGCAAAAGTTAGATTGGGGTGACTTGTTTTACATGACCACTCTCCCTACTAATTTGAGAAAACCTGATTTATTTCCCAAGCTCCCTCACTCACTTAG........................................................................................................................GGAGACCATGGAAGAACATACCAAGGAATATAAGAACCTAGCCATAACGATCTTGTGTCAATTGGCAAAGGTTTTAGGGATGGATGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E544979" ref_strand="+" ref_description="SGN-E544979 [TUS-67-J12](-)">
      <seq>atctatcaggagtgtcacaagagttgttacaaatgttggaaaagataactcgacttacgttttaggtgtgagttcacctcctggatacgttgttgatattgttccaaagaggttacatttcagcaaattgggagagaaacacagcttcaacataacaattactagtgttcaaaggagaaatgatttttcgtttggttggtacacatggagtgacggagtccatgtagttcgtagtccaattgcagtatcctcagcgtaattaaatcatgcaattgtgaataaatagtacccaaaaataattttactaatgtatatctagagcatgatattatgaagttcccaaacaagacttgtattctatattttctcatataaacaaaaatatcaaaatagtctcaatatcaaataaataaaaatttataaaatcacataataagttattacaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="-" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="58910" stop="57864"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58610" g_stop="58164" g_length="447"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="447" r_length="447" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="-" ref_id="SGN-E544979" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>447</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E544979" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58610" e_stop="58164"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTATCAGGAGTGTCACAAGAGTTGTTACAAATGTTGGAAAAGATAACTCGACTTACGTTTTAGGTGTGAGTTCACCTCCTGGATACGTTGTTGATATTGTTCCAAAGAGGTTACATTTCAGCAAATTGGGAGAGAAACACAGCTTCAACATAACAATTACTAGTGTTCAAAGGAGAAATGATTTTTCGTTTGGTTGGTACACATGGAGTGACGGAGTCCATGTAGTTCGTAGTCCAATTGCAGTATCCTCAGCGTAATTAAATCATGCAATTGTGAATAAATAGTACCCAAAAATAATTTTACTAATGTATATCTAGAGCATGATATTATGAAGTTCCCAAACAAAACTTGTATTCTATATTTTCTCATATAAACAAAAATATCAAAATAGTCTCAATATCAAATAAATAAAAATTTATAAAATCACATAATAAGTTATTACAAA</genome_strand>
        <mrna_strand>ATCTATCAGGAGTGTCACAAGAGTTGTTACAAATGTTGGAAAAGATAACTCGACTTACGTTTTAGGTGTGAGTTCACCTCCTGGATACGTTGTTGATATTGTTCCAAAGAGGTTACATTTCAGCAAATTGGGAGAGAAACACAGCTTCAACATAACAATTACTAGTGTTCAAAGGAGAAATGATTTTTCGTTTGGTTGGTACACATGGAGTGACGGAGTCCATGTAGTTCGTAGTCCAATTGCAGTATCCTCAGCGTAATTAAATCATGCAATTGTGAATAAATAGTACCCAAAAATAATTTTACTAATGTATATCTAGAGCATGATATTATGAAGTTCCCAAACAAGACTTGTATTCTATATTTTCTCATATAAACAAAAATATCAAAATAGTCTCAATATCAAATAAATAAAAATTTATAAAATCACATAATAAGTTATTACAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E544980" ref_strand="+" ref_description="SGN-E544980 [TUS-67-J12]">
      <seq>atctatcaggagtgtcacaagagttgttacaaatgttggaaaagataactcgacttacgttttaggtgtgagttcacctcctggatacgttgttgatattgttccaaagaggttacatttcagcaaattgggagagaaacacagcttcaacataacaattactagtgttcaaaggagaaatgatttttcgtttggttggtacacatggagtgacggagtccatgtagttcgtagtccaattgcagtatcctcagcgtaattaaatcatgcaattgtgaataaatagtacccaaaaataattttactaatgtatatctagagcatgatattatgaagttcccaaacaaaacttgtattctatattttctcatataaacaaaaatatcaaaatagtctcaatatcaaataaataaaaatttataaaatcacataataagttattacaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="-" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="58910" stop="57864"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58610" g_stop="58164" g_length="447"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="447" r_length="447" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="-" ref_id="SGN-E544980" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>447</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E544980" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58610" e_stop="58164"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTATCAGGAGTGTCACAAGAGTTGTTACAAATGTTGGAAAAGATAACTCGACTTACGTTTTAGGTGTGAGTTCACCTCCTGGATACGTTGTTGATATTGTTCCAAAGAGGTTACATTTCAGCAAATTGGGAGAGAAACACAGCTTCAACATAACAATTACTAGTGTTCAAAGGAGAAATGATTTTTCGTTTGGTTGGTACACATGGAGTGACGGAGTCCATGTAGTTCGTAGTCCAATTGCAGTATCCTCAGCGTAATTAAATCATGCAATTGTGAATAAATAGTACCCAAAAATAATTTTACTAATGTATATCTAGAGCATGATATTATGAAGTTCCCAAACAAAACTTGTATTCTATATTTTCTCATATAAACAAAAATATCAAAATAGTCTCAATATCAAATAAATAAAAATTTATAAAATCACATAATAAGTTATTACAAA</genome_strand>
        <mrna_strand>ATCTATCAGGAGTGTCACAAGAGTTGTTACAAATGTTGGAAAAGATAACTCGACTTACGTTTTAGGTGTGAGTTCACCTCCTGGATACGTTGTTGATATTGTTCCAAAGAGGTTACATTTCAGCAAATTGGGAGAGAAACACAGCTTCAACATAACAATTACTAGTGTTCAAAGGAGAAATGATTTTTCGTTTGGTTGGTACACATGGAGTGACGGAGTCCATGTAGTTCGTAGTCCAATTGCAGTATCCTCAGCGTAATTAAATCATGCAATTGTGAATAAATAGTACCCAAAAATAATTTTACTAATGTATATCTAGAGCATGATATTATGAAGTTCCCAAACAAAACTTGTATTCTATATTTTCTCATATAAACAAAAATATCAAAATAGTCTCAATATCAAATAAATAAAAATTTATAAAATCACATAATAAGTTATTACAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E308911" ref_strand="+" ref_description="SGN-E308911 [cLEY-23-F16]">
      <seq>tctatcaggagtgtcacaagagttgttacaaatgttggaaaagataactcgacttacgttttaggtgtgagttcacctcctggatacgttgttgatattgttccaaagaggttacatttcagcaaattgggagagaaacacagcttcaacataacaattactagtgttcaaaggagaaatgatttttcgtttggttggtacacatggagtgacggagtccatgtagttcgtagtccaattgcagtatcctcagcgtaattaaatcatgcaattgtgaataaatagtacccaaaaataattttactaatgtatatctagagcatgatattatgaagttcccaaacaaaacttgtattctatattttctcatataaacaaaaatatcaaaatagtctcaatatcaaataaataaaaatttataaaatcacataataagttattacaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="-" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="58909" stop="57864"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58609" g_stop="58164" g_length="446"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="446" r_length="446" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="-" ref_id="SGN-E308911" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>446</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E308911" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58609" e_stop="58164"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTATCAGGAGTGTCACAAGAGTTGTTACAAATGTTGGAAAAGATAACTCGACTTACGTTTTAGGTGTGAGTTCACCTCCTGGATACGTTGTTGATATTGTTCCAAAGAGGTTACATTTCAGCAAATTGGGAGAGAAACACAGCTTCAACATAACAATTACTAGTGTTCAAAGGAGAAATGATTTTTCGTTTGGTTGGTACACATGGAGTGACGGAGTCCATGTAGTTCGTAGTCCAATTGCAGTATCCTCAGCGTAATTAAATCATGCAATTGTGAATAAATAGTACCCAAAAATAATTTTACTAATGTATATCTAGAGCATGATATTATGAAGTTCCCAAACAAAACTTGTATTCTATATTTTCTCATATAAACAAAAATATCAAAATAGTCTCAATATCAAATAAATAAAAATTTATAAAATCACATAATAAGTTATTACAAA</genome_strand>
        <mrna_strand>TCTATCAGGAGTGTCACAAGAGTTGTTACAAATGTTGGAAAAGATAACTCGACTTACGTTTTAGGTGTGAGTTCACCTCCTGGATACGTTGTTGATATTGTTCCAAAGAGGTTACATTTCAGCAAATTGGGAGAGAAACACAGCTTCAACATAACAATTACTAGTGTTCAAAGGAGAAATGATTTTTCGTTTGGTTGGTACACATGGAGTGACGGAGTCCATGTAGTTCGTAGTCCAATTGCAGTATCCTCAGCGTAATTAAATCATGCAATTGTGAATAAATAGTACCCAAAAATAATTTTACTAATGTATATCTAGAGCATGATATTATGAAGTTCCCAAACAAAACTTGTATTCTATATTTTCTCATATAAACAAAAATATCAAAATAGTCTCAATATCAAATAAATAAAAATTTATAAAATCACATAATAAGTTATTACAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E543445" ref_strand="+" ref_description="SGN-E543445 [TUS-65-E7](-)">
      <seq>taattgcactcttaaaatcagttcatccagattggagtagtgctgcaatcagatctgctctaatgaccacatcaacaatgaataatgtggttggtcagccaataaaaaatgccacaggggatgatgcaagcccgttcgaatacggatcaggacatttcaggccatcaagagcagtagatcctggactcgtttatgatgctacatacacggattatcttctctatctatgcactcaaaacgtaagcctagattcatcgttcagttgtcctgagaaaatacctacggcgagtaaccttaactatccatcccttgcaatagcaaacatgagaggaggatctatcaggagtgtcacaagagttgttacaaatgttggaaaagataactcgacttacgttttaggtgtgagttcacctcctggatacgttgttgatattgttccaaagaggttacatttcagcaaattgggagagaaacacagcttcaacataacaattactagtgttcaaaggagaaatgatttttcgtttggttggtacacatggagtgacggagtccatgtagttcgtagtccaattgcagtatcctcagcgtaattaaatcatgcaattgtgaataaatagtacccaaaaataattttactaatgtatatctagagcatgatattatgaagttcccaaacaaaacttgtattctatattttctcatataaacaaaaatatcaaaatagtctcaatatcaaataaaaaaaaaaaaaaaaaaaaactcgaggggggcccg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="-" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="59328" stop="57125"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59028" g_stop="58957" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="72" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58956" i_stop="58873" i_length="84">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.929" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58872" g_stop="58196" g_length="677"/>
          <reference_exon_boundary r_type="cDNA" r_start="73" r_stop="749" r_length="677" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="750" polyA_stop="763"/>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="-" ref_id="SGN-E543445" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>749</cumulative_length_of_scored_exons>
        <coverage percentage="0.964" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E543445" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59028" e_stop="58957"/>
          <exon e_start="58872" e_stop="58196"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAATTGCACTCTTAAAATCAGTTCATCCAGATTGGAGTAGTGCTGCAATCAGATCTGCTCTAATGACCACATGTAATTCTGTTTCTCTTACAAAAATTGAATTCCTTTTTGTACAGAATTTCTCACAGACATTTGTTCAATTTACTCTTGCTGCAGCAACAATGAATAATGTGGTTGGTCAGCCAATAAAAAATGCCACAGGGGATGATGCAAGCCCGTTCGAATACGGATCAGGACATTTCAGGCCATCAAGAGCAGTAGATCCTGGACTCGTTTATGATGCTACATACACGGATTATCTTCTCTATCTATGCACTCAAAACGTAAGCCTAGATTCATCGTTCAGTTGTCCTGAGAAAATACCTACGGCGAGTAACCTTAACTATCCATCCCTTGCAATAGCAAACATGAGAGGAGGATCTATCAGGAGTGTCACAAGAGTTGTTACAAATGTTGGAAAAGATAACTCGACTTACGTTTTAGGTGTGAGTTCACCTCCTGGATACGTTGTTGATATTGTTCCAAAGAGGTTACATTTCAGCAAATTGGGAGAGAAACACAGCTTCAACATAACAATTACTAGTGTTCAAAGGAGAAATGATTTTTCGTTTGGTTGGTACACATGGAGTGACGGAGTCCATGTAGTTCGTAGTCCAATTGCAGTATCCTCAGCGTAATTAAATCATGCAATTGTGAATAAATAGTACCCAAAAATAATTTTACTAATGTATATCTAGAGCATGATATTATGAAGTTCCCAAACAAAACTTGTATTCTATATTTTCTCATATAAACAAAAATATCAAAATAGTCTCAATATCAAATAAATAAAA</genome_strand>
        <mrna_strand>TAATTGCACTCTTAAAATCAGTTCATCCAGATTGGAGTAGTGCTGCAATCAGATCTGCTCTAATGACCACAT....................................................................................CAACAATGAATAATGTGGTTGGTCAGCCAATAAAAAATGCCACAGGGGATGATGCAAGCCCGTTCGAATACGGATCAGGACATTTCAGGCCATCAAGAGCAGTAGATCCTGGACTCGTTTATGATGCTACATACACGGATTATCTTCTCTATCTATGCACTCAAAACGTAAGCCTAGATTCATCGTTCAGTTGTCCTGAGAAAATACCTACGGCGAGTAACCTTAACTATCCATCCCTTGCAATAGCAAACATGAGAGGAGGATCTATCAGGAGTGTCACAAGAGTTGTTACAAATGTTGGAAAAGATAACTCGACTTACGTTTTAGGTGTGAGTTCACCTCCTGGATACGTTGTTGATATTGTTCCAAAGAGGTTACATTTCAGCAAATTGGGAGAGAAACACAGCTTCAACATAACAATTACTAGTGTTCAAAGGAGAAATGATTTTTCGTTTGGTTGGTACACATGGAGTGACGGAGTCCATGTAGTTCGTAGTCCAATTGCAGTATCCTCAGCGTAATTAAATCATGCAATTGTGAATAAATAGTACCCAAAAATAATTTTACTAATGTATATCTAGAGCATGATATTATGAAGTTCCCAAACAAAACTTGTATTCTATATTTTCTCATATAAACAAAAATATCAAAATAGTCTCAATATCAAATAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E543446" ref_strand="+" ref_description="SGN-E543446 [TUS-65-E7]">
      <seq>ggcagcagttggtcctcttaacgagacaagggactttcgatcaccgagagatgtagatggtcatggtactcatacagcaggcacagtgggtggtaggagagtagcaaatgcatcagctattggtggatttgcaaagggtacagctattggaggcgcccctaatgttcgactggccatttataaagtatgttggccagttccagatcagagtttagctgacggaaatgcatgtgctacggatgacattcttgctgcttttgatgatgctatagctgatggggttcatgtactcagtatttctctagggtctctacctacatcaacctactatacagaaaatcctattgcggttggatctttgcatgccgtgaagaagaatattgtagtatcttgtagtgctggaaatgatggtccaacaccttcaactgttggaaatgtagcgccgtgggttatcacagttggtgctagtagcatcgatcgagtcttttcatctccaattatgctcggaaatggaatgatcgttgagggtcaaacagtaactccaataaggaggaggagattgcatcctttggtttatgcaggagatgtagaaattagaggaattacggcgagcaatacaacaggaacatgtcttcctggtacactatcaagaaatcttgtgagaggaaaagttgtcctctgcggaaatacaggtatacaggcatcaatggaagtgaaaagagctggaggtgttgccgctattttaggaaatccatttaacgagattaaagtcaccccttatctggatcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="-" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="60676" stop="59126"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60376" g_stop="59851" g_length="526"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="526" r_length="526" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59850" i_stop="59766" i_length="85">
            <donor d_prob="0.960" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59765" g_stop="59668" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="527" r_stop="624" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="59667" i_stop="59591" i_length="77">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.908" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="59590" g_stop="59426" g_length="165"/>
          <reference_exon_boundary r_type="cDNA" r_start="625" r_stop="789" r_length="165" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="-" ref_id="SGN-E543446" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>789</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E543446" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60376" e_stop="59851"/>
          <exon e_start="59765" e_stop="59668"/>
          <exon e_start="59590" e_stop="59426"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCAGCAGTTGGTCCTCTTAACGAGACAAGGGACTTTCGATCACCGAGAGATGTAGATGGTCATGGTACTCATACAGCAGGCACAGTGGGTGGTAGGAGAGTAGCAAATGCATCAGCTATTGGTGGATTTGCAAAGGGTACAGCTATTGGAGGCGCCCCTAATGTTCGACTGGCCATTTATAAAGTATGTTGGCCAGTTCCAGATCAGAGTTTAGCTGACGGAAATGCATGTGCTACGGATGACATTCTTGCTGCTTTTGATGATGCTATAGCTGATGGGGTTCATGTACTCAGTATTTCTCTAGGGTCTCTACCTACATCAACCTACTATACAGAAAATCCTATTGCGGTTGGATCTTTGCATGCCGTGAAGAAGAATATTGTAGTATCTTGTAGTGCTGGAAATGATGGTCCAACACCTTCAACTGTTGGAAATGTAGCGCCGTGGGTTATCACAGTTGGTGCTAGTAGCATCGATCGAGTCTTTTCATCTCCAATTATGCTCGGAAATGGAATGATCGTTGAGGTGAGGATTGACTCGCATTCACTTTTGATTTGCTATGCACCAATAGTAACTAATAGAATCAGAATACTTAATTTGTGTTCTTTAGGGTCAAACAGTAACTCCAATAAGGAGGAGGAGATTGCATCCTTTGGTTTATGCAGGAGATGTAGAAATTAGAGGAATTACGGCGAGCAATACAACAGGGTAACATTCATTCTACTAGCAACTTTTTAATTATTTTAACCACTTAGAATTATGAAAACTAACTATTGAATATACAGAACATGTCTTCCTGGTACACTATCAAGAAATCTTGTGAGAGGAAAAGTTGTCCTCTGCGGAAATACAGGTATACAGGCATCAATGGAAGTGAAAAGAGCTGGAGGTGTTGCCGCTATTTTAGGAAATCCATTTAACGAGATTAAAGTCACCCCTTATCTGGATCC</genome_strand>
        <mrna_strand>GGCAGCAGTTGGTCCTCTTAACGAGACAAGGGACTTTCGATCACCGAGAGATGTAGATGGTCATGGTACTCATACAGCAGGCACAGTGGGTGGTAGGAGAGTAGCAAATGCATCAGCTATTGGTGGATTTGCAAAGGGTACAGCTATTGGAGGCGCCCCTAATGTTCGACTGGCCATTTATAAAGTATGTTGGCCAGTTCCAGATCAGAGTTTAGCTGACGGAAATGCATGTGCTACGGATGACATTCTTGCTGCTTTTGATGATGCTATAGCTGATGGGGTTCATGTACTCAGTATTTCTCTAGGGTCTCTACCTACATCAACCTACTATACAGAAAATCCTATTGCGGTTGGATCTTTGCATGCCGTGAAGAAGAATATTGTAGTATCTTGTAGTGCTGGAAATGATGGTCCAACACCTTCAACTGTTGGAAATGTAGCGCCGTGGGTTATCACAGTTGGTGCTAGTAGCATCGATCGAGTCTTTTCATCTCCAATTATGCTCGGAAATGGAATGATCGTTGAG.....................................................................................GGTCAAACAGTAACTCCAATAAGGAGGAGGAGATTGCATCCTTTGGTTTATGCAGGAGATGTAGAAATTAGAGGAATTACGGCGAGCAATACAACAGG.............................................................................AACATGTCTTCCTGGTACACTATCAAGAAATCTTGTGAGAGGAAAAGTTGTCCTCTGCGGAAATACAGGTATACAGGCATCAATGGAAGTGAAAAGAGCTGGAGGTGTTGCCGCTATTTTAGGAAATCCATTTAACGAGATTAAAGTCACCCCTTATCTGGATCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E305349" ref_strand="+" ref_description="SGN-E305349 [cLEX-15-H14]">
      <seq>tattggaggcgcccctaatgttcgactggccatttataaagtatgttggccagttccagatcagagtttagctgacggaaatgcatgtgctacggatgacattcttgctgcttttgatgatgctatagctgatggggttcatgtactcagtatttctctagggtctctacctacatcaacctactatacagaaaatcctattgcggttggatctttgcatgccgtgaagaagaatattgtagtatcttgtagtgctggaaatgatggtccaacaccttcaactgttggaaatgtagcgccgtgggttatcacagttggtgctagtagcatcgatcgagtcttttcatctccaattatgctcggaaatggaatgatcgttgagggtcaaacagtaactccaataaggaggaggagattgcatcctttggtttatgcaggagatgtagaaattagaggaattacggcgagcaatacaacaggaacatgtcttcctggtacactatcaagaaatcttgtgagaggaaaagttgtcctctgcggaaatacaggtatacaggcatcaatggaagtgaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="-" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="60532" stop="59197"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60232" g_stop="59851" g_length="382"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="382" r_length="382" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59850" i_stop="59766" i_length="85">
            <donor d_prob="0.960" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59765" g_stop="59668" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="383" r_stop="480" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="59667" i_stop="59591" i_length="77">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.908" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="59590" g_stop="59497" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="481" r_stop="574" r_length="94" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="-" ref_id="SGN-E305349" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>574</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E305349" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60232" e_stop="59851"/>
          <exon e_start="59765" e_stop="59668"/>
          <exon e_start="59590" e_stop="59497"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATTGGAGGCGCCCCTAATGTTCGACTGGCCATTTATAAAGTATGTTGGCCAGTTCCAGATCAGAGTTTAGCTGACGGAAATGCATGTGCTACGGATGACATTCTTGCTGCTTTTGATGATGCTATAGCTGATGGGGTTCATGTACTCAGTATTTCTCTAGGGTCTCTACCTACATCAACCTACTATACAGAAAATCCTATTGCGGTTGGATCTTTGCATGCCGTGAAGAAGAATATTGTAGTATCTTGTAGTGCTGGAAATGATGGTCCAACACCTTCAACTGTTGGAAATGTAGCGCCGTGGGTTATCACAGTTGGTGCTAGTAGCATCGATCGAGTCTTTTCATCTCCAATTATGCTCGGAAATGGAATGATCGTTGAGGTGAGGATTGACTCGCATTCACTTTTGATTTGCTATGCACCAATAGTAACTAATAGAATCAGAATACTTAATTTGTGTTCTTTAGGGTCAAACAGTAACTCCAATAAGGAGGAGGAGATTGCATCCTTTGGTTTATGCAGGAGATGTAGAAATTAGAGGAATTACGGCGAGCAATACAACAGGGTAACATTCATTCTACTAGCAACTTTTTAATTATTTTAACCACTTAGAATTATGAAAACTAACTATTGAATATACAGAACATGTCTTCCTGGTACACTATCAAGAAATCTTGTGAGAGGAAAAGTTGTCCTCTGCGGAAATACAGGTATACAGGCATCAATGGAAGTGAAA</genome_strand>
        <mrna_strand>TATTGGAGGCGCCCCTAATGTTCGACTGGCCATTTATAAAGTATGTTGGCCAGTTCCAGATCAGAGTTTAGCTGACGGAAATGCATGTGCTACGGATGACATTCTTGCTGCTTTTGATGATGCTATAGCTGATGGGGTTCATGTACTCAGTATTTCTCTAGGGTCTCTACCTACATCAACCTACTATACAGAAAATCCTATTGCGGTTGGATCTTTGCATGCCGTGAAGAAGAATATTGTAGTATCTTGTAGTGCTGGAAATGATGGTCCAACACCTTCAACTGTTGGAAATGTAGCGCCGTGGGTTATCACAGTTGGTGCTAGTAGCATCGATCGAGTCTTTTCATCTCCAATTATGCTCGGAAATGGAATGATCGTTGAG.....................................................................................GGTCAAACAGTAACTCCAATAAGGAGGAGGAGATTGCATCCTTTGGTTTATGCAGGAGATGTAGAAATTAGAGGAATTACGGCGAGCAATACAACAGG.............................................................................AACATGTCTTCCTGGTACACTATCAAGAAATCTTGTGAGAGGAAAAGTTGTCCTCTGCGGAAATACAGGTATACAGGCATCAATGGAAGTGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E301440" ref_strand="+" ref_description="SGN-E301440 [cLEX-8-M20]">
      <seq>gcagcagttggtcctcttaacgagacaagggactttcgatcaccgagagatgtagatggtcatggtactcatacagcaggcacagtgggtggtaggagagtagcaaatgcatcagctattggtggatttgcaaagggtacagctattggaggcgcccctaatgttcgactggccatttataaagtatgttggccagttccagatcagagtttagctgacggaaatgcatgtgctacggatgacattcttgctgcttttgatgatgctatagctgatggggttcatgtactcagtatttctctagggtctctacctacatcaacctactatacagaaaatcctattgcggttggatctttgcatgccgtgaagaagaatattgtagtatcttgtagtgctggaaatgatggtccaacaccttcaactgttggaaatgtagcgccgtgggttatcacagttggtgctagtagcatcgatcgagtcttttcatctccaattatgctcggaaatggaatgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="-" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="60675" stop="59558"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60375" g_stop="59858" g_length="518"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="518" r_length="518" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="-" ref_id="SGN-E301440" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>518</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E301440" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60375" e_stop="59858"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAGCAGTTGGTCCTCTTAACGAGACAAGGGACTTTCGATCACCGAGAGATGTAGATGGTCATGGTACTCATACAGCAGGCACAGTGGGTGGTAGGAGAGTAGCAAATGCATCAGCTATTGGTGGATTTGCAAAGGGTACAGCTATTGGAGGCGCCCCTAATGTTCGACTGGCCATTTATAAAGTATGTTGGCCAGTTCCAGATCAGAGTTTAGCTGACGGAAATGCATGTGCTACGGATGACATTCTTGCTGCTTTTGATGATGCTATAGCTGATGGGGTTCATGTACTCAGTATTTCTCTAGGGTCTCTACCTACATCAACCTACTATACAGAAAATCCTATTGCGGTTGGATCTTTGCATGCCGTGAAGAAGAATATTGTAGTATCTTGTAGTGCTGGAAATGATGGTCCAACACCTTCAACTGTTGGAAATGTAGCGCCGTGGGTTATCACAGTTGGTGCTAGTAGCATCGATCGAGTCTTTTCATCTCCAATTATGCTCGGAAATGGAATGAT</genome_strand>
        <mrna_strand>GCAGCAGTTGGTCCTCTTAACGAGACAAGGGACTTTCGATCACCGAGAGATGTAGATGGTCATGGTACTCATACAGCAGGCACAGTGGGTGGTAGGAGAGTAGCAAATGCATCAGCTATTGGTGGATTTGCAAAGGGTACAGCTATTGGAGGCGCCCCTAATGTTCGACTGGCCATTTATAAAGTATGTTGGCCAGTTCCAGATCAGAGTTTAGCTGACGGAAATGCATGTGCTACGGATGACATTCTTGCTGCTTTTGATGATGCTATAGCTGATGGGGTTCATGTACTCAGTATTTCTCTAGGGTCTCTACCTACATCAACCTACTATACAGAAAATCCTATTGCGGTTGGATCTTTGCATGCCGTGAAGAAGAATATTGTAGTATCTTGTAGTGCTGGAAATGATGGTCCAACACCTTCAACTGTTGGAAATGTAGCGCCGTGGGTTATCACAGTTGGTGCTAGTAGCATCGATCGAGTCTTTTCATCTCCAATTATGCTCGGAAATGGAATGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E707126" ref_strand="+" ref_description="SGN-E707126 [FA32AE10]">
      <seq>cactctctacgccggccgccactctcttcacccagtttctttctccggccaacttattccgagcagtttctactgagaaatggaattcttcgaaacttgggataataggcccgtcttttgacccttatctgcttaaatacaaggtttggctccacaaccaagttattcagctatccctaattatccatcattctcgctgaaactgaactgctgtgctagaatgggaggttctctacaatttcacttcttcagttgcaacattttgctaaagggaataaactcaaccgggttatcggataagttaaatgtatcctctgctcttaaacattccaagaagcagggtgaactttctcttactatctctgatgctgctgatcagaagaaagttcagaaggctggaaaagtagaacatcacttatggaagaaaagagaatctgctggatctggacaaaaagcgctgaatcttgttcgaattatttctggacttccaaatgagaaagagtctgtttatggtgcattagataaatggattgcatgggagacagagtttccattgattgcagctgctaaggctctaagaatcttaaggcaacaacggctgtggaaacgagtgattcaagtagctaagtggatgttgagcaaaggtcaaggtgcaacaatggcaacctatgatgcacttctactagcatttgatatggacaacagggtagatgaagcagaaacgttatggaatatgattttgcatacaagcacacggtctgtttcgaaacggctcttctccaggatgatttcattatatgatcatcatcatgtgccagacaagatagttgaggtgtttgcagacatggaggagttgggggtaaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="+" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="64216" stop="67715"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64511" g_stop="64598" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="87" r_length="87" r_score="0.977"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64599" i_stop="65186" i_length="588">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="65187" g_stop="65304" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="88" r_stop="205" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="65305" i_stop="65450" i_length="146">
            <donor d_prob="0.894" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="65451" g_stop="65546" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="206" r_stop="301" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="65547" i_stop="65625" i_length="79">
            <donor d_prob="0.690" d_score="1.00"/>
            <acceptor a_prob="0.857" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="65626" g_stop="65705" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="302" r_stop="381" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="65706" i_stop="65912" i_length="207">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="65913" g_stop="66006" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="382" r_stop="475" r_length="94" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="66007" i_stop="66134" i_length="128">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="66135" g_stop="66278" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="476" r_stop="619" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="66279" i_stop="66991" i_length="713">
            <donor d_prob="0.879" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="66992" g_stop="67204" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="620" r_stop="832" r_length="213" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="67205" i_stop="67381" i_length="177">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="67382" g_stop="67415" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="833" r_stop="866" r_length="34" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="+" ref_id="SGN-E707126" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>867</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E707126" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64511" e_stop="64598"/>
          <exon e_start="65187" e_stop="65304"/>
          <exon e_start="65451" e_stop="65546"/>
          <exon e_start="65626" e_stop="65705"/>
          <exon e_start="65913" e_stop="66006"/>
          <exon e_start="66135" e_stop="66278"/>
          <exon e_start="66992" e_stop="67204"/>
          <exon e_start="67382" e_stop="67415"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACAACTCTACGCCGGCCGCCACTCTCTTCACCCAGTTTCTTTCTCCGGCCAACTTATTCCGAGCAGTTTCTACTGAGAAATGGAATTGTACGTTCCCGCTTTTTTCTCCAATCCCTTTTATTAATGAAGTTAATCTCTGAGTGATGCTGAGTTTATCTTCCCACTTACTTTATTTATGTAGCAAAGACTCTGTTTTTTTCCTTACAATTGATATATATCTCATTGTTATTATATTAAATTGAGAAACTGAATCAAGTATTTGAGCTTAATGGCTGTCTGAGTAGTATAATTATCAGCTTTTTTTTTTGTCATTAAGTTGAGGTAATTACATTTATCTAGCCTCTTAATCGTTATAGCCACGGTTGTATCCAGAAAATAACATACCCAGTTTAATCTCATTGGGGAGGGTAGAGTGTTGCAGACCTTAGCAAGGTTTGAACAAAAAAGTAAAATTAACAATTGAGGAAAGAAAAGGATTGCAGCCATAGATGAGCTTTTAAGAATTTATGGTTGCTTGCGATTATCTATGGTTTTTCTTCTCAATTTTTAGATTATATGAAAGACAGAAGCTAAAATTTTAAAACACTATAGATGATAACTTTCTGCTGCATAGATTCAGTTTTCAGTTTTTCTGTTCTCTTGTTTTCTTAATGATAAAAATATGGACTGATGCAGCTTCGAAACTTGGGATAATAGGCCCGTCTTTTGACCCTTATCTGCTTAAATACAAGGTTTGGCTCCACAACCAAGTTATTCAGCTATCCCTAATTATCCATCATTCTCGCTGAAACTGGTAATACATATTGGTATTTTCTTTTTACATATAAGTCAGTTAATGCTAATAGTTTTGAGTTACAAATTTTATAATTTGCTTCTTTAAGAACCATTCTTGCTTATGAGAGTCCCCTGATGTGTATATTTGGGAAGAATTTATTTTAGAACTGCTGTGCTAGAATGGGAGGTTCTCTACAATTTCACTTCTTCAGTTGCAACATTTTGCTAAAGGGAATAAACTCAACCGGGTTATCGGATAAGGTTGGAGTGAGATGCTCCTTTTTGACTATTTTTGATACAGATTATTGCTCAGTGTCTAAGGTTCTGCTATCATATGCAGTTAAATGTATCCTCTGCTCTTAAACATTCCAAGAAGCAGGGTGAACTTTCTCTTACTATCTCTGATGCTGCTGATCAGAAGTAAGTAATGCTACCCATTAACACATTTGCTTGAACACCGAGTCATTTTTCATGTGTCTGTATCGGTTGGTCAATTTGATATCAGATACTCATTTTCTTGAAGTAATTGATTATATTCTATGTAGTATTATGTCAAGCTGAATTTCATGTTAAATGTTTTTTTTCTTCTCTAAACTAATTATCCTCTGTGTGGAATTGTGGATGCAGGAAAGTTCAGAAGGCTGGAAAAGTAGAACATCACTTATGGAAGAAAAGAGAATCTGCTGGATCTGGACAAAAAGCGCTGAATCTTGTTCGAATTGTAAGTCTTTTCAAATTACTCTGGCTAATTACTACAGTTTGTACACTGAAAGATATGTTTTCTCGTATACCTGAAGTAGACGTATTTTGACGTTGCCTTCTGTTTCTTTGTGATATGTAAATGGACAGATTTCTGGACTTCCAAATGAGAAAGAGTCTGTTTATGGTGCATTAGATAAATGGATTGCATGGGAGACAGAGTTTCCATTGATTGCAGCTGCTAAGGCTCTAAGAATCTTAAGGCAACAACGGCTGTGGAAACGAGTGATTCAAGTACGACGCATGAGAACTTTATTTTGTTATTTTTAGCATGGGTGGTATATTTGATAGCATTTTGCCTTGATAAATTCTGAAGCAATGTAGTGATAAATATCATTTCTTAACAACGACCTTACTTGAACAGGATCTGTTCTATAGGCTCGTACCACTGTATTATTGATTTCTAAGGTGACAGGAAACCAAGAGTTAAAAAAAAATATCATTTGTTAACAAGCTATGACATTAGAAGCCTTGTTTTAACTTCATAAGTATCATACTCAATTACTCAAATTGACCAAGTACAAGATGGCTCTGCTTCAGGTTCTTTTGTTTTTCCAGTGCAAGACAAAAAAACTCTGATGCGATTGCACTTTTAATTTTCCCAGTTGTGTGGATTATCTCGTCATTACTCAATCAAAGTCAATTCTTCCATCTTCCTTGATGTAGTTGTAGTTCATAATCTACTCGACAAGTATCATTTGAATGTATTGACTACTGGCTACATGGAAGTAGAAACTGAACTTGGTGATACTGAGATTTAGTTCTGCTCCTCTGGATTGTCGGGGCATGTTTAAATCGTCTTGGTAGGAAAGAGAGGTTTTGTGTAATTGAGCATATGTGAATCTTAATTGTTAGACAGATCATGGTGACTAGTTTGATTATGTGCTGAAGTATTTCAGAATAGCCATTGTCACTAAATAATACTTGCTCTTTAACACTATGCTTAGGTAGCTAAGTGGATGTTGAGCAAAGGTCAAGGTGCAACAATGGCAACCTATGATGCACTTCTACTAGCATTTGATATGGACAACAGGGTAGATGAAGCAGAAACGTTATGGAATATGATTTTGCATACAAGCACACGGTCTGTTTCGAAACGGCTCTTCTCCAGGATGATTTCATTATATGATCATCATCATGTGCCAGACAAGATAGTTGAGGTAAATGAATTTTTTTGCATTTTTCCAAAATTGGTCCAAGTATAACTGGTTGTTCAGTTCCCTCTCTGCAGAAAAGCATGATGCTGTGGATTATCCTCACTTCTGTCTTTCATAATGGATTTCCTCAACTGTCGGAAGTTTGATTCTATTTTTGAAGCATGCTTTTTGAAAATTCAGGTGTTTGCAGACATGGAGGAGTTGGGGGTAAAAC</genome_strand>
        <mrna_strand>CAC-TCTCTACGCCGGCCGCCACTCTCTTCACCCAGTTTCTTTCTCCGGCCAACTTATTCCGAGCAGTTTCTACTGAGAAATGGAATT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCGAAACTTGGGATAATAGGCCCGTCTTTTGACCCTTATCTGCTTAAATACAAGGTTTGGCTCCACAACCAAGTTATTCAGCTATCCCTAATTATCCATCATTCTCGCTGAAACTG..................................................................................................................................................AACTGCTGTGCTAGAATGGGAGGTTCTCTACAATTTCACTTCTTCAGTTGCAACATTTTGCTAAAGGGAATAAACTCAACCGGGTTATCGGATAAG...............................................................................TTAAATGTATCCTCTGCTCTTAAACATTCCAAGAAGCAGGGTGAACTTTCTCTTACTATCTCTGATGCTGCTGATCAGAA...............................................................................................................................................................................................................GAAAGTTCAGAAGGCTGGAAAAGTAGAACATCACTTATGGAAGAAAAGAGAATCTGCTGGATCTGGACAAAAAGCGCTGAATCTTGTTCGAATT................................................................................................................................ATTTCTGGACTTCCAAATGAGAAAGAGTCTGTTTATGGTGCATTAGATAAATGGATTGCATGGGAGACAGAGTTTCCATTGATTGCAGCTGCTAAGGCTCTAAGAATCTTAAGGCAACAACGGCTGTGGAAACGAGTGATTCAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGCTAAGTGGATGTTGAGCAAAGGTCAAGGTGCAACAATGGCAACCTATGATGCACTTCTACTAGCATTTGATATGGACAACAGGGTAGATGAAGCAGAAACGTTATGGAATATGATTTTGCATACAAGCACACGGTCTGTTTCGAAACGGCTCTTCTCCAGGATGATTTCATTATATGATCATCATCATGTGCCAGACAAGATAGTTGAG.................................................................................................................................................................................GTGTTTGCAGACATGGAGGAGTTGGGGGTAAAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E273910" ref_strand="+" ref_description="SGN-E273910 [cLEN-7-F5]">
      <seq>ttctttctccggccaacttattgcgagcagtttctactgagaaatggaattcttcgaaacttgggataataggcccgtattttgacccttatctgcttaaatacacggtttggctccacatccaagttatgcagctattcctaattatacatactcctcgctgaaactgaatttattttagaactgctgtgctagaatgggaggttctctacaatttcacttcttcagttgcaacattttgctaaagggaataaactcaaccgggttatcggataagttaaatgtatcctctgctcttaaacattccaagaagcacggcgaactttctcttactatctctgatgctgctgatcagaagaaagttcaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="+" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="64248" stop="66011"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64548" g_stop="64598" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="51" r_length="51" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64599" i_stop="65186" i_length="588">
            <donor d_prob="0.983" d_score="0.98"/>
            <acceptor a_prob="0.981" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="65187" g_stop="65304" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="52" r_stop="169" r_length="118" r_score="0.924"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="65305" i_stop="65438" i_length="134">
            <donor d_prob="0.894" d_score="0.86"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="65439" g_stop="65546" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="170" r_stop="277" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="65547" i_stop="65625" i_length="79">
            <donor d_prob="0.690" d_score="1.00"/>
            <acceptor a_prob="0.857" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="65626" g_stop="65705" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="278" r_stop="357" r_length="80" r_score="0.975"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="65706" i_stop="65912" i_length="207">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="65913" g_stop="65923" g_length="11"/>
          <reference_exon_boundary r_type="cDNA" r_start="358" r_stop="368" r_length="11" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="+" ref_id="SGN-E273910" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>368</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E273910" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64548" e_stop="64598"/>
          <exon e_start="65187" e_stop="65304"/>
          <exon e_start="65439" e_stop="65546"/>
          <exon e_start="65626" e_stop="65705"/>
          <exon e_start="65913" e_stop="65923"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTTTCTCCGGCCAACTTATTCCGAGCAGTTTCTACTGAGAAATGGAATTGTACGTTCCCGCTTTTTTCTCCAATCCCTTTTATTAATGAAGTTAATCTCTGAGTGATGCTGAGTTTATCTTCCCACTTACTTTATTTATGTAGCAAAGACTCTGTTTTTTTCCTTACAATTGATATATATCTCATTGTTATTATATTAAATTGAGAAACTGAATCAAGTATTTGAGCTTAATGGCTGTCTGAGTAGTATAATTATCAGCTTTTTTTTTTGTCATTAAGTTGAGGTAATTACATTTATCTAGCCTCTTAATCGTTATAGCCACGGTTGTATCCAGAAAATAACATACCCAGTTTAATCTCATTGGGGAGGGTAGAGTGTTGCAGACCTTAGCAAGGTTTGAACAAAAAAGTAAAATTAACAATTGAGGAAAGAAAAGGATTGCAGCCATAGATGAGCTTTTAAGAATTTATGGTTGCTTGCGATTATCTATGGTTTTTCTTCTCAATTTTTAGATTATATGAAAGACAGAAGCTAAAATTTTAAAACACTATAGATGATAACTTTCTGCTGCATAGATTCAGTTTTCAGTTTTTCTGTTCTCTTGTTTTCTTAATGATAAAAATATGGACTGATGCAGCTTCGAAACTTGGGATAATAGGCCCGTCTTTTGACCCTTATCTGCTTAAATACAAGGTTTGGCTCCACAACCAAGTTATTCAGCTATCCCTAATTATCCATCATTCTCGCTGAAACTGGTAATACATATTGGTATTTTCTTTTTACATATAAGTCAGTTAATGCTAATAGTTTTGAGTTACAAATTTTATAATTTGCTTCTTTAAGAACCATTCTTGCTTATGAGAGTCCCCTGATGTGTATATTTGGGAAGAATTTATTTTAGAACTGCTGTGCTAGAATGGGAGGTTCTCTACAATTTCACTTCTTCAGTTGCAACATTTTGCTAAAGGGAATAAACTCAACCGGGTTATCGGATAAGGTTGGAGTGAGATGCTCCTTTTTGACTATTTTTGATACAGATTATTGCTCAGTGTCTAAGGTTCTGCTATCATATGCAGTTAAATGTATCCTCTGCTCTTAAACATTCCAAGAAGCAGGGTGAACTTTCTCTTACTATCTCTGATGCTGCTGATCAGAAGTAAGTAATGCTACCCATTAACACATTTGCTTGAACACCGAGTCATTTTTCATGTGTCTGTATCGGTTGGTCAATTTGATATCAGATACTCATTTTCTTGAAGTAATTGATTATATTCTATGTAGTATTATGTCAAGCTGAATTTCATGTTAAATGTTTTTTTTCTTCTCTAAACTAATTATCCTCTGTGTGGAATTGTGGATGCAGGAAAGTTCAGA</genome_strand>
        <mrna_strand>TTCTTTCTCCGGCCAACTTATTGCGAGCAGTTTCTACTGAGAAATGGAATT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCGAAACTTGGGATAATAGGCCCGTATTTTGACCCTTATCTGCTTAAATACACGGTTTGGCTCCACATCCAAGTTATGCAGCTATTCCTAATTATACATACTCCTCGCTGAAACTG......................................................................................................................................AATTTATTTTAGAACTGCTGTGCTAGAATGGGAGGTTCTCTACAATTTCACTTCTTCAGTTGCAACATTTTGCTAAAGGGAATAAACTCAACCGGGTTATCGGATAAG...............................................................................TTAAATGTATCCTCTGCTCTTAAACATTCCAAGAAGCACGGCGAACTTTCTCTTACTATCTCTGATGCTGCTGATCAGAA...............................................................................................................................................................................................................GAAAGTTCAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E275573" ref_strand="+" ref_description="SGN-E275573 [cLEN-10-J5]">
      <seq>cgaaacttgggataataggcccgtcttttgacccttatctgcttaaatacaaggtttggctccacaaccaagttattcagctatccctaattatccatcattctcgctgaaactggtaatacatattggtattttctttttacatataagtcagttaatgctaatagttttgagttacaaattttataatttgcttctttaagaaccattcttgcttatgagagtcccctgatgtgtatatttgggaagaatttattttagaactgctgtgctagaatgggaggttctctacaatttcacttcttcagttgcaacattttgctaaagggaataaactcaaccgggttatcggataagttaaatgtatcctctgctcttaaacattccaagaagcagggtgaactttctcttactatctctgatgctgctgatcagaagaaagttcagaaggctggaaaagtagaacatcacttatggaagaaaagagaatctgctggatctggacaaaaagcgctgaatcttgttcgaattatttctgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="+" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="64890" stop="66308"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65190" g_stop="65546" g_length="357"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="357" r_length="357" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="65547" i_stop="65625" i_length="79">
            <donor d_prob="0.690" d_score="1.00"/>
            <acceptor a_prob="0.857" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="65626" g_stop="65705" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="358" r_stop="437" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="65706" i_stop="65912" i_length="207">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="65913" g_stop="66006" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="438" r_stop="531" r_length="94" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="66007" i_stop="66134" i_length="128">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="66135" g_stop="66143" g_length="9"/>
          <reference_exon_boundary r_type="cDNA" r_start="532" r_stop="540" r_length="9" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="+" ref_id="SGN-E275573" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>540</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E275573" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65190" e_stop="65546"/>
          <exon e_start="65626" e_stop="65705"/>
          <exon e_start="65913" e_stop="66006"/>
          <exon e_start="66135" e_stop="66143"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAAACTTGGGATAATAGGCCCGTCTTTTGACCCTTATCTGCTTAAATACAAGGTTTGGCTCCACAACCAAGTTATTCAGCTATCCCTAATTATCCATCATTCTCGCTGAAACTGGTAATACATATTGGTATTTTCTTTTTACATATAAGTCAGTTAATGCTAATAGTTTTGAGTTACAAATTTTATAATTTGCTTCTTTAAGAACCATTCTTGCTTATGAGAGTCCCCTGATGTGTATATTTGGGAAGAATTTATTTTAGAACTGCTGTGCTAGAATGGGAGGTTCTCTACAATTTCACTTCTTCAGTTGCAACATTTTGCTAAAGGGAATAAACTCAACCGGGTTATCGGATAAGGTTGGAGTGAGATGCTCCTTTTTGACTATTTTTGATACAGATTATTGCTCAGTGTCTAAGGTTCTGCTATCATATGCAGTTAAATGTATCCTCTGCTCTTAAACATTCCAAGAAGCAGGGTGAACTTTCTCTTACTATCTCTGATGCTGCTGATCAGAAGTAAGTAATGCTACCCATTAACACATTTGCTTGAACACCGAGTCATTTTTCATGTGTCTGTATCGGTTGGTCAATTTGATATCAGATACTCATTTTCTTGAAGTAATTGATTATATTCTATGTAGTATTATGTCAAGCTGAATTTCATGTTAAATGTTTTTTTTCTTCTCTAAACTAATTATCCTCTGTGTGGAATTGTGGATGCAGGAAAGTTCAGAAGGCTGGAAAAGTAGAACATCACTTATGGAAGAAAAGAGAATCTGCTGGATCTGGACAAAAAGCGCTGAATCTTGTTCGAATTGTAAGTCTTTTCAAATTACTCTGGCTAATTACTACAGTTTGTACACTGAAAGATATGTTTTCTCGTATACCTGAAGTAGACGTATTTTGACGTTGCCTTCTGTTTCTTTGTGATATGTAAATGGACAGATTTCTGGA</genome_strand>
        <mrna_strand>CGAAACTTGGGATAATAGGCCCGTCTTTTGACCCTTATCTGCTTAAATACAAGGTTTGGCTCCACAACCAAGTTATTCAGCTATCCCTAATTATCCATCATTCTCGCTGAAACTGGTAATACATATTGGTATTTTCTTTTTACATATAAGTCAGTTAATGCTAATAGTTTTGAGTTACAAATTTTATAATTTGCTTCTTTAAGAACCATTCTTGCTTATGAGAGTCCCCTGATGTGTATATTTGGGAAGAATTTATTTTAGAACTGCTGTGCTAGAATGGGAGGTTCTCTACAATTTCACTTCTTCAGTTGCAACATTTTGCTAAAGGGAATAAACTCAACCGGGTTATCGGATAAG...............................................................................TTAAATGTATCCTCTGCTCTTAAACATTCCAAGAAGCAGGGTGAACTTTCTCTTACTATCTCTGATGCTGCTGATCAGAA...............................................................................................................................................................................................................GAAAGTTCAGAAGGCTGGAAAAGTAGAACATCACTTATGGAAGAAAAGAGAATCTGCTGGATCTGGACAAAAAGCGCTGAATCTTGTTCGAATT................................................................................................................................ATTTCTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E614284" ref_strand="+" ref_description="SGN-E614284 [64069]">
      <seq>tgaagagtagtatgtacttggttgatattatacatactggaaaatactcttgtcagataaaatccaagttgctgtagttgtgttgatatatccctggtgagattgtgtattgaatacgaagactctacttggctgatgatacaagacataactagaagtccacaagattgatgaaagtgtaacctcatcgcagttgatttcttatgcagaagcaagactaccaaaccatactacacctcatagtgaaagagattttccccgttatactgatatcattgggtttttcagtacaaagattggttttagttctgttggtcttaacatgtttgtatcttaatttcttgtacagagacgttccattcaactattaatggtataaagtattcatgtaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="+" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="67297" stop="68290"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67596" g_stop="67990" g_length="395"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="400" r_length="400" r_score="0.901"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="+" ref_id="SGN-E614284" ref_strand="+">
        <total_alignment_score>0.901</total_alignment_score>
        <cumulative_length_of_scored_exons>395</cumulative_length_of_scored_exons>
        <coverage percentage="0.988" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E614284" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67596" e_stop="67990"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAGAGTAGTATGTACTTGGTTGATATTATACATTCTGGAAAATA--CTTGTCAGATAAAATCCAAGTTGCTATAGGTGTGTTGATATATCCCCGGTGAGATTGTGTATTGAATACAAAGACTCTACTTGGCTGATGATACAAGATATAACTAGAAGTCCACAAGGTTGATGAAAGTGTAACCTCATCGCAGTTGATTTCTTGTGTGTAAGCAAGACTACCAAACCATACTACACCTTATAGT----GAGATTTTCCACGTTATACTGATATCATTGGG-TTTTCAGTACAAAGGTTGGTTTTAGTTTTGTTTGTCTTAACATGTTTGTATCTAAATTTCTTGTACAGAGATGTTCCATTCAACTATTAATGGTTTATAAAGTATTCATGTAATCAATCAA</genome_strand>
        <mrna_strand>TGAAGAGTAGTATGTACTTGGTTGATATTATACATACTGGAAAATACTCTTGTCAGATAAAATCCAAGTTGCTGTAGTTGTGTTGATATATCCCTGGTGAGATTGTGTATTGAATACGAAGACTCTACTTGGCTGATGATACAAGACATAACTAGAAGTCCACAAGATTGATGAAAGTGTAACCTCATCGCAGTTGATTTCTTATGCAGAAGCAAGACTACCAAACCATACTACACCTCATAGTGAAAGAGATTTTCCCCGTTATACTGATATCATTGGGTTTTTCAGTACAAAGATTGGTTTTAGTTCTGTTGGTCTTAACATGTTTGTATCTTAATTTCTTGTACAGAGACGTTCCATTCAACTATTAATGG--TATAAAGTATTCATGTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E422648" ref_strand="+" ref_description="SGN-E422648 [STM-40-D6]">
      <seq>ctgattttattctctagcgagatatctttgcttcagatgtaactaaagtaaagttatgtgcaccaattgagggaaaacagagcattatatacccctatactgctatgggtttgagtatttatgccaattttacagcaattggactcctaacattatggattccatcattccaggaataccatccaaacacatactgatctttcggaattctatgca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="+" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="67832" stop="68648"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68132" g_stop="68348" g_length="217"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="216" r_length="216" r_score="0.963"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="+" ref_id="SGN-E422648" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>217</cumulative_length_of_scored_exons>
        <coverage percentage="1.005" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E422648" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68132" e_stop="68348"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGA-TTTATTCTCTAGCGAGATATCTTTGCTTCAGATGTAACTAAAGTAAAGTTATGTGCACCAATTGAGGGAACACAGAGCACTATATATCCCTATACTGCTATGGGTTTTTGAGTACTTATGCCAATTTTACAGCAATTGGACTCCTAACATTATGGATTCCATCATTCCAGGAATACCATCCAAACACATACTGATCTTTCGGAATTCTATGCA</genome_strand>
        <mrna_strand>CTGATTTTATTCTCTAGCGAGATATCTTTGCTTCAGATGTAACTAAAGTAAAGTTATGTGCACCAATTGAGGGAAAACAGAGCATTATATACCCCTATACTGCTATGGG--TTTGAGTATTTATGCCAATTTTACAGCAATTGGACTCCTAACATTATGGATTCCATCATTCCAGGAATACCATCCAAACACATACTGATCTTTCGGAATTCTATGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E741001" ref_strand="+" ref_description="SGN-E741001 [LC23DD08]">
      <seq>cgctaaaacagttttgcatgctaaaccagcaccttacatggcttcattcactagtagaggtccaagtgcagttgcaccggatatcctcaagccggatatcacggcaccagggctgaatatattggcagcatggagtggaggatcatcccctacgaagctagatattgacaaacgtgtagtagagtataacatactctcaggtacttccatgtcttgccctcatgttggtggcgccgcagcacttttgaaggctatacatcccacttggagcagtgctgcaataagatctgctctgataacttcagctgaattacaaaataatgtcggtgagcaaataactgatgcatctgggaagccagcagatccattccagttcggaggagggcatttcaggccatcaaaggcagcagatcctggacttgtctacgatgcttcctaccaagactatcttctcttcctttgtgcctctggtgttaagcatcttgacaaatccttcaagtgtcctaagaaatcacattctcctagagacctaaattacccgtctctggctattccaaatctcaatggcactgtgactgctagaagaagattgacaaatgttggtgcaccaaagagcgtttactttgccagtgtcaaacctccattgggattctctattgagatttcaccacccatcttgtcttttaaccacgttggctccaagaaaacgttcactatcacagtgaaagctcaccgtgacatgatgcatagaattccgaaagatcagtatgtgtttggatggtattcctggaatgatggaatccataatgttaggagtccaattgctgtaaaattggcataagtactcaaaaacccatagcagtatagggatatatagtgctctgtgttcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="-" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="69593" stop="67902"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69294" g_stop="69204" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="91" r_length="91" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69203" i_stop="69104" i_length="100">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69103" g_stop="68890" g_length="214"/>
          <reference_exon_boundary r_type="cDNA" r_start="92" r_stop="305" r_length="214" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="68889" i_stop="68787" i_length="103">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="68786" g_stop="68202" g_length="585"/>
          <reference_exon_boundary r_type="cDNA" r_start="306" r_stop="890" r_length="585" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="-" ref_id="SGN-E741001" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>890</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E741001" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69294" e_stop="69204"/>
          <exon e_start="69103" e_stop="68890"/>
          <exon e_start="68786" e_stop="68202"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCTAAAACAGTTTTGCATGCTAAACCAGCACCTTACATGGCTTCATTCACTAGTAGAGGTCCAAGTGCAGTTGCACCGGATATCCTCAAGGTCAGAATTTACACAAGAAACTAAAAGATAATTTACCTGATTTGTGATATATTATGCATTGTCTTCTAAACAAAATTCTCATTTTGTGCTCTTCCCACAGCCGGATATCACGGCACCAGGGCTGAATATATTGGCAGCATGGAGTGGAGGATCATCCCCTACGAAGCTAGATATTGACAAACGTGTAGTAGAGTATAACATACTCTCAGGTACTTCCATGTCTTGCCCTCATGTTGGTGGCGCCGCAGCACTTTTGAAGGCTATACATCCCACTTGGAGCAGTGCTGCAATAAGATCTGCTCTGATAACTTCAGGTACCTTTAACTGCCCCTGAAATTTGTCAGGGGCTAGAAGTTGAACTCTTCTTTTGTCTATAAGTTTCCACACTATACTGATTTAATCAATGTATAATTTCAGCTGAATTACAAAATAATGTCGGTGAGCAAATAACTGATGCATCTGGGAAGCCAGCAGATCCATTCCAGTTCGGAGGAGGGCATTTCAGGCCATCAAAGGCAGCAGATCCTGGACTTGTCTACGATGCTTCCTACCAAGACTATCTTCTCTTCCTTTGTGCCTCTGGTGTTAAGCATCTTGACAAATCCTTCAAGTGTCCTAAGAAATCACATTCTCCTAGAGACCTAAATTACCCGTCTCTGGCTATTCCAAATCTCAATGGCACTGTGACTGCTAGAAGAAGATTGACAAATGTTGGTGCACCAAAGAGCGTTTACTTTGCCAGTGTCAAACCTCCATTGGGATTCTCTATTGAGATTTCACCACCCATCTTGTCTTTTAACCACGTTGGCTCCAAGAAAACGTTCACTATCACAGTGAAAGCTCACCGTGACATGATGCATAGAATTCCGAAAGATCAGTATGTGTTTGGATGGTATTCCTGGAATGATGGAATCCATAATGTTAGGAGTCCAATTGCTGTAAAATTGGCATAAGTACTCAAAAACCCATAGCAGTATAGGGATATATAGTGCTCTGTGTTCC</genome_strand>
        <mrna_strand>CGCTAAAACAGTTTTGCATGCTAAACCAGCACCTTACATGGCTTCATTCACTAGTAGAGGTCCAAGTGCAGTTGCACCGGATATCCTCAAG....................................................................................................CCGGATATCACGGCACCAGGGCTGAATATATTGGCAGCATGGAGTGGAGGATCATCCCCTACGAAGCTAGATATTGACAAACGTGTAGTAGAGTATAACATACTCTCAGGTACTTCCATGTCTTGCCCTCATGTTGGTGGCGCCGCAGCACTTTTGAAGGCTATACATCCCACTTGGAGCAGTGCTGCAATAAGATCTGCTCTGATAACTTCAG.......................................................................................................CTGAATTACAAAATAATGTCGGTGAGCAAATAACTGATGCATCTGGGAAGCCAGCAGATCCATTCCAGTTCGGAGGAGGGCATTTCAGGCCATCAAAGGCAGCAGATCCTGGACTTGTCTACGATGCTTCCTACCAAGACTATCTTCTCTTCCTTTGTGCCTCTGGTGTTAAGCATCTTGACAAATCCTTCAAGTGTCCTAAGAAATCACATTCTCCTAGAGACCTAAATTACCCGTCTCTGGCTATTCCAAATCTCAATGGCACTGTGACTGCTAGAAGAAGATTGACAAATGTTGGTGCACCAAAGAGCGTTTACTTTGCCAGTGTCAAACCTCCATTGGGATTCTCTATTGAGATTTCACCACCCATCTTGTCTTTTAACCACGTTGGCTCCAAGAAAACGTTCACTATCACAGTGAAAGCTCACCGTGACATGATGCATAGAATTCCGAAAGATCAGTATGTGTTTGGATGGTATTCCTGGAATGATGGAATCCATAATGTTAGGAGTCCAATTGCTGTAAAATTGGCATAAGTACTCAAAAACCCATAGCAGTATAGGGATATATAGTGCTCTGTGTTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E689297" ref_strand="+" ref_description="SGN-E689297 [t3_tus_80_P13]">
      <seq>tttcactgtgatagtgaacgttttcttggagccaacgtggttaaaagacaagatgggtggtgaaatctcaatagagaatcccaatggaggtttgacactggcaaagtaaacgctctttggtgcaccaacatttgtcaatcttcttctagcagtcacagtgccattgagatttggaatagccagagacgggtaatttaggtctctaggagaatgtgatttcttaggacacttgaaggatttgtcaagatgcttaacaccagaggcacaaaggaagagaagatagtcttggtaggaagcatcgtagacaagtccaggatctgctgcctttgatggcctgaaatgccctcctccgaactggaatggatctgctggcttcccagatgcatcagttatttgctcaccgacattattttgtaattcagctgaaattatacattgattaaatcagtatagtgtggaaacttatagacaaaagaagagttcaacttctagcccctgacaaatttcaggggcagttaaaggtacctgaagttatcagagcagatcttattgcagcactgctccaagtgggatgtatagccttcaaaagtgctgcggcgccaccaacatgagggcaagacatggaagtacctgagagtatgttatactctactacacgtttgtcaatatctagcttcgtaggggatgatcctccactccatgctgccaatatattcagccctggtgccgtgatatccggctgtgggaagagcacaaaatgagaattttgtttagaagacaatgcataatatatcacaaatcagtacaattggtgacaaaaatttcctgtcaacactgctagcaccaaccgtgataatccaaggagctgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="+" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="68065" stop="70279"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68365" g_stop="69167" g_length="803"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="803" r_length="803" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69168" i_stop="69913" i_length="746">
            <donor d_prob="0.955" d_score="1.00"/>
            <acceptor a_prob="0.582" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69914" g_stop="69979" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="804" r_stop="869" r_length="66" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="+" ref_id="SGN-E689297" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>869</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E689297" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68365" e_stop="69167"/>
          <exon e_start="69914" e_stop="69979"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCACTGTGATAGTGAACGTTTTCTTGGAGCCAACGTGGTTAAAAGACAAGATGGGTGGTGAAATCTCAATAGAGAATCCCAATGGAGGTTTGACACTGGCAAAGTAAACGCTCTTTGGTGCACCAACATTTGTCAATCTTCTTCTAGCAGTCACAGTGCCATTGAGATTTGGAATAGCCAGAGACGGGTAATTTAGGTCTCTAGGAGAATGTGATTTCTTAGGACACTTGAAGGATTTGTCAAGATGCTTAACACCAGAGGCACAAAGGAAGAGAAGATAGTCTTGGTAGGAAGCATCGTAGACAAGTCCAGGATCTGCTGCCTTTGATGGCCTGAAATGCCCTCCTCCGAACTGGAATGGATCTGCTGGCTTCCCAGATGCATCAGTTATTTGCTCACCGACATTATTTTGTAATTCAGCTGAAATTATACATTGATTAAATCAGTATAGTGTGGAAACTTATAGACAAAAGAAGAGTTCAACTTCTAGCCCCTGACAAATTTCAGGGGCAGTTAAAGGTACCTGAAGTTATCAGAGCAGATCTTATTGCAGCACTGCTCCAAGTGGGATGTATAGCCTTCAAAAGTGCTGCGGCGCCACCAACATGAGGGCAAGACATGGAAGTACCTGAGAGTATGTTATACTCTACTACACGTTTGTCAATATCTAGCTTCGTAGGGGATGATCCTCCACTCCATGCTGCCAATATATTCAGCCCTGGTGCCGTGATATCCGGCTGTGGGAAGAGCACAAAATGAGAATTTTGTTTAGAAGACAATGCATAATATATCACAAATCAGGTAAATTATCTTTTAGTTTCTTGTGTAAATTCTGACCTTGAGGATATCCGGTGCAACTGCACTTGGACCTCTACTAGTGAATGAAGCCATGTAAGGTGCTGGTTTAGCATGCAAAACTGTTTTAGCTGGGATTATATAAGCTACAGGGGACTTTGTAGAACTGATATAGTTGAGAATCTGAACTCCACTTTTATAGTCCACTGCTGTGGCTGGAAGAAGATGAGCATCTGCTGCTAACTCTGCCCCATTTGCTTTACTATTTCCTAGTATGTAACCAATTCCTCCTGCCCTTTTCACCTCTCCGCCTTTTCCTACTCTTGTCCCATTCCCTCTCAAGCACATTACTATTTTCCCCTTGGCCTTTTCCGGCGAAAGAGAACCTGGTAAACACTGCCTGAAATGTTTTTGCAAAAGTTCAGATATAATCACCTGAAAAATATTGAAACTTGGAAGGAAGGAAGGGGAGTACCCTGCTAAATCTTTGGTTACGTTAGTGTTGATCACCTCTCCTGCATAAACTAGAGGGTACATCTTCTTCTTCAGCTTGTAAGGTGTAACTGTTTGTCCCTGATTTCATGCATAACATCCAAAATGAAGAACGGCTTCAATTTAGGAAACATGTTCTAATCCTAGTGTTTAATTGTTTTAGTTGAAAGAGTAGTCGAAAATTGAATAGATTATCATGTTTTCTTGTGTTAACGTGTGTAATAGTTTCGGCTTACCATGAATTTCTTGCCATTTCCTAGTACAATTGGTGACAAAAATTTCCTGTCAACACTGCTAGCACCAACAGTGATAATCCAAGGAGCTGT</genome_strand>
        <mrna_strand>TTTCACTGTGATAGTGAACGTTTTCTTGGAGCCAACGTGGTTAAAAGACAAGATGGGTGGTGAAATCTCAATAGAGAATCCCAATGGAGGTTTGACACTGGCAAAGTAAACGCTCTTTGGTGCACCAACATTTGTCAATCTTCTTCTAGCAGTCACAGTGCCATTGAGATTTGGAATAGCCAGAGACGGGTAATTTAGGTCTCTAGGAGAATGTGATTTCTTAGGACACTTGAAGGATTTGTCAAGATGCTTAACACCAGAGGCACAAAGGAAGAGAAGATAGTCTTGGTAGGAAGCATCGTAGACAAGTCCAGGATCTGCTGCCTTTGATGGCCTGAAATGCCCTCCTCCGAACTGGAATGGATCTGCTGGCTTCCCAGATGCATCAGTTATTTGCTCACCGACATTATTTTGTAATTCAGCTGAAATTATACATTGATTAAATCAGTATAGTGTGGAAACTTATAGACAAAAGAAGAGTTCAACTTCTAGCCCCTGACAAATTTCAGGGGCAGTTAAAGGTACCTGAAGTTATCAGAGCAGATCTTATTGCAGCACTGCTCCAAGTGGGATGTATAGCCTTCAAAAGTGCTGCGGCGCCACCAACATGAGGGCAAGACATGGAAGTACCTGAGAGTATGTTATACTCTACTACACGTTTGTCAATATCTAGCTTCGTAGGGGATGATCCTCCACTCCATGCTGCCAATATATTCAGCCCTGGTGCCGTGATATCCGGCTGTGGGAAGAGCACAAAATGAGAATTTTGTTTAGAAGACAATGCATAATATATCACAAATCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACAATTGGTGACAAAAATTTCCTGTCAACACTGCTAGCACCAACCGTGATAATCCAAGGAGCTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E328999" ref_strand="+" ref_description="SGN-E328999 [cTOC-24-K11]">
      <seq>ttcactgtgatagtgaacgttttcttggagccaacgtggttaaaagacaagatgggtggtgaaatctcaatagagaatcccaatggaggtttgacactggcaaagtaaacgctctttggtgcaccaacatttgtcaatcttcttctagcagtcacagtgccattgagatttggaatagccagagacgggtaatttaggtctctaggagaatgtgatttcttaggacacttgaaggatttgtcaagatgcttaacaccagaggcacaaaggaagagaagatagtcttggtaggaagcatcgtagacaagtccaggatctgctgcctttgatggcctgaaatgccctcctccgaactggaatggatctgctggcttcccagatgcatcagttatttgctcaccgacattattttgtaattcagctgaaattatacattgattaaatcagtatagtgtggaaacttatagacaaaagaagagttcaacttctagcccctgacaaatttcaggggcagttaaaggtacctgaagttatcagagcagatcttattgcagcactgctccaagtgggatgtatagccttcaaaagtgctgcggcgccaccaacatgagggcaagacatggaagtacctgagagtatgttatactctactacacgtttgtcaatatctagcttcgtangggatgatcctccactccatgctgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="+" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="68066" stop="69370"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68366" g_stop="69070" g_length="705"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="705" r_length="705" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="+" ref_id="SGN-E328999" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>705</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E328999" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68366" e_stop="69070"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCACTGTGATAGTGAACGTTTTCTTGGAGCCAACGTGGTTAAAAGACAAGATGGGTGGTGAAATCTCAATAGAGAATCCCAATGGAGGTTTGACACTGGCAAAGTAAACGCTCTTTGGTGCACCAACATTTGTCAATCTTCTTCTAGCAGTCACAGTGCCATTGAGATTTGGAATAGCCAGAGACGGGTAATTTAGGTCTCTAGGAGAATGTGATTTCTTAGGACACTTGAAGGATTTGTCAAGATGCTTAACACCAGAGGCACAAAGGAAGAGAAGATAGTCTTGGTAGGAAGCATCGTAGACAAGTCCAGGATCTGCTGCCTTTGATGGCCTGAAATGCCCTCCTCCGAACTGGAATGGATCTGCTGGCTTCCCAGATGCATCAGTTATTTGCTCACCGACATTATTTTGTAATTCAGCTGAAATTATACATTGATTAAATCAGTATAGTGTGGAAACTTATAGACAAAAGAAGAGTTCAACTTCTAGCCCCTGACAAATTTCAGGGGCAGTTAAAGGTACCTGAAGTTATCAGAGCAGATCTTATTGCAGCACTGCTCCAAGTGGGATGTATAGCCTTCAAAAGTGCTGCGGCGCCACCAACATGAGGGCAAGACATGGAAGTACCTGAGAGTATGTTATACTCTACTACACGTTTGTCAATATCTAGCTTCGTAGGGGATGATCCTCCACTCCATGCTGC</genome_strand>
        <mrna_strand>TTCACTGTGATAGTGAACGTTTTCTTGGAGCCAACGTGGTTAAAAGACAAGATGGGTGGTGAAATCTCAATAGAGAATCCCAATGGAGGTTTGACACTGGCAAAGTAAACGCTCTTTGGTGCACCAACATTTGTCAATCTTCTTCTAGCAGTCACAGTGCCATTGAGATTTGGAATAGCCAGAGACGGGTAATTTAGGTCTCTAGGAGAATGTGATTTCTTAGGACACTTGAAGGATTTGTCAAGATGCTTAACACCAGAGGCACAAAGGAAGAGAAGATAGTCTTGGTAGGAAGCATCGTAGACAAGTCCAGGATCTGCTGCCTTTGATGGCCTGAAATGCCCTCCTCCGAACTGGAATGGATCTGCTGGCTTCCCAGATGCATCAGTTATTTGCTCACCGACATTATTTTGTAATTCAGCTGAAATTATACATTGATTAAATCAGTATAGTGTGGAAACTTATAGACAAAAGAAGAGTTCAACTTCTAGCCCCTGACAAATTTCAGGGGCAGTTAAAGGTACCTGAAGTTATCAGAGCAGATCTTATTGCAGCACTGCTCCAAGTGGGATGTATAGCCTTCAAAAGTGCTGCGGCGCCACCAACATGAGGGCAAGACATGGAAGTACCTGAGAGTATGTTATACTCTACTACACGTTTGTCAATATCTAGCTTCGTANGGGATGATCCTCCACTCCATGCTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E326229" ref_strand="+" ref_description="SGN-E326229 [cTOC-16-F6]">
      <seq>ttcactgtgatagtgaacgttttcttggagccaacgtggttaaaagacaagatgggtggtgaaatctcaatagagaatcccaatggaggtttgacactggcaaagtaaacgctctttggtgcaccaacatttgtcaatcttcttctagcagtcacagtgccattgagatttggaatagccagagacgggtaatttaggtctctaggagaatgtgatttcttaggacacttgaaggatttgtcaagatgcttaacaccagaggcacaaaggaagagaagatagtcttggtaggaagcatcgtagacaagtccaggatctgctgcctttgatggcctgaaatgccctcctccgaactggaatggatctgctggcttcccagatgcatcagttatttgctcaccgacattattttgtaattcagctgaaattatacattgattaaatcagtat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="+" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="68066" stop="69115"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68366" g_stop="68815" g_length="450"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="450" r_length="450" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="+" ref_id="SGN-E326229" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>450</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E326229" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68366" e_stop="68815"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCACTGTGATAGTGAACGTTTTCTTGGAGCCAACGTGGTTAAAAGACAAGATGGGTGGTGAAATCTCAATAGAGAATCCCAATGGAGGTTTGACACTGGCAAAGTAAACGCTCTTTGGTGCACCAACATTTGTCAATCTTCTTCTAGCAGTCACAGTGCCATTGAGATTTGGAATAGCCAGAGACGGGTAATTTAGGTCTCTAGGAGAATGTGATTTCTTAGGACACTTGAAGGATTTGTCAAGATGCTTAACACCAGAGGCACAAAGGAAGAGAAGATAGTCTTGGTAGGAAGCATCGTAGACAAGTCCAGGATCTGCTGCCTTTGATGGCCTGAAATGCCCTCCTCCGAACTGGAATGGATCTGCTGGCTTCCCAGATGCATCAGTTATTTGCTCACCGACATTATTTTGTAATTCAGCTGAAATTATACATTGATTAAATCAGTAT</genome_strand>
        <mrna_strand>TTCACTGTGATAGTGAACGTTTTCTTGGAGCCAACGTGGTTAAAAGACAAGATGGGTGGTGAAATCTCAATAGAGAATCCCAATGGAGGTTTGACACTGGCAAAGTAAACGCTCTTTGGTGCACCAACATTTGTCAATCTTCTTCTAGCAGTCACAGTGCCATTGAGATTTGGAATAGCCAGAGACGGGTAATTTAGGTCTCTAGGAGAATGTGATTTCTTAGGACACTTGAAGGATTTGTCAAGATGCTTAACACCAGAGGCACAAAGGAAGAGAAGATAGTCTTGGTAGGAAGCATCGTAGACAAGTCCAGGATCTGCTGCCTTTGATGGCCTGAAATGCCCTCCTCCGAACTGGAATGGATCTGCTGGCTTCCCAGATGCATCAGTTATTTGCTCACCGACATTATTTTGTAATTCAGCTGAAATTATACATTGATTAAATCAGTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E448730" ref_strand="+" ref_description="SGN-E448730 [cSTS-4-E12]">
      <seq>cctcgtgccgattgtatttttgtaaagaatatgaattccttttcccactctcatttcttcttctccttgtgcttcccctcttggcttcatgtcatgaaaaacaggtttatatagtgtattttggagggcataatgaggagaaagcattgtatgagattgaagaaaaccatcactcatatttattatcagtgaaggataatgaagaagaagccaaatcttctctcatttatagctataaacacagcatcaatggatttgccgcacttctcacccctcatcaagcctctaaattatctgagttggaagaagtggtatcagtgtataaaagtgagccaagaaaatatagtttgcatacaacaaggtcatgggagttttctggagtggaagagtcagtggcaccaaattctttgaacaaagatgacttgctattgaaagccagatatggaaaagatgttattattggggttcttgatagcgggctatggccagaatctaagagctttagtgatgaacggataggaccaattccaaagtcatggaaaggaatctgccaatctggagatgctttcaactcttcaaact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="-" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="73851" stop="71975"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73551" g_stop="73457" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="11" r_stop="104" r_length="94" r_score="0.947"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="73456" i_stop="73357" i_length="100">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="73356" g_stop="73164" g_length="193"/>
          <reference_exon_boundary r_type="cDNA" r_start="105" r_stop="297" r_length="193" r_score="0.964"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="73163" i_stop="73026" i_length="138">
            <donor d_prob="0.974" d_score="0.96"/>
            <acceptor a_prob="0.938" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="73025" g_stop="72846" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="298" r_stop="477" r_length="180" r_score="0.956"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="72845" i_stop="72380" i_length="466">
            <donor d_prob="0.950" d_score="0.92"/>
            <acceptor a_prob="0.974" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="72379" g_stop="72275" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="478" r_stop="582" r_length="105" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="-" ref_id="SGN-E448730" ref_strand="+">
        <total_alignment_score>0.960</total_alignment_score>
        <cumulative_length_of_scored_exons>573</cumulative_length_of_scored_exons>
        <coverage percentage="0.985" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E448730" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73551" e_stop="73457"/>
          <exon e_start="73356" e_stop="73164"/>
          <exon e_start="73025" e_stop="72846"/>
          <exon e_start="72379" e_stop="72275"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTGTATTTTTGTTAAAAATATGAATTCATTTTCCACACTCTCATTTCTTCTTCTCCTTGTGCTTCCTCTCTTGGCTTCATGTCATGAAAAACAGGTACTACTATATTTAATCATTCTCATTTCTCATTAATTAATTCTTTCTTTATAATCTCTAGTTATGTTAATTATTATTAATTTTTTTTATGGTGTTGAAGGTTTATATAGTGTATTTTGGAGGGCATAATGGGGAGAAAGCATTGCATGAGATTGAAGAAAACCATCACTCATATTTATTATCAGTAAAAGATAATGAAGAAGAAGCCAAATCTTCTCTCATTTATAGTTATAAACACAGCATCAATGGATTTGCCGCACTTCTCACCCCTCATCAAGCTTTTAAATTATCTGGTATACAGTGACAGAATCAGAATTTTCATTAAAAAGAGTCAAAATAAACATATACATGAGTAATATCATCTAACATCTTTTACTTATCTATGAAATGTTACGATGTTAATCTGATAGTGTAAAAATTCTTTTAAACAGAGTTGGAAGAAGTGGTATCGGTGTATAAAAGTGAGCCAAGAAAATATAGTTTGCATACAACAAGGTCATGGGAATTTTCTGGAGTGGAAGAGTCAGTAGCACCAAATTATTTGAACAAAGATGACTTGCTATTGAAAGCCAGATATGGAAAAAATATCATTATTGGAGTTCTTGATAGCGGTACATTTTATTTTATTTTATTTATTTACTATACTTATTTGGTTACCATTATTAATGAATTTCCCTTTTGTTTAAAATTTAAATGTATTTCCAATATGGACACACAATATAATTAACGTGTAAATTACAGTTTCTCTTATTTGTGATTTATTTAGAAAAGACCTTGTATAACACGTGACTTTGTTCAAACAACTTAACCTATTATTAAAATTCATCTTTTTTTAGTGGTCTATTGAATTCTAAAATTTAATCTTTATTGAGTTCTAGACTGATAGTTTATATATATTAAACACGAAATTTGGATCAAAAGTTTATCGATCTCTCCTACTTGGAATTTAGAAGCTTCATTCATGTAACTTCTCATACAGTCACTAAACTGATTATTAACGTAGAAAGTATTTTTTTTGAGTTAATAACTATCAGTTGAGTGACGGTAATGAATGTTGTTGGATGATGCACCATATAGGGCTATGGCCAGAATCTAAGAGCTTTAGTGATGAAGGGATTGGACCAATACCAAAGTCATGGAAAGGAATCTGCCAATCTGGAGATGCTTTCAACTCTTCAAACT</genome_strand>
        <mrna_strand>ATTGTATTTTTGTAAAGAATATGAATTCCTTTTCC-CACTCTCATTTCTTCTTCTCCTTGTGCTTCCCCTCTTGGCTTCATGTCATGAAAAACAG....................................................................................................GTTTATATAGTGTATTTTGGAGGGCATAATGAGGAGAAAGCATTGTATGAGATTGAAGAAAACCATCACTCATATTTATTATCAGTGAAGGATAATGAAGAAGAAGCCAAATCTTCTCTCATTTATAGCTATAAACACAGCATCAATGGATTTGCCGCACTTCTCACCCCTCATCAAGCCTCTAAATTATCTG..........................................................................................................................................AGTTGGAAGAAGTGGTATCAGTGTATAAAAGTGAGCCAAGAAAATATAGTTTGCATACAACAAGGTCATGGGAGTTTTCTGGAGTGGAAGAGTCAGTGGCACCAAATTCTTTGAACAAAGATGACTTGCTATTGAAAGCCAGATATGGAAAAGATGTTATTATTGGGGTTCTTGATAGCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTATGGCCAGAATCTAAGAGCTTTAGTGATGAACGGATAGGACCAATTCCAAAGTCATGGAAAGGAATCTGCCAATCTGGAGATGCTTTCAACTCTTCAAACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E283948" ref_strand="+" ref_description="SGN-E283948 [cLER-13-J1]">
      <seq>aaaaaccattttgagaacaaagtgaggtattccataaactatacaagaaaaataatctatgaagaaaaatagagtgtgagcgatattttagtaaggtggaaaccaaaagagtgttgttccttttgagtgtgtattagttactttgagtattgtattcgtgactacacagtttaaaactctttactatattaatatcagttgctcctct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="+" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="91851" stop="92657"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92151" g_stop="92357" g_length="207"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="208" r_length="208" r_score="0.913"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="+" ref_id="SGN-E283948" ref_strand="+">
        <total_alignment_score>0.913</total_alignment_score>
        <cumulative_length_of_scored_exons>207</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E283948" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92151" e_stop="92357"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAACCATTTTGAGAGCAATGTGAGGTATTCCATAGACTATACCAG-AAAATAGTCTGTGAAGAAAAATAGAGTGTGAGCGATATTTTAGTAAGACGGAAACCAAAAGAGTGTTGTTCTTTTTGAGTGTGTAGTAGTCACTTTGAGTATTGTATTCGTGACTACACAGTGTAAAATTCCTTACTATAGTAATATCAATTGCTCCTCT</genome_strand>
        <mrna_strand>AAAAACCATTTTGAGAACAAAGTGAGGTATTCCATAAACTATACAAGAAAAATAATCTATGAAGAAAAATAGAGTGTGAGCGATATTTTAGTAAGGTGGAAACCAAAAGAGTGTTGTTCCTTTTGAGTGTGTATTAGTTACTTTGAGTATTGTATTCGTGACTACACAGTTTAAAACTCTTTACTATATTAATATCAGTTGCTCCTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E726360" ref_strand="+" ref_description="SGN-E726360 [LA11CD06]">
      <seq>ggaaactcaaacgtctacttgatttccttttttggtccggctaacatctcgacagttctcaaccggccggctagtcggcgaccgtcgttaccggcgatgcggagaaccgacgtgactccctcaatctttcttctcttactcttcttccttcttctctctaagccatcaccttgttcctccttttctttcccattttccaactaccaagccgtcttctctctttctcactcgctattctcccgcgtcgctaatctccggcaagctcgcggagactatgatggcgctgcccgagctcgatccattgctaaaaaactagagaatggtatgggtattggtttctggaaagtcatgtggaacgtgggttgggattatgctcgaaattatgcttggagagatgctacgtcatttgaaatattcggtgctttctctgatctgaatgaaattctgcgtggtcttagcgacttttcaagtgtcagttcagatagggaaagggttaactggatgaatcgaaattatgaaaatcttttcagagtttcgaaatctctcttcggtaaatttcggaaggtgtttcgacaaccaggtccgctgaaggaagtcatggagacacttcagaaggaagtattagaaggtgatttgcttaaggactgccttgaattgggttctactgatttgaagggcctgctcacagttttgaaggatatttcttcaaaatatacctctactttctcaacgcgagcagatctgtgactgagtgaagttgaaaccaaggtattatggttaactctgtaacaagttttgttgctctacagtacagtactaacagaggtgtaaaagctcaatgtagaagaagctgaattttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="+" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="98033" stop="101130"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98333" g_stop="98911" g_length="579"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="579" r_length="579" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98912" i_stop="100549" i_length="1638">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="100550" g_stop="100830" g_length="281"/>
          <reference_exon_boundary r_type="cDNA" r_start="580" r_stop="860" r_length="281" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="+" ref_id="SGN-E726360" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>860</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E726360" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98333" e_stop="98911"/>
          <exon e_start="100550" e_stop="100830"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAACTCAAACGTCTACTTGATTTCCTTTTTTGGTCCGGCTAACATCTCGACAGTTCTCAACCGGCCGGCTAGTCGGCGACCGTCGTTACCGGCGATGCGGAGAACCGACGTGACTCCCTCAATCTTTCTTCTCTTACTCTTCTTCCTTCTTCTCTCTAAGCCATCACCTTGTTCCTCCTTTTCTTTCCCATTTTCCAACTACCAAGCCGTCTTCTCTCTTTCTCACTCGCTATTCTCCCGCGTCGCTAATCTCCGGCAAGCTCGCGGAGACTATGATGGCGCTGCCCGAGCTCGATCCATTGCTAAAAAACTAGAGAATGGTATGGGTATTGGTTTCTGGAAAGTCATGTGGAACGTGGGTTGGGATTATGCTCGAAATTATGCTTGGAGAGATGCTACGTCATTTGAAATATTCGGTGCTTTCTCTGATCTGAATGAAATTCTGCGTGGTCTTAGCGACTTTTCAAGTGTCAGTTCAGATAGGGAAAGGGTTAACTGGATGAATCGAAATTATGAAAATCTTTTCAGAGTTTCGAAATCTCTCTTCGGTAAATTTCGGAAGGTGTTTCGACAACCAGTAAGTTTCTACTTTTATATTTTTAGGTTAATTAGTTGAACAGTATTGGCATATTTACATTCTACAGAGACATCCTTTCGACCACACTAATGGATAGAACTTAAATGTTTCTTGTGAATTGAGCACTATTAAGAAGAAGTTCTAGTTGGAAAGATTACAACTTTTTGTCTTGAATTCTTAAAGCGAAACTTATTTTCGGACAATTTGCTTTTGCTAAAGCGAAACTTATTTTGGACTGAGGGAGTAATGAGTATAGTAGAAGCAGCTCTGTATCTAGGTTCCAATGCCACCACTTTGATGTGCTAAATGTTAGGTGAAAGCTCTGCTGGTGTCTGATCAATCTTGGGTACAACTTATATGTGTAGCTACGCATTGTGCAAATTTGATGCCTCTGCTATAAGCCTGTAACTTCAGTTTAGAGATTGAATTCCATGCAATTGATTGAACTATAAATTTACAAACAAAATCCTTGAAAACAGTTAAAAATTAAAATGATAATGTTCTTTTACACACTGAGGAAATAATGGGAGGGTGACCATCATGGACACCAAACTAAGGAAGTTCTAACTTCATTGTATCGAAGTTATGTCTTATCGCACGGGCTTAGTGGTAGCATTTACAAAGTCTTTGATTACTTTATAAATAAAAGTTGCAAATTTGAAAGAGATATTATAGTTAATATTCTGAGACCAATCAAACAAACGACCAATGATTATTGTCAACAAAGCAAGAAGCATAGACTATAGACTCTCAGGATCAAGTGAGAACTTTGATAGGTATCTTGTCCTAGATATTGAATTGCTCATATAATTGATTGGCGTGAAGACTTACAAACCAAAACCAAAATAAAAATAAAAATGTAAAATGACAAAGTTATGCATATTTGGGAAACAAGAAATGGTAACCATAACCAAGGAAGTTCTCTAGGGTGTCGTAATCGGACAGGTAAAGTAATAAATTTGAAAGAGGAGAACATGGCTAACATGTTGGGACTTGGGAATGTGAAACTTAAATTTGACTGTTTTTGAAGATCAAAAGATCGTATTAGACAAGAAAGGAGTTTAGAGTTAAATTTTGCCCCTTCTTCATTCAGTTGTTCATCAAAAAGTTTTGAGGTTATTGATTGTTAGTTTACTGAAGATTGGTGCAATTTATCTCTCTATTTTGATCGAGATTTTTAATACACGGCCTGCCAATTCTTGGGCCTCCAAATTGGATGTTTCAAATTACTATAAGTAGGTCAAACCTGCAATAATAGTTGGTCAAATTTTCCATTCACCTCCAACTTGAATAATTAATACACTCTGGGAACATTCATCTTTAGCTATGTTGTATGCTTGAATTGATGCTCATATTGAGCACACAGTAAAATGGAACTAGTATGGGACATTATTAGTCTTGTCTTGAGCACACAGGAAACTCGACTAGTACGGGATACTGATGAAATTATCATATAAATGATTTTATGCTTATTTTTCCCCCTAAATCACCAAAACAGAGAATCATGAATATCTTAATTGGAGGTAAAAAAAAGGAAGTAGCATGGACCAGAACGCGAGGATGAAAACTGAATGTATGTCGACTCTGTTGTTGTGCACTTGGTCTATGTTTGTTTTTATTTTTTTTATTTTGAAGCAGGGTCCGCTGAAGGAAGTCATGGAGACACTTCAGAAGGAAGTATTAGAAGGTGATTTGCTTAAGGACTGCCTTGAATTGGGTTCTACTGATTTGAAGGGCCTGCTCACAGTTTTGAAGGATATTTCTTCAAAATATACCTCTACTTTCTCAACGCGAGCAGATCTGTGACTGAGTGAAGTTGAAACCAAGGTATTATGGTTAACTCTGTAACAAGTTTTGTTGCTCTACAGTACAGTACTAACAGAGGTGTAAAAGCTCAATGTAGAAGAAGCTGAATTTTT</genome_strand>
        <mrna_strand>GGAAACTCAAACGTCTACTTGATTTCCTTTTTTGGTCCGGCTAACATCTCGACAGTTCTCAACCGGCCGGCTAGTCGGCGACCGTCGTTACCGGCGATGCGGAGAACCGACGTGACTCCCTCAATCTTTCTTCTCTTACTCTTCTTCCTTCTTCTCTCTAAGCCATCACCTTGTTCCTCCTTTTCTTTCCCATTTTCCAACTACCAAGCCGTCTTCTCTCTTTCTCACTCGCTATTCTCCCGCGTCGCTAATCTCCGGCAAGCTCGCGGAGACTATGATGGCGCTGCCCGAGCTCGATCCATTGCTAAAAAACTAGAGAATGGTATGGGTATTGGTTTCTGGAAAGTCATGTGGAACGTGGGTTGGGATTATGCTCGAAATTATGCTTGGAGAGATGCTACGTCATTTGAAATATTCGGTGCTTTCTCTGATCTGAATGAAATTCTGCGTGGTCTTAGCGACTTTTCAAGTGTCAGTTCAGATAGGGAAAGGGTTAACTGGATGAATCGAAATTATGAAAATCTTTTCAGAGTTTCGAAATCTCTCTTCGGTAAATTTCGGAAGGTGTTTCGACAACCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCCGCTGAAGGAAGTCATGGAGACACTTCAGAAGGAAGTATTAGAAGGTGATTTGCTTAAGGACTGCCTTGAATTGGGTTCTACTGATTTGAAGGGCCTGCTCACAGTTTTGAAGGATATTTCTTCAAAATATACCTCTACTTTCTCAACGCGAGCAGATCTGTGACTGAGTGAAGTTGAAACCAAGGTATTATGGTTAACTCTGTAACAAGTTTTGTTGCTCTACAGTACAGTACTAACAGAGGTGTAAAAGCTCAATGTAGAAGAAGCTGAATTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E729319" ref_strand="+" ref_description="SGN-E729319 [LA20CG11]">
      <seq>ctcaaacgtctacttgatttccttttttggtccggctaacatctcgacagttctcaaccggccggctagtcggcgaccgtcgttaccggcgatgcggagaaccgacgtgactccctcaatctttcttctcttactcttcttccttcttctctctaagccatcaccttgttcctccttttctttcccattttccaactaccaagccgtcttctctctttctcactcgctattctcccgcgtcgctaatctccggcaagctcgcggagactatgatggcgctgcccgagctcgatccattgctaaaaaactagagaatggtatgggtattggtttctggaaagtcatgtggaacgtgggttgggattatgctcgaaattatgcttggagagatgctacgtcatttgaaatattcggtgctttctctgatctgaatgaaattctgcgtggtcttagcgacttttcaagtgtcagttcagatagggaaagggttaactggatgaatcgaaattatgaaaatcttttcagagtttcgaaatctctcttcggtaaatttcggaaggtgttcgacaaccaggtccgctgaagga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="+" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="98038" stop="99218"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98338" g_stop="98911" g_length="574"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="573" r_length="573" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="+" ref_id="SGN-E729319" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>574</cumulative_length_of_scored_exons>
        <coverage percentage="0.978" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E729319" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98338" e_stop="98911"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCAAACGTCTACTTGATTTCCTTTTTTGGTCCGGCTAACATCTCGACAGTTCTCAACCGGCCGGCTAGTCGGCGACCGTCGTTACCGGCGATGCGGAGAACCGACGTGACTCCCTCAATCTTTCTTCTCTTACTCTTCTTCCTTCTTCTCTCTAAGCCATCACCTTGTTCCTCCTTTTCTTTCCCATTTTCCAACTACCAAGCCGTCTTCTCTCTTTCTCACTCGCTATTCTCCCGCGTCGCTAATCTCCGGCAAGCTCGCGGAGACTATGATGGCGCTGCCCGAGCTCGATCCATTGCTAAAAAACTAGAGAATGGTATGGGTATTGGTTTCTGGAAAGTCATGTGGAACGTGGGTTGGGATTATGCTCGAAATTATGCTTGGAGAGATGCTACGTCATTTGAAATATTCGGTGCTTTCTCTGATCTGAATGAAATTCTGCGTGGTCTTAGCGACTTTTCAAGTGTCAGTTCAGATAGGGAAAGGGTTAACTGGATGAATCGAAATTATGAAAATCTTTTCAGAGTTTCGAAATCTCTCTTCGGTAAATTTCGGAAGGTGTTTCGACAACCA</genome_strand>
        <mrna_strand>CTCAAACGTCTACTTGATTTCCTTTTTTGGTCCGGCTAACATCTCGACAGTTCTCAACCGGCCGGCTAGTCGGCGACCGTCGTTACCGGCGATGCGGAGAACCGACGTGACTCCCTCAATCTTTCTTCTCTTACTCTTCTTCCTTCTTCTCTCTAAGCCATCACCTTGTTCCTCCTTTTCTTTCCCATTTTCCAACTACCAAGCCGTCTTCTCTCTTTCTCACTCGCTATTCTCCCGCGTCGCTAATCTCCGGCAAGCTCGCGGAGACTATGATGGCGCTGCCCGAGCTCGATCCATTGCTAAAAAACTAGAGAATGGTATGGGTATTGGTTTCTGGAAAGTCATGTGGAACGTGGGTTGGGATTATGCTCGAAATTATGCTTGGAGAGATGCTACGTCATTTGAAATATTCGGTGCTTTCTCTGATCTGAATGAAATTCTGCGTGGTCTTAGCGACTTTTCAAGTGTCAGTTCAGATAGGGAAAGGGTTAACTGGATGAATCGAAATTATGAAAATCTTTTCAGAGTTTCGAAATCTCTCTTCGGTAAATTTCGGAAGGTG-TTCGACAACCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E348049" ref_strand="+" ref_description="SGN-E348049 [cTOF-31-I18]">
      <seq>acatctcgacagttctcaaccggccggctagtcggcgaccgtcgttaccggcgatgcggagaaccgacgtgactccctcaatctttcttctcttactcttcttccttcttctctctaagccatcaccttgttcctccttttctttcccattttccaactaccaagccgtcttctctctttctcactcgctattctcccgcgtcgctaatctccggcaagctcgcggagactatgatggcgctgcccgagctcgatccattgctaaaaaactagagaatggtatgggtattggtttctggaaagtcatgtggaacgtgggttgggattatgctcgaaattatgcttggagagatgctacgtcatttgaaatattcggtgctttctctgatctgaatgaaattctgcgtggtcttagcgacttttcaagtgtcagttcagatagggaaagggttaactggatgaatcgaaattatgaaaatcttttcagagtttcgaaatctctcttcggtaaatttcggaaggtgtttcgacaaccaggtccgctgaaggaagtcatggagacacttcagaaggaagtattagaaggtgatttgcttaaggactgccttgaattgggttctactgatttgaagggcctgctcacagttttgaaggatatttcttcaaaaatacctctactt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="+" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="98076" stop="100994"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98376" g_stop="98911" g_length="536"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="536" r_length="536" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98912" i_stop="100549" i_length="1638">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="100550" g_stop="100694" g_length="145"/>
          <reference_exon_boundary r_type="cDNA" r_start="537" r_stop="680" r_length="144" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="+" ref_id="SGN-E348049" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>681</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E348049" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98376" e_stop="98911"/>
          <exon e_start="100550" e_stop="100694"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACATCTCGACAGTTCTCAACCGGCCGGCTAGTCGGCGACCGTCGTTACCGGCGATGCGGAGAACCGACGTGACTCCCTCAATCTTTCTTCTCTTACTCTTCTTCCTTCTTCTCTCTAAGCCATCACCTTGTTCCTCCTTTTCTTTCCCATTTTCCAACTACCAAGCCGTCTTCTCTCTTTCTCACTCGCTATTCTCCCGCGTCGCTAATCTCCGGCAAGCTCGCGGAGACTATGATGGCGCTGCCCGAGCTCGATCCATTGCTAAAAAACTAGAGAATGGTATGGGTATTGGTTTCTGGAAAGTCATGTGGAACGTGGGTTGGGATTATGCTCGAAATTATGCTTGGAGAGATGCTACGTCATTTGAAATATTCGGTGCTTTCTCTGATCTGAATGAAATTCTGCGTGGTCTTAGCGACTTTTCAAGTGTCAGTTCAGATAGGGAAAGGGTTAACTGGATGAATCGAAATTATGAAAATCTTTTCAGAGTTTCGAAATCTCTCTTCGGTAAATTTCGGAAGGTGTTTCGACAACCAGTAAGTTTCTACTTTTATATTTTTAGGTTAATTAGTTGAACAGTATTGGCATATTTACATTCTACAGAGACATCCTTTCGACCACACTAATGGATAGAACTTAAATGTTTCTTGTGAATTGAGCACTATTAAGAAGAAGTTCTAGTTGGAAAGATTACAACTTTTTGTCTTGAATTCTTAAAGCGAAACTTATTTTCGGACAATTTGCTTTTGCTAAAGCGAAACTTATTTTGGACTGAGGGAGTAATGAGTATAGTAGAAGCAGCTCTGTATCTAGGTTCCAATGCCACCACTTTGATGTGCTAAATGTTAGGTGAAAGCTCTGCTGGTGTCTGATCAATCTTGGGTACAACTTATATGTGTAGCTACGCATTGTGCAAATTTGATGCCTCTGCTATAAGCCTGTAACTTCAGTTTAGAGATTGAATTCCATGCAATTGATTGAACTATAAATTTACAAACAAAATCCTTGAAAACAGTTAAAAATTAAAATGATAATGTTCTTTTACACACTGAGGAAATAATGGGAGGGTGACCATCATGGACACCAAACTAAGGAAGTTCTAACTTCATTGTATCGAAGTTATGTCTTATCGCACGGGCTTAGTGGTAGCATTTACAAAGTCTTTGATTACTTTATAAATAAAAGTTGCAAATTTGAAAGAGATATTATAGTTAATATTCTGAGACCAATCAAACAAACGACCAATGATTATTGTCAACAAAGCAAGAAGCATAGACTATAGACTCTCAGGATCAAGTGAGAACTTTGATAGGTATCTTGTCCTAGATATTGAATTGCTCATATAATTGATTGGCGTGAAGACTTACAAACCAAAACCAAAATAAAAATAAAAATGTAAAATGACAAAGTTATGCATATTTGGGAAACAAGAAATGGTAACCATAACCAAGGAAGTTCTCTAGGGTGTCGTAATCGGACAGGTAAAGTAATAAATTTGAAAGAGGAGAACATGGCTAACATGTTGGGACTTGGGAATGTGAAACTTAAATTTGACTGTTTTTGAAGATCAAAAGATCGTATTAGACAAGAAAGGAGTTTAGAGTTAAATTTTGCCCCTTCTTCATTCAGTTGTTCATCAAAAAGTTTTGAGGTTATTGATTGTTAGTTTACTGAAGATTGGTGCAATTTATCTCTCTATTTTGATCGAGATTTTTAATACACGGCCTGCCAATTCTTGGGCCTCCAAATTGGATGTTTCAAATTACTATAAGTAGGTCAAACCTGCAATAATAGTTGGTCAAATTTTCCATTCACCTCCAACTTGAATAATTAATACACTCTGGGAACATTCATCTTTAGCTATGTTGTATGCTTGAATTGATGCTCATATTGAGCACACAGTAAAATGGAACTAGTATGGGACATTATTAGTCTTGTCTTGAGCACACAGGAAACTCGACTAGTACGGGATACTGATGAAATTATCATATAAATGATTTTATGCTTATTTTTCCCCCTAAATCACCAAAACAGAGAATCATGAATATCTTAATTGGAGGTAAAAAAAAGGAAGTAGCATGGACCAGAACGCGAGGATGAAAACTGAATGTATGTCGACTCTGTTGTTGTGCACTTGGTCTATGTTTGTTTTTATTTTTTTTATTTTGAAGCAGGGTCCGCTGAAGGAAGTCATGGAGACACTTCAGAAGGAAGTATTAGAAGGTGATTTGCTTAAGGACTGCCTTGAATTGGGTTCTACTGATTTGAAGGGCCTGCTCACAGTTTTGAAGGATATTTCTTCAAAATATACCTCTACTT</genome_strand>
        <mrna_strand>ACATCTCGACAGTTCTCAACCGGCCGGCTAGTCGGCGACCGTCGTTACCGGCGATGCGGAGAACCGACGTGACTCCCTCAATCTTTCTTCTCTTACTCTTCTTCCTTCTTCTCTCTAAGCCATCACCTTGTTCCTCCTTTTCTTTCCCATTTTCCAACTACCAAGCCGTCTTCTCTCTTTCTCACTCGCTATTCTCCCGCGTCGCTAATCTCCGGCAAGCTCGCGGAGACTATGATGGCGCTGCCCGAGCTCGATCCATTGCTAAAAAACTAGAGAATGGTATGGGTATTGGTTTCTGGAAAGTCATGTGGAACGTGGGTTGGGATTATGCTCGAAATTATGCTTGGAGAGATGCTACGTCATTTGAAATATTCGGTGCTTTCTCTGATCTGAATGAAATTCTGCGTGGTCTTAGCGACTTTTCAAGTGTCAGTTCAGATAGGGAAAGGGTTAACTGGATGAATCGAAATTATGAAAATCTTTTCAGAGTTTCGAAATCTCTCTTCGGTAAATTTCGGAAGGTGTTTCGACAACCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCCGCTGAAGGAAGTCATGGAGACACTTCAGAAGGAAGTATTAGAAGGTGATTTGCTTAAGGACTGCCTTGAATTGGGTTCTACTGATTTGAAGGGCCTGCTCACAGTTTTGAAGGATATTTCTTCAAAA-ATACCTCTACTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E464063" ref_strand="+" ref_description="SGN-E464063 [cPRO-16-H24]">
      <seq>gttctcaaccgtccggctagtcggccaccgtcgctaccggcaatgcggaggaccggcgtgactccctcagtctttcttctcttcctcttcttccttcttctctctaagccaccaccttgttcctccttttctttcccattttccaactaccacgccgtcctctctctctcgcattcgctgttctcccgcgttgctaatctccgggaaactcgcggagactacgatggcgcttcccgagctcgatctattgctagaaaactggagaatggtatgggtattggtttctggaaagtcatgtggaacgtgggttgggactatgctcgaaattatgcttggagagatgctacgtcgtttgaaatgttcggtgctttctctgatctgaatgaaattctgcgtggtcttagcgacttttcaagtgtcagttcagatagggaaagggttaagtggatgaatcggaattatgaaaatcttttcagagtttcaaaatctctttttggtaaatttcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="+" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="98087" stop="99192"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98387" g_stop="98892" g_length="506"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="506" r_length="506" r_score="0.939"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="+" ref_id="SGN-E464063" ref_strand="+">
        <total_alignment_score>0.939</total_alignment_score>
        <cumulative_length_of_scored_exons>506</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E464063" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98387" e_stop="98892"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTCTCAACCGGCCGGCTAGTCGGCGACCGTCGTTACCGGCGATGCGGAGAACCGACGTGACTCCCTCAATCTTTCTTCTCTTACTCTTCTTCCTTCTTCTCTCTAAGCCATCACCTTGTTCCTCCTTTTCTTTCCCATTTTCCAACTACCAAGCCGTCTTCTCTCTTTCTCACTCGCTATTCTCCCGCGTCGCTAATCTCCGGCAAGCTCGCGGAGACTATGATGGCGCTGCCCGAGCTCGATCCATTGCTAAAAAACTAGAGAATGGTATGGGTATTGGTTTCTGGAAAGTCATGTGGAACGTGGGTTGGGATTATGCTCGAAATTATGCTTGGAGAGATGCTACGTCATTTGAAATATTCGGTGCTTTCTCTGATCTGAATGAAATTCTGCGTGGTCTTAGCGACTTTTCAAGTGTCAGTTCAGATAGGGAAAGGGTTAACTGGATGAATCGAAATTATGAAAATCTTTTCAGAGTTTCGAAATCTCTCTTCGGTAAATTTCG</genome_strand>
        <mrna_strand>GTTCTCAACCGTCCGGCTAGTCGGCCACCGTCGCTACCGGCAATGCGGAGGACCGGCGTGACTCCCTCAGTCTTTCTTCTCTTCCTCTTCTTCCTTCTTCTCTCTAAGCCACCACCTTGTTCCTCCTTTTCTTTCCCATTTTCCAACTACCACGCCGTCCTCTCTCTCTCGCATTCGCTGTTCTCCCGCGTTGCTAATCTCCGGGAAACTCGCGGAGACTACGATGGCGCTTCCCGAGCTCGATCTATTGCTAGAAAACTGGAGAATGGTATGGGTATTGGTTTCTGGAAAGTCATGTGGAACGTGGGTTGGGACTATGCTCGAAATTATGCTTGGAGAGATGCTACGTCGTTTGAAATGTTCGGTGCTTTCTCTGATCTGAATGAAATTCTGCGTGGTCTTAGCGACTTTTCAAGTGTCAGTTCAGATAGGGAAAGGGTTAAGTGGATGAATCGGAATTATGAAAATCTTTTCAGAGTTTCAAAATCTCTTTTTGGTAAATTTCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E375954" ref_strand="+" ref_description="SGN-E375954 [TUS-40-E16]">
      <seq>tcaaccggccggctagtcggcgaccgtcgttaccggcgatgcggagaaccgacgtgactccctcaatctttcttctcttactcttcttccttcttctctctaagccatcaccttgttcctccttttctttcccattttccaactaccaagccgtcttctctctttctcactcgctattctcccgcgtcgctaatctccggcaagctcgcggagactatgatggcgctgcccgagctcgatccattgctaaaaaactagagaatggtatgggtattggtttctggaaagtcatgtggaacgtgggttgggattatgctcgaaattatgcttggagagatgctacgtcatttgaaatattcggtgctttctctgatctgaatgaaattctgcgtggtcttagcgacttttcaagtgtcagttcagatagggaaagggttaactggatgaatcgaaattatgaaaatcttttcagagtttcgaaatctctcttcggtaaatttcggaaggtgtttcgacaaccaggtccgctgaaggaagtcatggagacacttcagaaggaagtattagaaggtgatttgcttaaggactgccttgaattgggttctactgatttgaagggcctgctcacagttttgaaggatatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="+" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="98091" stop="100972"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98391" g_stop="98911" g_length="521"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="521" r_length="521" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98912" i_stop="100549" i_length="1638">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="100550" g_stop="100672" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="522" r_stop="644" r_length="123" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="+" ref_id="SGN-E375954" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>644</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E375954" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98391" e_stop="98911"/>
          <exon e_start="100550" e_stop="100672"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAACCGGCCGGCTAGTCGGCGACCGTCGTTACCGGCGATGCGGAGAACCGACGTGACTCCCTCAATCTTTCTTCTCTTACTCTTCTTCCTTCTTCTCTCTAAGCCATCACCTTGTTCCTCCTTTTCTTTCCCATTTTCCAACTACCAAGCCGTCTTCTCTCTTTCTCACTCGCTATTCTCCCGCGTCGCTAATCTCCGGCAAGCTCGCGGAGACTATGATGGCGCTGCCCGAGCTCGATCCATTGCTAAAAAACTAGAGAATGGTATGGGTATTGGTTTCTGGAAAGTCATGTGGAACGTGGGTTGGGATTATGCTCGAAATTATGCTTGGAGAGATGCTACGTCATTTGAAATATTCGGTGCTTTCTCTGATCTGAATGAAATTCTGCGTGGTCTTAGCGACTTTTCAAGTGTCAGTTCAGATAGGGAAAGGGTTAACTGGATGAATCGAAATTATGAAAATCTTTTCAGAGTTTCGAAATCTCTCTTCGGTAAATTTCGGAAGGTGTTTCGACAACCAGTAAGTTTCTACTTTTATATTTTTAGGTTAATTAGTTGAACAGTATTGGCATATTTACATTCTACAGAGACATCCTTTCGACCACACTAATGGATAGAACTTAAATGTTTCTTGTGAATTGAGCACTATTAAGAAGAAGTTCTAGTTGGAAAGATTACAACTTTTTGTCTTGAATTCTTAAAGCGAAACTTATTTTCGGACAATTTGCTTTTGCTAAAGCGAAACTTATTTTGGACTGAGGGAGTAATGAGTATAGTAGAAGCAGCTCTGTATCTAGGTTCCAATGCCACCACTTTGATGTGCTAAATGTTAGGTGAAAGCTCTGCTGGTGTCTGATCAATCTTGGGTACAACTTATATGTGTAGCTACGCATTGTGCAAATTTGATGCCTCTGCTATAAGCCTGTAACTTCAGTTTAGAGATTGAATTCCATGCAATTGATTGAACTATAAATTTACAAACAAAATCCTTGAAAACAGTTAAAAATTAAAATGATAATGTTCTTTTACACACTGAGGAAATAATGGGAGGGTGACCATCATGGACACCAAACTAAGGAAGTTCTAACTTCATTGTATCGAAGTTATGTCTTATCGCACGGGCTTAGTGGTAGCATTTACAAAGTCTTTGATTACTTTATAAATAAAAGTTGCAAATTTGAAAGAGATATTATAGTTAATATTCTGAGACCAATCAAACAAACGACCAATGATTATTGTCAACAAAGCAAGAAGCATAGACTATAGACTCTCAGGATCAAGTGAGAACTTTGATAGGTATCTTGTCCTAGATATTGAATTGCTCATATAATTGATTGGCGTGAAGACTTACAAACCAAAACCAAAATAAAAATAAAAATGTAAAATGACAAAGTTATGCATATTTGGGAAACAAGAAATGGTAACCATAACCAAGGAAGTTCTCTAGGGTGTCGTAATCGGACAGGTAAAGTAATAAATTTGAAAGAGGAGAACATGGCTAACATGTTGGGACTTGGGAATGTGAAACTTAAATTTGACTGTTTTTGAAGATCAAAAGATCGTATTAGACAAGAAAGGAGTTTAGAGTTAAATTTTGCCCCTTCTTCATTCAGTTGTTCATCAAAAAGTTTTGAGGTTATTGATTGTTAGTTTACTGAAGATTGGTGCAATTTATCTCTCTATTTTGATCGAGATTTTTAATACACGGCCTGCCAATTCTTGGGCCTCCAAATTGGATGTTTCAAATTACTATAAGTAGGTCAAACCTGCAATAATAGTTGGTCAAATTTTCCATTCACCTCCAACTTGAATAATTAATACACTCTGGGAACATTCATCTTTAGCTATGTTGTATGCTTGAATTGATGCTCATATTGAGCACACAGTAAAATGGAACTAGTATGGGACATTATTAGTCTTGTCTTGAGCACACAGGAAACTCGACTAGTACGGGATACTGATGAAATTATCATATAAATGATTTTATGCTTATTTTTCCCCCTAAATCACCAAAACAGAGAATCATGAATATCTTAATTGGAGGTAAAAAAAAGGAAGTAGCATGGACCAGAACGCGAGGATGAAAACTGAATGTATGTCGACTCTGTTGTTGTGCACTTGGTCTATGTTTGTTTTTATTTTTTTTATTTTGAAGCAGGGTCCGCTGAAGGAAGTCATGGAGACACTTCAGAAGGAAGTATTAGAAGGTGATTTGCTTAAGGACTGCCTTGAATTGGGTTCTACTGATTTGAAGGGCCTGCTCACAGTTTTGAAGGATATT</genome_strand>
        <mrna_strand>TCAACCGGCCGGCTAGTCGGCGACCGTCGTTACCGGCGATGCGGAGAACCGACGTGACTCCCTCAATCTTTCTTCTCTTACTCTTCTTCCTTCTTCTCTCTAAGCCATCACCTTGTTCCTCCTTTTCTTTCCCATTTTCCAACTACCAAGCCGTCTTCTCTCTTTCTCACTCGCTATTCTCCCGCGTCGCTAATCTCCGGCAAGCTCGCGGAGACTATGATGGCGCTGCCCGAGCTCGATCCATTGCTAAAAAACTAGAGAATGGTATGGGTATTGGTTTCTGGAAAGTCATGTGGAACGTGGGTTGGGATTATGCTCGAAATTATGCTTGGAGAGATGCTACGTCATTTGAAATATTCGGTGCTTTCTCTGATCTGAATGAAATTCTGCGTGGTCTTAGCGACTTTTCAAGTGTCAGTTCAGATAGGGAAAGGGTTAACTGGATGAATCGAAATTATGAAAATCTTTTCAGAGTTTCGAAATCTCTCTTCGGTAAATTTCGGAAGGTGTTTCGACAACCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCCGCTGAAGGAAGTCATGGAGACACTTCAGAAGGAAGTATTAGAAGGTGATTTGCTTAAGGACTGCCTTGAATTGGGTTCTACTGATTTGAAGGGCCTGCTCACAGTTTTGAAGGATATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E319536" ref_strand="+" ref_description="SGN-E319536 [cTOB-15-I14]">
      <seq>tcaaccggccggctagtcggcgaccgtcgttaccggcgatgcggagaaccgacgtgactccctcaatctttcttctcttactcttcttccttcttctctctaagccatcaccttgttcctccttttctttcccattttccaactaccaagccgtcttctctctttctcactcgctattctcccgcgtcgctaatctccggcaagctcgcggagactatgatggcgctgcccgagctcgatccattgctaaaaaactagagaatggtatgggtattggtttctggaaagtcatgtggaacgtgggttgggattatgctcgaaattatgcttggagagatgctacgtcatttgaaatattcggtgctttctctgatctgaatgaaattctgcgtggtcttagcgacttttcaagtgtcagttcagatagggaaagggttaactggatgaatcgaaattatgaaaatcttttcagagtttcgaaatctctcttcggtaaattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="+" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="98091" stop="99190"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98391" g_stop="98890" g_length="500"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="500" r_length="500" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="+" ref_id="SGN-E319536" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>500</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E319536" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98391" e_stop="98890"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAACCGGCCGGCTAGTCGGCGACCGTCGTTACCGGCGATGCGGAGAACCGACGTGACTCCCTCAATCTTTCTTCTCTTACTCTTCTTCCTTCTTCTCTCTAAGCCATCACCTTGTTCCTCCTTTTCTTTCCCATTTTCCAACTACCAAGCCGTCTTCTCTCTTTCTCACTCGCTATTCTCCCGCGTCGCTAATCTCCGGCAAGCTCGCGGAGACTATGATGGCGCTGCCCGAGCTCGATCCATTGCTAAAAAACTAGAGAATGGTATGGGTATTGGTTTCTGGAAAGTCATGTGGAACGTGGGTTGGGATTATGCTCGAAATTATGCTTGGAGAGATGCTACGTCATTTGAAATATTCGGTGCTTTCTCTGATCTGAATGAAATTCTGCGTGGTCTTAGCGACTTTTCAAGTGTCAGTTCAGATAGGGAAAGGGTTAACTGGATGAATCGAAATTATGAAAATCTTTTCAGAGTTTCGAAATCTCTCTTCGGTAAATTT</genome_strand>
        <mrna_strand>TCAACCGGCCGGCTAGTCGGCGACCGTCGTTACCGGCGATGCGGAGAACCGACGTGACTCCCTCAATCTTTCTTCTCTTACTCTTCTTCCTTCTTCTCTCTAAGCCATCACCTTGTTCCTCCTTTTCTTTCCCATTTTCCAACTACCAAGCCGTCTTCTCTCTTTCTCACTCGCTATTCTCCCGCGTCGCTAATCTCCGGCAAGCTCGCGGAGACTATGATGGCGCTGCCCGAGCTCGATCCATTGCTAAAAAACTAGAGAATGGTATGGGTATTGGTTTCTGGAAAGTCATGTGGAACGTGGGTTGGGATTATGCTCGAAATTATGCTTGGAGAGATGCTACGTCATTTGAAATATTCGGTGCTTTCTCTGATCTGAATGAAATTCTGCGTGGTCTTAGCGACTTTTCAAGTGTCAGTTCAGATAGGGAAAGGGTTAACTGGATGAATCGAAATTATGAAAATCTTTTCAGAGTTTCGAAATCTCTCTTCGGTAAATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E319443" ref_strand="+" ref_description="SGN-E319443 [cTOB-15-F14]">
      <seq>tcaaccggccggctagtcggcgaccgtcgttaccggcgatgcggagaaccgacgtgactccctcaatctttcttctcttactcttcttccttcttctctctaagccatcaccttgttcctccttttctttcccattttccaactaccaagccgtcttctctctttctcactcgctattctcccgcgtcgctaatctccggcaagctcgcggagactatgatggcgctgcccgagctcgatccattgctaaaaaactagagaatggtatgggtattggtttctggaaagtcatgtggaacgtgggttgggattatgctcgaaattatgcttggagagatgctacgtcatttgaaatattcggtgctttctctgatctgaatgaaattctgcgtggtcttagcgacttttcaagtgtcagttcagatagggaaagggttaactggatgaatcgaaattatgaaaatcttttcagagtttcgaaatctct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="+" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="98091" stop="99177"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98391" g_stop="98877" g_length="487"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="487" r_length="487" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="+" ref_id="SGN-E319443" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>487</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E319443" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98391" e_stop="98877"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAACCGGCCGGCTAGTCGGCGACCGTCGTTACCGGCGATGCGGAGAACCGACGTGACTCCCTCAATCTTTCTTCTCTTACTCTTCTTCCTTCTTCTCTCTAAGCCATCACCTTGTTCCTCCTTTTCTTTCCCATTTTCCAACTACCAAGCCGTCTTCTCTCTTTCTCACTCGCTATTCTCCCGCGTCGCTAATCTCCGGCAAGCTCGCGGAGACTATGATGGCGCTGCCCGAGCTCGATCCATTGCTAAAAAACTAGAGAATGGTATGGGTATTGGTTTCTGGAAAGTCATGTGGAACGTGGGTTGGGATTATGCTCGAAATTATGCTTGGAGAGATGCTACGTCATTTGAAATATTCGGTGCTTTCTCTGATCTGAATGAAATTCTGCGTGGTCTTAGCGACTTTTCAAGTGTCAGTTCAGATAGGGAAAGGGTTAACTGGATGAATCGAAATTATGAAAATCTTTTCAGAGTTTCGAAATCTCT</genome_strand>
        <mrna_strand>TCAACCGGCCGGCTAGTCGGCGACCGTCGTTACCGGCGATGCGGAGAACCGACGTGACTCCCTCAATCTTTCTTCTCTTACTCTTCTTCCTTCTTCTCTCTAAGCCATCACCTTGTTCCTCCTTTTCTTTCCCATTTTCCAACTACCAAGCCGTCTTCTCTCTTTCTCACTCGCTATTCTCCCGCGTCGCTAATCTCCGGCAAGCTCGCGGAGACTATGATGGCGCTGCCCGAGCTCGATCCATTGCTAAAAAACTAGAGAATGGTATGGGTATTGGTTTCTGGAAAGTCATGTGGAACGTGGGTTGGGATTATGCTCGAAATTATGCTTGGAGAGATGCTACGTCATTTGAAATATTCGGTGCTTTCTCTGATCTGAATGAAATTCTGCGTGGTCTTAGCGACTTTTCAAGTGTCAGTTCAGATAGGGAAAGGGTTAACTGGATGAATCGAAATTATGAAAATCTTTTCAGAGTTTCGAAATCTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E319345" ref_strand="+" ref_description="SGN-E319345 [cTOB-15-I13]">
      <seq>tcaaccggccggctagtcggcgaccgtcgttaccggcgatgcggagaaccgacgtgactccctcaatctttcttctcttactcttcttccttcttctctctaagccatcaccttgttcctccttttctttcccattttccaactaccaagccgtcttctctctttctcactcgctattctcccgcgtcgctaatctccggcaagctcgcggagactatgatggcgctgcccgagctcgatccattgctaaaaaactagagaatggtatgggtattggtttctggaaagtcatgtggaacgtgggttgggattatgctcgaaattatgcttggagagatgctacgtcatttgaaatattcggtgctttctctgatctgaatgaaattctgcgtggtcttagcgacttttcaagtgtcagttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="+" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="98091" stop="99111"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98391" g_stop="98811" g_length="421"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="421" r_length="421" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="+" ref_id="SGN-E319345" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>421</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E319345" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98391" e_stop="98811"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAACCGGCCGGCTAGTCGGCGACCGTCGTTACCGGCGATGCGGAGAACCGACGTGACTCCCTCAATCTTTCTTCTCTTACTCTTCTTCCTTCTTCTCTCTAAGCCATCACCTTGTTCCTCCTTTTCTTTCCCATTTTCCAACTACCAAGCCGTCTTCTCTCTTTCTCACTCGCTATTCTCCCGCGTCGCTAATCTCCGGCAAGCTCGCGGAGACTATGATGGCGCTGCCCGAGCTCGATCCATTGCTAAAAAACTAGAGAATGGTATGGGTATTGGTTTCTGGAAAGTCATGTGGAACGTGGGTTGGGATTATGCTCGAAATTATGCTTGGAGAGATGCTACGTCATTTGAAATATTCGGTGCTTTCTCTGATCTGAATGAAATTCTGCGTGGTCTTAGCGACTTTTCAAGTGTCAGTTC</genome_strand>
        <mrna_strand>TCAACCGGCCGGCTAGTCGGCGACCGTCGTTACCGGCGATGCGGAGAACCGACGTGACTCCCTCAATCTTTCTTCTCTTACTCTTCTTCCTTCTTCTCTCTAAGCCATCACCTTGTTCCTCCTTTTCTTTCCCATTTTCCAACTACCAAGCCGTCTTCTCTCTTTCTCACTCGCTATTCTCCCGCGTCGCTAATCTCCGGCAAGCTCGCGGAGACTATGATGGCGCTGCCCGAGCTCGATCCATTGCTAAAAAACTAGAGAATGGTATGGGTATTGGTTTCTGGAAAGTCATGTGGAACGTGGGTTGGGATTATGCTCGAAATTATGCTTGGAGAGATGCTACGTCATTTGAAATATTCGGTGCTTTCTCTGATCTGAATGAAATTCTGCGTGGTCTTAGCGACTTTTCAAGTGTCAGTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E709033" ref_strand="+" ref_description="SGN-E709033 [FA42CA04]">
      <seq>cgccggccggctagtcggcgaccgtcgttaccggcgatgcggagaaccgacgtgactccctcaatctttcttctcttactcttcttccttcttctctctaagccatcaccttgttcctccttttctttcccattttccaactaccaagccgtcttctctctttctcactcgctattctcccgcgtcgctaatctccggcaagctcgcggagactatgatggcgctgcccgagctcgatccattgctaaaaaactagagaatggtatgggtattggtttctggaaagtcatgtggaacgtgggttgggattatgctcgaaattatgcttggagagatgctacgtcatttgaaatattcggtgctttctctgatctgaatgaaattctgcgtggtcttagcgacttttcaagtgtcagttcagatagggaaagggttaactggatgaatcgaaattatgaaaatcttttcagagtttcgaaatctctcttcggtaaatttcggaaggtgtttcgacaaccaggtccgctgaaggaagtcatggagacacttcagaaggaagtattagaaggtgatttgcttaaggactgccttgaattgggttctactgatttgaagggcctgctcacagttttgaaggatatttcttcaaaatatacctctactttctcaacgcgagcagatctgtgactgagtgaagttgaaacccaggtattatggttaactctgtaacaagttttgttgctctacagtacagtactaacagaggtgtaaaagctcaatgtagaaaaagctgaattttttgtttcaggcttgtgtactttagtgacttgttgatccaacgtctaaaaatggacaagcctattaataagtttgactttgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="+" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="98095" stop="101213"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98393" g_stop="98911" g_length="519"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="519" r_length="519" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98912" i_stop="100549" i_length="1638">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="100550" g_stop="100913" g_length="364"/>
          <reference_exon_boundary r_type="cDNA" r_start="520" r_stop="881" r_length="362" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="+" ref_id="SGN-E709033" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>883</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E709033" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98393" e_stop="98911"/>
          <exon e_start="100550" e_stop="100913"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACCGGCCGGCTAGTCGGCGACCGTCGTTACCGGCGATGCGGAGAACCGACGTGACTCCCTCAATCTTTCTTCTCTTACTCTTCTTCCTTCTTCTCTCTAAGCCATCACCTTGTTCCTCCTTTTCTTTCCCATTTTCCAACTACCAAGCCGTCTTCTCTCTTTCTCACTCGCTATTCTCCCGCGTCGCTAATCTCCGGCAAGCTCGCGGAGACTATGATGGCGCTGCCCGAGCTCGATCCATTGCTAAAAAACTAGAGAATGGTATGGGTATTGGTTTCTGGAAAGTCATGTGGAACGTGGGTTGGGATTATGCTCGAAATTATGCTTGGAGAGATGCTACGTCATTTGAAATATTCGGTGCTTTCTCTGATCTGAATGAAATTCTGCGTGGTCTTAGCGACTTTTCAAGTGTCAGTTCAGATAGGGAAAGGGTTAACTGGATGAATCGAAATTATGAAAATCTTTTCAGAGTTTCGAAATCTCTCTTCGGTAAATTTCGGAAGGTGTTTCGACAACCAGTAAGTTTCTACTTTTATATTTTTAGGTTAATTAGTTGAACAGTATTGGCATATTTACATTCTACAGAGACATCCTTTCGACCACACTAATGGATAGAACTTAAATGTTTCTTGTGAATTGAGCACTATTAAGAAGAAGTTCTAGTTGGAAAGATTACAACTTTTTGTCTTGAATTCTTAAAGCGAAACTTATTTTCGGACAATTTGCTTTTGCTAAAGCGAAACTTATTTTGGACTGAGGGAGTAATGAGTATAGTAGAAGCAGCTCTGTATCTAGGTTCCAATGCCACCACTTTGATGTGCTAAATGTTAGGTGAAAGCTCTGCTGGTGTCTGATCAATCTTGGGTACAACTTATATGTGTAGCTACGCATTGTGCAAATTTGATGCCTCTGCTATAAGCCTGTAACTTCAGTTTAGAGATTGAATTCCATGCAATTGATTGAACTATAAATTTACAAACAAAATCCTTGAAAACAGTTAAAAATTAAAATGATAATGTTCTTTTACACACTGAGGAAATAATGGGAGGGTGACCATCATGGACACCAAACTAAGGAAGTTCTAACTTCATTGTATCGAAGTTATGTCTTATCGCACGGGCTTAGTGGTAGCATTTACAAAGTCTTTGATTACTTTATAAATAAAAGTTGCAAATTTGAAAGAGATATTATAGTTAATATTCTGAGACCAATCAAACAAACGACCAATGATTATTGTCAACAAAGCAAGAAGCATAGACTATAGACTCTCAGGATCAAGTGAGAACTTTGATAGGTATCTTGTCCTAGATATTGAATTGCTCATATAATTGATTGGCGTGAAGACTTACAAACCAAAACCAAAATAAAAATAAAAATGTAAAATGACAAAGTTATGCATATTTGGGAAACAAGAAATGGTAACCATAACCAAGGAAGTTCTCTAGGGTGTCGTAATCGGACAGGTAAAGTAATAAATTTGAAAGAGGAGAACATGGCTAACATGTTGGGACTTGGGAATGTGAAACTTAAATTTGACTGTTTTTGAAGATCAAAAGATCGTATTAGACAAGAAAGGAGTTTAGAGTTAAATTTTGCCCCTTCTTCATTCAGTTGTTCATCAAAAAGTTTTGAGGTTATTGATTGTTAGTTTACTGAAGATTGGTGCAATTTATCTCTCTATTTTGATCGAGATTTTTAATACACGGCCTGCCAATTCTTGGGCCTCCAAATTGGATGTTTCAAATTACTATAAGTAGGTCAAACCTGCAATAATAGTTGGTCAAATTTTCCATTCACCTCCAACTTGAATAATTAATACACTCTGGGAACATTCATCTTTAGCTATGTTGTATGCTTGAATTGATGCTCATATTGAGCACACAGTAAAATGGAACTAGTATGGGACATTATTAGTCTTGTCTTGAGCACACAGGAAACTCGACTAGTACGGGATACTGATGAAATTATCATATAAATGATTTTATGCTTATTTTTCCCCCTAAATCACCAAAACAGAGAATCATGAATATCTTAATTGGAGGTAAAAAAAAGGAAGTAGCATGGACCAGAACGCGAGGATGAAAACTGAATGTATGTCGACTCTGTTGTTGTGCACTTGGTCTATGTTTGTTTTTATTTTTTTTATTTTGAAGCAGGGTCCGCTGAAGGAAGTCATGGAGACACTTCAGAAGGAAGTATTAGAAGGTGATTTGCTTAAGGACTGCCTTGAATTGGGTTCTACTGATTTGAAGGGCCTGCTCACAGTTTTGAAGGATATTTCTTCAAAATATACCTCTACTTTCTCAACGCGAGCAGATCTGTGACTGAGTGAAGTTGAAACCAAGGTATTATGGTTAACTCTGTAACAAGTTTTGTTGCTCTACAGTACAGTACTAACAGAGGTGTAAAAGCTCAATGTAGAAGAAGCTGAATTTTTTGTTTCCAGGCTTGTGTACTTTAAGTGACTTGTTGATCAACGGTCTAAAAATGGACAAGCCTATTAATTAGTTTGACTTTGGA</genome_strand>
        <mrna_strand>CGCCGGCCGGCTAGTCGGCGACCGTCGTTACCGGCGATGCGGAGAACCGACGTGACTCCCTCAATCTTTCTTCTCTTACTCTTCTTCCTTCTTCTCTCTAAGCCATCACCTTGTTCCTCCTTTTCTTTCCCATTTTCCAACTACCAAGCCGTCTTCTCTCTTTCTCACTCGCTATTCTCCCGCGTCGCTAATCTCCGGCAAGCTCGCGGAGACTATGATGGCGCTGCCCGAGCTCGATCCATTGCTAAAAAACTAGAGAATGGTATGGGTATTGGTTTCTGGAAAGTCATGTGGAACGTGGGTTGGGATTATGCTCGAAATTATGCTTGGAGAGATGCTACGTCATTTGAAATATTCGGTGCTTTCTCTGATCTGAATGAAATTCTGCGTGGTCTTAGCGACTTTTCAAGTGTCAGTTCAGATAGGGAAAGGGTTAACTGGATGAATCGAAATTATGAAAATCTTTTCAGAGTTTCGAAATCTCTCTTCGGTAAATTTCGGAAGGTGTTTCGACAACCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCCGCTGAAGGAAGTCATGGAGACACTTCAGAAGGAAGTATTAGAAGGTGATTTGCTTAAGGACTGCCTTGAATTGGGTTCTACTGATTTGAAGGGCCTGCTCACAGTTTTGAAGGATATTTCTTCAAAATATACCTCTACTTTCTCAACGCGAGCAGATCTGTGACTGAGTGAAGTTGAAACCCAGGTATTATGGTTAACTCTGTAACAAGTTTTGTTGCTCTACAGTACAGTACTAACAGAGGTGTAAAAGCTCAATGTAGAAAAAGCTGAATTTTTTGTTT-CAGGCTTGTGTACTTT-AGTGACTTGTTGATCCAACGTCTAAAAATGGACAAGCCTATTAATAAGTTTGACTTTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E375953" ref_strand="+" ref_description="SGN-E375953 [TUS-40-E16](-)">
      <seq>aattctgcgtggtcttagcgacttttcaagtgtcagttcagatagggaaagggttaactggatgaatcgaaattatgaaaatcttttcagagtttcgaaatctctcttcggtaaatttcggaaggtgtttcgacaaccaggtccgctgaaggaagtcatggagacacttcagaaggaagtattagaaggtgatttgcttaaggactgccttgaattgggttctactgatttgaagggcctgctcacagttttgaaggatatttcttcaaaatatacctctactttctcaacgcgagcagatctgtgactgagtgaagttgaaaccaaggtattatggttaactctgtaacaagttttgttgctctacagtacagtactaacagaggtgtaaaagctcaatgtagaagaagctgaattttttgtttccaggcttgtgtactttaagtgacttgttgatcaacggtctaaaaatggacaagcctattaattagtttgactttggaaggttataaacatgtatacctagcatgtgctttatcataatgagagttttttttttttaatgttggatcttgggtgtactcttattttgacatttttcatggttgaaaaattatttattataaagacaatgcatttattaagttattaacgccaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="+" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="98473" stop="101372"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98773" g_stop="98911" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="139" r_length="139" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98912" i_stop="100549" i_length="1638">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="100550" g_stop="101075" g_length="526"/>
          <reference_exon_boundary r_type="cDNA" r_start="140" r_stop="665" r_length="526" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="+" ref_id="SGN-E375953" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>665</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E375953" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98773" e_stop="98911"/>
          <exon e_start="100550" e_stop="101075"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTCTGCGTGGTCTTAGCGACTTTTCAAGTGTCAGTTCAGATAGGGAAAGGGTTAACTGGATGAATCGAAATTATGAAAATCTTTTCAGAGTTTCGAAATCTCTCTTCGGTAAATTTCGGAAGGTGTTTCGACAACCAGTAAGTTTCTACTTTTATATTTTTAGGTTAATTAGTTGAACAGTATTGGCATATTTACATTCTACAGAGACATCCTTTCGACCACACTAATGGATAGAACTTAAATGTTTCTTGTGAATTGAGCACTATTAAGAAGAAGTTCTAGTTGGAAAGATTACAACTTTTTGTCTTGAATTCTTAAAGCGAAACTTATTTTCGGACAATTTGCTTTTGCTAAAGCGAAACTTATTTTGGACTGAGGGAGTAATGAGTATAGTAGAAGCAGCTCTGTATCTAGGTTCCAATGCCACCACTTTGATGTGCTAAATGTTAGGTGAAAGCTCTGCTGGTGTCTGATCAATCTTGGGTACAACTTATATGTGTAGCTACGCATTGTGCAAATTTGATGCCTCTGCTATAAGCCTGTAACTTCAGTTTAGAGATTGAATTCCATGCAATTGATTGAACTATAAATTTACAAACAAAATCCTTGAAAACAGTTAAAAATTAAAATGATAATGTTCTTTTACACACTGAGGAAATAATGGGAGGGTGACCATCATGGACACCAAACTAAGGAAGTTCTAACTTCATTGTATCGAAGTTATGTCTTATCGCACGGGCTTAGTGGTAGCATTTACAAAGTCTTTGATTACTTTATAAATAAAAGTTGCAAATTTGAAAGAGATATTATAGTTAATATTCTGAGACCAATCAAACAAACGACCAATGATTATTGTCAACAAAGCAAGAAGCATAGACTATAGACTCTCAGGATCAAGTGAGAACTTTGATAGGTATCTTGTCCTAGATATTGAATTGCTCATATAATTGATTGGCGTGAAGACTTACAAACCAAAACCAAAATAAAAATAAAAATGTAAAATGACAAAGTTATGCATATTTGGGAAACAAGAAATGGTAACCATAACCAAGGAAGTTCTCTAGGGTGTCGTAATCGGACAGGTAAAGTAATAAATTTGAAAGAGGAGAACATGGCTAACATGTTGGGACTTGGGAATGTGAAACTTAAATTTGACTGTTTTTGAAGATCAAAAGATCGTATTAGACAAGAAAGGAGTTTAGAGTTAAATTTTGCCCCTTCTTCATTCAGTTGTTCATCAAAAAGTTTTGAGGTTATTGATTGTTAGTTTACTGAAGATTGGTGCAATTTATCTCTCTATTTTGATCGAGATTTTTAATACACGGCCTGCCAATTCTTGGGCCTCCAAATTGGATGTTTCAAATTACTATAAGTAGGTCAAACCTGCAATAATAGTTGGTCAAATTTTCCATTCACCTCCAACTTGAATAATTAATACACTCTGGGAACATTCATCTTTAGCTATGTTGTATGCTTGAATTGATGCTCATATTGAGCACACAGTAAAATGGAACTAGTATGGGACATTATTAGTCTTGTCTTGAGCACACAGGAAACTCGACTAGTACGGGATACTGATGAAATTATCATATAAATGATTTTATGCTTATTTTTCCCCCTAAATCACCAAAACAGAGAATCATGAATATCTTAATTGGAGGTAAAAAAAAGGAAGTAGCATGGACCAGAACGCGAGGATGAAAACTGAATGTATGTCGACTCTGTTGTTGTGCACTTGGTCTATGTTTGTTTTTATTTTTTTTATTTTGAAGCAGGGTCCGCTGAAGGAAGTCATGGAGACACTTCAGAAGGAAGTATTAGAAGGTGATTTGCTTAAGGACTGCCTTGAATTGGGTTCTACTGATTTGAAGGGCCTGCTCACAGTTTTGAAGGATATTTCTTCAAAATATACCTCTACTTTCTCAACGCGAGCAGATCTGTGACTGAGTGAAGTTGAAACCAAGGTATTATGGTTAACTCTGTAACAAGTTTTGTTGCTCTACAGTACAGTACTAACAGAGGTGTAAAAGCTCAATGTAGAAGAAGCTGAATTTTTTGTTTCCAGGCTTGTGTACTTTAAGTGACTTGTTGATCAACGGTCTAAAAATGGACAAGCCTATTAATTAGTTTGACTTTGGAAGGTTATAAACATGTATACCTAGCATGTGCTTTATCATAATGAGAGTTTTTTTTTTTTAATGTTGGATCTTGGGTGTACTCTTATTTTGACATTTTTCATGGTTGAAAAATTATTTATTATAAAGACAATGCATTTATTAAGTTATTAACGCCATGAAAGGA</genome_strand>
        <mrna_strand>AATTCTGCGTGGTCTTAGCGACTTTTCAAGTGTCAGTTCAGATAGGGAAAGGGTTAACTGGATGAATCGAAATTATGAAAATCTTTTCAGAGTTTCGAAATCTCTCTTCGGTAAATTTCGGAAGGTGTTTCGACAACCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCCGCTGAAGGAAGTCATGGAGACACTTCAGAAGGAAGTATTAGAAGGTGATTTGCTTAAGGACTGCCTTGAATTGGGTTCTACTGATTTGAAGGGCCTGCTCACAGTTTTGAAGGATATTTCTTCAAAATATACCTCTACTTTCTCAACGCGAGCAGATCTGTGACTGAGTGAAGTTGAAACCAAGGTATTATGGTTAACTCTGTAACAAGTTTTGTTGCTCTACAGTACAGTACTAACAGAGGTGTAAAAGCTCAATGTAGAAGAAGCTGAATTTTTTGTTTCCAGGCTTGTGTACTTTAAGTGACTTGTTGATCAACGGTCTAAAAATGGACAAGCCTATTAATTAGTTTGACTTTGGAAGGTTATAAACATGTATACCTAGCATGTGCTTTATCATAATGAGAGTTTTTTTTTTTTAATGTTGGATCTTGGGTGTACTCTTATTTTGACATTTTTCATGGTTGAAAAATTATTTATTATAAAGACAATGCATTTATTAAGTTATTAACGCCAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E326811" ref_strand="+" ref_description="SGN-E326811 [cTOC-25-A23]">
      <seq>cataatctgtaatagaggaagcaatgaatgccgtatatagtcaccacctaaaaaaaaaaaaaaaaaactcgagactagttctctggtgaagtaaagaggagatggatagtggtgtatgtagtggtagttttaggattgaatttgggggtaaatgtaaatgcacaacaagtgccttgttattttatatttggtgattcattagtggataatgggaataacaacaatattcagtcattggctagggctaattacttgccttatggtattgattatcctgatggtccaactggaaggttttccaatggaaaaacaactgttgatgtcattgctgagcttttggggttcgatgattatattccaccctatgcatctgcaaggggtgaagacattctcaaaggtgttaattttgcatctgctgctgctggaattagagaagaaactggtcaacaattgggagcaaggattacgtttggtggtcaggtaaataattacaggaacacagtgcaacaagtggtgcaaatacttggagatgaaaattctgctgctaattatttgagcaaatgcatttactcaattggattangcagcaatgattatctncataattatttcatgcctncatattactccactagcagacaatttaatcctgatcaatatgctgatgttctaattcaacatact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="+" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="12904" stop="105066"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="103084" g_stop="103142" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="57" r_length="57" r_score="0.559"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="103143" i_stop="103325" i_length="183">
            <donor d_prob="0.000" d_score="0.58"/>
            <acceptor a_prob="0.931" a_score="0.58"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="103326" g_stop="103597" g_length="272"/>
          <reference_exon_boundary r_type="cDNA" r_start="58" r_stop="328" r_length="271" r_score="0.923"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="103598" i_stop="104283" i_length="686">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="104284" g_stop="104408" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="329" r_stop="453" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="104409" i_stop="104534" i_length="126">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="104535" g_stop="104766" g_length="232"/>
          <reference_exon_boundary r_type="cDNA" r_start="454" r_stop="684" r_length="231" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="+" ref_id="SGN-E326811" ref_strand="+">
        <total_alignment_score>0.923</total_alignment_score>
        <cumulative_length_of_scored_exons>688</cumulative_length_of_scored_exons>
        <coverage percentage="1.006" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E326811" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="103084" e_stop="103142"/>
          <exon e_start="103326" e_stop="103597"/>
          <exon e_start="104284" e_stop="104408"/>
          <exon e_start="104535" e_stop="104766"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATGAATTATATAAATGGATTCTATAACTGCTCACATTATCTCAGCCGCGTGAAAATAAATGCATTCAACTAACTTCTCATCAATGAATTGAAGTCTTCGTCACACTCTCTAAAATGACTAGCTCATTAACCTCAAAACACATAATATAGTATACTATATAATTAGACAATTGTTTGAAACTTTTCTTCAAGCTACTCAATTTTCCACTAGTATACTATACATTTTTTTTCTTCCCCCTTAGCTTCTTTTTGTTTGATGAAATGGGTGCTGGGGAAGTAAAGAGGAGATGGATAGTGGTGTATGTAGTGGTAGTTTTAGGATTGAATTTGGGGGTAAATGTAAATGCACAACAAGTGCCTTGTTATTTTATATTTGGTGATTCATTAGTGGATAATGGGAATAACAACAATATTCAGTCATTGGCTAGGGCTAATTACTTGCCTTATGGTATTGATTATCCTGATGGTCCAACTGGAAGGTTTTCCAATGGAAAAACAACTGTTGATGTCATTGGTTAGTATCTCATCTCACTTAAAAGTATTCTAATGTGTGTTATACTTTCTCTGTTTCAACTTATGTGACATGCACTATTTGATTTGATATAAAATTTAAAAAAGAAAAAAGGTTTTCTGAATTTTGTGATCTAGAACCTTAGACATTTGTGTAACATATATACTCTCTGTCCTTATTTATTTGTCCACTTTAAAAATGATACACCTATTAAAACAACAATGATTAGCACAGTTAAGTTATCATTTTACCCTTATTAAGTATGATTTCAAAAATAATGAATTAAAACTTTAAAAAATTCAAGAAGTTTAAATGAGGGTATAATATATATTTTTTTGTCATTTCTTGATTTGTCAAAATAGACAAGTAAATAGAAACAGCTAAAAGAGAAAATATGAACAAATAAATGAATGTAGCTTCTAATTATAATAAAATGACATGTTTAAGGGAGGACTAAAAAAGAAAGACGTGACACATAAATTGACGGCAAAGGTGTGTATAACATCTTATTACTTGAGTAGAGTTGATGACAACTTAAAGGACTATATATGCATTTTCCTAGAAAAGAAAGGTATAATTCGACATATCTTTTCATTTTTTTAAAAATTAGTAACATAAGTGATCAAAATGGTAATTAATAGTGATCAAAACTTAATATAAATATTGAATATGTTTAAACTAATTTACAGCTGAGCTTTTGGGGTTCGATGATTATATTCCACCCTATGCATCTGCAAGGGGTGAAGACATTCTCAAAGGTGTTAATTTTGCATCTGCTGCTGCTGGAATTAGAGAAGAAACTGGTCAACAATTGGTACTTACCGTGTTCTTCGTTTTAATTCATTTGTCATACTTTCCCTTTTAGTCTGTCTTTTAACTTCTAATAACACGTTATATTCACATACTGTTGCTACTTTTTTCGTTCACAAAATATTTATAGGGAGCAAGGATTACGTTTGGTGGTCAGGTAAATAATTACAGGAACACAGTGCAACAAGTGGTGCAAATACTTGGAGATGAAAATTCTGCTGCTAATTATTTGAGCAAATGCATTTACTCAATTGGATTAGGCAGCAATGATTATCTCAATAATTATTTCATGCCTCAATATTACTCCACTAGCAGACAATTTAATCCTGATCAATATGCTGATGTTCTAATTCAACAATACT</genome_strand>
        <mrna_strand>CATAATCTGTAATAGAGGAAGCAATGAATGC-CGTATATAGTCA-CCACCTAAAAAAAA.......................................................................................................................................................................................AAAAAAAAAACTCGA-GACTAGTTCTCTGGTGAAGTAAAGAGGAGATGGATAGTGGTGTATGTAGTGGTAGTTTTAGGATTGAATTTGGGGGTAAATGTAAATGCACAACAAGTGCCTTGTTATTTTATATTTGGTGATTCATTAGTGGATAATGGGAATAACAACAATATTCAGTCATTGGCTAGGGCTAATTACTTGCCTTATGGTATTGATTATCCTGATGGTCCAACTGGAAGGTTTTCCAATGGAAAAACAACTGTTGATGTCATTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGCTTTTGGGGTTCGATGATTATATTCCACCCTATGCATCTGCAAGGGGTGAAGACATTCTCAAAGGTGTTAATTTTGCATCTGCTGCTGCTGGAATTAGAGAAGAAACTGGTCAACAATTG..............................................................................................................................GGAGCAAGGATTACGTTTGGTGGTCAGGTAAATAATTACAGGAACACAGTGCAACAAGTGGTGCAAATACTTGGAGATGAAAATTCTGCTGCTAATTATTTGAGCAAATGCATTTACTCAATTGGATTANGCAGCAATGATTATCTNCATAATTATTTCATGCCTNCATATTACTCCACTAGCAGACAATTTAATCCTGATCAATATGCTGATGTTCTAATTCAAC-ATACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E313458" ref_strand="+" ref_description="SGN-E313458 [cTOA-13-F3]">
      <seq>taacttctcatcaatgaattgaagtcttcgtcacactctctaaaatgactagctcattaacctcaaaacacataatatagtatactatataattagacaattgtttgaaacttttcttcaagctactcaattttccactagtatactatacattttttttcttcccccttagcttctttttgtttgatgaaatgggtgctggggaagtaaagaggagatggatagtggtgtatgtagtggtagttttaggattgaatttgggggtaaatgtaaatgcacaacaagtgccttgttattttatatttggtgattcattagtgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="+" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="102854" stop="103775"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="103154" g_stop="103475" g_length="322"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="322" r_length="322" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="+" ref_id="SGN-E313458" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>322</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E313458" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="103154" e_stop="103475"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAACTTCTCATCAATGAATTGAAGTCTTCGTCACACTCTCTAAAATGACTAGCTCATTAACCTCAAAACACATAATATAGTATACTATATAATTAGACAATTGTTTGAAACTTTTCTTCAAGCTACTCAATTTTCCACTAGTATACTATACATTTTTTTTCTTCCCCCTTAGCTTCTTTTTGTTTGATGAAATGGGTGCTGGGGAAGTAAAGAGGAGATGGATAGTGGTGTATGTAGTGGTAGTTTTAGGATTGAATTTGGGGGTAAATGTAAATGCACAACAAGTGCCTTGTTATTTTATATTTGGTGATTCATTAGTGGA</genome_strand>
        <mrna_strand>TAACTTCTCATCAATGAATTGAAGTCTTCGTCACACTCTCTAAAATGACTAGCTCATTAACCTCAAAACACATAATATAGTATACTATATAATTAGACAATTGTTTGAAACTTTTCTTCAAGCTACTCAATTTTCCACTAGTATACTATACATTTTTTTTCTTCCCCCTTAGCTTCTTTTTGTTTGATGAAATGGGTGCTGGGGAAGTAAAGAGGAGATGGATAGTGGTGTATGTAGTGGTAGTTTTAGGATTGAATTTGGGGGTAAATGTAAATGCACAACAAGTGCCTTGTTATTTTATATTTGGTGATTCATTAGTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E745205" ref_strand="+" ref_description="SGN-E745205 [GI|47105841]">
      <seq>gaagctactcaattttccactagtatactatacattttttttcttcccccttagcttctttttgtttgatgaaatgggtgctggggaagtaaagaggagatggatagtggtgtatgtagtggtagttttaggattgaatttgggggtaaatgtaaatgcacaacaagtgccttgttattttatatttggtgattcattagtggataatgggaataacaacaatattcagtcattggctagggctaattacttgccttatggtattgattatcctgatggtccaactggaaggttttccaatggaaaaacaactgttgatgtcattgctgagcttttggggttcgatgattatattccaccctatgcatctgcaaggggtgaagacattctcaaaggtgttaattttgcatctgctgctgctggaattagagaagaaactggtcaacaattgggagcaaggattacgtttggtggtcaggtaaataattacaggaacacagtgcaacaagtggtgcaaatacttggagatgaaaattctgctgctaattatttgagcaaatgcatttactcaattggattaggcagcaatgattatctcaataattatttcatgcctcaatattactccactagcagacaatttaatcctgatcaatatgctgatgttctaattcaacaatactctcaacaactaaagactttgtatgactatggagcaaggaagtttgtcttaattggagtgggccaaattggttgtagcccaaatgctctagcccaaaacagtcctgatggaagaacctgtgcagaaaatataaataatgcaaacaagttgttcaacaataggctaaagggtattgtggatgaattcaatggcaatacaccagatgcaaaattcatctacatcaatgcttatgatatcttccaagatttaattgacaatccctcagcatttggatttagagtaacgaatgctggatgttgtggagtaggaaggaataacgggcaaataacatgtcttccactacaaaatccttgccaaaatagagatgaatatgtattttgggatgcatttcatccaggtgaagctgcaaatatagttgttgggagaagatcatatagagctgaaagatcatcagatgcttatccttttgatattcagcgtttagctcaactatgaagataagagatgaagctaaaaatatatatatttttgtggaatttgtattattgtgttctatgatgtattatgagttgataataattaattttattatttgagaaatgttatggttataaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="+" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="102973" stop="105897"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="103272" g_stop="103597" g_length="326"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="326" r_length="326" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="103598" i_stop="104283" i_length="686">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="104284" g_stop="104408" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="327" r_stop="451" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="104409" i_stop="104534" i_length="126">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="104535" g_stop="104780" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="452" r_stop="697" r_length="246" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="104781" i_stop="104899" i_length="119">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.886" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="104900" g_stop="105155" g_length="256"/>
          <reference_exon_boundary r_type="cDNA" r_start="698" r_stop="953" r_length="256" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="105156" i_stop="105249" i_length="94">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="105250" g_stop="105589" g_length="340"/>
          <reference_exon_boundary r_type="cDNA" r_start="954" r_stop="1293" r_length="340" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1295" polyA_stop="1314"/>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="+" ref_id="SGN-E745205" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1293</cumulative_length_of_scored_exons>
        <coverage percentage="0.984" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E745205" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="103272" e_stop="103597"/>
          <exon e_start="104284" e_stop="104408"/>
          <exon e_start="104535" e_stop="104780"/>
          <exon e_start="104900" e_stop="105155"/>
          <exon e_start="105250" e_stop="105589"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAGCTACTCAATTTTCCACTAGTATACTATACATTTTTTTTCTTCCCCCTTAGCTTCTTTTTGTTTGATGAAATGGGTGCTGGGGAAGTAAAGAGGAGATGGATAGTGGTGTATGTAGTGGTAGTTTTAGGATTGAATTTGGGGGTAAATGTAAATGCACAACAAGTGCCTTGTTATTTTATATTTGGTGATTCATTAGTGGATAATGGGAATAACAACAATATTCAGTCATTGGCTAGGGCTAATTACTTGCCTTATGGTATTGATTATCCTGATGGTCCAACTGGAAGGTTTTCCAATGGAAAAACAACTGTTGATGTCATTGGTTAGTATCTCATCTCACTTAAAAGTATTCTAATGTGTGTTATACTTTCTCTGTTTCAACTTATGTGACATGCACTATTTGATTTGATATAAAATTTAAAAAAGAAAAAAGGTTTTCTGAATTTTGTGATCTAGAACCTTAGACATTTGTGTAACATATATACTCTCTGTCCTTATTTATTTGTCCACTTTAAAAATGATACACCTATTAAAACAACAATGATTAGCACAGTTAAGTTATCATTTTACCCTTATTAAGTATGATTTCAAAAATAATGAATTAAAACTTTAAAAAATTCAAGAAGTTTAAATGAGGGTATAATATATATTTTTTTGTCATTTCTTGATTTGTCAAAATAGACAAGTAAATAGAAACAGCTAAAAGAGAAAATATGAACAAATAAATGAATGTAGCTTCTAATTATAATAAAATGACATGTTTAAGGGAGGACTAAAAAAGAAAGACGTGACACATAAATTGACGGCAAAGGTGTGTATAACATCTTATTACTTGAGTAGAGTTGATGACAACTTAAAGGACTATATATGCATTTTCCTAGAAAAGAAAGGTATAATTCGACATATCTTTTCATTTTTTTAAAAATTAGTAACATAAGTGATCAAAATGGTAATTAATAGTGATCAAAACTTAATATAAATATTGAATATGTTTAAACTAATTTACAGCTGAGCTTTTGGGGTTCGATGATTATATTCCACCCTATGCATCTGCAAGGGGTGAAGACATTCTCAAAGGTGTTAATTTTGCATCTGCTGCTGCTGGAATTAGAGAAGAAACTGGTCAACAATTGGTACTTACCGTGTTCTTCGTTTTAATTCATTTGTCATACTTTCCCTTTTAGTCTGTCTTTTAACTTCTAATAACACGTTATATTCACATACTGTTGCTACTTTTTTCGTTCACAAAATATTTATAGGGAGCAAGGATTACGTTTGGTGGTCAGGTAAATAATTACAGGAACACAGTGCAACAAGTGGTGCAAATACTTGGAGATGAAAATTCTGCTGCTAATTATTTGAGCAAATGCATTTACTCAATTGGATTAGGCAGCAATGATTATCTCAATAATTATTTCATGCCTCAATATTACTCCACTAGCAGACAATTTAATCCTGATCAATATGCTGATGTTCTAATTCAACAATACTCTCAACAACTAAAGGTGAGTTTGAATCACCTGATTAAAAGTAATCGATAAACATATAACATGTTTAAAGTAAAGTACTTGCGTTTTAATATTAGAGATAATATCATAAAAGATCTAATTGGCTTTTACATCAGACTTTGTATGACTATGGAGCAAGGAAGTTTGTCTTAATTGGAGTGGGCCAAATTGGTTGTAGCCCAAATGCTCTAGCCCAAAACAGTCCTGATGGAAGAACCTGTGCAGAAAATATAAATAATGCAAACAAGTTGTTCAACAATAGGCTAAAGGGTATTGTGGATGAATTCAATGGCAATACACCAGATGCAAAATTCATCTACATCAATGCTTATGATATCTTCCAAGATTTAATTGACAATCCCTCAGCATTTGGTAAATATTTCTTTCTCATGCGAGTCATTTTTTTTTAATAAACAGACTTAAAAAAAAATAGTATTGACAAACTTGACTTTTTGACAATGTTCAGGATTTAGAGTAACGAATGCTGGATGTTGTGGAGTAGGAAGGAATAACGGGCAAATAACATGTCTTCCACTACAAAATCCTTGCCAAAATAGAGATGAATATGTATTTTGGGATGCATTTCATCCAGGTGAAGCTGCAAATATAGTTGTTGGGAGAAGATCATATAGAGCTGAAAGATCATCAGATGCTTATCCTTTTGATATTCAGCGTTTAGCTCAACTATGAAGATAAGAGATGAAGCTAAAAATATATATATTTTTGTGGAATTTGTATTATTGTGTTCTATGATGTATTATGAGTTGATAATAATTAATTTTATTATTTGAGAAATGTTATGGTTA</genome_strand>
        <mrna_strand>GAAGCTACTCAATTTTCCACTAGTATACTATACATTTTTTTTCTTCCCCCTTAGCTTCTTTTTGTTTGATGAAATGGGTGCTGGGGAAGTAAAGAGGAGATGGATAGTGGTGTATGTAGTGGTAGTTTTAGGATTGAATTTGGGGGTAAATGTAAATGCACAACAAGTGCCTTGTTATTTTATATTTGGTGATTCATTAGTGGATAATGGGAATAACAACAATATTCAGTCATTGGCTAGGGCTAATTACTTGCCTTATGGTATTGATTATCCTGATGGTCCAACTGGAAGGTTTTCCAATGGAAAAACAACTGTTGATGTCATTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGCTTTTGGGGTTCGATGATTATATTCCACCCTATGCATCTGCAAGGGGTGAAGACATTCTCAAAGGTGTTAATTTTGCATCTGCTGCTGCTGGAATTAGAGAAGAAACTGGTCAACAATTG..............................................................................................................................GGAGCAAGGATTACGTTTGGTGGTCAGGTAAATAATTACAGGAACACAGTGCAACAAGTGGTGCAAATACTTGGAGATGAAAATTCTGCTGCTAATTATTTGAGCAAATGCATTTACTCAATTGGATTAGGCAGCAATGATTATCTCAATAATTATTTCATGCCTCAATATTACTCCACTAGCAGACAATTTAATCCTGATCAATATGCTGATGTTCTAATTCAACAATACTCTCAACAACTAAAG.......................................................................................................................ACTTTGTATGACTATGGAGCAAGGAAGTTTGTCTTAATTGGAGTGGGCCAAATTGGTTGTAGCCCAAATGCTCTAGCCCAAAACAGTCCTGATGGAAGAACCTGTGCAGAAAATATAAATAATGCAAACAAGTTGTTCAACAATAGGCTAAAGGGTATTGTGGATGAATTCAATGGCAATACACCAGATGCAAAATTCATCTACATCAATGCTTATGATATCTTCCAAGATTTAATTGACAATCCCTCAGCATTTG..............................................................................................GATTTAGAGTAACGAATGCTGGATGTTGTGGAGTAGGAAGGAATAACGGGCAAATAACATGTCTTCCACTACAAAATCCTTGCCAAAATAGAGATGAATATGTATTTTGGGATGCATTTCATCCAGGTGAAGCTGCAAATATAGTTGTTGGGAGAAGATCATATAGAGCTGAAAGATCATCAGATGCTTATCCTTTTGATATTCAGCGTTTAGCTCAACTATGAAGATAAGAGATGAAGCTAAAAATATATATATTTTTGTGGAATTTGTATTATTGTGTTCTATGATGTATTATGAGTTGATAATAATTAATTTTATTATTTGAGAAATGTTATGGTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E723532" ref_strand="+" ref_description="SGN-E723532 [FC20DB11]">
      <seq>ggcgaattggcggccaatcggccgaattgaagctactcaattttccactagtatactatacattttttttcttcccccttagcttctttttgtttgatgaaatgggtgctggggaagtaaagaggagatggatagtggtgtatgtagtggtagttttaggattgaatttgggggtaaatgtaaatgcacaacaagtgccttgttattttatatttggtgattcattagtggataatgggaataacaacaatattcagtcattggctagggctaattacttgccttatggtattgattatcctgatggtccaactggaaggttttccaatggaaaaacaactgttgatgtcattgctgagcttttggggttcgatgattatattccaccctatgcatctgcaaggggtgaagacattctcaaaggtgttaattttgcatctgctgctgctggaattagagaagaaactggtcaacaattgggagcaaggattacgtttggtggtcaggtaaataattacaggaacacagtgcaacaagtggtgcaaatacttggagatgaaaattctgctgctaattatttgagcaaatgcatttactcaattggattaggcagcaatgattatctcaataattatttcatgcctcaatattactccactagcagacaatttaatcctgatcaatatgctgatgttctaattcaacaatactctcaacaactaaagactttgtatgactatggagcaaggaagtttgtct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="+" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="102970" stop="105233"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="103276" g_stop="103597" g_length="322"/>
          <reference_exon_boundary r_type="cDNA" r_start="33" r_stop="354" r_length="322" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="103598" i_stop="104283" i_length="686">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="104284" g_stop="104408" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="355" r_stop="479" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="104409" i_stop="104534" i_length="126">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="104535" g_stop="104780" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="480" r_stop="725" r_length="246" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="104781" i_stop="104899" i_length="119">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.886" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="104900" g_stop="104933" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="726" r_stop="759" r_length="34" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="+" ref_id="SGN-E723532" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>727</cumulative_length_of_scored_exons>
        <coverage percentage="0.958" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E723532" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="103276" e_stop="103597"/>
          <exon e_start="104284" e_stop="104408"/>
          <exon e_start="104535" e_stop="104780"/>
          <exon e_start="104900" e_stop="104933"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTACTCAATTTTCCACTAGTATACTATACATTTTTTTTCTTCCCCCTTAGCTTCTTTTTGTTTGATGAAATGGGTGCTGGGGAAGTAAAGAGGAGATGGATAGTGGTGTATGTAGTGGTAGTTTTAGGATTGAATTTGGGGGTAAATGTAAATGCACAACAAGTGCCTTGTTATTTTATATTTGGTGATTCATTAGTGGATAATGGGAATAACAACAATATTCAGTCATTGGCTAGGGCTAATTACTTGCCTTATGGTATTGATTATCCTGATGGTCCAACTGGAAGGTTTTCCAATGGAAAAACAACTGTTGATGTCATTGGTTAGTATCTCATCTCACTTAAAAGTATTCTAATGTGTGTTATACTTTCTCTGTTTCAACTTATGTGACATGCACTATTTGATTTGATATAAAATTTAAAAAAGAAAAAAGGTTTTCTGAATTTTGTGATCTAGAACCTTAGACATTTGTGTAACATATATACTCTCTGTCCTTATTTATTTGTCCACTTTAAAAATGATACACCTATTAAAACAACAATGATTAGCACAGTTAAGTTATCATTTTACCCTTATTAAGTATGATTTCAAAAATAATGAATTAAAACTTTAAAAAATTCAAGAAGTTTAAATGAGGGTATAATATATATTTTTTTGTCATTTCTTGATTTGTCAAAATAGACAAGTAAATAGAAACAGCTAAAAGAGAAAATATGAACAAATAAATGAATGTAGCTTCTAATTATAATAAAATGACATGTTTAAGGGAGGACTAAAAAAGAAAGACGTGACACATAAATTGACGGCAAAGGTGTGTATAACATCTTATTACTTGAGTAGAGTTGATGACAACTTAAAGGACTATATATGCATTTTCCTAGAAAAGAAAGGTATAATTCGACATATCTTTTCATTTTTTTAAAAATTAGTAACATAAGTGATCAAAATGGTAATTAATAGTGATCAAAACTTAATATAAATATTGAATATGTTTAAACTAATTTACAGCTGAGCTTTTGGGGTTCGATGATTATATTCCACCCTATGCATCTGCAAGGGGTGAAGACATTCTCAAAGGTGTTAATTTTGCATCTGCTGCTGCTGGAATTAGAGAAGAAACTGGTCAACAATTGGTACTTACCGTGTTCTTCGTTTTAATTCATTTGTCATACTTTCCCTTTTAGTCTGTCTTTTAACTTCTAATAACACGTTATATTCACATACTGTTGCTACTTTTTTCGTTCACAAAATATTTATAGGGAGCAAGGATTACGTTTGGTGGTCAGGTAAATAATTACAGGAACACAGTGCAACAAGTGGTGCAAATACTTGGAGATGAAAATTCTGCTGCTAATTATTTGAGCAAATGCATTTACTCAATTGGATTAGGCAGCAATGATTATCTCAATAATTATTTCATGCCTCAATATTACTCCACTAGCAGACAATTTAATCCTGATCAATATGCTGATGTTCTAATTCAACAATACTCTCAACAACTAAAGGTGAGTTTGAATCACCTGATTAAAAGTAATCGATAAACATATAACATGTTTAAAGTAAAGTACTTGCGTTTTAATATTAGAGATAATATCATAAAAGATCTAATTGGCTTTTACATCAGACTTTGTATGACTATGGAGCAAGGAAGTTTGTCT</genome_strand>
        <mrna_strand>CTACTCAATTTTCCACTAGTATACTATACATTTTTTTTCTTCCCCCTTAGCTTCTTTTTGTTTGATGAAATGGGTGCTGGGGAAGTAAAGAGGAGATGGATAGTGGTGTATGTAGTGGTAGTTTTAGGATTGAATTTGGGGGTAAATGTAAATGCACAACAAGTGCCTTGTTATTTTATATTTGGTGATTCATTAGTGGATAATGGGAATAACAACAATATTCAGTCATTGGCTAGGGCTAATTACTTGCCTTATGGTATTGATTATCCTGATGGTCCAACTGGAAGGTTTTCCAATGGAAAAACAACTGTTGATGTCATTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGCTTTTGGGGTTCGATGATTATATTCCACCCTATGCATCTGCAAGGGGTGAAGACATTCTCAAAGGTGTTAATTTTGCATCTGCTGCTGCTGGAATTAGAGAAGAAACTGGTCAACAATTG..............................................................................................................................GGAGCAAGGATTACGTTTGGTGGTCAGGTAAATAATTACAGGAACACAGTGCAACAAGTGGTGCAAATACTTGGAGATGAAAATTCTGCTGCTAATTATTTGAGCAAATGCATTTACTCAATTGGATTAGGCAGCAATGATTATCTCAATAATTATTTCATGCCTCAATATTACTCCACTAGCAGACAATTTAATCCTGATCAATATGCTGATGTTCTAATTCAACAATACTCTCAACAACTAAAG.......................................................................................................................ACTTTGTATGACTATGGAGCAAGGAAGTTTGTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E347345" ref_strand="+" ref_description="SGN-E347345 [cTOF-33-J3]">
      <seq>tcaattttccactagtatactatacattttttttcttcccccttagcttctttttgtttgatgaaatgggtgctggggaagtaaagaggagatggatagtggtgtatgtagtggtagttttaggattgaatttgggggtaaatgtaaatgcacaacaagtgccttgttattttatatttggtgattcattagtggataatgggaataacaacaatattcagtcattggctagggctaattacttgccttatggtattgattatcctgatggtccaactggaaggttttccaatggaaaaacaactgttgatgtcattgctgagcttttggggttcgatgattatattccaccctatgcatctgcaaggggtgaagacattctcaaaggtgttaattttgcatctgctgctgctggaattagagaagaaactggtcaacaattgggagcaaggattacgtttggtggtcaggtaaataattacaggaacacagtgcaacaagtggtgcaaatacttggagatgaaaattctgctgctaattatttgagcaaatgcatttactcaattggattaggcagcaatgattatctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="+" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="102980" stop="104981"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="103280" g_stop="103597" g_length="318"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="318" r_length="318" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="103598" i_stop="104283" i_length="686">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="104284" g_stop="104408" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="319" r_stop="443" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="104409" i_stop="104534" i_length="126">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="104535" g_stop="104681" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="444" r_stop="590" r_length="147" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="+" ref_id="SGN-E347345" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>590</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E347345" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="103280" e_stop="103597"/>
          <exon e_start="104284" e_stop="104408"/>
          <exon e_start="104535" e_stop="104681"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAATTTTCCACTAGTATACTATACATTTTTTTTCTTCCCCCTTAGCTTCTTTTTGTTTGATGAAATGGGTGCTGGGGAAGTAAAGAGGAGATGGATAGTGGTGTATGTAGTGGTAGTTTTAGGATTGAATTTGGGGGTAAATGTAAATGCACAACAAGTGCCTTGTTATTTTATATTTGGTGATTCATTAGTGGATAATGGGAATAACAACAATATTCAGTCATTGGCTAGGGCTAATTACTTGCCTTATGGTATTGATTATCCTGATGGTCCAACTGGAAGGTTTTCCAATGGAAAAACAACTGTTGATGTCATTGGTTAGTATCTCATCTCACTTAAAAGTATTCTAATGTGTGTTATACTTTCTCTGTTTCAACTTATGTGACATGCACTATTTGATTTGATATAAAATTTAAAAAAGAAAAAAGGTTTTCTGAATTTTGTGATCTAGAACCTTAGACATTTGTGTAACATATATACTCTCTGTCCTTATTTATTTGTCCACTTTAAAAATGATACACCTATTAAAACAACAATGATTAGCACAGTTAAGTTATCATTTTACCCTTATTAAGTATGATTTCAAAAATAATGAATTAAAACTTTAAAAAATTCAAGAAGTTTAAATGAGGGTATAATATATATTTTTTTGTCATTTCTTGATTTGTCAAAATAGACAAGTAAATAGAAACAGCTAAAAGAGAAAATATGAACAAATAAATGAATGTAGCTTCTAATTATAATAAAATGACATGTTTAAGGGAGGACTAAAAAAGAAAGACGTGACACATAAATTGACGGCAAAGGTGTGTATAACATCTTATTACTTGAGTAGAGTTGATGACAACTTAAAGGACTATATATGCATTTTCCTAGAAAAGAAAGGTATAATTCGACATATCTTTTCATTTTTTTAAAAATTAGTAACATAAGTGATCAAAATGGTAATTAATAGTGATCAAAACTTAATATAAATATTGAATATGTTTAAACTAATTTACAGCTGAGCTTTTGGGGTTCGATGATTATATTCCACCCTATGCATCTGCAAGGGGTGAAGACATTCTCAAAGGTGTTAATTTTGCATCTGCTGCTGCTGGAATTAGAGAAGAAACTGGTCAACAATTGGTACTTACCGTGTTCTTCGTTTTAATTCATTTGTCATACTTTCCCTTTTAGTCTGTCTTTTAACTTCTAATAACACGTTATATTCACATACTGTTGCTACTTTTTTCGTTCACAAAATATTTATAGGGAGCAAGGATTACGTTTGGTGGTCAGGTAAATAATTACAGGAACACAGTGCAACAAGTGGTGCAAATACTTGGAGATGAAAATTCTGCTGCTAATTATTTGAGCAAATGCATTTACTCAATTGGATTAGGCAGCAATGATTATCTC</genome_strand>
        <mrna_strand>TCAATTTTCCACTAGTATACTATACATTTTTTTTCTTCCCCCTTAGCTTCTTTTTGTTTGATGAAATGGGTGCTGGGGAAGTAAAGAGGAGATGGATAGTGGTGTATGTAGTGGTAGTTTTAGGATTGAATTTGGGGGTAAATGTAAATGCACAACAAGTGCCTTGTTATTTTATATTTGGTGATTCATTAGTGGATAATGGGAATAACAACAATATTCAGTCATTGGCTAGGGCTAATTACTTGCCTTATGGTATTGATTATCCTGATGGTCCAACTGGAAGGTTTTCCAATGGAAAAACAACTGTTGATGTCATTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGCTTTTGGGGTTCGATGATTATATTCCACCCTATGCATCTGCAAGGGGTGAAGACATTCTCAAAGGTGTTAATTTTGCATCTGCTGCTGCTGGAATTAGAGAAGAAACTGGTCAACAATTG..............................................................................................................................GGAGCAAGGATTACGTTTGGTGGTCAGGTAAATAATTACAGGAACACAGTGCAACAAGTGGTGCAAATACTTGGAGATGAAAATTCTGCTGCTAATTATTTGAGCAAATGCATTTACTCAATTGGATTAGGCAGCAATGATTATCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E467535" ref_strand="+" ref_description="SGN-E467535 [cSTB-49-C16]">
      <seq>cactagtatagtacacactttttttcttcccccttagcttctttttgtttgatgataatgggtgcttggggagtaaagagatggatagtggtgtatgtagcggtacttttaggattgaatttggggataaatgtaaatgcacaacaagtgcctcgttattttatatttggtgattcattagtggataatgggaataacaacaatattcagtctttggctagggctaattacttgccttatggcattgattatcctgatggtgcaactgggaggctttccaatggcaaaactactgttgatgtcattgctgagcttttggggttcgatgattatattccaccctatgcatctgcaaggggtgaagacattctcaaaggtgataattatgcatctgctgcagctggaatcagagaagaaactggccaacaattgggagcaaggattacctttggtggtcaggtgaataattacaggagcacagcgcaacaagtggtgcaaatacttggagatgaaaattcagctgctaattatctgagcaagtgtatatactcaattggactgggcagcagcgattatctcaataattatttgatgccccaatattactccactagcagacaatgcaatcctgatcaatatgctgatgttctaattcaacaatacactc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="+" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="102989" stop="105069"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="103289" g_stop="103597" g_length="309"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="307" r_length="307" r_score="0.932"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="103598" i_stop="104283" i_length="686">
            <donor d_prob="1.000" d_score="0.90"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="104284" g_stop="104408" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="308" r_stop="432" r_length="125" r_score="0.960"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="104409" i_stop="104534" i_length="126">
            <donor d_prob="0.998" d_score="0.92"/>
            <acceptor a_prob="0.990" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="104535" g_stop="104769" g_length="235"/>
          <reference_exon_boundary r_type="cDNA" r_start="433" r_stop="667" r_length="235" r_score="0.923"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="+" ref_id="SGN-E467535" ref_strand="+">
        <total_alignment_score>0.934</total_alignment_score>
        <cumulative_length_of_scored_exons>669</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E467535" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="103289" e_stop="103597"/>
          <exon e_start="104284" e_stop="104408"/>
          <exon e_start="104535" e_stop="104769"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACTAGTATACTATACATTTTTTTTCTTCCCCCTTAGCTTCTTTTTGTTTGATGA-AATGGGTGCTGGGGAAGTAAAGAGGAGATGGATAGTGGTGTATGTAGTGGTAGTTTTAGGATTGAATTTGGGGGTAAATGTAAATGCACAACAAGTGCCTTGTTATTTTATATTTGGTGATTCATTAGTGGATAATGGGAATAACAACAATATTCAGTCATTGGCTAGGGCTAATTACTTGCCTTATGGTATTGATTATCCTGATGGTCCAACTGGAAGGTTTTCCAATGGAAAAACAACTGTTGATGTCATTGGTTAGTATCTCATCTCACTTAAAAGTATTCTAATGTGTGTTATACTTTCTCTGTTTCAACTTATGTGACATGCACTATTTGATTTGATATAAAATTTAAAAAAGAAAAAAGGTTTTCTGAATTTTGTGATCTAGAACCTTAGACATTTGTGTAACATATATACTCTCTGTCCTTATTTATTTGTCCACTTTAAAAATGATACACCTATTAAAACAACAATGATTAGCACAGTTAAGTTATCATTTTACCCTTATTAAGTATGATTTCAAAAATAATGAATTAAAACTTTAAAAAATTCAAGAAGTTTAAATGAGGGTATAATATATATTTTTTTGTCATTTCTTGATTTGTCAAAATAGACAAGTAAATAGAAACAGCTAAAAGAGAAAATATGAACAAATAAATGAATGTAGCTTCTAATTATAATAAAATGACATGTTTAAGGGAGGACTAAAAAAGAAAGACGTGACACATAAATTGACGGCAAAGGTGTGTATAACATCTTATTACTTGAGTAGAGTTGATGACAACTTAAAGGACTATATATGCATTTTCCTAGAAAAGAAAGGTATAATTCGACATATCTTTTCATTTTTTTAAAAATTAGTAACATAAGTGATCAAAATGGTAATTAATAGTGATCAAAACTTAATATAAATATTGAATATGTTTAAACTAATTTACAGCTGAGCTTTTGGGGTTCGATGATTATATTCCACCCTATGCATCTGCAAGGGGTGAAGACATTCTCAAAGGTGTTAATTTTGCATCTGCTGCTGCTGGAATTAGAGAAGAAACTGGTCAACAATTGGTACTTACCGTGTTCTTCGTTTTAATTCATTTGTCATACTTTCCCTTTTAGTCTGTCTTTTAACTTCTAATAACACGTTATATTCACATACTGTTGCTACTTTTTTCGTTCACAAAATATTTATAGGGAGCAAGGATTACGTTTGGTGGTCAGGTAAATAATTACAGGAACACAGTGCAACAAGTGGTGCAAATACTTGGAGATGAAAATTCTGCTGCTAATTATTTGAGCAAATGCATTTACTCAATTGGATTAGGCAGCAATGATTATCTCAATAATTATTTCATGCCTCAATATTACTCCACTAGCAGACAATTTAATCCTGATCAATATGCTGATGTTCTAATTCAACAATACTCTC</genome_strand>
        <mrna_strand>CACTAGTATAGTACACACTTTTTTTCTTCCCCCTTAGCTTCTTTTTGTTTGATGATAATGGGTGCTTGGGGAGT-AA-A-GAGATGGATAGTGGTGTATGTAGCGGTACTTTTAGGATTGAATTTGGGGATAAATGTAAATGCACAACAAGTGCCTCGTTATTTTATATTTGGTGATTCATTAGTGGATAATGGGAATAACAACAATATTCAGTCTTTGGCTAGGGCTAATTACTTGCCTTATGGCATTGATTATCCTGATGGTGCAACTGGGAGGCTTTCCAATGGCAAAACTACTGTTGATGTCATTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGCTTTTGGGGTTCGATGATTATATTCCACCCTATGCATCTGCAAGGGGTGAAGACATTCTCAAAGGTGATAATTATGCATCTGCTGCAGCTGGAATCAGAGAAGAAACTGGCCAACAATTG..............................................................................................................................GGAGCAAGGATTACCTTTGGTGGTCAGGTGAATAATTACAGGAGCACAGCGCAACAAGTGGTGCAAATACTTGGAGATGAAAATTCAGCTGCTAATTATCTGAGCAAGTGTATATACTCAATTGGACTGGGCAGCAGCGATTATCTCAATAATTATTTGATGCCCCAATATTACTCCACTAGCAGACAATGCAATCCTGATCAATATGCTGATGTTCTAATTCAACAATACACTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E347573" ref_strand="+" ref_description="SGN-E347573 [cTOF-26-I6]">
      <seq>actagtatactatacattttttttcttcccccttagcttctttttgtttgatgaaatgggtgctggggaagtaaagaggagatggatagtggtgtatgtagtggtagttttaggattgaatttgggggtaaatgtaaatgcacaacaagtgccttgttattttatatttggtgattcattagtggataatgggaataacaacaatattcagtcattggctagggctaattacttgccttatggtattgattatcctgatggtccaactggaaggttttccaatggaaaaacaactgttgatgtcattgctgagcttttggggttcgatgattatattccaccctatgcatctgcaaggggtgaagacattctcaaaggtgttaattttgcatctgctgctgctggaattagagaagaaactggtcaacaattgggagcaaggattacgtttggtggtcaggtaaataattacaggaacacagtgcaacaagtggtgcaaatacttggagatgaaaattctgctgctaattatttgagcaaatgcatttactcaattggattangcagcaatgattatctcaataattatttcatgcctcaatattactccactagcagacaatttaatcctgatcaatatgctgatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="+" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="102990" stop="105049"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="103290" g_stop="103597" g_length="308"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="308" r_length="308" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="103598" i_stop="104283" i_length="686">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="104284" g_stop="104408" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="309" r_stop="433" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="104409" i_stop="104534" i_length="126">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="104535" g_stop="104749" g_length="215"/>
          <reference_exon_boundary r_type="cDNA" r_start="434" r_stop="648" r_length="215" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="+" ref_id="SGN-E347573" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>648</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E347573" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="103290" e_stop="103597"/>
          <exon e_start="104284" e_stop="104408"/>
          <exon e_start="104535" e_stop="104749"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTAGTATACTATACATTTTTTTTCTTCCCCCTTAGCTTCTTTTTGTTTGATGAAATGGGTGCTGGGGAAGTAAAGAGGAGATGGATAGTGGTGTATGTAGTGGTAGTTTTAGGATTGAATTTGGGGGTAAATGTAAATGCACAACAAGTGCCTTGTTATTTTATATTTGGTGATTCATTAGTGGATAATGGGAATAACAACAATATTCAGTCATTGGCTAGGGCTAATTACTTGCCTTATGGTATTGATTATCCTGATGGTCCAACTGGAAGGTTTTCCAATGGAAAAACAACTGTTGATGTCATTGGTTAGTATCTCATCTCACTTAAAAGTATTCTAATGTGTGTTATACTTTCTCTGTTTCAACTTATGTGACATGCACTATTTGATTTGATATAAAATTTAAAAAAGAAAAAAGGTTTTCTGAATTTTGTGATCTAGAACCTTAGACATTTGTGTAACATATATACTCTCTGTCCTTATTTATTTGTCCACTTTAAAAATGATACACCTATTAAAACAACAATGATTAGCACAGTTAAGTTATCATTTTACCCTTATTAAGTATGATTTCAAAAATAATGAATTAAAACTTTAAAAAATTCAAGAAGTTTAAATGAGGGTATAATATATATTTTTTTGTCATTTCTTGATTTGTCAAAATAGACAAGTAAATAGAAACAGCTAAAAGAGAAAATATGAACAAATAAATGAATGTAGCTTCTAATTATAATAAAATGACATGTTTAAGGGAGGACTAAAAAAGAAAGACGTGACACATAAATTGACGGCAAAGGTGTGTATAACATCTTATTACTTGAGTAGAGTTGATGACAACTTAAAGGACTATATATGCATTTTCCTAGAAAAGAAAGGTATAATTCGACATATCTTTTCATTTTTTTAAAAATTAGTAACATAAGTGATCAAAATGGTAATTAATAGTGATCAAAACTTAATATAAATATTGAATATGTTTAAACTAATTTACAGCTGAGCTTTTGGGGTTCGATGATTATATTCCACCCTATGCATCTGCAAGGGGTGAAGACATTCTCAAAGGTGTTAATTTTGCATCTGCTGCTGCTGGAATTAGAGAAGAAACTGGTCAACAATTGGTACTTACCGTGTTCTTCGTTTTAATTCATTTGTCATACTTTCCCTTTTAGTCTGTCTTTTAACTTCTAATAACACGTTATATTCACATACTGTTGCTACTTTTTTCGTTCACAAAATATTTATAGGGAGCAAGGATTACGTTTGGTGGTCAGGTAAATAATTACAGGAACACAGTGCAACAAGTGGTGCAAATACTTGGAGATGAAAATTCTGCTGCTAATTATTTGAGCAAATGCATTTACTCAATTGGATTAGGCAGCAATGATTATCTCAATAATTATTTCATGCCTCAATATTACTCCACTAGCAGACAATTTAATCCTGATCAATATGCTGATGT</genome_strand>
        <mrna_strand>ACTAGTATACTATACATTTTTTTTCTTCCCCCTTAGCTTCTTTTTGTTTGATGAAATGGGTGCTGGGGAAGTAAAGAGGAGATGGATAGTGGTGTATGTAGTGGTAGTTTTAGGATTGAATTTGGGGGTAAATGTAAATGCACAACAAGTGCCTTGTTATTTTATATTTGGTGATTCATTAGTGGATAATGGGAATAACAACAATATTCAGTCATTGGCTAGGGCTAATTACTTGCCTTATGGTATTGATTATCCTGATGGTCCAACTGGAAGGTTTTCCAATGGAAAAACAACTGTTGATGTCATTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGCTTTTGGGGTTCGATGATTATATTCCACCCTATGCATCTGCAAGGGGTGAAGACATTCTCAAAGGTGTTAATTTTGCATCTGCTGCTGCTGGAATTAGAGAAGAAACTGGTCAACAATTG..............................................................................................................................GGAGCAAGGATTACGTTTGGTGGTCAGGTAAATAATTACAGGAACACAGTGCAACAAGTGGTGCAAATACTTGGAGATGAAAATTCTGCTGCTAATTATTTGAGCAAATGCATTTACTCAATTGGATTANGCAGCAATGATTATCTCAATAATTATTTCATGCCTCAATATTACTCCACTAGCAGACAATTTAATCCTGATCAATATGCTGATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E343693" ref_strand="+" ref_description="SGN-E343693 [cTOF-20-M16]">
      <seq>gagagagagaactagtatactatacattttttttcttcccccttagcttctttttgtttgatgaaatgggtgctggggaagtaaagaggagatggatagtggtgtatgtagtggtagttttaggattgaatttgggggtaaatgtaaatgcacaacaagtgccttgttattttatatttggtgattcattagtggataatgggaataacaacaatattcagtcattggctagggctaattacttgccttatggtattgattatcctgatggtccaactggaaggttttccaatggaaaaacaactgttgatgtcattgctgagcttttggggttcgatgattatattccaccctatgcatctgcaaggggtgaagacattctcaaaggtgttaattttgcatctgctgctgctggaattagagaagaaactggtcaacaattgggagcaaggattacgtttggtggtcaggtaaataattacaggaacacagtgcaacaagtggtgcaaatacttggagatgaaaattctgctgctaattatttgagcaaatgcatttactcaattggattaggcagcaatgattatctcaataattatttcatgcctcaatattactccactagcagacaatttaatcctgatcaatatgnctgatgttctaattcaacaatactctcaacaactaaagactttgtatgactatggagcaaggaagtttgtcttaattggagtgggccaaattggttgtagcccaaatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="+" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="102990" stop="105270"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="103292" g_stop="103597" g_length="306"/>
          <reference_exon_boundary r_type="cDNA" r_start="13" r_stop="318" r_length="306" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="103598" i_stop="104283" i_length="686">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="104284" g_stop="104408" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="319" r_stop="443" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="104409" i_stop="104534" i_length="126">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="104535" g_stop="104780" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="444" r_stop="690" r_length="247" r_score="0.992"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="104781" i_stop="104899" i_length="119">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.886" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="104900" g_stop="104970" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="691" r_stop="761" r_length="71" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="+" ref_id="SGN-E343693" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>748</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E343693" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="103292" e_stop="103597"/>
          <exon e_start="104284" e_stop="104408"/>
          <exon e_start="104535" e_stop="104780"/>
          <exon e_start="104900" e_stop="104970"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGTATACTATACATTTTTTTTCTTCCCCCTTAGCTTCTTTTTGTTTGATGAAATGGGTGCTGGGGAAGTAAAGAGGAGATGGATAGTGGTGTATGTAGTGGTAGTTTTAGGATTGAATTTGGGGGTAAATGTAAATGCACAACAAGTGCCTTGTTATTTTATATTTGGTGATTCATTAGTGGATAATGGGAATAACAACAATATTCAGTCATTGGCTAGGGCTAATTACTTGCCTTATGGTATTGATTATCCTGATGGTCCAACTGGAAGGTTTTCCAATGGAAAAACAACTGTTGATGTCATTGGTTAGTATCTCATCTCACTTAAAAGTATTCTAATGTGTGTTATACTTTCTCTGTTTCAACTTATGTGACATGCACTATTTGATTTGATATAAAATTTAAAAAAGAAAAAAGGTTTTCTGAATTTTGTGATCTAGAACCTTAGACATTTGTGTAACATATATACTCTCTGTCCTTATTTATTTGTCCACTTTAAAAATGATACACCTATTAAAACAACAATGATTAGCACAGTTAAGTTATCATTTTACCCTTATTAAGTATGATTTCAAAAATAATGAATTAAAACTTTAAAAAATTCAAGAAGTTTAAATGAGGGTATAATATATATTTTTTTGTCATTTCTTGATTTGTCAAAATAGACAAGTAAATAGAAACAGCTAAAAGAGAAAATATGAACAAATAAATGAATGTAGCTTCTAATTATAATAAAATGACATGTTTAAGGGAGGACTAAAAAAGAAAGACGTGACACATAAATTGACGGCAAAGGTGTGTATAACATCTTATTACTTGAGTAGAGTTGATGACAACTTAAAGGACTATATATGCATTTTCCTAGAAAAGAAAGGTATAATTCGACATATCTTTTCATTTTTTTAAAAATTAGTAACATAAGTGATCAAAATGGTAATTAATAGTGATCAAAACTTAATATAAATATTGAATATGTTTAAACTAATTTACAGCTGAGCTTTTGGGGTTCGATGATTATATTCCACCCTATGCATCTGCAAGGGGTGAAGACATTCTCAAAGGTGTTAATTTTGCATCTGCTGCTGCTGGAATTAGAGAAGAAACTGGTCAACAATTGGTACTTACCGTGTTCTTCGTTTTAATTCATTTGTCATACTTTCCCTTTTAGTCTGTCTTTTAACTTCTAATAACACGTTATATTCACATACTGTTGCTACTTTTTTCGTTCACAAAATATTTATAGGGAGCAAGGATTACGTTTGGTGGTCAGGTAAATAATTACAGGAACACAGTGCAACAAGTGGTGCAAATACTTGGAGATGAAAATTCTGCTGCTAATTATTTGAGCAAATGCATTTACTCAATTGGATTAGGCAGCAATGATTATCTCAATAATTATTTCATGCCTCAATATTACTCCACTAGCAGACAATTTAATCCTGATCAATATG-CTGATGTTCTAATTCAACAATACTCTCAACAACTAAAGGTGAGTTTGAATCACCTGATTAAAAGTAATCGATAAACATATAACATGTTTAAAGTAAAGTACTTGCGTTTTAATATTAGAGATAATATCATAAAAGATCTAATTGGCTTTTACATCAGACTTTGTATGACTATGGAGCAAGGAAGTTTGTCTTAATTGGAGTGGGCCAAATTGGTTGTAGCCCAAATGC</genome_strand>
        <mrna_strand>TAGTATACTATACATTTTTTTTCTTCCCCCTTAGCTTCTTTTTGTTTGATGAAATGGGTGCTGGGGAAGTAAAGAGGAGATGGATAGTGGTGTATGTAGTGGTAGTTTTAGGATTGAATTTGGGGGTAAATGTAAATGCACAACAAGTGCCTTGTTATTTTATATTTGGTGATTCATTAGTGGATAATGGGAATAACAACAATATTCAGTCATTGGCTAGGGCTAATTACTTGCCTTATGGTATTGATTATCCTGATGGTCCAACTGGAAGGTTTTCCAATGGAAAAACAACTGTTGATGTCATTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGCTTTTGGGGTTCGATGATTATATTCCACCCTATGCATCTGCAAGGGGTGAAGACATTCTCAAAGGTGTTAATTTTGCATCTGCTGCTGCTGGAATTAGAGAAGAAACTGGTCAACAATTG..............................................................................................................................GGAGCAAGGATTACGTTTGGTGGTCAGGTAAATAATTACAGGAACACAGTGCAACAAGTGGTGCAAATACTTGGAGATGAAAATTCTGCTGCTAATTATTTGAGCAAATGCATTTACTCAATTGGATTAGGCAGCAATGATTATCTCAATAATTATTTCATGCCTCAATATTACTCCACTAGCAGACAATTTAATCCTGATCAATATGNCTGATGTTCTAATTCAACAATACTCTCAACAACTAAAG.......................................................................................................................ACTTTGTATGACTATGGAGCAAGGAAGTTTGTCTTAATTGGAGTGGGCCAAATTGGTTGTAGCCCAAATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E321845" ref_strand="+" ref_description="SGN-E321845 [cTOB-25-P16]">
      <seq>tagtatactatacattttttttcttcccccttagcttctttttgtttgatgaaatgggtgctggggaagtaaagaggagatggatagtggtgtatgtagtggtagttttaggattgaatttgggggtaaatgtaaatgcacaacaagtgccttgttattttatatttggtgattcattagtggataatgggaataacaacaatattcagtcattggctagggctaattacttgccttatggtattgattatcctgatggtccaactggaaggttttccaatggaaaaacaactgttgatgtcattgctgagcttttggggttcgatgattatattccaccctatgcatctgcaaggggtgaagacattctcaaaggtgttaattttgcatctgctgctgctggaattagagaagaaactggtcaacaattgggagcaaagattacgtttggtggtcaggtaaataattacaggaacacagtgcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="+" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="102992" stop="104888"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="103292" g_stop="103597" g_length="306"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="306" r_length="306" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="103598" i_stop="104283" i_length="686">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="104284" g_stop="104408" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="307" r_stop="431" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="104409" i_stop="104534" i_length="126">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="104535" g_stop="104588" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="432" r_stop="485" r_length="54" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="+" ref_id="SGN-E321845" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>485</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E321845" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="103292" e_stop="103597"/>
          <exon e_start="104284" e_stop="104408"/>
          <exon e_start="104535" e_stop="104588"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGTATACTATACATTTTTTTTCTTCCCCCTTAGCTTCTTTTTGTTTGATGAAATGGGTGCTGGGGAAGTAAAGAGGAGATGGATAGTGGTGTATGTAGTGGTAGTTTTAGGATTGAATTTGGGGGTAAATGTAAATGCACAACAAGTGCCTTGTTATTTTATATTTGGTGATTCATTAGTGGATAATGGGAATAACAACAATATTCAGTCATTGGCTAGGGCTAATTACTTGCCTTATGGTATTGATTATCCTGATGGTCCAACTGGAAGGTTTTCCAATGGAAAAACAACTGTTGATGTCATTGGTTAGTATCTCATCTCACTTAAAAGTATTCTAATGTGTGTTATACTTTCTCTGTTTCAACTTATGTGACATGCACTATTTGATTTGATATAAAATTTAAAAAAGAAAAAAGGTTTTCTGAATTTTGTGATCTAGAACCTTAGACATTTGTGTAACATATATACTCTCTGTCCTTATTTATTTGTCCACTTTAAAAATGATACACCTATTAAAACAACAATGATTAGCACAGTTAAGTTATCATTTTACCCTTATTAAGTATGATTTCAAAAATAATGAATTAAAACTTTAAAAAATTCAAGAAGTTTAAATGAGGGTATAATATATATTTTTTTGTCATTTCTTGATTTGTCAAAATAGACAAGTAAATAGAAACAGCTAAAAGAGAAAATATGAACAAATAAATGAATGTAGCTTCTAATTATAATAAAATGACATGTTTAAGGGAGGACTAAAAAAGAAAGACGTGACACATAAATTGACGGCAAAGGTGTGTATAACATCTTATTACTTGAGTAGAGTTGATGACAACTTAAAGGACTATATATGCATTTTCCTAGAAAAGAAAGGTATAATTCGACATATCTTTTCATTTTTTTAAAAATTAGTAACATAAGTGATCAAAATGGTAATTAATAGTGATCAAAACTTAATATAAATATTGAATATGTTTAAACTAATTTACAGCTGAGCTTTTGGGGTTCGATGATTATATTCCACCCTATGCATCTGCAAGGGGTGAAGACATTCTCAAAGGTGTTAATTTTGCATCTGCTGCTGCTGGAATTAGAGAAGAAACTGGTCAACAATTGGTACTTACCGTGTTCTTCGTTTTAATTCATTTGTCATACTTTCCCTTTTAGTCTGTCTTTTAACTTCTAATAACACGTTATATTCACATACTGTTGCTACTTTTTTCGTTCACAAAATATTTATAGGGAGCAAGGATTACGTTTGGTGGTCAGGTAAATAATTACAGGAACACAGTGCAA</genome_strand>
        <mrna_strand>TAGTATACTATACATTTTTTTTCTTCCCCCTTAGCTTCTTTTTGTTTGATGAAATGGGTGCTGGGGAAGTAAAGAGGAGATGGATAGTGGTGTATGTAGTGGTAGTTTTAGGATTGAATTTGGGGGTAAATGTAAATGCACAACAAGTGCCTTGTTATTTTATATTTGGTGATTCATTAGTGGATAATGGGAATAACAACAATATTCAGTCATTGGCTAGGGCTAATTACTTGCCTTATGGTATTGATTATCCTGATGGTCCAACTGGAAGGTTTTCCAATGGAAAAACAACTGTTGATGTCATTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGCTTTTGGGGTTCGATGATTATATTCCACCCTATGCATCTGCAAGGGGTGAAGACATTCTCAAAGGTGTTAATTTTGCATCTGCTGCTGCTGGAATTAGAGAAGAAACTGGTCAACAATTG..............................................................................................................................GGAGCAAAGATTACGTTTGGTGGTCAGGTAAATAATTACAGGAACACAGTGCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E358775" ref_strand="+" ref_description="SGN-E358775 [cLHT-24-G10]">
      <seq>tagtatactatacatttttttcttccccccttagcttctttttgtttgatgaaatgggtgctggggaagtaaagagatggatagtggtgtatgtagtggtagttttaggattgaattttggggtaaatgtaaatgcacaacaagtgccttgttattttatatttggtgattcattagtggataatgggaataacaacaatattcagtcattggctagggctaattacttgccttatggtgttgattatgctgatggtccaactggaaggttttccaatggcaaaactactgttgatgtcattgctgagcttttggggttcgatgattatattccaccctatgcatctgcaaggggtgaagacattctcaaaggtgttaattatgcatctgctgctgctggaattagagaagaaactggtcaacaattgggagcaaggattac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="+" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="102992" stop="104711"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="103292" g_stop="103597" g_length="306"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="303" r_length="303" r_score="0.964"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="103598" i_stop="104283" i_length="686">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="104284" g_stop="104408" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="304" r_stop="428" r_length="125" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="104409" i_stop="104534" i_length="126">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.990" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="104535" g_stop="104548" g_length="14"/>
          <reference_exon_boundary r_type="cDNA" r_start="429" r_stop="442" r_length="14" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="+" ref_id="SGN-E358775" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>445</cumulative_length_of_scored_exons>
        <coverage percentage="1.007" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E358775" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="103292" e_stop="103597"/>
          <exon e_start="104284" e_stop="104408"/>
          <exon e_start="104535" e_stop="104548"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGTATACTATACATTTTTTTTCTTCCCCCTTAGCTTCTTTTTGTTTGATGAAATGGGTGCTGGGGAAGTAAAGAGGAGATGGATAGTGGTGTATGTAGTGGTAGTTTTAGGATTGAATTTGGGGGTAAATGTAAATGCACAACAAGTGCCTTGTTATTTTATATTTGGTGATTCATTAGTGGATAATGGGAATAACAACAATATTCAGTCATTGGCTAGGGCTAATTACTTGCCTTATGGTATTGATTATCCTGATGGTCCAACTGGAAGGTTTTCCAATGGAAAAACAACTGTTGATGTCATTGGTTAGTATCTCATCTCACTTAAAAGTATTCTAATGTGTGTTATACTTTCTCTGTTTCAACTTATGTGACATGCACTATTTGATTTGATATAAAATTTAAAAAAGAAAAAAGGTTTTCTGAATTTTGTGATCTAGAACCTTAGACATTTGTGTAACATATATACTCTCTGTCCTTATTTATTTGTCCACTTTAAAAATGATACACCTATTAAAACAACAATGATTAGCACAGTTAAGTTATCATTTTACCCTTATTAAGTATGATTTCAAAAATAATGAATTAAAACTTTAAAAAATTCAAGAAGTTTAAATGAGGGTATAATATATATTTTTTTGTCATTTCTTGATTTGTCAAAATAGACAAGTAAATAGAAACAGCTAAAAGAGAAAATATGAACAAATAAATGAATGTAGCTTCTAATTATAATAAAATGACATGTTTAAGGGAGGACTAAAAAAGAAAGACGTGACACATAAATTGACGGCAAAGGTGTGTATAACATCTTATTACTTGAGTAGAGTTGATGACAACTTAAAGGACTATATATGCATTTTCCTAGAAAAGAAAGGTATAATTCGACATATCTTTTCATTTTTTTAAAAATTAGTAACATAAGTGATCAAAATGGTAATTAATAGTGATCAAAACTTAATATAAATATTGAATATGTTTAAACTAATTTACAGCTGAGCTTTTGGGGTTCGATGATTATATTCCACCCTATGCATCTGCAAGGGGTGAAGACATTCTCAAAGGTGTTAATTTTGCATCTGCTGCTGCTGGAATTAGAGAAGAAACTGGTCAACAATTGGTACTTACCGTGTTCTTCGTTTTAATTCATTTGTCATACTTTCCCTTTTAGTCTGTCTTTTAACTTCTAATAACACGTTATATTCACATACTGTTGCTACTTTTTTCGTTCACAAAATATTTATAGGGAGCAAGGATTAC</genome_strand>
        <mrna_strand>TAGTATACTATACATTTTTTTCTTCCCCCCTTAGCTTCTTTTTGTTTGATGAAATGGGTGCTGGGGAAGTAAAGAG---ATGGATAGTGGTGTATGTAGTGGTAGTTTTAGGATTGAATTTTGGGGTAAATGTAAATGCACAACAAGTGCCTTGTTATTTTATATTTGGTGATTCATTAGTGGATAATGGGAATAACAACAATATTCAGTCATTGGCTAGGGCTAATTACTTGCCTTATGGTGTTGATTATGCTGATGGTCCAACTGGAAGGTTTTCCAATGGCAAAACTACTGTTGATGTCATTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGCTTTTGGGGTTCGATGATTATATTCCACCCTATGCATCTGCAAGGGGTGAAGACATTCTCAAAGGTGTTAATTATGCATCTGCTGCTGCTGGAATTAGAGAAGAAACTGGTCAACAATTG..............................................................................................................................GGAGCAAGGATTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E324184" ref_strand="+" ref_description="SGN-E324184 [cTOC-4-B20]">
      <seq>tatactatacattttttttcttcccccttagcttctttttgtttgatgaaatgggtgctggggaagtaaagaggagatggatagtggtgtatgtagtggtagttttaggattgaatttgggggtaaatgtaaatgcacaacaagtgccttgttattttatatttggtgattcattagtggataatgggaataacaacaatattcagtcattggctagggctaattacttgccttatggtattgattatcctgatggtccaactggaaggttttccaatggaaaaacaactgttgatgtcattgctgagcttttggggttcgatgattatattccaccctatgcatctgcaaggggtgaagacattctcaaaggtgttaattttgcatctgctgctgctggaattagagaagaaactggtcaacaattgggagcaaggattacgtttggtggtcaggtaaataattacaggaacacagtgcaacaagtggtgcaaatacttggagatgaaaattctgctgctaattatttgagcaaatgcatttactcaattggattaggcagcaatgattatctcaataattatttcatgcctcaatattac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="+" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="102995" stop="105008"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="103295" g_stop="103597" g_length="303"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="303" r_length="303" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="103598" i_stop="104283" i_length="686">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="104284" g_stop="104408" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="304" r_stop="428" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="104409" i_stop="104534" i_length="126">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="104535" g_stop="104708" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="429" r_stop="602" r_length="174" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="+" ref_id="SGN-E324184" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>602</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E324184" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="103295" e_stop="103597"/>
          <exon e_start="104284" e_stop="104408"/>
          <exon e_start="104535" e_stop="104708"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATACTATACATTTTTTTTCTTCCCCCTTAGCTTCTTTTTGTTTGATGAAATGGGTGCTGGGGAAGTAAAGAGGAGATGGATAGTGGTGTATGTAGTGGTAGTTTTAGGATTGAATTTGGGGGTAAATGTAAATGCACAACAAGTGCCTTGTTATTTTATATTTGGTGATTCATTAGTGGATAATGGGAATAACAACAATATTCAGTCATTGGCTAGGGCTAATTACTTGCCTTATGGTATTGATTATCCTGATGGTCCAACTGGAAGGTTTTCCAATGGAAAAACAACTGTTGATGTCATTGGTTAGTATCTCATCTCACTTAAAAGTATTCTAATGTGTGTTATACTTTCTCTGTTTCAACTTATGTGACATGCACTATTTGATTTGATATAAAATTTAAAAAAGAAAAAAGGTTTTCTGAATTTTGTGATCTAGAACCTTAGACATTTGTGTAACATATATACTCTCTGTCCTTATTTATTTGTCCACTTTAAAAATGATACACCTATTAAAACAACAATGATTAGCACAGTTAAGTTATCATTTTACCCTTATTAAGTATGATTTCAAAAATAATGAATTAAAACTTTAAAAAATTCAAGAAGTTTAAATGAGGGTATAATATATATTTTTTTGTCATTTCTTGATTTGTCAAAATAGACAAGTAAATAGAAACAGCTAAAAGAGAAAATATGAACAAATAAATGAATGTAGCTTCTAATTATAATAAAATGACATGTTTAAGGGAGGACTAAAAAAGAAAGACGTGACACATAAATTGACGGCAAAGGTGTGTATAACATCTTATTACTTGAGTAGAGTTGATGACAACTTAAAGGACTATATATGCATTTTCCTAGAAAAGAAAGGTATAATTCGACATATCTTTTCATTTTTTTAAAAATTAGTAACATAAGTGATCAAAATGGTAATTAATAGTGATCAAAACTTAATATAAATATTGAATATGTTTAAACTAATTTACAGCTGAGCTTTTGGGGTTCGATGATTATATTCCACCCTATGCATCTGCAAGGGGTGAAGACATTCTCAAAGGTGTTAATTTTGCATCTGCTGCTGCTGGAATTAGAGAAGAAACTGGTCAACAATTGGTACTTACCGTGTTCTTCGTTTTAATTCATTTGTCATACTTTCCCTTTTAGTCTGTCTTTTAACTTCTAATAACACGTTATATTCACATACTGTTGCTACTTTTTTCGTTCACAAAATATTTATAGGGAGCAAGGATTACGTTTGGTGGTCAGGTAAATAATTACAGGAACACAGTGCAACAAGTGGTGCAAATACTTGGAGATGAAAATTCTGCTGCTAATTATTTGAGCAAATGCATTTACTCAATTGGATTAGGCAGCAATGATTATCTCAATAATTATTTCATGCCTCAATATTAC</genome_strand>
        <mrna_strand>TATACTATACATTTTTTTTCTTCCCCCTTAGCTTCTTTTTGTTTGATGAAATGGGTGCTGGGGAAGTAAAGAGGAGATGGATAGTGGTGTATGTAGTGGTAGTTTTAGGATTGAATTTGGGGGTAAATGTAAATGCACAACAAGTGCCTTGTTATTTTATATTTGGTGATTCATTAGTGGATAATGGGAATAACAACAATATTCAGTCATTGGCTAGGGCTAATTACTTGCCTTATGGTATTGATTATCCTGATGGTCCAACTGGAAGGTTTTCCAATGGAAAAACAACTGTTGATGTCATTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGCTTTTGGGGTTCGATGATTATATTCCACCCTATGCATCTGCAAGGGGTGAAGACATTCTCAAAGGTGTTAATTTTGCATCTGCTGCTGCTGGAATTAGAGAAGAAACTGGTCAACAATTG..............................................................................................................................GGAGCAAGGATTACGTTTGGTGGTCAGGTAAATAATTACAGGAACACAGTGCAACAAGTGGTGCAAATACTTGGAGATGAAAATTCTGCTGCTAATTATTTGAGCAAATGCATTTACTCAATTGGATTAGGCAGCAATGATTATCTCAATAATTATTTCATGCCTCAATATTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E319862" ref_strand="+" ref_description="SGN-E319862 [cTOB-12-E1]">
      <seq>tatactatacattttttttcttcccccttagcttctttttgtttgatgaaatgggtgctggggaagtaaagaggagatggatagtggtgtatgtagtggtagttttaggattgaatttgggggtaaatgtaaatgcacaacaagtgccttgttattttatatttggtgattcattagtggataatgggaataacaacaatattcagtcattggctagggctaattacttgccttatggtattgattatcctgatggtccaactggaaggttttccaatggaaaaacaactgttgatgtcattgctgatcttttggggttcgatgattatattccaccctatgcatctgcaaggggtgaagacattctcaaaggtgttaattttgcatctgctgctgctggaattagagaagaaactggtcaacaattgggagcaaggattacgtttggtggtcaggtaaataattacaggaacacagtgcatcaagtggtgcaaatacttggagatgaaaattctgctgctaattatttgagcaaatgcattta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="+" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="102995" stop="104950"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="103295" g_stop="103597" g_length="303"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="303" r_length="303" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="103598" i_stop="104283" i_length="686">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="104284" g_stop="104408" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="304" r_stop="428" r_length="125" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="104409" i_stop="104534" i_length="126">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="104535" g_stop="104650" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="429" r_stop="544" r_length="116" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="+" ref_id="SGN-E319862" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>544</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E319862" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="103295" e_stop="103597"/>
          <exon e_start="104284" e_stop="104408"/>
          <exon e_start="104535" e_stop="104650"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATACTATACATTTTTTTTCTTCCCCCTTAGCTTCTTTTTGTTTGATGAAATGGGTGCTGGGGAAGTAAAGAGGAGATGGATAGTGGTGTATGTAGTGGTAGTTTTAGGATTGAATTTGGGGGTAAATGTAAATGCACAACAAGTGCCTTGTTATTTTATATTTGGTGATTCATTAGTGGATAATGGGAATAACAACAATATTCAGTCATTGGCTAGGGCTAATTACTTGCCTTATGGTATTGATTATCCTGATGGTCCAACTGGAAGGTTTTCCAATGGAAAAACAACTGTTGATGTCATTGGTTAGTATCTCATCTCACTTAAAAGTATTCTAATGTGTGTTATACTTTCTCTGTTTCAACTTATGTGACATGCACTATTTGATTTGATATAAAATTTAAAAAAGAAAAAAGGTTTTCTGAATTTTGTGATCTAGAACCTTAGACATTTGTGTAACATATATACTCTCTGTCCTTATTTATTTGTCCACTTTAAAAATGATACACCTATTAAAACAACAATGATTAGCACAGTTAAGTTATCATTTTACCCTTATTAAGTATGATTTCAAAAATAATGAATTAAAACTTTAAAAAATTCAAGAAGTTTAAATGAGGGTATAATATATATTTTTTTGTCATTTCTTGATTTGTCAAAATAGACAAGTAAATAGAAACAGCTAAAAGAGAAAATATGAACAAATAAATGAATGTAGCTTCTAATTATAATAAAATGACATGTTTAAGGGAGGACTAAAAAAGAAAGACGTGACACATAAATTGACGGCAAAGGTGTGTATAACATCTTATTACTTGAGTAGAGTTGATGACAACTTAAAGGACTATATATGCATTTTCCTAGAAAAGAAAGGTATAATTCGACATATCTTTTCATTTTTTTAAAAATTAGTAACATAAGTGATCAAAATGGTAATTAATAGTGATCAAAACTTAATATAAATATTGAATATGTTTAAACTAATTTACAGCTGAGCTTTTGGGGTTCGATGATTATATTCCACCCTATGCATCTGCAAGGGGTGAAGACATTCTCAAAGGTGTTAATTTTGCATCTGCTGCTGCTGGAATTAGAGAAGAAACTGGTCAACAATTGGTACTTACCGTGTTCTTCGTTTTAATTCATTTGTCATACTTTCCCTTTTAGTCTGTCTTTTAACTTCTAATAACACGTTATATTCACATACTGTTGCTACTTTTTTCGTTCACAAAATATTTATAGGGAGCAAGGATTACGTTTGGTGGTCAGGTAAATAATTACAGGAACACAGTGCAACAAGTGGTGCAAATACTTGGAGATGAAAATTCTGCTGCTAATTATTTGAGCAAATGCATTTA</genome_strand>
        <mrna_strand>TATACTATACATTTTTTTTCTTCCCCCTTAGCTTCTTTTTGTTTGATGAAATGGGTGCTGGGGAAGTAAAGAGGAGATGGATAGTGGTGTATGTAGTGGTAGTTTTAGGATTGAATTTGGGGGTAAATGTAAATGCACAACAAGTGCCTTGTTATTTTATATTTGGTGATTCATTAGTGGATAATGGGAATAACAACAATATTCAGTCATTGGCTAGGGCTAATTACTTGCCTTATGGTATTGATTATCCTGATGGTCCAACTGGAAGGTTTTCCAATGGAAAAACAACTGTTGATGTCATTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGATCTTTTGGGGTTCGATGATTATATTCCACCCTATGCATCTGCAAGGGGTGAAGACATTCTCAAAGGTGTTAATTTTGCATCTGCTGCTGCTGGAATTAGAGAAGAAACTGGTCAACAATTG..............................................................................................................................GGAGCAAGGATTACGTTTGGTGGTCAGGTAAATAATTACAGGAACACAGTGCATCAAGTGGTGCAAATACTTGGAGATGAAAATTCTGCTGCTAATTATTTGAGCAAATGCATTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E289904" ref_strand="+" ref_description="SGN-E289904 [cLET-9-I20]">
      <seq>tatactatacattttttttcttcccccttaacttctttttggttgatgaaatgggtgctggggaagtaaagaggagatggatagtggtgtatgtagtggtagttttaggattgaatttgggggtaaatgtaaatgcacaacaagtgccttgttattttatatttggtgattcattagtggataatgggaataacaacaatattcagtcattggctagggctaattacttgccttatggtattgattatcctga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="+" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="102995" stop="103847"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="103295" g_stop="103547" g_length="253"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="253" r_length="253" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="+" ref_id="SGN-E289904" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>253</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E289904" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="103295" e_stop="103547"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATACTATACATTTTTTTTCTTCCCCCTTAGCTTCTTTTTGTTTGATGAAATGGGTGCTGGGGAAGTAAAGAGGAGATGGATAGTGGTGTATGTAGTGGTAGTTTTAGGATTGAATTTGGGGGTAAATGTAAATGCACAACAAGTGCCTTGTTATTTTATATTTGGTGATTCATTAGTGGATAATGGGAATAACAACAATATTCAGTCATTGGCTAGGGCTAATTACTTGCCTTATGGTATTGATTATCCTGA</genome_strand>
        <mrna_strand>TATACTATACATTTTTTTTCTTCCCCCTTAACTTCTTTTTGGTTGATGAAATGGGTGCTGGGGAAGTAAAGAGGAGATGGATAGTGGTGTATGTAGTGGTAGTTTTAGGATTGAATTTGGGGGTAAATGTAAATGCACAACAAGTGCCTTGTTATTTTATATTTGGTGATTCATTAGTGGATAATGGGAATAACAACAATATTCAGTCATTGGCTAGGGCTAATTACTTGCCTTATGGTATTGATTATCCTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E567918" ref_strand="+" ref_description="SGN-E567918 [12119]">
      <seq>gtacacactttttttttcccccttagcttctttttgtgcgatgataatgggtgctttgggagtaaagagatggatagtggtgtatgtagtggtacttttaggattgaatttggggataaatgtaaatgcacaacaagtgccttgttattttatatttggtgattcattagtggataatgggaataacaacaatattcagtctttggctagggctaattacttgccttatggtattgattatcctgatggtccaactgggaggttttccaatggcaaaactactgttgatgtcattgctgagcttttggggttcgatgattatattccaccctatgcatctgcaaggggtgaagacattctcaaaggtgttaattatgcatctgctgctgctggaattagagaagaaactggccaacaattgggagcaaggattacctttggtggtcaggtaaataattacaggaacacagtgcaacaagtggtgcaaatacttggaggatgaaaattctgctgctaattatctgagcaagtgtatatactc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="+" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="103000" stop="104953"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="103299" g_stop="103597" g_length="299"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="296" r_length="296" r_score="0.933"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="103598" i_stop="104283" i_length="686">
            <donor d_prob="1.000" d_score="0.94"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="104284" g_stop="104408" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="297" r_stop="421" r_length="125" r_score="0.984"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="104409" i_stop="104534" i_length="126">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.990" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="104535" g_stop="104653" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="422" r_stop="541" r_length="120" r_score="0.941"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="+" ref_id="SGN-E567918" ref_strand="+">
        <total_alignment_score>0.947</total_alignment_score>
        <cumulative_length_of_scored_exons>543</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E567918" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="103299" e_stop="103597"/>
          <exon e_start="104284" e_stop="104408"/>
          <exon e_start="104535" e_stop="104653"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTATACATTTTTTTTCTTCCCCCTTAGCTTCTTTTTGTTTGATGA-AATGGGTGCTGGGGAAGTAAAGAGGAGATGGATAGTGGTGTATGTAGTGGTAGTTTTAGGATTGAATTTGGGGGTAAATGTAAATGCACAACAAGTGCCTTGTTATTTTATATTTGGTGATTCATTAGTGGATAATGGGAATAACAACAATATTCAGTCATTGGCTAGGGCTAATTACTTGCCTTATGGTATTGATTATCCTGATGGTCCAACTGGAAGGTTTTCCAATGGAAAAACAACTGTTGATGTCATTGGTTAGTATCTCATCTCACTTAAAAGTATTCTAATGTGTGTTATACTTTCTCTGTTTCAACTTATGTGACATGCACTATTTGATTTGATATAAAATTTAAAAAAGAAAAAAGGTTTTCTGAATTTTGTGATCTAGAACCTTAGACATTTGTGTAACATATATACTCTCTGTCCTTATTTATTTGTCCACTTTAAAAATGATACACCTATTAAAACAACAATGATTAGCACAGTTAAGTTATCATTTTACCCTTATTAAGTATGATTTCAAAAATAATGAATTAAAACTTTAAAAAATTCAAGAAGTTTAAATGAGGGTATAATATATATTTTTTTGTCATTTCTTGATTTGTCAAAATAGACAAGTAAATAGAAACAGCTAAAAGAGAAAATATGAACAAATAAATGAATGTAGCTTCTAATTATAATAAAATGACATGTTTAAGGGAGGACTAAAAAAGAAAGACGTGACACATAAATTGACGGCAAAGGTGTGTATAACATCTTATTACTTGAGTAGAGTTGATGACAACTTAAAGGACTATATATGCATTTTCCTAGAAAAGAAAGGTATAATTCGACATATCTTTTCATTTTTTTAAAAATTAGTAACATAAGTGATCAAAATGGTAATTAATAGTGATCAAAACTTAATATAAATATTGAATATGTTTAAACTAATTTACAGCTGAGCTTTTGGGGTTCGATGATTATATTCCACCCTATGCATCTGCAAGGGGTGAAGACATTCTCAAAGGTGTTAATTTTGCATCTGCTGCTGCTGGAATTAGAGAAGAAACTGGTCAACAATTGGTACTTACCGTGTTCTTCGTTTTAATTCATTTGTCATACTTTCCCTTTTAGTCTGTCTTTTAACTTCTAATAACACGTTATATTCACATACTGTTGCTACTTTTTTCGTTCACAAAATATTTATAGGGAGCAAGGATTACGTTTGGTGGTCAGGTAAATAATTACAGGAACACAGTGCAACAAGTGGTGCAAATACTTGGA-GATGAAAATTCTGCTGCTAATTATTTGAGCAAATGCATTTACTC</genome_strand>
        <mrna_strand>GTACACACTTTTTTT-TTCCCCCTTAGCTTCTTTTTGTGCGATGATAATGGGTGCTTTGGGAGT-AA-A-GAGATGGATAGTGGTGTATGTAGTGGTACTTTTAGGATTGAATTTGGGGATAAATGTAAATGCACAACAAGTGCCTTGTTATTTTATATTTGGTGATTCATTAGTGGATAATGGGAATAACAACAATATTCAGTCTTTGGCTAGGGCTAATTACTTGCCTTATGGTATTGATTATCCTGATGGTCCAACTGGGAGGTTTTCCAATGGCAAAACTACTGTTGATGTCATTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGCTTTTGGGGTTCGATGATTATATTCCACCCTATGCATCTGCAAGGGGTGAAGACATTCTCAAAGGTGTTAATTATGCATCTGCTGCTGCTGGAATTAGAGAAGAAACTGGCCAACAATTG..............................................................................................................................GGAGCAAGGATTACCTTTGGTGGTCAGGTAAATAATTACAGGAACACAGTGCAACAAGTGGTGCAAATACTTGGAGGATGAAAATTCTGCTGCTAATTATCTGAGCAAGTGTATATACTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E339221" ref_strand="+" ref_description="SGN-E339221 [cTOF-4-O19]">
      <seq>tacattttttttcttcccccttagcttctttttgtttgatgaaatgggtgctggggaagtaaagaggagatggatagtggtgtatgtagtggtagttttaggattgaatttgggggtaaatgtaaatgcacaacaagtgccttgttattttatatttggtgattcattagtggataatgggaataacaacaatattcagtcattggctagggctaattacttgccttatggtattgattatcctgatggtccaactggaaggttttccaatggaaaaacaactgttgatgtcattgctgagcttttggggttcgatgattatattccaccctatgcatctgcaaggggtgaagacattctcaaaggtgttaattttgcatctgctgctgctggaattagagaagaaactggtcaacaattgggagcaaggattacgtttggtggtcaggtaaataattacaggaacacagtgcaacaagtggtgcaaatacttggagatgaaaattctgctgctaattatttgagcaaatgcatttactcaattggattaggcagcaatgattatctcaataattatttcatgcctcaatattactccactagcagacaatttaatcctgatcaatatgctgatgttctaattcaacaatactctcaacaactaaagactttgtatgactatggagcaaggaagtttgtcttaattggagtgggccaaattggttgtagcccaaatgctct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="+" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="103002" stop="105273"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="103302" g_stop="103597" g_length="296"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="296" r_length="296" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="103598" i_stop="104283" i_length="686">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="104284" g_stop="104408" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="297" r_stop="421" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="104409" i_stop="104534" i_length="126">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="104535" g_stop="104780" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="422" r_stop="667" r_length="246" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="104781" i_stop="104899" i_length="119">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.886" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="104900" g_stop="104973" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="668" r_stop="741" r_length="74" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="+" ref_id="SGN-E339221" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>741</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E339221" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="103302" e_stop="103597"/>
          <exon e_start="104284" e_stop="104408"/>
          <exon e_start="104535" e_stop="104780"/>
          <exon e_start="104900" e_stop="104973"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACATTTTTTTTCTTCCCCCTTAGCTTCTTTTTGTTTGATGAAATGGGTGCTGGGGAAGTAAAGAGGAGATGGATAGTGGTGTATGTAGTGGTAGTTTTAGGATTGAATTTGGGGGTAAATGTAAATGCACAACAAGTGCCTTGTTATTTTATATTTGGTGATTCATTAGTGGATAATGGGAATAACAACAATATTCAGTCATTGGCTAGGGCTAATTACTTGCCTTATGGTATTGATTATCCTGATGGTCCAACTGGAAGGTTTTCCAATGGAAAAACAACTGTTGATGTCATTGGTTAGTATCTCATCTCACTTAAAAGTATTCTAATGTGTGTTATACTTTCTCTGTTTCAACTTATGTGACATGCACTATTTGATTTGATATAAAATTTAAAAAAGAAAAAAGGTTTTCTGAATTTTGTGATCTAGAACCTTAGACATTTGTGTAACATATATACTCTCTGTCCTTATTTATTTGTCCACTTTAAAAATGATACACCTATTAAAACAACAATGATTAGCACAGTTAAGTTATCATTTTACCCTTATTAAGTATGATTTCAAAAATAATGAATTAAAACTTTAAAAAATTCAAGAAGTTTAAATGAGGGTATAATATATATTTTTTTGTCATTTCTTGATTTGTCAAAATAGACAAGTAAATAGAAACAGCTAAAAGAGAAAATATGAACAAATAAATGAATGTAGCTTCTAATTATAATAAAATGACATGTTTAAGGGAGGACTAAAAAAGAAAGACGTGACACATAAATTGACGGCAAAGGTGTGTATAACATCTTATTACTTGAGTAGAGTTGATGACAACTTAAAGGACTATATATGCATTTTCCTAGAAAAGAAAGGTATAATTCGACATATCTTTTCATTTTTTTAAAAATTAGTAACATAAGTGATCAAAATGGTAATTAATAGTGATCAAAACTTAATATAAATATTGAATATGTTTAAACTAATTTACAGCTGAGCTTTTGGGGTTCGATGATTATATTCCACCCTATGCATCTGCAAGGGGTGAAGACATTCTCAAAGGTGTTAATTTTGCATCTGCTGCTGCTGGAATTAGAGAAGAAACTGGTCAACAATTGGTACTTACCGTGTTCTTCGTTTTAATTCATTTGTCATACTTTCCCTTTTAGTCTGTCTTTTAACTTCTAATAACACGTTATATTCACATACTGTTGCTACTTTTTTCGTTCACAAAATATTTATAGGGAGCAAGGATTACGTTTGGTGGTCAGGTAAATAATTACAGGAACACAGTGCAACAAGTGGTGCAAATACTTGGAGATGAAAATTCTGCTGCTAATTATTTGAGCAAATGCATTTACTCAATTGGATTAGGCAGCAATGATTATCTCAATAATTATTTCATGCCTCAATATTACTCCACTAGCAGACAATTTAATCCTGATCAATATGCTGATGTTCTAATTCAACAATACTCTCAACAACTAAAGGTGAGTTTGAATCACCTGATTAAAAGTAATCGATAAACATATAACATGTTTAAAGTAAAGTACTTGCGTTTTAATATTAGAGATAATATCATAAAAGATCTAATTGGCTTTTACATCAGACTTTGTATGACTATGGAGCAAGGAAGTTTGTCTTAATTGGAGTGGGCCAAATTGGTTGTAGCCCAAATGCTCT</genome_strand>
        <mrna_strand>TACATTTTTTTTCTTCCCCCTTAGCTTCTTTTTGTTTGATGAAATGGGTGCTGGGGAAGTAAAGAGGAGATGGATAGTGGTGTATGTAGTGGTAGTTTTAGGATTGAATTTGGGGGTAAATGTAAATGCACAACAAGTGCCTTGTTATTTTATATTTGGTGATTCATTAGTGGATAATGGGAATAACAACAATATTCAGTCATTGGCTAGGGCTAATTACTTGCCTTATGGTATTGATTATCCTGATGGTCCAACTGGAAGGTTTTCCAATGGAAAAACAACTGTTGATGTCATTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGCTTTTGGGGTTCGATGATTATATTCCACCCTATGCATCTGCAAGGGGTGAAGACATTCTCAAAGGTGTTAATTTTGCATCTGCTGCTGCTGGAATTAGAGAAGAAACTGGTCAACAATTG..............................................................................................................................GGAGCAAGGATTACGTTTGGTGGTCAGGTAAATAATTACAGGAACACAGTGCAACAAGTGGTGCAAATACTTGGAGATGAAAATTCTGCTGCTAATTATTTGAGCAAATGCATTTACTCAATTGGATTAGGCAGCAATGATTATCTCAATAATTATTTCATGCCTCAATATTACTCCACTAGCAGACAATTTAATCCTGATCAATATGCTGATGTTCTAATTCAACAATACTCTCAACAACTAAAG.......................................................................................................................ACTTTGTATGACTATGGAGCAAGGAAGTTTGTCTTAATTGGAGTGGGCCAAATTGGTTGTAGCCCAAATGCTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E265551" ref_strand="+" ref_description="SGN-E265551 [cLEI-14-L23]">
      <seq>ttttgtttgatgaaatgggtgctggggaagtaaagaggagatggatagtggtgtatgtagtggtagttttaggattgaatttgggggtaaatgtaaatgcacaacaagtgccttgttattttatatttggtgattcattagtggataatgggaataacaacaatattcagtcattggctagggctaattacttgccttatggtattgattatcctgatggtccaactggaaggttttccaatggaaaaacaactgttgatgtcattgctgagcttttggggttcgatgattatattccaccctatgcatctgcaaggggtgaagacattctcaaaggtgttaattttgcatctgctgctgctggaattagagaagaaactggtcaacaattgggagcaaggattacgtttggtggtcaggtaaataattacaggaacacagtgcaacaagtggtgcaaatacttggagatgaaaattctgctgctaattatttgagcaaatgcatttactcaattggatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="+" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="103031" stop="104962"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="103331" g_stop="103597" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="267" r_length="267" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="103598" i_stop="104283" i_length="686">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="104284" g_stop="104408" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="268" r_stop="392" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="104409" i_stop="104534" i_length="126">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="104535" g_stop="104662" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="393" r_stop="520" r_length="128" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="+" ref_id="SGN-E265551" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>520</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E265551" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="103331" e_stop="103597"/>
          <exon e_start="104284" e_stop="104408"/>
          <exon e_start="104535" e_stop="104662"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTGTTTGATGAAATGGGTGCTGGGGAAGTAAAGAGGAGATGGATAGTGGTGTATGTAGTGGTAGTTTTAGGATTGAATTTGGGGGTAAATGTAAATGCACAACAAGTGCCTTGTTATTTTATATTTGGTGATTCATTAGTGGATAATGGGAATAACAACAATATTCAGTCATTGGCTAGGGCTAATTACTTGCCTTATGGTATTGATTATCCTGATGGTCCAACTGGAAGGTTTTCCAATGGAAAAACAACTGTTGATGTCATTGGTTAGTATCTCATCTCACTTAAAAGTATTCTAATGTGTGTTATACTTTCTCTGTTTCAACTTATGTGACATGCACTATTTGATTTGATATAAAATTTAAAAAAGAAAAAAGGTTTTCTGAATTTTGTGATCTAGAACCTTAGACATTTGTGTAACATATATACTCTCTGTCCTTATTTATTTGTCCACTTTAAAAATGATACACCTATTAAAACAACAATGATTAGCACAGTTAAGTTATCATTTTACCCTTATTAAGTATGATTTCAAAAATAATGAATTAAAACTTTAAAAAATTCAAGAAGTTTAAATGAGGGTATAATATATATTTTTTTGTCATTTCTTGATTTGTCAAAATAGACAAGTAAATAGAAACAGCTAAAAGAGAAAATATGAACAAATAAATGAATGTAGCTTCTAATTATAATAAAATGACATGTTTAAGGGAGGACTAAAAAAGAAAGACGTGACACATAAATTGACGGCAAAGGTGTGTATAACATCTTATTACTTGAGTAGAGTTGATGACAACTTAAAGGACTATATATGCATTTTCCTAGAAAAGAAAGGTATAATTCGACATATCTTTTCATTTTTTTAAAAATTAGTAACATAAGTGATCAAAATGGTAATTAATAGTGATCAAAACTTAATATAAATATTGAATATGTTTAAACTAATTTACAGCTGAGCTTTTGGGGTTCGATGATTATATTCCACCCTATGCATCTGCAAGGGGTGAAGACATTCTCAAAGGTGTTAATTTTGCATCTGCTGCTGCTGGAATTAGAGAAGAAACTGGTCAACAATTGGTACTTACCGTGTTCTTCGTTTTAATTCATTTGTCATACTTTCCCTTTTAGTCTGTCTTTTAACTTCTAATAACACGTTATATTCACATACTGTTGCTACTTTTTTCGTTCACAAAATATTTATAGGGAGCAAGGATTACGTTTGGTGGTCAGGTAAATAATTACAGGAACACAGTGCAACAAGTGGTGCAAATACTTGGAGATGAAAATTCTGCTGCTAATTATTTGAGCAAATGCATTTACTCAATTGGATT</genome_strand>
        <mrna_strand>TTTTGTTTGATGAAATGGGTGCTGGGGAAGTAAAGAGGAGATGGATAGTGGTGTATGTAGTGGTAGTTTTAGGATTGAATTTGGGGGTAAATGTAAATGCACAACAAGTGCCTTGTTATTTTATATTTGGTGATTCATTAGTGGATAATGGGAATAACAACAATATTCAGTCATTGGCTAGGGCTAATTACTTGCCTTATGGTATTGATTATCCTGATGGTCCAACTGGAAGGTTTTCCAATGGAAAAACAACTGTTGATGTCATTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGCTTTTGGGGTTCGATGATTATATTCCACCCTATGCATCTGCAAGGGGTGAAGACATTCTCAAAGGTGTTAATTTTGCATCTGCTGCTGCTGGAATTAGAGAAGAAACTGGTCAACAATTG..............................................................................................................................GGAGCAAGGATTACGTTTGGTGGTCAGGTAAATAATTACAGGAACACAGTGCAACAAGTGGTGCAAATACTTGGAGATGAAAATTCTGCTGCTAATTATTTGAGCAAATGCATTTACTCAATTGGATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E327240" ref_strand="+" ref_description="SGN-E327240 [cTOC-19-O1]">
      <seq>gtttgatgaaatgggtgctggggaagtaaagaggagatggatagtggtgtatgtagtggtagttttaggattgaatttgggggtaaatgtaaatgcacaacaagtgccttgttattttatatttggtgattcattagtggataatgggaataacaacaatattcagtcattggctagggctaattacttgccttatggtattgattatcctgatggtccaactggaaggttttccaatggaaaaacaactgttgatgtcattgctgagcttttggggttcgatgattatattccaccctatgcatctgcaaggggtgaagacattctcaaaggtgttaattttgcatctgctgctgctggaattagagaagaaactggtcaacaattgggagcaaggattacgtttggtggtcaggtaaataattacaggaacacagtgcaacaagtggtgcaaatacttggagatgaaaattctgctgctaattatttgagcaaatgcatttactcaattgggattaggcagcaatgattatctcaataattatttcatgccctcatattactccactagcagacaattttatcctgatncatatgctgatgttctaattcacaatactctnncacactaagactttgtatgacta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="+" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="103035" stop="105213"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="103335" g_stop="103597" g_length="263"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="263" r_length="263" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="103598" i_stop="104283" i_length="686">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="104284" g_stop="104408" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="264" r_stop="388" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="104409" i_stop="104534" i_length="126">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="104535" g_stop="104780" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="389" r_stop="633" r_length="245" r_score="0.939"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="104781" i_stop="104899" i_length="119">
            <donor d_prob="0.998" d_score="0.82"/>
            <acceptor a_prob="0.886" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="104900" g_stop="104913" g_length="14"/>
          <reference_exon_boundary r_type="cDNA" r_start="634" r_stop="647" r_length="14" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="+" ref_id="SGN-E327240" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>648</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E327240" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="103335" e_stop="103597"/>
          <exon e_start="104284" e_stop="104408"/>
          <exon e_start="104535" e_stop="104780"/>
          <exon e_start="104900" e_stop="104913"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTGATGAAATGGGTGCTGGGGAAGTAAAGAGGAGATGGATAGTGGTGTATGTAGTGGTAGTTTTAGGATTGAATTTGGGGGTAAATGTAAATGCACAACAAGTGCCTTGTTATTTTATATTTGGTGATTCATTAGTGGATAATGGGAATAACAACAATATTCAGTCATTGGCTAGGGCTAATTACTTGCCTTATGGTATTGATTATCCTGATGGTCCAACTGGAAGGTTTTCCAATGGAAAAACAACTGTTGATGTCATTGGTTAGTATCTCATCTCACTTAAAAGTATTCTAATGTGTGTTATACTTTCTCTGTTTCAACTTATGTGACATGCACTATTTGATTTGATATAAAATTTAAAAAAGAAAAAAGGTTTTCTGAATTTTGTGATCTAGAACCTTAGACATTTGTGTAACATATATACTCTCTGTCCTTATTTATTTGTCCACTTTAAAAATGATACACCTATTAAAACAACAATGATTAGCACAGTTAAGTTATCATTTTACCCTTATTAAGTATGATTTCAAAAATAATGAATTAAAACTTTAAAAAATTCAAGAAGTTTAAATGAGGGTATAATATATATTTTTTTGTCATTTCTTGATTTGTCAAAATAGACAAGTAAATAGAAACAGCTAAAAGAGAAAATATGAACAAATAAATGAATGTAGCTTCTAATTATAATAAAATGACATGTTTAAGGGAGGACTAAAAAAGAAAGACGTGACACATAAATTGACGGCAAAGGTGTGTATAACATCTTATTACTTGAGTAGAGTTGATGACAACTTAAAGGACTATATATGCATTTTCCTAGAAAAGAAAGGTATAATTCGACATATCTTTTCATTTTTTTAAAAATTAGTAACATAAGTGATCAAAATGGTAATTAATAGTGATCAAAACTTAATATAAATATTGAATATGTTTAAACTAATTTACAGCTGAGCTTTTGGGGTTCGATGATTATATTCCACCCTATGCATCTGCAAGGGGTGAAGACATTCTCAAAGGTGTTAATTTTGCATCTGCTGCTGCTGGAATTAGAGAAGAAACTGGTCAACAATTGGTACTTACCGTGTTCTTCGTTTTAATTCATTTGTCATACTTTCCCTTTTAGTCTGTCTTTTAACTTCTAATAACACGTTATATTCACATACTGTTGCTACTTTTTTCGTTCACAAAATATTTATAGGGAGCAAGGATTACGTTTGGTGGTCAGGTAAATAATTACAGGAACACAGTGCAACAAGTGGTGCAAATACTTGGAGATGAAAATTCTGCTGCTAATTATTTGAGCAAATGCATTTACTCAATT-GGATTAGGCAGCAATGATTATCTCAATAATTATTTCATGCCTCAATATTACTCCACTAGCAGACAATTTAATCCTGATCAATATGCTGATGTTCTAATTCAACAATACTCTCAACAACTAAAGGTGAGTTTGAATCACCTGATTAAAAGTAATCGATAAACATATAACATGTTTAAAGTAAAGTACTTGCGTTTTAATATTAGAGATAATATCATAAAAGATCTAATTGGCTTTTACATCAGACTTTGTATGACTA</genome_strand>
        <mrna_strand>GTTTGATGAAATGGGTGCTGGGGAAGTAAAGAGGAGATGGATAGTGGTGTATGTAGTGGTAGTTTTAGGATTGAATTTGGGGGTAAATGTAAATGCACAACAAGTGCCTTGTTATTTTATATTTGGTGATTCATTAGTGGATAATGGGAATAACAACAATATTCAGTCATTGGCTAGGGCTAATTACTTGCCTTATGGTATTGATTATCCTGATGGTCCAACTGGAAGGTTTTCCAATGGAAAAACAACTGTTGATGTCATTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGCTTTTGGGGTTCGATGATTATATTCCACCCTATGCATCTGCAAGGGGTGAAGACATTCTCAAAGGTGTTAATTTTGCATCTGCTGCTGCTGGAATTAGAGAAGAAACTGGTCAACAATTG..............................................................................................................................GGAGCAAGGATTACGTTTGGTGGTCAGGTAAATAATTACAGGAACACAGTGCAACAAGTGGTGCAAATACTTGGAGATGAAAATTCTGCTGCTAATTATTTGAGCAAATGCATTTACTCAATTGGGATTAGGCAGCAATGATTATCTCAATAATTATTTCATGCCCTCATATTACTCCACTAGCAGACAATTTTATCCTGATNCATATGCTGATGTTCTAATTC-ACAATACTCTNNCACACT-AAG.......................................................................................................................ACTTTGTATGACTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E332124" ref_strand="+" ref_description="SGN-E332124 [cTOD-16-O6]">
      <seq>aacaattgggagcaaggattacgtttggtggtcaggtaaataattacaggaacacagtgcaacaagtggtgcaaatacttggagatgaaaattctgctgctaattatttgagcaaatgcatttactcaattggattaggcagcaatgattatctcaataattatttcatgcctcaatattactccactagcagacaatttaatcctgatcaatatgctgatgttctaattcaacaatactctcaacaactaaagactttgtatgactatggagcaaggaagtttgtcttaattggagtgggccaaattggttgtagcccaaatgctctagcccaaaacagtcctgatggaagaacctgtgcagaaaatataaataatgcaaacaagttgttcaacaataggctaaagggtattgtggatgaattcaatggcaatacaccagatgcaaaattcatctacatcaatgcttatgatatcttccaagatttaattgacaatccctcagcatttggatttagagtaacgaatgctggatgttgtggagtaggaaggaataacgggcaaataacatgtcttccactacaaaatccttgccaaaatagagatgaatatgtattttgggatgcatttcatccaggtgaagctgcaaatatagttgttgggagaagatcatatagagctgaaagatcatcagatgcttatccttttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="+" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="104231" stop="105747"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="104401" g_stop="104408" g_length="8"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="8" r_length="8" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="104409" i_stop="104534" i_length="126">
            <donor d_prob="0.998" d_score="0.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="104535" g_stop="104780" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="9" r_stop="254" r_length="246" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="104781" i_stop="104899" i_length="119">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.886" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="104900" g_stop="105155" g_length="256"/>
          <reference_exon_boundary r_type="cDNA" r_start="255" r_stop="510" r_length="256" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="105156" i_stop="105249" i_length="94">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="105250" g_stop="105447" g_length="198"/>
          <reference_exon_boundary r_type="cDNA" r_start="511" r_stop="708" r_length="198" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="+" ref_id="SGN-E332124" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>708</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E332124" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="104401" e_stop="104408"/>
          <exon e_start="104535" e_stop="104780"/>
          <exon e_start="104900" e_stop="105155"/>
          <exon e_start="105250" e_stop="105447"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAATTGGTACTTACCGTGTTCTTCGTTTTAATTCATTTGTCATACTTTCCCTTTTAGTCTGTCTTTTAACTTCTAATAACACGTTATATTCACATACTGTTGCTACTTTTTTCGTTCACAAAATATTTATAGGGAGCAAGGATTACGTTTGGTGGTCAGGTAAATAATTACAGGAACACAGTGCAACAAGTGGTGCAAATACTTGGAGATGAAAATTCTGCTGCTAATTATTTGAGCAAATGCATTTACTCAATTGGATTAGGCAGCAATGATTATCTCAATAATTATTTCATGCCTCAATATTACTCCACTAGCAGACAATTTAATCCTGATCAATATGCTGATGTTCTAATTCAACAATACTCTCAACAACTAAAGGTGAGTTTGAATCACCTGATTAAAAGTAATCGATAAACATATAACATGTTTAAAGTAAAGTACTTGCGTTTTAATATTAGAGATAATATCATAAAAGATCTAATTGGCTTTTACATCAGACTTTGTATGACTATGGAGCAAGGAAGTTTGTCTTAATTGGAGTGGGCCAAATTGGTTGTAGCCCAAATGCTCTAGCCCAAAACAGTCCTGATGGAAGAACCTGTGCAGAAAATATAAATAATGCAAACAAGTTGTTCAACAATAGGCTAAAGGGTATTGTGGATGAATTCAATGGCAATACACCAGATGCAAAATTCATCTACATCAATGCTTATGATATCTTCCAAGATTTAATTGACAATCCCTCAGCATTTGGTAAATATTTCTTTCTCATGCGAGTCATTTTTTTTTAATAAACAGACTTAAAAAAAAATAGTATTGACAAACTTGACTTTTTGACAATGTTCAGGATTTAGAGTAACGAATGCTGGATGTTGTGGAGTAGGAAGGAATAACGGGCAAATAACATGTCTTCCACTACAAAATCCTTGCCAAAATAGAGATGAATATGTATTTTGGGATGCATTTCATCCAGGTGAAGCTGCAAATATAGTTGTTGGGAGAAGATCATATAGAGCTGAAAGATCATCAGATGCTTATCCTTTTG</genome_strand>
        <mrna_strand>AACAATTG..............................................................................................................................GGAGCAAGGATTACGTTTGGTGGTCAGGTAAATAATTACAGGAACACAGTGCAACAAGTGGTGCAAATACTTGGAGATGAAAATTCTGCTGCTAATTATTTGAGCAAATGCATTTACTCAATTGGATTAGGCAGCAATGATTATCTCAATAATTATTTCATGCCTCAATATTACTCCACTAGCAGACAATTTAATCCTGATCAATATGCTGATGTTCTAATTCAACAATACTCTCAACAACTAAAG.......................................................................................................................ACTTTGTATGACTATGGAGCAAGGAAGTTTGTCTTAATTGGAGTGGGCCAAATTGGTTGTAGCCCAAATGCTCTAGCCCAAAACAGTCCTGATGGAAGAACCTGTGCAGAAAATATAAATAATGCAAACAAGTTGTTCAACAATAGGCTAAAGGGTATTGTGGATGAATTCAATGGCAATACACCAGATGCAAAATTCATCTACATCAATGCTTATGATATCTTCCAAGATTTAATTGACAATCCCTCAGCATTTG..............................................................................................GATTTAGAGTAACGAATGCTGGATGTTGTGGAGTAGGAAGGAATAACGGGCAAATAACATGTCTTCCACTACAAAATCCTTGCCAAAATAGAGATGAATATGTATTTTGGGATGCATTTCATCCAGGTGAAGCTGCAAATATAGTTGTTGGGAGAAGATCATATAGAGCTGAAAGATCATCAGATGCTTATCCTTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E345643" ref_strand="+" ref_description="SGN-E345643 [cTOF-18-I22]">
      <seq>ggtcaggtaaataattacaggaacacagtgcaacaagtggtgcaaatacttggagatgaaaattctgctgctaattatttgagcaaatgcatttactcaattggattaggcagcaatgattatctcaataattatttcatgcctcaatattactccactagcagacaatttaatcctgatcaatatgctgatgttctaattcaacaatactctcaacaactaaaggtgagtttgaatcacctgattaaaagtaatcgataaacatataacatgtttaaagtaaagtacttgcgttttaatattagagataatatcataaaagatctaattggcttttacatcagactttgtatgactatggagcaaggaagtttgtcttaattggagtgggccaaattggttgtagcccaaatgctctagcccaaaacagtcctgatggaagaacctgtgcagaaaatataaataatgcaaacaagttgttcaacaataggctaaagggtattgtggatgaattcaatggcaatacaccagatgcaaaattcatctacatcaatgcttatgatatcttccaagatttaattgacaatccctcagcatttggatttagagtaacgaatgctggatgttgtggagtaggaaggaataacgggcaaataacatgtcttccactacaaaatccttgccaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="+" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="104256" stop="105636"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="104556" g_stop="105155" g_length="600"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="600" r_length="600" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="105156" i_stop="105249" i_length="94">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="105250" g_stop="105336" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="601" r_stop="687" r_length="87" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="+" ref_id="SGN-E345643" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>687</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E345643" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="104556" e_stop="105155"/>
          <exon e_start="105250" e_stop="105336"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTCAGGTAAATAATTACAGGAACACAGTGCAACAAGTGGTGCAAATACTTGGAGATGAAAATTCTGCTGCTAATTATTTGAGCAAATGCATTTACTCAATTGGATTAGGCAGCAATGATTATCTCAATAATTATTTCATGCCTCAATATTACTCCACTAGCAGACAATTTAATCCTGATCAATATGCTGATGTTCTAATTCAACAATACTCTCAACAACTAAAGGTGAGTTTGAATCACCTGATTAAAAGTAATCGATAAACATATAACATGTTTAAAGTAAAGTACTTGCGTTTTAATATTAGAGATAATATCATAAAAGATCTAATTGGCTTTTACATCAGACTTTGTATGACTATGGAGCAAGGAAGTTTGTCTTAATTGGAGTGGGCCAAATTGGTTGTAGCCCAAATGCTCTAGCCCAAAACAGTCCTGATGGAAGAACCTGTGCAGAAAATATAAATAATGCAAACAAGTTGTTCAACAATAGGCTAAAGGGTATTGTGGATGAATTCAATGGCAATACACCAGATGCAAAATTCATCTACATCAATGCTTATGATATCTTCCAAGATTTAATTGACAATCCCTCAGCATTTGGTAAATATTTCTTTCTCATGCGAGTCATTTTTTTTTAATAAACAGACTTAAAAAAAAATAGTATTGACAAACTTGACTTTTTGACAATGTTCAGGATTTAGAGTAACGAATGCTGGATGTTGTGGAGTAGGAAGGAATAACGGGCAAATAACATGTCTTCCACTACAAAATCCTTGCCAAA</genome_strand>
        <mrna_strand>GGTCAGGTAAATAATTACAGGAACACAGTGCAACAAGTGGTGCAAATACTTGGAGATGAAAATTCTGCTGCTAATTATTTGAGCAAATGCATTTACTCAATTGGATTAGGCAGCAATGATTATCTCAATAATTATTTCATGCCTCAATATTACTCCACTAGCAGACAATTTAATCCTGATCAATATGCTGATGTTCTAATTCAACAATACTCTCAACAACTAAAGGTGAGTTTGAATCACCTGATTAAAAGTAATCGATAAACATATAACATGTTTAAAGTAAAGTACTTGCGTTTTAATATTAGAGATAATATCATAAAAGATCTAATTGGCTTTTACATCAGACTTTGTATGACTATGGAGCAAGGAAGTTTGTCTTAATTGGAGTGGGCCAAATTGGTTGTAGCCCAAATGCTCTAGCCCAAAACAGTCCTGATGGAAGAACCTGTGCAGAAAATATAAATAATGCAAACAAGTTGTTCAACAATAGGCTAAAGGGTATTGTGGATGAATTCAATGGCAATACACCAGATGCAAAATTCATCTACATCAATGCTTATGATATCTTCCAAGATTTAATTGACAATCCCTCAGCATTTG..............................................................................................GATTTAGAGTAACGAATGCTGGATGTTGTGGAGTAGGAAGGAATAACGGGCAAATAACATGTCTTCCACTACAAAATCCTTGCCAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E214301" ref_strand="-" ref_description="SGN-E214301 [cLEC-77-H20]">
      <seq>gctgctaatatttgagcaaatgcatttactcaattggattaggcagcaatgattatctcaataattatttcatgcctcaatattactccactagcagacaatttaatcctgatcaatatgctgatgttctaattcaacaatactctcaacaactaaagactttgtatgactatggagcaaggaagtttgtcttaattggagtgggccaaattggttgtagcccaaatgctctagcccaaaacagtcctgatggaagaacctgtgcagaaaatataaataatgcaaacaagttgttcaacaataggctaaagggtattgtggatgaattcaatggcaatacaccagatgcaaaattcatctacatcaatgcttatgatatcttccaagatttaattgacaatccctcagcatttggatttagagtaacgaatgctggatgttgtggagtaggaaggaataacgggcaaataacatgtcttccactacaaaatccttgccaaaatagagatgaatatgtattttgggatgcatttcatccaggtgaagctgcaaatatagttgttgggagaagatcatatagagctgaaagatcatcagatgcttatccttttgatattcagcgtttagctcaactatgaagataagagatgaagctaaaaatatatatatttttgtggaatttgtattattgtgttctatgatgtattatgagttgataataattaattttattatttgagaaatgttatggttactatgaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="+" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="104322" stop="105897"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="104622" g_stop="104780" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="158" r_length="158" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="104781" i_stop="104899" i_length="119">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.886" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="104900" g_stop="105155" g_length="256"/>
          <reference_exon_boundary r_type="cDNA" r_start="159" r_stop="414" r_length="256" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="105156" i_stop="105249" i_length="94">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="105250" g_stop="105601" g_length="352"/>
          <reference_exon_boundary r_type="cDNA" r_start="415" r_stop="766" r_length="352" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="+" ref_id="SGN-E214301" ref_strand="-">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>767</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E214301" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="104622" e_stop="104780"/>
          <exon e_start="104900" e_stop="105155"/>
          <exon e_start="105250" e_stop="105601"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTGCTAATTATTTGAGCAAATGCATTTACTCAATTGGATTAGGCAGCAATGATTATCTCAATAATTATTTCATGCCTCAATATTACTCCACTAGCAGACAATTTAATCCTGATCAATATGCTGATGTTCTAATTCAACAATACTCTCAACAACTAAAGGTGAGTTTGAATCACCTGATTAAAAGTAATCGATAAACATATAACATGTTTAAAGTAAAGTACTTGCGTTTTAATATTAGAGATAATATCATAAAAGATCTAATTGGCTTTTACATCAGACTTTGTATGACTATGGAGCAAGGAAGTTTGTCTTAATTGGAGTGGGCCAAATTGGTTGTAGCCCAAATGCTCTAGCCCAAAACAGTCCTGATGGAAGAACCTGTGCAGAAAATATAAATAATGCAAACAAGTTGTTCAACAATAGGCTAAAGGGTATTGTGGATGAATTCAATGGCAATACACCAGATGCAAAATTCATCTACATCAATGCTTATGATATCTTCCAAGATTTAATTGACAATCCCTCAGCATTTGGTAAATATTTCTTTCTCATGCGAGTCATTTTTTTTTAATAAACAGACTTAAAAAAAAATAGTATTGACAAACTTGACTTTTTGACAATGTTCAGGATTTAGAGTAACGAATGCTGGATGTTGTGGAGTAGGAAGGAATAACGGGCAAATAACATGTCTTCCACTACAAAATCCTTGCCAAAATAGAGATGAATATGTATTTTGGGATGCATTTCATCCAGGTGAAGCTGCAAATATAGTTGTTGGGAGAAGATCATATAGAGCTGAAAGATCATCAGATGCTTATCCTTTTGATATTCAGCGTTTAGCTCAACTATGAAGATAAGAGATGAAGCTAAAAATATATATATTTTTGTGGAATTTGTATTATTGTGTTCTATGATGTATTATGAGTTGATAATAATTAATTTTATTATTTGAGAAATGTTATGGTTACTATGACATGTG</genome_strand>
        <mrna_strand>GCTGCTAA-TATTTGAGCAAATGCATTTACTCAATTGGATTAGGCAGCAATGATTATCTCAATAATTATTTCATGCCTCAATATTACTCCACTAGCAGACAATTTAATCCTGATCAATATGCTGATGTTCTAATTCAACAATACTCTCAACAACTAAAG.......................................................................................................................ACTTTGTATGACTATGGAGCAAGGAAGTTTGTCTTAATTGGAGTGGGCCAAATTGGTTGTAGCCCAAATGCTCTAGCCCAAAACAGTCCTGATGGAAGAACCTGTGCAGAAAATATAAATAATGCAAACAAGTTGTTCAACAATAGGCTAAAGGGTATTGTGGATGAATTCAATGGCAATACACCAGATGCAAAATTCATCTACATCAATGCTTATGATATCTTCCAAGATTTAATTGACAATCCCTCAGCATTTG..............................................................................................GATTTAGAGTAACGAATGCTGGATGTTGTGGAGTAGGAAGGAATAACGGGCAAATAACATGTCTTCCACTACAAAATCCTTGCCAAAATAGAGATGAATATGTATTTTGGGATGCATTTCATCCAGGTGAAGCTGCAAATATAGTTGTTGGGAGAAGATCATATAGAGCTGAAAGATCATCAGATGCTTATCCTTTTGATATTCAGCGTTTAGCTCAACTATGAAGATAAGAGATGAAGCTAAAAATATATATATTTTTGTGGAATTTGTATTATTGTGTTCTATGATGTATTATGAGTTGATAATAATTAATTTTATTATTTGAGAAATGTTATGGTTACTATGAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E218545" ref_strand="+" ref_description="SGN-E218545 [cLEL-18-E6](-)">
      <seq>tgaattcaatggcaatacaccagatgcaaaattcatctacatcaatgcttatgatatcttccaagatttaattgacaatccctcagcatttggatttagagtaacgaatgctggatgttgtggagtaggaaggaataacgggcaaataacatgtcttccactacaaaatccttgccaaaatagagatgaatatgtattttgggatgcatttcatccaggtgaagctgcaaatatagttgttgggagaagatcatatagagctgaaagatcatcagatgcttacccttttgatattcagcgtttagctcaactatgaagataagagatgaagctaaaaatatatatatttttgtggaatttgtattattgtgttctatgatgtattatgagttgataataattaattttactatttgagaaatgttatggttcctaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="+" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="104764" stop="105897"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="105064" g_stop="105155" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="92" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="105156" i_stop="105249" i_length="94">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="105250" g_stop="105591" g_length="342"/>
          <reference_exon_boundary r_type="cDNA" r_start="93" r_stop="434" r_length="342" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="435" polyA_stop="454"/>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="+" ref_id="SGN-E218545" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>434</cumulative_length_of_scored_exons>
        <coverage percentage="0.956" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E218545" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="105064" e_stop="105155"/>
          <exon e_start="105250" e_stop="105591"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAATTCAATGGCAATACACCAGATGCAAAATTCATCTACATCAATGCTTATGATATCTTCCAAGATTTAATTGACAATCCCTCAGCATTTGGTAAATATTTCTTTCTCATGCGAGTCATTTTTTTTTAATAAACAGACTTAAAAAAAAATAGTATTGACAAACTTGACTTTTTGACAATGTTCAGGATTTAGAGTAACGAATGCTGGATGTTGTGGAGTAGGAAGGAATAACGGGCAAATAACATGTCTTCCACTACAAAATCCTTGCCAAAATAGAGATGAATATGTATTTTGGGATGCATTTCATCCAGGTGAAGCTGCAAATATAGTTGTTGGGAGAAGATCATATAGAGCTGAAAGATCATCAGATGCTTATCCTTTTGATATTCAGCGTTTAGCTCAACTATGAAGATAAGAGATGAAGCTAAAAATATATATATTTTTGTGGAATTTGTATTATTGTGTTCTATGATGTATTATGAGTTGATAATAATTAATTTTATTATTTGAGAAATGTTATGGTTACT</genome_strand>
        <mrna_strand>TGAATTCAATGGCAATACACCAGATGCAAAATTCATCTACATCAATGCTTATGATATCTTCCAAGATTTAATTGACAATCCCTCAGCATTTG..............................................................................................GATTTAGAGTAACGAATGCTGGATGTTGTGGAGTAGGAAGGAATAACGGGCAAATAACATGTCTTCCACTACAAAATCCTTGCCAAAATAGAGATGAATATGTATTTTGGGATGCATTTCATCCAGGTGAAGCTGCAAATATAGTTGTTGGGAGAAGATCATATAGAGCTGAAAGATCATCAGATGCTTACCCTTTTGATATTCAGCGTTTAGCTCAACTATGAAGATAAGAGATGAAGCTAAAAATATATATATTTTTGTGGAATTTGTATTATTGTGTTCTATGATGTATTATGAGTTGATAATAATTAATTTTACTATTTGAGAAATGTTATGGTTCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E218953" ref_strand="+" ref_description="SGN-E218953 [cLEL-18-E6](-)">
      <seq>aatgcttatgaaatcttccaagatttaattgccaatccctcagcatttggatttagagtaacgaatgctggatgttgtggagtagaaaggaataacgggcaaataacatgtcttccactacaaaatccttgccaaaatagagatgaatatgtattttgggatgcatttcatccaggtgaagctgcaaatatagttgttgggagaagatcatatagagctgaaagatcatcagatgcttacccttttgatattcagcgtttagctcaactatgaagataagagatgaagctaaaaatatatatatttttgtggaatttgtattattgtgttctatgatgtattatgagttgataataattaattttattatttgagaaatgttatggttcctaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="+" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="104807" stop="105897"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="105107" g_stop="105155" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="49" r_length="49" r_score="0.959"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="105156" i_stop="105249" i_length="94">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="105250" g_stop="105591" g_length="342"/>
          <reference_exon_boundary r_type="cDNA" r_start="50" r_stop="391" r_length="342" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="392" polyA_stop="411"/>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="+" ref_id="SGN-E218953" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>391</cumulative_length_of_scored_exons>
        <coverage percentage="0.951" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E218953" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="105107" e_stop="105155"/>
          <exon e_start="105250" e_stop="105591"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATGCTTATGATATCTTCCAAGATTTAATTGACAATCCCTCAGCATTTGGTAAATATTTCTTTCTCATGCGAGTCATTTTTTTTTAATAAACAGACTTAAAAAAAAATAGTATTGACAAACTTGACTTTTTGACAATGTTCAGGATTTAGAGTAACGAATGCTGGATGTTGTGGAGTAGGAAGGAATAACGGGCAAATAACATGTCTTCCACTACAAAATCCTTGCCAAAATAGAGATGAATATGTATTTTGGGATGCATTTCATCCAGGTGAAGCTGCAAATATAGTTGTTGGGAGAAGATCATATAGAGCTGAAAGATCATCAGATGCTTATCCTTTTGATATTCAGCGTTTAGCTCAACTATGAAGATAAGAGATGAAGCTAAAAATATATATATTTTTGTGGAATTTGTATTATTGTGTTCTATGATGTATTATGAGTTGATAATAATTAATTTTATTATTTGAGAAATGTTATGGTTACT</genome_strand>
        <mrna_strand>AATGCTTATGAAATCTTCCAAGATTTAATTGCCAATCCCTCAGCATTTG..............................................................................................GATTTAGAGTAACGAATGCTGGATGTTGTGGAGTAGAAAGGAATAACGGGCAAATAACATGTCTTCCACTACAAAATCCTTGCCAAAATAGAGATGAATATGTATTTTGGGATGCATTTCATCCAGGTGAAGCTGCAAATATAGTTGTTGGGAGAAGATCATATAGAGCTGAAAGATCATCAGATGCTTACCCTTTTGATATTCAGCGTTTAGCTCAACTATGAAGATAAGAGATGAAGCTAAAAATATATATATTTTTGTGGAATTTGTATTATTGTGTTCTATGATGTATTATGAGTTGATAATAATTAATTTTATTATTTGAGAAATGTTATGGTTCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E745380" ref_strand="+" ref_description="SGN-E745380 [GI|47105698]">
      <seq>gatcccactactcattactttaactaactacttagcctagctacttctaaagctaagggtctcaaaaatgggtagtgagatgaggagatgtatattggtggtgcttttagggtttatgagtttgggagattattatgaaacaaatgcacaacaagtgccttgttatttcatatttggtgattctttggttggtaatgggaataacaacaatattcagtcattggctaaggctaactacttgccttatggtattgatttctctggaggtccaactgggagattctctaatggaaaaactactgttgatgtcattgcggaacaattggggttcaatggtaatattccaccctatgcaactgctaggggcagagatgttctcagaggtgtcaattatgcttctgcagctgctggaattagagatgaaactggcagacaattgggaggaagaattagtttttctggacaagtgaataattacaggaacacagtgcaacaagtggtgcaaatattaggaaatgaaaatgcagctgctgattatcttaaaaaatgcatttactcagttggattaggcagcaatgattatctcaataattattttatgcctctttattatcccaccagcagacagttcactcctgatcaatatgctactgttcttattcaacaatatactcaacaactaaagattttatatagtaatggagcaaggaagtttgctttgattggagtgggccagatagggtgcagcccaaatgcattggcccaaaacagcccagatgggagaacttgtgtacaaagaatcaatgtagcaaatcaattattcaacaataaactcaaggcacttgttgataatttgaatggaaatacacctgatgcaaaattcatctacattgatgcttatggaatcttccaagacttaattgaaaatcctgctgcctttggatttagagtgacaaatgccggatgttgtggggtagggaggaacaacggacaaattacgtgtcttcctttccaaaggccatgcagaaataggaatgaatatctattttgggatgcatttcatccaactgaagctgcaaatatagttgtcgggaggagatcatatagagctcaaaaatcatctgatgcgtatccttatgatattagtcgtctagctcaagcttgattaaatatcaaatactctatatattaattattgtggaattgacatctttaattactataagatgtaatcacaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="+" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="108733" stop="111411"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="109032" g_stop="109345" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="314" r_length="314" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="109346" i_stop="109897" i_length="552">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="109898" g_stop="110022" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="315" r_stop="439" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="110023" i_stop="110114" i_length="92">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="110115" g_stop="110360" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="440" r_stop="685" r_length="246" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="110361" i_stop="110470" i_length="110">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.850" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="110471" g_stop="110726" g_length="256"/>
          <reference_exon_boundary r_type="cDNA" r_start="686" r_stop="941" r_length="256" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="110727" i_stop="110814" i_length="88">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="110815" g_stop="111111" g_length="297"/>
          <reference_exon_boundary r_type="cDNA" r_start="942" r_stop="1238" r_length="297" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1239" polyA_stop="1251"/>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="+" ref_id="SGN-E745380" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1238</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E745380" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="109032" e_stop="109345"/>
          <exon e_start="109898" e_stop="110022"/>
          <exon e_start="110115" e_stop="110360"/>
          <exon e_start="110471" e_stop="110726"/>
          <exon e_start="110815" e_stop="111111"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATCCCACTACTCATTACTTTAACTAACTACTTAGCCTAGCTACTTCTAAAGCTAAGGGTCTCAAAAATGGGTAGTGAGATGAGGAGATGTATATTGGTGGTGCTTTTAGGGTTTATGAGTTTGGGAGATTATTATGAAACAAATGCACAACAAGTGCCTTGTTATTTCATATTTGGTGATTCTTTGGTTGATAATGGGAATAACAACAATATTCAGTCATTGGCTAAGGCTAACTACTTGCCTTATGGTATTGATTTCTCTGGAGGTCCAACTGGGAGATTCTCTAATGGAAAAACTACTGTTGATGTCATTGGTAACACATGATTTCTTTTCTTTGTTTGTAAGGAGTGGATTCAGAATTTTAAGATAGTGAATAAACTTTTTTTTAAAATTATTGGAACTTTTACTATAGTATGATTTTGCACGTGCACCTGTTAATACCTATATGGTGAATTTGTTACTTTACGATATGAAATATTTAGTTTTGATTTGATATGAAGTTATTGAAAATATACAGTAGGGCTAATTCAAATAAGCAAAATTTGTTACAAATTTGTGTTTGGGATCCAATGTGTATGAAATTATGTTAATTAGTATTACATCATAAAATCAAATTCAAATCATATCTATTTTCTTTAAACTTGTACACTAATATCTCTTGCTCCTTTTATGATATATAACAAATTCATCTTTTGGTAATAAGAAATTTCATATATATGTTAGAATTCACCAAGCACCTTTGTCCCTAATATCAAAGGTGATCGTATTGATAAAAGTTAGAGTTGGAGGTGGAGGATGCTTATTATCCGAGACTCATGTTATCTGCTAGAATAAAATTTGAGATTAATTATGTTACATTTTACAGCGGAACAATTGGGGTTCAATGGTAATATTCCACCCTATGCAACTGCTAGGGGCAGAGATGTTCTCAGAGGTGTCAATTATGCTTCTGCAGCTGCTGGAATTAGAGATGAAACTGGCAGACAATTGGTACTACATTCATTTTTATTCTACTTATTTTTTAAAACAATTTTTTTTTGGTTTAATTAAAATTTGTTAAACTTTTAATGAAATTTTTATAGGGAGGAAGAATTAGTTTTTCTGGACAAGTGAATAATTACAGGAACACAGTGCAACAAGTGGTGCAAATATTAGGAAATGAAAATGCAGCTGCTGATTATCTTAAAAAATGCATTTACTCAGTTGGATTAGGCAGCAATGATTATCTCAATAATTATTTTATGCCTCTTTATTATCCCACCAGCAGACAGTTCACTCCTGATCAATATGCTACTGTTCTTATTCAACAATATACTCAACAACTAAAGGTAAGTTGTATCCCTCCTCTTCTATTCACTTTTATTTGTCTACTCGCTCTTCAAAAAAAAAAAAAACAATCACTTCTTATTAATAATTATATGTTTTCTGGTGATCCTAGATTTTATATAGTAATGGAGCAAGGAAGTTTGCTTTGATTGGAGTGGGCCAGATAGGGTGCAGCCCAAATGCATTGGCCCAAAACAGCCCAGATGGGAGAACTTGTGTACAAAGAATCAATGTAGCAAATCAATTATTCAACAATAAACTCAAGGCACTTGTTGATAATTTGAATGGAAATACACCTGATGCAAAATTCATCTACATTGATGCTTATGGAATCTTCCAAGACTTAATTGAAAATCCTGCTGCCTTTGGTAATATTTTTCAATATTTCTAATTCTCCCCTTACATTTTCATATGTTTTTTTTTTTTTAATTATTCGACTCTACTAATTAATTTCAGGATTTAGAGTGACAAATGCCGGATGTTGTGGGGTAGGGAGGAACAACGGACAAATTACGTGTCTTCCTTTCCAAAGGCCATGCAGAAATAGGAATGAATATCTATTTTGGGATGCATTTCATCCAACTGAAGCTGCAAATATAGTTGTCGGGAGGAGATCATATAGAGCTCAAAAATCATCTGATGCATATCCTTATGATATTAGTCGTCTAGCTCAAGCTTGATTAAATATCAAATACTCTATATATTAATTATTGTGGAATTGACATCTTTAATTACTATAAGATGTAATCACAA</genome_strand>
        <mrna_strand>GATCCCACTACTCATTACTTTAACTAACTACTTAGCCTAGCTACTTCTAAAGCTAAGGGTCTCAAAAATGGGTAGTGAGATGAGGAGATGTATATTGGTGGTGCTTTTAGGGTTTATGAGTTTGGGAGATTATTATGAAACAAATGCACAACAAGTGCCTTGTTATTTCATATTTGGTGATTCTTTGGTTGGTAATGGGAATAACAACAATATTCAGTCATTGGCTAAGGCTAACTACTTGCCTTATGGTATTGATTTCTCTGGAGGTCCAACTGGGAGATTCTCTAATGGAAAAACTACTGTTGATGTCATTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAACAATTGGGGTTCAATGGTAATATTCCACCCTATGCAACTGCTAGGGGCAGAGATGTTCTCAGAGGTGTCAATTATGCTTCTGCAGCTGCTGGAATTAGAGATGAAACTGGCAGACAATTG............................................................................................GGAGGAAGAATTAGTTTTTCTGGACAAGTGAATAATTACAGGAACACAGTGCAACAAGTGGTGCAAATATTAGGAAATGAAAATGCAGCTGCTGATTATCTTAAAAAATGCATTTACTCAGTTGGATTAGGCAGCAATGATTATCTCAATAATTATTTTATGCCTCTTTATTATCCCACCAGCAGACAGTTCACTCCTGATCAATATGCTACTGTTCTTATTCAACAATATACTCAACAACTAAAG..............................................................................................................ATTTTATATAGTAATGGAGCAAGGAAGTTTGCTTTGATTGGAGTGGGCCAGATAGGGTGCAGCCCAAATGCATTGGCCCAAAACAGCCCAGATGGGAGAACTTGTGTACAAAGAATCAATGTAGCAAATCAATTATTCAACAATAAACTCAAGGCACTTGTTGATAATTTGAATGGAAATACACCTGATGCAAAATTCATCTACATTGATGCTTATGGAATCTTCCAAGACTTAATTGAAAATCCTGCTGCCTTTG........................................................................................GATTTAGAGTGACAAATGCCGGATGTTGTGGGGTAGGGAGGAACAACGGACAAATTACGTGTCTTCCTTTCCAAAGGCCATGCAGAAATAGGAATGAATATCTATTTTGGGATGCATTTCATCCAACTGAAGCTGCAAATATAGTTGTCGGGAGGAGATCATATAGAGCTCAAAAATCATCTGATGCGTATCCTTATGATATTAGTCGTCTAGCTCAAGCTTGATTAAATATCAAATACTCTATATATTAATTATTGTGGAATTGACATCTTTAATTACTATAAGATGTAATCACAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E365885" ref_strand="+" ref_description="SGN-E365885 [cLPT-11-G12]">
      <seq>tacttagcctagctacttctaaagctaagggtctcaaaaatgggtagtgagatgaggagatgtatattggtggtgcttttagggtttatgagtttgggagattattatgaaacaaatgcacaacaagtgccttgttatttcatatttggtgattctttggttgataatgggaataacaacaatattcagtcattggctaaggctaactacttgccttatggtattgatttctctggaggtccaactgggagattctctaatggaaaaactactgttgatgtcattgcggaacaattggggttcaatggtaatattccaccctatgcaactgctaggggcagagatgttctcagaggtgtcaattatgcttctgcagctgctggaattagagatgaaactggcagacaattgagaggaagaattagtttttctggacaagtgaataattacaagaacacagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="+" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="108760" stop="110464"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="109060" g_stop="109345" g_length="286"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="286" r_length="286" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="109346" i_stop="109897" i_length="552">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="109898" g_stop="110022" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="287" r_stop="411" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="110023" i_stop="110114" i_length="92">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="110115" g_stop="110164" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="412" r_stop="461" r_length="50" r_score="0.960"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="+" ref_id="SGN-E365885" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>461</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E365885" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="109060" e_stop="109345"/>
          <exon e_start="109898" e_stop="110022"/>
          <exon e_start="110115" e_stop="110164"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACTTAGCCTAGCTACTTCTAAAGCTAAGGGTCTCAAAAATGGGTAGTGAGATGAGGAGATGTATATTGGTGGTGCTTTTAGGGTTTATGAGTTTGGGAGATTATTATGAAACAAATGCACAACAAGTGCCTTGTTATTTCATATTTGGTGATTCTTTGGTTGATAATGGGAATAACAACAATATTCAGTCATTGGCTAAGGCTAACTACTTGCCTTATGGTATTGATTTCTCTGGAGGTCCAACTGGGAGATTCTCTAATGGAAAAACTACTGTTGATGTCATTGGTAACACATGATTTCTTTTCTTTGTTTGTAAGGAGTGGATTCAGAATTTTAAGATAGTGAATAAACTTTTTTTTAAAATTATTGGAACTTTTACTATAGTATGATTTTGCACGTGCACCTGTTAATACCTATATGGTGAATTTGTTACTTTACGATATGAAATATTTAGTTTTGATTTGATATGAAGTTATTGAAAATATACAGTAGGGCTAATTCAAATAAGCAAAATTTGTTACAAATTTGTGTTTGGGATCCAATGTGTATGAAATTATGTTAATTAGTATTACATCATAAAATCAAATTCAAATCATATCTATTTTCTTTAAACTTGTACACTAATATCTCTTGCTCCTTTTATGATATATAACAAATTCATCTTTTGGTAATAAGAAATTTCATATATATGTTAGAATTCACCAAGCACCTTTGTCCCTAATATCAAAGGTGATCGTATTGATAAAAGTTAGAGTTGGAGGTGGAGGATGCTTATTATCCGAGACTCATGTTATCTGCTAGAATAAAATTTGAGATTAATTATGTTACATTTTACAGCGGAACAATTGGGGTTCAATGGTAATATTCCACCCTATGCAACTGCTAGGGGCAGAGATGTTCTCAGAGGTGTCAATTATGCTTCTGCAGCTGCTGGAATTAGAGATGAAACTGGCAGACAATTGGTACTACATTCATTTTTATTCTACTTATTTTTTAAAACAATTTTTTTTTGGTTTAATTAAAATTTGTTAAACTTTTAATGAAATTTTTATAGGGAGGAAGAATTAGTTTTTCTGGACAAGTGAATAATTACAGGAACACAGT</genome_strand>
        <mrna_strand>TACTTAGCCTAGCTACTTCTAAAGCTAAGGGTCTCAAAAATGGGTAGTGAGATGAGGAGATGTATATTGGTGGTGCTTTTAGGGTTTATGAGTTTGGGAGATTATTATGAAACAAATGCACAACAAGTGCCTTGTTATTTCATATTTGGTGATTCTTTGGTTGATAATGGGAATAACAACAATATTCAGTCATTGGCTAAGGCTAACTACTTGCCTTATGGTATTGATTTCTCTGGAGGTCCAACTGGGAGATTCTCTAATGGAAAAACTACTGTTGATGTCATTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAACAATTGGGGTTCAATGGTAATATTCCACCCTATGCAACTGCTAGGGGCAGAGATGTTCTCAGAGGTGTCAATTATGCTTCTGCAGCTGCTGGAATTAGAGATGAAACTGGCAGACAATTG............................................................................................AGAGGAAGAATTAGTTTTTCTGGACAAGTGAATAATTACAAGAACACAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E236486" ref_strand="+" ref_description="SGN-E236486 [cLED-13-J12]">
      <seq>gagattctctaatggaaaaactactgttgatgtcattgcggaacaattggggttcaatggtaatattccaccctatgcaactgctaggggcagagatgttctcagaggtgtcaattatgcttctgcagctgctggaattagagatgaaactggcagacaattgggaggaagaattagtttttctggacaagtgaataattacaggaacacagtgcaacaagtggtgcaaatattaggaaatgaaaatgcagctgctgattatcttaaaaaatgcatttactcagttggattaggcagcaatgattatctcaataattattttatgcctctttattatcccaccagcagacagttcactcctgatcaatatgctactgttcttattcaacaatatactcaacaactaaagattttatatagtaatggagcaaggaagtttgctttgattggagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="+" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="109008" stop="110814"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="109308" g_stop="109345" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="38" r_length="38" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="109346" i_stop="109897" i_length="552">
            <donor d_prob="0.991" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="109898" g_stop="110022" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="39" r_stop="163" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="110023" i_stop="110114" i_length="92">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="110115" g_stop="110360" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="164" r_stop="409" r_length="246" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="110361" i_stop="110470" i_length="110">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.850" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="110471" g_stop="110514" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="410" r_stop="453" r_length="44" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="+" ref_id="SGN-E236486" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>453</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E236486" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="109308" e_stop="109345"/>
          <exon e_start="109898" e_stop="110022"/>
          <exon e_start="110115" e_stop="110360"/>
          <exon e_start="110471" e_stop="110514"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGATTCTCTAATGGAAAAACTACTGTTGATGTCATTGGTAACACATGATTTCTTTTCTTTGTTTGTAAGGAGTGGATTCAGAATTTTAAGATAGTGAATAAACTTTTTTTTAAAATTATTGGAACTTTTACTATAGTATGATTTTGCACGTGCACCTGTTAATACCTATATGGTGAATTTGTTACTTTACGATATGAAATATTTAGTTTTGATTTGATATGAAGTTATTGAAAATATACAGTAGGGCTAATTCAAATAAGCAAAATTTGTTACAAATTTGTGTTTGGGATCCAATGTGTATGAAATTATGTTAATTAGTATTACATCATAAAATCAAATTCAAATCATATCTATTTTCTTTAAACTTGTACACTAATATCTCTTGCTCCTTTTATGATATATAACAAATTCATCTTTTGGTAATAAGAAATTTCATATATATGTTAGAATTCACCAAGCACCTTTGTCCCTAATATCAAAGGTGATCGTATTGATAAAAGTTAGAGTTGGAGGTGGAGGATGCTTATTATCCGAGACTCATGTTATCTGCTAGAATAAAATTTGAGATTAATTATGTTACATTTTACAGCGGAACAATTGGGGTTCAATGGTAATATTCCACCCTATGCAACTGCTAGGGGCAGAGATGTTCTCAGAGGTGTCAATTATGCTTCTGCAGCTGCTGGAATTAGAGATGAAACTGGCAGACAATTGGTACTACATTCATTTTTATTCTACTTATTTTTTAAAACAATTTTTTTTTGGTTTAATTAAAATTTGTTAAACTTTTAATGAAATTTTTATAGGGAGGAAGAATTAGTTTTTCTGGACAAGTGAATAATTACAGGAACACAGTGCAACAAGTGGTGCAAATATTAGGAAATGAAAATGCAGCTGCTGATTATCTTAAAAAATGCATTTACTCAGTTGGATTAGGCAGCAATGATTATCTCAATAATTATTTTATGCCTCTTTATTATCCCACCAGCAGACAGTTCACTCCTGATCAATATGCTACTGTTCTTATTCAACAATATACTCAACAACTAAAGGTAAGTTGTATCCCTCCTCTTCTATTCACTTTTATTTGTCTACTCGCTCTTCAAAAAAAAAAAAAACAATCACTTCTTATTAATAATTATATGTTTTCTGGTGATCCTAGATTTTATATAGTAATGGAGCAAGGAAGTTTGCTTTGATTGGAGT</genome_strand>
        <mrna_strand>GAGATTCTCTAATGGAAAAACTACTGTTGATGTCATTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAACAATTGGGGTTCAATGGTAATATTCCACCCTATGCAACTGCTAGGGGCAGAGATGTTCTCAGAGGTGTCAATTATGCTTCTGCAGCTGCTGGAATTAGAGATGAAACTGGCAGACAATTG............................................................................................GGAGGAAGAATTAGTTTTTCTGGACAAGTGAATAATTACAGGAACACAGTGCAACAAGTGGTGCAAATATTAGGAAATGAAAATGCAGCTGCTGATTATCTTAAAAAATGCATTTACTCAGTTGGATTAGGCAGCAATGATTATCTCAATAATTATTTTATGCCTCTTTATTATCCCACCAGCAGACAGTTCACTCCTGATCAATATGCTACTGTTCTTATTCAACAATATACTCAACAACTAAAG..............................................................................................................ATTTTATATAGTAATGGAGCAAGGAAGTTTGCTTTGATTGGAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E240535" ref_strand="+" ref_description="SGN-E240535 [cLED-21-I15]">
      <seq>atggaaaaactactgttgatgtcattgcggaacaattggggttcaatggtaatattccaccctatgcaactgctaggggcagagatgttctcagaggtgtcaattatgcttctgcagctgctggaattagagatgaaactggcagacaattgggaggaagaattattttttctggacaagtgaataattacaggaacacagtgcaacaagtggtgcaaatattatgaaatgaaaatgcagctgctgattatcttaaaaaaatgcatttactcagttggattaggcagcaatgattattctcaataattatttaatgcctctttattatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="+" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="109571" stop="110589"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="109898" g_stop="110022" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="28" r_stop="152" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="110023" i_stop="110114" i_length="92">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="110115" g_stop="110289" g_length="175"/>
          <reference_exon_boundary r_type="cDNA" r_start="153" r_stop="329" r_length="177" r_score="0.960"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="+" ref_id="SGN-E240535" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>300</cumulative_length_of_scored_exons>
        <coverage percentage="0.912" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E240535" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="109898" e_stop="110022"/>
          <exon e_start="110115" e_stop="110289"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGAACAATTGGGGTTCAATGGTAATATTCCACCCTATGCAACTGCTAGGGGCAGAGATGTTCTCAGAGGTGTCAATTATGCTTCTGCAGCTGCTGGAATTAGAGATGAAACTGGCAGACAATTGGTACTACATTCATTTTTATTCTACTTATTTTTTAAAACAATTTTTTTTTGGTTTAATTAAAATTTGTTAAACTTTTAATGAAATTTTTATAGGGAGGAAGAATTAGTTTTTCTGGACAAGTGAATAATTACAGGAACACAGTGCAACAAGTGGTGCAAATATTAGGAAATGAAAATGCAGCTGCTGATTATCTT-AAAAAATGCATTTACTCAGTTGGATTAGGCAGCAATGATTA-TCTCAATAATTATTTTATGCCTCTTTATTATC</genome_strand>
        <mrna_strand>CGGAACAATTGGGGTTCAATGGTAATATTCCACCCTATGCAACTGCTAGGGGCAGAGATGTTCTCAGAGGTGTCAATTATGCTTCTGCAGCTGCTGGAATTAGAGATGAAACTGGCAGACAATTG............................................................................................GGAGGAAGAATTATTTTTTCTGGACAAGTGAATAATTACAGGAACACAGTGCAACAAGTGGTGCAAATATTATGAAATGAAAATGCAGCTGCTGATTATCTTAAAAAAATGCATTTACTCAGTTGGATTAGGCAGCAATGATTATTCTCAATAATTATTTAATGCCTCTTTATTATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E236306" ref_strand="+" ref_description="SGN-E236306 [cLED-20-F19]">
      <seq>atatactcaacaactaaagattttatatagtaatggagcaaggaagtttgctttgattggagtgggccagatagggtgcagcccaaatgcattggcccaaaacagcccagatgggagaacttgtgtacaaagaatcaatgtagcaaatcaattattcaacaataaactcaaggcacttgttgataatttgaatggaaatacacctgatgcaaaattcatctacattgatgcttatggaatcttccaagacttaattgaaaatcctgctgcctttggatttagagtgacaaatgccggatgttgtggggtagggaggaacaacggacaaattacgtgtcttcctttccaaaggccatgcagaaataggaatgaatatctattttgggatgcatttcatccaactgaagctgcaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="+" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="110042" stop="111253"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="110342" g_stop="110360" g_length="19"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="19" r_length="19" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="110361" i_stop="110470" i_length="110">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.850" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="110471" g_stop="110726" g_length="256"/>
          <reference_exon_boundary r_type="cDNA" r_start="20" r_stop="275" r_length="256" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="110727" i_stop="110814" i_length="88">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="110815" g_stop="110953" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="276" r_stop="414" r_length="139" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="+" ref_id="SGN-E236306" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>414</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E236306" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="110342" e_stop="110360"/>
          <exon e_start="110471" e_stop="110726"/>
          <exon e_start="110815" e_stop="110953"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATATACTCAACAACTAAAGGTAAGTTGTATCCCTCCTCTTCTATTCACTTTTATTTGTCTACTCGCTCTTCAAAAAAAAAAAAAACAATCACTTCTTATTAATAATTATATGTTTTCTGGTGATCCTAGATTTTATATAGTAATGGAGCAAGGAAGTTTGCTTTGATTGGAGTGGGCCAGATAGGGTGCAGCCCAAATGCATTGGCCCAAAACAGCCCAGATGGGAGAACTTGTGTACAAAGAATCAATGTAGCAAATCAATTATTCAACAATAAACTCAAGGCACTTGTTGATAATTTGAATGGAAATACACCTGATGCAAAATTCATCTACATTGATGCTTATGGAATCTTCCAAGACTTAATTGAAAATCCTGCTGCCTTTGGTAATATTTTTCAATATTTCTAATTCTCCCCTTACATTTTCATATGTTTTTTTTTTTTTAATTATTCGACTCTACTAATTAATTTCAGGATTTAGAGTGACAAATGCCGGATGTTGTGGGGTAGGGAGGAACAACGGACAAATTACGTGTCTTCCTTTCCAAAGGCCATGCAGAAATAGGAATGAATATCTATTTTGGGATGCATTTCATCCAACTGAAGCTGCAAA</genome_strand>
        <mrna_strand>ATATACTCAACAACTAAAG..............................................................................................................ATTTTATATAGTAATGGAGCAAGGAAGTTTGCTTTGATTGGAGTGGGCCAGATAGGGTGCAGCCCAAATGCATTGGCCCAAAACAGCCCAGATGGGAGAACTTGTGTACAAAGAATCAATGTAGCAAATCAATTATTCAACAATAAACTCAAGGCACTTGTTGATAATTTGAATGGAAATACACCTGATGCAAAATTCATCTACATTGATGCTTATGGAATCTTCCAAGACTTAATTGAAAATCCTGCTGCCTTTG........................................................................................GATTTAGAGTGACAAATGCCGGATGTTGTGGGGTAGGGAGGAACAACGGACAAATTACGTGTCTTCCTTTCCAAAGGCCATGCAGAAATAGGAATGAATATCTATTTTGGGATGCATTTCATCCAACTGAAGCTGCAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E240015" ref_strand="+" ref_description="SGN-E240015 [cLED-29-N10]">
      <seq>atatactcaacaactaaagattttatatagtaatggagcaaggaagtttgctttgattggagtgggccagatagggtgcagcccaaatgcattggcccaaaacagcccagatgggagaacttgtgtacaaagaatcaatgtagcaaatcaattattcaacaataaactcaaggcacttgttgataatttgaatggaaatacacctgatgcaaaattcatctacattgatgcttatggaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="+" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="110042" stop="110990"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="110342" g_stop="110360" g_length="19"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="19" r_length="19" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="110361" i_stop="110470" i_length="110">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.850" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="110471" g_stop="110690" g_length="220"/>
          <reference_exon_boundary r_type="cDNA" r_start="20" r_stop="239" r_length="220" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="+" ref_id="SGN-E240015" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>239</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E240015" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="110342" e_stop="110360"/>
          <exon e_start="110471" e_stop="110690"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATATACTCAACAACTAAAGGTAAGTTGTATCCCTCCTCTTCTATTCACTTTTATTTGTCTACTCGCTCTTCAAAAAAAAAAAAAACAATCACTTCTTATTAATAATTATATGTTTTCTGGTGATCCTAGATTTTATATAGTAATGGAGCAAGGAAGTTTGCTTTGATTGGAGTGGGCCAGATAGGGTGCAGCCCAAATGCATTGGCCCAAAACAGCCCAGATGGGAGAACTTGTGTACAAAGAATCAATGTAGCAAATCAATTATTCAACAATAAACTCAAGGCACTTGTTGATAATTTGAATGGAAATACACCTGATGCAAAATTCATCTACATTGATGCTTATGGAA</genome_strand>
        <mrna_strand>ATATACTCAACAACTAAAG..............................................................................................................ATTTTATATAGTAATGGAGCAAGGAAGTTTGCTTTGATTGGAGTGGGCCAGATAGGGTGCAGCCCAAATGCATTGGCCCAAAACAGCCCAGATGGGAGAACTTGTGTACAAAGAATCAATGTAGCAAATCAATTATTCAACAATAAACTCAAGGCACTTGTTGATAATTTGAATGGAAATACACCTGATGCAAAATTCATCTACATTGATGCTTATGGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E250859" ref_strand="-" ref_description="SGN-E250859 [cLEG-13-H19]">
      <seq>gcccagatgggagaacttgtgtacaaagaatcaatgtagcaaatcaattattcaacaataaactcaaggcacttgttgataatttgaatggaaatacacctgatgcaaaattcatctacattgatgcttatggaatcttccaagacttaattgaaaatcctgctgcctttggatttagagtgacaaatgccggatgttgtggggtagggaggaacaacggacaaattacgtgtcttcctttccaaaggccatgcagaaataggaatgaatatctattttgggatgcatttcatccaactgaagctgcaaatatagttgtcgggaggagatcatatagagctcaaaaatcatctgatgcatatccttatgatattagtcgtctagctcaagcttgattaaatatcaaatactctatatattaattattgtggaattgacatcttaaattactataa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="+" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="110256" stop="111398"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="110556" g_stop="110726" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="171" r_length="171" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="110727" i_stop="110814" i_length="88">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="110815" g_stop="111098" g_length="284"/>
          <reference_exon_boundary r_type="cDNA" r_start="172" r_stop="455" r_length="284" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="+" ref_id="SGN-E250859" ref_strand="-">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>455</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E250859" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="110556" e_stop="110726"/>
          <exon e_start="110815" e_stop="111098"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCCAGATGGGAGAACTTGTGTACAAAGAATCAATGTAGCAAATCAATTATTCAACAATAAACTCAAGGCACTTGTTGATAATTTGAATGGAAATACACCTGATGCAAAATTCATCTACATTGATGCTTATGGAATCTTCCAAGACTTAATTGAAAATCCTGCTGCCTTTGGTAATATTTTTCAATATTTCTAATTCTCCCCTTACATTTTCATATGTTTTTTTTTTTTTAATTATTCGACTCTACTAATTAATTTCAGGATTTAGAGTGACAAATGCCGGATGTTGTGGGGTAGGGAGGAACAACGGACAAATTACGTGTCTTCCTTTCCAAAGGCCATGCAGAAATAGGAATGAATATCTATTTTGGGATGCATTTCATCCAACTGAAGCTGCAAATATAGTTGTCGGGAGGAGATCATATAGAGCTCAAAAATCATCTGATGCATATCCTTATGATATTAGTCGTCTAGCTCAAGCTTGATTAAATATCAAATACTCTATATATTAATTATTGTGGAATTGACATCTTTAATTACTATAA</genome_strand>
        <mrna_strand>GCCCAGATGGGAGAACTTGTGTACAAAGAATCAATGTAGCAAATCAATTATTCAACAATAAACTCAAGGCACTTGTTGATAATTTGAATGGAAATACACCTGATGCAAAATTCATCTACATTGATGCTTATGGAATCTTCCAAGACTTAATTGAAAATCCTGCTGCCTTTG........................................................................................GATTTAGAGTGACAAATGCCGGATGTTGTGGGGTAGGGAGGAACAACGGACAAATTACGTGTCTTCCTTTCCAAAGGCCATGCAGAAATAGGAATGAATATCTATTTTGGGATGCATTTCATCCAACTGAAGCTGCAAATATAGTTGTCGGGAGGAGATCATATAGAGCTCAAAAATCATCTGATGCATATCCTTATGATATTAGTCGTCTAGCTCAAGCTTGATTAAATATCAAATACTCTATATATTAATTATTGTGGAATTGACATCTTAAATTACTATAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E279303" ref_strand="+" ref_description="SGN-E279303 [cLEL-4-H17](-)">
      <seq>gacttaattgaaaatcctgctgcctttggatttagagtgacaaatgccggatgttgtggggtagggaggaacaacggacaaattacgtgtcttcctttccaaaggccatgcagaaataggaatgaatatctattttgggatgcatttcatccaactgaagctgcaaatatagttgtcgggaggagatcatatagagctcaaaaatcatctgatgcatatccttatgatattagtcgtctagctcaagcttgattaaatatcaaatactctatatattaattattgtggaattgacatctttaattactataagatgtaatcacaagtgtttaatatgtttttagtgctttttgctttgttttaatcataatatgttagtattttaagtccccactttttaatgaagaattctcttttatgaaaaaaaaaaaaaaaaaaaaactcgagacctcgtgccga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="+" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="110399" stop="111508"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="110699" g_stop="110726" g_length="28"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="28" r_length="28" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="110727" i_stop="110814" i_length="88">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="110815" g_stop="111202" g_length="388"/>
          <reference_exon_boundary r_type="cDNA" r_start="29" r_stop="416" r_length="388" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="421" polyA_stop="442"/>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="+" ref_id="SGN-E279303" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>416</cumulative_length_of_scored_exons>
        <coverage percentage="0.906" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E279303" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="110699" e_stop="110726"/>
          <exon e_start="110815" e_stop="111202"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACTTAATTGAAAATCCTGCTGCCTTTGGTAATATTTTTCAATATTTCTAATTCTCCCCTTACATTTTCATATGTTTTTTTTTTTTTAATTATTCGACTCTACTAATTAATTTCAGGATTTAGAGTGACAAATGCCGGATGTTGTGGGGTAGGGAGGAACAACGGACAAATTACGTGTCTTCCTTTCCAAAGGCCATGCAGAAATAGGAATGAATATCTATTTTGGGATGCATTTCATCCAACTGAAGCTGCAAATATAGTTGTCGGGAGGAGATCATATAGAGCTCAAAAATCATCTGATGCATATCCTTATGATATTAGTCGTCTAGCTCAAGCTTGATTAAATATCAAATACTCTATATATTAATTATTGTGGAATTGACATCTTTAATTACTATAAGATGTAATCACAAGTGTTTAATATGTTTTTAGTGCTTTTTGCTTTGTTTTAATCATAATATGTTAGTATTTTAAGTCCCCACTTTTTAATGAAGAATTTTTTTT</genome_strand>
        <mrna_strand>GACTTAATTGAAAATCCTGCTGCCTTTG........................................................................................GATTTAGAGTGACAAATGCCGGATGTTGTGGGGTAGGGAGGAACAACGGACAAATTACGTGTCTTCCTTTCCAAAGGCCATGCAGAAATAGGAATGAATATCTATTTTGGGATGCATTTCATCCAACTGAAGCTGCAAATATAGTTGTCGGGAGGAGATCATATAGAGCTCAAAAATCATCTGATGCATATCCTTATGATATTAGTCGTCTAGCTCAAGCTTGATTAAATATCAAATACTCTATATATTAATTATTGTGGAATTGACATCTTTAATTACTATAAGATGTAATCACAAGTGTTTAATATGTTTTTAGTGCTTTTTGCTTTGTTTTAATCATAATATGTTAGTATTTTAAGTCCCCACTTTTTAATGAAGAATTCTCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E277536" ref_strand="+" ref_description="SGN-E277536 [cLER-6-C13]">
      <seq>agaaataggaatgaatatctattttgggatgcatttcatccaactgaagctgcaaatatagttgtcgggaggagatcatatagagctcaaaaatcatctgatgcatatccttatgatattagtcgtctagctcaagcttgattaaatatcaaatactctatatattaattattgtggaattgacatctttaattactataagatgtaatcacaagtgtttaataaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="+" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="110598" stop="111421"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="110898" g_stop="111120" g_length="223"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="223" r_length="223" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="224" polyA_stop="246"/>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="+" ref_id="SGN-E277536" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>223</cumulative_length_of_scored_exons>
        <coverage percentage="0.907" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E277536" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="110898" e_stop="111120"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAATAGGAATGAATATCTATTTTGGGATGCATTTCATCCAACTGAAGCTGCAAATATAGTTGTCGGGAGGAGATCATATAGAGCTCAAAAATCATCTGATGCATATCCTTATGATATTAGTCGTCTAGCTCAAGCTTGATTAAATATCAAATACTCTATATATTAATTATTGTGGAATTGACATCTTTAATTACTATAAGATGTAATCACAAGTGTTTAAT</genome_strand>
        <mrna_strand>AGAAATAGGAATGAATATCTATTTTGGGATGCATTTCATCCAACTGAAGCTGCAAATATAGTTGTCGGGAGGAGATCATATAGAGCTCAAAAATCATCTGATGCATATCCTTATGATATTAGTCGTCTAGCTCAAGCTTGATTAAATATCAAATACTCTATATATTAATTATTGTGGAATTGACATCTTTAATTACTATAAGATGTAATCACAAGTGTTTAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E275393" ref_strand="+" ref_description="SGN-E275393 [cLEN-10-M16]">
      <seq>tgatttgctaaaatcaactcaggcaataacaaaatcattcttccatgcacaactctagaaaccactttgttaatgaagttgctaaggctgatgggtctgacattattgaaggtctagatgttatctttcttaggtatcagaaccggatttgtatgagtaacaactaacaaatctgggtggttcctgtccccccataaaagcatgcacaactatggtatcctccttaataatttcccaagccgattgacaaaaaagacccgtaaaaccatctggttcactagaactttctccacttggatcaaaaactgctgctttaacttctgcctcatcaggtgctctattctgttctcattctgttctgcattgatcaactttggaatgttttctaatagttcaaagtcctcagggaaactatcctccgtgaattgattttgaaaaaactttactgcttcattggccacctctgtctgttcttccacccatactctgtatgaattttggatcctgtacagctgcaatctctttcttcttccattcacataagcatgaaagaacttggaatttctttccccttattcaaagcactgcatgcctgctttctgtctccaaaattcctcctccaaatgcatgtatctagctaagtcagcttgggatttatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0100O21-zLi0V/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0100O21.2" temp_strand="+" temp_description="C02SLm0100O21.2  AC215489.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0100O21 sequenced_by:kribb upload_account_name:korea">
        <position start="119510" stop="120732"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="119810" g_stop="120430" g_length="621"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="594" r_length="594" r_score="0.911"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0100O21.2" gen_strand="+" ref_id="SGN-E275393" ref_strand="+">
        <total_alignment_score>0.911</total_alignment_score>
        <cumulative_length_of_scored_exons>621</cumulative_length_of_scored_exons>
        <coverage percentage="0.942" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0100O21.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E275393" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="119810" e_stop="120430"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATTTGCTGAAATCAACTCGGGCAATAACAAAATCATTCTTCCATGCACAACTCTAGGAATCACTTTGTTAATGAAGTTGCTAAGGCTGATGGGTCTGACATTATTGAAGGTCTAGATGTTATCTTTCTTAGGTATCAGAACCGGATTTGTATGAGTAACAGATCTGGATGATTCCTGTCTCCCCCTCTCCCCCCCCCCCCCCCCCCCAAAAAAAAAGCATGCACAACTATGATATCCTCGTTAATAATTTCCCAAGCCGATTGACAAAAAAGACCCATAAAACCTAAAACCATCTGGTTCACTAGAACTTTCTCCACTTGGATCAAAAACTGCTGCTTTAACTTCTGCCTCATCAGGTGATCTATTCATGTTCTCATTCTGTTCTGCATTAATCAACTTTGGAATGTTTTCTAATAGTTCAAAGTCCTCAGGGAAACTATCCTCGGTGAATTGATTTTGAAAAAACTTCACTGCTTCATTGGCCACCTCTGTCTGTTCTTCCACCCATACTGTGTCTGAATTTTGGATCCTGTACAGCTGCGATCTCTTTCTTCTTCCATTCACATAAGCATGAAAGAACTTGGAATTTCTTTCCCCTTATTCAAACCACTTCATGCCT</genome_strand>
        <mrna_strand>TGATTTGCTAAAATCAACTCAGGCAATAACAAAATCATTCTTCCATGCACAACTCTAGAAACCACTTTGTTAATGAAGTTGCTAAGGCTGATGGGTCTGACATTATTGAAGGTCTAGATGTTATCTTTCTTAGGTATCAGAACCGGATTTGTATGAGTAACA-A-CT-AACAAAT-CTGGGT---GGT-T--------CCTGTCCCCCC---ATAAAAGCATGCACAACTATGGTATCCTCCTTAATAATTTCCCAAGCCGATTGACAAAAAAGA-CC------CGTAAAACCATCTGGTTCACTAGAACTTTCTCCACTTGGATCAAAAACTGCTGCTTTAACTTCTGCCTCATCAGGTGCTCTATTC-TGTTCTCATTCTGTTCTGCATTGATCAACTTTGGAATGTTTTCTAATAGTTCAAAGTCCTCAGGGAAACTATCCTCCGTGAATTGATTTTGAAAAAACTTTACTGCTTCATTGGCCACCTCTGTCTGTTCTTCCACCCATACTCTGTATGAATTTTGGATCCTGTACAGCTGCAATCTCTTTCTTCTTCCATTCACATAAGCATGAAAGAACTTGGAATTTCTTTCCCCTTATTCAAAGCACTGCATGCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>111</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="3336" PGL_stop="552"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="3336" e_stop="3093"/>
            <exon e_start="1202" e_stop="958"/>
            <exon e_start="876" e_stop="552"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.986" acc_prob="0.589" e_score="0.926"/>
          <exon-intron don_prob="0.717" acc_prob="0.882" e_score="1.000"/>
          <exon-only e_score="0.988"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.926">
            <gDNA_exon_boundary e_start="3336" e_stop="3093" e_length="244"/>
          </exon>
          <intron i_serial="1" don_prob="0.986" acc_prob="0.589">
            <gDNA_intron_boundary i_start="3092" i_stop="1203" i_length="1890"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="1202" e_stop="958" e_length="245"/>
          </exon>
          <intron i_serial="2" don_prob="0.717" acc_prob="0.882">
            <gDNA_intron_boundary i_start="957" i_stop="877" i_length="81"/>
          </intron>
          <exon e_serial="3" e_score="0.988">
            <gDNA_exon_boundary e_start="876" e_stop="552" e_length="325"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3336" stop="3093"/>
              <exon start="1202" stop="958"/>
              <exon start="876" stop="677"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E613176" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3257" stop="3093"/>
              <exon start="1202" stop="958"/>
              <exon start="876" stop="627"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E453916" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3142" stop="3093"/>
              <exon start="1202" stop="958"/>
              <exon start="876" stop="552"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E236372" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3142" stop="3093"/>
              <exon start="1202" stop="958"/>
              <exon start="876" stop="668"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E377835" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TATGAGAGACATAGAAGTCAAGTACATGGAAGTTCCTTCTGTACAGGAACTGGCCAAGAAGAAACTCGTGTCGATTCCATCGCGATACGTACGCGATGATCAAGACCGTTCAATTGCATCATCAATTTATAAAGAAGTCCCAGTAATTGATATGCAACGATTGATCAACTTTAATGATCATGACTCCATGAATCTTGAGCTTAACAAGTTGCACTTAGCAGCTAAAGATTGGGGTTTCTTTCAG : TTGATTAATCATGGAGTTAGTTGTTCAGTAGTGGAGAAGATGAAAGACGAGACTCAAAAATTCTTCGATCTGCCATTAGAAGAGAAGAAAAAGTTTGAAAAATCTTCAGGAGATACAGATGGATTTGGACAGCTATTCGTCGTCTCTGATGAACAAAAGCTTGACTGGGCTGATCTCTTTTACTTGAAGACTTCACCCACATATTTGCGAAAGCCTGTGTTTTCCAAGCTTTACCTTTCACTTAG : AGAGACGATTGAAGAGTACGCGGATGAAATAAAGAAGCTAAGCATGAGAGTATTGGAAACGTTGGGTAAAGCTTTGGGGATTGATGAAGATGAAGTGAAGAGTGTTTTCAAAGAAGGAATGCAATCGATGAGGATGAATTACTATCCACCATGTCCACAACCAGAGAAAGTGATGGGACTTACTCCTCATTCAGATGCAACAGGCCTTACAATACTTCTTCAAGTTAATGAAACTCAAGGTCTTCAAATTAAAAAAGATGGAATTTGGATCCCCATTGAACCACTCCCTAATGCCTTCATAGTCAATGTTGGAGATGCTTTTGAG</gDNA_template>
            <first_frame> Y  E  R  H  R  S  Q  V  H  G  S  S  F  C  T  G  T  G  Q  E  E  T  R  V  D  S  I  A  I  R  T  R  *  S  R  P  F  N  C  I  I  N  L  *  R  S  P  S  N  *  Y  A  T  I  D  Q  L  *  *  S  *  L  H  E  S  *  A  *  Q  V  A  L  S  S  *  R  L  G  F  L  S   : V  D  *  S  W  S  *  L  F  S  S  G  E  D  E  R  R  D  S  K  I  L  R  S  A  I  R  R  E  E  K  V  *  K  I  F  R  R  Y  R  W  I  W  T  A  I  R  R  L  *  *  T  K  A  *  L  G  *  S  L  L  L  E  D  F  T  H  I  F  A  K  A  C  V  F  Q  A  L  P  F  T  *  :  R  D  D  *  R  V  R  G  *  N  K  E  A  K  H  E  S  I  G  N  V  G  *  S  F  G  D  *  *  R  *  S  E  E  C  F  Q  R  R  N  A  I  D  E  D  E  L  L  S  T  M  S  T  T  R  E  S  D  G  T  Y  S  S  F  R  C  N  R  P  Y  N  T  S  S  S  *  *  N  S  R  S  S  N  *  K  R  W  N  L  D  P  H  *  T  T  P  *  C  L  H  S  Q  C  W  R  C  F  *  </first_frame>
            <second_frame>  M  R  D  I  E  V  K  Y  M  E  V  P  S  V  Q  E  L  A  K  K  K  L  V  S  I  P  S  R  Y  V  R  D  D  Q  D  R  S  I  A  S  S  I  Y  K  E  V  P  V  I  D  M  Q  R  L  I  N  F  N  D  H  D  S  M  N  L  E  L  N  K  L  H  L  A  A  K  D  W  G  F  F  Q  :  L  I  N  H  G  V  S  C  S  V  V  E  K  M  K  D  E  T  Q  K  F  F  D  L  P  L  E  E  K  K  K  F  E  K  S  S  G  D  T  D  G  F  G  Q  L  F  V  V  S  D  E  Q  K  L  D  W  A  D  L  F  Y  L  K  T  S  P  T  Y  L  R  K  P  V  F  S  K  L  Y  L  S  L  R :   E  T  I  E  E  Y  A  D  E  I  K  K  L  S  M  R  V  L  E  T  L  G  K  A  L  G  I  D  E  D  E  V  K  S  V  F  K  E  G  M  Q  S  M  R  M  N  Y  Y  P  P  C  P  Q  P  E  K  V  M  G  L  T  P  H  S  D  A  T  G  L  T  I  L  L  Q  V  N  E  T  Q  G  L  Q  I  K  K  D  G  I  W  I  P  I  E  P  L  P  N  A  F  I  V  N  V  G  D  A  F  E </second_frame>
            <third_frame>   *  E  T  *  K  S  S  T  W  K  F  L  L  Y  R  N  W  P  R  R  N  S  C  R  F  H  R  D  T  Y  A  M  I  K  T  V  Q  L  H  H  Q  F  I  K  K  S  Q  *  L  I  C  N  D  *  S  T  L  M  I  M  T  P  *  I  L  S  L  T  S  C  T  *  Q  L  K  I  G  V  S  F  S :   *  L  I  M  E  L  V  V  Q  *  W  R  R  *  K  T  R  L  K  N  S  S  I  C  H  *  K  R  R  K  S  L  K  N  L  Q  E  I  Q  M  D  L  D  S  Y  S  S  S  L  M  N  K  S  L  T  G  L  I  S  F  T  *  R  L  H  P  H  I  C  E  S  L  C  F  P  S  F  T  F  H  L   : E  R  R  L  K  S  T  R  M  K  *  R  S  *  A  *  E  Y  W  K  R  W  V  K  L  W  G  L  M  K  M  K  *  R  V  F  S  K  K  E  C  N  R  *  G  *  I  T  I  H  H  V  H  N  Q  R  K  *  W  D  L  L  L  I  Q  M  Q  Q  A  L  Q  Y  F  F  K  L  M  K  L  K  V  F  K  L  K  K  M  E  F  G  S  P  L  N  H  S  L  M  P  S  *  S  M  L  E  M  L  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0100O21.2" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="3335" stop="3093"/>
                    <exon start="1202" stop="958"/>
                    <exon start="876" stop="552"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>813</number_coding_nucleotides>
                  <number_encoded_amino_acids>271</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MRDIEVKYMEVPSVQELAKKKLVSIPSRYVRDDQDRSIASSIYKEVPVIDMQRLINFNDHDSMNLELNKLHLAAKDWGFFQLINHGVSCSVVEKMKDETQKFFDLPLEEKKKFEKSSGDTDGFGQLFVVSDEQKLDWADLFYLKTSPTYLRKPVFSKLYLSLRETIEEYADEIKKLSMRVLETLGKALGIDEDEVKSVFKEGMQSMRMNYYPPCPQPEKVMGLTPHSDATGLTILLQVNETQGLQIKKDGIWIPIEPLPNAFIVNVGDAFE</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="18681" PGL_stop="17134"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="18681" e_stop="18328"/>
            <exon e_start="18232" e_stop="17985"/>
            <exon e_start="17927" e_stop="17587"/>
            <exon e_start="17524" e_stop="17134"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.992" acc_prob="0.995" e_score="0.960"/>
          <exon-intron don_prob="0.997" acc_prob="0.970" e_score="0.940"/>
          <exon-intron don_prob="0.000" acc_prob="1.000" e_score="0.951"/>
          <exon-only e_score="0.870"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.960">
            <gDNA_exon_boundary e_start="18681" e_stop="18328" e_length="354"/>
          </exon>
          <intron i_serial="1" don_prob="0.992" acc_prob="0.995">
            <gDNA_intron_boundary i_start="18327" i_stop="18233" i_length="95"/>
          </intron>
          <exon e_serial="2" e_score="0.940">
            <gDNA_exon_boundary e_start="18232" e_stop="17985" e_length="248"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.970">
            <gDNA_intron_boundary i_start="17984" i_stop="17928" i_length="57"/>
          </intron>
          <exon e_serial="3" e_score="0.951">
            <gDNA_exon_boundary e_start="17927" e_stop="17587" e_length="341"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="17586" i_stop="17525" i_length="62"/>
          </intron>
          <exon e_serial="4" e_score="0.870">
            <gDNA_exon_boundary e_start="17524" e_stop="17134" e_length="391"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18681" stop="18328"/>
              <exon start="18232" stop="17985"/>
              <exon start="17927" stop="17717"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E546098" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18681" stop="18328"/>
              <exon start="18232" stop="17985"/>
              <exon start="17927" stop="17740"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E546100" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18681" stop="18328"/>
              <exon start="18232" stop="17985"/>
              <exon start="17927" stop="17776"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E546105" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18680" stop="18328"/>
              <exon start="18232" stop="18021"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355767" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18678" stop="18328"/>
              <exon start="18232" stop="17985"/>
              <exon start="17927" stop="17630"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E690163" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18676" stop="18328"/>
              <exon start="18232" stop="17985"/>
              <exon start="17927" stop="17763"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E692332" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18670" stop="18328"/>
              <exon start="18232" stop="18138"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E359159" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17921" stop="17587"/>
              <exon start="17524" stop="17134"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E689869" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17895" stop="17587"/>
              <exon start="17524" stop="17169"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549322" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCAAAGTACAATAAAATTTTATCGACTACACACAATAATCTTTCAATCCTAGATAATGATTTTGCTAAAAAAAAAAAAATACAAGTTGATGATGGAAGAAGCGAGGTCGAGAAAGCTAGGTGGCTCTTTGAAAGTTTCTAACGTTCAGGAGCTGGCAAAACAACAACTAGCAGGTGTTCCGTCGCGATATATTCGTGTTAATGATGACGAAAATCAATTGTATAATTCGTCCATATTATTGCCTCATGAATTAGCTCCAGTTATTGACATGAAAAAACTGCTCAAAATAATTAAAGACGGTGATACAGAGCTTAACAGATTTCATCTTGCTTGCAAAGAAGGGGATTTTTCCAG : TTGGTGAATCACGGAGTGAGTTCATCATTGATGGAGAAAGTGAAATCAGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGACGAAATTCGAGCAAGAAGAGGGAGATCTCGAAGGATACGGGCAAGCATTTGTTGTATCTGAAGAGAAAAAGTTAGATTGGGCTGATATACTTTACATGATCACTCTCCCTACTCATTTGCGAAAACCTCACTTGTTTCCAAAGCTTCCTGCCTCGTTCAG : GGATGCATTGGAACAATACTCAAGAGCACTGAAGGAACTTGCTATGAAAATTCTGTACGTAATGGCCAGAGCTTTAGGGATGAAAACAGAGGATATGAATGTATTATTTGAACAAGACGGGACACAAATGATGAGAATAAATTATTATCCTCCTTGTCCTCAACCAGAGCGCGTAATGGGGTTATGCCCCCATACTGATGCTATTGGTCTAGCTATATTACTTCAGGTTAATGAAACGGAAGGTCTTCAAATTAAGAAAGATGGAGCTTGGATTCCGGTTCCATATCTTCCTGATGCCTTTGTTGTCAACATTGGAGATATTTTAGAGGTGAGATATATGT : ATTGTGACAAATGGAATTTACAAGAGCATTGATCATGGGGATAAGGAGAGGATCTCTATTGCTACATTTTTTAGCCCCAAATTGGACGGAGATTTAGGTCCAGCACCAAGTCTCCTCACTCCTCAAAATATAGGAGGATTGGAGTGGCCGATTACTTCAAAGGATTTTTTTCTCGAGAGCTCCATGGAAAATCATACCTACATACTCTAAAAATTGGAAATGGAGATCATGATAGCAATTGATCAATGTTGCATTTTATTCCGCTCGTATGATAATTATTGTAGCAATGGTGGTCTGTTTAGTTGTATGAGCTATCTCATGTGATGTAAAAGGTTGCAGAAGAACAGTTATTGCTTATATTTATATTTAAAACCATTAAGAAATGCATAAA</gDNA_template>
            <first_frame> A  K  Y  N  K  I  L  S  T  T  H  N  N  L  S  I  L  D  N  D  F  A  K  K  K  K  I  Q  V  D  D  G  R  S  E  V  E  K  A  R  W  L  F  E  S  F  *  R  S  G  A  G  K  T  T  T  S  R  C  S  V  A  I  Y  S  C  *  *  *  R  K  S  I  V  *  F  V  H  I  I  A  S  *  I  S  S  S  Y  *  H  E  K  T  A  Q  N  N  *  R  R  *  Y  R  A  *  Q  I  S  S  C  L  Q  R  R  G  F  F  Q  :  L  V  N  H  G  V  S  S  S  L  M  E  K  V  K  S  E  I  R  A  F  F  D  L  P  M  E  E  K  T  K  F  E  Q  E  E  G  D  L  E  G  Y  G  Q  A  F  V  V  S  E  E  K  K  L  D  W  A  D  I  L  Y  M  I  T  L  P  T  H  L  R  K  P  H  L  F  P  K  L  P  A  S  F  R :   D  A  L  E  Q  Y  S  R  A  L  K  E  L  A  M  K  I  L  Y  V  M  A  R  A  L  G  M  K  T  E  D  M  N  V  L  F  E  Q  D  G  T  Q  M  M  R  I  N  Y  Y  P  P  C  P  Q  P  E  R  V  M  G  L  C  P  H  T  D  A  I  G  L  A  I  L  L  Q  V  N  E  T  E  G  L  Q  I  K  K  D  G  A  W  I  P  V  P  Y  L  P  D  A  F  V  V  N  I  G  D  I  L  E  V  R  Y  M   : Y  C  D  K  W  N  L  Q  E  H  *  S  W  G  *  G  E  D  L  Y  C  Y  I  F  *  P  Q  I  G  R  R  F  R  S  S  T  K  S  P  H  S  S  K  Y  R  R  I  G  V  A  D  Y  F  K  G  F  F  S  R  E  L  H  G  K  S  Y  L  H  T  L  K  I  G  N  G  D  H  D  S  N  *  S  M  L  H  F  I  P  L  V  *  *  L  L  *  Q  W  W  S  V  *  L  Y  E  L  S  H  V  M  *  K  V  A  E  E  Q  L  L  L  I  F  I  F  K  T  I  K  K  C  I   </first_frame>
            <second_frame>  Q  S  T  I  K  F  Y  R  L  H  T  I  I  F  Q  S  *  I  M  I  L  L  K  K  K  K  Y  K  L  M  M  E  E  A  R  S  R  K  L  G  G  S  L  K  V  S  N  V  Q  E  L  A  K  Q  Q  L  A  G  V  P  S  R  Y  I  R  V  N  D  D  E  N  Q  L  Y  N  S  S  I  L  L  P  H  E  L  A  P  V  I  D  M  K  K  L  L  K  I  I  K  D  G  D  T  E  L  N  R  F  H  L  A  C  K  E  G  D  F  S  S :   W  *  I  T  E  *  V  H  H  *  W  R  K  *  N  Q  K  S  E  H  F  S  I  Y  Q  W  K  R  R  R  N  S  S  K  K  R  E  I  S  K  D  T  G  K  H  L  L  Y  L  K  R  K  S  *  I  G  L  I  Y  F  T  *  S  L  S  L  L  I  C  E  N  L  T  C  F  Q  S  F  L  P  R  S   : G  M  H  W  N  N  T  Q  E  H  *  R  N  L  L  *  K  F  C  T  *  W  P  E  L  *  G  *  K  Q  R  I  *  M  Y  Y  L  N  K  T  G  H  K  *  *  E  *  I  I  I  L  L  V  L  N  Q  S  A  *  W  G  Y  A  P  I  L  M  L  L  V  *  L  Y  Y  F  R  L  M  K  R  K  V  F  K  L  R  K  M  E  L  G  F  R  F  H  I  F  L  M  P  L  L  S  T  L  E  I  F  *  R  *  D  I  C  :  I  V  T  N  G  I  Y  K  S  I  D  H  G  D  K  E  R  I  S  I  A  T  F  F  S  P  K  L  D  G  D  L  G  P  A  P  S  L  L  T  P  Q  N  I  G  G  L  E  W  P  I  T  S  K  D  F  F  L  E  S  S  M  E  N  H  T  Y  I  L  *  K  L  E  M  E  I  M  I  A  I  D  Q  C  C  I  L  F  R  S  Y  D  N  Y  C  S  N  G  G  L  F  S  C  M  S  Y  L  M  *  C  K  R  L  Q  K  N  S  Y  C  L  Y  L  Y  L  K  P  L  R  N  A  *  </second_frame>
            <third_frame>   K  V  Q  *  N  F  I  D  Y  T  Q  *  S  F  N  P  R  *  *  F  C  *  K  K  K  N  T  S  *  *  W  K  K  R  G  R  E  S  *  V  A  L  *  K  F  L  T  F  R  S  W  Q  N  N  N  *  Q  V  F  R  R  D  I  F  V  L  M  M  T  K  I  N  C  I  I  R  P  Y  Y  C  L  M  N  *  L  Q  L  L  T  *  K  N  C  S  K  *  L  K  T  V  I  Q  S  L  T  D  F  I  L  L  A  K  K  G  I  F  P   : V  G  E  S  R  S  E  F  I  I  D  G  E  S  E  I  R  N  Q  S  I  F  R  S  T  N  G  R  E  D  E  I  R  A  R  R  G  R  S  R  R  I  R  A  S  I  C  C  I  *  R  E  K  V  R  L  G  *  Y  T  L  H  D  H  S  P  Y  S  F  A  K  T  S  L  V  S  K  A  S  C  L  V  Q  :  G  C  I  G  T  I  L  K  S  T  E  G  T  C  Y  E  N  S  V  R  N  G  Q  S  F  R  D  E  N  R  G  Y  E  C  I  I  *  T  R  R  D  T  N  D  E  N  K  L  L  S  S  L  S  S  T  R  A  R  N  G  V  M  P  P  Y  *  C  Y  W  S  S  Y  I  T  S  G  *  *  N  G  R  S  S  N  *  E  R  W  S  L  D  S  G  S  I  S  S  *  C  L  C  C  Q  H  W  R  Y  F  R  G  E  I  Y  V :   L  *  Q  M  E  F  T  R  A  L  I  M  G  I  R  R  G  S  L  L  L  H  F  L  A  P  N  W  T  E  I  *  V  Q  H  Q  V  S  S  L  L  K  I  *  E  D  W  S  G  R  L  L  Q  R  I  F  F  S  R  A  P  W  K  I  I  P  T  Y  S  K  N  W  K  W  R  S  *  *  Q  L  I  N  V  A  F  Y  S  A  R  M  I  I  I  V  A  M  V  V  C  L  V  V  *  A  I  S  C  D  V  K  G  C  R  R  T  V  I  A  Y  I  Y  I  *  N  H  *  E  M  H  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0100O21.2" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="18366" stop="18328"/>
                    <exon start="18232" stop="17985"/>
                    <exon start="17927" stop="17587"/>
                    <exon start="17524" stop="17493"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>657</number_coding_nucleotides>
                  <number_encoded_amino_acids>219</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QISSCLQRRGFFQLVNHGVSSSLMEKVKSEIRAFFDLPMEEKTKFEQEEGDLEGYGQAFVVSEEKKLDWADILYMITLPTHLRKPHLFPKLPASFRDALEQYSRALKELAMKILYVMARALGMKTEDMNVLFEQDGTQMMRINYYPPCPQPERVMGLCPHTDAIGLAILLQVNETEGLQIKKDGAWIPVPYLPDAFVVNIGDILEVRYMYCDKWNLQEH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="17134" PGL_stop="17871"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="17134" e_stop="17503"/>
            <exon e_start="17561" e_stop="17871"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.905" acc_prob="0.000" e_score="0.900"/>
          <exon-only e_score="0.913"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.900">
            <gDNA_exon_boundary e_start="17134" e_stop="17503" e_length="370"/>
          </exon>
          <intron i_serial="1" don_prob="0.905" acc_prob="0.000">
            <gDNA_intron_boundary i_start="17504" i_stop="17560" i_length="57"/>
          </intron>
          <exon e_serial="2" e_score="0.913">
            <gDNA_exon_boundary e_start="17561" e_stop="17871" e_length="311"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17134" stop="17503"/>
              <exon start="17561" stop="17871"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E546127" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTATGCATTTCTTAATGGTTTTAAATATAAATATAAGCAATAACTGTTCTTCTGCAACCTTTTACATCACATGAGATAGCTCATACAACTAAACAGACCACCATTGCTACAATAATTATCATACGAGCGGAATAAAATGCAACATTGATCAATTGCTATCATGATCTCCATTTCCAATTTTTAGAGTATGTAGGTATGATTTTCCATGGAGCTCTCGAGAAAAAAATCCTTTGAAGTAATCGGCCACTCCAATCCTCCTATATTTTGAGGAGTGAGGAGACTTGGTGCTGGACCTAAATCTCCGTCCAATTTGGGGCTAAAAAATGTAGCAATAGAGATCCTCTCCTTATCCCCATGATCAATGCTCTT : AAATTGACTTGTATCATACTAAACACACATATATCTCACCTCTAAAATATCTCCAATGTTGACAACAAAGGCATCAGGAAGATATGGAACCGGAATCCAAGCTCCATCTTTCTTAATTTGAAGACCTTCCGTTTCATTAACCTGAAGTAATATAGCTAGACCAATAGCATCAGTATGGGGGCATAACCCCATTACGCGCTCTGGTTGAGGACAAGGAGGATAATAATTTATTCTCATCATTTGTGTCCCGTCTTGTTCAAATAATACATTCATATCCTCTGTTTTCATCCCTAAAGCTCTGGCCATTACGT</gDNA_template>
            <first_frame> F  M  H  F  L  M  V  L  N  I  N  I  S  N  N  C  S  S  A  T  F  Y  I  T  *  D  S  S  Y  N  *  T  D  H  H  C  Y  N  N  Y  H  T  S  G  I  K  C  N  I  D  Q  L  L  S  *  S  P  F  P  I  F  R  V  C  R  Y  D  F  P  W  S  S  R  E  K  N  P  L  K  *  S  A  T  P  I  L  L  Y  F  E  E  *  G  D  L  V  L  D  L  N  L  R  P  I  W  G  *  K  M  *  Q  *  R  S  S  P  Y  P  H  D  Q  C  S   : *  I  D  L  Y  H  T  K  H  T  Y  I  S  P  L  K  Y  L  Q  C  *  Q  Q  R  H  Q  E  D  M  E  P  E  S  K  L  H  L  S  *  F  E  D  L  P  F  H  *  P  E  V  I  *  L  D  Q  *  H  Q  Y  G  G  I  T  P  L  R  A  L  V  E  D  K  E  D  N  N  L  F  S  S  F  V  S  R  L  V  Q  I  I  H  S  Y  P  L  F  S  S  L  K  L  W  P  L  R </first_frame>
            <second_frame>  L  C  I  S  *  W  F  *  I  *  I  *  A  I  T  V  L  L  Q  P  F  T  S  H  E  I  A  H  T  T  K  Q  T  T  I  A  T  I  I  I  I  R  A  E  *  N  A  T  L  I  N  C  Y  H  D  L  H  F  Q  F  L  E  Y  V  G  M  I  F  H  G  A  L  E  K  K  I  L  *  S  N  R  P  L  Q  S  S  Y  I  L  R  S  E  E  T  W  C  W  T  *  I  S  V  Q  F  G  A  K  K  C  S  N  R  D  P  L  L  I  P  M  I  N  A  L  :  K  L  T  C  I  I  L  N  T  H  I  S  H  L  *  N  I  S  N  V  D  N  K  G  I  R  K  I  W  N  R  N  P  S  S  I  F  L  N  L  K  T  F  R  F  I  N  L  K  *  Y  S  *  T  N  S  I  S  M  G  A  *  P  H  Y  A  L  W  L  R  T  R  R  I  I  I  Y  S  H  H  L  C  P  V  L  F  K  *  Y  I  H  I  L  C  F  H  P  *  S  S  G  H  Y   </second_frame>
            <third_frame>   Y  A  F  L  N  G  F  K  Y  K  Y  K  Q  *  L  F  F  C  N  L  L  H  H  M  R  *  L  I  Q  L  N  R  P  P  L  L  Q  *  L  S  Y  E  R  N  K  M  Q  H  *  S  I  A  I  M  I  S  I  S  N  F  *  S  M  *  V  *  F  S  M  E  L  S  R  K  K  S  F  E  V  I  G  H  S  N  P  P  I  F  *  G  V  R  R  L  G  A  G  P  K  S  P  S  N  L  G  L  K  N  V  A  I  E  I  L  S  L  S  P  *  S  M  L  L :   N  *  L  V  S  Y  *  T  H  I  Y  L  T  S  K  I  S  P  M  L  T  T  K  A  S  G  R  Y  G  T  G  I  Q  A  P  S  F  L  I  *  R  P  S  V  S  L  T  *  S  N  I  A  R  P  I  A  S  V  W  G  H  N  P  I  T  R  S  G  *  G  Q  G  G  *  *  F  I  L  I  I  C  V  P  S  C  S  N  N  T  F  I  S  S  V  F  I  P  K  A  L  A  I  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLm0100O21.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="20612" PGL_stop="21362"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="20612" e_stop="21362"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.961"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.961">
            <gDNA_exon_boundary e_start="20612" e_stop="21362" e_length="751"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20612" stop="21362"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E546564" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20622" stop="21214"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E359331" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTCCGATGAGGCTGTGTGCAGGTCCTAATTCGGATTCAAGGTTCATGTAATAGAATGTCGCAACAGAGAGCCTTTCTTCATTTGAGTTTACAATTGCTCTGTGCTCAATACTCCTATACACACCATTGCTCAATATCTGCCAAGTTAAATATATCACATTTACGCGCATAATATTTTCAGGCGGTAGTAGAACATTTTTACCTCCATCATGTCTCCAATATTCACAATCAAAGCATTTGGGAGGGGCTTTATGGGCACCCAAATATCATCTTTTCGGACTTGTAGACCTTCAGTTTCGTTCAGCTGGAAAAGGATGGTGAGGACACCAGGATCAGAATGAGTGCTTAAGCCAATTGCCCTGTTTGGTTCAGGGCAAGGCGGATAATAATTCATCCTCATTGACTGCATACCATCACTGAATAGATCTCTCATTTCCTCTTCGTCCATCCTTAAAGCCTTTGTCAATTGGCATACGATGATCCTTGCTAGGCTCTTAATTTCTTTGCAGTAAGCTTCCAAGACGTCCCTACATTTCAATACACACAAACATATTAATTAAAAGATGAGGAGAGCGGGATATAGTTATAAGGAGATAGGCACCTGAGATTCGAGGGCAATTTCTGAAACAAGTCCACTTTGCGGATACGAGGAGGAAGAGTCATTATGCCAAACATATCACTCCAATCAAGCTTCTGCTCCTCCGATACAACGAATGCATTCCCAAAACCTTCCAAGCTGTCTTCCTGTTGCC</gDNA_template>
            <first_frame> V  R  *  G  C  V  Q  V  L  I  R  I  Q  G  S  C  N  R  M  S  Q  Q  R  A  F  L  H  L  S  L  Q  L  L  C  A  Q  Y  S  Y  T  H  H  C  S  I  S  A  K  L  N  I  S  H  L  R  A  *  Y  F  Q  A  V  V  E  H  F  Y  L  H  H  V  S  N  I  H  N  Q  S  I  W  E  G  L  Y  G  H  P  N  I  I  F  S  D  L  *  T  F  S  F  V  Q  L  E  K  D  G  E  D  T  R  I  R  M  S  A  *  A  N  C  P  V  W  F  R  A  R  R  I  I  I  H  P  H  *  L  H  T  I  T  E  *  I  S  H  F  L  F  V  H  P  *  S  L  C  Q  L  A  Y  D  D  P  C  *  A  L  N  F  F  A  V  S  F  Q  D  V  P  T  F  Q  Y  T  Q  T  Y  *  L  K  D  E  E  S  G  I  *  L  *  G  D  R  H  L  R  F  E  G  N  F  *  N  K  S  T  L  R  I  R  G  G  R  V  I  M  P  N  I  S  L  Q  S  S  F  C  S  S  D  T  T  N  A  F  P  K  P  S  K  L  S  S  C  C  </first_frame>
            <second_frame>  S  D  E  A  V  C  R  S  *  F  G  F  K  V  H  V  I  E  C  R  N  R  E  P  F  F  I  *  V  Y  N  C  S  V  L  N  T  P  I  H  T  I  A  Q  Y  L  P  S  *  I  Y  H  I  Y  A  H  N  I  F  R  R  *  *  N  I  F  T  S  I  M  S  P  I  F  T  I  K  A  F  G  R  G  F  M  G  T  Q  I  S  S  F  R  T  C  R  P  S  V  S  F  S  W  K  R  M  V  R  T  P  G  S  E  *  V  L  K  P  I  A  L  F  G  S  G  Q  G  G  *  *  F  I  L  I  D  C  I  P  S  L  N  R  S  L  I  S  S  S  S  I  L  K  A  F  V  N  W  H  T  M  I  L  A  R  L  L  I  S  L  Q  *  A  S  K  T  S  L  H  F  N  T  H  K  H  I  N  *  K  M  R  R  A  G  Y  S  Y  K  E  I  G  T  *  D  S  R  A  I  S  E  T  S  P  L  C  G  Y  E  E  E  E  S  L  C  Q  T  Y  H  S  N  Q  A  S  A  P  P  I  Q  R  M  H  S  Q  N  L  P  S  C  L  P  V  A </second_frame>
            <third_frame>   P  M  R  L  C  A  G  P  N  S  D  S  R  F  M  *  *  N  V  A  T  E  S  L  S  S  F  E  F  T  I  A  L  C  S  I  L  L  Y  T  P  L  L  N  I  C  Q  V  K  Y  I  T  F  T  R  I  I  F  S  G  G  S  R  T  F  L  P  P  S  C  L  Q  Y  S  Q  S  K  H  L  G  G  A  L  W  A  P  K  Y  H  L  F  G  L  V  D  L  Q  F  R  S  A  G  K  G  W  *  G  H  Q  D  Q  N  E  C  L  S  Q  L  P  C  L  V  Q  G  K  A  D  N  N  S  S  S  L  T  A  Y  H  H  *  I  D  L  S  F  P  L  R  P  S  L  K  P  L  S  I  G  I  R  *  S  L  L  G  S  *  F  L  C  S  K  L  P  R  R  P  Y  I  S  I  H  T  N  I  L  I  K  R  *  G  E  R  D  I  V  I  R  R  *  A  P  E  I  R  G  Q  F  L  K  Q  V  H  F  A  D  T  R  R  K  S  H  Y  A  K  H  I  T  P  I  K  L  L  L  L  R  Y  N  E  C  I  P  K  T  F  Q  A  V  F  L  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0100O21.2" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="20665" stop="20931"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>264</number_coding_nucleotides>
                  <number_encoded_amino_acids>88</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NVATESLSSFEFTIALCSILLYTPLLNICQVKYITFTRIIFSGGSRTFLPPSCLQYSQSKHLGGALWAPKYHLFGLVDLQFRSAGKGW*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="28633" PGL_stop="27508"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="28633" e_stop="28239"/>
            <exon e_start="27521" e_stop="27508"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.731" e_score="0.954"/>
          <exon-only e_score="0.643"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.954">
            <gDNA_exon_boundary e_start="28633" e_stop="28239" e_length="395"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.731">
            <gDNA_intron_boundary i_start="28238" i_stop="27522" i_length="717"/>
          </intron>
          <exon e_serial="2" e_score="0.643">
            <gDNA_exon_boundary e_start="27521" e_stop="27508" e_length="14"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28633" stop="28239"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E234020" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28511" stop="28239"/>
              <exon start="27521" stop="27508"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E234270" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28449" stop="28272"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220248" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GATTCTGACAAATGGAATCTACAAAAGCACTGAACATCGAGCAATTGTGAACGAAGATAAAGAGAGGATTTCCATTGCTACATTTTTGAGCCCCAATCTGGATGGAGATTTAGGTCCAGCTCCTAGTCTCCTCACTCCTCAATGCCCTGCAGAATTTAGGAGGATTGGAGTGGCTGATTACTTCAAAGGATATTTCTCTCGAGAGCTCGTTGGAAAATCATATGTCGATTCTATAAGAATTGGAAATGGAGGCGATGGAAGCAATTGATAAATGTTTGCATTTTATGCCCCCTTGGATACCAACAGATTGTTTGATTTGGATGGACTTTTTACTGTATCATTTTGTGGATGTATAATGTTTGAATAAATTGTGGCATTTGTTGTGGTTGAATAAC : TGGAGAAAAACAAA</gDNA_template>
            <first_frame> D  S  D  K  W  N  L  Q  K  H  *  T  S  S  N  C  E  R  R  *  R  E  D  F  H  C  Y  I  F  E  P  Q  S  G  W  R  F  R  S  S  S  *  S  P  H  S  S  M  P  C  R  I  *  E  D  W  S  G  *  L  L  Q  R  I  F  L  S  R  A  R  W  K  I  I  C  R  F  Y  K  N  W  K  W  R  R  W  K  Q  L  I  N  V  C  I  L  C  P  L  G  Y  Q  Q  I  V  *  F  G  W  T  F  Y  C  I  I  L  W  M  Y  N  V  *  I  N  C  G  I  C  C  G  *  I  T :   G  E  K  Q  </first_frame>
            <second_frame>  I  L  T  N  G  I  Y  K  S  T  E  H  R  A  I  V  N  E  D  K  E  R  I  S  I  A  T  F  L  S  P  N  L  D  G  D  L  G  P  A  P  S  L  L  T  P  Q  C  P  A  E  F  R  R  I  G  V  A  D  Y  F  K  G  Y  F  S  R  E  L  V  G  K  S  Y  V  D  S  I  R  I  G  N  G  G  D  G  S  N  *  *  M  F  A  F  Y  A  P  L  D  T  N  R  L  F  D  L  D  G  L  F  T  V  S  F  C  G  C  I  M  F  E  *  I  V  A  F  V  V  V  E  *   : L  E  K  N  K </second_frame>
            <third_frame>   F  *  Q  M  E  S  T  K  A  L  N  I  E  Q  L  *  T  K  I  K  R  G  F  P  L  L  H  F  *  A  P  I  W  M  E  I  *  V  Q  L  L  V  S  S  L  L  N  A  L  Q  N  L  G  G  L  E  W  L  I  T  S  K  D  I  S  L  E  S  S  L  E  N  H  M  S  I  L  *  E  L  E  M  E  A  M  E  A  I  D  K  C  L  H  F  M  P  P  W  I  P  T  D  C  L  I  W  M  D  F  L  L  Y  H  F  V  D  V  *  C  L  N  K  L  W  H  L  L  W  L  N  N  :  W  R  K  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0100O21.2" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="28632" stop="28366"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>264</number_coding_nucleotides>
                  <number_encoded_amino_acids>88</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ILTNGIYKSTEHRAIVNEDKERISIATFLSPNLDGDLGPAPSLLTPQCPAEFRRIGVADYFKGYFSRELVGKSYVDSIRIGNGGDGSN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="30027" PGL_stop="28781"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="30027" e_stop="29689"/>
            <exon e_start="29395" e_stop="29148"/>
            <exon e_start="29076" e_stop="28781"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.969" e_score="0.979"/>
          <exon-intron don_prob="0.999" acc_prob="0.784" e_score="0.996"/>
          <exon-only e_score="0.980"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.979">
            <gDNA_exon_boundary e_start="30027" e_stop="29689" e_length="339"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.969">
            <gDNA_intron_boundary i_start="29688" i_stop="29396" i_length="293"/>
          </intron>
          <exon e_serial="2" e_score="0.996">
            <gDNA_exon_boundary e_start="29395" e_stop="29148" e_length="248"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.784">
            <gDNA_intron_boundary i_start="29147" i_stop="29077" i_length="71"/>
          </intron>
          <exon e_serial="3" e_score="0.980">
            <gDNA_exon_boundary e_start="29076" e_stop="28781" e_length="296"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30027" stop="29689"/>
              <exon start="29395" stop="29148"/>
              <exon start="29076" stop="29057"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331660" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30027" stop="29689"/>
              <exon start="29395" stop="29205"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331653" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30020" stop="29689"/>
              <exon start="29395" stop="29148"/>
              <exon start="29076" stop="29035"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E329895" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30020" stop="29689"/>
              <exon start="29395" stop="29314"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E330172" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30014" stop="29689"/>
              <exon start="29395" stop="29148"/>
              <exon start="29076" stop="28944"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E334512" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30011" stop="29689"/>
              <exon start="29395" stop="29148"/>
              <exon start="29076" stop="29056"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E330283" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29970" stop="29689"/>
              <exon start="29395" stop="29313"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331661" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29930" stop="29689"/>
              <exon start="29395" stop="29148"/>
              <exon start="29076" stop="29013"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E329296" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29755" stop="29689"/>
              <exon start="29395" stop="29148"/>
              <exon start="29076" stop="28856"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331048" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29355" stop="29148"/>
              <exon start="29076" stop="28781"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E333231" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTATATGATACACGTTATTATTTCATATCTCAATAAGTTTACTTTGTAAAACAAGTTTGAGGGAGAAAAAAAATACAAACTTCATCAATGGAAGAAGCAAAGTTGAGAAAGCTAGGTGGTTCTCTGAAAGTCCCTAACGTTCAAGAACTTGCAAAGCAACAACTAGCAGCCGTTCCATCGCGATATATGCGCGATGATATTGAAAATCAATCATATTCTTCCATATTACCTCAAGTTCCAGTTATTGATATGAAAAAATTGCTGGAAATTGGAGATATTGATGATGATTCGGAACTCGTGAGGCTTCATCTCGCTTGCAAAGAATGGGGATTTTTTCAG : CTGGTGAATCATGGAGTGAATTCCTCATTGATGAAGAAAGTGAAATCGGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGACGAAATTCGAGCAAGAAGAAGGAGATCTCGAAGGATACGGGCAAGCATTTGTTGTATCTGAAGAACAAAAGTTAGATTGGGCTGATATACTTTACATGATCACTCTCCCTACTCATTTGCGAAAACCTCACTTGTTTCCAAAGCTTCCTGCCTCGTTCAG : GGATGCATTGGAACAATACTCAAGAACACTGAAGGAACTTGCTATGAAAATTCTGTACGTAATGGCCAGAGCTTTAGGGATGAAAACAGAGGATATGAATGTACTATTTGAACAAGACGGGACACAAATGATGAGAATAAATTATTATCCTCCTTGTCCTCAACCAGAGCGCGTAATGGGGTTATGCCCCCATACTGATGCTATTGGTCTAGCTATATTACTTCAGGTTAATGAAACGGAAGGTCTTCAAATTAAGAAAGATGGAGCTTGGACTCCGGTTCCATATCTTCCTGATG</gDNA_template>
            <first_frame> L  Y  D  T  R  Y  Y  F  I  S  Q  *  V  Y  F  V  K  Q  V  *  G  R  K  K  I  Q  T  S  S  M  E  E  A  K  L  R  K  L  G  G  S  L  K  V  P  N  V  Q  E  L  A  K  Q  Q  L  A  A  V  P  S  R  Y  M  R  D  D  I  E  N  Q  S  Y  S  S  I  L  P  Q  V  P  V  I  D  M  K  K  L  L  E  I  G  D  I  D  D  D  S  E  L  V  R  L  H  L  A  C  K  E  W  G  F  F  Q  :  L  V  N  H  G  V  N  S  S  L  M  K  K  V  K  S  E  I  R  A  F  F  D  L  P  M  E  E  K  T  K  F  E  Q  E  E  G  D  L  E  G  Y  G  Q  A  F  V  V  S  E  E  Q  K  L  D  W  A  D  I  L  Y  M  I  T  L  P  T  H  L  R  K  P  H  L  F  P  K  L  P  A  S  F  R :   D  A  L  E  Q  Y  S  R  T  L  K  E  L  A  M  K  I  L  Y  V  M  A  R  A  L  G  M  K  T  E  D  M  N  V  L  F  E  Q  D  G  T  Q  M  M  R  I  N  Y  Y  P  P  C  P  Q  P  E  R  V  M  G  L  C  P  H  T  D  A  I  G  L  A  I  L  L  Q  V  N  E  T  E  G  L  Q  I  K  K  D  G  A  W  T  P  V  P  Y  L  P  D  </first_frame>
            <second_frame>  Y  M  I  H  V  I  I  S  Y  L  N  K  F  T  L  *  N  K  F  E  G  E  K  K  Y  K  L  H  Q  W  K  K  Q  S  *  E  S  *  V  V  L  *  K  S  L  T  F  K  N  L  Q  S  N  N  *  Q  P  F  H  R  D  I  C  A  M  I  L  K  I  N  H  I  L  P  Y  Y  L  K  F  Q  L  L  I  *  K  N  C  W  K  L  E  I  L  M  M  I  R  N  S  *  G  F  I  S  L  A  K  N  G  D  F  F  S :   W  *  I  M  E  *  I  P  H  *  *  R  K  *  N  R  K  S  E  H  F  S  I  Y  Q  W  K  R  R  R  N  S  S  K  K  K  E  I  S  K  D  T  G  K  H  L  L  Y  L  K  N  K  S  *  I  G  L  I  Y  F  T  *  S  L  S  L  L  I  C  E  N  L  T  C  F  Q  S  F  L  P  R  S   : G  M  H  W  N  N  T  Q  E  H  *  R  N  L  L  *  K  F  C  T  *  W  P  E  L  *  G  *  K  Q  R  I  *  M  Y  Y  L  N  K  T  G  H  K  *  *  E  *  I  I  I  L  L  V  L  N  Q  S  A  *  W  G  Y  A  P  I  L  M  L  L  V  *  L  Y  Y  F  R  L  M  K  R  K  V  F  K  L  R  K  M  E  L  G  L  R  F  H  I  F  L  M </second_frame>
            <third_frame>   I  *  Y  T  L  L  F  H  I  S  I  S  L  L  C  K  T  S  L  R  E  K  K  N  T  N  F  I  N  G  R  S  K  V  E  K  A  R  W  F  S  E  S  P  *  R  S  R  T  C  K  A  T  T  S  S  R  S  I  A  I  Y  A  R  *  Y  *  K  S  I  I  F  F  H  I  T  S  S  S  S  Y  *  Y  E  K  I  A  G  N  W  R  Y  *  *  *  F  G  T  R  E  A  S  S  R  L  Q  R  M  G  I  F  S   : A  G  E  S  W  S  E  F  L  I  D  E  E  S  E  I  G  N  Q  S  I  F  R  S  T  N  G  R  E  D  E  I  R  A  R  R  R  R  S  R  R  I  R  A  S  I  C  C  I  *  R  T  K  V  R  L  G  *  Y  T  L  H  D  H  S  P  Y  S  F  A  K  T  S  L  V  S  K  A  S  C  L  V  Q  :  G  C  I  G  T  I  L  K  N  T  E  G  T  C  Y  E  N  S  V  R  N  G  Q  S  F  R  D  E  N  R  G  Y  E  C  T  I  *  T  R  R  D  T  N  D  E  N  K  L  L  S  S  L  S  S  T  R  A  R  N  G  V  M  P  P  Y  *  C  Y  W  S  S  Y  I  T  S  G  *  *  N  G  R  S  S  N  *  E  R  W  S  L  D  S  G  S  I  S  S  *   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0100O21.2" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="29967" stop="29689"/>
                    <exon start="29395" stop="29148"/>
                    <exon start="29076" stop="28782"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>822</number_coding_nucleotides>
                  <number_encoded_amino_acids>274</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GRKKIQTSSMEEAKLRKLGGSLKVPNVQELAKQQLAAVPSRYMRDDIENQSYSSILPQVPVIDMKKLLEIGDIDDDSELVRLHLACKEWGFFQLVNHGVNSSLMKKVKSEIRAFFDLPMEEKTKFEQEEGDLEGYGQAFVVSEEQKLDWADILYMITLPTHLRKPHLFPKLPASFRDALEQYSRTLKELAMKILYVMARALGMKTEDMNVLFEQDGTQMMRINYYPPCPQPERVMGLCPHTDAIGLAILLQVNETEGLQIKKDGAWTPVPYLPD</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="30027" e_stop="29689"/>
            <exon e_start="29395" e_stop="28929"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.969" e_score="0.979"/>
          <exon-only e_score="0.933"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.979">
            <gDNA_exon_boundary e_start="30027" e_stop="29689" e_length="339"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.969">
            <gDNA_intron_boundary i_start="29688" i_stop="29396" i_length="293"/>
          </intron>
          <exon e_serial="2" e_score="0.933">
            <gDNA_exon_boundary e_start="29395" e_stop="28929" e_length="467"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30027" stop="29689"/>
              <exon start="29395" stop="29205"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331653" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30020" stop="29689"/>
              <exon start="29395" stop="29314"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E330172" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29970" stop="29689"/>
              <exon start="29395" stop="29313"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331661" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29395" stop="28929"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355747" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29395" stop="28930"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355750" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTATATGATACACGTTATTATTTCATATCTCAATAAGTTTACTTTGTAAAACAAGTTTGAGGGAGAAAAAAAATACAAACTTCATCAATGGAAGAAGCAAAGTTGAGAAAGCTAGGTGGTTCTCTGAAAGTCCCTAACGTTCAAGAACTTGCAAAGCAACAACTAGCAGCCGTTCCATCGCGATATATGCGCGATGATATTGAAAATCAATCATATTCTTCCATATTACCTCAAGTTCCAGTTATTGATATGAAAAAATTGCTGGAAATTGGAGATATTGATGATGATTCGGAACTCGTGAGGCTTCATCTCGCTTGCAAAGAATGGGGATTTTTTCAG : CTGGTGAATCATGGAGTGAATTCCTCATTGATGAAGAAAGTGAAATCGGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGACGAAATTCGAGCAAGAAGAAGGAGATCTCGAAGGATACGGGCAAGCATTTGTTGTATCTGAAGAACAAAAGTTAGATTGGGCTGATATACTTTACATGATCACTCTCCCTACTCATTTGCGAAAACCTCACTTGTTTCCAAAGCTTCCTGCCTCGTTCAGGTACGATAATATATAACTGAGTTTACGATTAAATATTTAGTTCACAATATTTAAATTCTTGGACCGATAAGGGATGCATTGGAACAATACTCAAGAACACTGAAGGAACTTGCTATGAAAATTCTGTACGTAATGGCCAGAGCTTTAGGGATGAAAACAGAGGATATGAATGTACTATTTGAACAAGACGGGACACAAATGATGAGAATAAATTATTAT</gDNA_template>
            <first_frame> L  Y  D  T  R  Y  Y  F  I  S  Q  *  V  Y  F  V  K  Q  V  *  G  R  K  K  I  Q  T  S  S  M  E  E  A  K  L  R  K  L  G  G  S  L  K  V  P  N  V  Q  E  L  A  K  Q  Q  L  A  A  V  P  S  R  Y  M  R  D  D  I  E  N  Q  S  Y  S  S  I  L  P  Q  V  P  V  I  D  M  K  K  L  L  E  I  G  D  I  D  D  D  S  E  L  V  R  L  H  L  A  C  K  E  W  G  F  F  Q  :  L  V  N  H  G  V  N  S  S  L  M  K  K  V  K  S  E  I  R  A  F  F  D  L  P  M  E  E  K  T  K  F  E  Q  E  E  G  D  L  E  G  Y  G  Q  A  F  V  V  S  E  E  Q  K  L  D  W  A  D  I  L  Y  M  I  T  L  P  T  H  L  R  K  P  H  L  F  P  K  L  P  A  S  F  R  Y  D  N  I  *  L  S  L  R  L  N  I  *  F  T  I  F  K  F  L  D  R  *  G  M  H  W  N  N  T  Q  E  H  *  R  N  L  L  *  K  F  C  T  *  W  P  E  L  *  G  *  K  Q  R  I  *  M  Y  Y  L  N  K  T  G  H  K  *  *  E  *  I  I   </first_frame>
            <second_frame>  Y  M  I  H  V  I  I  S  Y  L  N  K  F  T  L  *  N  K  F  E  G  E  K  K  Y  K  L  H  Q  W  K  K  Q  S  *  E  S  *  V  V  L  *  K  S  L  T  F  K  N  L  Q  S  N  N  *  Q  P  F  H  R  D  I  C  A  M  I  L  K  I  N  H  I  L  P  Y  Y  L  K  F  Q  L  L  I  *  K  N  C  W  K  L  E  I  L  M  M  I  R  N  S  *  G  F  I  S  L  A  K  N  G  D  F  F  S :   W  *  I  M  E  *  I  P  H  *  *  R  K  *  N  R  K  S  E  H  F  S  I  Y  Q  W  K  R  R  R  N  S  S  K  K  K  E  I  S  K  D  T  G  K  H  L  L  Y  L  K  N  K  S  *  I  G  L  I  Y  F  T  *  S  L  S  L  L  I  C  E  N  L  T  C  F  Q  S  F  L  P  R  S  G  T  I  I  Y  N  *  V  Y  D  *  I  F  S  S  Q  Y  L  N  S  W  T  D  K  G  C  I  G  T  I  L  K  N  T  E  G  T  C  Y  E  N  S  V  R  N  G  Q  S  F  R  D  E  N  R  G  Y  E  C  T  I  *  T  R  R  D  T  N  D  E  N  K  L  L  </second_frame>
            <third_frame>   I  *  Y  T  L  L  F  H  I  S  I  S  L  L  C  K  T  S  L  R  E  K  K  N  T  N  F  I  N  G  R  S  K  V  E  K  A  R  W  F  S  E  S  P  *  R  S  R  T  C  K  A  T  T  S  S  R  S  I  A  I  Y  A  R  *  Y  *  K  S  I  I  F  F  H  I  T  S  S  S  S  Y  *  Y  E  K  I  A  G  N  W  R  Y  *  *  *  F  G  T  R  E  A  S  S  R  L  Q  R  M  G  I  F  S   : A  G  E  S  W  S  E  F  L  I  D  E  E  S  E  I  G  N  Q  S  I  F  R  S  T  N  G  R  E  D  E  I  R  A  R  R  R  R  S  R  R  I  R  A  S  I  C  C  I  *  R  T  K  V  R  L  G  *  Y  T  L  H  D  H  S  P  Y  S  F  A  K  T  S  L  V  S  K  A  S  C  L  V  Q  V  R  *  Y  I  T  E  F  T  I  K  Y  L  V  H  N  I  *  I  L  G  P  I  R  D  A  L  E  Q  Y  S  R  T  L  K  E  L  A  M  K  I  L  Y  V  M  A  R  A  L  G  M  K  T  E  D  M  N  V  L  F  E  Q  D  G  T  Q  M  M  R  I  N  Y  Y </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0100O21.2" strand="-"/>
                <serials PGL_serial="6" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="29967" stop="29689"/>
                    <exon start="29395" stop="29132"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>540</number_coding_nucleotides>
                  <number_encoded_amino_acids>180</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GRKKIQTSSMEEAKLRKLGGSLKVPNVQELAKQQLAAVPSRYMRDDIENQSYSSILPQVPVIDMKKLLEIGDIDDDSELVRLHLACKEWGFFQLVNHGVNSSLMKKVKSEIRAFFDLPMEEKTKFEQEEGDLEGYGQAFVVSEEQKLDWADILYMITLPTHLRKPHLFPKLPASFRYDNI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="-" PGL_start="33017" PGL_stop="30996"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="33017" e_stop="32723"/>
            <exon e_start="32601" e_stop="32289"/>
            <exon e_start="31034" e_stop="30996"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="0.905"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.907"/>
          <exon-only e_score="0.667"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.905">
            <gDNA_exon_boundary e_start="33017" e_stop="32723" e_length="295"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="32722" i_stop="32602" i_length="121"/>
          </intron>
          <exon e_serial="2" e_score="0.907">
            <gDNA_exon_boundary e_start="32601" e_stop="32289" e_length="313"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="32288" i_stop="31035" i_length="1254"/>
          </intron>
          <exon e_serial="3" e_score="0.667">
            <gDNA_exon_boundary e_start="31034" e_stop="30996" e_length="39"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33017" stop="32723"/>
              <exon start="32601" stop="32289"/>
              <exon start="31034" stop="30996"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E434308" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAAGAGCCTAGCAATGATCATCGTATGTCACTTGGCAAAGGCTTTAAGGATAGATGAAAATGAAATGAGAGAGCTATTCAGTGATGGTGTGCAGTCAATGAGGATGAATTATTATCCGCCTTGCCCTGAGCCAGACAGGGCAATTGGCTTAAGCCCTCATTCTGATGCTGATGCCCTCACCATCCTTTTCCAGCTCGATGAAACTGAAGGTCTCCAAGTTCGAAAAGACGACATTTGGGTGCCTATAAAGCCCCTCCCAAATGCTTTGATTGTTAATATTGGCGATATGATGGAG : ATATTGAGCAATGGTGTTTATAAGAGCATTGAGCACAGAGCAATTGTAAACTCAAACAAAGAGAGACTCTCTGTTGCAACATTCTCTACCTTCAACCTTGATTCCGAATTAGGACCTGCACATAGCCTCATTGGAACAAATAATCCTCCAATTTTCCGAAGAGTTGTCGTGCAAAAATATTTACAGGACTTTTTTGCACGAAAACTTGACGGAAAATCATACCTTGATGTCATGAAGGTAGAGGTGAGGAATGGAGAATCCTAGGTAGTATTTGATAATATAATTTACTCTTGGCGTTGAAATCTGGACTTCC : CGTGTTTATTTACCCAAAAAAATGACATAAATAATCTCT</gDNA_template>
            <first_frame> Q  E  P  S  N  D  H  R  M  S  L  G  K  G  F  K  D  R  *  K  *  N  E  R  A  I  Q  *  W  C  A  V  N  E  D  E  L  L  S  A  L  P  *  A  R  Q  G  N  W  L  K  P  S  F  *  C  *  C  P  H  H  P  F  P  A  R  *  N  *  R  S  P  S  S  K  R  R  H  L  G  A  Y  K  A  P  P  K  C  F  D  C  *  Y  W  R  Y  D  G   : D  I  E  Q  W  C  L  *  E  H  *  A  Q  S  N  C  K  L  K  Q  R  E  T  L  C  C  N  I  L  Y  L  Q  P  *  F  R  I  R  T  C  T  *  P  H  W  N  K  *  S  S  N  F  P  K  S  C  R  A  K  I  F  T  G  L  F  C  T  K  T  *  R  K  I  I  P  *  C  H  E  G  R  G  E  E  W  R  I  L  G  S  I  *  *  Y  N  L  L  L  A  L  K  S  G  L  P :   V  F  I  Y  P  K  K  *  H  K  *  S   </first_frame>
            <second_frame>  K  S  L  A  M  I  I  V  C  H  L  A  K  A  L  R  I  D  E  N  E  M  R  E  L  F  S  D  G  V  Q  S  M  R  M  N  Y  Y  P  P  C  P  E  P  D  R  A  I  G  L  S  P  H  S  D  A  D  A  L  T  I  L  F  Q  L  D  E  T  E  G  L  Q  V  R  K  D  D  I  W  V  P  I  K  P  L  P  N  A  L  I  V  N  I  G  D  M  M  E  :  I  L  S  N  G  V  Y  K  S  I  E  H  R  A  I  V  N  S  N  K  E  R  L  S  V  A  T  F  S  T  F  N  L  D  S  E  L  G  P  A  H  S  L  I  G  T  N  N  P  P  I  F  R  R  V  V  V  Q  K  Y  L  Q  D  F  F  A  R  K  L  D  G  K  S  Y  L  D  V  M  K  V  E  V  R  N  G  E  S  *  V  V  F  D  N  I  I  Y  S  W  R  *  N  L  D  F   : P  C  L  F  T  Q  K  N  D  I  N  N  L  </second_frame>
            <third_frame>   R  A  *  Q  *  S  S  Y  V  T  W  Q  R  L  *  G  *  M  K  M  K  *  E  S  Y  S  V  M  V  C  S  Q  *  G  *  I  I  I  R  L  A  L  S  Q  T  G  Q  L  A  *  A  L  I  L  M  L  M  P  S  P  S  F  S  S  S  M  K  L  K  V  S  K  F  E  K  T  T  F  G  C  L  *  S  P  S  Q  M  L  *  L  L  I  L  A  I  *  W  R :   Y  *  A  M  V  F  I  R  A  L  S  T  E  Q  L  *  T  Q  T  K  R  D  S  L  L  Q  H  S  L  P  S  T  L  I  P  N  *  D  L  H  I  A  S  L  E  Q  I  I  L  Q  F  S  E  E  L  S  C  K  N  I  Y  R  T  F  L  H  E  N  L  T  E  N  H  T  L  M  S  *  R  *  R  *  G  M  E  N  P  R  *  Y  L  I  I  *  F  T  L  G  V  E  I  W  T  S  :  R  V  Y  L  P  K  K  M  T  *  I  I  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0100O21.2" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="33016" stop="32723"/>
                    <exon start="32601" stop="32338"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>555</number_coding_nucleotides>
                  <number_encoded_amino_acids>185</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KSLAMIIVCHLAKALRIDENEMRELFSDGVQSMRMNYYPPCPEPDRAIGLSPHSDADALTILFQLDETEGLQVRKDDIWVPIKPLPNALIVNIGDMMEILSNGVYKSIEHRAIVNSNKERLSVATFSTFNLDSELGPAHSLIGTNNPPIFRRVVVQKYLQDFFARKLDGKSYLDVMKVEVRNGES*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="33876" PGL_stop="33313"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="33876" e_stop="33524"/>
            <exon e_start="33430" e_stop="33313"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.994" acc_prob="0.966" e_score="0.955"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.955">
            <gDNA_exon_boundary e_start="33876" e_stop="33524" e_length="353"/>
          </exon>
          <intron i_serial="1" don_prob="0.994" acc_prob="0.966">
            <gDNA_intron_boundary i_start="33523" i_stop="33431" i_length="93"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="33430" e_stop="33313" e_length="118"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33876" stop="33524"/>
              <exon start="33430" stop="33313"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E247762" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGAAATAGATAAACCCAAAGGTGAATGGGATCTATAGTTTGAAGGAGTCATTGTATCTATATCTCTGCTATTCTTTTCCATCAGACGTTAATAATTTTCAATTTAATTACTAACAAAGAGTGACGACGGTGGCAAAAATGAACTTTGGAAAATCTCTGTTAGTTCCTAGTGTTCAAGAGCTTGCCAAACAGCATCTAACCAATATTCCGGCCAGGTATGTCCGCCCAGAAGAAGAATCTCCGGTCATATATGCCGGAGCATCGGTCCCAGTTATCGATCTTCAAAAGTTGATTTCCATGGATTCTGAGCTGCAAAAGCTTCACTCGGCTTGCCAACAATGGGGTTTCCTCCAG : GTTATAAACCATGGAGTGACATCTTCGTTGTTGGAGGATTTCAAGAGAGAGGTTATTGATTTGTTCAAACTTCCAATGGAAGAAAAGAAGAAACTATGGCAACAGGAAGACAGCTTTG</gDNA_template>
            <first_frame> R  N  R  *  T  Q  R  *  M  G  S  I  V  *  R  S  H  C  I  Y  I  S  A  I  L  F  H  Q  T  L  I  I  F  N  L  I  T  N  K  E  *  R  R  W  Q  K  *  T  L  E  N  L  C  *  F  L  V  F  K  S  L  P  N  S  I  *  P  I  F  R  P  G  M  S  A  Q  K  K  N  L  R  S  Y  M  P  E  H  R  S  Q  L  S  I  F  K  S  *  F  P  W  I  L  S  C  K  S  F  T  R  L  A  N  N  G  V  S  S  R :   L  *  T  M  E  *  H  L  R  C  W  R  I  S  R  E  R  L  L  I  C  S  N  F  Q  W  K  K  R  R  N  Y  G  N  R  K  T  A  L </first_frame>
            <second_frame>  E  I  D  K  P  K  G  E  W  D  L  *  F  E  G  V  I  V  S  I  S  L  L  F  F  S  I  R  R  *  *  F  S  I  *  L  L  T  K  S  D  D  G  G  K  N  E  L  W  K  I  S  V  S  S  *  C  S  R  A  C  Q  T  A  S  N  Q  Y  S  G  Q  V  C  P  P  R  R  R  I  S  G  H  I  C  R  S  I  G  P  S  Y  R  S  S  K  V  D  F  H  G  F  *  A  A  K  A  S  L  G  L  P  T  M  G  F  P  P   : G  Y  K  P  W  S  D  I  F  V  V  G  G  F  Q  E  R  G  Y  *  F  V  Q  T  S  N  G  R  K  E  E  T  M  A  T  G  R  Q  L   </second_frame>
            <third_frame>   K  *  I  N  P  K  V  N  G  I  Y  S  L  K  E  S  L  Y  L  Y  L  C  Y  S  F  P  S  D  V  N  N  F  Q  F  N  Y  *  Q  R  V  T  T  V  A  K  M  N  F  G  K  S  L  L  V  P  S  V  Q  E  L  A  K  Q  H  L  T  N  I  P  A  R  Y  V  R  P  E  E  E  S  P  V  I  Y  A  G  A  S  V  P  V  I  D  L  Q  K  L  I  S  M  D  S  E  L  Q  K  L  H  S  A  C  Q  Q  W  G  F  L  Q  :  V  I  N  H  G  V  T  S  S  L  L  E  D  F  K  R  E  V  I  D  L  F  K  L  P  M  E  E  K  K  K  L  W  Q  Q  E  D  S  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0100O21.2" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="33763" stop="33524"/>
                    <exon start="33430" stop="33314"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>357</number_coding_nucleotides>
                  <number_encoded_amino_acids>119</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QRVTTVAKMNFGKSLLVPSVQELAKQHLTNIPARYVRPEEESPVIYAGASVPVIDLQKLISMDSELQKLHSACQQWGFLQVINHGVTSSLLEDFKREVIDLFKLPMEEKKKLWQQEDSF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="39180" PGL_stop="37604"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="39180" e_stop="38878"/>
            <exon e_start="38264" e_stop="38017"/>
            <exon e_start="37808" e_stop="37604"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.965" acc_prob="0.990" e_score="0.997"/>
          <exon-intron don_prob="0.991" acc_prob="1.000" e_score="0.996"/>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="39180" e_stop="38878" e_length="303"/>
          </exon>
          <intron i_serial="1" don_prob="0.965" acc_prob="0.990">
            <gDNA_intron_boundary i_start="38877" i_stop="38265" i_length="613"/>
          </intron>
          <exon e_serial="2" e_score="0.996">
            <gDNA_exon_boundary e_start="38264" e_stop="38017" e_length="248"/>
          </exon>
          <intron i_serial="2" don_prob="0.991" acc_prob="1.000">
            <gDNA_intron_boundary i_start="38016" i_stop="37809" i_length="208"/>
          </intron>
          <exon e_serial="3" e_score="0.995">
            <gDNA_exon_boundary e_start="37808" e_stop="37604" e_length="205"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="39180" stop="38878"/>
              <exon start="38264" stop="38017"/>
              <exon start="37808" stop="37789"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319740" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="39112" stop="38878"/>
              <exon start="38264" stop="38017"/>
              <exon start="37808" stop="37604"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E395848" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="39111" stop="38878"/>
              <exon start="38264" stop="38017"/>
              <exon start="37808" stop="37783"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E207227" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="39111" stop="38878"/>
              <exon start="38264" stop="38072"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E208253" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGATTAAAAACCCAAACCCGAATTTGATAGAAATTTTCAAGTTTGTAACAAGAGCCAATGGATTCAACCCCGGAAAAATTGAACTTTGGAAAATCTCTGTTAGTTCCAAGTGTTCAAGAGCTTGCCAAACAGCACCTAACCATTATCCCAGACAGGTATCTCCGGCCAGAGCAAGAAACTCCGGTCATTTCCGCCGGAGCGGAGGTTCCAGTTATCGATGTTCAAAAGTTGATTTCAGGTGATTCCATGGATTCTGAGCTGCAAAAGCTTCACTCTGCTTGCCAACAATGGGGTTTCCTACAG : GTTATAAACCATGGGGTGACACCTTTGCTCTTGGAGGACTTCAAGAGAGAGGTTATTGAATTGTTCAAACTTCCAATGGAAGAAAAGAAGAAGCTATGGAAACAGGAAGACAGCTTGGAAGGTTTCGGGCATGCATTCGTTGTGTCTGAAGATCAGAAACTTGATTGGAGTGACAGGTTTGGCATACTGACTCTTCCTCCTCATATCCGCAAAGTGGATTTGTTTCAGAAGTTGCCCTCGAAGCTCAG : GGATATCATGGAAGCATACTGCAAAGAAATTAAGAGCCTAGCAACGAGCATTATATGTCAATTGGCAAAGGCTTTAAGGATGGACGAAGAGGAAATGAGAGATCTATTCAATGATGGTATGCAGACGCTGAGGATGAATTATTATCCGCCTTGCCCTGAGCCAGACAAGGCAATTGGCATAAGCCCTCATTCTGATGCCGATGCC</gDNA_template>
            <first_frame> *  L  K  T  Q  T  R  I  *  *  K  F  S  S  L  *  Q  E  P  M  D  S  T  P  E  K  L  N  F  G  K  S  L  L  V  P  S  V  Q  E  L  A  K  Q  H  L  T  I  I  P  D  R  Y  L  R  P  E  Q  E  T  P  V  I  S  A  G  A  E  V  P  V  I  D  V  Q  K  L  I  S  G  D  S  M  D  S  E  L  Q  K  L  H  S  A  C  Q  Q  W  G  F  L  Q  :  V  I  N  H  G  V  T  P  L  L  L  E  D  F  K  R  E  V  I  E  L  F  K  L  P  M  E  E  K  K  K  L  W  K  Q  E  D  S  L  E  G  F  G  H  A  F  V  V  S  E  D  Q  K  L  D  W  S  D  R  F  G  I  L  T  L  P  P  H  I  R  K  V  D  L  F  Q  K  L  P  S  K  L  R :   D  I  M  E  A  Y  C  K  E  I  K  S  L  A  T  S  I  I  C  Q  L  A  K  A  L  R  M  D  E  E  E  M  R  D  L  F  N  D  G  M  Q  T  L  R  M  N  Y  Y  P  P  C  P  E  P  D  K  A  I  G  I  S  P  H  S  D  A  D  A </first_frame>
            <second_frame>  D  *  K  P  K  P  E  F  D  R  N  F  Q  V  C  N  K  S  Q  W  I  Q  P  R  K  N  *  T  L  E  N  L  C  *  F  Q  V  F  K  S  L  P  N  S  T  *  P  L  S  Q  T  G  I  S  G  Q  S  K  K  L  R  S  F  P  P  E  R  R  F  Q  L  S  M  F  K  S  *  F  Q  V  I  P  W  I  L  S  C  K  S  F  T  L  L  A  N  N  G  V  S  Y  R :   L  *  T  M  G  *  H  L  C  S  W  R  T  S  R  E  R  L  L  N  C  S  N  F  Q  W  K  K  R  R  S  Y  G  N  R  K  T  A  W  K  V  S  G  M  H  S  L  C  L  K  I  R  N  L  I  G  V  T  G  L  A  Y  *  L  F  L  L  I  S  A  K  W  I  C  F  R  S  C  P  R  S  S   : G  I  S  W  K  H  T  A  K  K  L  R  A  *  Q  R  A  L  Y  V  N  W  Q  R  L  *  G  W  T  K  R  K  *  E  I  Y  S  M  M  V  C  R  R  *  G  *  I  I  I  R  L  A  L  S  Q  T  R  Q  L  A  *  A  L  I  L  M  P  M   </second_frame>
            <third_frame>   I  K  N  P  N  P  N  L  I  E  I  F  K  F  V  T  R  A  N  G  F  N  P  G  K  I  E  L  W  K  I  S  V  S  S  K  C  S  R  A  C  Q  T  A  P  N  H  Y  P  R  Q  V  S  P  A  R  A  R  N  S  G  H  F  R  R  S  G  G  S  S  Y  R  C  S  K  V  D  F  R  *  F  H  G  F  *  A  A  K  A  S  L  C  L  P  T  M  G  F  P  T   : G  Y  K  P  W  G  D  T  F  A  L  G  G  L  Q  E  R  G  Y  *  I  V  Q  T  S  N  G  R  K  E  E  A  M  E  T  G  R  Q  L  G  R  F  R  A  C  I  R  C  V  *  R  S  E  T  *  L  E  *  Q  V  W  H  T  D  S  S  S  S  Y  P  Q  S  G  F  V  S  E  V  A  L  E  A  Q  :  G  Y  H  G  S  I  L  Q  R  N  *  E  P  S  N  E  H  Y  M  S  I  G  K  G  F  K  D  G  R  R  G  N  E  R  S  I  Q  *  W  Y  A  D  A  E  D  E  L  L  S  A  L  P  *  A  R  Q  G  N  W  H  K  P  S  F  *  C  R  C  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0100O21.2" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="39132" stop="38878"/>
                    <exon start="38264" stop="38017"/>
                    <exon start="37808" stop="37604"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>708</number_coding_nucleotides>
                  <number_encoded_amino_acids>236</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QEPMDSTPEKLNFGKSLLVPSVQELAKQHLTIIPDRYLRPEQETPVISAGAEVPVIDVQKLISGDSMDSELQKLHSACQQWGFLQVINHGVTPLLLEDFKREVIELFKLPMEEKKKLWKQEDSLEGFGHAFVVSEDQKLDWSDRFGILTLPPHIRKVDLFQKLPSKLRDIMEAYCKEIKSLATSIICQLAKALRMDEEEMRDLFNDGMQTLRMNYYPPCPEPDKAIGISPHSDADA</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="-" PGL_start="43796" PGL_stop="41832"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="43796" e_stop="43522"/>
            <exon e_start="43402" e_stop="43155"/>
            <exon e_start="42894" e_stop="42570"/>
            <exon e_start="42362" e_stop="41832"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.977" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.976" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.989"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="43796" e_stop="43522" e_length="275"/>
          </exon>
          <intron i_serial="1" don_prob="0.977" acc_prob="0.993">
            <gDNA_intron_boundary i_start="43521" i_stop="43403" i_length="119"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="43402" e_stop="43155" e_length="248"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="43154" i_stop="42895" i_length="260"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="42894" e_stop="42570" e_length="325"/>
          </exon>
          <intron i_serial="3" don_prob="0.976" acc_prob="0.999">
            <gDNA_intron_boundary i_start="42569" i_stop="42363" i_length="207"/>
          </intron>
          <exon e_serial="4" e_score="0.989">
            <gDNA_exon_boundary e_start="42362" e_stop="41832" e_length="531"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43796" stop="43522"/>
              <exon start="43402" stop="43249"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303084" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43790" stop="43522"/>
              <exon start="43402" stop="43213"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277411" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43789" stop="43522"/>
              <exon start="43402" stop="43155"/>
              <exon start="42894" stop="42837"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267646" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43771" stop="43522"/>
              <exon start="43402" stop="43218"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E201437" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43732" stop="43522"/>
              <exon start="43402" stop="43184"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E204474" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43729" stop="43522"/>
              <exon start="43402" stop="43337"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E206358" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43726" stop="43522"/>
              <exon start="43402" stop="43155"/>
              <exon start="42894" stop="42677"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E434307" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43246" stop="43155"/>
              <exon start="42894" stop="42570"/>
              <exon start="42362" stop="42103"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296135" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43246" stop="43155"/>
              <exon start="42894" stop="42570"/>
              <exon start="42362" stop="42294"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290167" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42785" stop="42570"/>
              <exon start="42362" stop="41929"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308962" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42735" stop="42570"/>
              <exon start="42362" stop="41832"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E395442" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTATTTTTTCAAGTTTGCAAGAAGAGCAAATGGAGTCAACGCCGGAAAAATTGAACTTTGGAAATTCTCTGTTAGTACCAAGTGTTCAAGAGCTTGCCAAACAGCACCTAACCAATATTCCGGACAGGTATGTCCGCCCACAACAAGAATCTCTGGTCGTATCTTCCGGAGCATCAGTTCCAGTTATCGATCTTCAAAAGTTGATTTCAGGGAATACCATAGATTCTGAGCTACAAAAGCTTCACTCTGCTTGCCAAGAATGGGGTTTCCTACAG : GTTGTAAACCATGGAGTGACACCTTCGTTACTGGAGGACTTCAAGAGAGAGGTTATTCAATTGTTCAAACTTCCAATGGAAGAAAAGAAGAAACTGTGGCAACAGAAAGACAGCTTTGAAGGTTTCGGGCATATGTTTGTTGTATCGGAGGAGCAGAAGCTTGATTGGAGTGACATGTTTGGCATAATAAATCTTCCTCCTCATATCCGCAAAGTGGACTTGTTTCAGAAGTTGCCCTCGAAGCTCAG : AGACATCATGGAAGCATATTCCAAAGAAATCAAGAACCTAACAATGATCATCGTATGTCAATTGGCCAAGGCTTTAAGGATGGATGAAAAAGAAATGCGAGATCTATTCAGTGATGGTATGCAGTCAATAAGGATGAATTATTATCCCCCTTGTCCTGAGCCAGACAGGGCAATTGGCTTAAGCCCTCATTCTGATGCAGATGCCCTCACCATCCTCTTCCAGCTCAATGAAACTGAAGGTCTCCAAGTCCGAAAAGACGATATTTGGGTGCCTATAACGCCCCTCCCAAATGCTTTGATTGTCAATATTGGCGATATGATGGAG : ATAGTGAGCAATGGTGTCTATAGGAGCATTGAGCATAGAGCAATTGTAAACTCATATGAAGAACGTCTCTCTGTTGCAACATTCTACAACATCAACCTTGAGTCCGAGTTAGGACCTGCACACAGCCTTATTGGACCACATAATCCTCCCATTTTCCGAAGAGTTCCTGTGCAAAAATATTTACAGGACTTTTTTGCACGAAAACTTGATGGAAAATCGTATCTTGATTCCATGAAGGTCGACGCGAGGGATGATGAATCATAGGTAGAATCTGATATATGTCTGTCTTGTTGTTGTAATTTGGAGTTCCCCTGTTTTCTATTTGTTAGCTGTATTGACGTGAAGCAAATATTAATATGTGGATTGCTTTAGACACTATATTTTTGGGTTGAGAGGAATTTCCATGAATTTATTTTAGAGGAAAATACACGACTATCCCCTAAAAGTTGCAGTGAAGTCGGATCGTACTAGAGATAAAATTATTTTTAAAAAATAGTAAAGTTAATTTTTTTTCTCGATAAAAACAGAATG</gDNA_template>
            <first_frame> L  F  F  Q  V  C  K  K  S  K  W  S  Q  R  R  K  N  *  T  L  E  I  L  C  *  Y  Q  V  F  K  S  L  P  N  S  T  *  P  I  F  R  T  G  M  S  A  H  N  K  N  L  W  S  Y  L  P  E  H  Q  F  Q  L  S  I  F  K  S  *  F  Q  G  I  P  *  I  L  S  Y  K  S  F  T  L  L  A  K  N  G  V  S  Y  R :   L  *  T  M  E  *  H  L  R  Y  W  R  T  S  R  E  R  L  F  N  C  S  N  F  Q  W  K  K  R  R  N  C  G  N  R  K  T  A  L  K  V  S  G  I  C  L  L  Y  R  R  S  R  S  L  I  G  V  T  C  L  A  *  *  I  F  L  L  I  S  A  K  W  T  C  F  R  S  C  P  R  S  S   : E  T  S  W  K  H  I  P  K  K  S  R  T  *  Q  *  S  S  Y  V  N  W  P  R  L  *  G  W  M  K  K  K  C  E  I  Y  S  V  M  V  C  S  Q  *  G  *  I  I  I  P  L  V  L  S  Q  T  G  Q  L  A  *  A  L  I  L  M  Q  M  P  S  P  S  S  S  S  S  M  K  L  K  V  S  K  S  E  K  T  I  F  G  C  L  *  R  P  S  Q  M  L  *  L  S  I  L  A  I  *  W  R :   *  *  A  M  V  S  I  G  A  L  S  I  E  Q  L  *  T  H  M  K  N  V  S  L  L  Q  H  S  T  T  S  T  L  S  P  S  *  D  L  H  T  A  L  L  D  H  I  I  L  P  F  S  E  E  F  L  C  K  N  I  Y  R  T  F  L  H  E  N  L  M  E  N  R  I  L  I  P  *  R  S  T  R  G  M  M  N  H  R  *  N  L  I  Y  V  C  L  V  V  V  I  W  S  S  P  V  F  Y  L  L  A  V  L  T  *  S  K  Y  *  Y  V  D  C  F  R  H  Y  I  F  G  L  R  G  I  S  M  N  L  F  *  R  K  I  H  D  Y  P  L  K  V  A  V  K  S  D  R  T  R  D  K  I  I  F  K  K  *  *  S  *  F  F  F  S  I  K  T  E   </first_frame>
            <second_frame>  Y  F  F  K  F  A  R  R  A  N  G  V  N  A  G  K  I  E  L  W  K  F  S  V  S  T  K  C  S  R  A  C  Q  T  A  P  N  Q  Y  S  G  Q  V  C  P  P  T  T  R  I  S  G  R  I  F  R  S  I  S  S  S  Y  R  S  S  K  V  D  F  R  E  Y  H  R  F  *  A  T  K  A  S  L  C  L  P  R  M  G  F  P  T   : G  C  K  P  W  S  D  T  F  V  T  G  G  L  Q  E  R  G  Y  S  I  V  Q  T  S  N  G  R  K  E  E  T  V  A  T  E  R  Q  L  *  R  F  R  A  Y  V  C  C  I  G  G  A  E  A  *  L  E  *  H  V  W  H  N  K  S  S  S  S  Y  P  Q  S  G  L  V  S  E  V  A  L  E  A  Q  :  R  H  H  G  S  I  F  Q  R  N  Q  E  P  N  N  D  H  R  M  S  I  G  Q  G  F  K  D  G  *  K  R  N  A  R  S  I  Q  *  W  Y  A  V  N  K  D  E  L  L  S  P  L  S  *  A  R  Q  G  N  W  L  K  P  S  F  *  C  R  C  P  H  H  P  L  P  A  Q  *  N  *  R  S  P  S  P  K  R  R  Y  L  G  A  Y  N  A  P  P  K  C  F  D  C  Q  Y  W  R  Y  D  G   : D  S  E  Q  W  C  L  *  E  H  *  A  *  S  N  C  K  L  I  *  R  T  S  L  C  C  N  I  L  Q  H  Q  P  *  V  R  V  R  T  C  T  Q  P  Y  W  T  T  *  S  S  H  F  P  K  S  S  C  A  K  I  F  T  G  L  F  C  T  K  T  *  W  K  I  V  S  *  F  H  E  G  R  R  E  G  *  *  I  I  G  R  I  *  Y  M  S  V  L  L  L  *  F  G  V  P  L  F  S  I  C  *  L  Y  *  R  E  A  N  I  N  M  W  I  A  L  D  T  I  F  L  G  *  E  E  F  P  *  I  Y  F  R  G  K  Y  T  T  I  P  *  K  L  Q  *  S  R  I  V  L  E  I  K  L  F  L  K  N  S  K  V  N  F  F  S  R  *  K  Q  N  </second_frame>
            <third_frame>   I  F  S  S  L  Q  E  E  Q  M  E  S  T  P  E  K  L  N  F  G  N  S  L  L  V  P  S  V  Q  E  L  A  K  Q  H  L  T  N  I  P  D  R  Y  V  R  P  Q  Q  E  S  L  V  V  S  S  G  A  S  V  P  V  I  D  L  Q  K  L  I  S  G  N  T  I  D  S  E  L  Q  K  L  H  S  A  C  Q  E  W  G  F  L  Q  :  V  V  N  H  G  V  T  P  S  L  L  E  D  F  K  R  E  V  I  Q  L  F  K  L  P  M  E  E  K  K  K  L  W  Q  Q  K  D  S  F  E  G  F  G  H  M  F  V  V  S  E  E  Q  K  L  D  W  S  D  M  F  G  I  I  N  L  P  P  H  I  R  K  V  D  L  F  Q  K  L  P  S  K  L  R :   D  I  M  E  A  Y  S  K  E  I  K  N  L  T  M  I  I  V  C  Q  L  A  K  A  L  R  M  D  E  K  E  M  R  D  L  F  S  D  G  M  Q  S  I  R  M  N  Y  Y  P  P  C  P  E  P  D  R  A  I  G  L  S  P  H  S  D  A  D  A  L  T  I  L  F  Q  L  N  E  T  E  G  L  Q  V  R  K  D  D  I  W  V  P  I  T  P  L  P  N  A  L  I  V  N  I  G  D  M  M  E  :  I  V  S  N  G  V  Y  R  S  I  E  H  R  A  I  V  N  S  Y  E  E  R  L  S  V  A  T  F  Y  N  I  N  L  E  S  E  L  G  P  A  H  S  L  I  G  P  H  N  P  P  I  F  R  R  V  P  V  Q  K  Y  L  Q  D  F  F  A  R  K  L  D  G  K  S  Y  L  D  S  M  K  V  D  A  R  D  D  E  S  *  V  E  S  D  I  C  L  S  C  C  C  N  L  E  F  P  C  F  L  F  V  S  C  I  D  V  K  Q  I  L  I  C  G  L  L  *  T  L  Y  F  W  V  E  R  N  F  H  E  F  I  L  E  E  N  T  R  L  S  P  K  S  C  S  E  V  G  S  Y  *  R  *  N  Y  F  *  K  I  V  K  L  I  F  F  L  D  K  N  R  M </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0100O21.2" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="43794" stop="43522"/>
                    <exon start="43402" stop="43155"/>
                    <exon start="42894" stop="42570"/>
                    <exon start="42362" stop="42099"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1107</number_coding_nucleotides>
                  <number_encoded_amino_acids>369</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IFSSLQEEQMESTPEKLNFGNSLLVPSVQELAKQHLTNIPDRYVRPQQESLVVSSGASVPVIDLQKLISGNTIDSELQKLHSACQEWGFLQVVNHGVTPSLLEDFKREVIQLFKLPMEEKKKLWQQKDSFEGFGHMFVVSEEQKLDWSDMFGIINLPPHIRKVDLFQKLPSKLRDIMEAYSKEIKNLTMIIVCQLAKALRMDEKEMRDLFSDGMQSIRMNYYPPCPEPDRAIGLSPHSDADALTILFQLNETEGLQVRKDDIWVPITPLPNALIVNIGDMMEIVSNGVYRSIEHRAIVNSYEERLSVATFYNINLESELGPAHSLIGPHNPPIFRRVPVQKYLQDFFARKLDGKSYLDSMKVDARDDES*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="43796" e_stop="43522"/>
            <exon e_start="43402" e_stop="43155"/>
            <exon e_start="42894" e_stop="42570"/>
            <exon e_start="42362" e_stop="42032"/>
            <exon e_start="41944" e_stop="41925"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.977" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.976" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.875" e_score="0.903"/>
          <exon-only e_score="0.650"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="43796" e_stop="43522" e_length="275"/>
          </exon>
          <intron i_serial="1" don_prob="0.977" acc_prob="0.993">
            <gDNA_intron_boundary i_start="43521" i_stop="43403" i_length="119"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="43402" e_stop="43155" e_length="248"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="43154" i_stop="42895" i_length="260"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="42894" e_stop="42570" e_length="325"/>
          </exon>
          <intron i_serial="3" don_prob="0.976" acc_prob="0.999">
            <gDNA_intron_boundary i_start="42569" i_stop="42363" i_length="207"/>
          </intron>
          <exon e_serial="4" e_score="0.903">
            <gDNA_exon_boundary e_start="42362" e_stop="42032" e_length="331"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.875">
            <gDNA_intron_boundary i_start="42031" i_stop="41945" i_length="87"/>
          </intron>
          <exon e_serial="5" e_score="0.650">
            <gDNA_exon_boundary e_start="41944" e_stop="41925" e_length="20"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43796" stop="43522"/>
              <exon start="43402" stop="43249"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303084" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43790" stop="43522"/>
              <exon start="43402" stop="43213"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277411" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43789" stop="43522"/>
              <exon start="43402" stop="43155"/>
              <exon start="42894" stop="42837"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267646" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43771" stop="43522"/>
              <exon start="43402" stop="43218"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E201437" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43732" stop="43522"/>
              <exon start="43402" stop="43184"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E204474" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43729" stop="43522"/>
              <exon start="43402" stop="43337"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E206358" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43726" stop="43522"/>
              <exon start="43402" stop="43155"/>
              <exon start="42894" stop="42677"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E434307" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43246" stop="43155"/>
              <exon start="42894" stop="42570"/>
              <exon start="42362" stop="42103"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296135" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43246" stop="43155"/>
              <exon start="42894" stop="42570"/>
              <exon start="42362" stop="42294"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290167" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42842" stop="42570"/>
              <exon start="42362" stop="42032"/>
              <exon start="41944" stop="41925"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E575245" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTATTTTTTCAAGTTTGCAAGAAGAGCAAATGGAGTCAACGCCGGAAAAATTGAACTTTGGAAATTCTCTGTTAGTACCAAGTGTTCAAGAGCTTGCCAAACAGCACCTAACCAATATTCCGGACAGGTATGTCCGCCCACAACAAGAATCTCTGGTCGTATCTTCCGGAGCATCAGTTCCAGTTATCGATCTTCAAAAGTTGATTTCAGGGAATACCATAGATTCTGAGCTACAAAAGCTTCACTCTGCTTGCCAAGAATGGGGTTTCCTACAG : GTTGTAAACCATGGAGTGACACCTTCGTTACTGGAGGACTTCAAGAGAGAGGTTATTCAATTGTTCAAACTTCCAATGGAAGAAAAGAAGAAACTGTGGCAACAGAAAGACAGCTTTGAAGGTTTCGGGCATATGTTTGTTGTATCGGAGGAGCAGAAGCTTGATTGGAGTGACATGTTTGGCATAATAAATCTTCCTCCTCATATCCGCAAAGTGGACTTGTTTCAGAAGTTGCCCTCGAAGCTCAG : AGACATCATGGAAGCATATTCCAAAGAAATCAAGAACCTAACAATGATCATCGTATGTCAATTGGCCAAGGCTTTAAGGATGGATGAAAAAGAAATGCGAGATCTATTCAGTGATGGTATGCAGTCAATAAGGATGAATTATTATCCCCCTTGTCCTGAGCCAGACAGGGCAATTGGCTTAAGCCCTCATTCTGATGCAGATGCCCTCACCATCCTCTTCCAGCTCAATGAAACTGAAGGTCTCCAAGTCCGAAAAGACGATATTTGGGTGCCTATAACGCCCCTCCCAAATGCTTTGATTGTCAATATTGGCGATATGATGGAG : ATAGTGAGCAATGGTGTCTATAGGAGCATTGAGCATAGAGCAATTGTAAACTCATATGAAGAACGTCTCTCTGTTGCAACATTCTACAACATCAACCTTGAGTCCGAGTTAGGACCTGCACACAGCCTTATTGGACCACATAATCCTCCCATTTTCCGAAGAGTTCCTGTGCAAAAATATTTACAGGACTTTTTTGCACGAAAACTTGATGGAAAATCGTATCTTGATTCCATGAAGGTCGACGCGAGGGATGATGAATCATAGGTAGAATCTGATATATGTCTGTCTTGTTGTTGTAATTTGGAGTTCCCCTGTTTTCTATTTGTTAGCT : AGGAAAATACACGACTATCC</gDNA_template>
            <first_frame> L  F  F  Q  V  C  K  K  S  K  W  S  Q  R  R  K  N  *  T  L  E  I  L  C  *  Y  Q  V  F  K  S  L  P  N  S  T  *  P  I  F  R  T  G  M  S  A  H  N  K  N  L  W  S  Y  L  P  E  H  Q  F  Q  L  S  I  F  K  S  *  F  Q  G  I  P  *  I  L  S  Y  K  S  F  T  L  L  A  K  N  G  V  S  Y  R :   L  *  T  M  E  *  H  L  R  Y  W  R  T  S  R  E  R  L  F  N  C  S  N  F  Q  W  K  K  R  R  N  C  G  N  R  K  T  A  L  K  V  S  G  I  C  L  L  Y  R  R  S  R  S  L  I  G  V  T  C  L  A  *  *  I  F  L  L  I  S  A  K  W  T  C  F  R  S  C  P  R  S  S   : E  T  S  W  K  H  I  P  K  K  S  R  T  *  Q  *  S  S  Y  V  N  W  P  R  L  *  G  W  M  K  K  K  C  E  I  Y  S  V  M  V  C  S  Q  *  G  *  I  I  I  P  L  V  L  S  Q  T  G  Q  L  A  *  A  L  I  L  M  Q  M  P  S  P  S  S  S  S  S  M  K  L  K  V  S  K  S  E  K  T  I  F  G  C  L  *  R  P  S  Q  M  L  *  L  S  I  L  A  I  *  W  R :   *  *  A  M  V  S  I  G  A  L  S  I  E  Q  L  *  T  H  M  K  N  V  S  L  L  Q  H  S  T  T  S  T  L  S  P  S  *  D  L  H  T  A  L  L  D  H  I  I  L  P  F  S  E  E  F  L  C  K  N  I  Y  R  T  F  L  H  E  N  L  M  E  N  R  I  L  I  P  *  R  S  T  R  G  M  M  N  H  R  *  N  L  I  Y  V  C  L  V  V  V  I  W  S  S  P  V  F  Y  L  L  A  :  R  K  I  H  D  Y   </first_frame>
            <second_frame>  Y  F  F  K  F  A  R  R  A  N  G  V  N  A  G  K  I  E  L  W  K  F  S  V  S  T  K  C  S  R  A  C  Q  T  A  P  N  Q  Y  S  G  Q  V  C  P  P  T  T  R  I  S  G  R  I  F  R  S  I  S  S  S  Y  R  S  S  K  V  D  F  R  E  Y  H  R  F  *  A  T  K  A  S  L  C  L  P  R  M  G  F  P  T   : G  C  K  P  W  S  D  T  F  V  T  G  G  L  Q  E  R  G  Y  S  I  V  Q  T  S  N  G  R  K  E  E  T  V  A  T  E  R  Q  L  *  R  F  R  A  Y  V  C  C  I  G  G  A  E  A  *  L  E  *  H  V  W  H  N  K  S  S  S  S  Y  P  Q  S  G  L  V  S  E  V  A  L  E  A  Q  :  R  H  H  G  S  I  F  Q  R  N  Q  E  P  N  N  D  H  R  M  S  I  G  Q  G  F  K  D  G  *  K  R  N  A  R  S  I  Q  *  W  Y  A  V  N  K  D  E  L  L  S  P  L  S  *  A  R  Q  G  N  W  L  K  P  S  F  *  C  R  C  P  H  H  P  L  P  A  Q  *  N  *  R  S  P  S  P  K  R  R  Y  L  G  A  Y  N  A  P  P  K  C  F  D  C  Q  Y  W  R  Y  D  G   : D  S  E  Q  W  C  L  *  E  H  *  A  *  S  N  C  K  L  I  *  R  T  S  L  C  C  N  I  L  Q  H  Q  P  *  V  R  V  R  T  C  T  Q  P  Y  W  T  T  *  S  S  H  F  P  K  S  S  C  A  K  I  F  T  G  L  F  C  T  K  T  *  W  K  I  V  S  *  F  H  E  G  R  R  E  G  *  *  I  I  G  R  I  *  Y  M  S  V  L  L  L  *  F  G  V  P  L  F  S  I  C  *  L :   G  K  Y  T  T  I  </second_frame>
            <third_frame>   I  F  S  S  L  Q  E  E  Q  M  E  S  T  P  E  K  L  N  F  G  N  S  L  L  V  P  S  V  Q  E  L  A  K  Q  H  L  T  N  I  P  D  R  Y  V  R  P  Q  Q  E  S  L  V  V  S  S  G  A  S  V  P  V  I  D  L  Q  K  L  I  S  G  N  T  I  D  S  E  L  Q  K  L  H  S  A  C  Q  E  W  G  F  L  Q  :  V  V  N  H  G  V  T  P  S  L  L  E  D  F  K  R  E  V  I  Q  L  F  K  L  P  M  E  E  K  K  K  L  W  Q  Q  K  D  S  F  E  G  F  G  H  M  F  V  V  S  E  E  Q  K  L  D  W  S  D  M  F  G  I  I  N  L  P  P  H  I  R  K  V  D  L  F  Q  K  L  P  S  K  L  R :   D  I  M  E  A  Y  S  K  E  I  K  N  L  T  M  I  I  V  C  Q  L  A  K  A  L  R  M  D  E  K  E  M  R  D  L  F  S  D  G  M  Q  S  I  R  M  N  Y  Y  P  P  C  P  E  P  D  R  A  I  G  L  S  P  H  S  D  A  D  A  L  T  I  L  F  Q  L  N  E  T  E  G  L  Q  V  R  K  D  D  I  W  V  P  I  T  P  L  P  N  A  L  I  V  N  I  G  D  M  M  E  :  I  V  S  N  G  V  Y  R  S  I  E  H  R  A  I  V  N  S  Y  E  E  R  L  S  V  A  T  F  Y  N  I  N  L  E  S  E  L  G  P  A  H  S  L  I  G  P  H  N  P  P  I  F  R  R  V  P  V  Q  K  Y  L  Q  D  F  F  A  R  K  L  D  G  K  S  Y  L  D  S  M  K  V  D  A  R  D  D  E  S  *  V  E  S  D  I  C  L  S  C  C  C  N  L  E  F  P  C  F  L  F  V  S   : *  E  N  T  R  L  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0100O21.2" strand="-"/>
                <serials PGL_serial="10" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="43794" stop="43522"/>
                    <exon start="43402" stop="43155"/>
                    <exon start="42894" stop="42570"/>
                    <exon start="42362" stop="42099"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1107</number_coding_nucleotides>
                  <number_encoded_amino_acids>369</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IFSSLQEEQMESTPEKLNFGNSLLVPSVQELAKQHLTNIPDRYVRPQQESLVVSSGASVPVIDLQKLISGNTIDSELQKLHSACQEWGFLQVVNHGVTPSLLEDFKREVIQLFKLPMEEKKKLWQQKDSFEGFGHMFVVSEEQKLDWSDMFGIINLPPHIRKVDLFQKLPSKLRDIMEAYSKEIKNLTMIIVCQLAKALRMDEKEMRDLFSDGMQSIRMNYYPPCPEPDRAIGLSPHSDADALTILFQLNETEGLQVRKDDIWVPITPLPNALIVNIGDMMEIVSNGVYRSIEHRAIVNSYEERLSVATFYNINLESELGPAHSLIGPHNPPIFRRVPVQKYLQDFFARKLDGKSYLDSMKVDARDDES*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="43796" e_stop="43522"/>
            <exon e_start="43402" e_stop="42958"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.977" acc_prob="0.993" e_score="1.000"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="43796" e_stop="43522" e_length="275"/>
          </exon>
          <intron i_serial="1" don_prob="0.977" acc_prob="0.993">
            <gDNA_intron_boundary i_start="43521" i_stop="43403" i_length="119"/>
          </intron>
          <exon e_serial="2" e_score="0.996">
            <gDNA_exon_boundary e_start="43402" e_stop="42958" e_length="445"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43796" stop="43522"/>
              <exon start="43402" stop="43249"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303084" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43790" stop="43522"/>
              <exon start="43402" stop="43213"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277411" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43771" stop="43522"/>
              <exon start="43402" stop="43218"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E201437" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43733" stop="43522"/>
              <exon start="43402" stop="42958"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E395443" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43732" stop="43522"/>
              <exon start="43402" stop="43184"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E204474" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43729" stop="43522"/>
              <exon start="43402" stop="43337"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E206358" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTATTTTTTCAAGTTTGCAAGAAGAGCAAATGGAGTCAACGCCGGAAAAATTGAACTTTGGAAATTCTCTGTTAGTACCAAGTGTTCAAGAGCTTGCCAAACAGCACCTAACCAATATTCCGGACAGGTATGTCCGCCCACAACAAGAATCTCTGGTCGTATCTTCCGGAGCATCAGTTCCAGTTATCGATCTTCAAAAGTTGATTTCAGGGAATACCATAGATTCTGAGCTACAAAAGCTTCACTCTGCTTGCCAAGAATGGGGTTTCCTACAG : GTTGTAAACCATGGAGTGACACCTTCGTTACTGGAGGACTTCAAGAGAGAGGTTATTCAATTGTTCAAACTTCCAATGGAAGAAAAGAAGAAACTGTGGCAACAGAAAGACAGCTTTGAAGGTTTCGGGCATATGTTTGTTGTATCGGAGGAGCAGAAGCTTGATTGGAGTGACATGTTTGGCATAATAAATCTTCCTCCTCATATCCGCAAAGTGGACTTGTTTCAGAAGTTGCCCTCGAAGCTCAGGTGGCCATCTCCTTACTCTCTCTCAGCACATGCTTACTCGACGCCCTTACTTGTCTTTCTTTTGTATAAGAAAAGTCAAGAAATCGACTTTGTTCAGTTATCTCTACTAGTTTATGAACTATTTAAGCAGTAAACTACTCTATCCAACGGTATCAACCAATTCTTGAAATTTAAATTCGTCCCACAGACCATTTTGT</gDNA_template>
            <first_frame> L  F  F  Q  V  C  K  K  S  K  W  S  Q  R  R  K  N  *  T  L  E  I  L  C  *  Y  Q  V  F  K  S  L  P  N  S  T  *  P  I  F  R  T  G  M  S  A  H  N  K  N  L  W  S  Y  L  P  E  H  Q  F  Q  L  S  I  F  K  S  *  F  Q  G  I  P  *  I  L  S  Y  K  S  F  T  L  L  A  K  N  G  V  S  Y  R :   L  *  T  M  E  *  H  L  R  Y  W  R  T  S  R  E  R  L  F  N  C  S  N  F  Q  W  K  K  R  R  N  C  G  N  R  K  T  A  L  K  V  S  G  I  C  L  L  Y  R  R  S  R  S  L  I  G  V  T  C  L  A  *  *  I  F  L  L  I  S  A  K  W  T  C  F  R  S  C  P  R  S  S  G  G  H  L  L  T  L  S  Q  H  M  L  T  R  R  P  Y  L  S  F  F  C  I  R  K  V  K  K  S  T  L  F  S  Y  L  Y  *  F  M  N  Y  L  S  S  K  L  L  Y  P  T  V  S  T  N  S  *  N  L  N  S  S  H  R  P  F  C </first_frame>
            <second_frame>  Y  F  F  K  F  A  R  R  A  N  G  V  N  A  G  K  I  E  L  W  K  F  S  V  S  T  K  C  S  R  A  C  Q  T  A  P  N  Q  Y  S  G  Q  V  C  P  P  T  T  R  I  S  G  R  I  F  R  S  I  S  S  S  Y  R  S  S  K  V  D  F  R  E  Y  H  R  F  *  A  T  K  A  S  L  C  L  P  R  M  G  F  P  T   : G  C  K  P  W  S  D  T  F  V  T  G  G  L  Q  E  R  G  Y  S  I  V  Q  T  S  N  G  R  K  E  E  T  V  A  T  E  R  Q  L  *  R  F  R  A  Y  V  C  C  I  G  G  A  E  A  *  L  E  *  H  V  W  H  N  K  S  S  S  S  Y  P  Q  S  G  L  V  S  E  V  A  L  E  A  Q  V  A  I  S  L  L  S  L  S  T  C  L  L  D  A  L  T  C  L  S  F  V  *  E  K  S  R  N  R  L  C  S  V  I  S  T  S  L  *  T  I  *  A  V  N  Y  S  I  Q  R  Y  Q  P  I  L  E  I  *  I  R  P  T  D  H  F   </second_frame>
            <third_frame>   I  F  S  S  L  Q  E  E  Q  M  E  S  T  P  E  K  L  N  F  G  N  S  L  L  V  P  S  V  Q  E  L  A  K  Q  H  L  T  N  I  P  D  R  Y  V  R  P  Q  Q  E  S  L  V  V  S  S  G  A  S  V  P  V  I  D  L  Q  K  L  I  S  G  N  T  I  D  S  E  L  Q  K  L  H  S  A  C  Q  E  W  G  F  L  Q  :  V  V  N  H  G  V  T  P  S  L  L  E  D  F  K  R  E  V  I  Q  L  F  K  L  P  M  E  E  K  K  K  L  W  Q  Q  K  D  S  F  E  G  F  G  H  M  F  V  V  S  E  E  Q  K  L  D  W  S  D  M  F  G  I  I  N  L  P  P  H  I  R  K  V  D  L  F  Q  K  L  P  S  K  L  R  W  P  S  P  Y  S  L  S  A  H  A  Y  S  T  P  L  L  V  F  L  L  Y  K  K  S  Q  E  I  D  F  V  Q  L  S  L  L  V  Y  E  L  F  K  Q  *  T  T  L  S  N  G  I  N  Q  F  L  K  F  K  F  V  P  Q  T  I  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0100O21.2" strand="-"/>
                <serials PGL_serial="10" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="43794" stop="43522"/>
                    <exon start="43402" stop="43022"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>651</number_coding_nucleotides>
                  <number_encoded_amino_acids>217</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IFSSLQEEQMESTPEKLNFGNSLLVPSVQELAKQHLTNIPDRYVRPQQESLVVSSGASVPVIDLQKLISGNTIDSELQKLHSACQEWGFLQVVNHGVTPSLLEDFKREVIQLFKLPMEEKKKLWQQKDSFEGFGHMFVVSEEQKLDWSDMFGIINLPPHIRKVDLFQKLPSKLRWPSPYSLSAHAYSTPLLVFLLYKKSQEIDFVQLSLLVYELFKQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="-" PGL_start="53187" PGL_stop="52477"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="53187" e_stop="53015"/>
            <exon e_start="52933" e_stop="52686"/>
            <exon e_start="52565" e_stop="52477"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.990" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.959" acc_prob="0.981" e_score="0.992"/>
          <exon-only e_score="0.966"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="53187" e_stop="53015" e_length="173"/>
          </exon>
          <intron i_serial="1" don_prob="0.990" acc_prob="0.998">
            <gDNA_intron_boundary i_start="53014" i_stop="52934" i_length="81"/>
          </intron>
          <exon e_serial="2" e_score="0.992">
            <gDNA_exon_boundary e_start="52933" e_stop="52686" e_length="248"/>
          </exon>
          <intron i_serial="2" don_prob="0.959" acc_prob="0.981">
            <gDNA_intron_boundary i_start="52685" i_stop="52566" i_length="120"/>
          </intron>
          <exon e_serial="3" e_score="0.966">
            <gDNA_exon_boundary e_start="52565" e_stop="52477" e_length="89"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53187" stop="53015"/>
              <exon start="52933" stop="52686"/>
              <exon start="52565" stop="52477"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E203756" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TAGCAGCCATTCCATCGCGATATATTCGTGATGATTTAGAAAAGACATCCTGTTCCATATTAATGCCTCAAGTTCCAGTGATTGATATGGAAAAACTGCTGATAATTGGAGATCATGATACCGCAGAGCTTGAGAGGCTTCATTTTGCTTGCAAAGAATGGGGATTTTTTCAG : GTGGTGAATCATGGGGTGAGTTCATTGTTGTTGGAGAAAGTGAAGTCAGAAATCCGAGCATTTTTCGATCTACCAATGGAAGAGAAGAAGAAGTTTGATCAACAAGAAGGGGACGTTGAAGGATTTGGACAAGCTTTTGTTTTTTCTCAAGAGCAAAAGTTAGATTGGGGTGACTTGTTTTACATGACCACTCTCCCTACTAATTTGAGAAAACCTCATTTATTTCCCAAGCTCCCTCACTCACTTAG : GGAGACCATGGAAGAACATAGCAAGGAATTTAAGAACCTAGCCATAAGGATCTTGTGTCAATTGGCAAAGGTTTTAGGGATGGATGAAA</gDNA_template>
            <first_frame> *  Q  P  F  H  R  D  I  F  V  M  I  *  K  R  H  P  V  P  Y  *  C  L  K  F  Q  *  L  I  W  K  N  C  *  *  L  E  I  M  I  P  Q  S  L  R  G  F  I  L  L  A  K  N  G  D  F  F  R :   W  *  I  M  G  *  V  H  C  C  W  R  K  *  S  Q  K  S  E  H  F  S  I  Y  Q  W  K  R  R  R  S  L  I  N  K  K  G  T  L  K  D  L  D  K  L  L  F  F  L  K  S  K  S  *  I  G  V  T  C  F  T  *  P  L  S  L  L  I  *  E  N  L  I  Y  F  P  S  S  L  T  H  L   : G  R  P  W  K  N  I  A  R  N  L  R  T  *  P  *  G  S  C  V  N  W  Q  R  F  *  G  W  M  K </first_frame>
            <second_frame>  S  S  H  S  I  A  I  Y  S  *  *  F  R  K  D  I  L  F  H  I  N  A  S  S  S  S  D  *  Y  G  K  T  A  D  N  W  R  S  *  Y  R  R  A  *  E  A  S  F  C  L  Q  R  M  G  I  F  S   : G  G  E  S  W  G  E  F  I  V  V  G  E  S  E  V  R  N  P  S  I  F  R  S  T  N  G  R  E  E  E  V  *  S  T  R  R  G  R  *  R  I  W  T  S  F  C  F  F  S  R  A  K  V  R  L  G  *  L  V  L  H  D  H  S  P  Y  *  F  E  K  T  S  F  I  S  Q  A  P  S  L  T  *  :  G  D  H  G  R  T  *  Q  G  I  *  E  P  S  H  K  D  L  V  S  I  G  K  G  F  R  D  G  *   </second_frame>
            <third_frame>   A  A  I  P  S  R  Y  I  R  D  D  L  E  K  T  S  C  S  I  L  M  P  Q  V  P  V  I  D  M  E  K  L  L  I  I  G  D  H  D  T  A  E  L  E  R  L  H  F  A  C  K  E  W  G  F  F  Q  :  V  V  N  H  G  V  S  S  L  L  L  E  K  V  K  S  E  I  R  A  F  F  D  L  P  M  E  E  K  K  K  F  D  Q  Q  E  G  D  V  E  G  F  G  Q  A  F  V  F  S  Q  E  Q  K  L  D  W  G  D  L  F  Y  M  T  T  L  P  T  N  L  R  K  P  H  L  F  P  K  L  P  H  S  L  R :   E  T  M  E  E  H  S  K  E  F  K  N  L  A  I  R  I  L  C  Q  L  A  K  V  L  G  M  D  E  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0100O21.2" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="53185" stop="53015"/>
                    <exon start="52933" stop="52686"/>
                    <exon start="52565" stop="52478"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>507</number_coding_nucleotides>
                  <number_encoded_amino_acids>169</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AAIPSRYIRDDLEKTSCSILMPQVPVIDMEKLLIIGDHDTAELERLHFACKEWGFFQVVNHGVSSLLLEKVKSEIRAFFDLPMEEKKKFDQQEGDVEGFGQAFVFSQEQKLDWGDLFYMTTLPTNLRKPHLFPKLPHSLRETMEEHSKEFKNLAIRILCQLAKVLGMDE</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="59028" PGL_stop="58164"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="59028" e_stop="58957"/>
            <exon e_start="58872" e_stop="58164"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.961" acc_prob="0.929" e_score="1.000"/>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="59028" e_stop="58957" e_length="72"/>
          </exon>
          <intron i_serial="1" don_prob="0.961" acc_prob="0.929">
            <gDNA_intron_boundary i_start="58956" i_stop="58873" i_length="84"/>
          </intron>
          <exon e_serial="2" e_score="0.999">
            <gDNA_exon_boundary e_start="58872" e_stop="58164" e_length="709"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59028" stop="58957"/>
              <exon start="58872" stop="58196"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E543445" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58610" stop="58164"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E544979" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58610" stop="58164"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E544980" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58609" stop="58164"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308911" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TAATTGCACTCTTAAAATCAGTTCATCCAGATTGGAGTAGTGCTGCAATCAGATCTGCTCTAATGACCACAT : CAACAATGAATAATGTGGTTGGTCAGCCAATAAAAAATGCCACAGGGGATGATGCAAGCCCGTTCGAATACGGATCAGGACATTTCAGGCCATCAAGAGCAGTAGATCCTGGACTCGTTTATGATGCTACATACACGGATTATCTTCTCTATCTATGCACTCAAAACGTAAGCCTAGATTCATCGTTCAGTTGTCCTGAGAAAATACCTACGGCGAGTAACCTTAACTATCCATCCCTTGCAATAGCAAACATGAGAGGAGGATCTATCAGGAGTGTCACAAGAGTTGTTACAAATGTTGGAAAAGATAACTCGACTTACGTTTTAGGTGTGAGTTCACCTCCTGGATACGTTGTTGATATTGTTCCAAAGAGGTTACATTTCAGCAAATTGGGAGAGAAACACAGCTTCAACATAACAATTACTAGTGTTCAAAGGAGAAATGATTTTTCGTTTGGTTGGTACACATGGAGTGACGGAGTCCATGTAGTTCGTAGTCCAATTGCAGTATCCTCAGCGTAATTAAATCATGCAATTGTGAATAAATAGTACCCAAAAATAATTTTACTAATGTATATCTAGAGCATGATATTATGAAGTTCCCAAACAAAACTTGTATTCTATATTTTCTCATATAAACAAAAATATCAAAATAGTCTCAATATCAAATAAATAAAAATTTATAAAATCACATAATAAGTTATTACAAA</gDNA_template>
            <first_frame> *  L  H  S  *  N  Q  F  I  Q  I  G  V  V  L  Q  S  D  L  L  *  *  P  H  :  Q  Q  *  I  M  W  L  V  S  Q  *  K  M  P  Q  G  M  M  Q  A  R  S  N  T  D  Q  D  I  S  G  H  Q  E  Q  *  I  L  D  S  F  M  M  L  H  T  R  I  I  F  S  I  Y  A  L  K  T  *  A  *  I  H  R  S  V  V  L  R  K  Y  L  R  R  V  T  L  T  I  H  P  L  Q  *  Q  T  *  E  E  D  L  S  G  V  S  Q  E  L  L  Q  M  L  E  K  I  T  R  L  T  F  *  V  *  V  H  L  L  D  T  L  L  I  L  F  Q  R  G  Y  I  S  A  N  W  E  R  N  T  A  S  T  *  Q  L  L  V  F  K  G  E  M  I  F  R  L  V  G  T  H  G  V  T  E  S  M  *  F  V  V  Q  L  Q  Y  P  Q  R  N  *  I  M  Q  L  *  I  N  S  T  Q  K  *  F  Y  *  C  I  S  R  A  *  Y  Y  E  V  P  K  Q  N  L  Y  S  I  F  S  H  I  N  K  N  I  K  I  V  S  I  S  N  K  *  K  F  I  K  S  H  N  K  L  L  Q  </first_frame>
            <second_frame>  N  C  T  L  K  I  S  S  S  R  L  E  *  C  C  N  Q  I  C  S  N  D  H  I :   N  N  E  *  C  G  W  S  A  N  K  K  C  H  R  G  *  C  K  P  V  R  I  R  I  R  T  F  Q  A  I  K  S  S  R  S  W  T  R  L  *  C  Y  I  H  G  L  S  S  L  S  M  H  S  K  R  K  P  R  F  I  V  Q  L  S  *  E  N  T  Y  G  E  *  P  *  L  S  I  P  C  N  S  K  H  E  R  R  I  Y  Q  E  C  H  K  S  C  Y  K  C  W  K  R  *  L  D  L  R  F  R  C  E  F  T  S  W  I  R  C  *  Y  C  S  K  E  V  T  F  Q  Q  I  G  R  E  T  Q  L  Q  H  N  N  Y  *  C  S  K  E  K  *  F  F  V  W  L  V  H  M  E  *  R  S  P  C  S  S  *  S  N  C  S  I  L  S  V  I  K  S  C  N  C  E  *  I  V  P  K  N  N  F  T  N  V  Y  L  E  H  D  I  M  K  F  P  N  K  T  C  I  L  Y  F  L  I  *  T  K  I  S  K  *  S  Q  Y  Q  I  N  K  N  L  *  N  H  I  I  S  Y  Y  K </second_frame>
            <third_frame>   I  A  L  L  K  S  V  H  P  D  W  S  S  A  A  I  R  S  A  L  M  T  T   : S  T  M  N  N  V  V  G  Q  P  I  K  N  A  T  G  D  D  A  S  P  F  E  Y  G  S  G  H  F  R  P  S  R  A  V  D  P  G  L  V  Y  D  A  T  Y  T  D  Y  L  L  Y  L  C  T  Q  N  V  S  L  D  S  S  F  S  C  P  E  K  I  P  T  A  S  N  L  N  Y  P  S  L  A  I  A  N  M  R  G  G  S  I  R  S  V  T  R  V  V  T  N  V  G  K  D  N  S  T  Y  V  L  G  V  S  S  P  P  G  Y  V  V  D  I  V  P  K  R  L  H  F  S  K  L  G  E  K  H  S  F  N  I  T  I  T  S  V  Q  R  R  N  D  F  S  F  G  W  Y  T  W  S  D  G  V  H  V  V  R  S  P  I  A  V  S  S  A  *  L  N  H  A  I  V  N  K  *  Y  P  K  I  I  L  L  M  Y  I  *  S  M  I  L  *  S  S  Q  T  K  L  V  F  Y  I  F  S  Y  K  Q  K  Y  Q  N  S  L  N  I  K  *  I  K  I  Y  K  I  T  *  *  V  I  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0100O21.2" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="59026" stop="58957"/>
                    <exon start="58872" stop="58352"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>588</number_coding_nucleotides>
                  <number_encoded_amino_acids>196</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IALLKSVHPDWSSAAIRSALMTTSTMNNVVGQPIKNATGDDASPFEYGSGHFRPSRAVDPGLVYDATYTDYLLYLCTQNVSLDSSFSCPEKIPTASNLNYPSLAIANMRGGSIRSVTRVVTNVGKDNSTYVLGVSSPPGYVVDIVPKRLHFSKLGEKHSFNITITSVQRRNDFSFGWYTWSDGVHVVRSPIAVSSA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="60376" PGL_stop="59426"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="60376" e_stop="59851"/>
            <exon e_start="59765" e_stop="59668"/>
            <exon e_start="59590" e_stop="59426"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.960" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.908" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="60376" e_stop="59851" e_length="526"/>
          </exon>
          <intron i_serial="1" don_prob="0.960" acc_prob="0.992">
            <gDNA_intron_boundary i_start="59850" i_stop="59766" i_length="85"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="59765" e_stop="59668" e_length="98"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.908">
            <gDNA_intron_boundary i_start="59667" i_stop="59591" i_length="77"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="59590" e_stop="59426" e_length="165"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60376" stop="59851"/>
              <exon start="59765" stop="59668"/>
              <exon start="59590" stop="59426"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E543446" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60375" stop="59858"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E301440" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60232" stop="59851"/>
              <exon start="59765" stop="59668"/>
              <exon start="59590" stop="59497"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E305349" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGCAGCAGTTGGTCCTCTTAACGAGACAAGGGACTTTCGATCACCGAGAGATGTAGATGGTCATGGTACTCATACAGCAGGCACAGTGGGTGGTAGGAGAGTAGCAAATGCATCAGCTATTGGTGGATTTGCAAAGGGTACAGCTATTGGAGGCGCCCCTAATGTTCGACTGGCCATTTATAAAGTATGTTGGCCAGTTCCAGATCAGAGTTTAGCTGACGGAAATGCATGTGCTACGGATGACATTCTTGCTGCTTTTGATGATGCTATAGCTGATGGGGTTCATGTACTCAGTATTTCTCTAGGGTCTCTACCTACATCAACCTACTATACAGAAAATCCTATTGCGGTTGGATCTTTGCATGCCGTGAAGAAGAATATTGTAGTATCTTGTAGTGCTGGAAATGATGGTCCAACACCTTCAACTGTTGGAAATGTAGCGCCGTGGGTTATCACAGTTGGTGCTAGTAGCATCGATCGAGTCTTTTCATCTCCAATTATGCTCGGAAATGGAATGATCGTTGAG : GGTCAAACAGTAACTCCAATAAGGAGGAGGAGATTGCATCCTTTGGTTTATGCAGGAGATGTAGAAATTAGAGGAATTACGGCGAGCAATACAACAGG : AACATGTCTTCCTGGTACACTATCAAGAAATCTTGTGAGAGGAAAAGTTGTCCTCTGCGGAAATACAGGTATACAGGCATCAATGGAAGTGAAAAGAGCTGGAGGTGTTGCCGCTATTTTAGGAAATCCATTTAACGAGATTAAAGTCACCCCTTATCTGGATCC</gDNA_template>
            <first_frame> G  S  S  W  S  S  *  R  D  K  G  L  S  I  T  E  R  C  R  W  S  W  Y  S  Y  S  R  H  S  G  W  *  E  S  S  K  C  I  S  Y  W  W  I  C  K  G  Y  S  Y  W  R  R  P  *  C  S  T  G  H  L  *  S  M  L  A  S  S  R  S  E  F  S  *  R  K  C  M  C  Y  G  *  H  S  C  C  F  *  *  C  Y  S  *  W  G  S  C  T  Q  Y  F  S  R  V  S  T  Y  I  N  L  L  Y  R  K  S  Y  C  G  W  I  F  A  C  R  E  E  E  Y  C  S  I  L  *  C  W  K  *  W  S  N  T  F  N  C  W  K  C  S  A  V  G  Y  H  S  W  C  *  *  H  R  S  S  L  F  I  S  N  Y  A  R  K  W  N  D  R  *   : G  S  N  S  N  S  N  K  E  E  E  I  A  S  F  G  L  C  R  R  C  R  N  *  R  N  Y  G  E  Q  Y  N  R  :  N  M  S  S  W  Y  T  I  K  K  S  C  E  R  K  S  C  P  L  R  K  Y  R  Y  T  G  I  N  G  S  E  K  S  W  R  C  C  R  Y  F  R  K  S  I  *  R  D  *  S  H  P  L  S  G  S </first_frame>
            <second_frame>  A  A  V  G  P  L  N  E  T  R  D  F  R  S  P  R  D  V  D  G  H  G  T  H  T  A  G  T  V  G  G  R  R  V  A  N  A  S  A  I  G  G  F  A  K  G  T  A  I  G  G  A  P  N  V  R  L  A  I  Y  K  V  C  W  P  V  P  D  Q  S  L  A  D  G  N  A  C  A  T  D  D  I  L  A  A  F  D  D  A  I  A  D  G  V  H  V  L  S  I  S  L  G  S  L  P  T  S  T  Y  Y  T  E  N  P  I  A  V  G  S  L  H  A  V  K  K  N  I  V  V  S  C  S  A  G  N  D  G  P  T  P  S  T  V  G  N  V  A  P  W  V  I  T  V  G  A  S  S  I  D  R  V  F  S  S  P  I  M  L  G  N  G  M  I  V  E  :  G  Q  T  V  T  P  I  R  R  R  R  L  H  P  L  V  Y  A  G  D  V  E  I  R  G  I  T  A  S  N  T  T  G :   T  C  L  P  G  T  L  S  R  N  L  V  R  G  K  V  V  L  C  G  N  T  G  I  Q  A  S  M  E  V  K  R  A  G  G  V  A  A  I  L  G  N  P  F  N  E  I  K  V  T  P  Y  L  D   </second_frame>
            <third_frame>   Q  Q  L  V  L  L  T  R  Q  G  T  F  D  H  R  E  M  *  M  V  M  V  L  I  Q  Q  A  Q  W  V  V  G  E  *  Q  M  H  Q  L  L  V  D  L  Q  R  V  Q  L  L  E  A  P  L  M  F  D  W  P  F  I  K  Y  V  G  Q  F  Q  I  R  V  *  L  T  E  M  H  V  L  R  M  T  F  L  L  L  L  M  M  L  *  L  M  G  F  M  Y  S  V  F  L  *  G  L  Y  L  H  Q  P  T  I  Q  K  I  L  L  R  L  D  L  C  M  P  *  R  R  I  L  *  Y  L  V  V  L  E  M  M  V  Q  H  L  Q  L  L  E  M  *  R  R  G  L  S  Q  L  V  L  V  A  S  I  E  S  F  H  L  Q  L  C  S  E  M  E  *  S  L  R :   V  K  Q  *  L  Q  *  G  G  G  D  C  I  L  W  F  M  Q  E  M  *  K  L  E  E  L  R  R  A  I  Q  Q   : E  H  V  F  L  V  H  Y  Q  E  I  L  *  E  E  K  L  S  S  A  E  I  Q  V  Y  R  H  Q  W  K  *  K  E  L  E  V  L  P  L  F  *  E  I  H  L  T  R  L  K  S  P  L  I  W  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0100O21.2" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="60375" stop="59851"/>
                    <exon start="59765" stop="59668"/>
                    <exon start="59590" stop="59428"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>786</number_coding_nucleotides>
                  <number_encoded_amino_acids>262</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AAVGPLNETRDFRSPRDVDGHGTHTAGTVGGRRVANASAIGGFAKGTAIGGAPNVRLAIYKVCWPVPDQSLADGNACATDDILAAFDDAIADGVHVLSISLGSLPTSTYYTENPIAVGSLHAVKKNIVVSCSAGNDGPTPSTVGNVAPWVITVGASSIDRVFSSPIMLGNGMIVEGQTVTPIRRRRLHPLVYAGDVEIRGITASNTTGTCLPGTLSRNLVRGKVVLCGNTGIQASMEVKRAGGVAAILGNPFNEIKVTPYLD</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="+" PGL_start="64511" PGL_stop="67415"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="64511" e_stop="64598"/>
            <exon e_start="65187" e_stop="65304"/>
            <exon e_start="65451" e_stop="65546"/>
            <exon e_start="65626" e_stop="65705"/>
            <exon e_start="65913" e_stop="66006"/>
            <exon e_start="66135" e_stop="66278"/>
            <exon e_start="66992" e_stop="67204"/>
            <exon e_start="67382" e_stop="67415"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.983" acc_prob="0.981" e_score="0.977"/>
          <exon-intron don_prob="0.894" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.690" acc_prob="0.857" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="0.879" acc_prob="0.981" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.977">
            <gDNA_exon_boundary e_start="64511" e_stop="64598" e_length="88"/>
          </exon>
          <intron i_serial="1" don_prob="0.983" acc_prob="0.981">
            <gDNA_intron_boundary i_start="64599" i_stop="65186" i_length="588"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="65187" e_stop="65304" e_length="118"/>
          </exon>
          <intron i_serial="2" don_prob="0.894" acc_prob="0.000">
            <gDNA_intron_boundary i_start="65305" i_stop="65450" i_length="146"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="65451" e_stop="65546" e_length="96"/>
          </exon>
          <intron i_serial="3" don_prob="0.690" acc_prob="0.857">
            <gDNA_intron_boundary i_start="65547" i_stop="65625" i_length="79"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="65626" e_stop="65705" e_length="80"/>
          </exon>
          <intron i_serial="4" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="65706" i_stop="65912" i_length="207"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="65913" e_stop="66006" e_length="94"/>
          </exon>
          <intron i_serial="5" don_prob="0.997" acc_prob="0.986">
            <gDNA_intron_boundary i_start="66007" i_stop="66134" i_length="128"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="66135" e_stop="66278" e_length="144"/>
          </exon>
          <intron i_serial="6" don_prob="0.879" acc_prob="0.981">
            <gDNA_intron_boundary i_start="66279" i_stop="66991" i_length="713"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="66992" e_stop="67204" e_length="213"/>
          </exon>
          <intron i_serial="7" don_prob="0.994" acc_prob="0.999">
            <gDNA_intron_boundary i_start="67205" i_stop="67381" i_length="177"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="67382" e_stop="67415" e_length="34"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64511" stop="64598"/>
              <exon start="65187" stop="65304"/>
              <exon start="65451" stop="65546"/>
              <exon start="65626" stop="65705"/>
              <exon start="65913" stop="66006"/>
              <exon start="66135" stop="66278"/>
              <exon start="66992" stop="67204"/>
              <exon start="67382" stop="67415"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E707126" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CACAACTCTACGCCGGCCGCCACTCTCTTCACCCAGTTTCTTTCTCCGGCCAACTTATTCCGAGCAGTTTCTACTGAGAAATGGAATT : CTTCGAAACTTGGGATAATAGGCCCGTCTTTTGACCCTTATCTGCTTAAATACAAGGTTTGGCTCCACAACCAAGTTATTCAGCTATCCCTAATTATCCATCATTCTCGCTGAAACTG : AACTGCTGTGCTAGAATGGGAGGTTCTCTACAATTTCACTTCTTCAGTTGCAACATTTTGCTAAAGGGAATAAACTCAACCGGGTTATCGGATAAG : TTAAATGTATCCTCTGCTCTTAAACATTCCAAGAAGCAGGGTGAACTTTCTCTTACTATCTCTGATGCTGCTGATCAGAA : GAAAGTTCAGAAGGCTGGAAAAGTAGAACATCACTTATGGAAGAAAAGAGAATCTGCTGGATCTGGACAAAAAGCGCTGAATCTTGTTCGAATT : ATTTCTGGACTTCCAAATGAGAAAGAGTCTGTTTATGGTGCATTAGATAAATGGATTGCATGGGAGACAGAGTTTCCATTGATTGCAGCTGCTAAGGCTCTAAGAATCTTAAGGCAACAACGGCTGTGGAAACGAGTGATTCAA : GTAGCTAAGTGGATGTTGAGCAAAGGTCAAGGTGCAACAATGGCAACCTATGATGCACTTCTACTAGCATTTGATATGGACAACAGGGTAGATGAAGCAGAAACGTTATGGAATATGATTTTGCATACAAGCACACGGTCTGTTTCGAAACGGCTCTTCTCCAGGATGATTTCATTATATGATCATCATCATGTGCCAGACAAGATAGTTGAG : GTGTTTGCAGACATGGAGGAGTTGGGGGTAAAAC</gDNA_template>
            <first_frame> H  N  S  T  P  A  A  T  L  F  T  Q  F  L  S  P  A  N  L  F  R  A  V  S  T  E  K  W  N   : S  S  K  L  G  I  I  G  P  S  F  D  P  Y  L  L  K  Y  K  V  W  L  H  N  Q  V  I  Q  L  S  L  I  I  H  H  S  R  *  N  * :   T  A  V  L  E  W  E  V  L  Y  N  F  T  S  S  V  A  T  F  C  *  R  E  *  T  Q  P  G  Y  R  I  S :   *  M  Y  P  L  L  L  N  I  P  R  S  R  V  N  F  L  L  L  S  L  M  L  L  I  R   : R  K  F  R  R  L  E  K  *  N  I  T  Y  G  R  K  E  N  L  L  D  L  D  K  K  R  *  I  L  F  E  L :   F  L  D  F  Q  M  R  K  S  L  F  M  V  H  *  I  N  G  L  H  G  R  Q  S  F  H  *  L  Q  L  L  R  L  *  E  S  *  G  N  N  G  C  G  N  E  *  F  K :   *  L  S  G  C  *  A  K  V  K  V  Q  Q  W  Q  P  M  M  H  F  Y  *  H  L  I  W  T  T  G  *  M  K  Q  K  R  Y  G  I  *  F  C  I  Q  A  H  G  L  F  R  N  G  S  S  P  G  *  F  H  Y  M  I  I  I  M  C  Q  T  R  *  L  R :   C  L  Q  T  W  R  S  W  G  *  N </first_frame>
            <second_frame>  T  T  L  R  R  P  P  L  S  S  P  S  F  F  L  R  P  T  Y  S  E  Q  F  L  L  R  N  G  I  :  L  R  N  L  G  *  *  A  R  L  L  T  L  I  C  L  N  T  R  F  G  S  T  T  K  L  F  S  Y  P  *  L  S  I  I  L  A  E  T   : E  L  L  C  *  N  G  R  F  S  T  I  S  L  L  Q  L  Q  H  F  A  K  G  N  K  L  N  R  V  I  G  *   : V  K  C  I  L  C  S  *  T  F  Q  E  A  G  *  T  F  S  Y  Y  L  *  C  C  *  S  E  :  E  S  S  E  G  W  K  S  R  T  S  L  M  E  E  K  R  I  C  W  I  W  T  K  S  A  E  S  C  S  N   : Y  F  W  T  S  K  *  E  R  V  C  L  W  C  I  R  *  M  D  C  M  G  D  R  V  S  I  D  C  S  C  *  G  S  K  N  L  K  A  T  T  A  V  E  T  S  D  S   : S  S  *  V  D  V  E  Q  R  S  R  C  N  N  G  N  L  *  C  T  S  T  S  I  *  Y  G  Q  Q  G  R  *  S  R  N  V  M  E  Y  D  F  A  Y  K  H  T  V  C  F  E  T  A  L  L  Q  D  D  F  I  I  *  S  S  S  C  A  R  Q  D  S  *   : G  V  C  R  H  G  G  V  G  G  K   </second_frame>
            <third_frame>   Q  L  Y  A  G  R  H  S  L  H  P  V  S  F  S  G  Q  L  I  P  S  S  F  Y  *  E  M  E  F :   F  E  T  W  D  N  R  P  V  F  *  P  L  S  A  *  I  Q  G  L  A  P  Q  P  S  Y  S  A  I  P  N  Y  P  S  F  S  L  K  L  :  N  C  C  A  R  M  G  G  S  L  Q  F  H  F  F  S  C  N  I  L  L  K  G  I  N  S  T  G  L  S  D  K  :  L  N  V  S  S  A  L  K  H  S  K  K  Q  G  E  L  S  L  T  I  S  D  A  A  D  Q  K :   K  V  Q  K  A  G  K  V  E  H  H  L  W  K  K  R  E  S  A  G  S  G  Q  K  A  L  N  L  V  R  I  :  I  S  G  L  P  N  E  K  E  S  V  Y  G  A  L  D  K  W  I  A  W  E  T  E  F  P  L  I  A  A  A  K  A  L  R  I  L  R  Q  Q  R  L  W  K  R  V  I  Q  :  V  A  K  W  M  L  S  K  G  Q  G  A  T  M  A  T  Y  D  A  L  L  L  A  F  D  M  D  N  R  V  D  E  A  E  T  L  W  N  M  I  L  H  T  S  T  R  S  V  S  K  R  L  F  S  R  M  I  S  L  Y  D  H  H  H  V  P  D  K  I  V  E  :  V  F  A  D  M  E  E  L  G  V  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0100O21.2" strand="+"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="65236" stop="65304"/>
                    <exon start="65451" stop="65546"/>
                    <exon start="65626" stop="65705"/>
                    <exon start="65913" stop="66006"/>
                    <exon start="66135" stop="66278"/>
                    <exon start="66992" stop="67204"/>
                    <exon start="67382" stop="67414"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>729</number_coding_nucleotides>
                  <number_encoded_amino_acids>243</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IQGLAPQPSYSAIPNYPSFSLKLNCCARMGGSLQFHFFSCNILLKGINSTGLSDKLNVSSALKHSKKQGELSLTISDAADQKKVQKAGKVEHHLWKKRESAGSGQKALNLVRIISGLPNEKESVYGALDKWIAWETEFPLIAAAKALRILRQQRLWKRVIQVAKWMLSKGQGATMATYDALLLAFDMDNRVDEAETLWNMILHTSTRSVSKRLFSRMISLYDHHHVPDKIVEVFADMEELGVK</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="65190" e_stop="65546"/>
            <exon e_start="65626" e_stop="65705"/>
            <exon e_start="65913" e_stop="66006"/>
            <exon e_start="66135" e_stop="66143"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.690" acc_prob="0.857" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.986" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="65190" e_stop="65546" e_length="357"/>
          </exon>
          <intron i_serial="1" don_prob="0.690" acc_prob="0.857">
            <gDNA_intron_boundary i_start="65547" i_stop="65625" i_length="79"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="65626" e_stop="65705" e_length="80"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="65706" i_stop="65912" i_length="207"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="65913" e_stop="66006" e_length="94"/>
          </exon>
          <intron i_serial="3" don_prob="0.997" acc_prob="0.986">
            <gDNA_intron_boundary i_start="66007" i_stop="66134" i_length="128"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="66135" e_stop="66143" e_length="9"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65190" stop="65546"/>
              <exon start="65626" stop="65705"/>
              <exon start="65913" stop="66006"/>
              <exon start="66135" stop="66143"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E275573" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CGAAACTTGGGATAATAGGCCCGTCTTTTGACCCTTATCTGCTTAAATACAAGGTTTGGCTCCACAACCAAGTTATTCAGCTATCCCTAATTATCCATCATTCTCGCTGAAACTGGTAATACATATTGGTATTTTCTTTTTACATATAAGTCAGTTAATGCTAATAGTTTTGAGTTACAAATTTTATAATTTGCTTCTTTAAGAACCATTCTTGCTTATGAGAGTCCCCTGATGTGTATATTTGGGAAGAATTTATTTTAGAACTGCTGTGCTAGAATGGGAGGTTCTCTACAATTTCACTTCTTCAGTTGCAACATTTTGCTAAAGGGAATAAACTCAACCGGGTTATCGGATAAG : TTAAATGTATCCTCTGCTCTTAAACATTCCAAGAAGCAGGGTGAACTTTCTCTTACTATCTCTGATGCTGCTGATCAGAA : GAAAGTTCAGAAGGCTGGAAAAGTAGAACATCACTTATGGAAGAAAAGAGAATCTGCTGGATCTGGACAAAAAGCGCTGAATCTTGTTCGAATT : ATTTCTGGA</gDNA_template>
            <first_frame> R  N  L  G  *  *  A  R  L  L  T  L  I  C  L  N  T  R  F  G  S  T  T  K  L  F  S  Y  P  *  L  S  I  I  L  A  E  T  G  N  T  Y  W  Y  F  L  F  T  Y  K  S  V  N  A  N  S  F  E  L  Q  I  L  *  F  A  S  L  R  T  I  L  A  Y  E  S  P  L  M  C  I  F  G  K  N  L  F  *  N  C  C  A  R  M  G  G  S  L  Q  F  H  F  F  S  C  N  I  L  L  K  G  I  N  S  T  G  L  S  D  K  :  L  N  V  S  S  A  L  K  H  S  K  K  Q  G  E  L  S  L  T  I  S  D  A  A  D  Q  K :   K  V  Q  K  A  G  K  V  E  H  H  L  W  K  K  R  E  S  A  G  S  G  Q  K  A  L  N  L  V  R  I  :  I  S  G </first_frame>
            <second_frame>  E  T  W  D  N  R  P  V  F  *  P  L  S  A  *  I  Q  G  L  A  P  Q  P  S  Y  S  A  I  P  N  Y  P  S  F  S  L  K  L  V  I  H  I  G  I  F  F  L  H  I  S  Q  L  M  L  I  V  L  S  Y  K  F  Y  N  L  L  L  *  E  P  F  L  L  M  R  V  P  *  C  V  Y  L  G  R  I  Y  F  R  T  A  V  L  E  W  E  V  L  Y  N  F  T  S  S  V  A  T  F  C  *  R  E  *  T  Q  P  G  Y  R  I  S :   *  M  Y  P  L  L  L  N  I  P  R  S  R  V  N  F  L  L  L  S  L  M  L  L  I  R   : R  K  F  R  R  L  E  K  *  N  I  T  Y  G  R  K  E  N  L  L  D  L  D  K  K  R  *  I  L  F  E  L :   F  L   </second_frame>
            <third_frame>   K  L  G  I  I  G  P  S  F  D  P  Y  L  L  K  Y  K  V  W  L  H  N  Q  V  I  Q  L  S  L  I  I  H  H  S  R  *  N  W  *  Y  I  L  V  F  S  F  Y  I  *  V  S  *  C  *  *  F  *  V  T  N  F  I  I  C  F  F  K  N  H  S  C  L  *  E  S  P  D  V  Y  I  W  E  E  F  I  L  E  L  L  C  *  N  G  R  F  S  T  I  S  L  L  Q  L  Q  H  F  A  K  G  N  K  L  N  R  V  I  G  *   : V  K  C  I  L  C  S  *  T  F  Q  E  A  G  *  T  F  S  Y  Y  L  *  C  C  *  S  E  :  E  S  S  E  G  W  K  S  R  T  S  L  M  E  E  K  R  I  C  W  I  W  T  K  S  A  E  S  C  S  N   : Y  F  W  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0100O21.2" strand="+"/>
                <serials PGL_serial="14" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="65451" stop="65546"/>
                    <exon start="65626" stop="65705"/>
                    <exon start="65913" stop="66006"/>
                    <exon start="66135" stop="66143"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>279</number_coding_nucleotides>
                  <number_encoded_amino_acids>93</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NCCARMGGSLQFHFFSCNILLKGINSTGLSDKLNVSSALKHSKKQGELSLTISDAADQKKVQKAGKVEHHLWKKRESAGSGQKALNLVRIISG</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="64548" e_stop="64598"/>
            <exon e_start="65187" e_stop="65304"/>
            <exon e_start="65439" e_stop="65546"/>
            <exon e_start="65626" e_stop="65705"/>
            <exon e_start="65913" e_stop="65923"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.983" acc_prob="0.981" e_score="0.980"/>
          <exon-intron don_prob="0.894" acc_prob="0.000" e_score="0.924"/>
          <exon-intron don_prob="0.690" acc_prob="0.857" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="0.975"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.980">
            <gDNA_exon_boundary e_start="64548" e_stop="64598" e_length="51"/>
          </exon>
          <intron i_serial="1" don_prob="0.983" acc_prob="0.981">
            <gDNA_intron_boundary i_start="64599" i_stop="65186" i_length="588"/>
          </intron>
          <exon e_serial="2" e_score="0.924">
            <gDNA_exon_boundary e_start="65187" e_stop="65304" e_length="118"/>
          </exon>
          <intron i_serial="2" don_prob="0.894" acc_prob="0.000">
            <gDNA_intron_boundary i_start="65305" i_stop="65438" i_length="134"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="65439" e_stop="65546" e_length="108"/>
          </exon>
          <intron i_serial="3" don_prob="0.690" acc_prob="0.857">
            <gDNA_intron_boundary i_start="65547" i_stop="65625" i_length="79"/>
          </intron>
          <exon e_serial="4" e_score="0.975">
            <gDNA_exon_boundary e_start="65626" e_stop="65705" e_length="80"/>
          </exon>
          <intron i_serial="4" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="65706" i_stop="65912" i_length="207"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="65913" e_stop="65923" e_length="11"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64548" stop="64598"/>
              <exon start="65187" stop="65304"/>
              <exon start="65439" stop="65546"/>
              <exon start="65626" stop="65705"/>
              <exon start="65913" stop="65923"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E273910" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTCTTTCTCCGGCCAACTTATTCCGAGCAGTTTCTACTGAGAAATGGAATT : CTTCGAAACTTGGGATAATAGGCCCGTCTTTTGACCCTTATCTGCTTAAATACAAGGTTTGGCTCCACAACCAAGTTATTCAGCTATCCCTAATTATCCATCATTCTCGCTGAAACTG : AATTTATTTTAGAACTGCTGTGCTAGAATGGGAGGTTCTCTACAATTTCACTTCTTCAGTTGCAACATTTTGCTAAAGGGAATAAACTCAACCGGGTTATCGGATAAG : TTAAATGTATCCTCTGCTCTTAAACATTCCAAGAAGCAGGGTGAACTTTCTCTTACTATCTCTGATGCTGCTGATCAGAA : GAAAGTTCAGA</gDNA_template>
            <first_frame> F  F  L  R  P  T  Y  S  E  Q  F  L  L  R  N  G  I  :  L  R  N  L  G  *  *  A  R  L  L  T  L  I  C  L  N  T  R  F  G  S  T  T  K  L  F  S  Y  P  *  L  S  I  I  L  A  E  T   : E  F  I  L  E  L  L  C  *  N  G  R  F  S  T  I  S  L  L  Q  L  Q  H  F  A  K  G  N  K  L  N  R  V  I  G  *   : V  K  C  I  L  C  S  *  T  F  Q  E  A  G  *  T  F  S  Y  Y  L  *  C  C  *  S  E  :  E  S  S   </first_frame>
            <second_frame>  S  F  S  G  Q  L  I  P  S  S  F  Y  *  E  M  E  F :   F  E  T  W  D  N  R  P  V  F  *  P  L  S  A  *  I  Q  G  L  A  P  Q  P  S  Y  S  A  I  P  N  Y  P  S  F  S  L  K  L  :  N  L  F  *  N  C  C  A  R  M  G  G  S  L  Q  F  H  F  F  S  C  N  I  L  L  K  G  I  N  S  T  G  L  S  D  K  :  L  N  V  S  S  A  L  K  H  S  K  K  Q  G  E  L  S  L  T  I  S  D  A  A  D  Q  K :   K  V  Q  </second_frame>
            <third_frame>   L  S  P  A  N  L  F  R  A  V  S  T  E  K  W  N   : S  S  K  L  G  I  I  G  P  S  F  D  P  Y  L  L  K  Y  K  V  W  L  H  N  Q  V  I  Q  L  S  L  I  I  H  H  S  R  *  N  * :   I  Y  F  R  T  A  V  L  E  W  E  V  L  Y  N  F  T  S  S  V  A  T  F  C  *  R  E  *  T  Q  P  G  Y  R  I  S :   *  M  Y  P  L  L  L  N  I  P  R  S  R  V  N  F  L  L  L  S  L  M  L  L  I  R   : R  K  F  R </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLm0100O21.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="+" PGL_start="67596" PGL_stop="67990"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="67596" e_stop="67990"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.901"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.901">
            <gDNA_exon_boundary e_start="67596" e_stop="67990" e_length="395"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67596" stop="67990"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E614284" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGAAGAGTAGTATGTACTTGGTTGATATTATACATTCTGGAAAATACTTGTCAGATAAAATCCAAGTTGCTATAGGTGTGTTGATATATCCCCGGTGAGATTGTGTATTGAATACAAAGACTCTACTTGGCTGATGATACAAGATATAACTAGAAGTCCACAAGGTTGATGAAAGTGTAACCTCATCGCAGTTGATTTCTTGTGTGTAAGCAAGACTACCAAACCATACTACACCTTATAGTGAGATTTTCCACGTTATACTGATATCATTGGGTTTTCAGTACAAAGGTTGGTTTTAGTTTTGTTTGTCTTAACATGTTTGTATCTAAATTTCTTGTACAGAGATGTTCCATTCAACTATTAATGGTTTATAAAGTATTCATGTAATCAATCAA</gDNA_template>
            <first_frame> G  R  V  V  C  T  W  L  I  L  Y  I  L  E  N  T  C  Q  I  K  S  K  L  L  *  V  C  *  Y  I  P  G  E  I  V  Y  *  I  Q  R  L  Y  L  A  D  D  T  R  Y  N  *  K  S  T  R  L  M  K  V  *  P  H  R  S  *  F  L  V  C  K  Q  D  Y  Q  T  I  L  H  L  I  V  R  F  S  T  L  Y  *  Y  H  W  V  F  S  T  K  V  G  F  S  F  V  C  L  N  M  F  V  S  K  F  L  V  Q  R  C  S  I  Q  L  L  M  V  Y  K  V  F  M  *  S  I   </first_frame>
            <second_frame>  E  E  *  Y  V  L  G  *  Y  Y  T  F  W  K  I  L  V  R  *  N  P  S  C  Y  R  C  V  D  I  S  P  V  R  L  C  I  E  Y  K  D  S  T  W  L  M  I  Q  D  I  T  R  S  P  Q  G  *  *  K  C  N  L  I  A  V  D  F  L  C  V  S  K  T  T  K  P  Y  Y  T  L  *  *  D  F  P  R  Y  T  D  I  I  G  F  S  V  Q  R  L  V  L  V  L  F  V  L  T  C  L  Y  L  N  F  L  Y  R  D  V  P  F  N  Y  *  W  F  I  K  Y  S  C  N  Q  S  </second_frame>
            <third_frame>   K  S  S  M  Y  L  V  D  I  I  H  S  G  K  Y  L  S  D  K  I  Q  V  A  I  G  V  L  I  Y  P  R  *  D  C  V  L  N  T  K  T  L  L  G  *  *  Y  K  I  *  L  E  V  H  K  V  D  E  S  V  T  S  S  Q  L  I  S  C  V  *  A  R  L  P  N  H  T  T  P  Y  S  E  I  F  H  V  I  L  I  S  L  G  F  Q  Y  K  G  W  F  *  F  C  L  S  *  H  V  C  I  *  I  S  C  T  E  M  F  H  S  T  I  N  G  L  *  S  I  H  V  I  N  Q </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLm0100O21.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="+" PGL_start="68132" PGL_stop="68348"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="68132" e_stop="68348"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.963"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.963">
            <gDNA_exon_boundary e_start="68132" e_stop="68348" e_length="217"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68132" stop="68348"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E422648" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTGATTTATTCTCTAGCGAGATATCTTTGCTTCAGATGTAACTAAAGTAAAGTTATGTGCACCAATTGAGGGAACACAGAGCACTATATATCCCTATACTGCTATGGGTTTTTGAGTACTTATGCCAATTTTACAGCAATTGGACTCCTAACATTATGGATTCCATCATTCCAGGAATACCATCCAAACACATACTGATCTTTCGGAATTCTATGCA</gDNA_template>
            <first_frame> L  I  Y  S  L  A  R  Y  L  C  F  R  C  N  *  S  K  V  M  C  T  N  *  G  N  T  E  H  Y  I  S  L  Y  C  Y  G  F  L  S  T  Y  A  N  F  T  A  I  G  L  L  T  L  W  I  P  S  F  Q  E  Y  H  P  N  T  Y  *  S  F  G  I  L  C  </first_frame>
            <second_frame>  *  F  I  L  *  R  D  I  F  A  S  D  V  T  K  V  K  L  C  A  P  I  E  G  T  Q  S  T  I  Y  P  Y  T  A  M  G  F  *  V  L  M  P  I  L  Q  Q  L  D  S  *  H  Y  G  F  H  H  S  R  N  T  I  Q  T  H  T  D  L  S  E  F  Y  A </second_frame>
            <third_frame>   D  L  F  S  S  E  I  S  L  L  Q  M  *  L  K  *  S  Y  V  H  Q  L  R  E  H  R  A  L  Y  I  P  I  L  L  W  V  F  E  Y  L  C  Q  F  Y  S  N  W  T  P  N  I  M  D  S  I  I  P  G  I  P  S  K  H  I  L  I  F  R  N  S  M   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLm0100O21.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="-" PGL_start="69294" PGL_stop="68202"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="69294" e_stop="69204"/>
            <exon e_start="69103" e_stop="68890"/>
            <exon e_start="68786" e_stop="68202"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.998" e_score="0.989"/>
          <exon-intron don_prob="0.976" acc_prob="0.997" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.989">
            <gDNA_exon_boundary e_start="69294" e_stop="69204" e_length="91"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.998">
            <gDNA_intron_boundary i_start="69203" i_stop="69104" i_length="100"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="69103" e_stop="68890" e_length="214"/>
          </exon>
          <intron i_serial="2" don_prob="0.976" acc_prob="0.997">
            <gDNA_intron_boundary i_start="68889" i_stop="68787" i_length="103"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="68786" e_stop="68202" e_length="585"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69294" stop="69204"/>
              <exon start="69103" stop="68890"/>
              <exon start="68786" stop="68202"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E741001" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGCTAAAACAGTTTTGCATGCTAAACCAGCACCTTACATGGCTTCATTCACTAGTAGAGGTCCAAGTGCAGTTGCACCGGATATCCTCAAG : CCGGATATCACGGCACCAGGGCTGAATATATTGGCAGCATGGAGTGGAGGATCATCCCCTACGAAGCTAGATATTGACAAACGTGTAGTAGAGTATAACATACTCTCAGGTACTTCCATGTCTTGCCCTCATGTTGGTGGCGCCGCAGCACTTTTGAAGGCTATACATCCCACTTGGAGCAGTGCTGCAATAAGATCTGCTCTGATAACTTCAG : CTGAATTACAAAATAATGTCGGTGAGCAAATAACTGATGCATCTGGGAAGCCAGCAGATCCATTCCAGTTCGGAGGAGGGCATTTCAGGCCATCAAAGGCAGCAGATCCTGGACTTGTCTACGATGCTTCCTACCAAGACTATCTTCTCTTCCTTTGTGCCTCTGGTGTTAAGCATCTTGACAAATCCTTCAAGTGTCCTAAGAAATCACATTCTCCTAGAGACCTAAATTACCCGTCTCTGGCTATTCCAAATCTCAATGGCACTGTGACTGCTAGAAGAAGATTGACAAATGTTGGTGCACCAAAGAGCGTTTACTTTGCCAGTGTCAAACCTCCATTGGGATTCTCTATTGAGATTTCACCACCCATCTTGTCTTTTAACCACGTTGGCTCCAAGAAAACGTTCACTATCACAGTGAAAGCTCACCGTGACATGATGCATAGAATTCCGAAAGATCAGTATGTGTTTGGATGGTATTCCTGGAATGATGGAATCCATAATGTTAGGAGTCCAATTGCTGTAAAATTGGCATAAGTACTCAAAAACCCATAGCAGTATAGGGATATATAGTGCTCTGTGTTCC</gDNA_template>
            <first_frame> S  *  N  S  F  A  C  *  T  S  T  L  H  G  F  I  H  *  *  R  S  K  C  S  C  T  G  Y  P  Q   : A  G  Y  H  G  T  R  A  E  Y  I  G  S  M  E  W  R  I  I  P  Y  E  A  R  Y  *  Q  T  C  S  R  V  *  H  T  L  R  Y  F  H  V  L  P  S  C  W  W  R  R  S  T  F  E  G  Y  T  S  H  L  E  Q  C  C  N  K  I  C  S  D  N  F  S :   *  I  T  K  *  C  R  *  A  N  N  *  C  I  W  E  A  S  R  S  I  P  V  R  R  R  A  F  Q  A  I  K  G  S  R  S  W  T  C  L  R  C  F  L  P  R  L  S  S  L  P  L  C  L  W  C  *  A  S  *  Q  I  L  Q  V  S  *  E  I  T  F  S  *  R  P  K  L  P  V  S  G  Y  S  K  S  Q  W  H  C  D  C  *  K  K  I  D  K  C  W  C  T  K  E  R  L  L  C  Q  C  Q  T  S  I  G  I  L  Y  *  D  F  T  T  H  L  V  F  *  P  R  W  L  Q  E  N  V  H  Y  H  S  E  S  S  P  *  H  D  A  *  N  S  E  R  S  V  C  V  W  M  V  F  L  E  *  W  N  P  *  C  *  E  S  N  C  C  K  I  G  I  S  T  Q  K  P  I  A  V  *  G  Y  I  V  L  C  V   </first_frame>
            <second_frame>  A  K  T  V  L  H  A  K  P  A  P  Y  M  A  S  F  T  S  R  G  P  S  A  V  A  P  D  I  L  K  :  P  D  I  T  A  P  G  L  N  I  L  A  A  W  S  G  G  S  S  P  T  K  L  D  I  D  K  R  V  V  E  Y  N  I  L  S  G  T  S  M  S  C  P  H  V  G  G  A  A  A  L  L  K  A  I  H  P  T  W  S  S  A  A  I  R  S  A  L  I  T  S   : A  E  L  Q  N  N  V  G  E  Q  I  T  D  A  S  G  K  P  A  D  P  F  Q  F  G  G  G  H  F  R  P  S  K  A  A  D  P  G  L  V  Y  D  A  S  Y  Q  D  Y  L  L  F  L  C  A  S  G  V  K  H  L  D  K  S  F  K  C  P  K  K  S  H  S  P  R  D  L  N  Y  P  S  L  A  I  P  N  L  N  G  T  V  T  A  R  R  R  L  T  N  V  G  A  P  K  S  V  Y  F  A  S  V  K  P  P  L  G  F  S  I  E  I  S  P  P  I  L  S  F  N  H  V  G  S  K  K  T  F  T  I  T  V  K  A  H  R  D  M  M  H  R  I  P  K  D  Q  Y  V  F  G  W  Y  S  W  N  D  G  I  H  N  V  R  S  P  I  A  V  K  L  A  *  V  L  K  N  P  *  Q  Y  R  D  I  *  C  S  V  F  </second_frame>
            <third_frame>   L  K  Q  F  C  M  L  N  Q  H  L  T  W  L  H  S  L  V  E  V  Q  V  Q  L  H  R  I  S  S  S :   R  I  S  R  H  Q  G  *  I  Y  W  Q  H  G  V  E  D  H  P  L  R  S  *  I  L  T  N  V  *  *  S  I  T  Y  S  Q  V  L  P  C  L  A  L  M  L  V  A  P  Q  H  F  *  R  L  Y  I  P  L  G  A  V  L  Q  *  D  L  L  *  *  L  Q  :  L  N  Y  K  I  M  S  V  S  K  *  L  M  H  L  G  S  Q  Q  I  H  S  S  S  E  E  G  I  S  G  H  Q  R  Q  Q  I  L  D  L  S  T  M  L  P  T  K  T  I  F  S  S  F  V  P  L  V  L  S  I  L  T  N  P  S  S  V  L  R  N  H  I  L  L  E  T  *  I  T  R  L  W  L  F  Q  I  S  M  A  L  *  L  L  E  E  D  *  Q  M  L  V  H  Q  R  A  F  T  L  P  V  S  N  L  H  W  D  S  L  L  R  F  H  H  P  S  C  L  L  T  T  L  A  P  R  K  R  S  L  S  Q  *  K  L  T  V  T  *  C  I  E  F  R  K  I  S  M  C  L  D  G  I  P  G  M  M  E  S  I  M  L  G  V  Q  L  L  *  N  W  H  K  Y  S  K  T  H  S  S  I  G  I  Y  S  A  L  C  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0100O21.2" strand="-"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="69293" stop="69204"/>
                    <exon start="69103" stop="68890"/>
                    <exon start="68786" stop="68251"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>837</number_coding_nucleotides>
                  <number_encoded_amino_acids>279</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AKTVLHAKPAPYMASFTSRGPSAVAPDILKPDITAPGLNILAAWSGGSSPTKLDIDKRVVEYNILSGTSMSCPHVGGAAALLKAIHPTWSSAAIRSALITSAELQNNVGEQITDASGKPADPFQFGGGHFRPSKAADPGLVYDASYQDYLLFLCASGVKHLDKSFKCPKKSHSPRDLNYPSLAIPNLNGTVTARRRLTNVGAPKSVYFASVKPPLGFSIEISPPILSFNHVGSKKTFTITVKAHRDMMHRIPKDQYVFGWYSWNDGIHNVRSPIAVKLA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="18" PGL_strand="+" PGL_start="68365" PGL_stop="69979"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="68365" e_stop="69167"/>
            <exon e_start="69914" e_stop="69979"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.955" acc_prob="0.582" e_score="1.000"/>
          <exon-only e_score="0.985"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="68365" e_stop="69167" e_length="803"/>
          </exon>
          <intron i_serial="1" don_prob="0.955" acc_prob="0.582">
            <gDNA_intron_boundary i_start="69168" i_stop="69913" i_length="746"/>
          </intron>
          <exon e_serial="2" e_score="0.985">
            <gDNA_exon_boundary e_start="69914" e_stop="69979" e_length="66"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68365" stop="69167"/>
              <exon start="69914" stop="69979"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E689297" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68366" stop="69070"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E328999" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68366" stop="68815"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E326229" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTCACTGTGATAGTGAACGTTTTCTTGGAGCCAACGTGGTTAAAAGACAAGATGGGTGGTGAAATCTCAATAGAGAATCCCAATGGAGGTTTGACACTGGCAAAGTAAACGCTCTTTGGTGCACCAACATTTGTCAATCTTCTTCTAGCAGTCACAGTGCCATTGAGATTTGGAATAGCCAGAGACGGGTAATTTAGGTCTCTAGGAGAATGTGATTTCTTAGGACACTTGAAGGATTTGTCAAGATGCTTAACACCAGAGGCACAAAGGAAGAGAAGATAGTCTTGGTAGGAAGCATCGTAGACAAGTCCAGGATCTGCTGCCTTTGATGGCCTGAAATGCCCTCCTCCGAACTGGAATGGATCTGCTGGCTTCCCAGATGCATCAGTTATTTGCTCACCGACATTATTTTGTAATTCAGCTGAAATTATACATTGATTAAATCAGTATAGTGTGGAAACTTATAGACAAAAGAAGAGTTCAACTTCTAGCCCCTGACAAATTTCAGGGGCAGTTAAAGGTACCTGAAGTTATCAGAGCAGATCTTATTGCAGCACTGCTCCAAGTGGGATGTATAGCCTTCAAAAGTGCTGCGGCGCCACCAACATGAGGGCAAGACATGGAAGTACCTGAGAGTATGTTATACTCTACTACACGTTTGTCAATATCTAGCTTCGTAGGGGATGATCCTCCACTCCATGCTGCCAATATATTCAGCCCTGGTGCCGTGATATCCGGCTGTGGGAAGAGCACAAAATGAGAATTTTGTTTAGAAGACAATGCATAATATATCACAAATCAG : TACAATTGGTGACAAAAATTTCCTGTCAACACTGCTAGCACCAACAGTGATAATCCAAGGAGCTGT</gDNA_template>
            <first_frame> F  H  C  D  S  E  R  F  L  G  A  N  V  V  K  R  Q  D  G  W  *  N  L  N  R  E  S  Q  W  R  F  D  T  G  K  V  N  A  L  W  C  T  N  I  C  Q  S  S  S  S  S  H  S  A  I  E  I  W  N  S  Q  R  R  V  I  *  V  S  R  R  M  *  F  L  R  T  L  E  G  F  V  K  M  L  N  T  R  G  T  K  E  E  K  I  V  L  V  G  S  I  V  D  K  S  R  I  C  C  L  *  W  P  E  M  P  S  S  E  L  E  W  I  C  W  L  P  R  C  I  S  Y  L  L  T  D  I  I  L  *  F  S  *  N  Y  T  L  I  K  S  V  *  C  G  N  L  *  T  K  E  E  F  N  F  *  P  L  T  N  F  R  G  S  *  R  Y  L  K  L  S  E  Q  I  L  L  Q  H  C  S  K  W  D  V  *  P  S  K  V  L  R  R  H  Q  H  E  G  K  T  W  K  Y  L  R  V  C  Y  T  L  L  H  V  C  Q  Y  L  A  S  *  G  M  I  L  H  S  M  L  P  I  Y  S  A  L  V  P  *  Y  P  A  V  G  R  A  Q  N  E  N  F  V  *  K  T  M  H  N  I  S  Q  I  S :   T  I  G  D  K  N  F  L  S  T  L  L  A  P  T  V  I  I  Q  G  A   </first_frame>
            <second_frame>  F  T  V  I  V  N  V  F  L  E  P  T  W  L  K  D  K  M  G  G  E  I  S  I  E  N  P  N  G  G  L  T  L  A  K  *  T  L  F  G  A  P  T  F  V  N  L  L  L  A  V  T  V  P  L  R  F  G  I  A  R  D  G  *  F  R  S  L  G  E  C  D  F  L  G  H  L  K  D  L  S  R  C  L  T  P  E  A  Q  R  K  R  R  *  S  W  *  E  A  S  *  T  S  P  G  S  A  A  F  D  G  L  K  C  P  P  P  N  W  N  G  S  A  G  F  P  D  A  S  V  I  C  S  P  T  L  F  C  N  S  A  E  I  I  H  *  L  N  Q  Y  S  V  E  T  Y  R  Q  K  K  S  S  T  S  S  P  *  Q  I  S  G  A  V  K  G  T  *  S  Y  Q  S  R  S  Y  C  S  T  A  P  S  G  M  Y  S  L  Q  K  C  C  G  A  T  N  M  R  A  R  H  G  S  T  *  E  Y  V  I  L  Y  Y  T  F  V  N  I  *  L  R  R  G  *  S  S  T  P  C  C  Q  Y  I  Q  P  W  C  R  D  I  R  L  W  E  E  H  K  M  R  I  L  F  R  R  Q  C  I  I  Y  H  K  S   : V  Q  L  V  T  K  I  S  C  Q  H  C  *  H  Q  Q  *  *  S  K  E  L  </second_frame>
            <third_frame>   S  L  *  *  *  T  F  S  W  S  Q  R  G  *  K  T  R  W  V  V  K  S  Q  *  R  I  P  M  E  V  *  H  W  Q  S  K  R  S  L  V  H  Q  H  L  S  I  F  F  *  Q  S  Q  C  H  *  D  L  E  *  P  E  T  G  N  L  G  L  *  E  N  V  I  S  *  D  T  *  R  I  C  Q  D  A  *  H  Q  R  H  K  G  R  E  D  S  L  G  R  K  H  R  R  Q  V  Q  D  L  L  P  L  M  A  *  N  A  L  L  R  T  G  M  D  L  L  A  S  Q  M  H  Q  L  F  A  H  R  H  Y  F  V  I  Q  L  K  L  Y  I  D  *  I  S  I  V  W  K  L  I  D  K  R  R  V  Q  L  L  A  P  D  K  F  Q  G  Q  L  K  V  P  E  V  I  R  A  D  L  I  A  A  L  L  Q  V  G  C  I  A  F  K  S  A  A  A  P  P  T  *  G  Q  D  M  E  V  P  E  S  M  L  Y  S  T  T  R  L  S  I  S  S  F  V  G  D  D  P  P  L  H  A  A  N  I  F  S  P  G  A  V  I  S  G  C  G  K  S  T  K  *  E  F  C  L  E  D  N  A  *  Y  I  T  N  Q  :  Y  N  W  *  Q  K  F  P  V  N  T  A  S  T  N  S  D  N  P  R  S  C </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLm0100O21.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="19" PGL_strand="-" PGL_start="73551" PGL_stop="72275"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="73551" e_stop="73457"/>
            <exon e_start="73356" e_stop="73164"/>
            <exon e_start="73025" e_stop="72846"/>
            <exon e_start="72379" e_stop="72275"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="0.947"/>
          <exon-intron don_prob="0.974" acc_prob="0.938" e_score="0.964"/>
          <exon-intron don_prob="0.950" acc_prob="0.974" e_score="0.956"/>
          <exon-only e_score="0.971"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.947">
            <gDNA_exon_boundary e_start="73551" e_stop="73457" e_length="95"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="73456" i_stop="73357" i_length="100"/>
          </intron>
          <exon e_serial="2" e_score="0.964">
            <gDNA_exon_boundary e_start="73356" e_stop="73164" e_length="193"/>
          </exon>
          <intron i_serial="2" don_prob="0.974" acc_prob="0.938">
            <gDNA_intron_boundary i_start="73163" i_stop="73026" i_length="138"/>
          </intron>
          <exon e_serial="3" e_score="0.956">
            <gDNA_exon_boundary e_start="73025" e_stop="72846" e_length="180"/>
          </exon>
          <intron i_serial="3" don_prob="0.950" acc_prob="0.974">
            <gDNA_intron_boundary i_start="72845" i_stop="72380" i_length="466"/>
          </intron>
          <exon e_serial="4" e_score="0.971">
            <gDNA_exon_boundary e_start="72379" e_stop="72275" e_length="105"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73551" stop="73457"/>
              <exon start="73356" stop="73164"/>
              <exon start="73025" stop="72846"/>
              <exon start="72379" stop="72275"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E448730" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATTGTATTTTTGTTAAAAATATGAATTCATTTTCCACACTCTCATTTCTTCTTCTCCTTGTGCTTCCTCTCTTGGCTTCATGTCATGAAAAACAG : GTTTATATAGTGTATTTTGGAGGGCATAATGGGGAGAAAGCATTGCATGAGATTGAAGAAAACCATCACTCATATTTATTATCAGTAAAAGATAATGAAGAAGAAGCCAAATCTTCTCTCATTTATAGTTATAAACACAGCATCAATGGATTTGCCGCACTTCTCACCCCTCATCAAGCTTTTAAATTATCTG : AGTTGGAAGAAGTGGTATCGGTGTATAAAAGTGAGCCAAGAAAATATAGTTTGCATACAACAAGGTCATGGGAATTTTCTGGAGTGGAAGAGTCAGTAGCACCAAATTATTTGAACAAAGATGACTTGCTATTGAAAGCCAGATATGGAAAAAATATCATTATTGGAGTTCTTGATAGCG : GGCTATGGCCAGAATCTAAGAGCTTTAGTGATGAAGGGATTGGACCAATACCAAAGTCATGGAAAGGAATCTGCCAATCTGGAGATGCTTTCAACTCTTCAAACT</gDNA_template>
            <first_frame> I  V  F  L  L  K  I  *  I  H  F  P  H  S  H  F  F  F  S  L  C  F  L  S  W  L  H  V  M  K  N  R :   F  I  *  C  I  L  E  G  I  M  G  R  K  H  C  M  R  L  K  K  T  I  T  H  I  Y  Y  Q  *  K  I  M  K  K  K  P  N  L  L  S  F  I  V  I  N  T  A  S  M  D  L  P  H  F  S  P  L  I  K  L  L  N  Y  L  :  S  W  K  K  W  Y  R  C  I  K  V  S  Q  E  N  I  V  C  I  Q  Q  G  H  G  N  F  L  E  W  K  S  Q  *  H  Q  I  I  *  T  K  M  T  C  Y  *  K  P  D  M  E  K  I  S  L  L  E  F  L  I  A  :  G  Y  G  Q  N  L  R  A  L  V  M  K  G  L  D  Q  Y  Q  S  H  G  K  E  S  A  N  L  E  M  L  S  T  L  Q  T </first_frame>
            <second_frame>  L  Y  F  C  *  K  Y  E  F  I  F  H  T  L  I  S  S  S  P  C  A  S  S  L  G  F  M  S  *  K  T   : G  L  Y  S  V  F  W  R  A  *  W  G  E  S  I  A  *  D  *  R  K  P  S  L  I  F  I  I  S  K  R  *  *  R  R  S  Q  I  F  S  H  L  *  L  *  T  Q  H  Q  W  I  C  R  T  S  H  P  S  S  S  F  *  I  I  * :   V  G  R  S  G  I  G  V  *  K  *  A  K  K  I  *  F  A  Y  N  K  V  M  G  I  F  W  S  G  R  V  S  S  T  K  L  F  E  Q  R  *  L  A  I  E  S  Q  I  W  K  K  Y  H  Y  W  S  S  *  *  R :   A  M  A  R  I  *  E  L  *  *  *  R  D  W  T  N  T  K  V  M  E  R  N  L  P  I  W  R  C  F  Q  L  F  K   </second_frame>
            <third_frame>   C  I  F  V  K  N  M  N  S  F  S  T  L  S  F  L  L  L  L  V  L  P  L  L  A  S  C  H  E  K  Q  :  V  Y  I  V  Y  F  G  G  H  N  G  E  K  A  L  H  E  I  E  E  N  H  H  S  Y  L  L  S  V  K  D  N  E  E  E  A  K  S  S  L  I  Y  S  Y  K  H  S  I  N  G  F  A  A  L  L  T  P  H  Q  A  F  K  L  S   : E  L  E  E  V  V  S  V  Y  K  S  E  P  R  K  Y  S  L  H  T  T  R  S  W  E  F  S  G  V  E  E  S  V  A  P  N  Y  L  N  K  D  D  L  L  L  K  A  R  Y  G  K  N  I  I  I  G  V  L  D  S   : G  L  W  P  E  S  K  S  F  S  D  E  G  I  G  P  I  P  K  S  W  K  G  I  C  Q  S  G  D  A  F  N  S  S  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0100O21.2" strand="-"/>
                <serials PGL_serial="19" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="73549" stop="73457"/>
                    <exon start="73356" stop="73164"/>
                    <exon start="73025" stop="72846"/>
                    <exon start="72379" stop="72276"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>570</number_coding_nucleotides>
                  <number_encoded_amino_acids>190</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CIFVKNMNSFSTLSFLLLLVLPLLASCHEKQVYIVYFGGHNGEKALHEIEENHHSYLLSVKDNEEEAKSSLIYSYKHSINGFAALLTPHQAFKLSELEEVVSVYKSEPRKYSLHTTRSWEFSGVEESVAPNYLNKDDLLLKARYGKNIIIGVLDSGLWPESKSFSDEGIGPIPKSWKGICQSGDAFNSSN</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="20" PGL_strand="+" PGL_start="92151" PGL_stop="92357"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="92151" e_stop="92357"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.913"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.913">
            <gDNA_exon_boundary e_start="92151" e_stop="92357" e_length="207"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92151" stop="92357"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E283948" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="20" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAAACCATTTTGAGAGCAATGTGAGGTATTCCATAGACTATACCAGAAAATAGTCTGTGAAGAAAAATAGAGTGTGAGCGATATTTTAGTAAGACGGAAACCAAAAGAGTGTTGTTCTTTTTGAGTGTGTAGTAGTCACTTTGAGTATTGTATTCGTGACTACACAGTGTAAAATTCCTTACTATAGTAATATCAATTGCTCCTCT</gDNA_template>
            <first_frame> K  N  H  F  E  S  N  V  R  Y  S  I  D  Y  T  R  K  *  S  V  K  K  N  R  V  *  A  I  F  *  *  D  G  N  Q  K  S  V  V  L  F  E  C  V  V  V  T  L  S  I  V  F  V  T  T  Q  C  K  I  P  Y  Y  S  N  I  N  C  S  S </first_frame>
            <second_frame>  K  T  I  L  R  A  M  *  G  I  P  *  T  I  P  E  N  S  L  *  R  K  I  E  C  E  R  Y  F  S  K  T  E  T  K  R  V  L  F  F  L  S  V  *  *  S  L  *  V  L  Y  S  *  L  H  S  V  K  F  L  T  I  V  I  S  I  A  P   </second_frame>
            <third_frame>   K  P  F  *  E  Q  C  E  V  F  H  R  L  Y  Q  K  I  V  C  E  E  K  *  S  V  S  D  I  L  V  R  R  K  P  K  E  C  C  S  F  *  V  C  S  S  H  F  E  Y  C  I  R  D  Y  T  V  *  N  S  L  L  *  *  Y  Q  L  L  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLm0100O21.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="21" PGL_strand="+" PGL_start="98333" PGL_stop="101075"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="98333" e_stop="98911"/>
            <exon e_start="100550" e_stop="101075"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="98333" e_stop="98911" e_length="579"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="1.000">
            <gDNA_intron_boundary i_start="98912" i_stop="100549" i_length="1638"/>
          </intron>
          <exon e_serial="2" e_score="0.992">
            <gDNA_exon_boundary e_start="100550" e_stop="101075" e_length="526"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98333" stop="98911"/>
              <exon start="100550" stop="100830"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E726360" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98338" stop="98911"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E729319" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98376" stop="98911"/>
              <exon start="100550" stop="100694"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E348049" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98387" stop="98892"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E464063" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98391" stop="98911"/>
              <exon start="100550" stop="100672"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E375954" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98391" stop="98890"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319536" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98391" stop="98877"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319443" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98391" stop="98811"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319345" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98393" stop="98911"/>
              <exon start="100550" stop="100913"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E709033" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98773" stop="98911"/>
              <exon start="100550" stop="101075"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E375953" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="21" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGAAACTCAAACGTCTACTTGATTTCCTTTTTTGGTCCGGCTAACATCTCGACAGTTCTCAACCGGCCGGCTAGTCGGCGACCGTCGTTACCGGCGATGCGGAGAACCGACGTGACTCCCTCAATCTTTCTTCTCTTACTCTTCTTCCTTCTTCTCTCTAAGCCATCACCTTGTTCCTCCTTTTCTTTCCCATTTTCCAACTACCAAGCCGTCTTCTCTCTTTCTCACTCGCTATTCTCCCGCGTCGCTAATCTCCGGCAAGCTCGCGGAGACTATGATGGCGCTGCCCGAGCTCGATCCATTGCTAAAAAACTAGAGAATGGTATGGGTATTGGTTTCTGGAAAGTCATGTGGAACGTGGGTTGGGATTATGCTCGAAATTATGCTTGGAGAGATGCTACGTCATTTGAAATATTCGGTGCTTTCTCTGATCTGAATGAAATTCTGCGTGGTCTTAGCGACTTTTCAAGTGTCAGTTCAGATAGGGAAAGGGTTAACTGGATGAATCGAAATTATGAAAATCTTTTCAGAGTTTCGAAATCTCTCTTCGGTAAATTTCGGAAGGTGTTTCGACAACCA : GGTCCGCTGAAGGAAGTCATGGAGACACTTCAGAAGGAAGTATTAGAAGGTGATTTGCTTAAGGACTGCCTTGAATTGGGTTCTACTGATTTGAAGGGCCTGCTCACAGTTTTGAAGGATATTTCTTCAAAATATACCTCTACTTTCTCAACGCGAGCAGATCTGTGACTGAGTGAAGTTGAAACCAAGGTATTATGGTTAACTCTGTAACAAGTTTTGTTGCTCTACAGTACAGTACTAACAGAGGTGTAAAAGCTCAATGTAGAAGAAGCTGAATTTTTTGTTTCCAGGCTTGTGTACTTTAAGTGACTTGTTGATCAACGGTCTAAAAATGGACAAGCCTATTAATTAGTTTGACTTTGGAAGGTTATAAACATGTATACCTAGCATGTGCTTTATCATAATGAGAGTTTTTTTTTTTTAATGTTGGATCTTGGGTGTACTCTTATTTTGACATTTTTCATGGTTGAAAAATTATTTATTATAAAGACAATGCATTTATTAAGTTATTAACGCCATGAAAGGA</gDNA_template>
            <first_frame> G  N  S  N  V  Y  L  I  S  F  F  G  P  A  N  I  S  T  V  L  N  R  P  A  S  R  R  P  S  L  P  A  M  R  R  T  D  V  T  P  S  I  F  L  L  L  L  F  F  L  L  L  S  K  P  S  P  C  S  S  F  S  F  P  F  S  N  Y  Q  A  V  F  S  L  S  H  S  L  F  S  R  V  A  N  L  R  Q  A  R  G  D  Y  D  G  A  A  R  A  R  S  I  A  K  K  L  E  N  G  M  G  I  G  F  W  K  V  M  W  N  V  G  W  D  Y  A  R  N  Y  A  W  R  D  A  T  S  F  E  I  F  G  A  F  S  D  L  N  E  I  L  R  G  L  S  D  F  S  S  V  S  S  D  R  E  R  V  N  W  M  N  R  N  Y  E  N  L  F  R  V  S  K  S  L  F  G  K  F  R  K  V  F  R  Q  P  :  G  P  L  K  E  V  M  E  T  L  Q  K  E  V  L  E  G  D  L  L  K  D  C  L  E  L  G  S  T  D  L  K  G  L  L  T  V  L  K  D  I  S  S  K  Y  T  S  T  F  S  T  R  A  D  L  *  L  S  E  V  E  T  K  V  L  W  L  T  L  *  Q  V  L  L  L  Y  S  T  V  L  T  E  V  *  K  L  N  V  E  E  A  E  F  F  V  S  R  L  V  Y  F  K  *  L  V  D  Q  R  S  K  N  G  Q  A  Y  *  L  V  *  L  W  K  V  I  N  M  Y  T  *  H  V  L  Y  H  N  E  S  F  F  F  L  M  L  D  L  G  C  T  L  I  L  T  F  F  M  V  E  K  L  F  I  I  K  T  M  H  L  L  S  Y  *  R  H  E  R  </first_frame>
            <second_frame>  E  T  Q  T  S  T  *  F  P  F  L  V  R  L  T  S  R  Q  F  S  T  G  R  L  V  G  D  R  R  Y  R  R  C  G  E  P  T  *  L  P  Q  S  F  F  S  Y  S  S  S  F  F  S  L  S  H  H  L  V  P  P  F  L  S  H  F  P  T  T  K  P  S  S  L  F  L  T  R  Y  S  P  A  S  L  I  S  G  K  L  A  E  T  M  M  A  L  P  E  L  D  P  L  L  K  N  *  R  M  V  W  V  L  V  S  G  K  S  C  G  T  W  V  G  I  M  L  E  I  M  L  G  E  M  L  R  H  L  K  Y  S  V  L  S  L  I  *  M  K  F  C  V  V  L  A  T  F  Q  V  S  V  Q  I  G  K  G  L  T  G  *  I  E  I  M  K  I  F  S  E  F  R  N  L  S  S  V  N  F  G  R  C  F  D  N  Q :   V  R  *  R  K  S  W  R  H  F  R  R  K  Y  *  K  V  I  C  L  R  T  A  L  N  W  V  L  L  I  *  R  A  C  S  Q  F  *  R  I  F  L  Q  N  I  P  L  L  S  Q  R  E  Q  I  C  D  *  V  K  L  K  P  R  Y  Y  G  *  L  C  N  K  F  C  C  S  T  V  Q  Y  *  Q  R  C  K  S  S  M  *  K  K  L  N  F  L  F  P  G  L  C  T  L  S  D  L  L  I  N  G  L  K  M  D  K  P  I  N  *  F  D  F  G  R  L  *  T  C  I  P  S  M  C  F  I  I  M  R  V  F  F  F  *  C  W  I  L  G  V  L  L  F  *  H  F  S  W  L  K  N  Y  L  L  *  R  Q  C  I  Y  *  V  I  N  A  M  K  G </second_frame>
            <third_frame>   K  L  K  R  L  L  D  F  L  F  W  S  G  *  H  L  D  S  S  Q  P  A  G  *  S  A  T  V  V  T  G  D  A  E  N  R  R  D  S  L  N  L  S  S  L  T  L  L  P  S  S  L  *  A  I  T  L  F  L  L  F  F  P  I  F  Q  L  P  S  R  L  L  S  F  S  L  A  I  L  P  R  R  *  S  P  A  S  S  R  R  L  *  W  R  C  P  S  S  I  H  C  *  K  T  R  E  W  Y  G  Y  W  F  L  E  S  H  V  E  R  G  L  G  L  C  S  K  L  C  L  E  R  C  Y  V  I  *  N  I  R  C  F  L  *  S  E  *  N  S  A  W  S  *  R  L  F  K  C  Q  F  R  *  G  K  G  *  L  D  E  S  K  L  *  K  S  F  Q  S  F  E  I  S  L  R  *  I  S  E  G  V  S  T  T   : R  S  A  E  G  S  H  G  D  T  S  E  G  S  I  R  R  *  F  A  *  G  L  P  *  I  G  F  Y  *  F  E  G  P  A  H  S  F  E  G  Y  F  F  K  I  Y  L  Y  F  L  N  A  S  R  S  V  T  E  *  S  *  N  Q  G  I  M  V  N  S  V  T  S  F  V  A  L  Q  Y  S  T  N  R  G  V  K  A  Q  C  R  R  S  *  I  F  C  F  Q  A  C  V  L  *  V  T  C  *  S  T  V  *  K  W  T  S  L  L  I  S  L  T  L  E  G  Y  K  H  V  Y  L  A  C  A  L  S  *  *  E  F  F  F  F  N  V  G  S  W  V  Y  S  Y  F  D  I  F  H  G  *  K  I  I  Y  Y  K  D  N  A  F  I  K  L  L  T  P  *  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0100O21.2" strand="+"/>
                <serials PGL_serial="21" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="98333" stop="98911"/>
                    <exon start="100550" stop="100717"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>744</number_coding_nucleotides>
                  <number_encoded_amino_acids>248</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GNSNVYLISFFGPANISTVLNRPASRRPSLPAMRRTDVTPSIFLLLLFFLLLSKPSPCSSFSFPFSNYQAVFSLSHSLFSRVANLRQARGDYDGAARARSIAKKLENGMGIGFWKVMWNVGWDYARNYAWRDATSFEIFGAFSDLNEILRGLSDFSSVSSDRERVNWMNRNYENLFRVSKSLFGKFRKVFRQPGPLKEVMETLQKEVLEGDLLKDCLELGSTDLKGLLTVLKDISSKYTSTFSTRADL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="22" PGL_strand="+" PGL_start="103084" PGL_stop="105601"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="103154" e_stop="103597"/>
            <exon e_start="104284" e_stop="104408"/>
            <exon e_start="104535" e_stop="104780"/>
            <exon e_start="104900" e_stop="105155"/>
            <exon e_start="105250" e_stop="105601"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.886" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.997" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="103154" e_stop="103597" e_length="444"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.995">
            <gDNA_intron_boundary i_start="103598" i_stop="104283" i_length="686"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="104284" e_stop="104408" e_length="125"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.990">
            <gDNA_intron_boundary i_start="104409" i_stop="104534" i_length="126"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="104535" e_stop="104780" e_length="246"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.886">
            <gDNA_intron_boundary i_start="104781" i_stop="104899" i_length="119"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="104900" e_stop="105155" e_length="256"/>
          </exon>
          <intron i_serial="4" don_prob="0.997" acc_prob="0.997">
            <gDNA_intron_boundary i_start="105156" i_stop="105249" i_length="94"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="105250" e_stop="105601" e_length="352"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103154" stop="103475"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E313458" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103272" stop="103597"/>
              <exon start="104284" stop="104408"/>
              <exon start="104535" stop="104780"/>
              <exon start="104900" stop="105155"/>
              <exon start="105250" stop="105589"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E745205" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103276" stop="103597"/>
              <exon start="104284" stop="104408"/>
              <exon start="104535" stop="104780"/>
              <exon start="104900" stop="104933"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E723532" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103280" stop="103597"/>
              <exon start="104284" stop="104408"/>
              <exon start="104535" stop="104681"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E347345" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103289" stop="103597"/>
              <exon start="104284" stop="104408"/>
              <exon start="104535" stop="104769"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E467535" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103290" stop="103597"/>
              <exon start="104284" stop="104408"/>
              <exon start="104535" stop="104749"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E347573" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103292" stop="103597"/>
              <exon start="104284" stop="104408"/>
              <exon start="104535" stop="104780"/>
              <exon start="104900" stop="104970"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343693" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103292" stop="103597"/>
              <exon start="104284" stop="104408"/>
              <exon start="104535" stop="104588"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E321845" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103292" stop="103597"/>
              <exon start="104284" stop="104408"/>
              <exon start="104535" stop="104548"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E358775" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103295" stop="103597"/>
              <exon start="104284" stop="104408"/>
              <exon start="104535" stop="104708"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E324184" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103295" stop="103597"/>
              <exon start="104284" stop="104408"/>
              <exon start="104535" stop="104650"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319862" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103295" stop="103547"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289904" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103299" stop="103597"/>
              <exon start="104284" stop="104408"/>
              <exon start="104535" stop="104653"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E567918" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103302" stop="103597"/>
              <exon start="104284" stop="104408"/>
              <exon start="104535" stop="104780"/>
              <exon start="104900" stop="104973"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339221" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103331" stop="103597"/>
              <exon start="104284" stop="104408"/>
              <exon start="104535" stop="104662"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265551" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103335" stop="103597"/>
              <exon start="104284" stop="104408"/>
              <exon start="104535" stop="104780"/>
              <exon start="104900" stop="104913"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E327240" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104401" stop="104408"/>
              <exon start="104535" stop="104780"/>
              <exon start="104900" stop="105155"/>
              <exon start="105250" stop="105447"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E332124" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104622" stop="104780"/>
              <exon start="104900" stop="105155"/>
              <exon start="105250" stop="105601"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E214301" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="105064" stop="105155"/>
              <exon start="105250" stop="105591"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E218545" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="105107" stop="105155"/>
              <exon start="105250" stop="105591"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E218953" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="22" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAACTTCTCATCAATGAATTGAAGTCTTCGTCACACTCTCTAAAATGACTAGCTCATTAACCTCAAAACACATAATATAGTATACTATATAATTAGACAATTGTTTGAAACTTTTCTTCAAGCTACTCAATTTTCCACTAGTATACTATACATTTTTTTTCTTCCCCCTTAGCTTCTTTTTGTTTGATGAAATGGGTGCTGGGGAAGTAAAGAGGAGATGGATAGTGGTGTATGTAGTGGTAGTTTTAGGATTGAATTTGGGGGTAAATGTAAATGCACAACAAGTGCCTTGTTATTTTATATTTGGTGATTCATTAGTGGATAATGGGAATAACAACAATATTCAGTCATTGGCTAGGGCTAATTACTTGCCTTATGGTATTGATTATCCTGATGGTCCAACTGGAAGGTTTTCCAATGGAAAAACAACTGTTGATGTCATTG : CTGAGCTTTTGGGGTTCGATGATTATATTCCACCCTATGCATCTGCAAGGGGTGAAGACATTCTCAAAGGTGTTAATTTTGCATCTGCTGCTGCTGGAATTAGAGAAGAAACTGGTCAACAATTG : GGAGCAAGGATTACGTTTGGTGGTCAGGTAAATAATTACAGGAACACAGTGCAACAAGTGGTGCAAATACTTGGAGATGAAAATTCTGCTGCTAATTATTTGAGCAAATGCATTTACTCAATTGGATTAGGCAGCAATGATTATCTCAATAATTATTTCATGCCTCAATATTACTCCACTAGCAGACAATTTAATCCTGATCAATATGCTGATGTTCTAATTCAACAATACTCTCAACAACTAAAG : ACTTTGTATGACTATGGAGCAAGGAAGTTTGTCTTAATTGGAGTGGGCCAAATTGGTTGTAGCCCAAATGCTCTAGCCCAAAACAGTCCTGATGGAAGAACCTGTGCAGAAAATATAAATAATGCAAACAAGTTGTTCAACAATAGGCTAAAGGGTATTGTGGATGAATTCAATGGCAATACACCAGATGCAAAATTCATCTACATCAATGCTTATGATATCTTCCAAGATTTAATTGACAATCCCTCAGCATTTG : GATTTAGAGTAACGAATGCTGGATGTTGTGGAGTAGGAAGGAATAACGGGCAAATAACATGTCTTCCACTACAAAATCCTTGCCAAAATAGAGATGAATATGTATTTTGGGATGCATTTCATCCAGGTGAAGCTGCAAATATAGTTGTTGGGAGAAGATCATATAGAGCTGAAAGATCATCAGATGCTTATCCTTTTGATATTCAGCGTTTAGCTCAACTATGAAGATAAGAGATGAAGCTAAAAATATATATATTTTTGTGGAATTTGTATTATTGTGTTCTATGATGTATTATGAGTTGATAATAATTAATTTTATTATTTGAGAAATGTTATGGTTACTATGACATGTG</gDNA_template>
            <first_frame> *  L  L  I  N  E  L  K  S  S  S  H  S  L  K  *  L  A  H  *  P  Q  N  T  *  Y  S  I  L  Y  N  *  T  I  V  *  N  F  S  S  S  Y  S  I  F  H  *  Y  T  I  H  F  F  S  S  P  L  A  S  F  C  L  M  K  W  V  L  G  K  *  R  G  D  G  *  W  C  M  *  W  *  F  *  D  *  I  W  G  *  M  *  M  H  N  K  C  L  V  I  L  Y  L  V  I  H  *  W  I  M  G  I  T  T  I  F  S  H  W  L  G  L  I  T  C  L  M  V  L  I  I  L  M  V  Q  L  E  G  F  P  M  E  K  Q  L  L  M  S  L  :  L  S  F  W  G  S  M  I  I  F  H  P  M  H  L  Q  G  V  K  T  F  S  K  V  L  I  L  H  L  L  L  L  E  L  E  K  K  L  V  N  N  W :   E  Q  G  L  R  L  V  V  R  *  I  I  T  G  T  Q  C  N  K  W  C  K  Y  L  E  M  K  I  L  L  L  I  I  *  A  N  A  F  T  Q  L  D  *  A  A  M  I  I  S  I  I  I  S  C  L  N  I  T  P  L  A  D  N  L  I  L  I  N  M  L  M  F  *  F  N  N  T  L  N  N  *  R :   L  C  M  T  M  E  Q  G  S  L  S  *  L  E  W  A  K  L  V  V  A  Q  M  L  *  P  K  T  V  L  M  E  E  P  V  Q  K  I  *  I  M  Q  T  S  C  S  T  I  G  *  R  V  L  W  M  N  S  M  A  I  H  Q  M  Q  N  S  S  T  S  M  L  M  I  S  S  K  I  *  L  T  I  P  Q  H  L  :  D  L  E  *  R  M  L  D  V  V  E  *  E  G  I  T  G  K  *  H  V  F  H  Y  K  I  L  A  K  I  E  M  N  M  Y  F  G  M  H  F  I  Q  V  K  L  Q  I  *  L  L  G  E  D  H  I  E  L  K  D  H  Q  M  L  I  L  L  I  F  S  V  *  L  N  Y  E  D  K  R  *  S  *  K  Y  I  Y  F  C  G  I  C  I  I  V  F  Y  D  V  L  *  V  D  N  N  *  F  Y  Y  L  R  N  V  M  V  T  M  T  C  </first_frame>
            <second_frame>  N  F  S  S  M  N  *  S  L  R  H  T  L  *  N  D  *  L  I  N  L  K  T  H  N  I  V  Y  Y  I  I  R  Q  L  F  E  T  F  L  Q  A  T  Q  F  S  T  S  I  L  Y  I  F  F  L  P  P  *  L  L  F  V  *  *  N  G  C  W  G  S  K  E  E  M  D  S  G  V  C  S  G  S  F  R  I  E  F  G  G  K  C  K  C  T  T  S  A  L  L  F  Y  I  W  *  F  I  S  G  *  W  E  *  Q  Q  Y  S  V  I  G  *  G  *  L  L  A  L  W  Y  *  L  S  *  W  S  N  W  K  V  F  Q  W  K  N  N  C  *  C  H  C :   *  A  F  G  V  R  *  L  Y  S  T  L  C  I  C  K  G  *  R  H  S  Q  R  C  *  F  C  I  C  C  C  W  N  *  R  R  N  W  S  T  I   : G  S  K  D  Y  V  W  W  S  G  K  *  L  Q  E  H  S  A  T  S  G  A  N  T  W  R  *  K  F  C  C  *  L  F  E  Q  M  H  L  L  N  W  I  R  Q  Q  *  L  S  Q  *  L  F  H  A  S  I  L  L  H  *  Q  T  I  *  S  *  S  I  C  *  C  S  N  S  T  I  L  S  T  T  K   : D  F  V  *  L  W  S  K  E  V  C  L  N  W  S  G  P  N  W  L  *  P  K  C  S  S  P  K  Q  S  *  W  K  N  L  C  R  K  Y  K  *  C  K  Q  V  V  Q  Q  *  A  K  G  Y  C  G  *  I  Q  W  Q  Y  T  R  C  K  I  H  L  H  Q  C  L  *  Y  L  P  R  F  N  *  Q  S  L  S  I  W :   I  *  S  N  E  C  W  M  L  W  S  R  K  E  *  R  A  N  N  M  S  S  T  T  K  S  L  P  K  *  R  *  I  C  I  L  G  C  I  S  S  R  *  S  C  K  Y  S  C  W  E  K  I  I  *  S  *  K  I  I  R  C  L  S  F  *  Y  S  A  F  S  S  T  M  K  I  R  D  E  A  K  N  I  Y  I  F  V  E  F  V  L  L  C  S  M  M  Y  Y  E  L  I  I  I  N  F  I  I  *  E  M  L  W  L  L  *  H  V </second_frame>
            <third_frame>   T  S  H  Q  *  I  E  V  F  V  T  L  S  K  M  T  S  S  L  T  S  K  H  I  I  *  Y  T  I  *  L  D  N  C  L  K  L  F  F  K  L  L  N  F  P  L  V  Y  Y  T  F  F  F  F  P  L  S  F  F  L  F  D  E  M  G  A  G  E  V  K  R  R  W  I  V  V  Y  V  V  V  V  L  G  L  N  L  G  V  N  V  N  A  Q  Q  V  P  C  Y  F  I  F  G  D  S  L  V  D  N  G  N  N  N  N  I  Q  S  L  A  R  A  N  Y  L  P  Y  G  I  D  Y  P  D  G  P  T  G  R  F  S  N  G  K  T  T  V  D  V  I   : A  E  L  L  G  F  D  D  Y  I  P  P  Y  A  S  A  R  G  E  D  I  L  K  G  V  N  F  A  S  A  A  A  G  I  R  E  E  T  G  Q  Q  L  :  G  A  R  I  T  F  G  G  Q  V  N  N  Y  R  N  T  V  Q  Q  V  V  Q  I  L  G  D  E  N  S  A  A  N  Y  L  S  K  C  I  Y  S  I  G  L  G  S  N  D  Y  L  N  N  Y  F  M  P  Q  Y  Y  S  T  S  R  Q  F  N  P  D  Q  Y  A  D  V  L  I  Q  Q  Y  S  Q  Q  L  K  :  T  L  Y  D  Y  G  A  R  K  F  V  L  I  G  V  G  Q  I  G  C  S  P  N  A  L  A  Q  N  S  P  D  G  R  T  C  A  E  N  I  N  N  A  N  K  L  F  N  N  R  L  K  G  I  V  D  E  F  N  G  N  T  P  D  A  K  F  I  Y  I  N  A  Y  D  I  F  Q  D  L  I  D  N  P  S  A  F   : G  F  R  V  T  N  A  G  C  C  G  V  G  R  N  N  G  Q  I  T  C  L  P  L  Q  N  P  C  Q  N  R  D  E  Y  V  F  W  D  A  F  H  P  G  E  A  A  N  I  V  V  G  R  R  S  Y  R  A  E  R  S  S  D  A  Y  P  F  D  I  Q  R  L  A  Q  L  *  R  *  E  M  K  L  K  I  Y  I  F  L  W  N  L  Y  Y  C  V  L  *  C  I  M  S  *  *  *  L  I  L  L  F  E  K  C  Y  G  Y  Y  D  M   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0100O21.2" strand="+"/>
                <serials PGL_serial="22" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="103246" stop="103597"/>
                    <exon start="104284" stop="104408"/>
                    <exon start="104535" stop="104780"/>
                    <exon start="104900" stop="105155"/>
                    <exon start="105250" stop="105473"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1200</number_coding_nucleotides>
                  <number_encoded_amino_acids>400</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LDNCLKLFFKLLNFPLVYYTFFFFPLSFFLFDEMGAGEVKRRWIVVYVVVVLGLNLGVNVNAQQVPCYFIFGDSLVDNGNNNNIQSLARANYLPYGIDYPDGPTGRFSNGKTTVDVIAELLGFDDYIPPYASARGEDILKGVNFASAAAGIREETGQQLGARITFGGQVNNYRNTVQQVVQILGDENSAANYLSKCIYSIGLGSNDYLNNYFMPQYYSTSRQFNPDQYADVLIQQYSQQLKTLYDYGARKFVLIGVGQIGCSPNALAQNSPDGRTCAENINNANKLFNNRLKGIVDEFNGNTPDAKFIYINAYDIFQDLIDNPSAFGFRVTNAGCCGVGRNNGQITCLPLQNPCQNRDEYVFWDAFHPGEAANIVVGRRSYRAERSSDAYPFDIQRLAQL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="103154" e_stop="103597"/>
            <exon e_start="104284" e_stop="104408"/>
            <exon e_start="104535" e_stop="105155"/>
            <exon e_start="105250" e_stop="105591"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.997" e_score="1.000"/>
          <exon-only e_score="0.991"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="103154" e_stop="103597" e_length="444"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.995">
            <gDNA_intron_boundary i_start="103598" i_stop="104283" i_length="686"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="104284" e_stop="104408" e_length="125"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.990">
            <gDNA_intron_boundary i_start="104409" i_stop="104534" i_length="126"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="104535" e_stop="105155" e_length="621"/>
          </exon>
          <intron i_serial="3" don_prob="0.997" acc_prob="0.997">
            <gDNA_intron_boundary i_start="105156" i_stop="105249" i_length="94"/>
          </intron>
          <exon e_serial="4" e_score="0.991">
            <gDNA_exon_boundary e_start="105250" e_stop="105591" e_length="342"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103154" stop="103475"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E313458" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103280" stop="103597"/>
              <exon start="104284" stop="104408"/>
              <exon start="104535" stop="104681"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E347345" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103289" stop="103597"/>
              <exon start="104284" stop="104408"/>
              <exon start="104535" stop="104769"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E467535" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103290" stop="103597"/>
              <exon start="104284" stop="104408"/>
              <exon start="104535" stop="104749"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E347573" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103292" stop="103597"/>
              <exon start="104284" stop="104408"/>
              <exon start="104535" stop="104588"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E321845" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103292" stop="103597"/>
              <exon start="104284" stop="104408"/>
              <exon start="104535" stop="104548"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E358775" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103295" stop="103597"/>
              <exon start="104284" stop="104408"/>
              <exon start="104535" stop="104708"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E324184" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103295" stop="103597"/>
              <exon start="104284" stop="104408"/>
              <exon start="104535" stop="104650"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319862" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103295" stop="103547"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289904" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103299" stop="103597"/>
              <exon start="104284" stop="104408"/>
              <exon start="104535" stop="104653"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E567918" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103331" stop="103597"/>
              <exon start="104284" stop="104408"/>
              <exon start="104535" stop="104662"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265551" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104556" stop="105155"/>
              <exon start="105250" stop="105336"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345643" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="105064" stop="105155"/>
              <exon start="105250" stop="105591"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E218545" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="105107" stop="105155"/>
              <exon start="105250" stop="105591"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E218953" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="22" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAACTTCTCATCAATGAATTGAAGTCTTCGTCACACTCTCTAAAATGACTAGCTCATTAACCTCAAAACACATAATATAGTATACTATATAATTAGACAATTGTTTGAAACTTTTCTTCAAGCTACTCAATTTTCCACTAGTATACTATACATTTTTTTTCTTCCCCCTTAGCTTCTTTTTGTTTGATGAAATGGGTGCTGGGGAAGTAAAGAGGAGATGGATAGTGGTGTATGTAGTGGTAGTTTTAGGATTGAATTTGGGGGTAAATGTAAATGCACAACAAGTGCCTTGTTATTTTATATTTGGTGATTCATTAGTGGATAATGGGAATAACAACAATATTCAGTCATTGGCTAGGGCTAATTACTTGCCTTATGGTATTGATTATCCTGATGGTCCAACTGGAAGGTTTTCCAATGGAAAAACAACTGTTGATGTCATTG : CTGAGCTTTTGGGGTTCGATGATTATATTCCACCCTATGCATCTGCAAGGGGTGAAGACATTCTCAAAGGTGTTAATTTTGCATCTGCTGCTGCTGGAATTAGAGAAGAAACTGGTCAACAATTG : GGAGCAAGGATTACGTTTGGTGGTCAGGTAAATAATTACAGGAACACAGTGCAACAAGTGGTGCAAATACTTGGAGATGAAAATTCTGCTGCTAATTATTTGAGCAAATGCATTTACTCAATTGGATTAGGCAGCAATGATTATCTCAATAATTATTTCATGCCTCAATATTACTCCACTAGCAGACAATTTAATCCTGATCAATATGCTGATGTTCTAATTCAACAATACTCTCAACAACTAAAGGTGAGTTTGAATCACCTGATTAAAAGTAATCGATAAACATATAACATGTTTAAAGTAAAGTACTTGCGTTTTAATATTAGAGATAATATCATAAAAGATCTAATTGGCTTTTACATCAGACTTTGTATGACTATGGAGCAAGGAAGTTTGTCTTAATTGGAGTGGGCCAAATTGGTTGTAGCCCAAATGCTCTAGCCCAAAACAGTCCTGATGGAAGAACCTGTGCAGAAAATATAAATAATGCAAACAAGTTGTTCAACAATAGGCTAAAGGGTATTGTGGATGAATTCAATGGCAATACACCAGATGCAAAATTCATCTACATCAATGCTTATGATATCTTCCAAGATTTAATTGACAATCCCTCAGCATTTG : GATTTAGAGTAACGAATGCTGGATGTTGTGGAGTAGGAAGGAATAACGGGCAAATAACATGTCTTCCACTACAAAATCCTTGCCAAAATAGAGATGAATATGTATTTTGGGATGCATTTCATCCAGGTGAAGCTGCAAATATAGTTGTTGGGAGAAGATCATATAGAGCTGAAAGATCATCAGATGCTTATCCTTTTGATATTCAGCGTTTAGCTCAACTATGAAGATAAGAGATGAAGCTAAAAATATATATATTTTTGTGGAATTTGTATTATTGTGTTCTATGATGTATTATGAGTTGATAATAATTAATTTTATTATTTGAGAAATGTTATGGTTACT</gDNA_template>
            <first_frame> *  L  L  I  N  E  L  K  S  S  S  H  S  L  K  *  L  A  H  *  P  Q  N  T  *  Y  S  I  L  Y  N  *  T  I  V  *  N  F  S  S  S  Y  S  I  F  H  *  Y  T  I  H  F  F  S  S  P  L  A  S  F  C  L  M  K  W  V  L  G  K  *  R  G  D  G  *  W  C  M  *  W  *  F  *  D  *  I  W  G  *  M  *  M  H  N  K  C  L  V  I  L  Y  L  V  I  H  *  W  I  M  G  I  T  T  I  F  S  H  W  L  G  L  I  T  C  L  M  V  L  I  I  L  M  V  Q  L  E  G  F  P  M  E  K  Q  L  L  M  S  L  :  L  S  F  W  G  S  M  I  I  F  H  P  M  H  L  Q  G  V  K  T  F  S  K  V  L  I  L  H  L  L  L  L  E  L  E  K  K  L  V  N  N  W :   E  Q  G  L  R  L  V  V  R  *  I  I  T  G  T  Q  C  N  K  W  C  K  Y  L  E  M  K  I  L  L  L  I  I  *  A  N  A  F  T  Q  L  D  *  A  A  M  I  I  S  I  I  I  S  C  L  N  I  T  P  L  A  D  N  L  I  L  I  N  M  L  M  F  *  F  N  N  T  L  N  N  *  R  *  V  *  I  T  *  L  K  V  I  D  K  H  I  T  C  L  K  *  S  T  C  V  L  I  L  E  I  I  S  *  K  I  *  L  A  F  T  S  D  F  V  *  L  W  S  K  E  V  C  L  N  W  S  G  P  N  W  L  *  P  K  C  S  S  P  K  Q  S  *  W  K  N  L  C  R  K  Y  K  *  C  K  Q  V  V  Q  Q  *  A  K  G  Y  C  G  *  I  Q  W  Q  Y  T  R  C  K  I  H  L  H  Q  C  L  *  Y  L  P  R  F  N  *  Q  S  L  S  I  W :   I  *  S  N  E  C  W  M  L  W  S  R  K  E  *  R  A  N  N  M  S  S  T  T  K  S  L  P  K  *  R  *  I  C  I  L  G  C  I  S  S  R  *  S  C  K  Y  S  C  W  E  K  I  I  *  S  *  K  I  I  R  C  L  S  F  *  Y  S  A  F  S  S  T  M  K  I  R  D  E  A  K  N  I  Y  I  F  V  E  F  V  L  L  C  S  M  M  Y  Y  E  L  I  I  I  N  F  I  I  *  E  M  L  W  L   </first_frame>
            <second_frame>  N  F  S  S  M  N  *  S  L  R  H  T  L  *  N  D  *  L  I  N  L  K  T  H  N  I  V  Y  Y  I  I  R  Q  L  F  E  T  F  L  Q  A  T  Q  F  S  T  S  I  L  Y  I  F  F  L  P  P  *  L  L  F  V  *  *  N  G  C  W  G  S  K  E  E  M  D  S  G  V  C  S  G  S  F  R  I  E  F  G  G  K  C  K  C  T  T  S  A  L  L  F  Y  I  W  *  F  I  S  G  *  W  E  *  Q  Q  Y  S  V  I  G  *  G  *  L  L  A  L  W  Y  *  L  S  *  W  S  N  W  K  V  F  Q  W  K  N  N  C  *  C  H  C :   *  A  F  G  V  R  *  L  Y  S  T  L  C  I  C  K  G  *  R  H  S  Q  R  C  *  F  C  I  C  C  C  W  N  *  R  R  N  W  S  T  I   : G  S  K  D  Y  V  W  W  S  G  K  *  L  Q  E  H  S  A  T  S  G  A  N  T  W  R  *  K  F  C  C  *  L  F  E  Q  M  H  L  L  N  W  I  R  Q  Q  *  L  S  Q  *  L  F  H  A  S  I  L  L  H  *  Q  T  I  *  S  *  S  I  C  *  C  S  N  S  T  I  L  S  T  T  K  G  E  F  E  S  P  D  *  K  *  S  I  N  I  *  H  V  *  S  K  V  L  A  F  *  Y  *  R  *  Y  H  K  R  S  N  W  L  L  H  Q  T  L  Y  D  Y  G  A  R  K  F  V  L  I  G  V  G  Q  I  G  C  S  P  N  A  L  A  Q  N  S  P  D  G  R  T  C  A  E  N  I  N  N  A  N  K  L  F  N  N  R  L  K  G  I  V  D  E  F  N  G  N  T  P  D  A  K  F  I  Y  I  N  A  Y  D  I  F  Q  D  L  I  D  N  P  S  A  F   : G  F  R  V  T  N  A  G  C  C  G  V  G  R  N  N  G  Q  I  T  C  L  P  L  Q  N  P  C  Q  N  R  D  E  Y  V  F  W  D  A  F  H  P  G  E  A  A  N  I  V  V  G  R  R  S  Y  R  A  E  R  S  S  D  A  Y  P  F  D  I  Q  R  L  A  Q  L  *  R  *  E  M  K  L  K  I  Y  I  F  L  W  N  L  Y  Y  C  V  L  *  C  I  M  S  *  *  *  L  I  L  L  F  E  K  C  Y  G  Y  </second_frame>
            <third_frame>   T  S  H  Q  *  I  E  V  F  V  T  L  S  K  M  T  S  S  L  T  S  K  H  I  I  *  Y  T  I  *  L  D  N  C  L  K  L  F  F  K  L  L  N  F  P  L  V  Y  Y  T  F  F  F  F  P  L  S  F  F  L  F  D  E  M  G  A  G  E  V  K  R  R  W  I  V  V  Y  V  V  V  V  L  G  L  N  L  G  V  N  V  N  A  Q  Q  V  P  C  Y  F  I  F  G  D  S  L  V  D  N  G  N  N  N  N  I  Q  S  L  A  R  A  N  Y  L  P  Y  G  I  D  Y  P  D  G  P  T  G  R  F  S  N  G  K  T  T  V  D  V  I   : A  E  L  L  G  F  D  D  Y  I  P  P  Y  A  S  A  R  G  E  D  I  L  K  G  V  N  F  A  S  A  A  A  G  I  R  E  E  T  G  Q  Q  L  :  G  A  R  I  T  F  G  G  Q  V  N  N  Y  R  N  T  V  Q  Q  V  V  Q  I  L  G  D  E  N  S  A  A  N  Y  L  S  K  C  I  Y  S  I  G  L  G  S  N  D  Y  L  N  N  Y  F  M  P  Q  Y  Y  S  T  S  R  Q  F  N  P  D  Q  Y  A  D  V  L  I  Q  Q  Y  S  Q  Q  L  K  V  S  L  N  H  L  I  K  S  N  R  *  T  Y  N  M  F  K  V  K  Y  L  R  F  N  I  R  D  N  I  I  K  D  L  I  G  F  Y  I  R  L  C  M  T  M  E  Q  G  S  L  S  *  L  E  W  A  K  L  V  V  A  Q  M  L  *  P  K  T  V  L  M  E  E  P  V  Q  K  I  *  I  M  Q  T  S  C  S  T  I  G  *  R  V  L  W  M  N  S  M  A  I  H  Q  M  Q  N  S  S  T  S  M  L  M  I  S  S  K  I  *  L  T  I  P  Q  H  L  :  D  L  E  *  R  M  L  D  V  V  E  *  E  G  I  T  G  K  *  H  V  F  H  Y  K  I  L  A  K  I  E  M  N  M  Y  F  G  M  H  F  I  Q  V  K  L  Q  I  *  L  L  G  E  D  H  I  E  L  K  D  H  Q  M  L  I  L  L  I  F  S  V  *  L  N  Y  E  D  K  R  *  S  *  K  Y  I  Y  F  C  G  I  C  I  I  V  F  Y  D  V  L  *  V  D  N  N  *  F  Y  Y  L  R  N  V  M  V  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0100O21.2" strand="+"/>
                <serials PGL_serial="22" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="103246" stop="103597"/>
                    <exon start="104284" stop="104408"/>
                    <exon start="104535" stop="104816"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>756</number_coding_nucleotides>
                  <number_encoded_amino_acids>252</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LDNCLKLFFKLLNFPLVYYTFFFFPLSFFLFDEMGAGEVKRRWIVVYVVVVLGLNLGVNVNAQQVPCYFIFGDSLVDNGNNNNIQSLARANYLPYGIDYPDGPTGRFSNGKTTVDVIAELLGFDDYIPPYASARGEDILKGVNFASAAAGIREETGQQLGARITFGGQVNNYRNTVQQVVQILGDENSAANYLSKCIYSIGLGSNDYLNNYFMPQYYSTSRQFNPDQYADVLIQQYSQQLKVSLNHLIKSNR*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0100O21.2" strand="+"/>
                <serials PGL_serial="22" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="104867" stop="105155"/>
                    <exon start="105250" stop="105473"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>510</number_coding_nucleotides>
                  <number_encoded_amino_acids>170</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YHKRSNWLLHQTLYDYGARKFVLIGVGQIGCSPNALAQNSPDGRTCAENINNANKLFNNRLKGIVDEFNGNTPDAKFIYINAYDIFQDLIDNPSAFGFRVTNAGCCGVGRNNGQITCLPLQNPCQNRDEYVFWDAFHPGEAANIVVGRRSYRAERSSDAYPFDIQRLAQL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="103084" e_stop="103142"/>
            <exon e_start="103326" e_stop="103597"/>
            <exon e_start="104284" e_stop="104408"/>
            <exon e_start="104535" e_stop="104780"/>
            <exon e_start="104900" e_stop="105155"/>
            <exon e_start="105250" e_stop="105601"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.931" e_score="0.559"/>
          <exon-intron don_prob="1.000" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.886" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.997" e_score="1.000"/>
          <exon-only e_score="0.991"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.559">
            <gDNA_exon_boundary e_start="103084" e_stop="103142" e_length="59"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.931">
            <gDNA_intron_boundary i_start="103143" i_stop="103325" i_length="183"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="103326" e_stop="103597" e_length="272"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.995">
            <gDNA_intron_boundary i_start="103598" i_stop="104283" i_length="686"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="104284" e_stop="104408" e_length="125"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.990">
            <gDNA_intron_boundary i_start="104409" i_stop="104534" i_length="126"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="104535" e_stop="104780" e_length="246"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="0.886">
            <gDNA_intron_boundary i_start="104781" i_stop="104899" i_length="119"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="104900" e_stop="105155" e_length="256"/>
          </exon>
          <intron i_serial="5" don_prob="0.997" acc_prob="0.997">
            <gDNA_intron_boundary i_start="105156" i_stop="105249" i_length="94"/>
          </intron>
          <exon e_serial="6" e_score="0.991">
            <gDNA_exon_boundary e_start="105250" e_stop="105601" e_length="352"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103084" stop="103142"/>
              <exon start="103326" stop="103597"/>
              <exon start="104284" stop="104408"/>
              <exon start="104535" stop="104766"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E326811" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103331" stop="103597"/>
              <exon start="104284" stop="104408"/>
              <exon start="104535" stop="104662"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265551" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103335" stop="103597"/>
              <exon start="104284" stop="104408"/>
              <exon start="104535" stop="104780"/>
              <exon start="104900" stop="104913"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E327240" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104401" stop="104408"/>
              <exon start="104535" stop="104780"/>
              <exon start="104900" stop="105155"/>
              <exon start="105250" stop="105447"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E332124" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104622" stop="104780"/>
              <exon start="104900" stop="105155"/>
              <exon start="105250" stop="105601"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E214301" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="105064" stop="105155"/>
              <exon start="105250" stop="105591"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E218545" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="105107" stop="105155"/>
              <exon start="105250" stop="105591"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E218953" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="22" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GATGAATTATATAAATGGATTCTATAACTGCTCACATTATCTCAGCCGCGTGAAAATAA : CTTCTTTTTGTTTGATGAAATGGGTGCTGGGGAAGTAAAGAGGAGATGGATAGTGGTGTATGTAGTGGTAGTTTTAGGATTGAATTTGGGGGTAAATGTAAATGCACAACAAGTGCCTTGTTATTTTATATTTGGTGATTCATTAGTGGATAATGGGAATAACAACAATATTCAGTCATTGGCTAGGGCTAATTACTTGCCTTATGGTATTGATTATCCTGATGGTCCAACTGGAAGGTTTTCCAATGGAAAAACAACTGTTGATGTCATTG : CTGAGCTTTTGGGGTTCGATGATTATATTCCACCCTATGCATCTGCAAGGGGTGAAGACATTCTCAAAGGTGTTAATTTTGCATCTGCTGCTGCTGGAATTAGAGAAGAAACTGGTCAACAATTG : GGAGCAAGGATTACGTTTGGTGGTCAGGTAAATAATTACAGGAACACAGTGCAACAAGTGGTGCAAATACTTGGAGATGAAAATTCTGCTGCTAATTATTTGAGCAAATGCATTTACTCAATTGGATTAGGCAGCAATGATTATCTCAATAATTATTTCATGCCTCAATATTACTCCACTAGCAGACAATTTAATCCTGATCAATATGCTGATGTTCTAATTCAACAATACTCTCAACAACTAAAG : ACTTTGTATGACTATGGAGCAAGGAAGTTTGTCTTAATTGGAGTGGGCCAAATTGGTTGTAGCCCAAATGCTCTAGCCCAAAACAGTCCTGATGGAAGAACCTGTGCAGAAAATATAAATAATGCAAACAAGTTGTTCAACAATAGGCTAAAGGGTATTGTGGATGAATTCAATGGCAATACACCAGATGCAAAATTCATCTACATCAATGCTTATGATATCTTCCAAGATTTAATTGACAATCCCTCAGCATTTG : GATTTAGAGTAACGAATGCTGGATGTTGTGGAGTAGGAAGGAATAACGGGCAAATAACATGTCTTCCACTACAAAATCCTTGCCAAAATAGAGATGAATATGTATTTTGGGATGCATTTCATCCAGGTGAAGCTGCAAATATAGTTGTTGGGAGAAGATCATATAGAGCTGAAAGATCATCAGATGCTTATCCTTTTGATATTCAGCGTTTAGCTCAACTATGAAGATAAGAGATGAAGCTAAAAATATATATATTTTTGTGGAATTTGTATTATTGTGTTCTATGATGTATTATGAGTTGATAATAATTAATTTTATTATTTGAGAAATGTTATGGTTACTATGACATGTG</gDNA_template>
            <first_frame> D  E  L  Y  K  W  I  L  *  L  L  T  L  S  Q  P  R  E  N  N :   F  F  L  F  D  E  M  G  A  G  E  V  K  R  R  W  I  V  V  Y  V  V  V  V  L  G  L  N  L  G  V  N  V  N  A  Q  Q  V  P  C  Y  F  I  F  G  D  S  L  V  D  N  G  N  N  N  N  I  Q  S  L  A  R  A  N  Y  L  P  Y  G  I  D  Y  P  D  G  P  T  G  R  F  S  N  G  K  T  T  V  D  V  I   : A  E  L  L  G  F  D  D  Y  I  P  P  Y  A  S  A  R  G  E  D  I  L  K  G  V  N  F  A  S  A  A  A  G  I  R  E  E  T  G  Q  Q  L  :  G  A  R  I  T  F  G  G  Q  V  N  N  Y  R  N  T  V  Q  Q  V  V  Q  I  L  G  D  E  N  S  A  A  N  Y  L  S  K  C  I  Y  S  I  G  L  G  S  N  D  Y  L  N  N  Y  F  M  P  Q  Y  Y  S  T  S  R  Q  F  N  P  D  Q  Y  A  D  V  L  I  Q  Q  Y  S  Q  Q  L  K  :  T  L  Y  D  Y  G  A  R  K  F  V  L  I  G  V  G  Q  I  G  C  S  P  N  A  L  A  Q  N  S  P  D  G  R  T  C  A  E  N  I  N  N  A  N  K  L  F  N  N  R  L  K  G  I  V  D  E  F  N  G  N  T  P  D  A  K  F  I  Y  I  N  A  Y  D  I  F  Q  D  L  I  D  N  P  S  A  F   : G  F  R  V  T  N  A  G  C  C  G  V  G  R  N  N  G  Q  I  T  C  L  P  L  Q  N  P  C  Q  N  R  D  E  Y  V  F  W  D  A  F  H  P  G  E  A  A  N  I  V  V  G  R  R  S  Y  R  A  E  R  S  S  D  A  Y  P  F  D  I  Q  R  L  A  Q  L  *  R  *  E  M  K  L  K  I  Y  I  F  L  W  N  L  Y  Y  C  V  L  *  C  I  M  S  *  *  *  L  I  L  L  F  E  K  C  Y  G  Y  Y  D  M   </first_frame>
            <second_frame>  M  N  Y  I  N  G  F  Y  N  C  S  H  Y  L  S  R  V  K  I   : T  S  F  C  L  M  K  W  V  L  G  K  *  R  G  D  G  *  W  C  M  *  W  *  F  *  D  *  I  W  G  *  M  *  M  H  N  K  C  L  V  I  L  Y  L  V  I  H  *  W  I  M  G  I  T  T  I  F  S  H  W  L  G  L  I  T  C  L  M  V  L  I  I  L  M  V  Q  L  E  G  F  P  M  E  K  Q  L  L  M  S  L  :  L  S  F  W  G  S  M  I  I  F  H  P  M  H  L  Q  G  V  K  T  F  S  K  V  L  I  L  H  L  L  L  L  E  L  E  K  K  L  V  N  N  W :   E  Q  G  L  R  L  V  V  R  *  I  I  T  G  T  Q  C  N  K  W  C  K  Y  L  E  M  K  I  L  L  L  I  I  *  A  N  A  F  T  Q  L  D  *  A  A  M  I  I  S  I  I  I  S  C  L  N  I  T  P  L  A  D  N  L  I  L  I  N  M  L  M  F  *  F  N  N  T  L  N  N  *  R :   L  C  M  T  M  E  Q  G  S  L  S  *  L  E  W  A  K  L  V  V  A  Q  M  L  *  P  K  T  V  L  M  E  E  P  V  Q  K  I  *  I  M  Q  T  S  C  S  T  I  G  *  R  V  L  W  M  N  S  M  A  I  H  Q  M  Q  N  S  S  T  S  M  L  M  I  S  S  K  I  *  L  T  I  P  Q  H  L  :  D  L  E  *  R  M  L  D  V  V  E  *  E  G  I  T  G  K  *  H  V  F  H  Y  K  I  L  A  K  I  E  M  N  M  Y  F  G  M  H  F  I  Q  V  K  L  Q  I  *  L  L  G  E  D  H  I  E  L  K  D  H  Q  M  L  I  L  L  I  F  S  V  *  L  N  Y  E  D  K  R  *  S  *  K  Y  I  Y  F  C  G  I  C  I  I  V  F  Y  D  V  L  *  V  D  N  N  *  F  Y  Y  L  R  N  V  M  V  T  M  T  C  </second_frame>
            <third_frame>   *  I  I  *  M  D  S  I  T  A  H  I  I  S  A  A  *  K  *  :  L  L  F  V  *  *  N  G  C  W  G  S  K  E  E  M  D  S  G  V  C  S  G  S  F  R  I  E  F  G  G  K  C  K  C  T  T  S  A  L  L  F  Y  I  W  *  F  I  S  G  *  W  E  *  Q  Q  Y  S  V  I  G  *  G  *  L  L  A  L  W  Y  *  L  S  *  W  S  N  W  K  V  F  Q  W  K  N  N  C  *  C  H  C :   *  A  F  G  V  R  *  L  Y  S  T  L  C  I  C  K  G  *  R  H  S  Q  R  C  *  F  C  I  C  C  C  W  N  *  R  R  N  W  S  T  I   : G  S  K  D  Y  V  W  W  S  G  K  *  L  Q  E  H  S  A  T  S  G  A  N  T  W  R  *  K  F  C  C  *  L  F  E  Q  M  H  L  L  N  W  I  R  Q  Q  *  L  S  Q  *  L  F  H  A  S  I  L  L  H  *  Q  T  I  *  S  *  S  I  C  *  C  S  N  S  T  I  L  S  T  T  K   : D  F  V  *  L  W  S  K  E  V  C  L  N  W  S  G  P  N  W  L  *  P  K  C  S  S  P  K  Q  S  *  W  K  N  L  C  R  K  Y  K  *  C  K  Q  V  V  Q  Q  *  A  K  G  Y  C  G  *  I  Q  W  Q  Y  T  R  C  K  I  H  L  H  Q  C  L  *  Y  L  P  R  F  N  *  Q  S  L  S  I  W :   I  *  S  N  E  C  W  M  L  W  S  R  K  E  *  R  A  N  N  M  S  S  T  T  K  S  L  P  K  *  R  *  I  C  I  L  G  C  I  S  S  R  *  S  C  K  Y  S  C  W  E  K  I  I  *  S  *  K  I  I  R  C  L  S  F  *  Y  S  A  F  S  S  T  M  K  I  R  D  E  A  K  N  I  Y  I  F  V  E  F  V  L  L  C  S  M  M  Y  Y  E  L  I  I  I  N  F  I  I  *  E  M  L  W  L  L  *  H  V </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0100O21.2" strand="+"/>
                <serials PGL_serial="22" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="103111" stop="103142"/>
                    <exon start="103326" stop="103597"/>
                    <exon start="104284" stop="104408"/>
                    <exon start="104535" stop="104780"/>
                    <exon start="104900" stop="105155"/>
                    <exon start="105250" stop="105473"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1152</number_coding_nucleotides>
                  <number_encoded_amino_acids>384</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLTLSQPRENNFFLFDEMGAGEVKRRWIVVYVVVVLGLNLGVNVNAQQVPCYFIFGDSLVDNGNNNNIQSLARANYLPYGIDYPDGPTGRFSNGKTTVDVIAELLGFDDYIPPYASARGEDILKGVNFASAAAGIREETGQQLGARITFGGQVNNYRNTVQQVVQILGDENSAANYLSKCIYSIGLGSNDYLNNYFMPQYYSTSRQFNPDQYADVLIQQYSQQLKTLYDYGARKFVLIGVGQIGCSPNALAQNSPDGRTCAENINNANKLFNNRLKGIVDEFNGNTPDAKFIYINAYDIFQDLIDNPSAFGFRVTNAGCCGVGRNNGQITCLPLQNPCQNRDEYVFWDAFHPGEAANIVVGRRSYRAERSSDAYPFDIQRLAQL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="23" PGL_strand="+" PGL_start="109032" PGL_stop="111202"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="109032" e_stop="109345"/>
            <exon e_start="109898" e_stop="110022"/>
            <exon e_start="110115" e_stop="110360"/>
            <exon e_start="110471" e_stop="110726"/>
            <exon e_start="110815" e_stop="111202"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.991" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.850" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="109032" e_stop="109345" e_length="314"/>
          </exon>
          <intron i_serial="1" don_prob="0.991" acc_prob="0.997">
            <gDNA_intron_boundary i_start="109346" i_stop="109897" i_length="552"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="109898" e_stop="110022" e_length="125"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.994">
            <gDNA_intron_boundary i_start="110023" i_stop="110114" i_length="92"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="110115" e_stop="110360" e_length="246"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.850">
            <gDNA_intron_boundary i_start="110361" i_stop="110470" i_length="110"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="110471" e_stop="110726" e_length="256"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="110727" i_stop="110814" i_length="88"/>
          </intron>
          <exon e_serial="5" e_score="0.995">
            <gDNA_exon_boundary e_start="110815" e_stop="111202" e_length="388"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="109032" stop="109345"/>
              <exon start="109898" stop="110022"/>
              <exon start="110115" stop="110360"/>
              <exon start="110471" stop="110726"/>
              <exon start="110815" stop="111111"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E745380" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="109060" stop="109345"/>
              <exon start="109898" stop="110022"/>
              <exon start="110115" stop="110164"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E365885" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="109308" stop="109345"/>
              <exon start="109898" stop="110022"/>
              <exon start="110115" stop="110360"/>
              <exon start="110471" stop="110514"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E236486" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="109898" stop="110022"/>
              <exon start="110115" stop="110289"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E240535" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="110342" stop="110360"/>
              <exon start="110471" stop="110726"/>
              <exon start="110815" stop="110953"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E236306" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="110342" stop="110360"/>
              <exon start="110471" stop="110690"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E240015" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="110556" stop="110726"/>
              <exon start="110815" stop="111098"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E250859" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="110699" stop="110726"/>
              <exon start="110815" stop="111202"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E279303" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="110898" stop="111120"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277536" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="23" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CATCCCACTACTCATTACTTTAACTAACTACTTAGCCTAGCTACTTCTAAAGCTAAGGGTCTCAAAAATGGGTAGTGAGATGAGGAGATGTATATTGGTGGTGCTTTTAGGGTTTATGAGTTTGGGAGATTATTATGAAACAAATGCACAACAAGTGCCTTGTTATTTCATATTTGGTGATTCTTTGGTTGATAATGGGAATAACAACAATATTCAGTCATTGGCTAAGGCTAACTACTTGCCTTATGGTATTGATTTCTCTGGAGGTCCAACTGGGAGATTCTCTAATGGAAAAACTACTGTTGATGTCATTG : CGGAACAATTGGGGTTCAATGGTAATATTCCACCCTATGCAACTGCTAGGGGCAGAGATGTTCTCAGAGGTGTCAATTATGCTTCTGCAGCTGCTGGAATTAGAGATGAAACTGGCAGACAATTG : GGAGGAAGAATTAGTTTTTCTGGACAAGTGAATAATTACAGGAACACAGTGCAACAAGTGGTGCAAATATTAGGAAATGAAAATGCAGCTGCTGATTATCTTAAAAAATGCATTTACTCAGTTGGATTAGGCAGCAATGATTATCTCAATAATTATTTTATGCCTCTTTATTATCCCACCAGCAGACAGTTCACTCCTGATCAATATGCTACTGTTCTTATTCAACAATATACTCAACAACTAAAG : ATTTTATATAGTAATGGAGCAAGGAAGTTTGCTTTGATTGGAGTGGGCCAGATAGGGTGCAGCCCAAATGCATTGGCCCAAAACAGCCCAGATGGGAGAACTTGTGTACAAAGAATCAATGTAGCAAATCAATTATTCAACAATAAACTCAAGGCACTTGTTGATAATTTGAATGGAAATACACCTGATGCAAAATTCATCTACATTGATGCTTATGGAATCTTCCAAGACTTAATTGAAAATCCTGCTGCCTTTG : GATTTAGAGTGACAAATGCCGGATGTTGTGGGGTAGGGAGGAACAACGGACAAATTACGTGTCTTCCTTTCCAAAGGCCATGCAGAAATAGGAATGAATATCTATTTTGGGATGCATTTCATCCAACTGAAGCTGCAAATATAGTTGTCGGGAGGAGATCATATAGAGCTCAAAAATCATCTGATGCATATCCTTATGATATTAGTCGTCTAGCTCAAGCTTGATTAAATATCAAATACTCTATATATTAATTATTGTGGAATTGACATCTTTAATTACTATAAGATGTAATCACAAGTGTTTAATATGTTTTTAGTGCTTTTTGCTTTGTTTTAATCATAATATGTTAGTATTTTAAGTCCCCACTTTTTAATGAAGAATTTTTTTT</gDNA_template>
            <first_frame> H  P  T  T  H  Y  F  N  *  L  L  S  L  A  T  S  K  A  K  G  L  K  N  G  *  *  D  E  E  M  Y  I  G  G  A  F  R  V  Y  E  F  G  R  L  L  *  N  K  C  T  T  S  A  L  L  F  H  I  W  *  F  F  G  *  *  W  E  *  Q  Q  Y  S  V  I  G  *  G  *  L  L  A  L  W  Y  *  F  L  W  R  S  N  W  E  I  L  *  W  K  N  Y  C  *  C  H  C :   G  T  I  G  V  Q  W  *  Y  S  T  L  C  N  C  *  G  Q  R  C  S  Q  R  C  Q  L  C  F  C  S  C  W  N  *  R  *  N  W  Q  T  I   : G  R  K  N  *  F  F  W  T  S  E  *  L  Q  E  H  S  A  T  S  G  A  N  I  R  K  *  K  C  S  C  *  L  S  *  K  M  H  L  L  S  W  I  R  Q  Q  *  L  S  Q  *  L  F  Y  A  S  L  L  S  H  Q  Q  T  V  H  S  *  S  I  C  Y  C  S  Y  S  T  I  Y  S  T  T  K   : D  F  I  *  *  W  S  K  E  V  C  F  D  W  S  G  P  D  R  V  Q  P  K  C  I  G  P  K  Q  P  R  W  E  N  L  C  T  K  N  Q  C  S  K  S  I  I  Q  Q  *  T  Q  G  T  C  *  *  F  E  W  K  Y  T  *  C  K  I  H  L  H  *  C  L  W  N  L  P  R  L  N  *  K  S  C  C  L  W :   I  *  S  D  K  C  R  M  L  W  G  R  E  E  Q  R  T  N  Y  V  S  S  F  P  K  A  M  Q  K  *  E  *  I  S  I  L  G  C  I  S  S  N  *  S  C  K  Y  S  C  R  E  E  I  I  *  S  S  K  I  I  *  C  I  S  L  *  Y  *  S  S  S  S  S  L  I  K  Y  Q  I  L  Y  I  L  I  I  V  E  L  T  S  L  I  T  I  R  C  N  H  K  C  L  I  C  F  *  C  F  L  L  C  F  N  H  N  M  L  V  F  *  V  P  T  F  *  *  R  I  F  F </first_frame>
            <second_frame>  I  P  L  L  I  T  L  T  N  Y  L  A  *  L  L  L  K  L  R  V  S  K  M  G  S  E  M  R  R  C  I  L  V  V  L  L  G  F  M  S  L  G  D  Y  Y  E  T  N  A  Q  Q  V  P  C  Y  F  I  F  G  D  S  L  V  D  N  G  N  N  N  N  I  Q  S  L  A  K  A  N  Y  L  P  Y  G  I  D  F  S  G  G  P  T  G  R  F  S  N  G  K  T  T  V  D  V  I   : A  E  Q  L  G  F  N  G  N  I  P  P  Y  A  T  A  R  G  R  D  V  L  R  G  V  N  Y  A  S  A  A  A  G  I  R  D  E  T  G  R  Q  L  :  G  G  R  I  S  F  S  G  Q  V  N  N  Y  R  N  T  V  Q  Q  V  V  Q  I  L  G  N  E  N  A  A  A  D  Y  L  K  K  C  I  Y  S  V  G  L  G  S  N  D  Y  L  N  N  Y  F  M  P  L  Y  Y  P  T  S  R  Q  F  T  P  D  Q  Y  A  T  V  L  I  Q  Q  Y  T  Q  Q  L  K  :  I  L  Y  S  N  G  A  R  K  F  A  L  I  G  V  G  Q  I  G  C  S  P  N  A  L  A  Q  N  S  P  D  G  R  T  C  V  Q  R  I  N  V  A  N  Q  L  F  N  N  K  L  K  A  L  V  D  N  L  N  G  N  T  P  D  A  K  F  I  Y  I  D  A  Y  G  I  F  Q  D  L  I  E  N  P  A  A  F   : G  F  R  V  T  N  A  G  C  C  G  V  G  R  N  N  G  Q  I  T  C  L  P  F  Q  R  P  C  R  N  R  N  E  Y  L  F  W  D  A  F  H  P  T  E  A  A  N  I  V  V  G  R  R  S  Y  R  A  Q  K  S  S  D  A  Y  P  Y  D  I  S  R  L  A  Q  A  *  L  N  I  K  Y  S  I  Y  *  L  L  W  N  *  H  L  *  L  L  *  D  V  I  T  S  V  *  Y  V  F  S  A  F  C  F  V  L  I  I  I  C  *  Y  F  K  S  P  L  F  N  E  E  F  F   </second_frame>
            <third_frame>   S  H  Y  S  L  L  *  L  T  T  *  P  S  Y  F  *  S  *  G  S  Q  K  W  V  V  R  *  G  D  V  Y  W  W  C  F  *  G  L  *  V  W  E  I  I  M  K  Q  M  H  N  K  C  L  V  I  S  Y  L  V  I  L  W  L  I  M  G  I  T  T  I  F  S  H  W  L  R  L  T  T  C  L  M  V  L  I  S  L  E  V  Q  L  G  D  S  L  M  E  K  L  L  L  M  S  L  :  R  N  N  W  G  S  M  V  I  F  H  P  M  Q  L  L  G  A  E  M  F  S  E  V  S  I  M  L  L  Q  L  L  E  L  E  M  K  L  A  D  N  W :   E  E  E  L  V  F  L  D  K  *  I  I  T  G  T  Q  C  N  K  W  C  K  Y  *  E  M  K  M  Q  L  L  I  I  L  K  N  A  F  T  Q  L  D  *  A  A  M  I  I  S  I  I  I  L  C  L  F  I  I  P  P  A  D  S  S  L  L  I  N  M  L  L  F  L  F  N  N  I  L  N  N  *  R :   F  Y  I  V  M  E  Q  G  S  L  L  *  L  E  W  A  R  *  G  A  A  Q  M  H  W  P  K  T  A  Q  M  G  E  L  V  Y  K  E  S  M  *  Q  I  N  Y  S  T  I  N  S  R  H  L  L  I  I  *  M  E  I  H  L  M  Q  N  S  S  T  L  M  L  M  E  S  S  K  T  *  L  K  I  L  L  P  L  :  D  L  E  *  Q  M  P  D  V  V  G  *  G  G  T  T  D  K  L  R  V  F  L  S  K  G  H  A  E  I  G  M  N  I  Y  F  G  M  H  F  I  Q  L  K  L  Q  I  *  L  S  G  G  D  H  I  E  L  K  N  H  L  M  H  I  L  M  I  L  V  V  *  L  K  L  D  *  I  S  N  T  L  Y  I  N  Y  C  G  I  D  I  F  N  Y  Y  K  M  *  S  Q  V  F  N  M  F  L  V  L  F  A  L  F  *  S  *  Y  V  S  I  L  S  P  H  F  L  M  K  N  F  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0100O21.2" strand="+"/>
                <serials PGL_serial="23" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="109072" stop="109345"/>
                    <exon start="109898" stop="110022"/>
                    <exon start="110115" stop="110360"/>
                    <exon start="110471" stop="110726"/>
                    <exon start="110815" stop="111038"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1122</number_coding_nucleotides>
                  <number_encoded_amino_acids>374</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLLKLRVSKMGSEMRRCILVVLLGFMSLGDYYETNAQQVPCYFIFGDSLVDNGNNNNIQSLAKANYLPYGIDFSGGPTGRFSNGKTTVDVIAEQLGFNGNIPPYATARGRDVLRGVNYASAAAGIRDETGRQLGGRISFSGQVNNYRNTVQQVVQILGNENAAADYLKKCIYSVGLGSNDYLNNYFMPLYYPTSRQFTPDQYATVLIQQYTQQLKILYSNGARKFALIGVGQIGCSPNALAQNSPDGRTCVQRINVANQLFNNKLKALVDNLNGNTPDAKFIYIDAYGIFQDLIENPAAFGFRVTNAGCCGVGRNNGQITCLPFQRPCRNRNEYLFWDAFHPTEAANIVVGRRSYRAQKSSDAYPYDISRLAQA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="24" PGL_strand="+" PGL_start="119810" PGL_stop="120430"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="119810" e_stop="120430"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.911"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.911">
            <gDNA_exon_boundary e_start="119810" e_stop="120430" e_length="621"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="119810" stop="120430"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E275393" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="24" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGATTTGCTGAAATCAACTCGGGCAATAACAAAATCATTCTTCCATGCACAACTCTAGGAATCACTTTGTTAATGAAGTTGCTAAGGCTGATGGGTCTGACATTATTGAAGGTCTAGATGTTATCTTTCTTAGGTATCAGAACCGGATTTGTATGAGTAACAGATCTGGATGATTCCTGTCTCCCCCTCTCCCCCCCCCCCCCCCCCCCAAAAAAAAAGCATGCACAACTATGATATCCTCGTTAATAATTTCCCAAGCCGATTGACAAAAAAGACCCATAAAACCTAAAACCATCTGGTTCACTAGAACTTTCTCCACTTGGATCAAAAACTGCTGCTTTAACTTCTGCCTCATCAGGTGATCTATTCATGTTCTCATTCTGTTCTGCATTAATCAACTTTGGAATGTTTTCTAATAGTTCAAAGTCCTCAGGGAAACTATCCTCGGTGAATTGATTTTGAAAAAACTTCACTGCTTCATTGGCCACCTCTGTCTGTTCTTCCACCCATACTGTGTCTGAATTTTGGATCCTGTACAGCTGCGATCTCTTTCTTCTTCCATTCACATAAGCATGAAAGAACTTGGAATTTCTTTCCCCTTATTCAAACCACTTCATGCCT</gDNA_template>
            <first_frame> *  F  A  E  I  N  S  G  N  N  K  I  I  L  P  C  T  T  L  G  I  T  L  L  M  K  L  L  R  L  M  G  L  T  L  L  K  V  *  M  L  S  F  L  G  I  R  T  G  F  V  *  V  T  D  L  D  D  S  C  L  P  L  S  P  P  P  P  P  P  K  K  K  H  A  Q  L  *  Y  P  R  *  *  F  P  K  P  I  D  K  K  D  P  *  N  L  K  P  S  G  S  L  E  L  S  P  L  G  S  K  T  A  A  L  T  S  A  S  S  G  D  L  F  M  F  S  F  C  S  A  L  I  N  F  G  M  F  S  N  S  S  K  S  S  G  K  L  S  S  V  N  *  F  *  K  N  F  T  A  S  L  A  T  S  V  C  S  S  T  H  T  V  S  E  F  W  I  L  Y  S  C  D  L  F  L  L  P  F  T  *  A  *  K  N  L  E  F  L  S  P  Y  S  N  H  F  M  P </first_frame>
            <second_frame>  D  L  L  K  S  T  R  A  I  T  K  S  F  F  H  A  Q  L  *  E  S  L  C  *  *  S  C  *  G  *  W  V  *  H  Y  *  R  S  R  C  Y  L  S  *  V  S  E  P  D  L  Y  E  *  Q  I  W  M  I  P  V  S  P  S  P  P  P  P  P  P  Q  K  K  S  M  H  N  Y  D  I  L  V  N  N  F  P  S  R  L  T  K  K  T  H  K  T  *  N  H  L  V  H  *  N  F  L  H  L  D  Q  K  L  L  L  *  L  L  P  H  Q  V  I  Y  S  C  S  H  S  V  L  H  *  S  T  L  E  C  F  L  I  V  Q  S  P  Q  G  N  Y  P  R  *  I  D  F  E  K  T  S  L  L  H  W  P  P  L  S  V  L  P  P  I  L  C  L  N  F  G  S  C  T  A  A  I  S  F  F  F  H  S  H  K  H  E  R  T  W  N  F  F  P  L  I  Q  T  T  S  C   </second_frame>
            <third_frame>   I  C  *  N  Q  L  G  Q  *  Q  N  H  S  S  M  H  N  S  R  N  H  F  V  N  E  V  A  K  A  D  G  S  D  I  I  E  G  L  D  V  I  F  L  R  Y  Q  N  R  I  C  M  S  N  R  S  G  *  F  L  S  P  P  L  P  P  P  P  P  P  K  K  K  A  C  T  T  M  I  S  S  L  I  I  S  Q  A  D  *  Q  K  R  P  I  K  P  K  T  I  W  F  T  R  T  F  S  T  W  I  K  N  C  C  F  N  F  C  L  I  R  *  S  I  H  V  L  I  L  F  C  I  N  Q  L  W  N  V  F  *  *  F  K  V  L  R  E  T  I  L  G  E  L  I  L  K  K  L  H  C  F  I  G  H  L  C  L  F  F  H  P  Y  C  V  *  I  L  D  P  V  Q  L  R  S  L  S  S  S  I  H  I  S  M  K  E  L  G  I  S  F  P  L  F  K  P  L  H  A  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLm0100O21.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 170 chains have been computed
$ 
$ memory statistics:
$ 652312 bytes spliced alignments in total
$ 111 spliced alignments have been stored
$ 5876 bytes was the average size of a spliced alignment
$ 35848 bytes predicted gene locations in total
$ 24 predicted gene locations have been stored
$ 1493 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 193 backtrace matrices have been allocated
$ 
$ date finished: 2009-07-29 13:45:16
-->
