<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-12-01 11:32:41"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E351886" ref_strand="+" ref_description="SGN-E351886 [cTOS-8-D9]">
      <seq>ggaaatgtgtggtttttctttgaaaaagaatataccaaccacaatgtacgaagataatgctgcatgtatagctcaattgaaaggaggatacatcaaaggagaccggacaaagcatatctcaccaaagttctttttcacgcatgatcttcaacaaaatggtgagatagaagttcaacaaattcgttcaagtgataatcttgctgatttattcacaaaggcattgccaacatcaacgtttgagaagttgagatacaagattggaatgcgccgtctccaagatatcaagtaaagttttcatcagggggagtgaaatacgcgttgtactcttttccttaactatgggtttgtcccaagttgggttttcctggtaagggttttaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="-" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="22921" stop="21944"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22621" g_stop="22243" g_length="379"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="381" r_length="381" r_score="0.947"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="-" ref_id="SGN-E351886" ref_strand="+">
        <total_alignment_score>0.947</total_alignment_score>
        <cumulative_length_of_scored_exons>379</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E351886" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22621" e_stop="22243"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAATGTGTGATTTTTCTTTGAAAAAGAATATACCAACCACAATGTACGAAGATAATGTTGCATGTATAGCTCAATTGAAAGGAGGATACATCAAAGGAGACCGAACAAAGCATATCTCACTAAA-CACTTTTTCACGCATGATCTTTAACAAAATGGTGAGATAGAAGTTCAACAAATTCGTTCAAGTGATAATCTTGCTGATTTATTCACTAAGGCATTGCCAACATCAACG-TTGAGAAGTTGAGATACAAGATTGGGATGCGCCGTCTTCGAGATATCAAGTAAAGTTTTCATCAGGGGGAGTGAAATACACGTTGTACTCTTTTCCTTAACTATGGTTTTGTCCCAAGTTGGGTTTTCCTGGTAAGGTTTTTAAC</genome_strand>
        <mrna_strand>GGAAATGTGTGGTTTTTCTTTGAAAAAGAATATACCAACCACAATGTACGAAGATAATGCTGCATGTATAGCTCAATTGAAAGGAGGATACATCAAAGGAGACCGGACAAAGCATATCTCACCAAAGTTCTTTTTCACGCATGATCTTCAACAAAATGGTGAGATAGAAGTTCAACAAATTCGTTCAAGTGATAATCTTGCTGATTTATTCACAAAGGCATTGCCAACATCAACGTTTGAGAAGTTGAGATACAAGATTGGAATGCGCCGTCTCCAAGATATCAAGTAAAGTTTTCATCAGGGGGAGTGAAATACGCGTTGTACTCTTTTCCTTAACTATGGGTTTGTCCCAAGTTGGGTTTTCCTGGTAAGGGTTTTAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E209835" ref_strand="+" ref_description="SGN-E209835 [cLEC-52-G1]">
      <seq>atttgtaataatagctgtgtatgttgatgatttgaacatcattggcactggtaaagagcttttagaagctattgagtgtctgaaaaaagaatttgaaatgaaagatctcggcaagacaaaattttgtcttggcctacagattgagaatttgtcaaatggaatacttgttcatcaatcaacgtacacagaaaagatactaaagcgtttttacatggataactcacatccattgagtactccaatggtggtaagatcgcttgacatcaatacagatccatttcgacctcaagagaatgatgaagagcttcttggtgatgaaactccttatcttagtgcgatcggggcactaatgtaccttgctaacaatactcgaccagatatctgttttgcagtaagtctactggcaagattcagttcctccccaacaaaaagacattggaatggtgttaaacacatacttcgatatcttcgagggaccatggacatgggtttattctattccaatgaatccaaatcagaactgattggttacgcagatgcagggtatttatcagatccgcataaagcccgatcacaaacaggctatttgtttacatgtggagacacggcaatatcttggcgatcaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="-" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="23627" stop="22400"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23327" g_stop="22700" g_length="628"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="628" r_length="628" r_score="0.939"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="-" ref_id="SGN-E209835" ref_strand="+">
        <total_alignment_score>0.939</total_alignment_score>
        <cumulative_length_of_scored_exons>628</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E209835" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23327" e_stop="22700"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTGTTATAATAGTTGTGTATGTTGATGATTTGAGCATCATTGGCACTCGTAAAGAGCTTTTAGAAGTTGTTGAGTGTCTGAAAAAA-AATTTGAAATGAAATATCTCGGCAAGACAAAATTTTGTCTTGGCCTACAGATTGAGAATTTGTCAAATAGAATACTTGTTCATTAATCAACATACACAGAAAAGATACTAAAGCGTTTTTACATGGATAACTCACATCCATTGAGTACTCCAACGGTGCTAAGATCGCTTGACATCAATACAGATCCATTTCGACCTCAAAAGAATGATGAAGAGCTTCTTGGTGATGAAACTCCTTATCTTAGTGCGATTGAGGCACTAATGTACCTTGCTAACAGTACTCGACCAGATATCTGTTTTGCAGTAAGTCTACTAGCAAGATTCAGTTCCTCCCCAACAAAAAGACATTGGAATGGTGTTAAACACATACTTCGATATCTTCGAGGGACCATGAACATGGATTTATTCTATTCCAATGAGTCCAAGTCAGAACTGATTGATTTACGCAGATGCAGGGTATTTATTTGATTCGTATAAAGCTCGATCACAAATATGCTATTTGCTTACATGTGGAGACACAACCATATTTTGGTGATCAATG</genome_strand>
        <mrna_strand>ATTTGTAATAATAGCTGTGTATGTTGATGATTTGAACATCATTGGCACTGGTAAAGAGCTTTTAGAAGCTATTGAGTGTCTGAAAAAAGAATTTGAAATGAAAGATCTCGGCAAGACAAAATTTTGTCTTGGCCTACAGATTGAGAATTTGTCAAATGGAATACTTGTTCATCAATCAACGTACACAGAAAAGATACTAAAGCGTTTTTACATGGATAACTCACATCCATTGAGTACTCCAATGGTGGTAAGATCGCTTGACATCAATACAGATCCATTTCGACCTCAAGAGAATGATGAAGAGCTTCTTGGTGATGAAACTCCTTATCTTAGTGCGATCGGGGCACTAATGTACCTTGCTAACAATACTCGACCAGATATCTGTTTTGCAGTAAGTCTACTGGCAAGATTCAGTTCCTCCCCAACAAAAAGACATTGGAATGGTGTTAAACACATACTTCGATATCTTCGAGGGACCATGGACATGGGTTTATTCTATTCCAATGAATCCAAATCAGAACTGATTG-GTTACGCAGATGCAGGGTATTTATCAGATCCGCATAAAGCCCGATCACAAACAGGCTATTTGTTTACATGTGGAGACACGGCAATATCTTGGCGATCAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E299938" ref_strand="+" ref_description="SGN-E299938 [cLEW-11-G21]">
      <seq>ctcgtgcccgtttagaagctattgagtgtctgaaaaaagaatttgaaatgaaagatctcggcaagacaaaattttgtcttggcctacagattgagaatttgtcaaatggaatacttgttcatcaatcaacgtacacagaaaagatactaaagcgtttttacatggataactcacatccattgagtaccccaatggtggtaagatcgcttgacatcaatacagatccatttcgacctcaagagaatgatgaagagcttcttggtgatgaaactccttatcttagtgcgatcggggcactaatgtaccttgctaaccacactcgaccagatatctgttttgcagtaagtctactggcaagattcagttcctccccaacaaaaagacattggaatggtgttaaacacatacttcgatatcttcgagggaccatggacatgggtttattctattccaatgaatccaaatcagaactgattggttacgcagatgcagggtatttatcagatcccgcataaagcccgatcacaaacaggctatttgtttacatgtggaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="-" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="23569" stop="22425"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23277" g_stop="22725" g_length="553"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="554" r_length="554" r_score="0.926"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="-" ref_id="SGN-E299938" ref_strand="+">
        <total_alignment_score>0.926</total_alignment_score>
        <cumulative_length_of_scored_exons>553</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E299938" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23277" e_stop="22725"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTAAAGAGCTTTTAGAAGTTGTTGAGTGTCTGAAAAAA-AATTTGAAATGAAATATCTCGGCAAGACAAAATTTTGTCTTGGCCTACAGATTGAGAATTTGTCAAATAGAATACTTGTTCATTAATCAACATACACAGAAAAGATACTAAAGCGTTTTTACATGGATAACTCACATCCATTGAGTACTCCAACGGTGCTAAGATCGCTTGACATCAATACAGATCCATTTCGACCTCAAAAGAATGATGAAGAGCTTCTTGGTGATGAAACTCCTTATCTTAGTGCGATTGAGGCACTAATGTACCTTGCTAACAGTACTCGACCAGATATCTGTTTTGCAGTAAGTCTACTAGCAAGATTCAGTTCCTCCCCAACAAAAAGACATTGGAATGGTGTTAAACACATACTTCGATATCTTCGAGGGACCATGAACATGGATTTATTCTATTCCAATGAGTCCAAGTCAGAACTGATTGATTTACGCAGATGCAGGGTATTTATTTGAT-TCGTATAAAGCTCGATCACAAATATGCTATTTGCTTACATGTGGAGA</genome_strand>
        <mrna_strand>CTCGTGCCCGTTTAGAAGCTATTGAGTGTCTGAAAAAAGAATTTGAAATGAAAGATCTCGGCAAGACAAAATTTTGTCTTGGCCTACAGATTGAGAATTTGTCAAATGGAATACTTGTTCATCAATCAACGTACACAGAAAAGATACTAAAGCGTTTTTACATGGATAACTCACATCCATTGAGTACCCCAATGGTGGTAAGATCGCTTGACATCAATACAGATCCATTTCGACCTCAAGAGAATGATGAAGAGCTTCTTGGTGATGAAACTCCTTATCTTAGTGCGATCGGGGCACTAATGTACCTTGCTAACCACACTCGACCAGATATCTGTTTTGCAGTAAGTCTACTGGCAAGATTCAGTTCCTCCCCAACAAAAAGACATTGGAATGGTGTTAAACACATACTTCGATATCTTCGAGGGACCATGGACATGGGTTTATTCTATTCCAATGAATCCAAATCAGAACTGATTG-GTTACGCAGATGCAGGGTATTTATCAGATCCCGCATAAAGCCCGATCACAAACAGGCTATTTGTTTACATGTGGAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E205887" ref_strand="+" ref_description="SGN-E205887 [cLEC-20-D8]">
      <seq>cgatttgtccctgcatttttattaaacggtcggggtctgaatttgtaataatagctgtgtatgttgatgatttgaacatcattggcactggtaaagagcttttagaagctattgagtgtctgaaaaaagaatttgaaatgaaagatctcggcaagacaaaattttgtcttggcctacagattgagaatttgtcaaatggaatacttgttcatcaatcaacgtacacagaaaagatactaaagcgtttttacatggataactcacatccattgagtacgccaatggtggtaagatcgcttgacatcaatacagatccatttcgacctcaagagaatgatgaagagcttcttggtgatgaaactccttatcttagtgcgatcggggcactaatgtaccttgctaacaacactcgaccagatatctgttttgcagtaagtctactggcaagattcagttcctccccaacaaaaagacattggaatggtgttaaacacatacttcgatatcttcgagggaccatggacatgggtttattctattccaatgaatccaaatcagaactgattggttacgcagatgcagggtatttatcagatccgcataaagcccgatcacaaacaggctatttgtttacatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="-" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="23667" stop="22430"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23367" g_stop="22730" g_length="638"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="638" r_length="638" r_score="0.936"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="-" ref_id="SGN-E205887" ref_strand="+">
        <total_alignment_score>0.936</total_alignment_score>
        <cumulative_length_of_scored_exons>638</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E205887" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23367" e_stop="22730"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGATTTGTCCCTGCATTTTCATTAGATGGTTGAGGACTGAATTTGTTATAATAGTTGTGTATGTTGATGATTTGAGCATCATTGGCACTCGTAAAGAGCTTTTAGAAGTTGTTGAGTGTCTGAAAAAA-AATTTGAAATGAAATATCTCGGCAAGACAAAATTTTGTCTTGGCCTACAGATTGAGAATTTGTCAAATAGAATACTTGTTCATTAATCAACATACACAGAAAAGATACTAAAGCGTTTTTACATGGATAACTCACATCCATTGAGTACTCCAACGGTGCTAAGATCGCTTGACATCAATACAGATCCATTTCGACCTCAAAAGAATGATGAAGAGCTTCTTGGTGATGAAACTCCTTATCTTAGTGCGATTGAGGCACTAATGTACCTTGCTAACAGTACTCGACCAGATATCTGTTTTGCAGTAAGTCTACTAGCAAGATTCAGTTCCTCCCCAACAAAAAGACATTGGAATGGTGTTAAACACATACTTCGATATCTTCGAGGGACCATGAACATGGATTTATTCTATTCCAATGAGTCCAAGTCAGAACTGATTGATTTACGCAGATGCAGGGTATTTATTTGATTCGTATAAAGCTCGATCACAAATATGCTATTTGCTTACATGT</genome_strand>
        <mrna_strand>CGATTTGTCCCTGCATTTTTATTAAACGGTCGGGGTCTGAATTTGTAATAATAGCTGTGTATGTTGATGATTTGAACATCATTGGCACTGGTAAAGAGCTTTTAGAAGCTATTGAGTGTCTGAAAAAAGAATTTGAAATGAAAGATCTCGGCAAGACAAAATTTTGTCTTGGCCTACAGATTGAGAATTTGTCAAATGGAATACTTGTTCATCAATCAACGTACACAGAAAAGATACTAAAGCGTTTTTACATGGATAACTCACATCCATTGAGTACGCCAATGGTGGTAAGATCGCTTGACATCAATACAGATCCATTTCGACCTCAAGAGAATGATGAAGAGCTTCTTGGTGATGAAACTCCTTATCTTAGTGCGATCGGGGCACTAATGTACCTTGCTAACAACACTCGACCAGATATCTGTTTTGCAGTAAGTCTACTGGCAAGATTCAGTTCCTCCCCAACAAAAAGACATTGGAATGGTGTTAAACACATACTTCGATATCTTCGAGGGACCATGGACATGGGTTTATTCTATTCCAATGAATCCAAATCAGAACTGATTG-GTTACGCAGATGCAGGGTATTTATCAGATCCGCATAAAGCCCGATCACAAACAGGCTATTTGTTTACATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E209830" ref_strand="+" ref_description="SGN-E209830 [cLEC-52-E1]">
      <seq>atttgtaataatagctgtgtatgttgatgatttgaacatcattggcactggtaaagagcttttagaagctattgagtgtctgaaaaaagaatttgaaatgaaagatctcggcaagacaaaattttgtcttggcctacagattgagaatttgtcaaatggaatacttgttcatcaatcaacgtacacagaaaagatactaaagcgtttttacatggataactcacatccattgagtactccaatggtggtaagatcgcttgacatcaatacagatccatttcgacctcaagagaatgatgaagagcttcttggtgatgaaactccttatcttagtgcgatcggggcactaatgtaccttgctaacaatactcgaccagatatctgttttgcagtaagtctactggcaagattcagttcctccccaacaaaaagacattggaatggtgttaaacacatacttcgatatcttcgagggaccatggacatgggtttattctattccaatgaatgcaaatcagaactgattggttacgcagatgcaaggtatttatcagatccgcataaagcccgatcaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="-" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="23627" stop="22452"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23327" g_stop="22752" g_length="576"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="576" r_length="576" r_score="0.944"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="-" ref_id="SGN-E209830" ref_strand="+">
        <total_alignment_score>0.944</total_alignment_score>
        <cumulative_length_of_scored_exons>576</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E209830" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23327" e_stop="22752"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTGTTATAATAGTTGTGTATGTTGATGATTTGAGCATCATTGGCACTCGTAAAGAGCTTTTAGAAGTTGTTGAGTGTCTGAAAAAA-AATTTGAAATGAAATATCTCGGCAAGACAAAATTTTGTCTTGGCCTACAGATTGAGAATTTGTCAAATAGAATACTTGTTCATTAATCAACATACACAGAAAAGATACTAAAGCGTTTTTACATGGATAACTCACATCCATTGAGTACTCCAACGGTGCTAAGATCGCTTGACATCAATACAGATCCATTTCGACCTCAAAAGAATGATGAAGAGCTTCTTGGTGATGAAACTCCTTATCTTAGTGCGATTGAGGCACTAATGTACCTTGCTAACAGTACTCGACCAGATATCTGTTTTGCAGTAAGTCTACTAGCAAGATTCAGTTCCTCCCCAACAAAAAGACATTGGAATGGTGTTAAACACATACTTCGATATCTTCGAGGGACCATGAACATGGATTTATTCTATTCCAATGAGTCCAAGTCAGAACTGATTGATTTACGCAGATGCAGGGTATTTATTTGATTCGTATAAAGCTCGATCACA</genome_strand>
        <mrna_strand>ATTTGTAATAATAGCTGTGTATGTTGATGATTTGAACATCATTGGCACTGGTAAAGAGCTTTTAGAAGCTATTGAGTGTCTGAAAAAAGAATTTGAAATGAAAGATCTCGGCAAGACAAAATTTTGTCTTGGCCTACAGATTGAGAATTTGTCAAATGGAATACTTGTTCATCAATCAACGTACACAGAAAAGATACTAAAGCGTTTTTACATGGATAACTCACATCCATTGAGTACTCCAATGGTGGTAAGATCGCTTGACATCAATACAGATCCATTTCGACCTCAAGAGAATGATGAAGAGCTTCTTGGTGATGAAACTCCTTATCTTAGTGCGATCGGGGCACTAATGTACCTTGCTAACAATACTCGACCAGATATCTGTTTTGCAGTAAGTCTACTGGCAAGATTCAGTTCCTCCCCAACAAAAAGACATTGGAATGGTGTTAAACACATACTTCGATATCTTCGAGGGACCATGGACATGGGTTTATTCTATTCCAATGAATGCAAATCAGAACTGATTG-GTTACGCAGATGCAAGGTATTTATCAGATCCGCATAAAGCCCGATCACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E332350" ref_strand="+" ref_description="SGN-E332350 [cTOD-17-L10]">
      <seq>ttttctaatttggttatgaaaatggcatatgtcaacacaaaattaattgagggctctggaagagcgaccttattactacctggagggacaatattaagcattgataatgcattatattgtagtaagtctcaaagaaacttattaagtttcaaagttattcgccaaaatggctatcatgttgagacggctaatgaaggaaaggttgaatacctttacattactacaattaatgttgagaagaaaattgtgcatgaaaaattacctgcattttcttctgggttgtactatacaagtataagtacagttgaatcacatgccgtagtaaacaaaaggtttactaattttaatgattttatcatttggcatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="-" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="25965" stop="24984"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25652" g_stop="25284" g_length="369"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="367" r_length="367" r_score="0.913"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="-" ref_id="SGN-E332350" ref_strand="+">
        <total_alignment_score>0.913</total_alignment_score>
        <cumulative_length_of_scored_exons>369</cumulative_length_of_scored_exons>
        <coverage percentage="1.005" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E332350" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25652" e_stop="25284"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATGAAAATGGCATATGTCAACACAATATCAGGTAGTACAAAATTAATTGAGGGCTTTGGAAGAGTGACCTTATTACTACCTGGAGGGACAATATTAAGCATTGATAATGCATTATATTGTAGTAAGCCTCAAAGAAACTTATTAAGTTTCAAAATTATTCGCCAAAATGGCTATTATGTTGAGACGACTAATGAAGGAAAGGTTGAATACCTTTACATTACTACAATTAATATAGCGAAGAAAATTGTGCATGAAAAATTACCTGCACTTTCTTCTGGGTTGTACTATACAAGTATAAGTACAGTTGAATCACATGCGGTAGTAAACAAAAAGTTTACTAATTTTAATGATTTTATCATTTGACATG</genome_strand>
        <mrna_strand>TTTTCTAATTTGGTTATGAAAATGGCATAT--GTCAACACAAAATTAATTGAGGGCTCTGGAAGAGCGACCTTATTACTACCTGGAGGGACAATATTAAGCATTGATAATGCATTATATTGTAGTAAGTCTCAAAGAAACTTATTAAGTTTCAAAGTTATTCGCCAAAATGGCTATCATGTTGAGACGGCTAATGAAGGAAAGGTTGAATACCTTTACATTACTACAATTAATGTTGAGAAGAAAATTGTGCATGAAAAATTACCTGCATTTTCTTCTGGGTTGTACTATACAAGTATAAGTACAGTTGAATCACATGCCGTAGTAAACAAAAGGTTTACTAATTTTAATGATTTTATCATTTGGCATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E689229" ref_strand="+" ref_description="SGN-E689229 [t3_tus_80_K13]">
      <seq>attttctttcttttagaattctagtaagttcttttctaacaagaattttagtaagttcttttataacacgttatcagcacgaaattgctacttgcaaaggtactatataaatatttttatttaattcacatattctctcataattttcattatgtcgaatttatccaaacttgagtttgtggcattagatatttctggaaagaattatctttcatgggtactcgatgctgagattcacttggctgctaaaggtcttgatgccactattactcagggaaatgaagcatcgagtcaagataaggcgaaggctatgattttccttcgtcatcatcttgatgagggcctgaagattgaatatctgacagtgaaagatccacttgaattgtggactgatttaaaggggagatatgaccacctaaaggcaacagtgttgccaagagctcgttatgagtggatgcatttacggtttcaagattttaagaccgtaattgaatacaactctgctgtattcaggataacctcccagttgaaattatgtggggagactataaaagatgaggacatgttggaaaagacacttactacttttcatgcctcgaatgtgatattgcagcagcaatatcgtgaaaagggttttcagaaatattctgaactaatctcatgtcttttggtggctgagcaacataatgctcttttaatgaaaaatcatgaagctcgtcccactggagctgctccattaccggaggcaaatgcggtggaagcacgtgatcaatctgaagtaaaaagaaatgatcatcggggatataataatgcacggggacgtggcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="-" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="27377" stop="26009"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="27069" g_stop="26309" g_length="761"/>
          <reference_exon_boundary r_type="cDNA" r_start="65" r_stop="828" r_length="764" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="-" ref_id="SGN-E689229" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>761</cumulative_length_of_scored_exons>
        <coverage percentage="0.919" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E689229" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="27069" e_stop="26309"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACACGTTATCAGCACGAAGTTGCTACTTGCAAAGGTATTATATAAATATTTTTATTTAATTCACATATTCTCTCATAA-TTTCATTATGTCGAATTTATCCAAACTTGAGTTTGTGGCATTAGATATTTCTAGAAAGAATTATCTTGCATAGATACTCGATGCTGAGATTCACTTGGCTGCTAAAGGTCTTGATGCCACTATTACTCAGGGAAATGAAGCATCGAGTCAAGATAAGGCGAAGGCTATGATTTTCCTTCGTCATCATCTTGACGAGGGTCTGAAGATTGAATATCTAACGGTAAAAGATCCACTTGAATTGTGGACTGATTTAAA-GGGAGATATGACCACCTAAAGGCAACAGTGTTGCCAAGAGCTCGTTATGAGCGGATGCATTTATGGTTTCAAGATTTTAAGACCGTAATTGAATACAACTCTGCTGTATTCAGGATAACCTCCCAGATGAAATTATGAGGGGAGACTATAAAAGATGAGGACATGTTGGAAAAGACACTTACTACTTTTCATGCCTCAAATGTGATATTGCAGCAGCAATATCGTGAAAGGGGTTTTCAGAAATATTCTGAACTAGTCTCATGTCTTTTGGTGGCTGAGCAACATAATGTTCTTTTAATGAAAAATCATGAAGCTCGTCCCACTGGAGCTGCTTCATTACCGGAGGCAAATGTGATGGGAGCACGTGATCAATCTGAAATAAAAAGAGATGATCATCGGGGCTATAATAATGCAC-GGGAGGTGACAA</genome_strand>
        <mrna_strand>AACACGTTATCAGCACGAAATTGCTACTTGCAAAGGTACTATATAAATATTTTTATTTAATTCACATATTCTCTCATAATTTTCATTATGTCGAATTTATCCAAACTTGAGTTTGTGGCATTAGATATTTCTGGAAAGAATTATCTTTCATGGGTACTCGATGCTGAGATTCACTTGGCTGCTAAAGGTCTTGATGCCACTATTACTCAGGGAAATGAAGCATCGAGTCAAGATAAGGCGAAGGCTATGATTTTCCTTCGTCATCATCTTGATGAGGGCCTGAAGATTGAATATCTGACAGTGAAAGATCCACTTGAATTGTGGACTGATTTAAAGGGGAGATATGACCACCTAAAGGCAACAGTGTTGCCAAGAGCTCGTTATGAGTGGATGCATTTACGGTTTCAAGATTTTAAGACCGTAATTGAATACAACTCTGCTGTATTCAGGATAACCTCCCAGTTGAAATTATGTGGGGAGACTATAAAAGATGAGGACATGTTGGAAAAGACACTTACTACTTTTCATGCCTCGAATGTGATATTGCAGCAGCAATATCGTGAAAAGGGTTTTCAGAAATATTCTGAACTAATCTCATGTCTTTTGGTGGCTGAGCAACATAATGCTCTTTTAATGAAAAATCATGAAGCTCGTCCCACTGGAGCTGCTCCATTACCGGAGGCAAATGCGGTGGAAGCACGTGATCAATCTGAAGTAAAAAGAAATGATCATCGGGGATATAATAATGCACGGGGACGTGGCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E603154" ref_strand="+" ref_description="SGN-E603154 [56236]">
      <seq>gccagccaggattttgggtattttcaggtgatcaaccatgggatttcagaaacattattggaagagacaatagatgtgttgaaagaattttttaacatgccagctaaagagaaagcaaagtactactcagttgacccaaatagcaaatgcaaactctacacaagcactattaattattccaatgaagataaacattattggagagatgctttagcacatcattgtcatcctctccaacattacttgcctttttggccagaaaaaccaactcgtta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="+" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="28006" stop="28858"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28023" g_stop="28049" g_length="27"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="27" r_length="27" r_score="0.889"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28050" i_stop="28307" i_length="258">
            <donor d_prob="0.985" d_score="0.00"/>
            <acceptor a_prob="0.996" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28308" g_stop="28558" g_length="251"/>
          <reference_exon_boundary r_type="cDNA" r_start="28" r_stop="275" r_length="248" r_score="0.904"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="+" ref_id="SGN-E603154" ref_strand="+">
        <total_alignment_score>0.904</total_alignment_score>
        <cumulative_length_of_scored_exons>278</cumulative_length_of_scored_exons>
        <coverage percentage="1.011" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E603154" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28023" e_stop="28049"/>
          <exon e_start="28308" e_stop="28558"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCAGTCAGGATTTCGGCTATTTTCAGGTTTTCTAATTTTTTTTTTCTCGAATTTAATTTTTATACATTAACGGTATAAGAAAATTATCATGTTTACAAGCCAGTAATCGTCCACTATAAGTTACTTGAAAAATATATTTGACATGTTATCTGTTATTGCACAAATGTAAAGTATATTTTTGTTGATTTTATGAAAAATATGTGTTATCATACCTAATAACACATGTTACCTATTATAACGGGTTCAATTATACTGATTATATTTGTTAATTTTATGAAAAATAGGTGATCAACCATGGGATTTCAGAAAAATTATTGGAAGAGACCATAGGTGTATTAAAAGAATTTTTTAACATGCCAGCTGAAGAGAAAGCAAAGTACTACTACACAGGTGACCCAAATAGCAAATGCAAACTCTACACAAGCAGTTATAATTATCAAAATGAAGATAAACATTGTTGGAGGGATACGTTAGCACATCATTGTCATCCTCTCCAAGATAACTTGCCTTTTTGGCCAGAAAAACCTACTCATTA</genome_strand>
        <mrna_strand>GCCAGCCAGGATTTTGGGTATTTTCAG..................................................................................................................................................................................................................................................................GTGATCAACCATGGGATTTCAGAAACATTATTGGAAGAGACAATAGATGTGTTGAAAGAATTTTTTAACATGCCAGCTAAAGAGAAAGCAAAGTACTACT---CAGTTGACCCAAATAGCAAATGCAAACTCTACACAAGCACTATTAATTATTCCAATGAAGATAAACATTATTGGAGAGATGCTTTAGCACATCATTGTCATCCTCTCCAACATTACTTGCCTTTTTGGCCAGAAAAACCAACTCGTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E548814" ref_strand="+" ref_description="SGN-E548814 [TUS-64-K16](-)">
      <seq>aatagcaaatgcaaactctacacaagcactatgaattactccaatgaagataaacattattggagagatgctttagcacatcattgtcatcctattcaacatttcttgcctttttggccagaaaaaccaactcgttatcgagaagtgattagtgcatattcaattgaaacaaggaagctaatcacaaagatttcagatgtgattagtgaaggattaggacttgaaaaggggtattttggaggtgaattaagcaaagttcaaatgctattagtgaactgttatcctccatgtcctgatccaaatttggcacttggaatgcatagccattgtgacccaaatttgttcacaattttgcttcaagacaatgtttgtggcttacaaattttcaaggatggaaaatggattgctgtggaaccaattcctaatgcatttgtggtcatcattggttgtcaattacagattatcagtaacaataagctaaaaagtgtgattcatcgagcagtgacaaattcaaaagaaactcgaatttgtgttggtaattttgtgattccttcttcagattgtcacattgaacctgcaagtgatttggttaatggaacaacaaatattccagcatacaagccatatcagtacaaagagttcttgcacacctatgcaacaaaccatggagattttgaagctgtacttcagtcttacaagctctaattaaaaagcttaattatgtatgtgtgtgactatatatatcgtttgcaataaaatatatttctacaccaatgtatataatataataaataaacatattttaactccaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="+" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="28122" stop="31922"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28422" g_stop="28561" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="140" r_length="140" r_score="0.864"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28562" i_stop="29147" i_length="586">
            <donor d_prob="0.652" d_score="0.86"/>
            <acceptor a_prob="0.918" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29148" g_stop="29469" g_length="322"/>
          <reference_exon_boundary r_type="cDNA" r_start="141" r_stop="459" r_length="319" r_score="0.941"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="29470" i_stop="31305" i_length="1836">
            <donor d_prob="0.992" d_score="0.94"/>
            <acceptor a_prob="0.989" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31306" g_stop="31593" g_length="288"/>
          <reference_exon_boundary r_type="cDNA" r_start="460" r_stop="744" r_length="285" r_score="0.899"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="811" polyA_stop="824"/>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="+" ref_id="SGN-E548814" ref_strand="+">
        <total_alignment_score>0.911</total_alignment_score>
        <cumulative_length_of_scored_exons>750</cumulative_length_of_scored_exons>
        <coverage percentage="0.910" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E548814" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28422" e_stop="28561"/>
          <exon e_start="29148" e_stop="29469"/>
          <exon e_start="31306" e_stop="31593"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATAGCAAATGCAAACTCTACACAAGCAGTTATAATTATCAAAATGAAGATAAACATTGTTGGAGGGATACGTTAGCACATCATTGTCATCCTCTCCAAGATAACTTGCCTTTTTGGCCAGAAAAACCTACTCATTATCGGTATTTCTTTCTGGATAATTGAGAGTCTGAACTTTCTATCTGAAACATCACCTAATGATTAGCGGAACACACCTAGACGTTATAAATGAACTAGACCAAATGATTGTAGATGCATTTGTCCATCTAATATTCCTCCACATGACCATATATAATTAACGACTCTATTTGCAAACACGTTAATTTTTTTAAATATATTTTTAATTGATTATTGTGAAATCCTAAACTCTTCCTTTTTAAATCGGAGATAGCGATATCACGATATAGACGAGTCCACGACTAAAAAGGTGAAGAAGAAGATGATAGATTTCACGGTTGGAATAAATTAATTTATATGATAACAGTTTTAACCTTTAACCTGAAATTAATTTATTTGCCTTTGCCATGGTGAAACGATTTTACCACGTGGAGTGGTACGTGACAAAAAAAAATTAACTAAAAGAGAGAATCTACACACATCATCATGTCTGTTTCGCTAACTGTTGGGTGATATTTTAGATATGAAACTGAATAGTTCAAGTAGCAATAACGCAGATGTTACTTTTTGCTATTATTATATTTAAATTTGTTTCCTAATTACCAATTTCAGAGAAGTTATTAGTGCATATTCAATTGAAACAAGGAAACTAATCACAAAGATTTTAGATGTGATTAGTGAAGGATTAGGACTTGAAAAGGGGTATTTTGGAGGTGAATTAAGCAAAGTTCAAATGCTATCAGCTAATTATTATCCTCCATGTCCTGACCCAAATTTGGCACTTGGAATGCATAGCCATTGTGACCCAAATTTGCTCACAATTTTGCTTCAAGACAGTCATGTTTATGGCTTACAAATCTTCAAGAATGGAAAATGGATTGCTGTTGAACCTATTCCTAATGCATTTGTGGTCATCATTGGTTGCCAATTACAGGTAAATCATATATGTTGGTGTATATATATATATACTGTTACAATTTTTAGATTATGCATGAAAAAAGAGTTCGGAGCCTAAAGGTATAAAATATTAACAAAAATTCTAAAACGGTATATAAAATTTTATATTAATCAAAACGGCAAAATCGCTAGAACAACAGCAATTTTCTCTACCGGAAAAAGCAAAATCGCTGCAGTAAAAAAAATTCAAATTGCTACCTAGGGCAGCAATTTCCATTTATTTAAAAAAAAAAATATTTTTTTAGGCAGCGATTTTCTTTAAAAAACAATTTTTAAAGTGAAAATCGCTGTCTAGGCAGCGATTTTCTAAAAAAAAATTATAAGGAAATGAATTTTCTAAAAAAGTAAAAATTAAAAAAAATGAAAATCACTGCCTAGGCAACGATTTCCTTTTAAAAAAAACAACGATTTTCTAAAAAAAATGGATAATCTCTCATCTGCGTATAGAAAACAAAAATATTTTTAAAAAAATCTATAGTAAAATAAATAATATGAAAAAGGTAGTAAACTCACCAATGAAACTAATGATTAGTGATAAAAAAATATGAAGATTAACATTATATGACATTGTGGAATTATTAATAAAATAGGTTAAAAAGTTAGAATTCTATTTGAATTCAAACATCATTTAAATTTAAATTCAATATAATATCTTTTTTTAGAAAGAAAATATTTTTGTTACCTTACTTATTCTTAATTTTTTTTAGAAAGAAAATATTTTTGTTACCTTACTTATTTTTAATTTTTTTTAAAACAATGCATATTTTCTTATAAGCTATATATTTGAATTTCAAAAAAAAAATTGAAAATCAATAAAATTTGTTTTTCCTACGATTTTCTTTTTAAAAAAATAATTTTTTTTAGAAAATCGCTGCCTAGATAGCGATTTCCATTTTTTTAAAAAAAGGAAGCGATTTTCTAAAAAAAAATTGAAAATCGCTGCCTATGTAGCGATTTGAATTTCTTTTTTAAAAAATAAATTAGCAGCGATTTTGCTTTTTCTAGTGGAGGAAATCGTTGTTGTTCCAGCGATTTTGTCGTTTTGGTTAATATAAATTTTATTTACCGTTTTAAAATTTTTGTTAATATTTTATACCCTTTAGGCTCCGGACTCGTGAAAAATACGCAAGTACCTCATAAAAGCAAAATAATTACTAGCATATACTCCTTTACATTCGTATTTCACCAAATAATTACATTACATATCCCTAACTAATTTCGCCTAACTGATATTAAATCAGTATCTTATATTGTATTGGTATAATTAAGACTGATAATTTCGCTTAACTAATACTAAATCAATATCATTTACTGTATTGGTATCATAAAGGCTGATAATTTCGCTGAATTGATATTAAATCAGTATATATATACTGTATTAAAATCATTAAGGTTTCCGTTTAAGAGATTACGCATTGGTCAATAATACTACAAGAATACACATATATACTCTTATAGTATCCTAACTAATAAGTAATTTCTGAACAAGAAATCATAATGATACCAATACAGTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATACTGATTAATGAGTATCAGTTAAGCGAAGTTATCAAGCTTAATGATATCAATATAGTATATGATACCGATTTAGTATCAGTTAAGCGAAAATTATCACCCTTAAATAAATAGGGTATGAACTATAACTATTTACGAGAGAATGAATATTTCAGGAATTACTTTGACTTTTAATATAAACTTGCAATTATTTTGGATTTTATCGCTCGTTTAATCTTAATTTTTCAGATTATCAGTAACGATAGGCTAAAAAGTGTGATTCATCGAGCAGTGACAAATTCAAAAGAAACTAGAATTTGTGTGGGTAATTTTGTGATTCCTTCTTCAGATTGTCACATTGAACCTGCAAGTGAATTGGTTAAAAAAACAACAAATATTGCAGCATACAAATCTTATCAGTACAAAGAGTTCTTGCACGCCTATGAAATAAAACATGGAGATTTTGAAGCTCTACTTCAATCTTATAAGCTCTAATTTATAAACTTAATTATGTATGTGTCATGTGTGTCACTATAT</genome_strand>
        <mrna_strand>AATAGCAAATGCAAACTCTACACAAGCACTATGAATTACTCCAATGAAGATAAACATTATTGGAGAGATGCTTTAGCACATCATTGTCATCCTATTCAACATTTCTTGCCTTTTTGGCCAGAAAAACCAACTCGTTATCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAGTGATTAGTGCATATTCAATTGAAACAAGGAAGCTAATCACAAAGATTTCAGATGTGATTAGTGAAGGATTAGGACTTGAAAAGGGGTATTTTGGAGGTGAATTAAGCAAAGTTCAAATGCTATTAGTGAACTGTTATCCTCCATGTCCTGATCCAAATTTGGCACTTGGAATGCATAGCCATTGTGACCCAAATTTGTTCACAATTTTGCTTCAAGACA---ATGTTTGTGGCTTACAAATTTTCAAGGATGGAAAATGGATTGCTGTGGAACCAATTCCTAATGCATTTGTGGTCATCATTGGTTGTCAATTACAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATCAGTAACAATAAGCTAAAAAGTGTGATTCATCGAGCAGTGACAAATTCAAAAGAAACTCGAATTTGTGTTGGTAATTTTGTGATTCCTTCTTCAGATTGTCACATTGAACCTGCAAGTGATTTGGTTAATGGAACAACAAATATTCCAGCATACAAGCCATATCAGTACAAAGAGTTCTTGCACACCTATGCAACAAACCATGGAGATTTTGAAGCTGTACTTCAGTCTTACAAGCTCTAATTAAAAAGCTTAATTATGTATGTGT-GTGACTAT-A-TATAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E425097" ref_strand="-" ref_description="SGN-E425097 [STM-44-F17]">
      <seq>atcatcaggtctgttcgctaactactgggtgataatttaggtatgaaactgaatagttcaagtaacaataacgtagatgttactttttcccattattatatttaaatttgtttcntaattacaaatttcagagaagttattagtgcatattcaattgaaacaaggaagctaagcacaaagattttagatgtgattagtgaaggattaggacttgaaaaggggtattttggaggtgaattaagcaaagttcaaatgctatcagctaactattatcctccatgtcctgacccaaatttagcacttggaatgcatagccattgtgacccaaatttgttcacaattttgcttcaagacagtcatgtttatggcttacaaatcttcaaggatggaaaatggattgctgttgaacctattcctaatgcatttgtggtcatcattggttgccaattacagattatcagtaacgataggctaaaaagtgtggttcatcgagcagtgacaaattcaaaagaaactcgaatttgtgtgggtaattttgtgattccttcttcagattgtcacattgaacctgcaagtgatttggttaaaaatacaacaaatattccagcgtacaaaccttatcagtacaaagagttcttgcacacctatgcaataaaccatggagattttgaagctgtacttcagtcttacaagctataatttataagcttaattatgtgtcatgtgtgtgactatatatatcgtttggaataaaaatatatttctacacaaaaaaaaagatttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="+" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="28716" stop="31922"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29016" g_stop="29469" g_length="454"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="453" r_length="453" r_score="0.960"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29470" i_stop="31305" i_length="1836">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31306" g_stop="31593" g_length="288"/>
          <reference_exon_boundary r_type="cDNA" r_start="454" r_stop="737" r_length="284" r_score="0.931"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="770" polyA_stop="780"/>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="+" ref_id="SGN-E425097" ref_strand="-">
        <total_alignment_score>0.949</total_alignment_score>
        <cumulative_length_of_scored_exons>742</cumulative_length_of_scored_exons>
        <coverage percentage="0.946" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E425097" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="29016" e_stop="29469"/>
          <exon e_start="31306" e_stop="31593"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCATCATGTCTGTTTCGCTAACTGTTGGGTGATATTTTAGATATGAAACTGAATAGTTCAAGTAGCAATAACGCAGATGTTACTTTTTGCTATTATTATATTTAAATTTGTTTCCTAATTACCAATTTCAGAGAAGTTATTAGTGCATATTCAATTGAAACAAGGAAACTAATCACAAAGATTTTAGATGTGATTAGTGAAGGATTAGGACTTGAAAAGGGGTATTTTGGAGGTGAATTAAGCAAAGTTCAAATGCTATCAGCTAATTATTATCCTCCATGTCCTGACCCAAATTTGGCACTTGGAATGCATAGCCATTGTGACCCAAATTTGCTCACAATTTTGCTTCAAGACAGTCATGTTTATGGCTTACAAATCTTCAAGAATGGAAAATGGATTGCTGTTGAACCTATTCCTAATGCATTTGTGGTCATCATTGGTTGCCAATTACAGGTAAATCATATATGTTGGTGTATATATATATATACTGTTACAATTTTTAGATTATGCATGAAAAAAGAGTTCGGAGCCTAAAGGTATAAAATATTAACAAAAATTCTAAAACGGTATATAAAATTTTATATTAATCAAAACGGCAAAATCGCTAGAACAACAGCAATTTTCTCTACCGGAAAAAGCAAAATCGCTGCAGTAAAAAAAATTCAAATTGCTACCTAGGGCAGCAATTTCCATTTATTTAAAAAAAAAAATATTTTTTTAGGCAGCGATTTTCTTTAAAAAACAATTTTTAAAGTGAAAATCGCTGTCTAGGCAGCGATTTTCTAAAAAAAAATTATAAGGAAATGAATTTTCTAAAAAAGTAAAAATTAAAAAAAATGAAAATCACTGCCTAGGCAACGATTTCCTTTTAAAAAAAACAACGATTTTCTAAAAAAAATGGATAATCTCTCATCTGCGTATAGAAAACAAAAATATTTTTAAAAAAATCTATAGTAAAATAAATAATATGAAAAAGGTAGTAAACTCACCAATGAAACTAATGATTAGTGATAAAAAAATATGAAGATTAACATTATATGACATTGTGGAATTATTAATAAAATAGGTTAAAAAGTTAGAATTCTATTTGAATTCAAACATCATTTAAATTTAAATTCAATATAATATCTTTTTTTAGAAAGAAAATATTTTTGTTACCTTACTTATTCTTAATTTTTTTTAGAAAGAAAATATTTTTGTTACCTTACTTATTTTTAATTTTTTTTAAAACAATGCATATTTTCTTATAAGCTATATATTTGAATTTCAAAAAAAAAATTGAAAATCAATAAAATTTGTTTTTCCTACGATTTTCTTTTTAAAAAAATAATTTTTTTTAGAAAATCGCTGCCTAGATAGCGATTTCCATTTTTTTAAAAAAAGGAAGCGATTTTCTAAAAAAAAATTGAAAATCGCTGCCTATGTAGCGATTTGAATTTCTTTTTTAAAAAATAAATTAGCAGCGATTTTGCTTTTTCTAGTGGAGGAAATCGTTGTTGTTCCAGCGATTTTGTCGTTTTGGTTAATATAAATTTTATTTACCGTTTTAAAATTTTTGTTAATATTTTATACCCTTTAGGCTCCGGACTCGTGAAAAATACGCAAGTACCTCATAAAAGCAAAATAATTACTAGCATATACTCCTTTACATTCGTATTTCACCAAATAATTACATTACATATCCCTAACTAATTTCGCCTAACTGATATTAAATCAGTATCTTATATTGTATTGGTATAATTAAGACTGATAATTTCGCTTAACTAATACTAAATCAATATCATTTACTGTATTGGTATCATAAAGGCTGATAATTTCGCTGAATTGATATTAAATCAGTATATATATACTGTATTAAAATCATTAAGGTTTCCGTTTAAGAGATTACGCATTGGTCAATAATACTACAAGAATACACATATATACTCTTATAGTATCCTAACTAATAAGTAATTTCTGAACAAGAAATCATAATGATACCAATACAGTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATACTGATTAATGAGTATCAGTTAAGCGAAGTTATCAAGCTTAATGATATCAATATAGTATATGATACCGATTTAGTATCAGTTAAGCGAAAATTATCACCCTTAAATAAATAGGGTATGAACTATAACTATTTACGAGAGAATGAATATTTCAGGAATTACTTTGACTTTTAATATAAACTTGCAATTATTTTGGATTTTATCGCTCGTTTAATCTTAATTTTTCAGATTATCAGTAACGATAGGCTAAAAAGTGTGATTCATCGAGCAGTGACAAATTCAAAAGAAACTAGAATTTGTGTGGGTAATTTTGTGATTCCTTCTTCAGATTGTCACATTGAACCTGCAAGTGAATTGGTTAAAAAAACAACAAATATTGCAGCATACAAATCTTATCAGTACAAAGAGTTCTTGCACGCCTATGAAATAAAACATGGAGATTTTGAAGCTCTACTTCAATCTTATAAGCTCTAATTTATAAACTTAATTATGTATGTGTCATGTGTGTCACTATAT</genome_strand>
        <mrna_strand>ATCATCAGGTCTG-TTCGCTAACTACTGGGTGATAATTTAGGTATGAAACTGAATAGTTCAAGTAACAATAACGTAGATGTTACTTTTTCCCATTATTATATTTAAATTTGTTTCNTAATTACAAATTTCAGAGAAGTTATTAGTGCATATTCAATTGAAACAAGGAAGCTAAGCACAAAGATTTTAGATGTGATTAGTGAAGGATTAGGACTTGAAAAGGGGTATTTTGGAGGTGAATTAAGCAAAGTTCAAATGCTATCAGCTAACTATTATCCTCCATGTCCTGACCCAAATTTAGCACTTGGAATGCATAGCCATTGTGACCCAAATTTGTTCACAATTTTGCTTCAAGACAGTCATGTTTATGGCTTACAAATCTTCAAGGATGGAAAATGGATTGCTGTTGAACCTATTCCTAATGCATTTGTGGTCATCATTGGTTGCCAATTACAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATCAGTAACGATAGGCTAAAAAGTGTGGTTCATCGAGCAGTGACAAATTCAAAAGAAACTCGAATTTGTGTGGGTAATTTTGTGATTCCTTCTTCAGATTGTCACATTGAACCTGCAAGTGATTTGGTTAAAAATACAACAAATATTCCAGCGTACAAACCTTATCAGTACAAAGAGTTCTTGCACACCTATGCAATAAACCATGGAGATTTTGAAGCTGTACTTCAGTCTTACAAGCTATAATTTATAAGCTT-A--AT-TATGTGTCATGTGTGTGACTATAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E210280" ref_strand="+" ref_description="SGN-E210280 [cLEC-35-M5]">
      <seq>caaaatgcccttgaccttgcttacctgtggcaacgtcgcgctaacacgtgggacaatgacctattcatgagaatgatcattgacgtagtcaatagaactacacgtacctcggagaaaaccattagggtttccttttttactctatatcttggagactcgaacagactcctctcacttctcaaccagagtttcccagagctagggttagaacgaaaggattgcatcgagatgtcttggattgaatccgtgctttactatacaaattccccaattacccctattgatgcttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="-" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="35969" stop="35080"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="35669" g_stop="35380" g_length="290"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="290" r_length="290" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="-" ref_id="SGN-E210280" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>290</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E210280" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="35669" e_stop="35380"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAATGCCCTTGACCTTGCTTACCTGTGGCAACGTCGCGCTAACACGTGGGACAATGACCTATTCATGAGAATGATCATTGACGTAGTCAATAGAACTACACGTACCTCGGAGAAAACCATTAGGGTTTCCTTTTTTACTCTATATCTTGGAGACTCGAACAGACTCCTCTCACTTCTCAACCAGAGTTTCCCAGAGCTAGGGTTAGAACGAAAGGATTGCATCGAGATGTCTTGGATCGAATCCGTGCTTTACTATACAAATTCCCCAATTACCCCTATTGATGCTTT</genome_strand>
        <mrna_strand>CAAAATGCCCTTGACCTTGCTTACCTGTGGCAACGTCGCGCTAACACGTGGGACAATGACCTATTCATGAGAATGATCATTGACGTAGTCAATAGAACTACACGTACCTCGGAGAAAACCATTAGGGTTTCCTTTTTTACTCTATATCTTGGAGACTCGAACAGACTCCTCTCACTTCTCAACCAGAGTTTCCCAGAGCTAGGGTTAGAACGAAAGGATTGCATCGAGATGTCTTGGATTGAATCCGTGCTTTACTATACAAATTCCCCAATTACCCCTATTGATGCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E202364" ref_strand="+" ref_description="SGN-E202364 [cLEC-6-D4]">
      <seq>tactatagaatcgcggaaaaaagcaacatttatggatttcccgcgggagtttgccctaccgtgggagttggtggacactttagtggggccggttatggtaacatgatgaggaaatacggtttaacggtcgataatatcgacgatgcaaaattaattgatgttaatggacgaatcctcgatcgtaaatcgatgggggaggatttattttgggctattacgggtggtggtggggtgagttatggagttgtattgtcgtataaaataaagttggtacgagttccaccaaaggtgaccgtttttcgagtcccgagattttatgaccaaaatgcccttgaccttgcttacctgtggcaacgtcgcgctaacacgtgggacaatgacctattcatgagaatgatcattgacgtagtcaatagaactacacgtacctcggagaaaaccattagggtttccttttttactctatatcttggagactcgaacagactcctct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="-" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="36290" stop="35198"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="35990" g_stop="35498" g_length="493"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="493" r_length="493" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="-" ref_id="SGN-E202364" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>493</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E202364" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="35990" e_stop="35498"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACTATAGAATCGCGGAAAAAAGCAACATTTATGGATTTCCCGCGGGAGTTTGCCCTACCGTCGGAGTTGGTGGACACTTTAGTGGGGCCGGTTATGGTAACATGATGAGGAAATACGGTTTAACGGTCGATAATATCGACGATGCAAAATTAATTGATGTTAATGGACGAATCCTCGATCGTAAATCGATGGGGGAGGATTTATTTTGGGCTATTACGGGTGGTGGTGGGGTGAGTTATGGAGTTGTATTGTCGTATAAAATAAAGTTGGTACGAGTTCCACCAAAGGTGACCGTTTTTCGAGTCCCGAGATTTTATGACCAAAATGCCCTTGACCTTGCTTACCTGTGGCAACGTCGCGCTAACACGTGGGACAATGACCTATTCATGAGAATGATCATTGACGTAGTCAATAGAACTACACGTACCTCGGAGAAAACCATTAGGGTTTCCTTTTTTACTCTATATCTTGGAGACTCGAACAGACTCCTCT</genome_strand>
        <mrna_strand>TACTATAGAATCGCGGAAAAAAGCAACATTTATGGATTTCCCGCGGGAGTTTGCCCTACCGTGGGAGTTGGTGGACACTTTAGTGGGGCCGGTTATGGTAACATGATGAGGAAATACGGTTTAACGGTCGATAATATCGACGATGCAAAATTAATTGATGTTAATGGACGAATCCTCGATCGTAAATCGATGGGGGAGGATTTATTTTGGGCTATTACGGGTGGTGGTGGGGTGAGTTATGGAGTTGTATTGTCGTATAAAATAAAGTTGGTACGAGTTCCACCAAAGGTGACCGTTTTTCGAGTCCCGAGATTTTATGACCAAAATGCCCTTGACCTTGCTTACCTGTGGCAACGTCGCGCTAACACGTGGGACAATGACCTATTCATGAGAATGATCATTGACGTAGTCAATAGAACTACACGTACCTCGGAGAAAACCATTAGGGTTTCCTTTTTTACTCTATATCTTGGAGACTCGAACAGACTCCTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E582127" ref_strand="+" ref_description="SGN-E582127 [7760]">
      <seq>tctggatctaatgacgaaaagtccttcacatgaaaatcaaacatttcttgaatgtcttgaaacaaattcaaacccttcttatccaatttcttcattagtattttctccaaataattcttcatttccatctgttttgcaagcttacataagaaatttaagattcaatgagtccacaactaggaaacctctcttcatactcacagctcaacatgaatctcatattcaagcatcaattatttatgcaaaatctcaaggtgtccaaatgaaaatcaggagtggagggcatgattacgagggtctttcttacgtctccgacgtaccatttttcgtcgttgacatgttcaatttccgcacgataaacataaacattgagaatgaatcggcttgggttgaagtaggtgcaaccattggtgaactttactatagaatcgcggaaaaaagcaacgtgcatggattccccgcgggagtttgtcccaccgtgggggttggtggtcactttagtggggccggttatggtaacatgatgagaaaatacggtttaacggtcgataacatcgatgatgcaaaattaatcgatgttaacggacgaatcctcgatcgtaaatccatgggggaggatttattttgggctattacgggtggtggaggggtaagttatggagttgtcttgtcggtataaaataaagttggtacgagtccac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="-" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="36696" stop="35408"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36390" g_stop="35708" g_length="683"/>
          <reference_exon_boundary r_type="cDNA" r_start="22" r_stop="701" r_length="680" r_score="0.922"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="-" ref_id="SGN-E582127" ref_strand="+">
        <total_alignment_score>0.922</total_alignment_score>
        <cumulative_length_of_scored_exons>683</cumulative_length_of_scored_exons>
        <coverage percentage="0.974" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E582127" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36390" e_stop="35708"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCTTCACATGAACATCAATTATCATTTCTTGAATGTCTTGAAGCAAATTCAAACCCTACTTATCCAATTTCTTCATTAGTATTTTCTCCAAATAATTCTTCATTTCCATCTATTTTGCAAGCTTACATAAGAAATTTAAGATTCAATGAGTCTACAACTAGGAAACCTCTCTTCATACTCACAGCTCAACATGAATCTCATATTCAAGCATCAATTGTTTGTGCAAAATCACAAGGTGTGCAAATGAAAATTAGAAGTGGAGGGCATGACTACGAGGGTCTTTCTTATGTATCCAACGTACCATTTTTCATCGTTGACATGTTCAATTTTCGATCGATAAATGTTAGTATTGACGATGAATCGGCTTGGGTTGAAGTAGGTGCAACCCTTGGCGAAGTTTACTATAGAATCGCGGAAAAAAGCAACATTTATGGATTTCCCGCGGGAGTTTGCCCTACCGTCGGAGTTGGTGGACACTTTAGTGGGGCCGGTTATGGTAACATGATGAGGAAATACGGTTTAACGGTCGATAATATCGACGATGCAAAATTAATTGATGTTAATGGACGAATCCTCGATCGTAAATCGATGGGGGAGGATTTATTTTGGGCTATTACGGGTGGTGGTGGGGTGAGTTATGGAGTTGTATTGTC-GTATAAAATAAAGTTGGTACGAGTTCCAC</genome_strand>
        <mrna_strand>TCCTTCACATGAAAATCAA--A-CATTTCTTGAATGTCTTGAAACAAATTCAAACCCTTCTTATCCAATTTCTTCATTAGTATTTTCTCCAAATAATTCTTCATTTCCATCTGTTTTGCAAGCTTACATAAGAAATTTAAGATTCAATGAGTCCACAACTAGGAAACCTCTCTTCATACTCACAGCTCAACATGAATCTCATATTCAAGCATCAATTATTTATGCAAAATCTCAAGGTGTCCAAATGAAAATCAGGAGTGGAGGGCATGATTACGAGGGTCTTTCTTACGTCTCCGACGTACCATTTTTCGTCGTTGACATGTTCAATTTCCGCACGATAAACATAAACATTGAGAATGAATCGGCTTGGGTTGAAGTAGGTGCAACCATTGGTGAACTTTACTATAGAATCGCGGAAAAAAGCAACGTGCATGGATTCCCCGCGGGAGTTTGTCCCACCGTGGGGGTTGGTGGTCACTTTAGTGGGGCCGGTTATGGTAACATGATGAGAAAATACGGTTTAACGGTCGATAACATCGATGATGCAAAATTAATCGATGTTAACGGACGAATCCTCGATCGTAAATCCATGGGGGAGGATTTATTTTGGGCTATTACGGGTGGTGGAGGGGTAAGTTATGGAGTTGTCTTGTCGGTATAAAATAAAGTTGGTACGAG-TCCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E208960" ref_strand="+" ref_description="SGN-E208960 [cLEC-38-A24]">
      <seq>gaacatcaattatcatttcttgaatgtcttgaagcaaattcaaaccctacttatccaatttcttcattagtattttctccaaataattcttcatttccatctattttgcaagcttacataagaaatttaagattcaatgagtctacaactaggaaacctctcttcatactcacagctcaacatgaatctcatattcaagcatcaattgtttgtgcaaaatcacaaggtgtgcaaatgaaaattagaagtggagggcatgactacgagggtctttcttatgtatccaacgtaccatttttcatcgttgacatgttcaattttcgatcgataaatgttagtattgacgatgaatcggcttgggttgaagtaggtgcaacccttggcgaagtttactatagaatcgcggaaaaaagcaacatttatggatttcccgcgggagtttgccctaccgtgggagttggtggacactttagtggggccggttatggtaacatgatgaggaaatacggtttaacggtcgataatatcgacgatgcaaaattaattgatgttaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="-" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="36680" stop="35525"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36380" g_stop="35825" g_length="556"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="556" r_length="556" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="-" ref_id="SGN-E208960" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>556</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E208960" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36380" e_stop="35825"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAACATCAATTATCATTTCTTGAATGTCTTGAAGCAAATTCAAACCCTACTTATCCAATTTCTTCATTAGTATTTTCTCCAAATAATTCTTCATTTCCATCTATTTTGCAAGCTTACATAAGAAATTTAAGATTCAATGAGTCTACAACTAGGAAACCTCTCTTCATACTCACAGCTCAACATGAATCTCATATTCAAGCATCAATTGTTTGTGCAAAATCACAAGGTGTGCAAATGAAAATTAGAAGTGGAGGGCATGACTACGAGGGTCTTTCTTATGTATCCAACGTACCATTTTTCATCGTTGACATGTTCAATTTTCGATCGATAAATGTTAGTATTGACGATGAATCGGCTTGGGTTGAAGTAGGTGCAACCCTTGGCGAAGTTTACTATAGAATCGCGGAAAAAAGCAACATTTATGGATTTCCCGCGGGAGTTTGCCCTACCGTCGGAGTTGGTGGACACTTTAGTGGGGCCGGTTATGGTAACATGATGAGGAAATACGGTTTAACGGTCGATAATATCGACGATGCAAAATTAATTGATGTTAATG</genome_strand>
        <mrna_strand>GAACATCAATTATCATTTCTTGAATGTCTTGAAGCAAATTCAAACCCTACTTATCCAATTTCTTCATTAGTATTTTCTCCAAATAATTCTTCATTTCCATCTATTTTGCAAGCTTACATAAGAAATTTAAGATTCAATGAGTCTACAACTAGGAAACCTCTCTTCATACTCACAGCTCAACATGAATCTCATATTCAAGCATCAATTGTTTGTGCAAAATCACAAGGTGTGCAAATGAAAATTAGAAGTGGAGGGCATGACTACGAGGGTCTTTCTTATGTATCCAACGTACCATTTTTCATCGTTGACATGTTCAATTTTCGATCGATAAATGTTAGTATTGACGATGAATCGGCTTGGGTTGAAGTAGGTGCAACCCTTGGCGAAGTTTACTATAGAATCGCGGAAAAAAGCAACATTTATGGATTTCCCGCGGGAGTTTGCCCTACCGTGGGAGTTGGTGGACACTTTAGTGGGGCCGGTTATGGTAACATGATGAGGAAATACGGTTTAACGGTCGATAATATCGACGATGCAAAATTAATTGATGTTAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E205691" ref_strand="+" ref_description="SGN-E205691 [cLEC-21-A12]">
      <seq>gatgatgaaaattccattatttccctcttgtcttattatttttcttgtttttgctacttcaataagtccttcacgtgaacatcaattatcatttcttgaatgtcttgaagcaaattcaaaccctacttatccaatttcttcattagtattttctccaaataattcttcatttccatctattttgcaagcttacataagaaatttaagattcaatgagtctacaactaggaaacctctcttcatactcacagctcaacatgaatctcatattcaagcatcaattgtttgtgcaaaatcacaaggtgtgcaaatgaaaattagaagtggagggcatgactacgagggtctttcttatgtatccaacgtaccatttttcatcgttgacatgttcaattttcgatcgataaatgttagtattgacgatgaatcggcttgggttgaagtaggtgcaacccttggcgaagtttactatagaatcgcggaaaaaagcaacatttatggatttcccgcgggagtttgccctaccgtgggagttggtggacactttagtggggccggttatggtaacatgatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="-" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="36756" stop="35582"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36456" g_stop="35882" g_length="575"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="575" r_length="575" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="-" ref_id="SGN-E205691" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>575</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E205691" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36456" e_stop="35882"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATGATGAAAATTCCATTATTTCCCTCTTGTCTTATTATTTTTCTTGTTTTTGCTACTTCAATAAGTCCTTCACATGAACATCAATTATCATTTCTTGAATGTCTTGAAGCAAATTCAAACCCTACTTATCCAATTTCTTCATTAGTATTTTCTCCAAATAATTCTTCATTTCCATCTATTTTGCAAGCTTACATAAGAAATTTAAGATTCAATGAGTCTACAACTAGGAAACCTCTCTTCATACTCACAGCTCAACATGAATCTCATATTCAAGCATCAATTGTTTGTGCAAAATCACAAGGTGTGCAAATGAAAATTAGAAGTGGAGGGCATGACTACGAGGGTCTTTCTTATGTATCCAACGTACCATTTTTCATCGTTGACATGTTCAATTTTCGATCGATAAATGTTAGTATTGACGATGAATCGGCTTGGGTTGAAGTAGGTGCAACCCTTGGCGAAGTTTACTATAGAATCGCGGAAAAAAGCAACATTTATGGATTTCCCGCGGGAGTTTGCCCTACCGTCGGAGTTGGTGGACACTTTAGTGGGGCCGGTTATGGTAACATGATGA</genome_strand>
        <mrna_strand>GATGATGAAAATTCCATTATTTCCCTCTTGTCTTATTATTTTTCTTGTTTTTGCTACTTCAATAAGTCCTTCACGTGAACATCAATTATCATTTCTTGAATGTCTTGAAGCAAATTCAAACCCTACTTATCCAATTTCTTCATTAGTATTTTCTCCAAATAATTCTTCATTTCCATCTATTTTGCAAGCTTACATAAGAAATTTAAGATTCAATGAGTCTACAACTAGGAAACCTCTCTTCATACTCACAGCTCAACATGAATCTCATATTCAAGCATCAATTGTTTGTGCAAAATCACAAGGTGTGCAAATGAAAATTAGAAGTGGAGGGCATGACTACGAGGGTCTTTCTTATGTATCCAACGTACCATTTTTCATCGTTGACATGTTCAATTTTCGATCGATAAATGTTAGTATTGACGATGAATCGGCTTGGGTTGAAGTAGGTGCAACCCTTGGCGAAGTTTACTATAGAATCGCGGAAAAAAGCAACATTTATGGATTTCCCGCGGGAGTTTGCCCTACCGTGGGAGTTGGTGGACACTTTAGTGGGGCCGGTTATGGTAACATGATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E312488" ref_strand="+" ref_description="SGN-E312488 [cLEZ-20-H1]">
      <seq>attatttccctcttgtcttattatttttcttgtttttgctacttcaataagtccttcacgtgaacatcaattatcatttcttgaatgtcttgaagcaaattcaaaccctacttatccaatttcttcattagtattttctccaaataattcttcatttccatctattttgcaagcttacataagaaatttaagattcaatgagtctacaactaggaaacctctcttcatactcacagctcaacatgaatctcatattcaagcatcaattgtttgtgcaaaatcacaaggtgtgcaaatgaaaattagaagtggagggcatgactacgagggtctttcttatgtatccaacgtaccatttttcatcgttgacatgttcaattttcgatcgataaatgttagtattgacgatgaatcggcttgggttgaagtaggtgcaacccttggcgaagtttactatagaatcgcggaaaaaagcaacatttatggatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="-" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="36741" stop="35653"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36441" g_stop="35953" g_length="489"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="489" r_length="489" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="-" ref_id="SGN-E312488" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>489</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E312488" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36441" e_stop="35953"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTATTTCCCTCTTGTCTTATTATTTTTCTTGTTTTTGCTACTTCAATAAGTCCTTCACATGAACATCAATTATCATTTCTTGAATGTCTTGAAGCAAATTCAAACCCTACTTATCCAATTTCTTCATTAGTATTTTCTCCAAATAATTCTTCATTTCCATCTATTTTGCAAGCTTACATAAGAAATTTAAGATTCAATGAGTCTACAACTAGGAAACCTCTCTTCATACTCACAGCTCAACATGAATCTCATATTCAAGCATCAATTGTTTGTGCAAAATCACAAGGTGTGCAAATGAAAATTAGAAGTGGAGGGCATGACTACGAGGGTCTTTCTTATGTATCCAACGTACCATTTTTCATCGTTGACATGTTCAATTTTCGATCGATAAATGTTAGTATTGACGATGAATCGGCTTGGGTTGAAGTAGGTGCAACCCTTGGCGAAGTTTACTATAGAATCGCGGAAAAAAGCAACATTTATGGATT</genome_strand>
        <mrna_strand>ATTATTTCCCTCTTGTCTTATTATTTTTCTTGTTTTTGCTACTTCAATAAGTCCTTCACGTGAACATCAATTATCATTTCTTGAATGTCTTGAAGCAAATTCAAACCCTACTTATCCAATTTCTTCATTAGTATTTTCTCCAAATAATTCTTCATTTCCATCTATTTTGCAAGCTTACATAAGAAATTTAAGATTCAATGAGTCTACAACTAGGAAACCTCTCTTCATACTCACAGCTCAACATGAATCTCATATTCAAGCATCAATTGTTTGTGCAAAATCACAAGGTGTGCAAATGAAAATTAGAAGTGGAGGGCATGACTACGAGGGTCTTTCTTATGTATCCAACGTACCATTTTTCATCGTTGACATGTTCAATTTTCGATCGATAAATGTTAGTATTGACGATGAATCGGCTTGGGTTGAAGTAGGTGCAACCCTTGGCGAAGTTTACTATAGAATCGCGGAAAAAAGCAACATTTATGGATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E746397" ref_strand="+" ref_description="SGN-E746397 [GI|47105565]">
      <seq>ggaggccagagggtatgaaaagttagtagccgcgcttaggttattccttaaaccctttgtgtagtagtcttcccccaaaacccaaaaccctcgcgtaccagagaatgaacagagaaggaagagttgagattgaggaagatgaagaacaaaccttcgaagaattgggacttgaccctcgtctaatccgtgctttaaccaagaaaactatcgataaaccaactcctattcagcgagttgctattcctctaatcctcgaagggaaagatgtggttgctcgagctaagactggttctggaaagacatttgcttatctccttcctttacttcacaagctttttactcagtcatcttcaacaaagaatcttgctcctactgcgttgattcttgtacctacaagggaattgtgtcaacaggtttgttcggaggcgaattcgttgattgaactatgtagagtgcaattaaggcttgtccaattgacaagttctatgtctgtttctgaattgagaactacattggcggggcctccggagatcgttatatctactcctgcttgtatacagacatgcttgtcaaatggagttattcaagggaaagctgttcaagattctctgtccattctcattctcgatgaggcagatcttcttttgtcttatggatatgaagatgatctgaaagctcttacatctcatgtaccaagacgttgccagtgccttctgatgtctgcaacctcaagttctgacgttgaaaagctgaagaagcttattttacacaatccctacatcctgactttgcctgaggtgggagaaacaaaggatgacattatcccaaaaaatgtacagcaattttatatttcttgtgctgctcgtgataagcttgtccatgtccttgccctcttgaagcttgagttggtccagaaaaaagtcttgatatttacaaattcaattgacacgagttttagactcaaactattctttgagcagtttgggatcaagtctgcagttttaaatgccgagctgcctcagagttctcgtctacacatccttgaggaatttaatgctgggctatttgattacttgattgcgactgatgaaagtcaatcagaaggaaaggaaaaagttgatgatcaaaatggcagtgagcgaaaaaaatcaaaaaaacatcgaaagcataaattggatgcagagtttggtgtagtcagagggatagacttcaaaaatgtgcatacggtgataaattatgagatgcctcaaacagctgcaggctatgtacatcgaattggacgtactggaagagcatataatactggagcatctgtctctcttgtctctgatgaagagacagaaatatttgaagagattaaatctttactgggggaaaatgaagacaaggtgtcacagtttattgctccattcccattgctgagtaaaaatgcagtagagtctttgcgttaccgagctgaggatgttggaaggagtattacaaaaattgcagtaagagaatcacgggctcaggatctgaggaatgaaattcttaattctcaaaaattgaaggctcattttcaagataatccaaaagacttagatcttctgaagcatgataagatgttaagcaagaaagcacctgccgctcacctacgtgatgtacctgactacctattagatccaacgacacaagaagctagcaagattgtgaagctggccagagctgcaatgggcaatactaatccatctcgtggcaaaggatcaaagggaaggttcaaaagaagcagagaccctcttaaaacattttcagctgaggcacctaagcgagcagggaaaggcgggatcaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="+" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="41886" stop="94110"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="42185" g_stop="42438" g_length="254"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="254" r_length="254" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="42439" i_stop="42520" i_length="82">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42521" g_stop="42679" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="255" r_stop="413" r_length="159" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42680" i_stop="42762" i_length="83">
            <donor d_prob="0.777" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="42763" g_stop="42852" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="414" r_stop="503" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="42853" i_stop="42951" i_length="99">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="42952" g_stop="43080" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="504" r_stop="632" r_length="129" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="43081" i_stop="43440" i_length="360">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.771" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="43441" g_stop="43541" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="633" r_stop="733" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="43542" i_stop="43733" i_length="192">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.932" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="43734" g_stop="43848" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="734" r_stop="848" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="43849" i_stop="44392" i_length="544">
            <donor d_prob="0.833" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="44393" g_stop="44524" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="849" r_stop="980" r_length="132" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="44525" i_stop="45379" i_length="855">
            <donor d_prob="0.896" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="45380" g_stop="45445" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="981" r_stop="1046" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="45446" i_stop="45567" i_length="122">
            <donor d_prob="0.896" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="45568" g_stop="45747" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="1047" r_stop="1226" r_length="180" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="45748" i_stop="45927" i_length="180">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="45928" g_stop="46023" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="1227" r_stop="1322" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="46024" i_stop="46399" i_length="376">
            <donor d_prob="0.865" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="46400" g_stop="46537" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="1323" r_stop="1460" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="46538" i_stop="47182" i_length="645">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="47183" g_stop="47265" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="1461" r_stop="1543" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="47266" i_stop="47945" i_length="680">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="47946" g_stop="47983" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="1544" r_stop="1581" r_length="38" r_score="1.000"/>
        </exon>
        <intron i_serial="13">
          <gDNA_intron_boundary i_start="47984" i_stop="48059" i_length="76">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="14">
          <gDNA_exon_boundary g_start="48060" g_stop="48274" g_length="215"/>
          <reference_exon_boundary r_type="cDNA" r_start="1582" r_stop="1796" r_length="215" r_score="1.000"/>
        </exon>
        <intron i_serial="14">
          <gDNA_intron_boundary i_start="48275" i_stop="48726" i_length="452">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.86"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="15">
          <gDNA_exon_boundary g_start="48727" g_stop="48775" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="1797" r_stop="1845" r_length="49" r_score="0.857"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="+" ref_id="SGN-E746397" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1845</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E746397" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="42185" e_stop="42438"/>
          <exon e_start="42521" e_stop="42679"/>
          <exon e_start="42763" e_stop="42852"/>
          <exon e_start="42952" e_stop="43080"/>
          <exon e_start="43441" e_stop="43541"/>
          <exon e_start="43734" e_stop="43848"/>
          <exon e_start="44393" e_stop="44524"/>
          <exon e_start="45380" e_stop="45445"/>
          <exon e_start="45568" e_stop="45747"/>
          <exon e_start="45928" e_stop="46023"/>
          <exon e_start="46400" e_stop="46537"/>
          <exon e_start="47183" e_stop="47265"/>
          <exon e_start="47946" e_stop="47983"/>
          <exon e_start="48060" e_stop="48274"/>
          <exon e_start="48727" e_stop="48775"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGGCCAGAGGGTATGAAAAGTTAGTAGCCGCGCTTAGGTTATTCCTTAAACCCTTTGTGTAGTAGTCTTCCCCCAAAACCCAAAACCCTCGCGTACCAGAGAATGAACAGAGAAGGAAGAGTTGAGATTGAGGAAGATGAAGAACAAACCTTCGAAGAATTGGGACTTGACCCTCGTCTAATCCGTGCTTTAACCAAGAAAACTATCGATAAACCAACTCCTATTCAGCGAGTTGCTATTCCTCTAATCCTCGTAAGTTTACAATACTTTCATTCTCTTCGCAGTTTTGTTTGTTGAGCTGATTTCATTGTCTATGGCTACTTTTTTTTTTTAGGAAGGGAAAGATGTGGTTGCTCGAGCTAAGACTGGTTCTGGAAAGACATTTGCTTATCTCCTTCCTTTACTTCACAAGCTTTTTACTCAGTCATCTTCAACAAAGAATCTTGCTCCTACTGCGTTGATTCTTGTACCTACAAGGGAATTGTGTCAACAGGTTGAAACTTTTTGCTATTATTTTGGGGTTTTATTTTGTTTTGAGTTTGTGGGTTTATTTTAATTGTGTTTGTTGTTGTTCAGGTTTGTTCGGAGGCGAATTCGTTGATTGAACTATGTAGAGTGCAATTAAGGCTTGTCCAATTGACAAGTTCTATGTCTGTTTCTGAATTGGTTGGTTTCTTTTGTTCACAATTGTTTGCTGATTATGAAGTTTTAATCTTTATGGGTATGTGATAAAGTGATCGTTTTTTATGATCTTATGGTTTTTAGAGAACTACATTGGCGGGGCCTCCGGAGATCGTTATATCTACTCCTGCTTGTATACAGACATGCTTGTCAAATGGAGTTATTCAAGGGAAAGCTGTTCAAGATTCTCTGTCCATTCTCATTCTCGATGAGGTGGGTTAGTTTATGTTACATTGTTCCTCTTAAATTCTTTTAGTGGAAAGACTTTTTGCTGATGTGGTGAGATATGTAATGAGTTGCACTGTTTAAAATCTCAAAAGTTTTACTGTAAAGGTCCGGTTTTGTATGGTGATAGTCAACGGTTCATATCCAATATTAGGTAAAACTTACTAGATACAATAGACTCTGGTATCTGGCGAGGTTTATGACCCACCTTTAGTAGTGATAGTTACTTTTTGATTTCATATCTTTTCTCTTTCATTTGTGAATTTGAATGTTTGCATTAGAATTGGATTGTGTTTGATTGTATTCACCCGAAAGGACATGAGGTTGAGAATTATGTTTCTGTATCAGGCAGATCTTCTTTTGTCTTATGGATATGAAGATGATCTGAAAGCTCTTACATCTCATGTACCAAGACGTTGCCAGTGCCTTCTGATGTCTGCAACCTCAAGGTATGCTCGCCTTACTATATTCACATATATATGTCAAGCAAATTCTTGCTGATTCTTCCACTGTCGCCTATGCTGGTTTTCTCCAGCACAAAGTTCTTGATTGTTACCATCTTACTTCCCATCTTCCCCCCCCCCCAACCCCCCACATCTCAAGGTTTGGATATGAACTTTCTTGGTCGTGTTAATATGCAGTTCTGACGTTGAAAAGCTGAAGAAGCTTATTTTACACAATCCCTACATCCTGACTTTGCCTGAGGTGGGAGAAACAAAGGATGACATTATCCCAAAAAATGTACAGCAATTTTATGTAAGTATACACCTTCAATAGAATAACTGCTTTAGTAGTCTGTCCTCTCTTCAACACTTATTCAGTGAGGGAGTTTTGGTGCCGTCTTGGTACTTTATATAAATATGTTTAATTTGATAGAGTGATCCTCATACTTTTGGTTTCTGTAATACCTGACTAAGAAGCTGTATCTTTTGTTCTAAGGTGTGAATTTAGGAGTCATCTAAAATGGTAAATTATATGTTCAATCGTCACACGCTTTTCAACCTCTTGTGATGGATAAGTGCCACATTATGACACTACCTTCTAGTAGGCAGAGGCATTTCCCAGGGCAGGACACTTTTGTTTTAGACGTCTTATTACAACAACAAATATACACCTCAACAACTGTGTATTGTTTGTGTTCTATGCTATTGTTTTCTCTTATAGTTTCGTGTCTCTAACTACCACTTCTACTGTTTGTTCAGATTTCTTATAGTTTCTTGTCTCTAACGACCACTTCTATTGTTTGTTCAGATTTCTTATAGTTTTGTGTCTCTAACAACAACTTCTATTGTTTGTTCAGATTTCTTGTGCTGCTCGTGATAAGCTTGTCCATGTCCTTGCCCTCTTGAAGCTTGAGTTGGTCCAGAAAAAAGTCTTGATATTTACAAATTCAATTGACACGAGTTTTAGACTCAAACTATTCTTTGAGCAGGTACATCCATGTACATGATGTCACTAATATCATAGGACATGTGATCAATTTATAAATGTTGTTCTATGTAAATGTCATACTTATCTTATGAATACCTCTATTAGAAGCACCAAAACATCTTTGCCACTTGAAACTTCTTTGTTCTTCTCTTATTGTTATTATAATTATTATATTATTACTTTTTTGTTTTATGAAAGCACATCTTTAGGAATTGTTGAAGTTAGTTCTGTTATACCTCCCGGTCTATGTAGATGACTAGATGATGCAGCCCATAGAGGGAGTGCTTTTTGTTTGTTTGTGCTCAATCATAGTTGAAAGTTATAGGGAGTCGTGGATCCGCTGGATGTGCAAAAGTGTAGTTTTGGCTTGTACAAAATTCAATAGCAACATGTTTGGCCAATATTCTAAAATCAGCTTATTTTGAGAAGTGCTTTTCAAGAAACTACCTTTGGTGAAAAGTCGTTTGTATTTGGTTAATCAATTTAAAAGCACTTCTGATTAGCAGCTAGTGTTTGACCAAGCTTTCAAAAAGTGCTTCTAAGTGTATTTTCTCATTCAAAAAAGTACTTTAGGTAAAAAAAATAATTTTTCTCAGCATTAGTAAAGCACTTATTTTCTCCCTAGAAGCTTGGCTAAACACCTCCATTTTTAAAGATAAGATCTTTCAGTGTTCCCAAAATCTTGGCCAAACTGGCTGCAGGTCACTATATTATCTATTTTCTATAAGGCTACATTTATGACCTGTAATCTTCTGGGTGCTTATAGGTTATTGGTCTATGTTTCCGATGCTATACTTACTGCCTGCCTGAGGTGTTCCTGATAGTATTTTTGATATCCTGGTTAATCATTTTGCAGTTTGGGATCAAGTCTGCAGTTTTAAATGCCGAGCTGCCTCAGAGTTCTCGTCTACACATCCTTGAGGTCTGTCATATGAGTGTAGAATGCCAAGAAATGCACACCTGTTGTATGGCTTTTGTTATAGTTCAACTCTTCTTGTGAAGTCTACTATTGCACTAGTCTCATAATTTTCTTCTTCTGAGCAGGAATTTAATGCTGGGCTATTTGATTACTTGATTGCGACTGATGAAAGTCAATCAGAAGGAAAGGAAAAAGTTGATGATCAAAATGGCAGTGAGCGAAAAAAATCAAAAAAACATCGAAAGCATAAATTGGATGCAGAGTTTGGTGTAGTCAGAGGGATAGACTTCAAAAATGTGCATACGGTAAGTTTGTTCTGTTCTTTATGGAATGTTGTCCTCCATTTGGCGGCTTATGTTTTTTTCTTTTATCATTTCCTGTTGAGCCATTTAGTGATAGAGGATACACAACCCAGTCTGAATAGAAGTTCTGGATTTTGCATAGACCTAATACTCCATATCCTCTTTATGTCTTATTTTGCACAGGTGATAAATTATGAGATGCCTCAAACAGCTGCAGGCTATGTACATCGAATTGGACGTACTGGAAGAGCATATAATACTGGAGCATCTGTCTCTCTTGTGAGTAGTTTGAAGACATGTCTGAGGTCATTGATATACAATTGTGATTGCTAGCATATGATTTAGTTGATTACTTATTGGATATTAGGTTATGTGTTTTAATGTTGTTTGGTTTTTAAATGTTGAACTGCTGATTCATAGAATTTCGCTCTTGGCATTAACAAATTACCCAATGTTCTTATTTCATCTACTCTCTGAATTTGTTTTTCATTTGAGAGTGGCATGACTTCGTAGATCATAGGCTGGGGAATCGGTTTTATACATCTTATCTAAAAATTACTTAAGTCTTCCTTCCCTATGAACTCTCTTCCGACGACTGTAGGAGAAAACTATGTTTTCTTTTTGCCTTTTTGACCATGTTTTTGTTTTGTTACAGGTCTCTGATGAAGAGACAGAAATATTTGAAGAGATTAAATCTTTACTGGGGGAAAATGAAGACAAGGTGTCACAGTTTATTGCTCCATTCCCATTGCTGAGTAAAAATGCAGTAGAGTCTTTGCGTTACCGAGCTGAGGTAAAACTTTCATCAATTGTATTTCTACAATAGTCATTGTGTGATAAGTTACTATTGGGAGCCTAGCAGAGTTAGGAGTGTCACCTAGTCCTAGTATAAGTTACTATTGGGAGCCTAGCCGAGTTAGGAGTGTCACCTAGTCCTAGTAGCAGTGAACTTTGTGAAGTTAAGGTTATCAAGTGAGTGTCTTACAGAGGTATATAATGCTTCCTGCTTTAACTATCTCGAGTATGTTTTTTGTGAAAAGAAACAGACAAATATTTAGATGTTACATTTAGTTGTATAGAGCGTTTAAAAAGTGAGCCTCATTGGTAATCATGAATAAATTTGAGTTGTATGTCCAAATTCACCAATCTGTAAATCAACAGATTATTAATTAGTCCATATTTTGTCAACCTCTTGATGCACAAGCATGCTTTAACTATACAAGACGATCCATGCTGTAAAATTAACTCGTGTGACTACTTTTAAGAATTTGGTTTACTGCAAGCCCATCTCATTCGCCGCCATCACCCGGACAAAAGGAAGTAAAGATATACATATATTTTTATGGAAAAGCAGTTAACTTGAACTGTATGCTGGTGCACTCCTGCCGATTTCTTTGTTTTGGGAGTCTAGATTGCTTGACTGCCATCTTTTCTGTAGGATGTTGGAAGGAGTATTACAAAAATTGCAGTAAGAGAATCACGGGCTCAGGATCTGAGGAATGAAATTCTTAATTCTCAAAAGTAAGCTACTCTGTTTATTTTTTCTTTTCTTCTTTGAATAGCTCATTTTCCTTTTTTCACTGTTCATGTATTATTGCGCTAATTTCTGACAATTACTGAGAATATAGCTCAGTTTCTGTCCAAAAATAAGTGTCATGTTTCCGTCCAATCTAGGTGTAATTGTCCTCCTCATCCCATTCTTTTTTTGATAAGGAGTTAAGGACCTTCCCATAGTTCATCACTTTAAGTAGTTTAGAAATGTGATGACAGCCTCATTGTTCTGATTCAGACATCACTCAAATAGAAGTTCTTTCAGTTAAAAGGGGATTTTTGATGGTACAATTGTTACTCACTCTCGACTGTATGATGCATATCTGCTTTAAATTAATTCAGATTTCTTTTCATGGAAATTCAAGATTTGAATGACTCAATACTTTATCAAATGATTTGAATGTCTCATAATATGTTAAAGCTGGAGTAAAACTTATACCTTTGGGAAGAAGTTACAATATTTGTCATATATTTATTTTGTAGATTAATAGTTTGCTTTCATATAGTTATTTGTTTGTTAATATTCTTCACCTATCTGTTAGGAGGCACTTTCCAAGCCTGGTTACTGATTTTATATTTTTCAATGATTGTATTTTGCTGTGCTTGACTTGTAATCTGTATTAACTACTTCTTCCGCTTGTATTATCCAGATTGAAGGCTCATTTTCAAGATAATCCAAAAGACTTAGGTAATTAGGCTGTAGTTTGTGGGATGTACTTTGAGTGAACATAGTAGGTCTCATTATATTCAAATGTTCTGGGCAGATCTTCTGAAGCATGATAAGATGTTAAGCAAGAAAGCACCTGCCGCTCACCTACGTGATGTACCTGACTACCTATTAGATCCAACGACACAAGAAGCTAGCAAGATTGTGAAGCTGGCCAGAGCTGCAATGGGCAATACTAATCCATCTCGTGGCAAAGGATCAAAGGGAAGGTTCAAAAGAAGCAGAGACCCTCTTAAAACATTTTCAGCTGAGGTATACCTCCCCAACCTCTACTTGCACTAAGCTGTATGTGTTGGTGATTTTACATTCATGTTTTGTCTGTGTACCACTAGAAATTGAACTAGCAAGTTCTACTTATTCGAGTCTTGTCAACATGATGATATGATCAAATGTCTTCCTTCTTGGTTGAGGAAGGGTAAACTTGTGGATTGTGGGGTTAGGTATTACTGTATTTCGTCTCTCTTTTTAATACTTGTCAGAGGTTATCGATGAAGTTCTGCTTATTCATATAGATATGATCTGAGATTACTTGTGTAGTCAATACGTTCCACACGATCAAACAAGGAAATACATCTTGAACAGGATGTAGGTTATCGAAGGGAATGATCATATATATGAAATACAATCCTAGATGATTGTGTTCTTGGCTTTATTATGGGCAACGTTGGTGGCTTGGTGTTTGATCTCTTCTTCTTTGATTGCAGGCACCTAAGCGAGCAGGGAAAGGCGGGATGAAAAGAAAGGTAAAAGATA</genome_strand>
        <mrna_strand>GGAGGCCAGAGGGTATGAAAAGTTAGTAGCCGCGCTTAGGTTATTCCTTAAACCCTTTGTGTAGTAGTCTTCCCCCAAAACCCAAAACCCTCGCGTACCAGAGAATGAACAGAGAAGGAAGAGTTGAGATTGAGGAAGATGAAGAACAAACCTTCGAAGAATTGGGACTTGACCCTCGTCTAATCCGTGCTTTAACCAAGAAAACTATCGATAAACCAACTCCTATTCAGCGAGTTGCTATTCCTCTAATCCTC..................................................................................GAAGGGAAAGATGTGGTTGCTCGAGCTAAGACTGGTTCTGGAAAGACATTTGCTTATCTCCTTCCTTTACTTCACAAGCTTTTTACTCAGTCATCTTCAACAAAGAATCTTGCTCCTACTGCGTTGATTCTTGTACCTACAAGGGAATTGTGTCAACAG...................................................................................GTTTGTTCGGAGGCGAATTCGTTGATTGAACTATGTAGAGTGCAATTAAGGCTTGTCCAATTGACAAGTTCTATGTCTGTTTCTGAATTG...................................................................................................AGAACTACATTGGCGGGGCCTCCGGAGATCGTTATATCTACTCCTGCTTGTATACAGACATGCTTGTCAAATGGAGTTATTCAAGGGAAAGCTGTTCAAGATTCTCTGTCCATTCTCATTCTCGATGAG........................................................................................................................................................................................................................................................................................................................................................................GCAGATCTTCTTTTGTCTTATGGATATGAAGATGATCTGAAAGCTCTTACATCTCATGTACCAAGACGTTGCCAGTGCCTTCTGATGTCTGCAACCTCAAG................................................................................................................................................................................................TTCTGACGTTGAAAAGCTGAAGAAGCTTATTTTACACAATCCCTACATCCTGACTTTGCCTGAGGTGGGAGAAACAAAGGATGACATTATCCCAAAAAATGTACAGCAATTTTAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCTTGTGCTGCTCGTGATAAGCTTGTCCATGTCCTTGCCCTCTTGAAGCTTGAGTTGGTCCAGAAAAAAGTCTTGATATTTACAAATTCAATTGACACGAGTTTTAGACTCAAACTATTCTTTGAGCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGGATCAAGTCTGCAGTTTTAAATGCCGAGCTGCCTCAGAGTTCTCGTCTACACATCCTTGAG..........................................................................................................................GAATTTAATGCTGGGCTATTTGATTACTTGATTGCGACTGATGAAAGTCAATCAGAAGGAAAGGAAAAAGTTGATGATCAAAATGGCAGTGAGCGAAAAAAATCAAAAAAACATCGAAAGCATAAATTGGATGCAGAGTTTGGTGTAGTCAGAGGGATAGACTTCAAAAATGTGCATACG....................................................................................................................................................................................GTGATAAATTATGAGATGCCTCAAACAGCTGCAGGCTATGTACATCGAATTGGACGTACTGGAAGAGCATATAATACTGGAGCATCTGTCTCTCTT........................................................................................................................................................................................................................................................................................................................................................................................GTCTCTGATGAAGAGACAGAAATATTTGAAGAGATTAAATCTTTACTGGGGGAAAATGAAGACAAGGTGTCACAGTTTATTGCTCCATTCCCATTGCTGAGTAAAAATGCAGTAGAGTCTTTGCGTTACCGAGCTGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTTGGAAGGAGTATTACAAAAATTGCAGTAAGAGAATCACGGGCTCAGGATCTGAGGAATGAAATTCTTAATTCTCAAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGAAGGCTCATTTTCAAGATAATCCAAAAGACTTAG............................................................................ATCTTCTGAAGCATGATAAGATGTTAAGCAAGAAAGCACCTGCCGCTCACCTACGTGATGTACCTGACTACCTATTAGATCCAACGACACAAGAAGCTAGCAAGATTGTGAAGCTGGCCAGAGCTGCAATGGGCAATACTAATCCATCTCGTGGCAAAGGATCAAAGGGAAGGTTCAAAAGAAGCAGAGACCCTCTTAAAACATTTTCAGCTGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAGCGAGCAGGGAAAGGCGGGATCAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E365610" ref_strand="+" ref_description="SGN-E365610 [cLPT-12-A18]">
      <seq>ccctttgtgtagtagtcttcccccaaaagccaaaaccctcgcgtaccagagaatgaacagagaaggaagagttgagaatgaggaagatgaagaacaaaccttcgaagaattgggacttgaccctcgtctaatccgtgctttaaccaagaaaactatcgataaaccaactcctattcagcgagttgctattcctctaatcctcgaagggaaagatgtggttgctcgagctaagactggttctggaaagacatttgcttatctccttcctttacttcacaagctttttactcagtcatcttcaacaaagaatcttgctcctactgcatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="+" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="41937" stop="42945"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="42237" g_stop="42438" g_length="202"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="202" r_length="202" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="42439" i_stop="42520" i_length="82">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42521" g_stop="42645" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="203" r_stop="327" r_length="125" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="+" ref_id="SGN-E365610" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>327</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E365610" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="42237" e_stop="42438"/>
          <exon e_start="42521" e_stop="42645"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCTTTGTGTAGTAGTCTTCCCCCAAAACCCAAAACCCTCGCGTACCAGAGAATGAACAGAGAAGGAAGAGTTGAGATTGAGGAAGATGAAGAACAAACCTTCGAAGAATTGGGACTTGACCCTCGTCTAATCCGTGCTTTAACCAAGAAAACTATCGATAAACCAACTCCTATTCAGCGAGTTGCTATTCCTCTAATCCTCGTAAGTTTACAATACTTTCATTCTCTTCGCAGTTTTGTTTGTTGAGCTGATTTCATTGTCTATGGCTACTTTTTTTTTTTAGGAAGGGAAAGATGTGGTTGCTCGAGCTAAGACTGGTTCTGGAAAGACATTTGCTTATCTCCTTCCTTTACTTCACAAGCTTTTTACTCAGTCATCTTCAACAAAGAATCTTGCTCCTACTGCGTT</genome_strand>
        <mrna_strand>CCCTTTGTGTAGTAGTCTTCCCCCAAAAGCCAAAACCCTCGCGTACCAGAGAATGAACAGAGAAGGAAGAGTTGAGAATGAGGAAGATGAAGAACAAACCTTCGAAGAATTGGGACTTGACCCTCGTCTAATCCGTGCTTTAACCAAGAAAACTATCGATAAACCAACTCCTATTCAGCGAGTTGCTATTCCTCTAATCCTC..................................................................................GAAGGGAAAGATGTGGTTGCTCGAGCTAAGACTGGTTCTGGAAAGACATTTGCTTATCTCCTTCCTTTACTTCACAAGCTTTTTACTCAGTCATCTTCAACAAAGAATCTTGCTCCTACTGCATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E452544" ref_strand="+" ref_description="SGN-E452544 [cSTS-17-M11]">
      <seq>gaaacccaaaacccaaaaccctcgcctaccagagaatgaacaaagaaggaagagttgaggaggaggaagaagaagaacaaaccttcgaagaattgggacttgaccctcgtctaatccgtgctttaaccaagaaaactatcgataaaccaactccaattcagcgagttgctattcctctaatcctcgaagggaaagatgtggttgctcgagctaagactggttctggaaagacatttgcttatctccttcctttacttcacaagctttttactcagtcatcttcagtcaagaatcttgctcctactgcattgattcttgtacctacaagggaattgtgtcaacaggtttgttcggaggctaattcgttgattgaactatgtagagtgcaattaaggcttgtccaattgacaagttctatgtctgtttctgaattgagaactacgttggcggggcctccggaaattgttatatctactcctgcttgtatacagacatgcttgtcaaatggagttattcaagcgaaagctgttcaagattctctgtccattctcattcttgatgaggcagatcttcttttgtcatatggatatgaagatgatctgaaagctcttacatctcatgtaccaagacgttgccagtgccttctgatgtctgcaccctcaagttctgacgttgaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="+" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="41958" stop="43850"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="42254" g_stop="42438" g_length="185"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="185" r_length="185" r_score="0.941"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="42439" i_stop="42520" i_length="82">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42521" g_stop="42679" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="186" r_stop="344" r_length="159" r_score="0.975"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42680" i_stop="42762" i_length="83">
            <donor d_prob="0.777" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="42763" g_stop="42852" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="345" r_stop="434" r_length="90" r_score="0.989"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="42853" i_stop="42951" i_length="99">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="42952" g_stop="43080" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="435" r_stop="563" r_length="129" r_score="0.961"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="43081" i_stop="43440" i_length="360">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.771" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="43441" g_stop="43541" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="564" r_stop="664" r_length="101" r_score="0.980"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="43542" i_stop="43733" i_length="192">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.932" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="43734" g_stop="43747" g_length="14"/>
          <reference_exon_boundary r_type="cDNA" r_start="665" r_stop="678" r_length="14" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="+" ref_id="SGN-E452544" ref_strand="+">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>678</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E452544" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="42254" e_stop="42438"/>
          <exon e_start="42521" e_stop="42679"/>
          <exon e_start="42763" e_stop="42852"/>
          <exon e_start="42952" e_stop="43080"/>
          <exon e_start="43441" e_stop="43541"/>
          <exon e_start="43734" e_stop="43747"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCCCCCAAAACCCAAAACCCTCGCGTACCAGAGAATGAACAGAGAAGGAAGAGTTGAGATTGAGGAAGATGAAGAACAAACCTTCGAAGAATTGGGACTTGACCCTCGTCTAATCCGTGCTTTAACCAAGAAAACTATCGATAAACCAACTCCTATTCAGCGAGTTGCTATTCCTCTAATCCTCGTAAGTTTACAATACTTTCATTCTCTTCGCAGTTTTGTTTGTTGAGCTGATTTCATTGTCTATGGCTACTTTTTTTTTTTAGGAAGGGAAAGATGTGGTTGCTCGAGCTAAGACTGGTTCTGGAAAGACATTTGCTTATCTCCTTCCTTTACTTCACAAGCTTTTTACTCAGTCATCTTCAACAAAGAATCTTGCTCCTACTGCGTTGATTCTTGTACCTACAAGGGAATTGTGTCAACAGGTTGAAACTTTTTGCTATTATTTTGGGGTTTTATTTTGTTTTGAGTTTGTGGGTTTATTTTAATTGTGTTTGTTGTTGTTCAGGTTTGTTCGGAGGCGAATTCGTTGATTGAACTATGTAGAGTGCAATTAAGGCTTGTCCAATTGACAAGTTCTATGTCTGTTTCTGAATTGGTTGGTTTCTTTTGTTCACAATTGTTTGCTGATTATGAAGTTTTAATCTTTATGGGTATGTGATAAAGTGATCGTTTTTTATGATCTTATGGTTTTTAGAGAACTACATTGGCGGGGCCTCCGGAGATCGTTATATCTACTCCTGCTTGTATACAGACATGCTTGTCAAATGGAGTTATTCAAGGGAAAGCTGTTCAAGATTCTCTGTCCATTCTCATTCTCGATGAGGTGGGTTAGTTTATGTTACATTGTTCCTCTTAAATTCTTTTAGTGGAAAGACTTTTTGCTGATGTGGTGAGATATGTAATGAGTTGCACTGTTTAAAATCTCAAAAGTTTTACTGTAAAGGTCCGGTTTTGTATGGTGATAGTCAACGGTTCATATCCAATATTAGGTAAAACTTACTAGATACAATAGACTCTGGTATCTGGCGAGGTTTATGACCCACCTTTAGTAGTGATAGTTACTTTTTGATTTCATATCTTTTCTCTTTCATTTGTGAATTTGAATGTTTGCATTAGAATTGGATTGTGTTTGATTGTATTCACCCGAAAGGACATGAGGTTGAGAATTATGTTTCTGTATCAGGCAGATCTTCTTTTGTCTTATGGATATGAAGATGATCTGAAAGCTCTTACATCTCATGTACCAAGACGTTGCCAGTGCCTTCTGATGTCTGCAACCTCAAGGTATGCTCGCCTTACTATATTCACATATATATGTCAAGCAAATTCTTGCTGATTCTTCCACTGTCGCCTATGCTGGTTTTCTCCAGCACAAAGTTCTTGATTGTTACCATCTTACTTCCCATCTTCCCCCCCCCCCAACCCCCCACATCTCAAGGTTTGGATATGAACTTTCTTGGTCGTGTTAATATGCAGTTCTGACGTTGAAA</genome_strand>
        <mrna_strand>GAAACCCAAAACCCAAAACCCTCGCCTACCAGAGAATGAACAAAGAAGGAAGAGTTGAGGAGGAGGAAGAAGAAGAACAAACCTTCGAAGAATTGGGACTTGACCCTCGTCTAATCCGTGCTTTAACCAAGAAAACTATCGATAAACCAACTCCAATTCAGCGAGTTGCTATTCCTCTAATCCTC..................................................................................GAAGGGAAAGATGTGGTTGCTCGAGCTAAGACTGGTTCTGGAAAGACATTTGCTTATCTCCTTCCTTTACTTCACAAGCTTTTTACTCAGTCATCTTCAGTCAAGAATCTTGCTCCTACTGCATTGATTCTTGTACCTACAAGGGAATTGTGTCAACAG...................................................................................GTTTGTTCGGAGGCTAATTCGTTGATTGAACTATGTAGAGTGCAATTAAGGCTTGTCCAATTGACAAGTTCTATGTCTGTTTCTGAATTG...................................................................................................AGAACTACGTTGGCGGGGCCTCCGGAAATTGTTATATCTACTCCTGCTTGTATACAGACATGCTTGTCAAATGGAGTTATTCAAGCGAAAGCTGTTCAAGATTCTCTGTCCATTCTCATTCTTGATGAG........................................................................................................................................................................................................................................................................................................................................................................GCAGATCTTCTTTTGTCATATGGATATGAAGATGATCTGAAAGCTCTTACATCTCATGTACCAAGACGTTGCCAGTGCCTTCTGATGTCTGCACCCTCAAG................................................................................................................................................................................................TTCTGACGTTGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E448355" ref_strand="+" ref_description="SGN-E448355 [cSTS-2-B4]">
      <seq>ctcttttaactctttgaaacccaaaacccaaaaccctcgcctaccagagaatgaacaaagaaggaagagttgaggaggaggaggaagaagaacaaaccttcgaagaattgggacttgaccctcgtctaatccgtgctttaaccaagaaatctatcgataaaccaactcctattcagcgagttgctattcctctaatcctcgaagggaaagatgtggtcgctcgagctaagactggttctggaaagacatttgcttatctccttcctttacttcacaagctttttactcagtcatcttcagtcaagaatcttgctcctactgcattgattcttgtacctacaagggaattgtgtcaacaggtttgttcggaggctaattcgttgattgaactatgtagagtgcaattaaggcttgtccaattgacaagttctatgtctgtttctgaattgagaactacgttggcggggcctccggaaattgttatatctactcctgcttgtatacagacatgcttgtcaaatggacttattcaagggaaagctgttcaagattctctgtccattctcattctcgatgaggcagatcttcttttgtcatatggatatgaagatgatctgaaagctcttacatctcatgtaccaagacgttgccagtgccttctgatgtctgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="+" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="41958" stop="43832"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="42258" g_stop="42438" g_length="181"/>
          <reference_exon_boundary r_type="cDNA" r_start="20" r_stop="200" r_length="181" r_score="0.956"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="42439" i_stop="42520" i_length="82">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42521" g_stop="42679" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="201" r_stop="359" r_length="159" r_score="0.969"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42680" i_stop="42762" i_length="83">
            <donor d_prob="0.777" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="42763" g_stop="42852" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="360" r_stop="449" r_length="90" r_score="0.989"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="42853" i_stop="42951" i_length="99">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="42952" g_stop="43080" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="450" r_stop="578" r_length="129" r_score="0.969"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="43081" i_stop="43440" i_length="360">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.771" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="43441" g_stop="43532" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="579" r_stop="670" r_length="92" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="+" ref_id="SGN-E448355" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>651</cumulative_length_of_scored_exons>
        <coverage percentage="0.972" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E448355" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="42258" e_stop="42438"/>
          <exon e_start="42521" e_stop="42679"/>
          <exon e_start="42763" e_stop="42852"/>
          <exon e_start="42952" e_stop="43080"/>
          <exon e_start="43441" e_stop="43532"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCAAAACCCAAAACCCTCGCGTACCAGAGAATGAACAGAGAAGGAAGAGTTGAGATTGAGGAAGATGAAGAACAAACCTTCGAAGAATTGGGACTTGACCCTCGTCTAATCCGTGCTTTAACCAAGAAAACTATCGATAAACCAACTCCTATTCAGCGAGTTGCTATTCCTCTAATCCTCGTAAGTTTACAATACTTTCATTCTCTTCGCAGTTTTGTTTGTTGAGCTGATTTCATTGTCTATGGCTACTTTTTTTTTTTAGGAAGGGAAAGATGTGGTTGCTCGAGCTAAGACTGGTTCTGGAAAGACATTTGCTTATCTCCTTCCTTTACTTCACAAGCTTTTTACTCAGTCATCTTCAACAAAGAATCTTGCTCCTACTGCGTTGATTCTTGTACCTACAAGGGAATTGTGTCAACAGGTTGAAACTTTTTGCTATTATTTTGGGGTTTTATTTTGTTTTGAGTTTGTGGGTTTATTTTAATTGTGTTTGTTGTTGTTCAGGTTTGTTCGGAGGCGAATTCGTTGATTGAACTATGTAGAGTGCAATTAAGGCTTGTCCAATTGACAAGTTCTATGTCTGTTTCTGAATTGGTTGGTTTCTTTTGTTCACAATTGTTTGCTGATTATGAAGTTTTAATCTTTATGGGTATGTGATAAAGTGATCGTTTTTTATGATCTTATGGTTTTTAGAGAACTACATTGGCGGGGCCTCCGGAGATCGTTATATCTACTCCTGCTTGTATACAGACATGCTTGTCAAATGGAGTTATTCAAGGGAAAGCTGTTCAAGATTCTCTGTCCATTCTCATTCTCGATGAGGTGGGTTAGTTTATGTTACATTGTTCCTCTTAAATTCTTTTAGTGGAAAGACTTTTTGCTGATGTGGTGAGATATGTAATGAGTTGCACTGTTTAAAATCTCAAAAGTTTTACTGTAAAGGTCCGGTTTTGTATGGTGATAGTCAACGGTTCATATCCAATATTAGGTAAAACTTACTAGATACAATAGACTCTGGTATCTGGCGAGGTTTATGACCCACCTTTAGTAGTGATAGTTACTTTTTGATTTCATATCTTTTCTCTTTCATTTGTGAATTTGAATGTTTGCATTAGAATTGGATTGTGTTTGATTGTATTCACCCGAAAGGACATGAGGTTGAGAATTATGTTTCTGTATCAGGCAGATCTTCTTTTGTCTTATGGATATGAAGATGATCTGAAAGCTCTTACATCTCATGTACCAAGACGTTGCCAGTGCCTTCTGATGTCTGC</genome_strand>
        <mrna_strand>CCCAAAACCCAAAACCCTCGCCTACCAGAGAATGAACAAAGAAGGAAGAGTTGAGGAGGAGGAGGAAGAAGAACAAACCTTCGAAGAATTGGGACTTGACCCTCGTCTAATCCGTGCTTTAACCAAGAAATCTATCGATAAACCAACTCCTATTCAGCGAGTTGCTATTCCTCTAATCCTC..................................................................................GAAGGGAAAGATGTGGTCGCTCGAGCTAAGACTGGTTCTGGAAAGACATTTGCTTATCTCCTTCCTTTACTTCACAAGCTTTTTACTCAGTCATCTTCAGTCAAGAATCTTGCTCCTACTGCATTGATTCTTGTACCTACAAGGGAATTGTGTCAACAG...................................................................................GTTTGTTCGGAGGCTAATTCGTTGATTGAACTATGTAGAGTGCAATTAAGGCTTGTCCAATTGACAAGTTCTATGTCTGTTTCTGAATTG...................................................................................................AGAACTACGTTGGCGGGGCCTCCGGAAATTGTTATATCTACTCCTGCTTGTATACAGACATGCTTGTCAAATGGACTTATTCAAGGGAAAGCTGTTCAAGATTCTCTGTCCATTCTCATTCTCGATGAG........................................................................................................................................................................................................................................................................................................................................................................GCAGATCTTCTTTTGTCATATGGATATGAAGATGATCTGAAAGCTCTTACATCTCATGTACCAAGACGTTGCCAGTGCCTTCTGATGTCTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E481468" ref_strand="+" ref_description="SGN-E481468 [cSTD-18-E24]">
      <seq>cttctccttttaactctttgaaacccaaaacccaaaaccctcgcctaccagagaatgaacaaagaaggaagagttgaggaggaggaagaagaagaacaaaccttcgaagaattgggacttgaccctcgtctaatccgtgctttaaccaagaaaactatcgataaaccaactccaattcagcgagttgctattcctctaatcctcgaagggaaagatgtggttgctcgagctaagactggttctggaaaaacatttgcttatctccttcctttacttcacaagctttttactcagtcatcttcagccaagaatcttgctcctactgcattgattctcgtacctacaagggaattgtgtcaacaggttgaaactttttgctattattttgttttctttttttgttttgagtttgtgggtttgttttatttgtgtttgttgttgttcaggtttgttcggaggctaattcgttgattgaactatgtagagtgcaattaaggcttgtccaattgacaagttctatgtctgtttctgaattgagaactacgttggcggggcctccggaaattgttatttctactcctgcttgtatacagacatgcttgtcaaatggagttattcaagcgaaagctgttcaagattctctgtccattctcattctcgatgaggcagatcttcttttgtcatatggatatgaagatgatctgaaagctcttacatctcatgtacca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="+" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="41958" stop="43803"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="42258" g_stop="42438" g_length="181"/>
          <reference_exon_boundary r_type="cDNA" r_start="24" r_stop="204" r_length="181" r_score="0.961"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="42439" i_stop="42520" i_length="82">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42521" g_stop="42852" g_length="332"/>
          <reference_exon_boundary r_type="cDNA" r_start="205" r_stop="536" r_length="332" r_score="0.961"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42853" i_stop="42951" i_length="99">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="42952" g_stop="43080" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="537" r_stop="665" r_length="129" r_score="0.961"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="43081" i_stop="43440" i_length="360">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.771" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="43441" g_stop="43503" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="666" r_stop="728" r_length="63" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="+" ref_id="SGN-E481468" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>705</cumulative_length_of_scored_exons>
        <coverage percentage="0.968" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E481468" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="42258" e_stop="42438"/>
          <exon e_start="42521" e_stop="42852"/>
          <exon e_start="42952" e_stop="43080"/>
          <exon e_start="43441" e_stop="43503"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCAAAACCCAAAACCCTCGCGTACCAGAGAATGAACAGAGAAGGAAGAGTTGAGATTGAGGAAGATGAAGAACAAACCTTCGAAGAATTGGGACTTGACCCTCGTCTAATCCGTGCTTTAACCAAGAAAACTATCGATAAACCAACTCCTATTCAGCGAGTTGCTATTCCTCTAATCCTCGTAAGTTTACAATACTTTCATTCTCTTCGCAGTTTTGTTTGTTGAGCTGATTTCATTGTCTATGGCTACTTTTTTTTTTTAGGAAGGGAAAGATGTGGTTGCTCGAGCTAAGACTGGTTCTGGAAAGACATTTGCTTATCTCCTTCCTTTACTTCACAAGCTTTTTACTCAGTCATCTTCAACAAAGAATCTTGCTCCTACTGCGTTGATTCTTGTACCTACAAGGGAATTGTGTCAACAGGTTGAAACTTTTTGCTATTATTTTGGGGTTTTATTTTGTTTTGAGTTTGTGGGTTTATTTTAATTGTGTTTGTTGTTGTTCAGGTTTGTTCGGAGGCGAATTCGTTGATTGAACTATGTAGAGTGCAATTAAGGCTTGTCCAATTGACAAGTTCTATGTCTGTTTCTGAATTGGTTGGTTTCTTTTGTTCACAATTGTTTGCTGATTATGAAGTTTTAATCTTTATGGGTATGTGATAAAGTGATCGTTTTTTATGATCTTATGGTTTTTAGAGAACTACATTGGCGGGGCCTCCGGAGATCGTTATATCTACTCCTGCTTGTATACAGACATGCTTGTCAAATGGAGTTATTCAAGGGAAAGCTGTTCAAGATTCTCTGTCCATTCTCATTCTCGATGAGGTGGGTTAGTTTATGTTACATTGTTCCTCTTAAATTCTTTTAGTGGAAAGACTTTTTGCTGATGTGGTGAGATATGTAATGAGTTGCACTGTTTAAAATCTCAAAAGTTTTACTGTAAAGGTCCGGTTTTGTATGGTGATAGTCAACGGTTCATATCCAATATTAGGTAAAACTTACTAGATACAATAGACTCTGGTATCTGGCGAGGTTTATGACCCACCTTTAGTAGTGATAGTTACTTTTTGATTTCATATCTTTTCTCTTTCATTTGTGAATTTGAATGTTTGCATTAGAATTGGATTGTGTTTGATTGTATTCACCCGAAAGGACATGAGGTTGAGAATTATGTTTCTGTATCAGGCAGATCTTCTTTTGTCTTATGGATATGAAGATGATCTGAAAGCTCTTACATCTCATGTACCA</genome_strand>
        <mrna_strand>CCCAAAACCCAAAACCCTCGCCTACCAGAGAATGAACAAAGAAGGAAGAGTTGAGGAGGAGGAAGAAGAAGAACAAACCTTCGAAGAATTGGGACTTGACCCTCGTCTAATCCGTGCTTTAACCAAGAAAACTATCGATAAACCAACTCCAATTCAGCGAGTTGCTATTCCTCTAATCCTC..................................................................................GAAGGGAAAGATGTGGTTGCTCGAGCTAAGACTGGTTCTGGAAAAACATTTGCTTATCTCCTTCCTTTACTTCACAAGCTTTTTACTCAGTCATCTTCAGCCAAGAATCTTGCTCCTACTGCATTGATTCTCGTACCTACAAGGGAATTGTGTCAACAGGTTGAAACTTTTTGCTATTATTTTGTTTTCTTTTTTTGTTTTGAGTTTGTGGGTTTGTTTTATTTGTGTTTGTTGTTGTTCAGGTTTGTTCGGAGGCTAATTCGTTGATTGAACTATGTAGAGTGCAATTAAGGCTTGTCCAATTGACAAGTTCTATGTCTGTTTCTGAATTG...................................................................................................AGAACTACGTTGGCGGGGCCTCCGGAAATTGTTATTTCTACTCCTGCTTGTATACAGACATGCTTGTCAAATGGAGTTATTCAAGCGAAAGCTGTTCAAGATTCTCTGTCCATTCTCATTCTCGATGAG........................................................................................................................................................................................................................................................................................................................................................................GCAGATCTTCTTTTGTCATATGGATATGAAGATGATCTGAAAGCTCTTACATCTCATGTACCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E428940" ref_strand="+" ref_description="SGN-E428940 [STM-51-M13]">
      <seq>cttctccttttaactctttgaaacccaaaacccaaaaccctcgcctaccagagaatgaacaaagaaggaagagttgaggaggaggaagaagaagaacaaaccttcgaagaattgggacttgaccctcgtctaatccgtgctttaaccaagaaaactatcgataaaccaactccaattcagcgagttgctattcctctaatcctcgaagggaaagatgtggttgctcgagctaagactggttctggaaaaacatttgcttatctccttcctttacttcacaagctttttactcagtcatcttcagccaagaatcttgctcctactgcattgattctcgtacctacaagggaattgtgtcaacaggttgaaactttttgctattattttgttttctttttttgttttgagtttgtgggtttgttttatttgtgtttgttgttgttcaggtttgttcggaggctaattcgttgattgaactatgtagagtgcaattaaggcttgtccaattgacaagttctatgtctgtttctgaattgagaactacgttggcgggggcctccggaaattgttatttctactcctgcttgtatacagacatgcttgtcaaatggagttattcaagcgaaagctgttcaagattctctgtccattctcattctcgatgaggcagatcttcttttgtcatatggatatgaagatgatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="+" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="41958" stop="43777"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="42258" g_stop="42438" g_length="181"/>
          <reference_exon_boundary r_type="cDNA" r_start="24" r_stop="204" r_length="181" r_score="0.961"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="42439" i_stop="42520" i_length="82">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42521" g_stop="42852" g_length="332"/>
          <reference_exon_boundary r_type="cDNA" r_start="205" r_stop="536" r_length="332" r_score="0.961"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42853" i_stop="42951" i_length="99">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="42952" g_stop="43080" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="537" r_stop="666" r_length="130" r_score="0.946"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="43081" i_stop="43440" i_length="360">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.771" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="43441" g_stop="43477" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="667" r_stop="703" r_length="37" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="+" ref_id="SGN-E428940" ref_strand="+">
        <total_alignment_score>0.958</total_alignment_score>
        <cumulative_length_of_scored_exons>679</cumulative_length_of_scored_exons>
        <coverage percentage="0.966" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E428940" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="42258" e_stop="42438"/>
          <exon e_start="42521" e_stop="42852"/>
          <exon e_start="42952" e_stop="43080"/>
          <exon e_start="43441" e_stop="43477"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCAAAACCCAAAACCCTCGCGTACCAGAGAATGAACAGAGAAGGAAGAGTTGAGATTGAGGAAGATGAAGAACAAACCTTCGAAGAATTGGGACTTGACCCTCGTCTAATCCGTGCTTTAACCAAGAAAACTATCGATAAACCAACTCCTATTCAGCGAGTTGCTATTCCTCTAATCCTCGTAAGTTTACAATACTTTCATTCTCTTCGCAGTTTTGTTTGTTGAGCTGATTTCATTGTCTATGGCTACTTTTTTTTTTTAGGAAGGGAAAGATGTGGTTGCTCGAGCTAAGACTGGTTCTGGAAAGACATTTGCTTATCTCCTTCCTTTACTTCACAAGCTTTTTACTCAGTCATCTTCAACAAAGAATCTTGCTCCTACTGCGTTGATTCTTGTACCTACAAGGGAATTGTGTCAACAGGTTGAAACTTTTTGCTATTATTTTGGGGTTTTATTTTGTTTTGAGTTTGTGGGTTTATTTTAATTGTGTTTGTTGTTGTTCAGGTTTGTTCGGAGGCGAATTCGTTGATTGAACTATGTAGAGTGCAATTAAGGCTTGTCCAATTGACAAGTTCTATGTCTGTTTCTGAATTGGTTGGTTTCTTTTGTTCACAATTGTTTGCTGATTATGAAGTTTTAATCTTTATGGGTATGTGATAAAGTGATCGTTTTTTATGATCTTATGGTTTTTAGAGAACTACATTGGC-GGGGCCTCCGGAGATCGTTATATCTACTCCTGCTTGTATACAGACATGCTTGTCAAATGGAGTTATTCAAGGGAAAGCTGTTCAAGATTCTCTGTCCATTCTCATTCTCGATGAGGTGGGTTAGTTTATGTTACATTGTTCCTCTTAAATTCTTTTAGTGGAAAGACTTTTTGCTGATGTGGTGAGATATGTAATGAGTTGCACTGTTTAAAATCTCAAAAGTTTTACTGTAAAGGTCCGGTTTTGTATGGTGATAGTCAACGGTTCATATCCAATATTAGGTAAAACTTACTAGATACAATAGACTCTGGTATCTGGCGAGGTTTATGACCCACCTTTAGTAGTGATAGTTACTTTTTGATTTCATATCTTTTCTCTTTCATTTGTGAATTTGAATGTTTGCATTAGAATTGGATTGTGTTTGATTGTATTCACCCGAAAGGACATGAGGTTGAGAATTATGTTTCTGTATCAGGCAGATCTTCTTTTGTCTTATGGATATGAAGATGATC</genome_strand>
        <mrna_strand>CCCAAAACCCAAAACCCTCGCCTACCAGAGAATGAACAAAGAAGGAAGAGTTGAGGAGGAGGAAGAAGAAGAACAAACCTTCGAAGAATTGGGACTTGACCCTCGTCTAATCCGTGCTTTAACCAAGAAAACTATCGATAAACCAACTCCAATTCAGCGAGTTGCTATTCCTCTAATCCTC..................................................................................GAAGGGAAAGATGTGGTTGCTCGAGCTAAGACTGGTTCTGGAAAAACATTTGCTTATCTCCTTCCTTTACTTCACAAGCTTTTTACTCAGTCATCTTCAGCCAAGAATCTTGCTCCTACTGCATTGATTCTCGTACCTACAAGGGAATTGTGTCAACAGGTTGAAACTTTTTGCTATTATTTTGTTTTCTTTTTTTGTTTTGAGTTTGTGGGTTTGTTTTATTTGTGTTTGTTGTTGTTCAGGTTTGTTCGGAGGCTAATTCGTTGATTGAACTATGTAGAGTGCAATTAAGGCTTGTCCAATTGACAAGTTCTATGTCTGTTTCTGAATTG...................................................................................................AGAACTACGTTGGCGGGGGCCTCCGGAAATTGTTATTTCTACTCCTGCTTGTATACAGACATGCTTGTCAAATGGAGTTATTCAAGCGAAAGCTGTTCAAGATTCTCTGTCCATTCTCATTCTCGATGAG........................................................................................................................................................................................................................................................................................................................................................................GCAGATCTTCTTTTGTCATATGGATATGAAGATGATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E559930" ref_strand="+" ref_description="SGN-E559930 [19504]">
      <seq>cccaaaacccaaaaccctcgcctaccagagaatgaacaaagaaggaagagttgaggaggaggaagaagaagaacaaaccttcgaagaattgggacttgaccctcgtctaatccgtgctttaaccaagaaaactatcgataaaccaactccaattcagcgagttgctattcctctaatcctcgaagggaaagatgtggttgctcgagctaagactggttctggaaagacatttgcttatctccttcctttacttcacaagctttttactcagtcatcttcagccaagaatcttgctcctactgcattgattcttgtacctacaagggaattgtgtcaacaggtttgttcggaggctaattcgttgattgaactatgtagagtgcaattaaggcttgtccaattgacaagttctatgtctgtttctgaattgagaactacgttggcgggccctccggaaattgttatatctactcctgcttgtatacagacatgcttgtcaaatggagttattcaagcgaaagctgttcaagattctctgtccatcctcattctcgatgaggcagatcttcttttgtcatatggatatgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="+" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="41958" stop="43405"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="42258" g_stop="42438" g_length="181"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="181" r_length="181" r_score="0.961"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="42439" i_stop="42520" i_length="82">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42521" g_stop="42679" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="182" r_stop="340" r_length="159" r_score="0.981"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42680" i_stop="42762" i_length="83">
            <donor d_prob="0.777" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="42763" g_stop="42852" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="341" r_stop="430" r_length="90" r_score="0.989"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="42853" i_stop="42951" i_length="99">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="42952" g_stop="43080" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="431" r_stop="559" r_length="129" r_score="0.953"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="+" ref_id="SGN-E559930" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>559</cumulative_length_of_scored_exons>
        <coverage percentage="0.949" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E559930" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="42258" e_stop="42438"/>
          <exon e_start="42521" e_stop="42679"/>
          <exon e_start="42763" e_stop="42852"/>
          <exon e_start="42952" e_stop="43080"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCAAAACCCAAAACCCTCGCGTACCAGAGAATGAACAGAGAAGGAAGAGTTGAGATTGAGGAAGATGAAGAACAAACCTTCGAAGAATTGGGACTTGACCCTCGTCTAATCCGTGCTTTAACCAAGAAAACTATCGATAAACCAACTCCTATTCAGCGAGTTGCTATTCCTCTAATCCTCGTAAGTTTACAATACTTTCATTCTCTTCGCAGTTTTGTTTGTTGAGCTGATTTCATTGTCTATGGCTACTTTTTTTTTTTAGGAAGGGAAAGATGTGGTTGCTCGAGCTAAGACTGGTTCTGGAAAGACATTTGCTTATCTCCTTCCTTTACTTCACAAGCTTTTTACTCAGTCATCTTCAACAAAGAATCTTGCTCCTACTGCGTTGATTCTTGTACCTACAAGGGAATTGTGTCAACAGGTTGAAACTTTTTGCTATTATTTTGGGGTTTTATTTTGTTTTGAGTTTGTGGGTTTATTTTAATTGTGTTTGTTGTTGTTCAGGTTTGTTCGGAGGCGAATTCGTTGATTGAACTATGTAGAGTGCAATTAAGGCTTGTCCAATTGACAAGTTCTATGTCTGTTTCTGAATTGGTTGGTTTCTTTTGTTCACAATTGTTTGCTGATTATGAAGTTTTAATCTTTATGGGTATGTGATAAAGTGATCGTTTTTTATGATCTTATGGTTTTTAGAGAACTACATTGGCGGGGCCTCCGGAGATCGTTATATCTACTCCTGCTTGTATACAGACATGCTTGTCAAATGGAGTTATTCAAGGGAAAGCTGTTCAAGATTCTCTGTCCATTCTCATTCTCGATGAG</genome_strand>
        <mrna_strand>CCCAAAACCCAAAACCCTCGCCTACCAGAGAATGAACAAAGAAGGAAGAGTTGAGGAGGAGGAAGAAGAAGAACAAACCTTCGAAGAATTGGGACTTGACCCTCGTCTAATCCGTGCTTTAACCAAGAAAACTATCGATAAACCAACTCCAATTCAGCGAGTTGCTATTCCTCTAATCCTC..................................................................................GAAGGGAAAGATGTGGTTGCTCGAGCTAAGACTGGTTCTGGAAAGACATTTGCTTATCTCCTTCCTTTACTTCACAAGCTTTTTACTCAGTCATCTTCAGCCAAGAATCTTGCTCCTACTGCATTGATTCTTGTACCTACAAGGGAATTGTGTCAACAG...................................................................................GTTTGTTCGGAGGCTAATTCGTTGATTGAACTATGTAGAGTGCAATTAAGGCTTGTCCAATTGACAAGTTCTATGTCTGTTTCTGAATTG...................................................................................................AGAACTACGTTGGCGGGCCCTCCGGAAATTGTTATATCTACTCCTGCTTGTATACAGACATGCTTGTCAAATGGAGTTATTCAAGCGAAAGCTGTTCAAGATTCTCTGTCCATCCTCATTCTCGATGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E300855" ref_strand="+" ref_description="SGN-E300855 [cLEW-8-H21]">
      <seq>ccaaaacccaaaaccctcgcgtaccagagaatgaacagagaaggaagagttgagaatgaggaagatgaagaacaaaccttcgaagaattgggacttgaccctcgtctaatccgtgctttaaccaagaaaactatcgataaaccaactcctattcagcgagttgctattcctctaatcctcgaagggaaagatgtggttgctcgagctaagactggttctggaaagacatttgcttatctccttcctttacttcacaagctttttactcagtcatcttcaacaaagaatcttgctcctactgcgttgattcttgtacctacaagggaattgtgtcaacaggtttgttcggaggcgaattcgttgattgaactatgtagagtgcaattaaggcttgtccaattgacaagttctatgtctgtttctgaattgagaactacattggcggggcctccggagatcgttatatctactcctgcttgtatacagacatgcttgtcaaatggagttattcaagggaaagctgttcaagattctctgtccattctcattctcgatgaggcagatcttcttttgtcttatggatatgaagatgatctgaaagctcttaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="+" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="41959" stop="43791"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="42259" g_stop="42438" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="180" r_length="180" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="42439" i_stop="42520" i_length="82">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42521" g_stop="42679" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="181" r_stop="339" r_length="159" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42680" i_stop="42762" i_length="83">
            <donor d_prob="0.777" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="42763" g_stop="42852" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="340" r_stop="429" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="42853" i_stop="42951" i_length="99">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="42952" g_stop="43080" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="430" r_stop="558" r_length="129" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="43081" i_stop="43440" i_length="360">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.771" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="43441" g_stop="43491" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="559" r_stop="609" r_length="51" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="+" ref_id="SGN-E300855" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>609</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E300855" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="42259" e_stop="42438"/>
          <exon e_start="42521" e_stop="42679"/>
          <exon e_start="42763" e_stop="42852"/>
          <exon e_start="42952" e_stop="43080"/>
          <exon e_start="43441" e_stop="43491"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAAAACCCAAAACCCTCGCGTACCAGAGAATGAACAGAGAAGGAAGAGTTGAGATTGAGGAAGATGAAGAACAAACCTTCGAAGAATTGGGACTTGACCCTCGTCTAATCCGTGCTTTAACCAAGAAAACTATCGATAAACCAACTCCTATTCAGCGAGTTGCTATTCCTCTAATCCTCGTAAGTTTACAATACTTTCATTCTCTTCGCAGTTTTGTTTGTTGAGCTGATTTCATTGTCTATGGCTACTTTTTTTTTTTAGGAAGGGAAAGATGTGGTTGCTCGAGCTAAGACTGGTTCTGGAAAGACATTTGCTTATCTCCTTCCTTTACTTCACAAGCTTTTTACTCAGTCATCTTCAACAAAGAATCTTGCTCCTACTGCGTTGATTCTTGTACCTACAAGGGAATTGTGTCAACAGGTTGAAACTTTTTGCTATTATTTTGGGGTTTTATTTTGTTTTGAGTTTGTGGGTTTATTTTAATTGTGTTTGTTGTTGTTCAGGTTTGTTCGGAGGCGAATTCGTTGATTGAACTATGTAGAGTGCAATTAAGGCTTGTCCAATTGACAAGTTCTATGTCTGTTTCTGAATTGGTTGGTTTCTTTTGTTCACAATTGTTTGCTGATTATGAAGTTTTAATCTTTATGGGTATGTGATAAAGTGATCGTTTTTTATGATCTTATGGTTTTTAGAGAACTACATTGGCGGGGCCTCCGGAGATCGTTATATCTACTCCTGCTTGTATACAGACATGCTTGTCAAATGGAGTTATTCAAGGGAAAGCTGTTCAAGATTCTCTGTCCATTCTCATTCTCGATGAGGTGGGTTAGTTTATGTTACATTGTTCCTCTTAAATTCTTTTAGTGGAAAGACTTTTTGCTGATGTGGTGAGATATGTAATGAGTTGCACTGTTTAAAATCTCAAAAGTTTTACTGTAAAGGTCCGGTTTTGTATGGTGATAGTCAACGGTTCATATCCAATATTAGGTAAAACTTACTAGATACAATAGACTCTGGTATCTGGCGAGGTTTATGACCCACCTTTAGTAGTGATAGTTACTTTTTGATTTCATATCTTTTCTCTTTCATTTGTGAATTTGAATGTTTGCATTAGAATTGGATTGTGTTTGATTGTATTCACCCGAAAGGACATGAGGTTGAGAATTATGTTTCTGTATCAGGCAGATCTTCTTTTGTCTTATGGATATGAAGATGATCTGAAAGCTCTTACA</genome_strand>
        <mrna_strand>CCAAAACCCAAAACCCTCGCGTACCAGAGAATGAACAGAGAAGGAAGAGTTGAGAATGAGGAAGATGAAGAACAAACCTTCGAAGAATTGGGACTTGACCCTCGTCTAATCCGTGCTTTAACCAAGAAAACTATCGATAAACCAACTCCTATTCAGCGAGTTGCTATTCCTCTAATCCTC..................................................................................GAAGGGAAAGATGTGGTTGCTCGAGCTAAGACTGGTTCTGGAAAGACATTTGCTTATCTCCTTCCTTTACTTCACAAGCTTTTTACTCAGTCATCTTCAACAAAGAATCTTGCTCCTACTGCGTTGATTCTTGTACCTACAAGGGAATTGTGTCAACAG...................................................................................GTTTGTTCGGAGGCGAATTCGTTGATTGAACTATGTAGAGTGCAATTAAGGCTTGTCCAATTGACAAGTTCTATGTCTGTTTCTGAATTG...................................................................................................AGAACTACATTGGCGGGGCCTCCGGAGATCGTTATATCTACTCCTGCTTGTATACAGACATGCTTGTCAAATGGAGTTATTCAAGGGAAAGCTGTTCAAGATTCTCTGTCCATTCTCATTCTCGATGAG........................................................................................................................................................................................................................................................................................................................................................................GCAGATCTTCTTTTGTCTTATGGATATGAAGATGATCTGAAAGCTCTTACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E332666" ref_strand="+" ref_description="SGN-E332666 [cTOD-18-J20]">
      <seq>caaaacccaaaaccctcgcgtaccagagaatgaacagagaaggaagagttgagaatgaggaagatgaagaacaaaccttcgaagaattgggacttgaccctcgtctaatccgtgctttaaccaagaaaactatcgataaaccaactcctattcagcgagttgctattcctctaatcctcgaagggaaagatgtggttgctcgagctaagactggttctggaaagacatttgcttatctccttcctttacttcacaagctttttactcagtcatcttcaacaaagaatcttgctcctactgcgttgattcttgtacctacaagggaattgtgtcaacaggtttgttcggaggcgaattcgttgattgaactatgtagagtgcaattaaggcttgtccaattgacaagttctatgtctgtttctgaattgagaactacattggcggggcctccggagatcgttatatctactcctgcttgtatacagacatgcttgtcaaatggagttattcaagggaaagctgttcaagattctctgtccattctcattctcgatgaggcagatcttcttttgtcttatggatatgaagatgatctgaaagctcttacatctcatgtaccaagacgttgccagtgccttctgatgtctgcaacctcaagttctgacgttgaaaagctgaagaagcttattttacacaatccctacatcctgactttgcct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="+" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="41960" stop="44094"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="42260" g_stop="42438" g_length="179"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="179" r_length="179" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="42439" i_stop="42520" i_length="82">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42521" g_stop="42679" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="180" r_stop="338" r_length="159" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42680" i_stop="42762" i_length="83">
            <donor d_prob="0.777" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="42763" g_stop="42852" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="339" r_stop="428" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="42853" i_stop="42951" i_length="99">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="42952" g_stop="43080" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="429" r_stop="557" r_length="129" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="43081" i_stop="43440" i_length="360">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.771" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="43441" g_stop="43541" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="558" r_stop="658" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="43542" i_stop="43733" i_length="192">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.932" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="43734" g_stop="43794" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="659" r_stop="719" r_length="61" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="+" ref_id="SGN-E332666" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>719</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E332666" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="42260" e_stop="42438"/>
          <exon e_start="42521" e_stop="42679"/>
          <exon e_start="42763" e_stop="42852"/>
          <exon e_start="42952" e_stop="43080"/>
          <exon e_start="43441" e_stop="43541"/>
          <exon e_start="43734" e_stop="43794"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAACCCAAAACCCTCGCGTACCAGAGAATGAACAGAGAAGGAAGAGTTGAGATTGAGGAAGATGAAGAACAAACCTTCGAAGAATTGGGACTTGACCCTCGTCTAATCCGTGCTTTAACCAAGAAAACTATCGATAAACCAACTCCTATTCAGCGAGTTGCTATTCCTCTAATCCTCGTAAGTTTACAATACTTTCATTCTCTTCGCAGTTTTGTTTGTTGAGCTGATTTCATTGTCTATGGCTACTTTTTTTTTTTAGGAAGGGAAAGATGTGGTTGCTCGAGCTAAGACTGGTTCTGGAAAGACATTTGCTTATCTCCTTCCTTTACTTCACAAGCTTTTTACTCAGTCATCTTCAACAAAGAATCTTGCTCCTACTGCGTTGATTCTTGTACCTACAAGGGAATTGTGTCAACAGGTTGAAACTTTTTGCTATTATTTTGGGGTTTTATTTTGTTTTGAGTTTGTGGGTTTATTTTAATTGTGTTTGTTGTTGTTCAGGTTTGTTCGGAGGCGAATTCGTTGATTGAACTATGTAGAGTGCAATTAAGGCTTGTCCAATTGACAAGTTCTATGTCTGTTTCTGAATTGGTTGGTTTCTTTTGTTCACAATTGTTTGCTGATTATGAAGTTTTAATCTTTATGGGTATGTGATAAAGTGATCGTTTTTTATGATCTTATGGTTTTTAGAGAACTACATTGGCGGGGCCTCCGGAGATCGTTATATCTACTCCTGCTTGTATACAGACATGCTTGTCAAATGGAGTTATTCAAGGGAAAGCTGTTCAAGATTCTCTGTCCATTCTCATTCTCGATGAGGTGGGTTAGTTTATGTTACATTGTTCCTCTTAAATTCTTTTAGTGGAAAGACTTTTTGCTGATGTGGTGAGATATGTAATGAGTTGCACTGTTTAAAATCTCAAAAGTTTTACTGTAAAGGTCCGGTTTTGTATGGTGATAGTCAACGGTTCATATCCAATATTAGGTAAAACTTACTAGATACAATAGACTCTGGTATCTGGCGAGGTTTATGACCCACCTTTAGTAGTGATAGTTACTTTTTGATTTCATATCTTTTCTCTTTCATTTGTGAATTTGAATGTTTGCATTAGAATTGGATTGTGTTTGATTGTATTCACCCGAAAGGACATGAGGTTGAGAATTATGTTTCTGTATCAGGCAGATCTTCTTTTGTCTTATGGATATGAAGATGATCTGAAAGCTCTTACATCTCATGTACCAAGACGTTGCCAGTGCCTTCTGATGTCTGCAACCTCAAGGTATGCTCGCCTTACTATATTCACATATATATGTCAAGCAAATTCTTGCTGATTCTTCCACTGTCGCCTATGCTGGTTTTCTCCAGCACAAAGTTCTTGATTGTTACCATCTTACTTCCCATCTTCCCCCCCCCCCAACCCCCCACATCTCAAGGTTTGGATATGAACTTTCTTGGTCGTGTTAATATGCAGTTCTGACGTTGAAAAGCTGAAGAAGCTTATTTTACACAATCCCTACATCCTGACTTTGCCT</genome_strand>
        <mrna_strand>CAAAACCCAAAACCCTCGCGTACCAGAGAATGAACAGAGAAGGAAGAGTTGAGAATGAGGAAGATGAAGAACAAACCTTCGAAGAATTGGGACTTGACCCTCGTCTAATCCGTGCTTTAACCAAGAAAACTATCGATAAACCAACTCCTATTCAGCGAGTTGCTATTCCTCTAATCCTC..................................................................................GAAGGGAAAGATGTGGTTGCTCGAGCTAAGACTGGTTCTGGAAAGACATTTGCTTATCTCCTTCCTTTACTTCACAAGCTTTTTACTCAGTCATCTTCAACAAAGAATCTTGCTCCTACTGCGTTGATTCTTGTACCTACAAGGGAATTGTGTCAACAG...................................................................................GTTTGTTCGGAGGCGAATTCGTTGATTGAACTATGTAGAGTGCAATTAAGGCTTGTCCAATTGACAAGTTCTATGTCTGTTTCTGAATTG...................................................................................................AGAACTACATTGGCGGGGCCTCCGGAGATCGTTATATCTACTCCTGCTTGTATACAGACATGCTTGTCAAATGGAGTTATTCAAGGGAAAGCTGTTCAAGATTCTCTGTCCATTCTCATTCTCGATGAG........................................................................................................................................................................................................................................................................................................................................................................GCAGATCTTCTTTTGTCTTATGGATATGAAGATGATCTGAAAGCTCTTACATCTCATGTACCAAGACGTTGCCAGTGCCTTCTGATGTCTGCAACCTCAAG................................................................................................................................................................................................TTCTGACGTTGAAAAGCTGAAGAAGCTTATTTTACACAATCCCTACATCCTGACTTTGCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E334158" ref_strand="+" ref_description="SGN-E334158 [cTOD-21-G18]">
      <seq>caaaacccaaaaccctcgcgtaccagagaatgaacagagaaggaagagttgagaatgaggaagatgaagaacaaaccttcgaagaattgggacttgaccctcgtctaatccgtgctttaaccaagaaaactatcgataaaccaactcctattcagcgagttgctattcctctaatcctcgaagggaaagatgtggttgctcgagctaagactggttctggaaagacatttgcttatctccttcctttacttcacaagctttttactcagtcatcttcaacaaagaatcttgctcctactgcgttgattcttgtacctacaagggaattgtgtcaacaggtttgttcggaggcgaattcgttgattgaactatgtagagtgcaattaaggcttgtccaattgacaagttctatgtctgtttctgaattgagaactacattggcggggcctccggagatcgttatatctactcctgcttgtatacagacatgcttgtcaaatggagttattcaagggaaagctgttcaagattctctgtccattctcattctcgatgaggcagatcttcttttgtcttatggatatgaagatgatctgaaagctcttacatctcatgtaccaagacgttgccagtgccttctgatgtctgcaacctcaagttctgacgtttgaaagctgaagaagcttattttacacaatccctacatcctga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="+" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="41960" stop="44086"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="42260" g_stop="42438" g_length="179"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="179" r_length="179" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="42439" i_stop="42520" i_length="82">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42521" g_stop="42679" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="180" r_stop="338" r_length="159" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42680" i_stop="42762" i_length="83">
            <donor d_prob="0.777" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="42763" g_stop="42852" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="339" r_stop="428" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="42853" i_stop="42951" i_length="99">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="42952" g_stop="43080" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="429" r_stop="557" r_length="129" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="43081" i_stop="43440" i_length="360">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.771" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="43441" g_stop="43541" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="558" r_stop="658" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="43542" i_stop="43733" i_length="192">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.932" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="43734" g_stop="43786" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="659" r_stop="711" r_length="53" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="+" ref_id="SGN-E334158" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>711</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E334158" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="42260" e_stop="42438"/>
          <exon e_start="42521" e_stop="42679"/>
          <exon e_start="42763" e_stop="42852"/>
          <exon e_start="42952" e_stop="43080"/>
          <exon e_start="43441" e_stop="43541"/>
          <exon e_start="43734" e_stop="43786"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAACCCAAAACCCTCGCGTACCAGAGAATGAACAGAGAAGGAAGAGTTGAGATTGAGGAAGATGAAGAACAAACCTTCGAAGAATTGGGACTTGACCCTCGTCTAATCCGTGCTTTAACCAAGAAAACTATCGATAAACCAACTCCTATTCAGCGAGTTGCTATTCCTCTAATCCTCGTAAGTTTACAATACTTTCATTCTCTTCGCAGTTTTGTTTGTTGAGCTGATTTCATTGTCTATGGCTACTTTTTTTTTTTAGGAAGGGAAAGATGTGGTTGCTCGAGCTAAGACTGGTTCTGGAAAGACATTTGCTTATCTCCTTCCTTTACTTCACAAGCTTTTTACTCAGTCATCTTCAACAAAGAATCTTGCTCCTACTGCGTTGATTCTTGTACCTACAAGGGAATTGTGTCAACAGGTTGAAACTTTTTGCTATTATTTTGGGGTTTTATTTTGTTTTGAGTTTGTGGGTTTATTTTAATTGTGTTTGTTGTTGTTCAGGTTTGTTCGGAGGCGAATTCGTTGATTGAACTATGTAGAGTGCAATTAAGGCTTGTCCAATTGACAAGTTCTATGTCTGTTTCTGAATTGGTTGGTTTCTTTTGTTCACAATTGTTTGCTGATTATGAAGTTTTAATCTTTATGGGTATGTGATAAAGTGATCGTTTTTTATGATCTTATGGTTTTTAGAGAACTACATTGGCGGGGCCTCCGGAGATCGTTATATCTACTCCTGCTTGTATACAGACATGCTTGTCAAATGGAGTTATTCAAGGGAAAGCTGTTCAAGATTCTCTGTCCATTCTCATTCTCGATGAGGTGGGTTAGTTTATGTTACATTGTTCCTCTTAAATTCTTTTAGTGGAAAGACTTTTTGCTGATGTGGTGAGATATGTAATGAGTTGCACTGTTTAAAATCTCAAAAGTTTTACTGTAAAGGTCCGGTTTTGTATGGTGATAGTCAACGGTTCATATCCAATATTAGGTAAAACTTACTAGATACAATAGACTCTGGTATCTGGCGAGGTTTATGACCCACCTTTAGTAGTGATAGTTACTTTTTGATTTCATATCTTTTCTCTTTCATTTGTGAATTTGAATGTTTGCATTAGAATTGGATTGTGTTTGATTGTATTCACCCGAAAGGACATGAGGTTGAGAATTATGTTTCTGTATCAGGCAGATCTTCTTTTGTCTTATGGATATGAAGATGATCTGAAAGCTCTTACATCTCATGTACCAAGACGTTGCCAGTGCCTTCTGATGTCTGCAACCTCAAGGTATGCTCGCCTTACTATATTCACATATATATGTCAAGCAAATTCTTGCTGATTCTTCCACTGTCGCCTATGCTGGTTTTCTCCAGCACAAAGTTCTTGATTGTTACCATCTTACTTCCCATCTTCCCCCCCCCCCAACCCCCCACATCTCAAGGTTTGGATATGAACTTTCTTGGTCGTGTTAATATGCAGTTCTGACGTTGAAAAGCTGAAGAAGCTTATTTTACACAATCCCTACATCCTGA</genome_strand>
        <mrna_strand>CAAAACCCAAAACCCTCGCGTACCAGAGAATGAACAGAGAAGGAAGAGTTGAGAATGAGGAAGATGAAGAACAAACCTTCGAAGAATTGGGACTTGACCCTCGTCTAATCCGTGCTTTAACCAAGAAAACTATCGATAAACCAACTCCTATTCAGCGAGTTGCTATTCCTCTAATCCTC..................................................................................GAAGGGAAAGATGTGGTTGCTCGAGCTAAGACTGGTTCTGGAAAGACATTTGCTTATCTCCTTCCTTTACTTCACAAGCTTTTTACTCAGTCATCTTCAACAAAGAATCTTGCTCCTACTGCGTTGATTCTTGTACCTACAAGGGAATTGTGTCAACAG...................................................................................GTTTGTTCGGAGGCGAATTCGTTGATTGAACTATGTAGAGTGCAATTAAGGCTTGTCCAATTGACAAGTTCTATGTCTGTTTCTGAATTG...................................................................................................AGAACTACATTGGCGGGGCCTCCGGAGATCGTTATATCTACTCCTGCTTGTATACAGACATGCTTGTCAAATGGAGTTATTCAAGGGAAAGCTGTTCAAGATTCTCTGTCCATTCTCATTCTCGATGAG........................................................................................................................................................................................................................................................................................................................................................................GCAGATCTTCTTTTGTCTTATGGATATGAAGATGATCTGAAAGCTCTTACATCTCATGTACCAAGACGTTGCCAGTGCCTTCTGATGTCTGCAACCTCAAG................................................................................................................................................................................................TTCTGACGTTTGAAAGCTGAAGAAGCTTATTTTACACAATCCCTACATCCTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E438834" ref_strand="+" ref_description="SGN-E438834 [cSTA-9-H20]">
      <seq>ccaaaaccctcgcctaccagagaatgaacaaagaaggaagagttgaggaggaggaagaagaagaacaaaccttcgaagaattgggacttgaccctcgtctaatccgtgctttaaccaagaaaactatcgataaaccaactccaattcagcgagttgctattcctctaatcctcgaagggaaagatgtggttgctcgagctaagactggttctggaaagacatttgcttatctccttcctttacttcacaagctttttactcagtcatcttcagtcaagaatcttgctcctactgcattgattcttgtacctacaagggaattgtgtcaacaggtttgttcggaggctaattcgttgattgaactatgtagagtgcaattaaggcttgtccaattgacaagttctatgtctgtttctgaattgagaactacgttggcggggcctccggaaattgttatatctactcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="+" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="41966" stop="43295"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="42266" g_stop="42438" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="173" r_length="173" r_score="0.960"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="42439" i_stop="42520" i_length="82">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42521" g_stop="42679" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="174" r_stop="332" r_length="159" r_score="0.975"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42680" i_stop="42762" i_length="83">
            <donor d_prob="0.777" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="42763" g_stop="42852" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="333" r_stop="422" r_length="90" r_score="0.989"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="42853" i_stop="42951" i_length="99">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.93"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="42952" g_stop="42995" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="423" r_stop="466" r_length="44" r_score="0.932"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="+" ref_id="SGN-E438834" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>466</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E438834" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="42266" e_stop="42438"/>
          <exon e_start="42521" e_stop="42679"/>
          <exon e_start="42763" e_stop="42852"/>
          <exon e_start="42952" e_stop="42995"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAAAACCCTCGCGTACCAGAGAATGAACAGAGAAGGAAGAGTTGAGATTGAGGAAGATGAAGAACAAACCTTCGAAGAATTGGGACTTGACCCTCGTCTAATCCGTGCTTTAACCAAGAAAACTATCGATAAACCAACTCCTATTCAGCGAGTTGCTATTCCTCTAATCCTCGTAAGTTTACAATACTTTCATTCTCTTCGCAGTTTTGTTTGTTGAGCTGATTTCATTGTCTATGGCTACTTTTTTTTTTTAGGAAGGGAAAGATGTGGTTGCTCGAGCTAAGACTGGTTCTGGAAAGACATTTGCTTATCTCCTTCCTTTACTTCACAAGCTTTTTACTCAGTCATCTTCAACAAAGAATCTTGCTCCTACTGCGTTGATTCTTGTACCTACAAGGGAATTGTGTCAACAGGTTGAAACTTTTTGCTATTATTTTGGGGTTTTATTTTGTTTTGAGTTTGTGGGTTTATTTTAATTGTGTTTGTTGTTGTTCAGGTTTGTTCGGAGGCGAATTCGTTGATTGAACTATGTAGAGTGCAATTAAGGCTTGTCCAATTGACAAGTTCTATGTCTGTTTCTGAATTGGTTGGTTTCTTTTGTTCACAATTGTTTGCTGATTATGAAGTTTTAATCTTTATGGGTATGTGATAAAGTGATCGTTTTTTATGATCTTATGGTTTTTAGAGAACTACATTGGCGGGGCCTCCGGAGATCGTTATATCTACTCC</genome_strand>
        <mrna_strand>CCAAAACCCTCGCCTACCAGAGAATGAACAAAGAAGGAAGAGTTGAGGAGGAGGAAGAAGAAGAACAAACCTTCGAAGAATTGGGACTTGACCCTCGTCTAATCCGTGCTTTAACCAAGAAAACTATCGATAAACCAACTCCAATTCAGCGAGTTGCTATTCCTCTAATCCTC..................................................................................GAAGGGAAAGATGTGGTTGCTCGAGCTAAGACTGGTTCTGGAAAGACATTTGCTTATCTCCTTCCTTTACTTCACAAGCTTTTTACTCAGTCATCTTCAGTCAAGAATCTTGCTCCTACTGCATTGATTCTTGTACCTACAAGGGAATTGTGTCAACAG...................................................................................GTTTGTTCGGAGGCTAATTCGTTGATTGAACTATGTAGAGTGCAATTAAGGCTTGTCCAATTGACAAGTTCTATGTCTGTTTCTGAATTG...................................................................................................AGAACTACGTTGGCGGGGCCTCCGGAAATTGTTATATCTACTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E355606" ref_strand="+" ref_description="SGN-E355606 [cLHT-1-C22]">
      <seq>aaaaccctcgcgtaccagagaatgaacagggaaggaagagttgagaatgaggaagatgaagaacaaaccttcgaagaattgggacttgaccctcgtctaatccgtgctttaaccaagaaaactatcgataaaccaactcctattcagcgagttgctattcctctaatcctcgaagggaaagatgtggttgctcgagctaagactggttctggaaagacatttgcttatctccttcctttacttcacaagctttttactcagtcatcttcaacaaagaatcttgctcctactgcattgattcttgtacctacaagggaattgtgtcaacaggtttgttcggaggcgaattcgttgattgaactatgtagagtgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="+" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="41968" stop="43105"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="42268" g_stop="42438" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="171" r_length="171" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="42439" i_stop="42520" i_length="82">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42521" g_stop="42679" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="172" r_stop="330" r_length="159" r_score="0.994"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42680" i_stop="42762" i_length="83">
            <donor d_prob="0.777" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="42763" g_stop="42805" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="331" r_stop="373" r_length="43" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="+" ref_id="SGN-E355606" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>373</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E355606" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="42268" e_stop="42438"/>
          <exon e_start="42521" e_stop="42679"/>
          <exon e_start="42763" e_stop="42805"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAACCCTCGCGTACCAGAGAATGAACAGAGAAGGAAGAGTTGAGATTGAGGAAGATGAAGAACAAACCTTCGAAGAATTGGGACTTGACCCTCGTCTAATCCGTGCTTTAACCAAGAAAACTATCGATAAACCAACTCCTATTCAGCGAGTTGCTATTCCTCTAATCCTCGTAAGTTTACAATACTTTCATTCTCTTCGCAGTTTTGTTTGTTGAGCTGATTTCATTGTCTATGGCTACTTTTTTTTTTTAGGAAGGGAAAGATGTGGTTGCTCGAGCTAAGACTGGTTCTGGAAAGACATTTGCTTATCTCCTTCCTTTACTTCACAAGCTTTTTACTCAGTCATCTTCAACAAAGAATCTTGCTCCTACTGCGTTGATTCTTGTACCTACAAGGGAATTGTGTCAACAGGTTGAAACTTTTTGCTATTATTTTGGGGTTTTATTTTGTTTTGAGTTTGTGGGTTTATTTTAATTGTGTTTGTTGTTGTTCAGGTTTGTTCGGAGGCGAATTCGTTGATTGAACTATGTAGAGTGC</genome_strand>
        <mrna_strand>AAAACCCTCGCGTACCAGAGAATGAACAGGGAAGGAAGAGTTGAGAATGAGGAAGATGAAGAACAAACCTTCGAAGAATTGGGACTTGACCCTCGTCTAATCCGTGCTTTAACCAAGAAAACTATCGATAAACCAACTCCTATTCAGCGAGTTGCTATTCCTCTAATCCTC..................................................................................GAAGGGAAAGATGTGGTTGCTCGAGCTAAGACTGGTTCTGGAAAGACATTTGCTTATCTCCTTCCTTTACTTCACAAGCTTTTTACTCAGTCATCTTCAACAAAGAATCTTGCTCCTACTGCATTGATTCTTGTACCTACAAGGGAATTGTGTCAACAG...................................................................................GTTTGTTCGGAGGCGAATTCGTTGATTGAACTATGTAGAGTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E327954" ref_strand="+" ref_description="SGN-E327954 [cTOC-22-P17]">
      <seq>agagaaggaagagttgagaatgaggaagatgaagaacaaaccttcgaagaattgggacttgaccctcgtctaatccgtgctttaaccaagaaaactatcgataaaccaactcctattcagcgagttgctattcctctaatcctcgaagggaaagatgtggttgctcgagctaagactggttctggaaagacatttgcttatctccttcctttacttcacaagctttttactcagtcatcttcaacaaagaatcttgctcctactgcgttgattcttgtacctacaagggaattgtgtcaacaggtttgttcggaggcgaattcgttgattgaactatgtagagtgcaattaaggcttgtccaattgacaagttctatgtctgtttctgaattgagaactacattggcggggcctccggagatcgttatatctactcctgcttgtatacagacatgcttgtcaaatggagttattcaagggaaagctgttcaagattctctgtccattctcattctcgatgaggcagatcttcttttgtcttatggatatgaagatgatctgaaagctcttacatctcatgtaccaagacgttgccagtgccttctgatgtctgcaaccctcagttctgnacgtgaaaagctgaagaagcttattttacacaatccctacatcctgactttgccctgagtgggagaaacaaaggatgacattatcccaaaaaatgtacagcaatttta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="+" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="41995" stop="44147"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="42295" g_stop="42438" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="144" r_length="144" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="42439" i_stop="42520" i_length="82">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42521" g_stop="42679" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="145" r_stop="303" r_length="159" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42680" i_stop="42762" i_length="83">
            <donor d_prob="0.777" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="42763" g_stop="42852" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="304" r_stop="393" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="42853" i_stop="42951" i_length="99">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="42952" g_stop="43080" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="394" r_stop="522" r_length="129" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="43081" i_stop="43440" i_length="360">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.771" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="43441" g_stop="43541" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="523" r_stop="623" r_length="101" r_score="0.970"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="43542" i_stop="43733" i_length="192">
            <donor d_prob="0.999" d_score="0.94"/>
            <acceptor a_prob="0.932" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="43734" g_stop="43847" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="624" r_stop="737" r_length="114" r_score="0.939"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="+" ref_id="SGN-E327954" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>737</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E327954" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="42295" e_stop="42438"/>
          <exon e_start="42521" e_stop="42679"/>
          <exon e_start="42763" e_stop="42852"/>
          <exon e_start="42952" e_stop="43080"/>
          <exon e_start="43441" e_stop="43541"/>
          <exon e_start="43734" e_stop="43847"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGAAGGAAGAGTTGAGATTGAGGAAGATGAAGAACAAACCTTCGAAGAATTGGGACTTGACCCTCGTCTAATCCGTGCTTTAACCAAGAAAACTATCGATAAACCAACTCCTATTCAGCGAGTTGCTATTCCTCTAATCCTCGTAAGTTTACAATACTTTCATTCTCTTCGCAGTTTTGTTTGTTGAGCTGATTTCATTGTCTATGGCTACTTTTTTTTTTTAGGAAGGGAAAGATGTGGTTGCTCGAGCTAAGACTGGTTCTGGAAAGACATTTGCTTATCTCCTTCCTTTACTTCACAAGCTTTTTACTCAGTCATCTTCAACAAAGAATCTTGCTCCTACTGCGTTGATTCTTGTACCTACAAGGGAATTGTGTCAACAGGTTGAAACTTTTTGCTATTATTTTGGGGTTTTATTTTGTTTTGAGTTTGTGGGTTTATTTTAATTGTGTTTGTTGTTGTTCAGGTTTGTTCGGAGGCGAATTCGTTGATTGAACTATGTAGAGTGCAATTAAGGCTTGTCCAATTGACAAGTTCTATGTCTGTTTCTGAATTGGTTGGTTTCTTTTGTTCACAATTGTTTGCTGATTATGAAGTTTTAATCTTTATGGGTATGTGATAAAGTGATCGTTTTTTATGATCTTATGGTTTTTAGAGAACTACATTGGCGGGGCCTCCGGAGATCGTTATATCTACTCCTGCTTGTATACAGACATGCTTGTCAAATGGAGTTATTCAAGGGAAAGCTGTTCAAGATTCTCTGTCCATTCTCATTCTCGATGAGGTGGGTTAGTTTATGTTACATTGTTCCTCTTAAATTCTTTTAGTGGAAAGACTTTTTGCTGATGTGGTGAGATATGTAATGAGTTGCACTGTTTAAAATCTCAAAAGTTTTACTGTAAAGGTCCGGTTTTGTATGGTGATAGTCAACGGTTCATATCCAATATTAGGTAAAACTTACTAGATACAATAGACTCTGGTATCTGGCGAGGTTTATGACCCACCTTTAGTAGTGATAGTTACTTTTTGATTTCATATCTTTTCTCTTTCATTTGTGAATTTGAATGTTTGCATTAGAATTGGATTGTGTTTGATTGTATTCACCCGAAAGGACATGAGGTTGAGAATTATGTTTCTGTATCAGGCAGATCTTCTTTTGTCTTATGGATATGAAGATGATCTGAAAGCTCTTACATCTCATGTACCAAGACGTTGCCAGTGCCTTCTGATGTCTGCAACCTCAAGGTATGCTCGCCTTACTATATTCACATATATATGTCAAGCAAATTCTTGCTGATTCTTCCACTGTCGCCTATGCTGGTTTTCTCCAGCACAAAGTTCTTGATTGTTACCATCTTACTTCCCATCTTCCCCCCCCCCCAACCCCCCACATCTCAAGGTTTGGATATGAACTTTCTTGGTCGTGTTAATATGCAGTTCTG-ACGTTGAAAAGCTGAAGAAGCTTATTTTACACAATCCCTACATCCTGACTTTGCCTGAGGTGGGAGAAACAAAGGATGACATTATCCCAAAAAATGTACAGCAATTTTA</genome_strand>
        <mrna_strand>AGAGAAGGAAGAGTTGAGAATGAGGAAGATGAAGAACAAACCTTCGAAGAATTGGGACTTGACCCTCGTCTAATCCGTGCTTTAACCAAGAAAACTATCGATAAACCAACTCCTATTCAGCGAGTTGCTATTCCTCTAATCCTC..................................................................................GAAGGGAAAGATGTGGTTGCTCGAGCTAAGACTGGTTCTGGAAAGACATTTGCTTATCTCCTTCCTTTACTTCACAAGCTTTTTACTCAGTCATCTTCAACAAAGAATCTTGCTCCTACTGCGTTGATTCTTGTACCTACAAGGGAATTGTGTCAACAG...................................................................................GTTTGTTCGGAGGCGAATTCGTTGATTGAACTATGTAGAGTGCAATTAAGGCTTGTCCAATTGACAAGTTCTATGTCTGTTTCTGAATTG...................................................................................................AGAACTACATTGGCGGGGCCTCCGGAGATCGTTATATCTACTCCTGCTTGTATACAGACATGCTTGTCAAATGGAGTTATTCAAGGGAAAGCTGTTCAAGATTCTCTGTCCATTCTCATTCTCGATGAG........................................................................................................................................................................................................................................................................................................................................................................GCAGATCTTCTTTTGTCTTATGGATATGAAGATGATCTGAAAGCTCTTACATCTCATGTACCAAGACGTTGCCAGTGCCTTCTGATGTCTGCAACCCTCAG................................................................................................................................................................................................TTCTGNACG-TGAAAAGCTGAAGAAGCTTATTTTACACAATCCCTACATCCTGACTTTGCCCTGAGTGGGAGAAACAAAGGATGACATTATCCCAAAAAATGTACAGCAATTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E324664" ref_strand="+" ref_description="SGN-E324664 [cTOC-9-L13]">
      <seq>gagaaggaagagttgagaatgaggaagatgaagaacaaaccttcgaagaattgggacttgaccctcgtctaatccgtgctttaaccaagaaaactatcgataaaccaactcctattcagcgagttgctattcctctaatcctcgaagggaaagatgtggttgctcgagctaagactggttctggaaagacatttgcttatctccttcctttacttcacaagctttttactcagtcatcttcaacaaagaatcttgctcctactgcgttgattcttgtacctacaagggaattgtgtcaacaggtttgttcggaggcgaattcgttgattgaactatgtagagtgcaattaaggcttgtccaattgacaagttctatgtctgtttctgaattgagaactacattggcggggcctccggagatcgttatatctactcctgcttgtatacagacatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="+" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="41996" stop="43314"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="42296" g_stop="42438" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="143" r_length="143" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="42439" i_stop="42520" i_length="82">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42521" g_stop="42679" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="144" r_stop="302" r_length="159" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42680" i_stop="42762" i_length="83">
            <donor d_prob="0.777" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="42763" g_stop="42852" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="303" r_stop="392" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="42853" i_stop="42951" i_length="99">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="42952" g_stop="43012" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="393" r_stop="453" r_length="61" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="+" ref_id="SGN-E324664" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>453</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E324664" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="42296" e_stop="42438"/>
          <exon e_start="42521" e_stop="42679"/>
          <exon e_start="42763" e_stop="42852"/>
          <exon e_start="42952" e_stop="43012"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGAAGGAAGAGTTGAGATTGAGGAAGATGAAGAACAAACCTTCGAAGAATTGGGACTTGACCCTCGTCTAATCCGTGCTTTAACCAAGAAAACTATCGATAAACCAACTCCTATTCAGCGAGTTGCTATTCCTCTAATCCTCGTAAGTTTACAATACTTTCATTCTCTTCGCAGTTTTGTTTGTTGAGCTGATTTCATTGTCTATGGCTACTTTTTTTTTTTAGGAAGGGAAAGATGTGGTTGCTCGAGCTAAGACTGGTTCTGGAAAGACATTTGCTTATCTCCTTCCTTTACTTCACAAGCTTTTTACTCAGTCATCTTCAACAAAGAATCTTGCTCCTACTGCGTTGATTCTTGTACCTACAAGGGAATTGTGTCAACAGGTTGAAACTTTTTGCTATTATTTTGGGGTTTTATTTTGTTTTGAGTTTGTGGGTTTATTTTAATTGTGTTTGTTGTTGTTCAGGTTTGTTCGGAGGCGAATTCGTTGATTGAACTATGTAGAGTGCAATTAAGGCTTGTCCAATTGACAAGTTCTATGTCTGTTTCTGAATTGGTTGGTTTCTTTTGTTCACAATTGTTTGCTGATTATGAAGTTTTAATCTTTATGGGTATGTGATAAAGTGATCGTTTTTTATGATCTTATGGTTTTTAGAGAACTACATTGGCGGGGCCTCCGGAGATCGTTATATCTACTCCTGCTTGTATACAGACAT</genome_strand>
        <mrna_strand>GAGAAGGAAGAGTTGAGAATGAGGAAGATGAAGAACAAACCTTCGAAGAATTGGGACTTGACCCTCGTCTAATCCGTGCTTTAACCAAGAAAACTATCGATAAACCAACTCCTATTCAGCGAGTTGCTATTCCTCTAATCCTC..................................................................................GAAGGGAAAGATGTGGTTGCTCGAGCTAAGACTGGTTCTGGAAAGACATTTGCTTATCTCCTTCCTTTACTTCACAAGCTTTTTACTCAGTCATCTTCAACAAAGAATCTTGCTCCTACTGCGTTGATTCTTGTACCTACAAGGGAATTGTGTCAACAG...................................................................................GTTTGTTCGGAGGCGAATTCGTTGATTGAACTATGTAGAGTGCAATTAAGGCTTGTCCAATTGACAAGTTCTATGTCTGTTTCTGAATTG...................................................................................................AGAACTACATTGGCGGGGCCTCCGGAGATCGTTATATCTACTCCTGCTTGTATACAGACAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E475141" ref_strand="+" ref_description="SGN-E475141 [cSTB-39-I20]">
      <seq>aattgggacttgaccctcgtctaatccgtgctttaaccaagaaaactatcgataaaccaactccaattcagcgagttgctattcctctaatcctcgaagggaaagatgtggttgctcgagctaagactggttctggaaaaacatttgcttatctccttcctttacttcacaagctttttactcagtcatcttcagccaagaatcttgctcctactgcattgattctcgtacctacaagggaattgtgtcaacaggtttgttcggaggctaattcgttgattgaactatgtagagtgcaattaaggcttgtccaattgacaagttctatgtctgtttctgaattgagaactacgttggcggggcctccggaaattgttatttctactcctgcttgtatacagacatgcttgtcaaatggagttattcaagcgaaagctgttcaagattctctgtccattctcattctcgatgaggcagatcttcttttgtcatatggatatgaagatgatctgaaagctcttacatctcatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="+" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="42044" stop="43799"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="42344" g_stop="42438" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="95" r_length="95" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="42439" i_stop="42520" i_length="82">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42521" g_stop="42679" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="96" r_stop="254" r_length="159" r_score="0.969"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42680" i_stop="42762" i_length="83">
            <donor d_prob="0.777" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="42763" g_stop="42852" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="255" r_stop="344" r_length="90" r_score="0.989"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="42853" i_stop="42951" i_length="99">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="42952" g_stop="43080" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="345" r_stop="473" r_length="129" r_score="0.961"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="43081" i_stop="43440" i_length="360">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.771" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="43441" g_stop="43499" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="474" r_stop="532" r_length="59" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="+" ref_id="SGN-E475141" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>532</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E475141" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="42344" e_stop="42438"/>
          <exon e_start="42521" e_stop="42679"/>
          <exon e_start="42763" e_stop="42852"/>
          <exon e_start="42952" e_stop="43080"/>
          <exon e_start="43441" e_stop="43499"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTGGGACTTGACCCTCGTCTAATCCGTGCTTTAACCAAGAAAACTATCGATAAACCAACTCCTATTCAGCGAGTTGCTATTCCTCTAATCCTCGTAAGTTTACAATACTTTCATTCTCTTCGCAGTTTTGTTTGTTGAGCTGATTTCATTGTCTATGGCTACTTTTTTTTTTTAGGAAGGGAAAGATGTGGTTGCTCGAGCTAAGACTGGTTCTGGAAAGACATTTGCTTATCTCCTTCCTTTACTTCACAAGCTTTTTACTCAGTCATCTTCAACAAAGAATCTTGCTCCTACTGCGTTGATTCTTGTACCTACAAGGGAATTGTGTCAACAGGTTGAAACTTTTTGCTATTATTTTGGGGTTTTATTTTGTTTTGAGTTTGTGGGTTTATTTTAATTGTGTTTGTTGTTGTTCAGGTTTGTTCGGAGGCGAATTCGTTGATTGAACTATGTAGAGTGCAATTAAGGCTTGTCCAATTGACAAGTTCTATGTCTGTTTCTGAATTGGTTGGTTTCTTTTGTTCACAATTGTTTGCTGATTATGAAGTTTTAATCTTTATGGGTATGTGATAAAGTGATCGTTTTTTATGATCTTATGGTTTTTAGAGAACTACATTGGCGGGGCCTCCGGAGATCGTTATATCTACTCCTGCTTGTATACAGACATGCTTGTCAAATGGAGTTATTCAAGGGAAAGCTGTTCAAGATTCTCTGTCCATTCTCATTCTCGATGAGGTGGGTTAGTTTATGTTACATTGTTCCTCTTAAATTCTTTTAGTGGAAAGACTTTTTGCTGATGTGGTGAGATATGTAATGAGTTGCACTGTTTAAAATCTCAAAAGTTTTACTGTAAAGGTCCGGTTTTGTATGGTGATAGTCAACGGTTCATATCCAATATTAGGTAAAACTTACTAGATACAATAGACTCTGGTATCTGGCGAGGTTTATGACCCACCTTTAGTAGTGATAGTTACTTTTTGATTTCATATCTTTTCTCTTTCATTTGTGAATTTGAATGTTTGCATTAGAATTGGATTGTGTTTGATTGTATTCACCCGAAAGGACATGAGGTTGAGAATTATGTTTCTGTATCAGGCAGATCTTCTTTTGTCTTATGGATATGAAGATGATCTGAAAGCTCTTACATCTCATGT</genome_strand>
        <mrna_strand>AATTGGGACTTGACCCTCGTCTAATCCGTGCTTTAACCAAGAAAACTATCGATAAACCAACTCCAATTCAGCGAGTTGCTATTCCTCTAATCCTC..................................................................................GAAGGGAAAGATGTGGTTGCTCGAGCTAAGACTGGTTCTGGAAAAACATTTGCTTATCTCCTTCCTTTACTTCACAAGCTTTTTACTCAGTCATCTTCAGCCAAGAATCTTGCTCCTACTGCATTGATTCTCGTACCTACAAGGGAATTGTGTCAACAG...................................................................................GTTTGTTCGGAGGCTAATTCGTTGATTGAACTATGTAGAGTGCAATTAAGGCTTGTCCAATTGACAAGTTCTATGTCTGTTTCTGAATTG...................................................................................................AGAACTACGTTGGCGGGGCCTCCGGAAATTGTTATTTCTACTCCTGCTTGTATACAGACATGCTTGTCAAATGGAGTTATTCAAGCGAAAGCTGTTCAAGATTCTCTGTCCATTCTCATTCTCGATGAG........................................................................................................................................................................................................................................................................................................................................................................GCAGATCTTCTTTTGTCATATGGATATGAAGATGATCTGAAAGCTCTTACATCTCATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E372672" ref_strand="+" ref_description="SGN-E372672 [TUS-31-I7](-)">
      <seq>agctcttacatctcatgtaccaagacgttgccagtgccttctgatgtctgcaacctcaagttctgacgttgaaaagctgaagaagcttattttacacaatccctacatcctgactttgcctgaggtgggagaaacaaaggatgacattatcccaaaaaatgtacagcaattttatatttcttgtgctgctcgtgataagcttgtccatgtccttgccctcttgaagcttgagttggtccagaaaaaagtcttgatatttacaaattcaattgacacgagttttagactcaaactattctttgagcagtttgggatcaagtctgcagttttaaatgccgagctgcctcagagttctcgtctacacatccttgaggaatttaatgctgggctatttgattacttgattgcgactgatgaaagtcaatcagaaggaaaggaaaaagttgatgatcaaaatggcagtgagcgaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="+" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="43182" stop="45969"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43482" g_stop="43541" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="60" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="43542" i_stop="43733" i_length="192">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.932" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="43734" g_stop="43848" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="61" r_stop="175" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="43849" i_stop="44392" i_length="544">
            <donor d_prob="0.833" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="44393" g_stop="44524" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="176" r_stop="307" r_length="132" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="44525" i_stop="45379" i_length="855">
            <donor d_prob="0.896" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="45380" g_stop="45445" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="308" r_stop="373" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="45446" i_stop="45567" i_length="122">
            <donor d_prob="0.896" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="45568" g_stop="45671" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="374" r_stop="477" r_length="104" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="+" ref_id="SGN-E372672" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>477</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E372672" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="43482" e_stop="43541"/>
          <exon e_start="43734" e_stop="43848"/>
          <exon e_start="44393" e_stop="44524"/>
          <exon e_start="45380" e_stop="45445"/>
          <exon e_start="45568" e_stop="45671"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCTCTTACATCTCATGTACCAAGACGTTGCCAGTGCCTTCTGATGTCTGCAACCTCAAGGTATGCTCGCCTTACTATATTCACATATATATGTCAAGCAAATTCTTGCTGATTCTTCCACTGTCGCCTATGCTGGTTTTCTCCAGCACAAAGTTCTTGATTGTTACCATCTTACTTCCCATCTTCCCCCCCCCCCAACCCCCCACATCTCAAGGTTTGGATATGAACTTTCTTGGTCGTGTTAATATGCAGTTCTGACGTTGAAAAGCTGAAGAAGCTTATTTTACACAATCCCTACATCCTGACTTTGCCTGAGGTGGGAGAAACAAAGGATGACATTATCCCAAAAAATGTACAGCAATTTTATGTAAGTATACACCTTCAATAGAATAACTGCTTTAGTAGTCTGTCCTCTCTTCAACACTTATTCAGTGAGGGAGTTTTGGTGCCGTCTTGGTACTTTATATAAATATGTTTAATTTGATAGAGTGATCCTCATACTTTTGGTTTCTGTAATACCTGACTAAGAAGCTGTATCTTTTGTTCTAAGGTGTGAATTTAGGAGTCATCTAAAATGGTAAATTATATGTTCAATCGTCACACGCTTTTCAACCTCTTGTGATGGATAAGTGCCACATTATGACACTACCTTCTAGTAGGCAGAGGCATTTCCCAGGGCAGGACACTTTTGTTTTAGACGTCTTATTACAACAACAAATATACACCTCAACAACTGTGTATTGTTTGTGTTCTATGCTATTGTTTTCTCTTATAGTTTCGTGTCTCTAACTACCACTTCTACTGTTTGTTCAGATTTCTTATAGTTTCTTGTCTCTAACGACCACTTCTATTGTTTGTTCAGATTTCTTATAGTTTTGTGTCTCTAACAACAACTTCTATTGTTTGTTCAGATTTCTTGTGCTGCTCGTGATAAGCTTGTCCATGTCCTTGCCCTCTTGAAGCTTGAGTTGGTCCAGAAAAAAGTCTTGATATTTACAAATTCAATTGACACGAGTTTTAGACTCAAACTATTCTTTGAGCAGGTACATCCATGTACATGATGTCACTAATATCATAGGACATGTGATCAATTTATAAATGTTGTTCTATGTAAATGTCATACTTATCTTATGAATACCTCTATTAGAAGCACCAAAACATCTTTGCCACTTGAAACTTCTTTGTTCTTCTCTTATTGTTATTATAATTATTATATTATTACTTTTTTGTTTTATGAAAGCACATCTTTAGGAATTGTTGAAGTTAGTTCTGTTATACCTCCCGGTCTATGTAGATGACTAGATGATGCAGCCCATAGAGGGAGTGCTTTTTGTTTGTTTGTGCTCAATCATAGTTGAAAGTTATAGGGAGTCGTGGATCCGCTGGATGTGCAAAAGTGTAGTTTTGGCTTGTACAAAATTCAATAGCAACATGTTTGGCCAATATTCTAAAATCAGCTTATTTTGAGAAGTGCTTTTCAAGAAACTACCTTTGGTGAAAAGTCGTTTGTATTTGGTTAATCAATTTAAAAGCACTTCTGATTAGCAGCTAGTGTTTGACCAAGCTTTCAAAAAGTGCTTCTAAGTGTATTTTCTCATTCAAAAAAGTACTTTAGGTAAAAAAAATAATTTTTCTCAGCATTAGTAAAGCACTTATTTTCTCCCTAGAAGCTTGGCTAAACACCTCCATTTTTAAAGATAAGATCTTTCAGTGTTCCCAAAATCTTGGCCAAACTGGCTGCAGGTCACTATATTATCTATTTTCTATAAGGCTACATTTATGACCTGTAATCTTCTGGGTGCTTATAGGTTATTGGTCTATGTTTCCGATGCTATACTTACTGCCTGCCTGAGGTGTTCCTGATAGTATTTTTGATATCCTGGTTAATCATTTTGCAGTTTGGGATCAAGTCTGCAGTTTTAAATGCCGAGCTGCCTCAGAGTTCTCGTCTACACATCCTTGAGGTCTGTCATATGAGTGTAGAATGCCAAGAAATGCACACCTGTTGTATGGCTTTTGTTATAGTTCAACTCTTCTTGTGAAGTCTACTATTGCACTAGTCTCATAATTTTCTTCTTCTGAGCAGGAATTTAATGCTGGGCTATTTGATTACTTGATTGCGACTGATGAAAGTCAATCAGAAGGAAAGGAAAAAGTTGATGATCAAAATGGCAGTGAGCGAAAAAAATC</genome_strand>
        <mrna_strand>AGCTCTTACATCTCATGTACCAAGACGTTGCCAGTGCCTTCTGATGTCTGCAACCTCAAG................................................................................................................................................................................................TTCTGACGTTGAAAAGCTGAAGAAGCTTATTTTACACAATCCCTACATCCTGACTTTGCCTGAGGTGGGAGAAACAAAGGATGACATTATCCCAAAAAATGTACAGCAATTTTAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCTTGTGCTGCTCGTGATAAGCTTGTCCATGTCCTTGCCCTCTTGAAGCTTGAGTTGGTCCAGAAAAAAGTCTTGATATTTACAAATTCAATTGACACGAGTTTTAGACTCAAACTATTCTTTGAGCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGGATCAAGTCTGCAGTTTTAAATGCCGAGCTGCCTCAGAGTTCTCGTCTACACATCCTTGAG..........................................................................................................................GAATTTAATGCTGGGCTATTTGATTACTTGATTGCGACTGATGAAAGTCAATCAGAAGGAAAGGAAAAAGTTGATGATCAAAATGGCAGTGAGCGAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E290635" ref_strand="+" ref_description="SGN-E290635 [cLES-20-N14]">
      <seq>gctcttacatctcatgtaccaagacgttgccagtgccttctgatgtctgcaacctcaagttctgacgttgaaaagctgaagaagcttattttacacaatccctacatcctgactttgcctgaggtgggagaaacaaaggatgacattatcccaaaaaatgtacagcaattttatatttcttgtgctgctcgtgataagcttgtccatgtccttgccctcttgaagcttgagttggtccagaaaaaagtcttgatatttacaaattcaattgacacgagttttagactcaaactattctttgagcagtttgggatcaagtctgcagttttaaatgccgagctgcctcagagttctcgtctacacatccttgaggaatttaatgctgggctatttgattacttgattgcgactgatgaaagtcaatcagaaggaaaggaaaaagttgatgatcaaaatggcagtgagcgaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="+" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="43183" stop="45969"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43483" g_stop="43541" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="59" r_length="59" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="43542" i_stop="43733" i_length="192">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.932" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="43734" g_stop="43848" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="60" r_stop="174" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="43849" i_stop="44392" i_length="544">
            <donor d_prob="0.833" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="44393" g_stop="44524" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="175" r_stop="306" r_length="132" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="44525" i_stop="45379" i_length="855">
            <donor d_prob="0.896" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="45380" g_stop="45445" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="307" r_stop="372" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="45446" i_stop="45567" i_length="122">
            <donor d_prob="0.896" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="45568" g_stop="45672" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="373" r_stop="477" r_length="105" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="+" ref_id="SGN-E290635" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>477</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E290635" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="43483" e_stop="43541"/>
          <exon e_start="43734" e_stop="43848"/>
          <exon e_start="44393" e_stop="44524"/>
          <exon e_start="45380" e_stop="45445"/>
          <exon e_start="45568" e_stop="45672"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTCTTACATCTCATGTACCAAGACGTTGCCAGTGCCTTCTGATGTCTGCAACCTCAAGGTATGCTCGCCTTACTATATTCACATATATATGTCAAGCAAATTCTTGCTGATTCTTCCACTGTCGCCTATGCTGGTTTTCTCCAGCACAAAGTTCTTGATTGTTACCATCTTACTTCCCATCTTCCCCCCCCCCCAACCCCCCACATCTCAAGGTTTGGATATGAACTTTCTTGGTCGTGTTAATATGCAGTTCTGACGTTGAAAAGCTGAAGAAGCTTATTTTACACAATCCCTACATCCTGACTTTGCCTGAGGTGGGAGAAACAAAGGATGACATTATCCCAAAAAATGTACAGCAATTTTATGTAAGTATACACCTTCAATAGAATAACTGCTTTAGTAGTCTGTCCTCTCTTCAACACTTATTCAGTGAGGGAGTTTTGGTGCCGTCTTGGTACTTTATATAAATATGTTTAATTTGATAGAGTGATCCTCATACTTTTGGTTTCTGTAATACCTGACTAAGAAGCTGTATCTTTTGTTCTAAGGTGTGAATTTAGGAGTCATCTAAAATGGTAAATTATATGTTCAATCGTCACACGCTTTTCAACCTCTTGTGATGGATAAGTGCCACATTATGACACTACCTTCTAGTAGGCAGAGGCATTTCCCAGGGCAGGACACTTTTGTTTTAGACGTCTTATTACAACAACAAATATACACCTCAACAACTGTGTATTGTTTGTGTTCTATGCTATTGTTTTCTCTTATAGTTTCGTGTCTCTAACTACCACTTCTACTGTTTGTTCAGATTTCTTATAGTTTCTTGTCTCTAACGACCACTTCTATTGTTTGTTCAGATTTCTTATAGTTTTGTGTCTCTAACAACAACTTCTATTGTTTGTTCAGATTTCTTGTGCTGCTCGTGATAAGCTTGTCCATGTCCTTGCCCTCTTGAAGCTTGAGTTGGTCCAGAAAAAAGTCTTGATATTTACAAATTCAATTGACACGAGTTTTAGACTCAAACTATTCTTTGAGCAGGTACATCCATGTACATGATGTCACTAATATCATAGGACATGTGATCAATTTATAAATGTTGTTCTATGTAAATGTCATACTTATCTTATGAATACCTCTATTAGAAGCACCAAAACATCTTTGCCACTTGAAACTTCTTTGTTCTTCTCTTATTGTTATTATAATTATTATATTATTACTTTTTTGTTTTATGAAAGCACATCTTTAGGAATTGTTGAAGTTAGTTCTGTTATACCTCCCGGTCTATGTAGATGACTAGATGATGCAGCCCATAGAGGGAGTGCTTTTTGTTTGTTTGTGCTCAATCATAGTTGAAAGTTATAGGGAGTCGTGGATCCGCTGGATGTGCAAAAGTGTAGTTTTGGCTTGTACAAAATTCAATAGCAACATGTTTGGCCAATATTCTAAAATCAGCTTATTTTGAGAAGTGCTTTTCAAGAAACTACCTTTGGTGAAAAGTCGTTTGTATTTGGTTAATCAATTTAAAAGCACTTCTGATTAGCAGCTAGTGTTTGACCAAGCTTTCAAAAAGTGCTTCTAAGTGTATTTTCTCATTCAAAAAAGTACTTTAGGTAAAAAAAATAATTTTTCTCAGCATTAGTAAAGCACTTATTTTCTCCCTAGAAGCTTGGCTAAACACCTCCATTTTTAAAGATAAGATCTTTCAGTGTTCCCAAAATCTTGGCCAAACTGGCTGCAGGTCACTATATTATCTATTTTCTATAAGGCTACATTTATGACCTGTAATCTTCTGGGTGCTTATAGGTTATTGGTCTATGTTTCCGATGCTATACTTACTGCCTGCCTGAGGTGTTCCTGATAGTATTTTTGATATCCTGGTTAATCATTTTGCAGTTTGGGATCAAGTCTGCAGTTTTAAATGCCGAGCTGCCTCAGAGTTCTCGTCTACACATCCTTGAGGTCTGTCATATGAGTGTAGAATGCCAAGAAATGCACACCTGTTGTATGGCTTTTGTTATAGTTCAACTCTTCTTGTGAAGTCTACTATTGCACTAGTCTCATAATTTTCTTCTTCTGAGCAGGAATTTAATGCTGGGCTATTTGATTACTTGATTGCGACTGATGAAAGTCAATCAGAAGGAAAGGAAAAAGTTGATGATCAAAATGGCAGTGAGCGAAAAAAATCA</genome_strand>
        <mrna_strand>GCTCTTACATCTCATGTACCAAGACGTTGCCAGTGCCTTCTGATGTCTGCAACCTCAAG................................................................................................................................................................................................TTCTGACGTTGAAAAGCTGAAGAAGCTTATTTTACACAATCCCTACATCCTGACTTTGCCTGAGGTGGGAGAAACAAAGGATGACATTATCCCAAAAAATGTACAGCAATTTTAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCTTGTGCTGCTCGTGATAAGCTTGTCCATGTCCTTGCCCTCTTGAAGCTTGAGTTGGTCCAGAAAAAAGTCTTGATATTTACAAATTCAATTGACACGAGTTTTAGACTCAAACTATTCTTTGAGCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGGATCAAGTCTGCAGTTTTAAATGCCGAGCTGCCTCAGAGTTCTCGTCTACACATCCTTGAG..........................................................................................................................GAATTTAATGCTGGGCTATTTGATTACTTGATTGCGACTGATGAAAGTCAATCAGAAGGAAAGGAAAAAGTTGATGATCAAAATGGCAGTGAGCGAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E372673" ref_strand="+" ref_description="SGN-E372673 [TUS-31-I7]">
      <seq>gctcttacatctcatgtaccaagacgttgccagtgccttctgatgtctgcaacctcaagttctgacgttgaaaagctgaagaagcttattttacacaatccctacatcctgactttgcctgaggtgggagaaacaaaggatgacattatcccaaaaaatgtacagcaattttatatttcttgtgctgctcgtgataagcttgtccatgtccttgccctcttgaagcttgagttggtccagaaaaaagtcttgatatttacaaattcaattgacacgagttttagactcaaactattctttgagcagtttgggatcaagtctgcagttttaaatgccgagctgcctcagagttctcgtctacacatccttgaggaatttaatgctgggctatttgattacttgattgcgactgatgaaagtcaatcagaaggaaaggaaaaagttgatgatcaaaatggcagtgagcgaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="+" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="43183" stop="45969"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43483" g_stop="43541" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="59" r_length="59" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="43542" i_stop="43733" i_length="192">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.932" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="43734" g_stop="43848" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="60" r_stop="174" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="43849" i_stop="44392" i_length="544">
            <donor d_prob="0.833" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="44393" g_stop="44524" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="175" r_stop="306" r_length="132" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="44525" i_stop="45379" i_length="855">
            <donor d_prob="0.896" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="45380" g_stop="45445" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="307" r_stop="372" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="45446" i_stop="45567" i_length="122">
            <donor d_prob="0.896" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="45568" g_stop="45672" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="373" r_stop="477" r_length="105" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="+" ref_id="SGN-E372673" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>477</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E372673" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="43483" e_stop="43541"/>
          <exon e_start="43734" e_stop="43848"/>
          <exon e_start="44393" e_stop="44524"/>
          <exon e_start="45380" e_stop="45445"/>
          <exon e_start="45568" e_stop="45672"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTCTTACATCTCATGTACCAAGACGTTGCCAGTGCCTTCTGATGTCTGCAACCTCAAGGTATGCTCGCCTTACTATATTCACATATATATGTCAAGCAAATTCTTGCTGATTCTTCCACTGTCGCCTATGCTGGTTTTCTCCAGCACAAAGTTCTTGATTGTTACCATCTTACTTCCCATCTTCCCCCCCCCCCAACCCCCCACATCTCAAGGTTTGGATATGAACTTTCTTGGTCGTGTTAATATGCAGTTCTGACGTTGAAAAGCTGAAGAAGCTTATTTTACACAATCCCTACATCCTGACTTTGCCTGAGGTGGGAGAAACAAAGGATGACATTATCCCAAAAAATGTACAGCAATTTTATGTAAGTATACACCTTCAATAGAATAACTGCTTTAGTAGTCTGTCCTCTCTTCAACACTTATTCAGTGAGGGAGTTTTGGTGCCGTCTTGGTACTTTATATAAATATGTTTAATTTGATAGAGTGATCCTCATACTTTTGGTTTCTGTAATACCTGACTAAGAAGCTGTATCTTTTGTTCTAAGGTGTGAATTTAGGAGTCATCTAAAATGGTAAATTATATGTTCAATCGTCACACGCTTTTCAACCTCTTGTGATGGATAAGTGCCACATTATGACACTACCTTCTAGTAGGCAGAGGCATTTCCCAGGGCAGGACACTTTTGTTTTAGACGTCTTATTACAACAACAAATATACACCTCAACAACTGTGTATTGTTTGTGTTCTATGCTATTGTTTTCTCTTATAGTTTCGTGTCTCTAACTACCACTTCTACTGTTTGTTCAGATTTCTTATAGTTTCTTGTCTCTAACGACCACTTCTATTGTTTGTTCAGATTTCTTATAGTTTTGTGTCTCTAACAACAACTTCTATTGTTTGTTCAGATTTCTTGTGCTGCTCGTGATAAGCTTGTCCATGTCCTTGCCCTCTTGAAGCTTGAGTTGGTCCAGAAAAAAGTCTTGATATTTACAAATTCAATTGACACGAGTTTTAGACTCAAACTATTCTTTGAGCAGGTACATCCATGTACATGATGTCACTAATATCATAGGACATGTGATCAATTTATAAATGTTGTTCTATGTAAATGTCATACTTATCTTATGAATACCTCTATTAGAAGCACCAAAACATCTTTGCCACTTGAAACTTCTTTGTTCTTCTCTTATTGTTATTATAATTATTATATTATTACTTTTTTGTTTTATGAAAGCACATCTTTAGGAATTGTTGAAGTTAGTTCTGTTATACCTCCCGGTCTATGTAGATGACTAGATGATGCAGCCCATAGAGGGAGTGCTTTTTGTTTGTTTGTGCTCAATCATAGTTGAAAGTTATAGGGAGTCGTGGATCCGCTGGATGTGCAAAAGTGTAGTTTTGGCTTGTACAAAATTCAATAGCAACATGTTTGGCCAATATTCTAAAATCAGCTTATTTTGAGAAGTGCTTTTCAAGAAACTACCTTTGGTGAAAAGTCGTTTGTATTTGGTTAATCAATTTAAAAGCACTTCTGATTAGCAGCTAGTGTTTGACCAAGCTTTCAAAAAGTGCTTCTAAGTGTATTTTCTCATTCAAAAAAGTACTTTAGGTAAAAAAAATAATTTTTCTCAGCATTAGTAAAGCACTTATTTTCTCCCTAGAAGCTTGGCTAAACACCTCCATTTTTAAAGATAAGATCTTTCAGTGTTCCCAAAATCTTGGCCAAACTGGCTGCAGGTCACTATATTATCTATTTTCTATAAGGCTACATTTATGACCTGTAATCTTCTGGGTGCTTATAGGTTATTGGTCTATGTTTCCGATGCTATACTTACTGCCTGCCTGAGGTGTTCCTGATAGTATTTTTGATATCCTGGTTAATCATTTTGCAGTTTGGGATCAAGTCTGCAGTTTTAAATGCCGAGCTGCCTCAGAGTTCTCGTCTACACATCCTTGAGGTCTGTCATATGAGTGTAGAATGCCAAGAAATGCACACCTGTTGTATGGCTTTTGTTATAGTTCAACTCTTCTTGTGAAGTCTACTATTGCACTAGTCTCATAATTTTCTTCTTCTGAGCAGGAATTTAATGCTGGGCTATTTGATTACTTGATTGCGACTGATGAAAGTCAATCAGAAGGAAAGGAAAAAGTTGATGATCAAAATGGCAGTGAGCGAAAAAAATCA</genome_strand>
        <mrna_strand>GCTCTTACATCTCATGTACCAAGACGTTGCCAGTGCCTTCTGATGTCTGCAACCTCAAG................................................................................................................................................................................................TTCTGACGTTGAAAAGCTGAAGAAGCTTATTTTACACAATCCCTACATCCTGACTTTGCCTGAGGTGGGAGAAACAAAGGATGACATTATCCCAAAAAATGTACAGCAATTTTAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCTTGTGCTGCTCGTGATAAGCTTGTCCATGTCCTTGCCCTCTTGAAGCTTGAGTTGGTCCAGAAAAAAGTCTTGATATTTACAAATTCAATTGACACGAGTTTTAGACTCAAACTATTCTTTGAGCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGGATCAAGTCTGCAGTTTTAAATGCCGAGCTGCCTCAGAGTTCTCGTCTACACATCCTTGAG..........................................................................................................................GAATTTAATGCTGGGCTATTTGATTACTTGATTGCGACTGATGAAAGTCAATCAGAAGGAAAGGAAAAAGTTGATGATCAAAATGGCAGTGAGCGAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E705239" ref_strand="+" ref_description="SGN-E705239 [FA26CC02]">
      <seq>cttgtccatgtccttgccctcttgaagcttgagttggtccagaaaaaagtcttgatatttacaaattcaattgacacgagttttagactcaaactattctttgagcagtttgggatcaagtctgcagttttaaatgccgagctgcctcagagttctcgtctacacatccttgaggaatttaatgctgggctatttgattacttgattgcgactgatgaaagtcaatcagaaggaaaggaaaaagttgatgatcaaaatggcagtgagcgaaaaaaatcaaaaaaacatcgaaagcataaattggatgcagagtttggtgtagtcagagggatagacttcaaaaatgtgcatacggtgataaattatgagatgcctcaaacagctgcaggctatgtacatcgaattggacgtactggaagagcatataatactggagcatctgtctctcttgtctctgatgaagagacagaaatatttgaagagattaaatctttactgggggaaaatgaagacaaggtgtcacagtttattgctccattcccattgctgagtaaaaatgcagtagagtctttgcgttaccgagctgaggatgttggaaggagtattacaaaaattgcagtaagagaatcacgggctcaggatctgaggaatgaaattcttaattctcaaaaattgaaggctcattttcaagataatccaaaagacttagatcttctgaagcatgataagatgttaagcaagaaagcacctgccgctcacctacgtgatgtacctgactacctattagatcccacgacacaagaagctagcaagattgtgaagctggccagagctgcaatgggcaatacta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="+" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="44117" stop="48500"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44417" g_stop="44524" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="108" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="44525" i_stop="45379" i_length="855">
            <donor d_prob="0.896" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="45380" g_stop="45445" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="109" r_stop="174" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="45446" i_stop="45567" i_length="122">
            <donor d_prob="0.896" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="45568" g_stop="45747" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="175" r_stop="354" r_length="180" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="45748" i_stop="45927" i_length="180">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="45928" g_stop="46023" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="355" r_stop="450" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="46024" i_stop="46399" i_length="376">
            <donor d_prob="0.865" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="46400" g_stop="46537" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="451" r_stop="588" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="46538" i_stop="47182" i_length="645">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="47183" g_stop="47265" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="589" r_stop="671" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="47266" i_stop="47945" i_length="680">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="47946" g_stop="47983" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="672" r_stop="709" r_length="38" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="47984" i_stop="48059" i_length="76">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="48060" g_stop="48200" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="710" r_stop="850" r_length="141" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="+" ref_id="SGN-E705239" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>850</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E705239" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44417" e_stop="44524"/>
          <exon e_start="45380" e_stop="45445"/>
          <exon e_start="45568" e_stop="45747"/>
          <exon e_start="45928" e_stop="46023"/>
          <exon e_start="46400" e_stop="46537"/>
          <exon e_start="47183" e_stop="47265"/>
          <exon e_start="47946" e_stop="47983"/>
          <exon e_start="48060" e_stop="48200"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGTCCATGTCCTTGCCCTCTTGAAGCTTGAGTTGGTCCAGAAAAAAGTCTTGATATTTACAAATTCAATTGACACGAGTTTTAGACTCAAACTATTCTTTGAGCAGGTACATCCATGTACATGATGTCACTAATATCATAGGACATGTGATCAATTTATAAATGTTGTTCTATGTAAATGTCATACTTATCTTATGAATACCTCTATTAGAAGCACCAAAACATCTTTGCCACTTGAAACTTCTTTGTTCTTCTCTTATTGTTATTATAATTATTATATTATTACTTTTTTGTTTTATGAAAGCACATCTTTAGGAATTGTTGAAGTTAGTTCTGTTATACCTCCCGGTCTATGTAGATGACTAGATGATGCAGCCCATAGAGGGAGTGCTTTTTGTTTGTTTGTGCTCAATCATAGTTGAAAGTTATAGGGAGTCGTGGATCCGCTGGATGTGCAAAAGTGTAGTTTTGGCTTGTACAAAATTCAATAGCAACATGTTTGGCCAATATTCTAAAATCAGCTTATTTTGAGAAGTGCTTTTCAAGAAACTACCTTTGGTGAAAAGTCGTTTGTATTTGGTTAATCAATTTAAAAGCACTTCTGATTAGCAGCTAGTGTTTGACCAAGCTTTCAAAAAGTGCTTCTAAGTGTATTTTCTCATTCAAAAAAGTACTTTAGGTAAAAAAAATAATTTTTCTCAGCATTAGTAAAGCACTTATTTTCTCCCTAGAAGCTTGGCTAAACACCTCCATTTTTAAAGATAAGATCTTTCAGTGTTCCCAAAATCTTGGCCAAACTGGCTGCAGGTCACTATATTATCTATTTTCTATAAGGCTACATTTATGACCTGTAATCTTCTGGGTGCTTATAGGTTATTGGTCTATGTTTCCGATGCTATACTTACTGCCTGCCTGAGGTGTTCCTGATAGTATTTTTGATATCCTGGTTAATCATTTTGCAGTTTGGGATCAAGTCTGCAGTTTTAAATGCCGAGCTGCCTCAGAGTTCTCGTCTACACATCCTTGAGGTCTGTCATATGAGTGTAGAATGCCAAGAAATGCACACCTGTTGTATGGCTTTTGTTATAGTTCAACTCTTCTTGTGAAGTCTACTATTGCACTAGTCTCATAATTTTCTTCTTCTGAGCAGGAATTTAATGCTGGGCTATTTGATTACTTGATTGCGACTGATGAAAGTCAATCAGAAGGAAAGGAAAAAGTTGATGATCAAAATGGCAGTGAGCGAAAAAAATCAAAAAAACATCGAAAGCATAAATTGGATGCAGAGTTTGGTGTAGTCAGAGGGATAGACTTCAAAAATGTGCATACGGTAAGTTTGTTCTGTTCTTTATGGAATGTTGTCCTCCATTTGGCGGCTTATGTTTTTTTCTTTTATCATTTCCTGTTGAGCCATTTAGTGATAGAGGATACACAACCCAGTCTGAATAGAAGTTCTGGATTTTGCATAGACCTAATACTCCATATCCTCTTTATGTCTTATTTTGCACAGGTGATAAATTATGAGATGCCTCAAACAGCTGCAGGCTATGTACATCGAATTGGACGTACTGGAAGAGCATATAATACTGGAGCATCTGTCTCTCTTGTGAGTAGTTTGAAGACATGTCTGAGGTCATTGATATACAATTGTGATTGCTAGCATATGATTTAGTTGATTACTTATTGGATATTAGGTTATGTGTTTTAATGTTGTTTGGTTTTTAAATGTTGAACTGCTGATTCATAGAATTTCGCTCTTGGCATTAACAAATTACCCAATGTTCTTATTTCATCTACTCTCTGAATTTGTTTTTCATTTGAGAGTGGCATGACTTCGTAGATCATAGGCTGGGGAATCGGTTTTATACATCTTATCTAAAAATTACTTAAGTCTTCCTTCCCTATGAACTCTCTTCCGACGACTGTAGGAGAAAACTATGTTTTCTTTTTGCCTTTTTGACCATGTTTTTGTTTTGTTACAGGTCTCTGATGAAGAGACAGAAATATTTGAAGAGATTAAATCTTTACTGGGGGAAAATGAAGACAAGGTGTCACAGTTTATTGCTCCATTCCCATTGCTGAGTAAAAATGCAGTAGAGTCTTTGCGTTACCGAGCTGAGGTAAAACTTTCATCAATTGTATTTCTACAATAGTCATTGTGTGATAAGTTACTATTGGGAGCCTAGCAGAGTTAGGAGTGTCACCTAGTCCTAGTATAAGTTACTATTGGGAGCCTAGCCGAGTTAGGAGTGTCACCTAGTCCTAGTAGCAGTGAACTTTGTGAAGTTAAGGTTATCAAGTGAGTGTCTTACAGAGGTATATAATGCTTCCTGCTTTAACTATCTCGAGTATGTTTTTTGTGAAAAGAAACAGACAAATATTTAGATGTTACATTTAGTTGTATAGAGCGTTTAAAAAGTGAGCCTCATTGGTAATCATGAATAAATTTGAGTTGTATGTCCAAATTCACCAATCTGTAAATCAACAGATTATTAATTAGTCCATATTTTGTCAACCTCTTGATGCACAAGCATGCTTTAACTATACAAGACGATCCATGCTGTAAAATTAACTCGTGTGACTACTTTTAAGAATTTGGTTTACTGCAAGCCCATCTCATTCGCCGCCATCACCCGGACAAAAGGAAGTAAAGATATACATATATTTTTATGGAAAAGCAGTTAACTTGAACTGTATGCTGGTGCACTCCTGCCGATTTCTTTGTTTTGGGAGTCTAGATTGCTTGACTGCCATCTTTTCTGTAGGATGTTGGAAGGAGTATTACAAAAATTGCAGTAAGAGAATCACGGGCTCAGGATCTGAGGAATGAAATTCTTAATTCTCAAAAGTAAGCTACTCTGTTTATTTTTTCTTTTCTTCTTTGAATAGCTCATTTTCCTTTTTTCACTGTTCATGTATTATTGCGCTAATTTCTGACAATTACTGAGAATATAGCTCAGTTTCTGTCCAAAAATAAGTGTCATGTTTCCGTCCAATCTAGGTGTAATTGTCCTCCTCATCCCATTCTTTTTTTGATAAGGAGTTAAGGACCTTCCCATAGTTCATCACTTTAAGTAGTTTAGAAATGTGATGACAGCCTCATTGTTCTGATTCAGACATCACTCAAATAGAAGTTCTTTCAGTTAAAAGGGGATTTTTGATGGTACAATTGTTACTCACTCTCGACTGTATGATGCATATCTGCTTTAAATTAATTCAGATTTCTTTTCATGGAAATTCAAGATTTGAATGACTCAATACTTTATCAAATGATTTGAATGTCTCATAATATGTTAAAGCTGGAGTAAAACTTATACCTTTGGGAAGAAGTTACAATATTTGTCATATATTTATTTTGTAGATTAATAGTTTGCTTTCATATAGTTATTTGTTTGTTAATATTCTTCACCTATCTGTTAGGAGGCACTTTCCAAGCCTGGTTACTGATTTTATATTTTTCAATGATTGTATTTTGCTGTGCTTGACTTGTAATCTGTATTAACTACTTCTTCCGCTTGTATTATCCAGATTGAAGGCTCATTTTCAAGATAATCCAAAAGACTTAGGTAATTAGGCTGTAGTTTGTGGGATGTACTTTGAGTGAACATAGTAGGTCTCATTATATTCAAATGTTCTGGGCAGATCTTCTGAAGCATGATAAGATGTTAAGCAAGAAAGCACCTGCCGCTCACCTACGTGATGTACCTGACTACCTATTAGATCCAACGACACAAGAAGCTAGCAAGATTGTGAAGCTGGCCAGAGCTGCAATGGGCAATACTA</genome_strand>
        <mrna_strand>CTTGTCCATGTCCTTGCCCTCTTGAAGCTTGAGTTGGTCCAGAAAAAAGTCTTGATATTTACAAATTCAATTGACACGAGTTTTAGACTCAAACTATTCTTTGAGCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGGATCAAGTCTGCAGTTTTAAATGCCGAGCTGCCTCAGAGTTCTCGTCTACACATCCTTGAG..........................................................................................................................GAATTTAATGCTGGGCTATTTGATTACTTGATTGCGACTGATGAAAGTCAATCAGAAGGAAAGGAAAAAGTTGATGATCAAAATGGCAGTGAGCGAAAAAAATCAAAAAAACATCGAAAGCATAAATTGGATGCAGAGTTTGGTGTAGTCAGAGGGATAGACTTCAAAAATGTGCATACG....................................................................................................................................................................................GTGATAAATTATGAGATGCCTCAAACAGCTGCAGGCTATGTACATCGAATTGGACGTACTGGAAGAGCATATAATACTGGAGCATCTGTCTCTCTT........................................................................................................................................................................................................................................................................................................................................................................................GTCTCTGATGAAGAGACAGAAATATTTGAAGAGATTAAATCTTTACTGGGGGAAAATGAAGACAAGGTGTCACAGTTTATTGCTCCATTCCCATTGCTGAGTAAAAATGCAGTAGAGTCTTTGCGTTACCGAGCTGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTTGGAAGGAGTATTACAAAAATTGCAGTAAGAGAATCACGGGCTCAGGATCTGAGGAATGAAATTCTTAATTCTCAAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGAAGGCTCATTTTCAAGATAATCCAAAAGACTTAG............................................................................ATCTTCTGAAGCATGATAAGATGTTAAGCAAGAAAGCACCTGCCGCTCACCTACGTGATGTACCTGACTACCTATTAGATCCCACGACACAAGAAGCTAGCAAGATTGTGAAGCTGGCCAGAGCTGCAATGGGCAATACTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E405144" ref_strand="+" ref_description="SGN-E405144 [PPC-16-P19]">
      <seq>agttgcgactgatgaaagcaatcagaaagaaaggagcaagttgatgatcaaaatggcagtgagcgaaaaaaatcaaaaaaacatcgaaagcataaattggatgcagagtttggtgtggtcagagggatagacttcaaaaatgtgcatactgtgataaattatgagatgcctcaaacagctgcaggctatgtacatcgaattggacgtactggaagagcatataatactggagcatctgtctctcttgtttctgatgaagagacagaaatatttgaagagattaaatctttactgggggaaaatgaagacaaggtgtcacagtttattgccccattcccattgctgggtaaaaatgcagtggagtctttgcgttaccgagctgaagatgttgcaaagagtgttacaaaaattgcggta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="+" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="45297" stop="46838"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45597" g_stop="45747" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="150" r_length="150" r_score="0.947"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="45748" i_stop="45927" i_length="180">
            <donor d_prob="0.991" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="45928" g_stop="46023" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="151" r_stop="246" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="46024" i_stop="46399" i_length="376">
            <donor d_prob="0.865" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="46400" g_stop="46537" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="247" r_stop="384" r_length="138" r_score="0.964"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="+" ref_id="SGN-E405144" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>385</cumulative_length_of_scored_exons>
        <coverage percentage="0.923" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E405144" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45597" e_stop="45747"/>
          <exon e_start="45928" e_stop="46023"/>
          <exon e_start="46400" e_stop="46537"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATTGCGACTGATGAAAGTCAATCAGAAGGAAAGGAAAAAGTTGATGATCAAAATGGCAGTGAGCGAAAAAAATCAAAAAAACATCGAAAGCATAAATTGGATGCAGAGTTTGGTGTAGTCAGAGGGATAGACTTCAAAAATGTGCATACGGTAAGTTTGTTCTGTTCTTTATGGAATGTTGTCCTCCATTTGGCGGCTTATGTTTTTTTCTTTTATCATTTCCTGTTGAGCCATTTAGTGATAGAGGATACACAACCCAGTCTGAATAGAAGTTCTGGATTTTGCATAGACCTAATACTCCATATCCTCTTTATGTCTTATTTTGCACAGGTGATAAATTATGAGATGCCTCAAACAGCTGCAGGCTATGTACATCGAATTGGACGTACTGGAAGAGCATATAATACTGGAGCATCTGTCTCTCTTGTGAGTAGTTTGAAGACATGTCTGAGGTCATTGATATACAATTGTGATTGCTAGCATATGATTTAGTTGATTACTTATTGGATATTAGGTTATGTGTTTTAATGTTGTTTGGTTTTTAAATGTTGAACTGCTGATTCATAGAATTTCGCTCTTGGCATTAACAAATTACCCAATGTTCTTATTTCATCTACTCTCTGAATTTGTTTTTCATTTGAGAGTGGCATGACTTCGTAGATCATAGGCTGGGGAATCGGTTTTATACATCTTATCTAAAAATTACTTAAGTCTTCCTTCCCTATGAACTCTCTTCCGACGACTGTAGGAGAAAACTATGTTTTCTTTTTGCCTTTTTGACCATGTTTTTGTTTTGTTACAGGTCTCTGATGAAGAGACAGAAATATTTGAAGAGATTAAATCTTTACTGGGGGAAAATGAAGACAAGGTGTCACAGTTTATTGCTCCATTCCCATTGCTGAGTAAAAATGCAGTAGAGTCTTTGCGTTACCGAGCTGAG</genome_strand>
        <mrna_strand>AGTTGCGACTGATGAAAG-CAATCAGAAAGAAAGGAGCAAGTTGATGATCAAAATGGCAGTGAGCGAAAAAAATCAAAAAAACATCGAAAGCATAAATTGGATGCAGAGTTTGGTGTGGTCAGAGGGATAGACTTCAAAAATGTGCATACT....................................................................................................................................................................................GTGATAAATTATGAGATGCCTCAAACAGCTGCAGGCTATGTACATCGAATTGGACGTACTGGAAGAGCATATAATACTGGAGCATCTGTCTCTCTT........................................................................................................................................................................................................................................................................................................................................................................................GTTTCTGATGAAGAGACAGAAATATTTGAAGAGATTAAATCTTTACTGGGGGAAAATGAAGACAAGGTGTCACAGTTTATTGCCCCATTCCCATTGCTGGGTAAAAATGCAGTGGAGTCTTTGCGTTACCGAGCTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E428941" ref_strand="-" ref_description="SGN-E428941 [STM-51-M13]">
      <seq>agaaatatttgaagagattaaatctttactgggggaaaatgaagacaaggtgtcacagtttattgccccattcccattgctgagtaaaaatgcagtggagtctttgcgttaccgagctgaggatgttgcaaggagtgttacaaaaattgcggtaagagaatcacgggctcaggatctgaggaatgagattcttaattctcaaaaattgaaggctcattttcaagataatccaaaagacttagatcttttgaagcatgataagatgttaagcaagaaagcacctgccccacacctacgtgatgtacctgactacctattggatccaacaacacaagaagctagcaagattgtgaagctggccagagctgcaatgagcaatactaatccatctcgtggcaaaggatcaaagggaaggttcaaaagaagcagagaccctcttaaaacattttcagctgaggcacctaagcgagcagggaaaggtgggatgaagagaaaggtaaaagatactgataatggccataaacagtaaaagaaacaccctgcctagttgtttgatacaaggaattgtagtttatacgaaatttgaattatttatcaatcaattttttttgaatgctttcactaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="+" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="46117" stop="49196"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46417" g_stop="46537" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="121" r_length="121" r_score="0.983"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46538" i_stop="47182" i_length="645">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="47183" g_stop="47265" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="122" r_stop="204" r_length="83" r_score="0.952"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="47266" i_stop="47945" i_length="680">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.996" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="47946" g_stop="47983" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="205" r_stop="242" r_length="38" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="47984" i_stop="48059" i_length="76">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.987" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="48060" g_stop="48274" g_length="215"/>
          <reference_exon_boundary r_type="cDNA" r_start="243" r_stop="457" r_length="215" r_score="0.972"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="48275" i_stop="48726" i_length="452">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="48727" g_stop="48908" g_length="182"/>
          <reference_exon_boundary r_type="cDNA" r_start="458" r_stop="637" r_length="180" r_score="0.901"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="+" ref_id="SGN-E428941" ref_strand="-">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>639</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E428941" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="46417" e_stop="46537"/>
          <exon e_start="47183" e_stop="47265"/>
          <exon e_start="47946" e_stop="47983"/>
          <exon e_start="48060" e_stop="48274"/>
          <exon e_start="48727" e_stop="48908"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAATATTTGAAGAGATTAAATCTTTACTGGGGGAAAATGAAGACAAGGTGTCACAGTTTATTGCTCCATTCCCATTGCTGAGTAAAAATGCAGTAGAGTCTTTGCGTTACCGAGCTGAGGTAAAACTTTCATCAATTGTATTTCTACAATAGTCATTGTGTGATAAGTTACTATTGGGAGCCTAGCAGAGTTAGGAGTGTCACCTAGTCCTAGTATAAGTTACTATTGGGAGCCTAGCCGAGTTAGGAGTGTCACCTAGTCCTAGTAGCAGTGAACTTTGTGAAGTTAAGGTTATCAAGTGAGTGTCTTACAGAGGTATATAATGCTTCCTGCTTTAACTATCTCGAGTATGTTTTTTGTGAAAAGAAACAGACAAATATTTAGATGTTACATTTAGTTGTATAGAGCGTTTAAAAAGTGAGCCTCATTGGTAATCATGAATAAATTTGAGTTGTATGTCCAAATTCACCAATCTGTAAATCAACAGATTATTAATTAGTCCATATTTTGTCAACCTCTTGATGCACAAGCATGCTTTAACTATACAAGACGATCCATGCTGTAAAATTAACTCGTGTGACTACTTTTAAGAATTTGGTTTACTGCAAGCCCATCTCATTCGCCGCCATCACCCGGACAAAAGGAAGTAAAGATATACATATATTTTTATGGAAAAGCAGTTAACTTGAACTGTATGCTGGTGCACTCCTGCCGATTTCTTTGTTTTGGGAGTCTAGATTGCTTGACTGCCATCTTTTCTGTAGGATGTTGGAAGGAGTATTACAAAAATTGCAGTAAGAGAATCACGGGCTCAGGATCTGAGGAATGAAATTCTTAATTCTCAAAAGTAAGCTACTCTGTTTATTTTTTCTTTTCTTCTTTGAATAGCTCATTTTCCTTTTTTCACTGTTCATGTATTATTGCGCTAATTTCTGACAATTACTGAGAATATAGCTCAGTTTCTGTCCAAAAATAAGTGTCATGTTTCCGTCCAATCTAGGTGTAATTGTCCTCCTCATCCCATTCTTTTTTTGATAAGGAGTTAAGGACCTTCCCATAGTTCATCACTTTAAGTAGTTTAGAAATGTGATGACAGCCTCATTGTTCTGATTCAGACATCACTCAAATAGAAGTTCTTTCAGTTAAAAGGGGATTTTTGATGGTACAATTGTTACTCACTCTCGACTGTATGATGCATATCTGCTTTAAATTAATTCAGATTTCTTTTCATGGAAATTCAAGATTTGAATGACTCAATACTTTATCAAATGATTTGAATGTCTCATAATATGTTAAAGCTGGAGTAAAACTTATACCTTTGGGAAGAAGTTACAATATTTGTCATATATTTATTTTGTAGATTAATAGTTTGCTTTCATATAGTTATTTGTTTGTTAATATTCTTCACCTATCTGTTAGGAGGCACTTTCCAAGCCTGGTTACTGATTTTATATTTTTCAATGATTGTATTTTGCTGTGCTTGACTTGTAATCTGTATTAACTACTTCTTCCGCTTGTATTATCCAGATTGAAGGCTCATTTTCAAGATAATCCAAAAGACTTAGGTAATTAGGCTGTAGTTTGTGGGATGTACTTTGAGTGAACATAGTAGGTCTCATTATATTCAAATGTTCTGGGCAGATCTTCTGAAGCATGATAAGATGTTAAGCAAGAAAGCACCTGCCGCTCACCTACGTGATGTACCTGACTACCTATTAGATCCAACGACACAAGAAGCTAGCAAGATTGTGAAGCTGGCCAGAGCTGCAATGGGCAATACTAATCCATCTCGTGGCAAAGGATCAAAGGGAAGGTTCAAAAGAAGCAGAGACCCTCTTAAAACATTTTCAGCTGAGGTATACCTCCCCAACCTCTACTTGCACTAAGCTGTATGTGTTGGTGATTTTACATTCATGTTTTGTCTGTGTACCACTAGAAATTGAACTAGCAAGTTCTACTTATTCGAGTCTTGTCAACATGATGATATGATCAAATGTCTTCCTTCTTGGTTGAGGAAGGGTAAACTTGTGGATTGTGGGGTTAGGTATTACTGTATTTCGTCTCTCTTTTTAATACTTGTCAGAGGTTATCGATGAAGTTCTGCTTATTCATATAGATATGATCTGAGATTACTTGTGTAGTCAATACGTTCCACACGATCAAACAAGGAAATACATCTTGAACAGGATGTAGGTTATCGAAGGGAATGATCATATATATGAAATACAATCCTAGATGATTGTGTTCTTGGCTTTATTATGGGCAACGTTGGTGGCTTGGTGTTTGATCTCTTCTTCTTTGATTGCAGGCACCTAAGCGAGCAGGGAAAGGCGGGATGAAAAGAAAGGTAAAAGATACCGATAATGGCCATTAACATTAAAAGGAACACCCTGCCTAGTTGTTTGATACAAGGAATTGTAGTTTATACGAAATTTGAATTATATTTATCAATCAATTTTTTTTGAATGCTTTCACTAACCCTAGTCCCAG</genome_strand>
        <mrna_strand>AGAAATATTTGAAGAGATTAAATCTTTACTGGGGGAAAATGAAGACAAGGTGTCACAGTTTATTGCCCCATTCCCATTGCTGAGTAAAAATGCAGTGGAGTCTTTGCGTTACCGAGCTGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTTGCAAGGAGTGTTACAAAAATTGCGGTAAGAGAATCACGGGCTCAGGATCTGAGGAATGAGATTCTTAATTCTCAAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGAAGGCTCATTTTCAAGATAATCCAAAAGACTTAG............................................................................ATCTTTTGAAGCATGATAAGATGTTAAGCAAGAAAGCACCTGCCCCACACCTACGTGATGTACCTGACTACCTATTGGATCCAACAACACAAGAAGCTAGCAAGATTGTGAAGCTGGCCAGAGCTGCAATGAGCAATACTAATCCATCTCGTGGCAAAGGATCAAAGGGAAGGTTCAAAAGAAGCAGAGACCCTCTTAAAACATTTTCAGCTGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAGCGAGCAGGGAAAGGTGGGATGAAGAGAAAGGTAAAAGATACTGATAATGGCCATAAACAGTAAAAGAAACACCCTGCCTAGTTGTTTGATACAAGGAATTGTAGTTTATACGAAATTTGAA-T-TATTTATCAATCAATTTTTTTTGAATGCTTTCACTAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E228766" ref_strand="+" ref_description="SGN-E228766 [cLEL-29-G13](-)">
      <seq>atgaaattcttaattctcaaaaattaaaggctncattttcaagataatccaaaagacttagatcttctgaagcatgataagatgttaagcaagaaagcacctgccgctcacctacgtgatgtacctgactacctattagatccaacgacacaagaagctagcaagattgtgaagctggccagagctgcaatgggcaatactaatccatctcgtggcaaaggatcaaagggaaggttcaaaagaagcagagaccctcttaaaacattttcagctgaggcacctaagcgagcagggaaaggcaggatgaaaagaaaggtaaaagataccgataatggccattaacattaaaaggaacaccctgcctagttgtttgatacaaggaattgtagtttatacgaaatttgaattatatttatcaatcaattttttttgaatgctttcaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="+" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="46944" stop="49196"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47244" g_stop="47265" g_length="22"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="22" r_length="22" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="47266" i_stop="47945" i_length="680">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="0.996" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="47946" g_stop="47983" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="23" r_stop="61" r_length="39" r_score="0.921"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="47984" i_stop="48059" i_length="76">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="48060" g_stop="48274" g_length="215"/>
          <reference_exon_boundary r_type="cDNA" r_start="62" r_stop="276" r_length="215" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="48275" i_stop="48726" i_length="452">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="48727" g_stop="48892" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="277" r_stop="442" r_length="166" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="443" polyA_stop="458"/>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="+" ref_id="SGN-E228766" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>441</cumulative_length_of_scored_exons>
        <coverage percentage="0.963" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E228766" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47244" e_stop="47265"/>
          <exon e_start="47946" e_stop="47983"/>
          <exon e_start="48060" e_stop="48274"/>
          <exon e_start="48727" e_stop="48892"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGAAATTCTTAATTCTCAAAAGTAAGCTACTCTGTTTATTTTTTCTTTTCTTCTTTGAATAGCTCATTTTCCTTTTTTCACTGTTCATGTATTATTGCGCTAATTTCTGACAATTACTGAGAATATAGCTCAGTTTCTGTCCAAAAATAAGTGTCATGTTTCCGTCCAATCTAGGTGTAATTGTCCTCCTCATCCCATTCTTTTTTTGATAAGGAGTTAAGGACCTTCCCATAGTTCATCACTTTAAGTAGTTTAGAAATGTGATGACAGCCTCATTGTTCTGATTCAGACATCACTCAAATAGAAGTTCTTTCAGTTAAAAGGGGATTTTTGATGGTACAATTGTTACTCACTCTCGACTGTATGATGCATATCTGCTTTAAATTAATTCAGATTTCTTTTCATGGAAATTCAAGATTTGAATGACTCAATACTTTATCAAATGATTTGAATGTCTCATAATATGTTAAAGCTGGAGTAAAACTTATACCTTTGGGAAGAAGTTACAATATTTGTCATATATTTATTTTGTAGATTAATAGTTTGCTTTCATATAGTTATTTGTTTGTTAATATTCTTCACCTATCTGTTAGGAGGCACTTTCCAAGCCTGGTTACTGATTTTATATTTTTCAATGATTGTATTTTGCTGTGCTTGACTTGTAATCTGTATTAACTACTTCTTCCGCTTGTATTATCCAGATTGAAGGCT-CATTTTCAAGATAATCCAAAAGACTTAGGTAATTAGGCTGTAGTTTGTGGGATGTACTTTGAGTGAACATAGTAGGTCTCATTATATTCAAATGTTCTGGGCAGATCTTCTGAAGCATGATAAGATGTTAAGCAAGAAAGCACCTGCCGCTCACCTACGTGATGTACCTGACTACCTATTAGATCCAACGACACAAGAAGCTAGCAAGATTGTGAAGCTGGCCAGAGCTGCAATGGGCAATACTAATCCATCTCGTGGCAAAGGATCAAAGGGAAGGTTCAAAAGAAGCAGAGACCCTCTTAAAACATTTTCAGCTGAGGTATACCTCCCCAACCTCTACTTGCACTAAGCTGTATGTGTTGGTGATTTTACATTCATGTTTTGTCTGTGTACCACTAGAAATTGAACTAGCAAGTTCTACTTATTCGAGTCTTGTCAACATGATGATATGATCAAATGTCTTCCTTCTTGGTTGAGGAAGGGTAAACTTGTGGATTGTGGGGTTAGGTATTACTGTATTTCGTCTCTCTTTTTAATACTTGTCAGAGGTTATCGATGAAGTTCTGCTTATTCATATAGATATGATCTGAGATTACTTGTGTAGTCAATACGTTCCACACGATCAAACAAGGAAATACATCTTGAACAGGATGTAGGTTATCGAAGGGAATGATCATATATATGAAATACAATCCTAGATGATTGTGTTCTTGGCTTTATTATGGGCAACGTTGGTGGCTTGGTGTTTGATCTCTTCTTCTTTGATTGCAGGCACCTAAGCGAGCAGGGAAAGGCGGGATGAAAAGAAAGGTAAAAGATACCGATAATGGCCATTAACATTAAAAGGAACACCCTGCCTAGTTGTTTGATACAAGGAATTGTAGTTTATACGAAATTTGAATTATATTTATCAATCAATTTTTTTTGAATGCTTTCA</genome_strand>
        <mrna_strand>ATGAAATTCTTAATTCTCAAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAAAGGCTNCATTTTCAAGATAATCCAAAAGACTTAG............................................................................ATCTTCTGAAGCATGATAAGATGTTAAGCAAGAAAGCACCTGCCGCTCACCTACGTGATGTACCTGACTACCTATTAGATCCAACGACACAAGAAGCTAGCAAGATTGTGAAGCTGGCCAGAGCTGCAATGGGCAATACTAATCCATCTCGTGGCAAAGGATCAAAGGGAAGGTTCAAAAGAAGCAGAGACCCTCTTAAAACATTTTCAGCTGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAGCGAGCAGGGAAAGGCAGGATGAAAAGAAAGGTAAAAGATACCGATAATGGCCATTAACATTAAAAGGAACACCCTGCCTAGTTGTTTGATACAAGGAATTGTAGTTTATACGAAATTTGAATTATATTTATCAATCAATTTTTTTTGAATGCTTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E609740" ref_strand="+" ref_description="SGN-E609740 [25755]">
      <seq>tttatgatttttaatgattgtattttggtgtgcttgactggtaatctgtattaagtactttttccgcttgtccttatccagattgaaggctcattttcaagataatccaaaagacttaggtaattaagctgtagtttgtgggatgtactttgagtgaacattctaggactcattatattcaaatgttctgggcagatcttttgaagcatgataagatgttaagcaagaaagcacctgccccacacctacgtgatgtacctgactacctattggatccaacaacacaagaagctagcaagattgtgaagctggccagagctgcaatgggcaatactaatccatctcgtggcaaaggatcaaagggaaggttcaaaagaagcagagaccctcttaaaacatttttcagctgaggcacctaagcgagcagggaaaggtgggatgaagagaaaggtaaaagatactgataatggccataaacagtaaaagaaacaccaccctgcctagttgtttgatacaaggaattgtagtttatacgaaatttgaattatttatcaatccaattttttctttggaaaaaaaacagacaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="+" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="47638" stop="49184"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47866" g_stop="48274" g_length="409"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="411" r_length="411" r_score="0.949"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="48275" i_stop="48726" i_length="452">
            <donor d_prob="0.995" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="48727" g_stop="48880" g_length="154"/>
          <reference_exon_boundary r_type="cDNA" r_start="412" r_stop="566" r_length="155" r_score="0.896"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="+" ref_id="SGN-E609740" ref_strand="+">
        <total_alignment_score>0.934</total_alignment_score>
        <cumulative_length_of_scored_exons>563</cumulative_length_of_scored_exons>
        <coverage percentage="0.956" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E609740" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47866" e_stop="48274"/>
          <exon e_start="48727" e_stop="48880"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTATATTTTTCAATGATTGTATTTTGCTGTGCTTGACTTGTAATCTGTATTAACTACTTCTTCCGCTTGT-ATTATCCAGATTGAAGGCTCATTTTCAAGATAATCCAAAAGACTTAGGTAATTAGGCTGTAGTTTGTGGGATGTACTTTGAGTGAACATAGTAGGTCTCATTATATTCAAATGTTCTGGGCAGATCTTCTGAAGCATGATAAGATGTTAAGCAAGAAAGCACCTGCCGCTCACCTACGTGATGTACCTGACTACCTATTAGATCCAACGACACAAGAAGCTAGCAAGATTGTGAAGCTGGCCAGAGCTGCAATGGGCAATACTAATCCATCTCGTGGCAAAGGATCAAAGGGAAGGTTCAAAAGAAGCAGAGACCCTCTTAAAACA-TTTTCAGCTGAGGTATACCTCCCCAACCTCTACTTGCACTAAGCTGTATGTGTTGGTGATTTTACATTCATGTTTTGTCTGTGTACCACTAGAAATTGAACTAGCAAGTTCTACTTATTCGAGTCTTGTCAACATGATGATATGATCAAATGTCTTCCTTCTTGGTTGAGGAAGGGTAAACTTGTGGATTGTGGGGTTAGGTATTACTGTATTTCGTCTCTCTTTTTAATACTTGTCAGAGGTTATCGATGAAGTTCTGCTTATTCATATAGATATGATCTGAGATTACTTGTGTAGTCAATACGTTCCACACGATCAAACAAGGAAATACATCTTGAACAGGATGTAGGTTATCGAAGGGAATGATCATATATATGAAATACAATCCTAGATGATTGTGTTCTTGGCTTTATTATGGGCAACGTTGGTGGCTTGGTGTTTGATCTCTTCTTCTTTGATTGCAGGCACCTAAGCGAGCAGGGAAAGGCGGGATGAAAAGAAAGGTAAAAGATACCGATAATGGCCATTAACATTAAAAG-GA-A-CACCCTGCCTAGTTGTTTGATACAAGGAATTGTAGTTTATACGAAATTTGAATTATATTTATCAATCAATTTTTTT</genome_strand>
        <mrna_strand>TTTATGATTTTTAATGATTGTATTTTGGTGTGCTTGACTGGTAATCTGTATTAAGTACTTTTTCCGCTTGTCCTTATCCAGATTGAAGGCTCATTTTCAAGATAATCCAAAAGACTTAGGTAATTAAGCTGTAGTTTGTGGGATGTACTTTGAGTGAACATTCTAGGACTCATTATATTCAAATGTTCTGGGCAGATCTTTTGAAGCATGATAAGATGTTAAGCAAGAAAGCACCTGCCCCACACCTACGTGATGTACCTGACTACCTATTGGATCCAACAACACAAGAAGCTAGCAAGATTGTGAAGCTGGCCAGAGCTGCAATGGGCAATACTAATCCATCTCGTGGCAAAGGATCAAAGGGAAGGTTCAAAAGAAGCAGAGACCCTCTTAAAACATTTTTCAGCTGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAGCGAGCAGGGAAAGGTGGGATGAAGAGAAAGGTAAAAGATACTGATAATGGCCATAAACAGTAAAAGAAACACCACCCTGCCTAGTTGTTTGATACAAGGAATTGTAGTTTATACGAAATTTGAA-T-TATTTATCAATCCAATTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E229054" ref_strand="+" ref_description="SGN-E229054 [cLEL-29-G13](-)">
      <seq>ctcaaaaattgaaggctcattttcaagataatccaaaagacttagatcttctgaagcatgataagatgttaagcaagaaagcacctgccgctcacctacgtgatgtacctgactacctattagatccaacgacacaagaagctagcaagattgtgaagctggccagagctgcaatgggcaatactaatccatctcgtggcaaaggatcaaagggaaggttcaaaagaagcagagaccctcttaaaacattttcagctgaggcacctaagcgagcagggaaaggcaggatgaaaagaaaggtaaaagataccgataatggccattaacattaaaaggaacaccctgcctagttgtttgatacaaggaattgtagtttatacgaaatttgaattatatttatcaatcaattttttttgaatgctttcaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="+" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="47644" stop="49196"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47946" g_stop="47983" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="8" r_stop="45" r_length="38" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="47984" i_stop="48059" i_length="76">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="48060" g_stop="48274" g_length="215"/>
          <reference_exon_boundary r_type="cDNA" r_start="46" r_stop="260" r_length="215" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="48275" i_stop="48726" i_length="452">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="48727" g_stop="48892" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="261" r_stop="426" r_length="166" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="427" polyA_stop="442"/>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="+" ref_id="SGN-E229054" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>419</cumulative_length_of_scored_exons>
        <coverage percentage="0.948" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E229054" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47946" e_stop="47983"/>
          <exon e_start="48060" e_stop="48274"/>
          <exon e_start="48727" e_stop="48892"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTGAAGGCTCATTTTCAAGATAATCCAAAAGACTTAGGTAATTAGGCTGTAGTTTGTGGGATGTACTTTGAGTGAACATAGTAGGTCTCATTATATTCAAATGTTCTGGGCAGATCTTCTGAAGCATGATAAGATGTTAAGCAAGAAAGCACCTGCCGCTCACCTACGTGATGTACCTGACTACCTATTAGATCCAACGACACAAGAAGCTAGCAAGATTGTGAAGCTGGCCAGAGCTGCAATGGGCAATACTAATCCATCTCGTGGCAAAGGATCAAAGGGAAGGTTCAAAAGAAGCAGAGACCCTCTTAAAACATTTTCAGCTGAGGTATACCTCCCCAACCTCTACTTGCACTAAGCTGTATGTGTTGGTGATTTTACATTCATGTTTTGTCTGTGTACCACTAGAAATTGAACTAGCAAGTTCTACTTATTCGAGTCTTGTCAACATGATGATATGATCAAATGTCTTCCTTCTTGGTTGAGGAAGGGTAAACTTGTGGATTGTGGGGTTAGGTATTACTGTATTTCGTCTCTCTTTTTAATACTTGTCAGAGGTTATCGATGAAGTTCTGCTTATTCATATAGATATGATCTGAGATTACTTGTGTAGTCAATACGTTCCACACGATCAAACAAGGAAATACATCTTGAACAGGATGTAGGTTATCGAAGGGAATGATCATATATATGAAATACAATCCTAGATGATTGTGTTCTTGGCTTTATTATGGGCAACGTTGGTGGCTTGGTGTTTGATCTCTTCTTCTTTGATTGCAGGCACCTAAGCGAGCAGGGAAAGGCGGGATGAAAAGAAAGGTAAAAGATACCGATAATGGCCATTAACATTAAAAGGAACACCCTGCCTAGTTGTTTGATACAAGGAATTGTAGTTTATACGAAATTTGAATTATATTTATCAATCAATTTTTTTTGAATGCTTTCA</genome_strand>
        <mrna_strand>ATTGAAGGCTCATTTTCAAGATAATCCAAAAGACTTAG............................................................................ATCTTCTGAAGCATGATAAGATGTTAAGCAAGAAAGCACCTGCCGCTCACCTACGTGATGTACCTGACTACCTATTAGATCCAACGACACAAGAAGCTAGCAAGATTGTGAAGCTGGCCAGAGCTGCAATGGGCAATACTAATCCATCTCGTGGCAAAGGATCAAAGGGAAGGTTCAAAAGAAGCAGAGACCCTCTTAAAACATTTTCAGCTGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAGCGAGCAGGGAAAGGCAGGATGAAAAGAAAGGTAAAAGATACCGATAATGGCCATTAACATTAAAAGGAACACCCTGCCTAGTTGTTTGATACAAGGAATTGTAGTTTATACGAAATTTGAATTATATTTATCAATCAATTTTTTTTGAATGCTTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E549300" ref_strand="+" ref_description="SGN-E549300 [TUS-69-C9](-)">
      <seq>ataaatggtcttgaaggtatatggaaactattcaaccaagtaggcgaaaactcggctgaattacaattaagtccctatggaggaaagttgagtgagatatcggaatctgaaacacctttccctcatagagatggaaacatattcatgatccattatggggtgaattggggtgaaatggaaagttctagtaagcatatatcttggattcgaaacctttatggatacatggctaggtatgcatcaaaatctcctagagctgcatatttgaactatagagatcttgatttaggagtgaacaacaaaggaaacacaagctatgcacaagcaagagtttggggggtgaaatatttcaagaacaactttgatagattggtcaaaatcaagacaaaagttgatccaacaaacttctttagaaatgaacaaagtgttcctcctctatatatataatttatgcactctacaaataaggcttatcatatatagtagttcttttatgtatatatatagtaatatagtactgaaaaataaatgtagccaaggtgcgtttcaaacatattgtgtaagatatatattgtttgatttataatatttttttcaattaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="-" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="51322" stop="50182"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="51022" g_stop="50438" g_length="585"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="582" r_length="582" r_score="0.961"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="601" polyA_stop="610"/>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="-" ref_id="SGN-E549300" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>585</cumulative_length_of_scored_exons>
        <coverage percentage="0.959" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E549300" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="51022" e_stop="50438"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAAATGGTCTTGAAGGTATATGGAAACTATTCAACCAAGTAGGCGAAAACTCGGCTGAATTACAATTAAGTCCCTATGGAGGAAAGTTGAGTGAGATATCGGAATCTGAAACACCTTTCCCTCATAGAGATGGAAACATATTCATGATCCATTATGGGGTGAATTGGGGTGAAATGGAAAGTTCTAATAAGCATATATCTTGGATTCGAAACCTTTATGGATACATGGCTAGGTATGTGTCAAGATCTCCTAGAGCTGCTTATTTGAACTATAGAGATCTTGATTTAGGAGTGAACAACAAAGGAAACACAAGCTATGAACAAGCAAGAGTTTGGGGAGTGAAATATTTCAACAACAACTTTGATAGATTGGTCAAAATCAAGACTAAAGTTGATCCAACAAATTTCTTTAGGAATGAACAAAGTGTTCCTCCTCTATATATATAATTTATGCACTCTACAAATAAGGCTTATCATATATAGTAGTTCTTTTATGTATATATATATAGTAATATAGTACTGAAAAATAAATGTAGCCAGGAAGCCTTCCAAAGATATTTTATAAGATGTATTATTGTTTGATTT</genome_strand>
        <mrna_strand>ATAAATGGTCTTGAAGGTATATGGAAACTATTCAACCAAGTAGGCGAAAACTCGGCTGAATTACAATTAAGTCCCTATGGAGGAAAGTTGAGTGAGATATCGGAATCTGAAACACCTTTCCCTCATAGAGATGGAAACATATTCATGATCCATTATGGGGTGAATTGGGGTGAAATGGAAAGTTCTAGTAAGCATATATCTTGGATTCGAAACCTTTATGGATACATGGCTAGGTATGCATCAAAATCTCCTAGAGCTGCATATTTGAACTATAGAGATCTTGATTTAGGAGTGAACAACAAAGGAAACACAAGCTATGCACAAGCAAGAGTTTGGGGGGTGAAATATTTCAAGAACAACTTTGATAGATTGGTCAAAATCAAGACAAAAGTTGATCCAACAAACTTCTTTAGAAATGAACAAAGTGTTCCTCCTCTATATATATAATTTATGCACTCTACAAATAAGGCTTATCATATATAGTAGTTCTTTTATG--TATATATATAGTAATATAGTACTGAAAAATAAATGTAGCCAAGGTGCGTTTCAAACATATTGTGTAAGATATA-TATTGTTTGATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E576602" ref_strand="+" ref_description="SGN-E576602 [59847]">
      <seq>tttttctctcaatttgcctttcatcatcatgggctaacaatacccatgatgacgttcttgaatgcctttctcacaaaattaggaactcaaacacaatatcacaagtcatccacactcctaaaaactcatcatattccaccatttataactccttttcacatcgtaacctaaggataacctccgacttcaaaccatcaattattttcactcctaatgatgaatctcaaatccaggcagctatacattgttccaagaaacaagggctacaaattagaattcgaggcggtggacatgactatgagggactttcatacatttcggagatcccctttgtcgtaattgatcttagaaacctaagatcaatatccattgataccgaaaaaaagactgcttggattcaagctggcgcgaccctaggggaagtttactatagaatcgcggaaaaaagtaaaaaattggcctttactgctggggtttgcccaactgttggtgttggtggacactttagtggtggaggctatggtatgatgtcccgaaaattcggtaatgctgctgataacatcattgatgcaaaattaatcgatgctaatggacatatccataatagaaaatcaatgggtgaggatctcttttgggctattagaggaggtggagggactagctttggtctcattatatcatggaaagtgaaattactcgatattccagaaaaggtgaccgtgttcaatgtgccacgaacattggaacaaaatgttactcaactttgtttacaaatgggcaacatatcgcggaacaaagttgatgacaatctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="-" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="59940" stop="51030"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52137" g_stop="51329" g_length="809"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="812" r_length="812" r_score="0.904"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="-" ref_id="SGN-E576602" ref_strand="+">
        <total_alignment_score>0.904</total_alignment_score>
        <cumulative_length_of_scored_exons>809</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E576602" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52137" e_stop="51329"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTTCTCTCAATTTGCCTAATTTCATCATCATGGGCTAACAAAACTCATGATGACTTTCTTAAATGCCTTTCTCACAAAATTATGAACTCAAACTCAAAATCACAAGTTATCTACACTCCTAAAAACTCATCATATTCCACCCTTTATGACTCTTTTTCA-A--GTAATCTAAGGATAACTTCCGATTTCAAACCATCAATTATTTTCACTCCTAATGATGAATCTCAAATCCAGGAAGCTATACATTGCTCCAAGAAACATGGCTTGCAAATTAGAATTCGAGGCGGTGGACATGACTATGAGGGACTTTCATACATTTCTGAAACCCCGTTTGTCATAATTGATCTTAGAAACCTAAGAGCAATATCCATTGATACGGAAGACAAGACTGCTTGGATTCAAGCTGGCGCGAGACTAGGGGAAGTTTACTATAGAATCGCGGAAAAAAGTAAAAAATTAGCCTTTGTTGCTGGGGTTTGCCCTACTGTTGGTGTTGGTGGACACTTTAGTGGTGGAGGGTATGGTATGATGTCACGAAAATTCGGTACTGCTGCTGATAACATCATTGATGCAAAGTTAATTGATGCTAATGGACGTATCCATGATCGAGAATCAATGGGTGAGGATCACTTTTGGGCTATTAGAGGAGGTGGAGGGACTAGTTTTGGTCTCATTATCTCATGGAAGGTGAAATTACTTGATATTCCACAAAAGGTAACCGTATTCAATGTGACACGAACGTTGGAACAAAATGCAACTCAGC-TAGTCTACAAAT-GGCAACACATCGCGG-ACAAAGTTGATGACAATCTC</genome_strand>
        <mrna_strand>TTTTTCTCTCAATTTGCC---TTTCATCATCATGGGCTAACAATACCCATGATGACGTTCTTGAATGCCTTTCTCACAAAATTAGGAACTCAAACACAATATCACAAGTCATCCACACTCCTAAAAACTCATCATATTCCACCATTTATAACTCCTTTTCACATCGTAACCTAAGGATAACCTCCGACTTCAAACCATCAATTATTTTCACTCCTAATGATGAATCTCAAATCCAGGCAGCTATACATTGTTCCAAGAAACAAGGGCTACAAATTAGAATTCGAGGCGGTGGACATGACTATGAGGGACTTTCATACATTTCGGAGATCCCCTTTGTCGTAATTGATCTTAGAAACCTAAGATCAATATCCATTGATACCGAAAAAAAGACTGCTTGGATTCAAGCTGGCGCGACCCTAGGGGAAGTTTACTATAGAATCGCGGAAAAAAGTAAAAAATTGGCCTTTACTGCTGGGGTTTGCCCAACTGTTGGTGTTGGTGGACACTTTAGTGGTGGAGGCTATGGTATGATGTCCCGAAAATTCGGTAATGCTGCTGATAACATCATTGATGCAAAATTAATCGATGCTAATGGACATATCCATAATAGAAAATCAATGGGTGAGGATCTCTTTTGGGCTATTAGAGGAGGTGGAGGGACTAGCTTTGGTCTCATTATATCATGGAAAGTGAAATTACTCGATATTCCAGAAAAGGTGACCGTGTTCAATGTGCCACGAACATTGGAACAAAATGTTACTCAACTTTGTTTACAAATGGGCAACATATCGCGGAACAAAGTTGATGACAATCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E546047" ref_strand="+" ref_description="SGN-E546047 [TUS-69-D9]">
      <seq>cttaacaatctttttctttctctcaatttgcctaatttcatcatcatgggctaacaaaactcatgatgactttcttgaatgcctttctcataaaattatgaattcaaactcaaaatcacaagttatctacactcctaaaaactcatcatattccaccctttataactctttttcaagtaatctaaggataacttccgatttcaaaccatcaattattttcactcctaatgatgaatctcaaatccaggcagctatacattgctccaagaaacatggcttacaaattagaattcgaggcggtggacatgattatgagggactttcatacatttctgaaaccccttttgtcataattgatcttagaaacctaagagcaatatccattgatacggaagacaagactgcttggattcaagctggggcgagactaggggaagtttactatagaatcgcggaaaaaagtaaaaaattagcctttgttgctggggtttgccctactgttggtgttggtggacactttagtggtggagggtatggcatgatgtcacgaaaattcggtactgctgctgataacatcattgatgcaaaactaattgatgctaatggacgtatccatgatcgagaatcaatgggtgaggatcacttttnggctattagaggaagtggagggactagttttggtctcattatctcatggaaagtgaaaatacttgatattcct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="-" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="52451" stop="51132"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52151" g_stop="51431" g_length="721"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="721" r_length="721" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="-" ref_id="SGN-E546047" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>721</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E546047" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52151" e_stop="51431"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTAACAATCTTTTTCTTTCTCTCAATTTGCCTAATTTCATCATCATGGGCTAACAAAACTCATGATGACTTTCTTAAATGCCTTTCTCACAAAATTATGAACTCAAACTCAAAATCACAAGTTATCTACACTCCTAAAAACTCATCATATTCCACCCTTTATGACTCTTTTTCAAGTAATCTAAGGATAACTTCCGATTTCAAACCATCAATTATTTTCACTCCTAATGATGAATCTCAAATCCAGGAAGCTATACATTGCTCCAAGAAACATGGCTTGCAAATTAGAATTCGAGGCGGTGGACATGACTATGAGGGACTTTCATACATTTCTGAAACCCCGTTTGTCATAATTGATCTTAGAAACCTAAGAGCAATATCCATTGATACGGAAGACAAGACTGCTTGGATTCAAGCTGGCGCGAGACTAGGGGAAGTTTACTATAGAATCGCGGAAAAAAGTAAAAAATTAGCCTTTGTTGCTGGGGTTTGCCCTACTGTTGGTGTTGGTGGACACTTTAGTGGTGGAGGGTATGGTATGATGTCACGAAAATTCGGTACTGCTGCTGATAACATCATTGATGCAAAGTTAATTGATGCTAATGGACGTATCCATGATCGAGAATCAATGGGTGAGGATCACTTTTGGGCTATTAGAGGAGGTGGAGGGACTAGTTTTGGTCTCATTATCTCATGGAAGGTGAAATTACTTGATATTCCA</genome_strand>
        <mrna_strand>CTTAACAATCTTTTTCTTTCTCTCAATTTGCCTAATTTCATCATCATGGGCTAACAAAACTCATGATGACTTTCTTGAATGCCTTTCTCATAAAATTATGAATTCAAACTCAAAATCACAAGTTATCTACACTCCTAAAAACTCATCATATTCCACCCTTTATAACTCTTTTTCAAGTAATCTAAGGATAACTTCCGATTTCAAACCATCAATTATTTTCACTCCTAATGATGAATCTCAAATCCAGGCAGCTATACATTGCTCCAAGAAACATGGCTTACAAATTAGAATTCGAGGCGGTGGACATGATTATGAGGGACTTTCATACATTTCTGAAACCCCTTTTGTCATAATTGATCTTAGAAACCTAAGAGCAATATCCATTGATACGGAAGACAAGACTGCTTGGATTCAAGCTGGGGCGAGACTAGGGGAAGTTTACTATAGAATCGCGGAAAAAAGTAAAAAATTAGCCTTTGTTGCTGGGGTTTGCCCTACTGTTGGTGTTGGTGGACACTTTAGTGGTGGAGGGTATGGCATGATGTCACGAAAATTCGGTACTGCTGCTGATAACATCATTGATGCAAAACTAATTGATGCTAATGGACGTATCCATGATCGAGAATCAATGGGTGAGGATCACTTTTNGGCTATTAGAGGAAGTGGAGGGACTAGTTTTGGTCTCATTATCTCATGGAAAGTGAAAATACTTGATATTCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E355914" ref_strand="+" ref_description="SGN-E355914 [cLHT-12-N4]">
      <seq>ttaacaatctttttctttctctcaatttgcctaatttcatcatcatgggctaacaaaactcatgatgactttcttgaatgcctttctcataaaattatgaattcaaactcaaaatcacaagttatctacactcctaaaaactcatcatattccaccctttataactctttttcaagtaatctaaggataacttccgatttcaaaccatcaattattttcactcctaatgatgaatctcaaatccaggcagctatacattgctccaagaaacatggcttacaaattagaattcgaggcggtggacatgattatgagggactttcatacatttctgaaaccccttttgtcataattgatcttagaaacctaagagcaatatccattgatacggaagacaagactgcttggattcaagctggggcgagactaggggaagtttactatagaatcgcggaaaaaagtaaaaaattagcctttgttgctggggtttgccctactgttggtgttggtggacactttagtggtggagggtatggcatgatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="-" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="52450" stop="51307"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52150" g_stop="51607" g_length="544"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="544" r_length="544" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="-" ref_id="SGN-E355914" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>544</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E355914" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52150" e_stop="51607"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAACAATCTTTTTCTTTCTCTCAATTTGCCTAATTTCATCATCATGGGCTAACAAAACTCATGATGACTTTCTTAAATGCCTTTCTCACAAAATTATGAACTCAAACTCAAAATCACAAGTTATCTACACTCCTAAAAACTCATCATATTCCACCCTTTATGACTCTTTTTCAAGTAATCTAAGGATAACTTCCGATTTCAAACCATCAATTATTTTCACTCCTAATGATGAATCTCAAATCCAGGAAGCTATACATTGCTCCAAGAAACATGGCTTGCAAATTAGAATTCGAGGCGGTGGACATGACTATGAGGGACTTTCATACATTTCTGAAACCCCGTTTGTCATAATTGATCTTAGAAACCTAAGAGCAATATCCATTGATACGGAAGACAAGACTGCTTGGATTCAAGCTGGCGCGAGACTAGGGGAAGTTTACTATAGAATCGCGGAAAAAAGTAAAAAATTAGCCTTTGTTGCTGGGGTTTGCCCTACTGTTGGTGTTGGTGGACACTTTAGTGGTGGAGGGTATGGTATGATGT</genome_strand>
        <mrna_strand>TTAACAATCTTTTTCTTTCTCTCAATTTGCCTAATTTCATCATCATGGGCTAACAAAACTCATGATGACTTTCTTGAATGCCTTTCTCATAAAATTATGAATTCAAACTCAAAATCACAAGTTATCTACACTCCTAAAAACTCATCATATTCCACCCTTTATAACTCTTTTTCAAGTAATCTAAGGATAACTTCCGATTTCAAACCATCAATTATTTTCACTCCTAATGATGAATCTCAAATCCAGGCAGCTATACATTGCTCCAAGAAACATGGCTTACAAATTAGAATTCGAGGCGGTGGACATGATTATGAGGGACTTTCATACATTTCTGAAACCCCTTTTGTCATAATTGATCTTAGAAACCTAAGAGCAATATCCATTGATACGGAAGACAAGACTGCTTGGATTCAAGCTGGGGCGAGACTAGGGGAAGTTTACTATAGAATCGCGGAAAAAAGTAAAAAATTAGCCTTTGTTGCTGGGGTTTGCCCTACTGTTGGTGTTGGTGGACACTTTAGTGGTGGAGGGTATGGCATGATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E698928" ref_strand="+" ref_description="SGN-E698928 [FA08AB08]">
      <seq>cgcaaataatcaaatgatgactagtttcaacaagttaacaatcctttttctttctctcaatttgcctaatttcatcatcatgggctaacaaaactcatgatgactttcttgaatgcctttctcacaaaattatgaactcaaccttaatatcacaagtaatccacactcctaaaaactcatcatattcaaccatttataactcctattcagataacgtaaggataacctccgacttcaaaccatcaattattttcactcctaccaaagaatctcaaatccaggcagctatacattgctccaagatacatgacctacaaattaggattcgaagcggtggacatgactatgagggactttcatacacttcggacaccccttttttcataattgatcttacaaacctaagatcaatatccgttgatacccaaaaaaagactgcttggattcaagctggcgcgactctaggggaagtttactatagaatcgcggaaaaaagtaaaaaattggctgtacttgctggggtttgcccaactgttggtgttggcggacactttagtggtggaggctatggcatgatgtcacgaaaattcggtactgctgctgataacatcattgatgcaaaattaattgatgctaatggacgaatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="-" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="60006" stop="58763"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59708" g_stop="59063" g_length="646"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="647" r_length="647" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="-" ref_id="SGN-E698928" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>646</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E698928" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59708" e_stop="59063"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAAATAATCAAATGATGACTAGTTTCAACAAGTTAACAAT-CTTTTTCTTTCTCTCAATTTGCCTAATTTCATCATCATGGGCTAACAAAACTCATGATGACTTTCTTGAATGCCTTTCTCACAAAATTATGAACTCAACCTTAATATCACAAGTAATCCACACTCCTAAAAACTCATCATATTCAACCATTTATAACTCCTATTCAGATAACGTAAGGATAACCTCCGACTTCAAACCATCAATTATTTTCACTCCTACCAAAGAATCTCAAATCCAGGCAGCTATACATTGCTCCAAGATACATGACCTACAAATTAGGATTCGAAGCGGTGGACATGACTATGAGGGACTTTCATACACTTCGGACACCCCTTTTTTCATAATTGATCTTAGAAACCTAAGATCAATATCCGTTGATACCCAAAAAAAGACTGCTTGGATTCAAGCTGGCGCGACTCTAGGGGAAGTTTACTATAGAATCGCGGAAAAAAGTAAAAAATTGGCTGTAGTTGCTGGGGTTTGCCCAACTGTTGGTGTTGGTGGACACTTTAGTGGTGGAGGCTATGGCATGATGTCACGAAAATTCGGTACTGCTGCTGATAACATCATTGATGCAAAATTAATTGATGCTAATGGACGAATT</genome_strand>
        <mrna_strand>CGCAAATAATCAAATGATGACTAGTTTCAACAAGTTAACAATCCTTTTTCTTTCTCTCAATTTGCCTAATTTCATCATCATGGGCTAACAAAACTCATGATGACTTTCTTGAATGCCTTTCTCACAAAATTATGAACTCAACCTTAATATCACAAGTAATCCACACTCCTAAAAACTCATCATATTCAACCATTTATAACTCCTATTCAGATAACGTAAGGATAACCTCCGACTTCAAACCATCAATTATTTTCACTCCTACCAAAGAATCTCAAATCCAGGCAGCTATACATTGCTCCAAGATACATGACCTACAAATTAGGATTCGAAGCGGTGGACATGACTATGAGGGACTTTCATACACTTCGGACACCCCTTTTTTCATAATTGATCTTACAAACCTAAGATCAATATCCGTTGATACCCAAAAAAAGACTGCTTGGATTCAAGCTGGCGCGACTCTAGGGGAAGTTTACTATAGAATCGCGGAAAAAAGTAAAAAATTGGCTGTACTTGCTGGGGTTTGCCCAACTGTTGGTGTTGGCGGACACTTTAGTGGTGGAGGCTATGGCATGATGTCACGAAAATTCGGTACTGCTGCTGATAACATCATTGATGCAAAATTAATTGATGCTAATGGACGAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E544842" ref_strand="+" ref_description="SGN-E544842 [TUS-67-G4](-)">
      <seq>attcctttccctcatagagctggaaatatattcacgatcgagtatggagtgtattggagtaaaatcgaaaattctcaaagaaatatagcttggattcgaaaactttatgaatacatgggtaagtatgtgtcaaaatctcctagagctgcatatttgaactatagagatcttgatttaggaatgaacaatattaatggaaacccaagctatgatgaagcaagagtttggggagtgaaatatttcaagagcaactttgatagattagtacaagtcaagactaagtttgatccaactaatttctttaggaatcaacaaagtattcctcctctattatctttaggttataatatatggtagttaatttatatataatactatagtactgaaaaataaatgtacgtagcaaggatcgatttgtttcaaagattatgtacgatatatattgtttgatttaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="-" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="71189" stop="70130"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70889" g_stop="70437" g_length="453"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="453" r_length="453" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="454" polyA_stop="481"/>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="-" ref_id="SGN-E544842" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>453</cumulative_length_of_scored_exons>
        <coverage percentage="0.942" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E544842" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70889" e_stop="70437"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTCCTTTCCCTCATAGAGCTGGAAATATATTCACGATCGAGTATGGAGTGTATTGGAGTAGAATCGAAAATTCTCAAAGAAATATAGCTTGGATTCGAAAACTTTATGAATACATGGGTAAGTATGTGTCAAAATCTCCTAGAGCTGCATATTTGAACTATAGAGATCTTGATTTAGGAATGAACAATATTAATGGAAACACAAGCTATGAACAAGCAAGAGTTTGGGGAGTGAAATATTTCAACAACAACTTTGATAGATTAGTACAAGTCAAGACTAAGTTTGATCCAACTAATTTCTTTAGGAATCAACAAAGTATTCCTCCTCTATTATCTTTAGGTTATAATATATGGTAGTTAATTTATATATAATACTATAGTACTGAAAAATAAATGTACGTAGCAAGGATCGATTTGTTTCAAAGATTATGTACGATATATATTGTTTGATTT</genome_strand>
        <mrna_strand>ATTCCTTTCCCTCATAGAGCTGGAAATATATTCACGATCGAGTATGGAGTGTATTGGAGTAAAATCGAAAATTCTCAAAGAAATATAGCTTGGATTCGAAAACTTTATGAATACATGGGTAAGTATGTGTCAAAATCTCCTAGAGCTGCATATTTGAACTATAGAGATCTTGATTTAGGAATGAACAATATTAATGGAAACCCAAGCTATGATGAAGCAAGAGTTTGGGGAGTGAAATATTTCAAGAGCAACTTTGATAGATTAGTACAAGTCAAGACTAAGTTTGATCCAACTAATTTCTTTAGGAATCAACAAAGTATTCCTCCTCTATTATCTTTAGGTTATAATATATGGTAGTTAATTTATATATAATACTATAGTACTGAAAAATAAATGTACGTAGCAAGGATCGATTTGTTTCAAAGATTATGTACGATATATATTGTTTGATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E549109" ref_strand="+" ref_description="SGN-E549109 [TUS-67-G4]">
      <seq>attcctttccctcatagagctggaaatatattcacgatcgagtatggagtgtattggagtaaaatcgaaaattctcaaagaaatatagcttggattcgaaaactttatgaatacatgggtaagtatgtgtcaaaatctcctagagctgcatatttgaactatagagatcttgatttaggaatgaacaatattaatggaaacacaagctatgatgaagcaagagtttggggagtgaaatatttcaagagcaactttgatagattagtacaagtcaagactaagtttgatccaactaatttctttaggaatcaacaaagtattcctcctctattatctttaggttataatatatggtagttaatttatatataatactatagtactgaaaaataaatgtacgtagcaaggatcgatttgtttcaaagattatgtacgatatatattgtttgatttanaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="-" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="71189" stop="70130"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70889" g_stop="70437" g_length="453"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="453" r_length="453" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="454" polyA_stop="481"/>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="-" ref_id="SGN-E549109" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>453</cumulative_length_of_scored_exons>
        <coverage percentage="0.942" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E549109" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70889" e_stop="70437"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTCCTTTCCCTCATAGAGCTGGAAATATATTCACGATCGAGTATGGAGTGTATTGGAGTAGAATCGAAAATTCTCAAAGAAATATAGCTTGGATTCGAAAACTTTATGAATACATGGGTAAGTATGTGTCAAAATCTCCTAGAGCTGCATATTTGAACTATAGAGATCTTGATTTAGGAATGAACAATATTAATGGAAACACAAGCTATGAACAAGCAAGAGTTTGGGGAGTGAAATATTTCAACAACAACTTTGATAGATTAGTACAAGTCAAGACTAAGTTTGATCCAACTAATTTCTTTAGGAATCAACAAAGTATTCCTCCTCTATTATCTTTAGGTTATAATATATGGTAGTTAATTTATATATAATACTATAGTACTGAAAAATAAATGTACGTAGCAAGGATCGATTTGTTTCAAAGATTATGTACGATATATATTGTTTGATTT</genome_strand>
        <mrna_strand>ATTCCTTTCCCTCATAGAGCTGGAAATATATTCACGATCGAGTATGGAGTGTATTGGAGTAAAATCGAAAATTCTCAAAGAAATATAGCTTGGATTCGAAAACTTTATGAATACATGGGTAAGTATGTGTCAAAATCTCCTAGAGCTGCATATTTGAACTATAGAGATCTTGATTTAGGAATGAACAATATTAATGGAAACACAAGCTATGATGAAGCAAGAGTTTGGGGAGTGAAATATTTCAAGAGCAACTTTGATAGATTAGTACAAGTCAAGACTAAGTTTGATCCAACTAATTTCTTTAGGAATCAACAAAGTATTCCTCCTCTATTATCTTTAGGTTATAATATATGGTAGTTAATTTATATATAATACTATAGTACTGAAAAATAAATGTACGTAGCAAGGATCGATTTGTTTCAAAGATTATGTACGATATATATTGTTTGATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E308623" ref_strand="+" ref_description="SGN-E308623 [cLEY-21-F20]">
      <seq>ttcctttccctcatagagctggaaatatattcacgatcgagtatggagtgtattggagtaaaatcgaaaattctcaaagaaatatagcttggattcgaaaactttatgaatacatgggtaagtatgtgtcaaaatctcctagagctgcatatttgaactatagagatcttgatttaggaatgaacaatattaatggaaacacaagctatgatgaagcaagagtttggggagtgaaatatttcaagagcaactttgatagattagtacaagtcaagactaagtttgatccaactaatttctttaggaatcaacaaagtattcctcctctattatctttaggttataatatatggtagttaatttatatataatactatagtactgaaaaataaatgtacgtagcaaggatcgatttgtttcaaagattatgtacgatatatattgtttgatttaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="-" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="71188" stop="70130"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70888" g_stop="70437" g_length="452"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="452" r_length="452" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="453" polyA_stop="480"/>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="-" ref_id="SGN-E308623" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>452</cumulative_length_of_scored_exons>
        <coverage percentage="0.942" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E308623" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70888" e_stop="70437"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCCTTTCCCTCATAGAGCTGGAAATATATTCACGATCGAGTATGGAGTGTATTGGAGTAGAATCGAAAATTCTCAAAGAAATATAGCTTGGATTCGAAAACTTTATGAATACATGGGTAAGTATGTGTCAAAATCTCCTAGAGCTGCATATTTGAACTATAGAGATCTTGATTTAGGAATGAACAATATTAATGGAAACACAAGCTATGAACAAGCAAGAGTTTGGGGAGTGAAATATTTCAACAACAACTTTGATAGATTAGTACAAGTCAAGACTAAGTTTGATCCAACTAATTTCTTTAGGAATCAACAAAGTATTCCTCCTCTATTATCTTTAGGTTATAATATATGGTAGTTAATTTATATATAATACTATAGTACTGAAAAATAAATGTACGTAGCAAGGATCGATTTGTTTCAAAGATTATGTACGATATATATTGTTTGATTT</genome_strand>
        <mrna_strand>TTCCTTTCCCTCATAGAGCTGGAAATATATTCACGATCGAGTATGGAGTGTATTGGAGTAAAATCGAAAATTCTCAAAGAAATATAGCTTGGATTCGAAAACTTTATGAATACATGGGTAAGTATGTGTCAAAATCTCCTAGAGCTGCATATTTGAACTATAGAGATCTTGATTTAGGAATGAACAATATTAATGGAAACACAAGCTATGATGAAGCAAGAGTTTGGGGAGTGAAATATTTCAAGAGCAACTTTGATAGATTAGTACAAGTCAAGACTAAGTTTGATCCAACTAATTTCTTTAGGAATCAACAAAGTATTCCTCCTCTATTATCTTTAGGTTATAATATATGGTAGTTAATTTATATATAATACTATAGTACTGAAAAATAAATGTACGTAGCAAGGATCGATTTGTTTCAAAGATTATGTACGATATATATTGTTTGATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E613152" ref_strand="+" ref_description="SGN-E613152 [62923]">
      <seq>tcttttgggctattagaggaggtggagggactagctttggtctcattatatcatggaaagtgaaattactcgatattccagaaaaggtgaccgtgttcaatgtgccacgaacattggaacaaaatgttactcaacttgtttacaaatggcaacatatcgcggacaaagttgatgacaatctcatcctcaggatcttcataagaaatagtgaatttccattcgggggtgggcaaaggactatccacgcctctttcactgcactgtacgttggaggagtggatgaactcctccacgaaatgcaaaagagcttcccggaactaggattagtgaaagacgattgcattgagatgagttggattgaatctacactcttctttgccaatttccctaggaatacatcccttgatgtgttactaaattggaataccacaactaatcaaaccggattcttcaaaggaaaatcagactatgtccaacaaccaatttctattaatggtcttgaaggtatatggaaactattcaaccaattagtaggcgaaaactcgggtgctgaagtacagtttagtccttatggaggaaagttgagtgacatctgcagaatctgaaactcctttccctcatagagctggaaatatattcatgattgagtatgcggtgtatttggggaaatattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="-" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="79382" stop="58073"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79083" g_stop="78409" g_length="675"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="674" r_length="674" r_score="0.921"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="-" ref_id="SGN-E613152" ref_strand="+">
        <total_alignment_score>0.921</total_alignment_score>
        <cumulative_length_of_scored_exons>675</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E613152" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79083" e_stop="78409"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTTTTGGGCTATTAGAGGAGGTGGAGGGACTAGTTTTGGTCTCATTATCTCGTGGAAAATAAAATTAGTTGATATTCCAGAAAAGGTAACCGTGTTCAATGTGCCACGAACATTGGAACAAAATGTTACTCAACTTGTTTACAAATGGCAACATATCGCAGACAAAGTTGATGACAATCTCCTCCTCAGGATCTTCGTGAGAAATAGTGAATTTCCATTCGGGGGTGGGCAAAGGACTATCCACGCCTCTTTCGTTGCACTATACGTTGGAGGAGTGGATGAACTCCTCCACGAAGTTCAAAAGAGCTTCGCGGAGCTAGGGTTAGTGAAAGACGATTGCATTGAGATGAGTTGGATTGAATCTACACTCTTCTTTGCGGGTTTCCCTAGGAATACATCACTTGATGTGTTACTAAATTGGAATACCACAACTAATCAAAAAGGATACTTCAAAGGGAAATCAGACTATGTCCAACAAACAATTTCTTTGAATGGTATTGAAGGTGTATTGAAACTATTATTCAACCAATTAGGAGGCGAAAACTCGGGTGCTGAATTACAATTTAGTCCTTACGGAGGAAAGTTGAGCGATATCT-CAGAATTTGAAATTCCTTTCCCTCATAGAGCTGGAAACATATTCATGATTGAGTACGCGGTGTA-TTGGGGAAATATTA</genome_strand>
        <mrna_strand>TCTTTTGGGCTATTAGAGGAGGTGGAGGGACTAGCTTTGGTCTCATTATATCATGGAAAGTGAAATTACTCGATATTCCAGAAAAGGTGACCGTGTTCAATGTGCCACGAACATTGGAACAAAATGTTACTCAACTTGTTTACAAATGGCAACATATCGCGGACAAAGTTGATGACAATCTCATCCTCAGGATCTTCATAAGAAATAGTGAATTTCCATTCGGGGGTGGGCAAAGGACTATCCACGCCTCTTTCACTGCACTGTACGTTGGAGGAGTGGATGAACTCCTCCACGAAATGCAAAAGAGCTTCCCGGAACTAGGATTAGTGAAAGACGATTGCATTGAGATGAGTTGGATTGAATCTACACTCTTCTTTGCCAATTTCCCTAGGAATACATCCCTTGATGTGTTACTAAATTGGAATACCACAACTAATCAAACCGGATTCTTCAAAGGAAAATCAGACTATGTCCAACAACCAATTTCTATTAATGGTCTTGAAGGTATATGGAAAC---TATTCAACCAATTAGTAGGCGAAAACTCGGGTGCTGAAGTACAGTTTAGTCCTTATGGAGGAAAGTTGAGTGACATCTGCAGAATCTGAAACTCCTTTCCCTCATAGAGCTGGAAATATATTCATGATTGAGTATGCGGTGTATTTGGGGAAATATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E623032" ref_strand="+" ref_description="SGN-E623032 [73406]">
      <seq>tggcctttactgctggggtttgcccaactgttggtgttggtggacactttagtggtggaggctatggtatgatgtcccgaaaattcggtaatgctgctgataacatcattgatgcaaaattaatcgatgctaatggacatatccataatagaaaatcaatgggtgaggatctcttttgggctattagaggaggtggagggactagctttggtctcattatatcatggaaagtgaaattactcgatattccagaaaaggtgaccgtgttcaatgtgccacgaacattggaacaaaatgttactcaacttgtttacaaatggcaacatatcgcggacaaagttgatgacaatctcatcctcaggatcttcataagaaatagtgaatttccattcgggggtgggcaaaggactatccacgcctctttcactgcactgtacgttggaggagtggatgaactcctccacgaaatgcaaaagagcttcccggaactaggattagtgaaagacgattgcattgagatgagttggattgaatctacactcttctttgccaatttccctaggaatacatcccttgatgtgttactaaattggaataccacaagtaatcaaaccggattcttcaaaggaaaatcagactatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="-" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="79554" stop="78312"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79254" g_stop="78612" g_length="643"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="643" r_length="643" r_score="0.930"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="-" ref_id="SGN-E623032" ref_strand="+">
        <total_alignment_score>0.930</total_alignment_score>
        <cumulative_length_of_scored_exons>643</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E623032" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79254" e_stop="78612"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGCCTTTGCTGCTGGGGTTTGCCCAACTGTGGGTGTTGGTGGACACTTTAGTGGTGGAGGGTATGGTATGTTGTCAAGAAAATACGGTACTGCTGCTGATAACATCATTGATGCAAAATTAATTGGTGCTAATGGACGTATCCATGATCGAGAATCAATGGGTGAGGATCACTTTTGGGCTATTAGAGGAGGTGGAGGGACTAGTTTTGGTCTCATTATCTCGTGGAAAATAAAATTAGTTGATATTCCAGAAAAGGTAACCGTGTTCAATGTGCCACGAACATTGGAACAAAATGTTACTCAACTTGTTTACAAATGGCAACATATCGCAGACAAAGTTGATGACAATCTCCTCCTCAGGATCTTCGTGAGAAATAGTGAATTTCCATTCGGGGGTGGGCAAAGGACTATCCACGCCTCTTTCGTTGCACTATACGTTGGAGGAGTGGATGAACTCCTCCACGAAGTTCAAAAGAGCTTCGCGGAGCTAGGGTTAGTGAAAGACGATTGCATTGAGATGAGTTGGATTGAATCTACACTCTTCTTTGCGGGTTTCCCTAGGAATACATCACTTGATGTGTTACTAAATTGGAATACCACAACTAATCAAAAAGGATACTTCAAAGGGAAATCAGACTATGT</genome_strand>
        <mrna_strand>TGGCCTTTACTGCTGGGGTTTGCCCAACTGTTGGTGTTGGTGGACACTTTAGTGGTGGAGGCTATGGTATGATGTCCCGAAAATTCGGTAATGCTGCTGATAACATCATTGATGCAAAATTAATCGATGCTAATGGACATATCCATAATAGAAAATCAATGGGTGAGGATCTCTTTTGGGCTATTAGAGGAGGTGGAGGGACTAGCTTTGGTCTCATTATATCATGGAAAGTGAAATTACTCGATATTCCAGAAAAGGTGACCGTGTTCAATGTGCCACGAACATTGGAACAAAATGTTACTCAACTTGTTTACAAATGGCAACATATCGCGGACAAAGTTGATGACAATCTCATCCTCAGGATCTTCATAAGAAATAGTGAATTTCCATTCGGGGGTGGGCAAAGGACTATCCACGCCTCTTTCACTGCACTGTACGTTGGAGGAGTGGATGAACTCCTCCACGAAATGCAAAAGAGCTTCCCGGAACTAGGATTAGTGAAAGACGATTGCATTGAGATGAGTTGGATTGAATCTACACTCTTCTTTGCCAATTTCCCTAGGAATACATCCCTTGATGTGTTACTAAATTGGAATACCACAAGTAATCAAACCGGATTCTTCAAAGGAAAATCAGACTATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E449822" ref_strand="+" ref_description="SGN-E449822 [cSTS-7-J9]">
      <seq>aaattaggaactcaaacacaatatcacaagtcatccacactcctaaaaactcatcatattccaccatttataactccttttcagatcgtaacctaaggataacctccaacttcaaaccatcaattattttcactcctaccaaagaatctcaaatccaggcagctatacattgttccaagaaacatgggctacaaattagaattcgaggcggtggacatgactacgagggactttcatacatttcgaagatcccctttgtcgtaattgatcttagaaacctaagatcaatatccattgatacccaaaaaaagactgcttggattcaagctggtgccaccctaggggaagtttactatagaatcgcagaaaaaagtaaaaaattggcctttactgctggggtttgcccaactgttggtgttggtggacactttagtggtggaggctacggtatgatgtcacgaaaattcggtactgctgctgataacatcattgatgcaaaattaatcgatgctaatggacgtatccaggatcgaaaatcgatgggtgaggatctcttttgggctattagaggaggtggagggactagctttggtctcattatatcatggaaagtgaaattactcgatattccagaaaaggtgaccgtgttcaatgtgccacgaacattggaacaaaatgttactcaacttgtttacaaatggcaacatatcacagacaaagttgatgaccatctcatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="-" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="79932" stop="78599"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79632" g_stop="78899" g_length="734"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="737" r_length="737" r_score="0.918"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="-" ref_id="SGN-E449822" ref_strand="+">
        <total_alignment_score>0.918</total_alignment_score>
        <cumulative_length_of_scored_exons>734</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E449822" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79632" e_stop="78899"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATTATGAACTCAACCTTAATATCACAAGTCATACACACTCCTAAAAACTCATCATATTCCACCCTTTTAAACTCATTTTC--AT-TTAACCTAAGGATAAGCTCCAACTTCGAACCATCAACAATTTTCACTCCTACCAACGAATCTCAAATCCAGGAAGCTATACATTGCTCCAAGAAACATGGTCTACAAATTAGAATTCGAGGCGGTGGACATGACTATGAGGGACTTTCATACATTTCCGAGATTCCCTTTGTCGTAATTGATCTTAGAAACCTAAGATCAATATCCATTGACACCGAAAAAAAGACAGCTTGGATTCAAGCTGGCGCGACCCTAGGAGAAGTTTACTATAGAATCGCGGAAAAAAGTAAAAAATTAGCCTTTGCTGCTGGGGTTTGCCCAACTGTGGGTGTTGGTGGACACTTTAGTGGTGGAGGGTATGGTATGTTGTCAAGAAAATACGGTACTGCTGCTGATAACATCATTGATGCAAAATTAATTGGTGCTAATGGACGTATCCATGATCGAGAATCAATGGGTGAGGATCACTTTTGGGCTATTAGAGGAGGTGGAGGGACTAGTTTTGGTCTCATTATCTCGTGGAAAATAAAATTAGTTGATATTCCAGAAAAGGTAACCGTGTTCAATGTGCCACGAACATTGGAACAAAATGTTACTCAACTTGTTTACAAATGGCAACATATCGCAGACAAAGTTGATGACAATCTCCTC</genome_strand>
        <mrna_strand>AAATTAGGAACTCAAACACAATATCACAAGTCATCCACACTCCTAAAAACTCATCATATTCCACCATTTATAACTCCTTTTCAGATCGTAACCTAAGGATAACCTCCAACTTCAAACCATCAATTATTTTCACTCCTACCAAAGAATCTCAAATCCAGGCAGCTATACATTGTTCCAAGAAACATGGGCTACAAATTAGAATTCGAGGCGGTGGACATGACTACGAGGGACTTTCATACATTTCGAAGATCCCCTTTGTCGTAATTGATCTTAGAAACCTAAGATCAATATCCATTGATACCCAAAAAAAGACTGCTTGGATTCAAGCTGGTGCCACCCTAGGGGAAGTTTACTATAGAATCGCAGAAAAAAGTAAAAAATTGGCCTTTACTGCTGGGGTTTGCCCAACTGTTGGTGTTGGTGGACACTTTAGTGGTGGAGGCTACGGTATGATGTCACGAAAATTCGGTACTGCTGCTGATAACATCATTGATGCAAAATTAATCGATGCTAATGGACGTATCCAGGATCGAAAATCGATGGGTGAGGATCTCTTTTGGGCTATTAGAGGAGGTGGAGGGACTAGCTTTGGTCTCATTATATCATGGAAAGTGAAATTACTCGATATTCCAGAAAAGGTGACCGTGTTCAATGTGCCACGAACATTGGAACAAAATGTTACTCAACTTGTTTACAAATGGCAACATATCACAGACAAAGTTGATGACCATCTCATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E337202" ref_strand="+" ref_description="SGN-E337202 [cTOE-7-G5]">
      <seq>aaagaaccaaaagcaaattcgtatttgctcgccctgctaaggtcactgagaccttgctcaagtacatcccaatccatgaaattcctattcaatatggtggactcaagagggagaatgactttgagttttcagcctccgactgtgaagcttcggagattctccttaaagctggatcaactgaaactattgaaatacctgcagtagatgtggaaagtacatttatctgggatgttacgattgtgggcggagaagtgagctataaagaggaatttgttccagaggatgagacttcttacactataatcattcagaaggacaagaaggtgagctcgacaattcgcaacacattcaagaacactgaagcaggaaaggttgtgctgacaatcaagaacacttctagcaagaagaagaaggcgttttatcgacacaagatcaccaaatcaacaatttgagatgagcaagtttctattttgagtgaagatggagttctttttctctgtttttaagaatatgtataatgtagtaacctttttgtggtggttcatatacttgattatttttggtcctacattcatattgtatatgctgatttattcttttttctccctacaaggaagaatatgatctctctattttttaccaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="-" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="82905" stop="81488"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82605" g_stop="82545" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="61" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82544" i_stop="82458" i_length="87">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82457" g_stop="82313" g_length="145"/>
          <reference_exon_boundary r_type="cDNA" r_start="62" r_stop="206" r_length="145" r_score="0.979"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="82312" i_stop="82224" i_length="89">
            <donor d_prob="0.947" d_score="0.98"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="82223" g_stop="81789" g_length="435"/>
          <reference_exon_boundary r_type="cDNA" r_start="207" r_stop="641" r_length="435" r_score="0.993"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="81788" i_stop="81607" i_length="182">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.648" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="81606" g_stop="81597" g_length="10"/>
          <reference_exon_boundary r_type="cDNA" r_start="642" r_stop="651" r_length="10" r_score="0.700"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="-" ref_id="SGN-E337202" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>651</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E337202" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82605" e_stop="82545"/>
          <exon e_start="82457" e_stop="82313"/>
          <exon e_start="82223" e_stop="81789"/>
          <exon e_start="81606" e_stop="81597"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGAACCAAAAGCAAATTCGTATTTGCTCGCCCTGCTAAGGTCACTGAGACCTTGCTCAAGTAAGTTTCAAACATAAATCCAGTATTTGTCTGTTTAACTTTACTGTCTAATGTGGTCTAAATGTTGAACTATTTGGCTTGAGTTAGGTACATTCCAATCCATGAAATCCCTATTCAATATGGTGGACTCAAGAGGGAGAATGACTTTGAGTTTTCAGCCTCCGACTGTGAAGCTTCGGAGATTCTCCTTAAAGCTGGATCAATTGAAACTATTGAAATACCTGCAGTAGATGTAAGTATTAACTAACTTTGGATATATTGAGAGAGCTTTGATATTACGCGGAGATTTTGAATGTTTTGTGTTAAACTTTATTATGTCAGGTGGAAAGTACATTTATCTGGGATGTTACGATTGTGGGCGGAGAAGTGAGCTATAAGGAGGAATTTGTGCCAGAGGATGAGACTTCTTACACTATAATCATTCAGAAGGACAAGAAGGTGAGCTCGACAATTCGCAACACGTTCAAGAACACTGAAGCAGGAAAGGTTGTGCTGACAATCAAGAACACTTCTAGCAAGAAGAAGAAGGCGTTTTATCGACACAAGATCACCAAATCAACAATTTGAGATGAGCAAGTTTCTATTTTGAGTGAAGATGGAGTTCTTTTTCTCTGTTTTTAAGAATATGTATAATGTAGTAACCTTTTTGTGGTGGTTCATATACTTGATTATTTTTGGTCCTACATTCATATTGTATATGCTGATTTATTCTTTTTTCTCCCTACAAGGAAGAATATGATCTCTCTATTTTTTACCATCTTATCATTTGAATTTTTCTTAATAGCACACCATGGTGATTGATCCACCATCATCATACCTTGATATTTGATATAACAATCAGCATATTAAATATAACAAATTAATAACATTTTCCATGACACTTTTTTATCAAACCTTCCAACAATTTGTGAAAAGGAATTCCAAATAATTTATTTTAGATGGAAAAAA</genome_strand>
        <mrna_strand>AAAGAACCAAAAGCAAATTCGTATTTGCTCGCCCTGCTAAGGTCACTGAGACCTTGCTCAA.......................................................................................GTACATCCCAATCCATGAAATTCCTATTCAATATGGTGGACTCAAGAGGGAGAATGACTTTGAGTTTTCAGCCTCCGACTGTGAAGCTTCGGAGATTCTCCTTAAAGCTGGATCAACTGAAACTATTGAAATACCTGCAGTAGAT.........................................................................................GTGGAAAGTACATTTATCTGGGATGTTACGATTGTGGGCGGAGAAGTGAGCTATAAAGAGGAATTTGTTCCAGAGGATGAGACTTCTTACACTATAATCATTCAGAAGGACAAGAAGGTGAGCTCGACAATTCGCAACACATTCAAGAACACTGAAGCAGGAAAGGTTGTGCTGACAATCAAGAACACTTCTAGCAAGAAGAAGAAGGCGTTTTATCGACACAAGATCACCAAATCAACAATTTGAGATGAGCAAGTTTCTATTTTGAGTGAAGATGGAGTTCTTTTTCTCTGTTTTTAAGAATATGTATAATGTAGTAACCTTTTTGTGGTGGTTCATATACTTGATTATTTTTGGTCCTACATTCATATTGTATATGCTGATTTATTCTTTTTTCTCCCTACAAGGAAGAATATGATCTCTCTATTTTTTACC......................................................................................................................................................................................AAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E458523" ref_strand="+" ref_description="SGN-E458523 [cPRO-6-C5]">
      <seq>aagccgttgatcttcttcaagataactatcctgaattcgtcgccaaaaatatattcatcaatgttccattttggtattacgccgtccattctctgctgtcgcctttcctaacgcaaagaaccaaaagcaaattcgtatttgttcgccctgctaaggtcactgagaccttgctcaagtacattccaatccatgaaatccctattcaatatggtggactcaagagggagaatgagtttgagttttcagtctccgactgtgaagctttggagaatctccnttaagctggatcnnactgaactattgaaatacctgcagtagatgtggaaagtacatttatctgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="-" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="83100" stop="81903"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82800" g_stop="82751" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="50" r_length="50" r_score="0.940"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82750" i_stop="82670" i_length="81">
            <donor d_prob="0.973" d_score="0.94"/>
            <acceptor a_prob="0.973" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82669" g_stop="82545" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="51" r_stop="175" r_length="125" r_score="0.968"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="82544" i_stop="82458" i_length="87">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="82457" g_stop="82313" g_length="145"/>
          <reference_exon_boundary r_type="cDNA" r_start="176" r_stop="320" r_length="145" r_score="0.917"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="82312" i_stop="82224" i_length="89">
            <donor d_prob="0.947" d_score="0.82"/>
            <acceptor a_prob="0.996" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="82223" g_stop="82203" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="321" r_stop="341" r_length="21" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="-" ref_id="SGN-E458523" ref_strand="+">
        <total_alignment_score>0.941</total_alignment_score>
        <cumulative_length_of_scored_exons>341</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E458523" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82800" e_stop="82751"/>
          <exon e_start="82669" e_stop="82545"/>
          <exon e_start="82457" e_stop="82313"/>
          <exon e_start="82223" e_stop="82203"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGCCGTTGATCTTCTTCAGGATAACTATCCTGAATTTGTTGCCAAAAATGTGAGTCTTATTAGCATAGCTGTGATTTGTGAGTTATATCTTACTTGAATTATCTGACCATTTCACCTGTTTGTTTTTCAGATATTCATCAATGTTCCATTTTGGTATTACGCCGTGCACTCTCTGCTGTCGCCTTTCCTAACACAAAGAACCAAAAGCAAATTCGTATTTGCTCGCCCTGCTAAGGTCACTGAGACCTTGCTCAAGTAAGTTTCAAACATAAATCCAGTATTTGTCTGTTTAACTTTACTGTCTAATGTGGTCTAAATGTTGAACTATTTGGCTTGAGTTAGGTACATTCCAATCCATGAAATCCCTATTCAATATGGTGGACTCAAGAGGGAGAATGACTTTGAGTTTTCAGCCTCCGACTGTGAAGCTTCGGAGATTCTCCTTAAAGCTGGATCAATTGAAACTATTGAAATACCTGCAGTAGATGTAAGTATTAACTAACTTTGGATATATTGAGAGAGCTTTGATATTACGCGGAGATTTTGAATGTTTTGTGTTAAACTTTATTATGTCAGGTGGAAAGTACATTTATCTGG</genome_strand>
        <mrna_strand>AAGCCGTTGATCTTCTTCAAGATAACTATCCTGAATTCGTCGCCAAAAAT.................................................................................ATATTCATCAATGTTCCATTTTGGTATTACGCCGTCCATTCTCTGCTGTCGCCTTTCCTAACGCAAAGAACCAAAAGCAAATTCGTATTTGTTCGCCCTGCTAAGGTCACTGAGACCTTGCTCAA.......................................................................................GTACATTCCAATCCATGAAATCCCTATTCAATATGGTGGACTCAAGAGGGAGAATGAGTTTGAGTTTTCAGTCTCCGACTGTGAAGCTTTGGAGAATCTCCNTTAAGCTGGATCNNACTGAACTATTGAAATACCTGCAGTAGAT.........................................................................................GTGGAAAGTACATTTATCTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E443076" ref_strand="+" ref_description="SGN-E443076 [cSTA-36-M9]">
      <seq>gtttcctgaggaagagggaaagaatgaggaaaatcgcgatacggtagaggggaaagaagagaaggagggtgatttggatgttgttgaagtggatagagagatttccatttggggtgtaccccttttgcctagcaaaggggatgagaaaaccaatgtagttctattgaaattcttgagagcaagggattacaaagtgaatgaatctttcgaaatgcttaagaaaacactccaatggaggaaggattttaacatccaatctatcttggaggaagatttgggctcagatcttgctccagctgcttacatgagtggggttgataaccaaggacaccctatttgttacaacatttttggggttttggatgatgaagagatttataacaagacgttcgggacagaggagaaacggaaccagttcttgaggtggagagttcagttaatggagaagggcattcagcagcttgatttcaaggctggaggtgttagttcactgcttcagataaatgatctgaagaactcccctggaccgtctaagaaagaagtccgggttgctacccaacaagccgttgatcttcttcaagataactatcctgaatttgttgccaaaaatatattcatcaatgttccattttggtattatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="-" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="83654" stop="82339"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83302" g_stop="82751" g_length="552"/>
          <reference_exon_boundary r_type="cDNA" r_start="59" r_stop="610" r_length="552" r_score="0.966"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82750" i_stop="82670" i_length="81">
            <donor d_prob="0.973" d_score="0.98"/>
            <acceptor a_prob="0.973" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82669" g_stop="82639" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="611" r_stop="641" r_length="31" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="-" ref_id="SGN-E443076" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>583</cumulative_length_of_scored_exons>
        <coverage percentage="0.910" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E443076" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83302" e_stop="82751"/>
          <exon e_start="82669" e_stop="82639"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGAAGGAGGGTGATTTGGATGTTGTTGAAGTGGATAGAGAGATTTCTATTTGGGGTGTACCCATTTTGCCTAGCAAAGGGGATGAGAAAACCAATGTGGTTCTATTGAAATTCTTGAGAGCAAGGGATTACAAAGTGAATGAATCTTTCGAAATGCTCAAGAAAACACTCCAGTGGAGGAAGGATTTTAATATCCAATCCATCTTGGAGGAAGATTTGGGCTCAGATCTTGCACCAGCTGCTTACATGAGTGGGGTTGATAACCAAGGACACCCTATTTGTTACAACATTTTCGGCGTTTTGGAAGATGAAGAGATTTATAACAAAACGTTCGGGACAGAGGAGAAACGGAATCAGTTCTTGAGGTGGAGAGTTCAGTTAATGGAGAAGGGCATTCAGCAGCTTGATTTCAAAGCTGGAGGTGTTAGTTCACTGCTTCAGATAAATGATCTGAAGAACTCGCCTGGACCGTCTAAGAAAGAAGTCAGGGTTGCAACCAAACAAGCCGTTGATCTTCTTCAGGATAACTATCCTGAATTTGTTGCCAAAAATGTGAGTCTTATTAGCATAGCTGTGATTTGTGAGTTATATCTTACTTGAATTATCTGACCATTTCACCTGTTTGTTTTTCAGATATTCATCAATGTTCCATTTTGGTATTACG</genome_strand>
        <mrna_strand>GAGAAGGAGGGTGATTTGGATGTTGTTGAAGTGGATAGAGAGATTTCCATTTGGGGTGTACCCCTTTTGCCTAGCAAAGGGGATGAGAAAACCAATGTAGTTCTATTGAAATTCTTGAGAGCAAGGGATTACAAAGTGAATGAATCTTTCGAAATGCTTAAGAAAACACTCCAATGGAGGAAGGATTTTAACATCCAATCTATCTTGGAGGAAGATTTGGGCTCAGATCTTGCTCCAGCTGCTTACATGAGTGGGGTTGATAACCAAGGACACCCTATTTGTTACAACATTTTTGGGGTTTTGGATGATGAAGAGATTTATAACAAGACGTTCGGGACAGAGGAGAAACGGAACCAGTTCTTGAGGTGGAGAGTTCAGTTAATGGAGAAGGGCATTCAGCAGCTTGATTTCAAGGCTGGAGGTGTTAGTTCACTGCTTCAGATAAATGATCTGAAGAACTCCCCTGGACCGTCTAAGAAAGAAGTCCGGGTTGCTACCCAACAAGCCGTTGATCTTCTTCAAGATAACTATCCTGAATTTGTTGCCAAAAAT.................................................................................ATATTCATCAATGTTCCATTTTGGTATTATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E456619" ref_strand="+" ref_description="SGN-E456619 [cSTS-30-E15]">
      <seq>ttcttggaaacactctcttcaaaaaagaagagaccaacaagtctcctgaggaagagggaaagaatgaggaaaatcgtgatacggtagaggggaaagaagaggagaaggagggtgatttggatgttgttgaagtggatagagagatttctatttggggtgtaccccttttgcctagcaaaggggatgagaaaaccaatgtggttctattgaaattcttgagagcaagggattacaaagtgaatgaatctttcgaaatgctcaagaaaacactccaatggaggaaggattttaacatccaatcaatcttggaggaagatttgggctcagatcttgctccagctgcttacatgagtggggttgataaccaaggacaccctatttgttacaacatttttggggttttggatgatgaagagatttataacaaaacttttgggacggaggagaaacggaaccagttcttgaggtggagagttcagttaatggagaagggcattcagcagcttgatttcaggctggaggtgttagttcactgcttcagataaatgatctgaagaactcccctggaccgtctaagaaagaagtccgggttgctaccaaacaagccgttgatcttcttcaagataactatcctgaattcgtcgccaaaaatatattcatcaatgttccatttttggtatta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="-" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="83694" stop="82341"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83394" g_stop="82751" g_length="644"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="652" r_length="652" r_score="0.925"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82750" i_stop="82670" i_length="81">
            <donor d_prob="0.973" d_score="0.94"/>
            <acceptor a_prob="0.973" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82669" g_stop="82641" g_length="29"/>
          <reference_exon_boundary r_type="cDNA" r_start="653" r_stop="682" r_length="30" r_score="0.931"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="-" ref_id="SGN-E456619" ref_strand="+">
        <total_alignment_score>0.925</total_alignment_score>
        <cumulative_length_of_scored_exons>673</cumulative_length_of_scored_exons>
        <coverage percentage="0.987" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E456619" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83394" e_stop="82751"/>
          <exon e_start="82669" e_stop="82641"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTTGGGAACACTCTATTCAAAAAAGAAGAGACCAACAAGTCTCTAGAGGAAGAGGGAAAGAATGAGGAAAATCCCGAT---G-CGA----ATATA-GAGGAGAAGGAGGGTGATTTGGATGTTGTTGAAGTGGATAGAGAGATTTCTATTTGGGGTGTACCCATTTTGCCTAGCAAAGGGGATGAGAAAACCAATGTGGTTCTATTGAAATTCTTGAGAGCAAGGGATTACAAAGTGAATGAATCTTTCGAAATGCTCAAGAAAACACTCCAGTGGAGGAAGGATTTTAATATCCAATCCATCTTGGAGGAAGATTTGGGCTCAGATCTTGCACCAGCTGCTTACATGAGTGGGGTTGATAACCAAGGACACCCTATTTGTTACAACATTTTCGGCGTTTTGGAAGATGAAGAGATTTATAACAAAACGTTCGGGACAGAGGAGAAACGGAATCAGTTCTTGAGGTGGAGAGTTCAGTTAATGGAGAAGGGCATTCAGCAGCTTGATTTCAAAGCTGGAGGTGTTAGTTCACTGCTTCAGATAAATGATCTGAAGAACTCGCCTGGACCGTCTAAGAAAGAAGTCAGGGTTGCAACCAAACAAGCCGTTGATCTTCTTCAGGATAACTATCCTGAATTTGTTGCCAAAAATGTGAGTCTTATTAGCATAGCTGTGATTTGTGAGTTATATCTTACTTGAATTATCTGACCATTTCACCTGTTTGTTTTTCAGATATTCATCAATGTTCCA-TTTTGGTATTA</genome_strand>
        <mrna_strand>TTCTTGGAAACACTCTCTTCAAAAAAGAAGAGACCAACAAGTCTCCTGAGGAAGAGGGAAAGAATGAGGAAAATCGTGATACGGTAGAGGGGAAAGAAGAGGAGAAGGAGGGTGATTTGGATGTTGTTGAAGTGGATAGAGAGATTTCTATTTGGGGTGTACCCCTTTTGCCTAGCAAAGGGGATGAGAAAACCAATGTGGTTCTATTGAAATTCTTGAGAGCAAGGGATTACAAAGTGAATGAATCTTTCGAAATGCTCAAGAAAACACTCCAATGGAGGAAGGATTTTAACATCCAATCAATCTTGGAGGAAGATTTGGGCTCAGATCTTGCTCCAGCTGCTTACATGAGTGGGGTTGATAACCAAGGACACCCTATTTGTTACAACATTTTTGGGGTTTTGGATGATGAAGAGATTTATAACAAAACTTTTGGGACGGAGGAGAAACGGAACCAGTTCTTGAGGTGGAGAGTTCAGTTAATGGAGAAGGGCATTCAGCAGCTTGATTTC-AGGCTGGAGGTGTTAGTTCACTGCTTCAGATAAATGATCTGAAGAACTCCCCTGGACCGTCTAAGAAAGAAGTCCGGGTTGCTACCAAACAAGCCGTTGATCTTCTTCAAGATAACTATCCTGAATTCGTCGCCAAAAAT.................................................................................ATATTCATCAATGTTCCATTTTTGGTATTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E314318" ref_strand="+" ref_description="SGN-E314318 [cTOA-21-O6]">
      <seq>tttcacacaagcaaagcaacctcattcaactccaaaagctgtttaggggaggaggtgatttctaagatccaacacttgtgtaattgtgttatttatctaaaaacatgactgttgaggtgcaatgtgaggcaactcaagtggctgaagtagttgttccacaagaggaattagtggctgctaacaaggttgtagaggaggttgaggtgaatgagaaggtaaaagaagatgaagaagaggaatccaagcctaatacaattgagaaaagctcttcttatagagaagagagcaacttcctctctgatctcaaagagaatgagaagaaggcattgaatgagttgaaatctatagttgaggaggccattgttgggaacactctattcaaaaaagaagagaccaacaagtctctagaggaagagggaaagaatgaggaaaatcccgatgcgaatatagaggagaaggagggtgatttggatgttgttgaagtggatagagagatttctatttggggtgtacccattttgcctagcaaaggggatgagaaaaccaatgtggttctattgaaattcttgagagcaagggattacaaagtgaatgaaatcttcgaaatgctca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="-" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="84556" stop="82843"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84256" g_stop="84219" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="38" r_length="38" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="84218" i_stop="83717" i_length="502">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.932" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="83716" g_stop="83143" g_length="574"/>
          <reference_exon_boundary r_type="cDNA" r_start="39" r_stop="612" r_length="574" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="-" ref_id="SGN-E314318" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>612</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E314318" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84256" e_stop="84219"/>
          <exon e_start="83716" e_stop="83143"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCACACAAGCAAAGCAACCTCATTCAACTCCAAAAGGTGATTTTCTAATAACTCTTCCTTTTTTTTTTTTTTTTGAATATTTTATGTATACTATAGATGTTTTAGTTGATTGTGTTGTTGTTTCAGAGGTTTTAGTTTATTAAGGTTTATGGGAAACAATAAACAATATCTTTTAGGATTATACCGAGTATGCCGTTGTTGTTTGTAGAGATTTTTAGATTGACTAGATTCAGCTACATTGTCATTGAAAATCCATTATCTATATATCATCTTGAACAGAAAAGGTTGATTTTTCAGGGTTCTTAAGGGGAGAGTATTTCTTTTTCCACATTTTTAGATCTGTTGGATTGATTTTTGGTTTATTTTTATCATTTAGTGCTTGTAAGCTTTATTTTGAATTGAACCAAACACTTTAGTAAGCCAATTCAAAAAAGGCTCTAGTTTAACTTCATTGTTAATTTGAATTAAATCATGTTCTCTTTTGGCTATTTAGGGCACTGATTCAGGGACTCAAAATTTTGTTTTACTTGATTTTCAGCTGTTTAGGGGAGGAGGTGATTTCTAAGATCCAACACTTGTGTAATTGTGTTATTTATCTAAAAACATGACTGTTGAGGTGCAATGTGAGGCAACTCAAGTGGCTGAAGTAGTTGTTCCACAAGAGGAATTAGTGGCTGCTAACAAGGTTGTGGAGGAGGTTGAGGTGAATGAGAAGGTAAAAGAAGATGAAGAAGAGGAATCCAAGCCTAATACAATTGAGAAAAGCTCTTCTTATAGAGAAGAGAGCAACTTCCTCTCTGATCTCAAAGAGAATGAGAAGAAGGCATTGAATGAGTTGAAATCTATAGTTGAGGAGGCCATTGTTGGGAACACTCTATTCAAAAAAGAAGAGACCAACAAGTCTCTAGAGGAAGAGGGAAAGAATGAGGAAAATCCCGATGCGAATATAGAGGAGAAGGAGGGTGATTTGGATGTTGTTGAAGTGGATAGAGAGATTTCTATTTGGGGTGTACCCATTTTGCCTAGCAAAGGGGATGAGAAAACCAATGTGGTTCTATTGAAATTCTTGAGAGCAAGGGATTACAAAGTGAATGAATCTTTCGAAATGCTCA</genome_strand>
        <mrna_strand>TTTCACACAAGCAAAGCAACCTCATTCAACTCCAAAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTTTAGGGGAGGAGGTGATTTCTAAGATCCAACACTTGTGTAATTGTGTTATTTATCTAAAAACATGACTGTTGAGGTGCAATGTGAGGCAACTCAAGTGGCTGAAGTAGTTGTTCCACAAGAGGAATTAGTGGCTGCTAACAAGGTTGTAGAGGAGGTTGAGGTGAATGAGAAGGTAAAAGAAGATGAAGAAGAGGAATCCAAGCCTAATACAATTGAGAAAAGCTCTTCTTATAGAGAAGAGAGCAACTTCCTCTCTGATCTCAAAGAGAATGAGAAGAAGGCATTGAATGAGTTGAAATCTATAGTTGAGGAGGCCATTGTTGGGAACACTCTATTCAAAAAAGAAGAGACCAACAAGTCTCTAGAGGAAGAGGGAAAGAATGAGGAAAATCCCGATGCGAATATAGAGGAGAAGGAGGGTGATTTGGATGTTGTTGAAGTGGATAGAGAGATTTCTATTTGGGGTGTACCCATTTTGCCTAGCAAAGGGGATGAGAAAACCAATGTGGTTCTATTGAAATTCTTGAGAGCAAGGGATTACAAAGTGAATGAAATCTTCGAAATGCTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E309464" ref_strand="+" ref_description="SGN-E309464 [cTOA-2-C24]">
      <seq>acaagcaaagcatcctcattcaactccaaaagctgtttaggggaggaggtgatttctaagatccaacacttgtgtaattgtgttatttatctaaaaacatgactgttgaggtgcaatgtgaggcaactcaagtggctgaagtagttgttccacaagaggaattagtggctgctaacaaggttgtagaggaggttgaggtgaatgagaaggtaaaagaagatgaagaataggaatccaagcctaatacaattgagaaaagctcttcttatagagaagagagcaacttcctctctgatctcaaagagaatgagaagaaggcattgaatgagttgaaatctatagttgaagaggccattgttgggaacactctattcaaaaaagaagagaccaacaagtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="-" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="84550" stop="83052"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84250" g_stop="84219" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="32" r_length="32" r_score="0.969"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="84218" i_stop="83717" i_length="502">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.932" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="83716" g_stop="83352" g_length="365"/>
          <reference_exon_boundary r_type="cDNA" r_start="33" r_stop="397" r_length="365" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="-" ref_id="SGN-E309464" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>397</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E309464" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84250" e_stop="84219"/>
          <exon e_start="83716" e_stop="83352"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAAGCAAAGCAACCTCATTCAACTCCAAAAGGTGATTTTCTAATAACTCTTCCTTTTTTTTTTTTTTTTGAATATTTTATGTATACTATAGATGTTTTAGTTGATTGTGTTGTTGTTTCAGAGGTTTTAGTTTATTAAGGTTTATGGGAAACAATAAACAATATCTTTTAGGATTATACCGAGTATGCCGTTGTTGTTTGTAGAGATTTTTAGATTGACTAGATTCAGCTACATTGTCATTGAAAATCCATTATCTATATATCATCTTGAACAGAAAAGGTTGATTTTTCAGGGTTCTTAAGGGGAGAGTATTTCTTTTTCCACATTTTTAGATCTGTTGGATTGATTTTTGGTTTATTTTTATCATTTAGTGCTTGTAAGCTTTATTTTGAATTGAACCAAACACTTTAGTAAGCCAATTCAAAAAAGGCTCTAGTTTAACTTCATTGTTAATTTGAATTAAATCATGTTCTCTTTTGGCTATTTAGGGCACTGATTCAGGGACTCAAAATTTTGTTTTACTTGATTTTCAGCTGTTTAGGGGAGGAGGTGATTTCTAAGATCCAACACTTGTGTAATTGTGTTATTTATCTAAAAACATGACTGTTGAGGTGCAATGTGAGGCAACTCAAGTGGCTGAAGTAGTTGTTCCACAAGAGGAATTAGTGGCTGCTAACAAGGTTGTGGAGGAGGTTGAGGTGAATGAGAAGGTAAAAGAAGATGAAGAAGAGGAATCCAAGCCTAATACAATTGAGAAAAGCTCTTCTTATAGAGAAGAGAGCAACTTCCTCTCTGATCTCAAAGAGAATGAGAAGAAGGCATTGAATGAGTTGAAATCTATAGTTGAGGAGGCCATTGTTGGGAACACTCTATTCAAAAAAGAAGAGACCAACAAGTC</genome_strand>
        <mrna_strand>ACAAGCAAAGCATCCTCATTCAACTCCAAAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTTTAGGGGAGGAGGTGATTTCTAAGATCCAACACTTGTGTAATTGTGTTATTTATCTAAAAACATGACTGTTGAGGTGCAATGTGAGGCAACTCAAGTGGCTGAAGTAGTTGTTCCACAAGAGGAATTAGTGGCTGCTAACAAGGTTGTAGAGGAGGTTGAGGTGAATGAGAAGGTAAAAGAAGATGAAGAATAGGAATCCAAGCCTAATACAATTGAGAAAAGCTCTTCTTATAGAGAAGAGAGCAACTTCCTCTCTGATCTCAAAGAGAATGAGAAGAAGGCATTGAATGAGTTGAAATCTATAGTTGAAGAGGCCATTGTTGGGAACACTCTATTCAAAAAAGAAGAGACCAACAAGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E300745" ref_strand="+" ref_description="SGN-E300745 [cLEW-8-H4]">
      <seq>acaagcaaagcaacctcattcaactccaaaagctgtttaggggaggaggtgatttctaagatccaacacttgtgtaattgtgttatttatctaaaaacatgactgttgaggtgcaatgtgaggcaactcaagtggctgaagtagttgttccacaagaggaattagtggctgctaacaaggttgtagaggaggttgaggtgaatgacaaggtaaaagaagatgaagaagaggaatccaagcctaatacaattgagaaaagctcttcttatagagaagagagcaacttcctctctgatctcaaagagaatgagaagaaggcatcgaatgagttgaaatctatagttgaggaggccattgatgggaacactcta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="-" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="84550" stop="83078"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84250" g_stop="84219" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="32" r_length="32" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="84218" i_stop="83717" i_length="502">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.932" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="83716" g_stop="83378" g_length="339"/>
          <reference_exon_boundary r_type="cDNA" r_start="33" r_stop="371" r_length="339" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="-" ref_id="SGN-E300745" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>371</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E300745" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84250" e_stop="84219"/>
          <exon e_start="83716" e_stop="83378"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAAGCAAAGCAACCTCATTCAACTCCAAAAGGTGATTTTCTAATAACTCTTCCTTTTTTTTTTTTTTTTGAATATTTTATGTATACTATAGATGTTTTAGTTGATTGTGTTGTTGTTTCAGAGGTTTTAGTTTATTAAGGTTTATGGGAAACAATAAACAATATCTTTTAGGATTATACCGAGTATGCCGTTGTTGTTTGTAGAGATTTTTAGATTGACTAGATTCAGCTACATTGTCATTGAAAATCCATTATCTATATATCATCTTGAACAGAAAAGGTTGATTTTTCAGGGTTCTTAAGGGGAGAGTATTTCTTTTTCCACATTTTTAGATCTGTTGGATTGATTTTTGGTTTATTTTTATCATTTAGTGCTTGTAAGCTTTATTTTGAATTGAACCAAACACTTTAGTAAGCCAATTCAAAAAAGGCTCTAGTTTAACTTCATTGTTAATTTGAATTAAATCATGTTCTCTTTTGGCTATTTAGGGCACTGATTCAGGGACTCAAAATTTTGTTTTACTTGATTTTCAGCTGTTTAGGGGAGGAGGTGATTTCTAAGATCCAACACTTGTGTAATTGTGTTATTTATCTAAAAACATGACTGTTGAGGTGCAATGTGAGGCAACTCAAGTGGCTGAAGTAGTTGTTCCACAAGAGGAATTAGTGGCTGCTAACAAGGTTGTGGAGGAGGTTGAGGTGAATGAGAAGGTAAAAGAAGATGAAGAAGAGGAATCCAAGCCTAATACAATTGAGAAAAGCTCTTCTTATAGAGAAGAGAGCAACTTCCTCTCTGATCTCAAAGAGAATGAGAAGAAGGCATTGAATGAGTTGAAATCTATAGTTGAGGAGGCCATTGTTGGGAACACTCTA</genome_strand>
        <mrna_strand>ACAAGCAAAGCAACCTCATTCAACTCCAAAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTTTAGGGGAGGAGGTGATTTCTAAGATCCAACACTTGTGTAATTGTGTTATTTATCTAAAAACATGACTGTTGAGGTGCAATGTGAGGCAACTCAAGTGGCTGAAGTAGTTGTTCCACAAGAGGAATTAGTGGCTGCTAACAAGGTTGTAGAGGAGGTTGAGGTGAATGACAAGGTAAAAGAAGATGAAGAAGAGGAATCCAAGCCTAATACAATTGAGAAAAGCTCTTCTTATAGAGAAGAGAGCAACTTCCTCTCTGATCTCAAAGAGAATGAGAAGAAGGCATCGAATGAGTTGAAATCTATAGTTGAGGAGGCCATTGATGGGAACACTCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E379132" ref_strand="+" ref_description="SGN-E379132 [TUS-3-P18]">
      <seq>aatatgacaaggttcataagtctcactaacttggaaagcaagtaaaactcaagaaacatggagatcatgatcatcattgccttcacttatagacggaatggtatgctcatcggctgcaagtataggactcttgagaaaaggttttggcaggagaagggtgctgataaggtactatatggactggatgatgtaagagaagcagatgagatcatcattgtagaaggtgaaatagataagctttcagtggaagaagctggatttcctaactgtgtcagtgttcctaatggtgcaccacagggcatcgcatccaaagaactgctaccactggaagagacaggataccagattttcatacctgtggaactgcaatgagtgcttggagaaggcgtcccggattgtgctggcaactgatggtgatttaccaggccaagcattggctgaagagcttgcccgccgtctggggaaagaaaggtgttggcaagtatgttggccgaaaaagaatgagttaagcagttataaagatgcaaatgaggtacttgtaaatcttggaagagaagctctgaaagaagcgattgaatgtgccgtgccatatgaaatgcagaatttgaactaatccnacaagtttttagtcttaagagatatctttccnacattacttgaccctctccacgagactttatgcatctgtgacaggttggtagatgaaaggtttcattgtttacttggaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="-" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="92763" stop="85855"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92463" g_stop="92395" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="69" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92394" i_stop="92281" i_length="114">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92280" g_stop="92200" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="70" r_stop="150" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="92199" i_stop="90224" i_length="1976">
            <donor d_prob="0.920" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="90223" g_stop="90158" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="151" r_stop="216" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="90157" i_stop="90079" i_length="79">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="90078" g_stop="89962" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="217" r_stop="333" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="89961" i_stop="89849" i_length="113">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.010" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="89848" g_stop="89797" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="334" r_stop="385" r_length="52" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="89796" i_stop="89696" i_length="101">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="89695" g_stop="89610" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="386" r_stop="471" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="89609" i_stop="87863" i_length="1747">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="87862" g_stop="87802" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="472" r_stop="532" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="87801" i_stop="86591" i_length="1211">
            <donor d_prob="0.967" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="86590" g_stop="86485" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="533" r_stop="638" r_length="106" r_score="0.953"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="86484" i_stop="86375" i_length="110">
            <donor d_prob="0.987" d_score="0.94"/>
            <acceptor a_prob="0.580" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="86374" g_stop="86327" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="639" r_stop="686" r_length="48" r_score="0.958"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="86326" i_stop="86197" i_length="130">
            <donor d_prob="0.963" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="0.95"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="86196" g_stop="86155" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="687" r_stop="728" r_length="42" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="-" ref_id="SGN-E379132" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>728</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E379132" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92463" e_stop="92395"/>
          <exon e_start="92280" e_stop="92200"/>
          <exon e_start="90223" e_stop="90158"/>
          <exon e_start="90078" e_stop="89962"/>
          <exon e_start="89848" e_stop="89797"/>
          <exon e_start="89695" e_stop="89610"/>
          <exon e_start="87862" e_stop="87802"/>
          <exon e_start="86590" e_stop="86485"/>
          <exon e_start="86374" e_stop="86327"/>
          <exon e_start="86196" e_stop="86155"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATATGACAAGGTTCATAAGTCTCACTAACTTGGAAAGCAAGTAAAACTCAAGAAACATGGAGATCATGGTAGATAATCTTATCATTAACCTCATTTTGAAACTGGAAAGTAATATTTTATGGCTGCATCATGGGTAGAGTCGTAGAGATATAAATTACATGCCAATATTTGGGTGCTTGCAGATCATCATTGCCTTCACTTATAGACGGAATGGTATGCTCATCGGCTGCAAGTATAGGACTCTTGAGAAAAGGTTTTGGCAGGTAAATTTGTTCTTTAAGTTACAACCCTAACTGCATGCATGGAGTAATGGGGAAGTACGTGAAAACACAATATGCCATTACTGCTTAACTATATGCAATGCATGCTTCCAATTCTTAAGCTAAAGTTAGTCTTGCAAAAGTTTCTCGATGAGCAAATTCTTTAGCTTCAAATTCCTTTTAATAAAAAAGATATTGTGTCCTTGGCTGAAATTAATAGTTTAGTATTGTTGCTCCTAATAAGCACACACATGCAGTCGCGCAAGTAATATAGTTTATTAAGAAACGAGTTTTCGTTCCCATGGGACTTATGATCAACTTATATTTATTAACTTAATTCCACAATTCGACAAAAGTAACTTTTTAAAAGGGTGAATGTTGTTAATCACTACTACAACTAATGCAATAAATAAAATAACTAATGTGAACGACTTTAATTTGATGTTTTAAGCAAGTAAGAGACAATTCCAGGGCTGCAGCATGCATTGGATTTCATGTATCGTACCTCAGGTAGTGAACTAATTAGGTTATCAAGCTACTGATTTACATGGTTGATTTTATGATTATGGTCTTCCGACCTCTAATCGCCTACTTTAGCTGTCTAACTACATCGTTGAACGGAGATAGACAGTCCTAATTGGCGAGCATTTATTTTTCATCTTGTTTTATAACTAAGCTAGGTGTTCGTCCGAGCGTCACTCCTAAATACAAATCAATTCAACTTAATGGAAGATCAAACTTTCTATATTCTTTGGTCTATCTACCTTAGCCTCTCTCGATTTTAAGAGCAGACAAGAGATTTATCTCTATGATGGCCAATCAAGAAATACTAAAACAAGAATAAAAAGTAACTTAAAACGATAACGAAGAATTGATTCAAAAACCTTTAATACTCCACAATCATTCCGTAGCTACATCCCCTGAACAAGGGCGTTTAGCCACTCATAATGTTCAAAAACCGCAAAATAGAATTGTTTATGCGATTTCCAAAATAAAGAAGAGATAGAAAATCGAAACCTGTTAGAAAACTTGGATGTTGCTCTTGCACACCAAAAAGTAGTCGAACCCTAACAAATAGCCCTAGGGTCCTATTTATAGAAGTTAGGAAAAGTATTTTCTAAATCTAATCCGACAAGGAGTCCTATTCAAGTCAACTTTCGCTGGGCATGTCGAAAACGGGCTGGGGCACCGCGGCAGACAGTGCCTTCAGTCGTTCCAGCTGTGGCGCGCCGCGCCAAGTAGTGCGCCTGGAGTTGCTTCTGCAGTTCTAGCCTTGGCGCCTCGCGCCAGGCAGTGCGTCTGAGGAAGGTGTCGAGTGTTGGCCTTGGCGCTTTGCGACCAGGTAGTGCGCCTGAAAAGGTCGCCTGTGGTTCTGGCCTTGGCGCCTCGCACCAGGCAGTGCGCCACTCACTGCTGTTTCCTCCTTAGTTTATTTTAATGCTTCCTTGCTTCTCCTTCCCTCGAATAGACTCCATTTACCTTGAAAGTTCCTGCATCACCTAATCATGTGTTTTAGTGCACAATCATCGCAAGTTAAACAAAACAAAACTAATAGTCTCAAGATTATTCTTAAATTCACCCCAAAGTAGGCATTTATTGGCAAATTCGGCATATAAATATGCCTAAGATCAAGTATCTTACAACAAGAAGGGGATTGTTTGTCATGCTAATACATATGACACTTCACAATTATATTGTGGTAATATTTATCAAAATTTTTAAAAATTGGTTCCTACTTTATGGGTTTTGGGTTTGGGACTCTTTTGAATAACTTTAGCCTATCCTCTGGACAAATGTTTCTGAACAGTTTCTTTGTGATGTCAATTTAAGAGTTTTTTCAAGCTTCCAGTCAGTGTCTGCTGTTTTCACTGACATTGATTTTTCTGAAGGAAAATTTGATATAGTCTGAACAGAGAAGTTAGTATTTTTCCTTATTTTCCTCGTGCCTTTATTAATCAACTTCTACTTTCGATTGCCAGGAGAAGGGTGCTGATAAGGTACTATATGGACTGGATGATGTAAGAGAAGCAGATGAGATCATCATTGTAAGTTCCAAAACTTTTTCTTTCTCAGATATGTATTTCTGTCTGCTGATTAGATGTGATACTCTATTGCTGACCAAAGGTAGAAGGTGAAATAGATAAGCTTTCAGTGGAAGAAGCTGGATTTCCTAACTGTGTCAGTGTTCCTAATGGTGCACCACAGGGCATCGCATCCAAAGAACTGCTACCACTGGAAGAGGTGTGTCACAAGTATTTTGACATAATGTTACCATTGTGGTTTACCACTTATTTTAAAATTATTTGATATTTAGGATTATATTTCCAGCTTAATAGTTCTTCTTGCACCTGAAGACAGGATACCAGATTTTCATACCTGTGGAACTGCAATGAGTGCTTGGAGAAGGTTGGTCGTCTTGATGCATTAAACTGAGAACACTAAGCAAAAGATATGTTCCTAATGTCATTGCTCATTCCTTTTCTATTTTTTAATTTATATGTTTTCAGGCGTCCCGGATTGTGCTGGCAACTGATGGTGATTTACCAGGCCAAGCATTGGCTGAAGAGCTTGCCCGCCGTCTGGGGAAAGAAAGGTTTTTTCCTTCTTCTCTTGTATGTTTATTTTGTGTTCCTTTCTTCGATGTCCCAAAATGTTGTCTACTTAAGTGGATGATTTCTCCATGCACTTCTTTTCAAGTTGCTGAACATTGTATTCAAGAAGTGGAAACTGCAAGAATTCTTGCAATTTCAAATCAATTGTAAATAAGTTTTCATATACTTTGGACTAGTGCCGGCAAAATGAGCCCATATTTTGGTAACCCGCCCATATTTTAATGGGTTGGGTGAGTGATTTTTTACATGAGTAAAAAATGGGTTGATACCCTTATTCAACCCATAAAATATGGGTAAAATATAGATTAGCCAAATGGGTTAAGCTTCTAACTTTTATTCACTCAAATTGATGATATCACTAAAAATATTGGAACTTCTCTTCCTTTTTATGTTCTTCTACAGAACTAATTATTTTTCTCTATAATTGAAAAGATGAAGTTCTTTGACCCTCCAAAAATATACATTTTAATTGTATATTTCTTTTGCTAATTATAATTGTATTTTTTTAAAATTTTATATTGGATATTAAAATAGTGTAAAAATAAGCAAATCATGTATTAGTATTGACATTGCTTAAAGCGCATTAAGCATGTTCTTAAAATGCATATATGCATTTACTTTGAAATTAAAAATATTTTCCTCTTGTTATTACATAAATTTATTTTATATCGAAAAGTTATAGGAATTTTGTTTTTTACTTTTGTAAGAACATTTTAAAAATATTTTCTCCATGTTGTATTCTTATGTAGAGTACTATTTACTCATGCAATATGGGTAAACTAGTATTTTGCCCAACCCATTTATTACCCAATCAATTTTTACCCATATCAAATATGGATGGGTTGAATTATTATCATTTTCTGTTGACCATTTTCAACCCGCCCAAATTTTACCCCCCTCCCCACACACACACACACACACTTGCCACCACTACTTTGGACTAACTTATCTCCATTTCTCCAATGCCTAGAAACATTTTTCATAGTCATACTTAGAGAAAGACTAACCCAAAAAACTTCTTTTGGTGGTTTGCAATTGCATGCATCTTTCTGTCAATGCAGCTAAATTACGCAAGGCATGCCTATTTTGTAATAACCATTGTCATCATTAAAGTTCATGGTTACAAATTTTAGATGAGAACTAAAAAAAAAAAGAAACCACTTGCTTGATGTAGCCGCTAAGTTGCTCTTCAAATTAGTCAAATGGCAACATAAGTCCTTGAAAAATTTGGGTTCTATTGACTTTTCATAACCCCAAACTTTTATCTTTTCTGTATTCTCTTAATCTTGGCTCTAAGAGAGTTCAAGAGATATAGAGAGACTTATATATTGATGTAGCAAGTGGAATACTAAATAAGAAAGGGTATTGCACCTTTTGGGAGGTGGAGTCAAATTTGCGTCGGGTAAGAATGCAGAATAATGTACATCTAAATGAATATACTGGATTGTTGTACCTTTTTATCACTAGTTAAGTGTATTTTGTGTTTTTGACAGTTGTGAGAAGACATGCCTTTTTTCTTTCTGTGCATGAGAATCACAGCCTTTCAGCATGCTCGGACCTAATATAATTTTCTCTGTCTGTTCATTGGTATTTATCTCAGTGGCTGCAATACACAGATGCTTCTACTTGTAACTCTCATTTGTTCAATCCATCATGCAATCCAAAGCCTTATTACTTCACCAACGGGTCAGAAAGTATTACAATTGGTTGACTTTGCTTGATTTGCAGGTGTTGGCAAGTATGTTGGCCGAAAAAGAATGAGTTAAGCAGTTATAAAGATGCAAATGAGGTGAAAATCTTTTTATTTTCTTTTTCCTTTTAGGATGTTGCCGTCATATTTCTTTCTCTGTTATAACGATACATTTCTTGTGAGCAGTTTTCCTTCTTTCTTTCTTTACTTCTTTGTTTATAGAGGTGCTGCAGTAAATTTCAACTAGGGTCAAGAAGAATCAACTATGCGAAAGATTTGAACGTTTAGCTTATAATTATGATCTGTGGGTCGTGAGAACTACATTGTTAGAGATCACGGGATTGTGACTCATTTAATGTCAATCTACATGTTTTTCCATGAGTAAATAGTTTATTAGAATATCATTCCTAGGAACCAACCAATATACATCAATAATATACTGATGCATGATGTGCCTTTGCTGCTTAACCAACCACCATCCAGGTCAAACCATGGCTAATTTATCTCCTACCATTACTGTATCTATATTTGTGACCAAAGAAAGGTTTCTCATAAAGCTAAAGCTCAGAATTGATAGCATGCATGGTCATCAACTCAGGGCATGATCAGAGATTTAATTCTTTAGGTGATAGCTCAGGTATATAGGTTCGATTCCCATTACCAGTGGGCTAGTACTCAGGTTAGCCTTTTTTTGGTTTTAATCAAGAAGTTATCTGGCAGCCTTCTGAGTATTTGAGCATCAGAGTTAACTTTGACAACTAAAAGGAATTGAAAGGATATTAGAGGCGCTGATCATGTACTAAGAACATGCTTGCAGATCTTACTCATCTGGTAGATATATCAATGTATAGATAGAGATTAATCATTTTATAAGAAGAATTAAAAAAAAAAAAGCAGCAGGAAATGCAGTTGACATCCCCCTAAAACTATGTGGTCCTTTATTGTTCACTCTGTGGATGGCCTGCATTTGTCCAAGTCCAGTGTTTAGTTTATAAGGGATTTCATGTGCACCTTGGATATTCAATCAATGCTTCCGTTATTCAATCTGGTGCACATCAGGTAATTTTATGGCACTGTAATTAGAATGTTGGAGAAGTTCCCTGAAGTTTATATTACTGTATTTGTTACTATTATTTTTATGGGGTTTGCTTCTTTGTCCTGAATTGGTTTCTAAGTTTAGATATTGTTAAGGAACATGCTGTCAAATTTTTATTATGATGTTGGCAATCCACTGAAATCAAGACCTGTGCTATTCATTTGCTCATGCATATTGCAAATTAAATTTAAAGCCTTCTATAAAATTGTTGTAGGTACTTGTTAATCTGGGAAGAGAAGCTCTGAAAGAAGCGATTGAATGTGCCGTGCCATATGAAATGCAGAATTTGAACTAATCCACAAAGTTTTTAGTCTTAAGAGGTATGTGTTACAGATCCACAAAGTTTCCATTCTTTTTGCTCTTTACTTCTTTCCCCCCTTTGTTAAAAAAAATTCAAGATAACAACCAACTAAAGTTTTTTGATACACAGATATCTTTCCAACATTACTTGACCCTCTCCTCGAGACTTTATGCATCTGTAAGTAACATTACTCAAGATGAAAACGCGAAGCAATTTTTGTCAACACCTAGATTTTCCTTTTCAAAAGTTTCATATTCTCCTCTAGAAATCTTGGACTTGGATTTCTCAAAATAGTGTGCTTAAATAGGTGACAGGTTGGTTGATGAAATGTTTCATTGTTTACTTGGAA</genome_strand>
        <mrna_strand>AATATGACAAGGTTCATAAGTCTCACTAACTTGGAAAGCAAGTAAAACTCAAGAAACATGGAGATCATG..................................................................................................................ATCATCATTGCCTTCACTTATAGACGGAATGGTATGCTCATCGGCTGCAAGTATAGGACTCTTGAGAAAAGGTTTTGGCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAAGGGTGCTGATAAGGTACTATATGGACTGGATGATGTAAGAGAAGCAGATGAGATCATCATT...............................................................................GTAGAAGGTGAAATAGATAAGCTTTCAGTGGAAGAAGCTGGATTTCCTAACTGTGTCAGTGTTCCTAATGGTGCACCACAGGGCATCGCATCCAAAGAACTGCTACCACTGGAAGAG.................................................................................................................ACAGGATACCAGATTTTCATACCTGTGGAACTGCAATGAGTGCTTGGAGAAG.....................................................................................................GCGTCCCGGATTGTGCTGGCAACTGATGGTGATTTACCAGGCCAAGCATTGGCTGAAGAGCTTGCCCGCCGTCTGGGGAAAGAAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTGGCAAGTATGTTGGCCGAAAAAGAATGAGTTAAGCAGTTATAAAGATGCAAATGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTTGTAAATCTTGGAAGAGAAGCTCTGAAAGAAGCGATTGAATGTGCCGTGCCATATGAAATGCAGAATTTGAACTAATCCNACAAGTTTTTAGTCTTAAGAG..............................................................................................................ATATCTTTCCNACATTACTTGACCCTCTCCACGAGACTTTATGCATCT..................................................................................................................................GTGACAGGTTGGTAGATGAAAGGTTTCATTGTTTACTTGGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E418137" ref_strand="+" ref_description="SGN-E418137 [STM-26-P8]">
      <seq>catcaactcagggcatgatcagacatttaattctttaggtgatagctcaggtatataggttcaattcccattaccagtgggcagtgggctagtaatctggttagccgttttttggttttaatcaagaagtcatctggcagccttctgagtatttgagcatcagagttaactttgacaactaaaaggaattggaaggatattggaggcactgatcatgtactaagaacatgcttgcagatcttactcatctggtagatatatcaatgtacagatagagattaatttttttctaagaagaatttaaaaaaattaaaataagcagcaggaaatgcagttgacatcccccctaaaactatgtggtcctttattgttcactttgtggatgacctgcatttgtccaagtccagtgtttagtttataagggatttcatgtgcaccttggatattcaagcaatgcttcccttattcaatctggtgcacatcaagtaattatggcactggaattagaatggtggagaagttccctgaaggttatcattggatttggtactattattttta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="-" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="87613" stop="86487"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="87313" g_stop="86762" g_length="552"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="561" r_length="561" r_score="0.900"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="-" ref_id="SGN-E418137" ref_strand="+">
        <total_alignment_score>0.900</total_alignment_score>
        <cumulative_length_of_scored_exons>552</cumulative_length_of_scored_exons>
        <coverage percentage="0.984" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E418137" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="87313" e_stop="86762"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATCAACTCAGGGCATGATCAGAGATTTAATTCTTTAGGTGATAGCTCAGGTATATAGGTTCGATTCCCATTA-C------CAGTGGGCTAGTACTCAGGTTAGCCTTTTTTTGGTTTTAATCAAGAAGTTATCTGGCAGCCTTCTGAGTATTTGAGCATCAGAGTTAACTTTGACAACTAAAAGGAATTGAAAGGATATTAGAGGCGCTGATCATGTACTAAGAACATGCTTGCAGATCTTACTCATCTGGTAGATATATCAATGTATAGATAGAGATTAATCATTTTATAAGAAGAA-TT-AAAAAA--AAAA-AAGCAGCAGGAAATGCAGTTGACAT-CCCCCTAAAACTATGTGGTCCTTTATTGTTCACTCTGTGGATGGCCTGCATTTGTCCAAGTCCAGTGTTTAGTTTATAAGGGATTTCATGTGCACCTTGGATATTCAATCAATGCTTCCGTTATTCAATCTGGTGCACATCAGGTAATTTTATGGCACTGTAATTAGAATGTTGGAGAAGTTCCCTGAAGTTTATATTACTGTATTTGTTACTATTATTTTTA</genome_strand>
        <mrna_strand>CATCAACTCAGGGCATGATCAGACATTTAATTCTTTAGGTGATAGCTCAGGTATATAGGTTCAATTCCCATTACCAGTGGGCAGTGGGCTAGTAATCTGGTTAGCCGTTTTTTGGTTTTAATCAAGAAGTCATCTGGCAGCCTTCTGAGTATTTGAGCATCAGAGTTAACTTTGACAACTAAAAGGAATTGGAAGGATATTGGAGGCACTGATCATGTACTAAGAACATGCTTGCAGATCTTACTCATCTGGTAGATATATCAATGTACAGATAGAGATTAATTTTTTTCTAAGAAGAATTTAAAAAAATTAAAATAAGCAGCAGGAAATGCAGTTGACATCCCCCCTAAAACTATGTGGTCCTTTATTGTTCACTTTGTGGATGACCTGCATTTGTCCAAGTCCAGTGTTTAGTTTATAAGGGATTTCATGTGCACCTTGGATATTCAAGCAATGCTTCCCTTATTCAATCTGGTGCACATCAAGTAA--TTATGGCACTGGAATTAGAATGGTGGAGAAGTTCCCTGAAG-GT-TATCATTGGATTTGGTACTATTATTTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E209446" ref_strand="+" ref_description="SGN-E209446 [cLEC-53-J18]">
      <seq>aatatgacaaggttcataagtctcactaacttggaaagcaagtaaaactcaagaaacatggagatcatgatcatcattgccttcacttatagacggaatggtatgctcatcggctgcaagtataggactcttgagaaaaggttttggcaggagaagggtgctgataaggtactatatggactggatgatgtaagagaagcagatgagatcatcattgtagaaggtgaaatagataagctttcagtggaagaagctggatttcctaactgtgtcagtgttcctaatggtgcaccacagggcatcgcatccaaagaactgctaccactggaagagacaggataccagattttcatacctgtggaactgcaatgagtgcttggagaaggcgtcccggattgtgctggcaactgatggtgatttaccaggccaagcattggctgaagagcttgcccgccgtctggggaaagaaaggtgttggcaagtatgttggccgaaaaagaatgagttaagcagttataaagatgcaaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="-" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="92763" stop="87504"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92463" g_stop="92395" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="69" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92394" i_stop="92281" i_length="114">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92280" g_stop="92200" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="70" r_stop="150" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="92199" i_stop="90224" i_length="1976">
            <donor d_prob="0.920" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="90223" g_stop="90158" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="151" r_stop="216" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="90157" i_stop="90079" i_length="79">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="90078" g_stop="89962" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="217" r_stop="333" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="89961" i_stop="89849" i_length="113">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.010" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="89848" g_stop="89797" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="334" r_stop="385" r_length="52" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="89796" i_stop="89696" i_length="101">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="89695" g_stop="89610" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="386" r_stop="471" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="89609" i_stop="87863" i_length="1747">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="87862" g_stop="87804" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="472" r_stop="530" r_length="59" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="-" ref_id="SGN-E209446" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>530</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E209446" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92463" e_stop="92395"/>
          <exon e_start="92280" e_stop="92200"/>
          <exon e_start="90223" e_stop="90158"/>
          <exon e_start="90078" e_stop="89962"/>
          <exon e_start="89848" e_stop="89797"/>
          <exon e_start="89695" e_stop="89610"/>
          <exon e_start="87862" e_stop="87804"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATATGACAAGGTTCATAAGTCTCACTAACTTGGAAAGCAAGTAAAACTCAAGAAACATGGAGATCATGGTAGATAATCTTATCATTAACCTCATTTTGAAACTGGAAAGTAATATTTTATGGCTGCATCATGGGTAGAGTCGTAGAGATATAAATTACATGCCAATATTTGGGTGCTTGCAGATCATCATTGCCTTCACTTATAGACGGAATGGTATGCTCATCGGCTGCAAGTATAGGACTCTTGAGAAAAGGTTTTGGCAGGTAAATTTGTTCTTTAAGTTACAACCCTAACTGCATGCATGGAGTAATGGGGAAGTACGTGAAAACACAATATGCCATTACTGCTTAACTATATGCAATGCATGCTTCCAATTCTTAAGCTAAAGTTAGTCTTGCAAAAGTTTCTCGATGAGCAAATTCTTTAGCTTCAAATTCCTTTTAATAAAAAAGATATTGTGTCCTTGGCTGAAATTAATAGTTTAGTATTGTTGCTCCTAATAAGCACACACATGCAGTCGCGCAAGTAATATAGTTTATTAAGAAACGAGTTTTCGTTCCCATGGGACTTATGATCAACTTATATTTATTAACTTAATTCCACAATTCGACAAAAGTAACTTTTTAAAAGGGTGAATGTTGTTAATCACTACTACAACTAATGCAATAAATAAAATAACTAATGTGAACGACTTTAATTTGATGTTTTAAGCAAGTAAGAGACAATTCCAGGGCTGCAGCATGCATTGGATTTCATGTATCGTACCTCAGGTAGTGAACTAATTAGGTTATCAAGCTACTGATTTACATGGTTGATTTTATGATTATGGTCTTCCGACCTCTAATCGCCTACTTTAGCTGTCTAACTACATCGTTGAACGGAGATAGACAGTCCTAATTGGCGAGCATTTATTTTTCATCTTGTTTTATAACTAAGCTAGGTGTTCGTCCGAGCGTCACTCCTAAATACAAATCAATTCAACTTAATGGAAGATCAAACTTTCTATATTCTTTGGTCTATCTACCTTAGCCTCTCTCGATTTTAAGAGCAGACAAGAGATTTATCTCTATGATGGCCAATCAAGAAATACTAAAACAAGAATAAAAAGTAACTTAAAACGATAACGAAGAATTGATTCAAAAACCTTTAATACTCCACAATCATTCCGTAGCTACATCCCCTGAACAAGGGCGTTTAGCCACTCATAATGTTCAAAAACCGCAAAATAGAATTGTTTATGCGATTTCCAAAATAAAGAAGAGATAGAAAATCGAAACCTGTTAGAAAACTTGGATGTTGCTCTTGCACACCAAAAAGTAGTCGAACCCTAACAAATAGCCCTAGGGTCCTATTTATAGAAGTTAGGAAAAGTATTTTCTAAATCTAATCCGACAAGGAGTCCTATTCAAGTCAACTTTCGCTGGGCATGTCGAAAACGGGCTGGGGCACCGCGGCAGACAGTGCCTTCAGTCGTTCCAGCTGTGGCGCGCCGCGCCAAGTAGTGCGCCTGGAGTTGCTTCTGCAGTTCTAGCCTTGGCGCCTCGCGCCAGGCAGTGCGTCTGAGGAAGGTGTCGAGTGTTGGCCTTGGCGCTTTGCGACCAGGTAGTGCGCCTGAAAAGGTCGCCTGTGGTTCTGGCCTTGGCGCCTCGCACCAGGCAGTGCGCCACTCACTGCTGTTTCCTCCTTAGTTTATTTTAATGCTTCCTTGCTTCTCCTTCCCTCGAATAGACTCCATTTACCTTGAAAGTTCCTGCATCACCTAATCATGTGTTTTAGTGCACAATCATCGCAAGTTAAACAAAACAAAACTAATAGTCTCAAGATTATTCTTAAATTCACCCCAAAGTAGGCATTTATTGGCAAATTCGGCATATAAATATGCCTAAGATCAAGTATCTTACAACAAGAAGGGGATTGTTTGTCATGCTAATACATATGACACTTCACAATTATATTGTGGTAATATTTATCAAAATTTTTAAAAATTGGTTCCTACTTTATGGGTTTTGGGTTTGGGACTCTTTTGAATAACTTTAGCCTATCCTCTGGACAAATGTTTCTGAACAGTTTCTTTGTGATGTCAATTTAAGAGTTTTTTCAAGCTTCCAGTCAGTGTCTGCTGTTTTCACTGACATTGATTTTTCTGAAGGAAAATTTGATATAGTCTGAACAGAGAAGTTAGTATTTTTCCTTATTTTCCTCGTGCCTTTATTAATCAACTTCTACTTTCGATTGCCAGGAGAAGGGTGCTGATAAGGTACTATATGGACTGGATGATGTAAGAGAAGCAGATGAGATCATCATTGTAAGTTCCAAAACTTTTTCTTTCTCAGATATGTATTTCTGTCTGCTGATTAGATGTGATACTCTATTGCTGACCAAAGGTAGAAGGTGAAATAGATAAGCTTTCAGTGGAAGAAGCTGGATTTCCTAACTGTGTCAGTGTTCCTAATGGTGCACCACAGGGCATCGCATCCAAAGAACTGCTACCACTGGAAGAGGTGTGTCACAAGTATTTTGACATAATGTTACCATTGTGGTTTACCACTTATTTTAAAATTATTTGATATTTAGGATTATATTTCCAGCTTAATAGTTCTTCTTGCACCTGAAGACAGGATACCAGATTTTCATACCTGTGGAACTGCAATGAGTGCTTGGAGAAGGTTGGTCGTCTTGATGCATTAAACTGAGAACACTAAGCAAAAGATATGTTCCTAATGTCATTGCTCATTCCTTTTCTATTTTTTAATTTATATGTTTTCAGGCGTCCCGGATTGTGCTGGCAACTGATGGTGATTTACCAGGCCAAGCATTGGCTGAAGAGCTTGCCCGCCGTCTGGGGAAAGAAAGGTTTTTTCCTTCTTCTCTTGTATGTTTATTTTGTGTTCCTTTCTTCGATGTCCCAAAATGTTGTCTACTTAAGTGGATGATTTCTCCATGCACTTCTTTTCAAGTTGCTGAACATTGTATTCAAGAAGTGGAAACTGCAAGAATTCTTGCAATTTCAAATCAATTGTAAATAAGTTTTCATATACTTTGGACTAGTGCCGGCAAAATGAGCCCATATTTTGGTAACCCGCCCATATTTTAATGGGTTGGGTGAGTGATTTTTTACATGAGTAAAAAATGGGTTGATACCCTTATTCAACCCATAAAATATGGGTAAAATATAGATTAGCCAAATGGGTTAAGCTTCTAACTTTTATTCACTCAAATTGATGATATCACTAAAAATATTGGAACTTCTCTTCCTTTTTATGTTCTTCTACAGAACTAATTATTTTTCTCTATAATTGAAAAGATGAAGTTCTTTGACCCTCCAAAAATATACATTTTAATTGTATATTTCTTTTGCTAATTATAATTGTATTTTTTTAAAATTTTATATTGGATATTAAAATAGTGTAAAAATAAGCAAATCATGTATTAGTATTGACATTGCTTAAAGCGCATTAAGCATGTTCTTAAAATGCATATATGCATTTACTTTGAAATTAAAAATATTTTCCTCTTGTTATTACATAAATTTATTTTATATCGAAAAGTTATAGGAATTTTGTTTTTTACTTTTGTAAGAACATTTTAAAAATATTTTCTCCATGTTGTATTCTTATGTAGAGTACTATTTACTCATGCAATATGGGTAAACTAGTATTTTGCCCAACCCATTTATTACCCAATCAATTTTTACCCATATCAAATATGGATGGGTTGAATTATTATCATTTTCTGTTGACCATTTTCAACCCGCCCAAATTTTACCCCCCTCCCCACACACACACACACACACTTGCCACCACTACTTTGGACTAACTTATCTCCATTTCTCCAATGCCTAGAAACATTTTTCATAGTCATACTTAGAGAAAGACTAACCCAAAAAACTTCTTTTGGTGGTTTGCAATTGCATGCATCTTTCTGTCAATGCAGCTAAATTACGCAAGGCATGCCTATTTTGTAATAACCATTGTCATCATTAAAGTTCATGGTTACAAATTTTAGATGAGAACTAAAAAAAAAAAGAAACCACTTGCTTGATGTAGCCGCTAAGTTGCTCTTCAAATTAGTCAAATGGCAACATAAGTCCTTGAAAAATTTGGGTTCTATTGACTTTTCATAACCCCAAACTTTTATCTTTTCTGTATTCTCTTAATCTTGGCTCTAAGAGAGTTCAAGAGATATAGAGAGACTTATATATTGATGTAGCAAGTGGAATACTAAATAAGAAAGGGTATTGCACCTTTTGGGAGGTGGAGTCAAATTTGCGTCGGGTAAGAATGCAGAATAATGTACATCTAAATGAATATACTGGATTGTTGTACCTTTTTATCACTAGTTAAGTGTATTTTGTGTTTTTGACAGTTGTGAGAAGACATGCCTTTTTTCTTTCTGTGCATGAGAATCACAGCCTTTCAGCATGCTCGGACCTAATATAATTTTCTCTGTCTGTTCATTGGTATTTATCTCAGTGGCTGCAATACACAGATGCTTCTACTTGTAACTCTCATTTGTTCAATCCATCATGCAATCCAAAGCCTTATTACTTCACCAACGGGTCAGAAAGTATTACAATTGGTTGACTTTGCTTGATTTGCAGGTGTTGGCAAGTATGTTGGCCGAAAAAGAATGAGTTAAGCAGTTATAAAGATGCAAATG</genome_strand>
        <mrna_strand>AATATGACAAGGTTCATAAGTCTCACTAACTTGGAAAGCAAGTAAAACTCAAGAAACATGGAGATCATG..................................................................................................................ATCATCATTGCCTTCACTTATAGACGGAATGGTATGCTCATCGGCTGCAAGTATAGGACTCTTGAGAAAAGGTTTTGGCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAAGGGTGCTGATAAGGTACTATATGGACTGGATGATGTAAGAGAAGCAGATGAGATCATCATT...............................................................................GTAGAAGGTGAAATAGATAAGCTTTCAGTGGAAGAAGCTGGATTTCCTAACTGTGTCAGTGTTCCTAATGGTGCACCACAGGGCATCGCATCCAAAGAACTGCTACCACTGGAAGAG.................................................................................................................ACAGGATACCAGATTTTCATACCTGTGGAACTGCAATGAGTGCTTGGAGAAG.....................................................................................................GCGTCCCGGATTGTGCTGGCAACTGATGGTGATTTACCAGGCCAAGCATTGGCTGAAGAGCTTGCCCGCCGTCTGGGGAAAGAAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTGGCAAGTATGTTGGCCGAAAAAGAATGAGTTAAGCAGTTATAAAGATGCAAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E598745" ref_strand="+" ref_description="SGN-E598745 [51717]">
      <seq>ggcaactctcattagagctcctcctgttacactctacactttcatctcaagattttcgcctaacagtcatggttttcttactattactcctactaggctcttcataactgcagctagcttgaggagagacgaaaataaggaggtggatgattatgctgaactgaaggagaaagtggaaaatttgggtatatgctgcaattctgttactcctgaagaatacacaagattaatgtgtcccaagtgcaaaggtggtcggtcaatgggaaagtgtttatcatttcatatgtcctcgaaaaggaattctgcattatggaggtgtttcaatattgaatgtggatgggcaggccagatcccacacaacagtacggcatctgatggggtccatcaacttggcagaatgaattttcctcggatacttacagaggaaagcttgaagttagaaccattaggtgacatgatcatcattgccttcacttataggcggaatggtatgctcattggctgcaagtataggactcttgagaaaaggttttggcaggagaagggtgcagataaggtactatatggactggatgatgtaagagaagcagatgagatcatcattgtagaaggtgaaatagataagctttcagtggaagaagctggatttcctaactgtgttaggtgttcctaatggtgcaccacagggcatcgcatccaaagaactgctaccactggaaagaggataccagattttcataacctgtggaactgcaatgagtgcttgggagaaaggcggtccccggattgtgcttggcaaactgatggtgattttaccaggccaaggcattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="-" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="95897" stop="89490"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95597" g_stop="95485" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="113" r_length="113" r_score="0.947"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="95484" i_stop="95077" i_length="408">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.996" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="95076" g_stop="94949" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="114" r_stop="241" r_length="128" r_score="0.969"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="94948" i_stop="94367" i_length="582">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="94366" g_stop="94311" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="242" r_stop="297" r_length="56" r_score="0.946"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="94310" i_stop="94230" i_length="81">
            <donor d_prob="0.966" d_score="0.96"/>
            <acceptor a_prob="0.775" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="94229" g_stop="94178" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="298" r_stop="349" r_length="52" r_score="0.981"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="94177" i_stop="94087" i_length="91">
            <donor d_prob="0.932" d_score="0.98"/>
            <acceptor a_prob="0.996" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="94086" g_stop="93979" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="350" r_stop="457" r_length="108" r_score="0.944"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="93978" i_stop="92281" i_length="1698">
            <donor d_prob="0.945" d_score="0.96"/>
            <acceptor a_prob="0.986" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="92280" g_stop="92200" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="458" r_stop="538" r_length="81" r_score="0.975"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="92199" i_stop="90224" i_length="1976">
            <donor d_prob="0.920" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="90223" g_stop="90158" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="539" r_stop="604" r_length="66" r_score="0.985"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="90157" i_stop="90079" i_length="79">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="90078" g_stop="89962" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="605" r_stop="723" r_length="119" r_score="0.957"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="89961" i_stop="89845" i_length="117">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.069" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="89844" g_stop="89793" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="724" r_stop="777" r_length="54" r_score="0.865"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="89792" i_stop="89696" i_length="97">
            <donor d_prob="0.000" d_score="0.85"/>
            <acceptor a_prob="1.000" a_score="0.76"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="89695" g_stop="89645" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="778" r_stop="831" r_length="54" r_score="0.784"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="-" ref_id="SGN-E598745" ref_strand="+">
        <total_alignment_score>0.944</total_alignment_score>
        <cumulative_length_of_scored_exons>824</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E598745" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="95597" e_stop="95485"/>
          <exon e_start="95076" e_stop="94949"/>
          <exon e_start="94366" e_stop="94311"/>
          <exon e_start="94229" e_stop="94178"/>
          <exon e_start="94086" e_stop="93979"/>
          <exon e_start="92280" e_stop="92200"/>
          <exon e_start="90223" e_stop="90158"/>
          <exon e_start="90078" e_stop="89962"/>
          <exon e_start="89844" e_stop="89793"/>
          <exon e_start="89695" e_stop="89645"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCAACTCTCTTTAGAGCTCGTCCTGTTATACTCTACACTTTCATCTCAAGATTTTCGCCTAACAGTCATGGTTTTCTTACTATTACTCCTACTAGGCTCTTCACACCTGCAGGTTCGCTTCAATTCCTTTTTTTTTGTCTGAATTTTTCTTTACCTAATATATATTGTAATTATGAAGAGGAAAAGGCAAGACGGCGAATCAAATTTTAATAAAAAAGTAACCTGTTTCTTCTGGTGGGAGGTCGCAGTGAAATTAGTCGAGTTGCGCGAAAGCTGGCTGGATACCACGGTCATGAACAAAATTAATTTTGATACAAAATTTGGGTATTTGGGTGGAGGACATTTTTCATGCAGATATTTTACAATTTTCTTAAAAAAACTAGAGAGTGATTCCATGTTTTGAGTTCTTTACACTTGCAAATGTAAATAGCTTTGTAATTTTAAAAGAATTAGACCTTGTGATAATCTATAGATTCTTGAGTATCTATTTTGTTACTTTTTTTGTTTAAACTTTTACTAGCTAGTTTGAGGAGAGATGAAAATAAGGAGGTGGATGATTATGCTGAACTGAAGGAGAAAGTGGAGAATTTTGGTATATGCTGCAATTCTGTTACTCCTGAAGAATACACAAGATTAATGTGTCCCAAGGTATGTGACATTTTATTTGGTGTTTCTTTTGGTTTACTTAAGTTTTTCTTTTAATGAGTTTCAAGTGGTTGGTATCTTTGAATTACATATACTGATATCAACTAGTTGGAATTTGTACCTGCAAGCGCACACTAGGAAAGGAAATAATGAGAGTTTGGTCATTGTTCTCTTTTCATGGTCATGCATTTGTACTAATTTGATGAGGAAATGCAAGATGAAAAATAATGAGTTGCATATTTCAAGGTTGATATAGCTGTGTAAAGTGTAAATTTTCCGCTCTTTATAACAGAGACTAGGGTAAAGTAATATATAGCCTTCAATTATAACATAATTCTTTAAACTGTTTGTTTGTTCATATATGAGTAGACGAGTAAACACATTTAAGATGTGCTTCTTTGTTTTCCAATTATACAACATAACCTTAATTTTCTGCTAATTAACTCTTGTGACAAAAAAATAAGTTGGGGTTTGTCATGGACACTTGGATATGTTTATTTTGTTTTGTTAAGCTAGATATGAGCCCCATTCATTTTCTTTTCCTTCTCTCTATATCTTTGTATTTATTTGTCTCTTTTGAAACAGTGTAAAGGTGGTCGGTCAATGGAAAAGAGTTTATCATTTCATATGTCCTCGAAAAGGTATGATAGTTCTCATGTTCAATGATGATCTTCTTTTACAAGCAACTAGAGTTCTTCAAACTTGATTTTGTGGTCATCAAGGAATTCTGCATTATGGAGGTGTTTCAATATTGACTGTGGATGGGCAGGCCAGGTAGTTTAATTTATGGTTTTAAAATTTGTTTACTTTAATTTCTGAGAGATAGAAGTTAAATCACCTCATTGGATATTAATTATGAATACAGATCCCACACAATAGTGCGGCATCTGATGGGGTCCATCAACGTGGCAGAATAAATTTTCCTCGGATACTTACAGAGGAAAGCTTGAACTTAGAACCATTAGGTGATATGGTAAGGAAACTTTCTTTTGTCATGCATATACTAAATCTGATGGCCAGCATTGTATAGTCTAATATTTAGCACTGGGCAACAGATTTTCAACAATGCATTCCCTAATCTCTAAGCTAGTTTTAGAGGGTGTTTGGATTGACTTATTTTAAGTGATTTTGGCTTTTAAGATTGTTTTTTTTTTTTTTTTTGTGGTGCTTGGGAAAGATAAAAAGTGCTTTTAAGCACTTACTTTTAGGCCAAAAAAGTACAAATAATAAGCTAAAAGCTAAAAGTTGGTCATTCTTAACTTATGGCTTTTAGCTTATAAGCTACTTTTAAAGGCTAATCCAAACACCATCTTAGAGCAAGATGCCCCTTTCTTCTATTTTCATGAAGTAAATTTCATTAACAAAAGTACCGTCTTTTAAAAGGTAAGAAGCTCCTTACATACACTATGAGGAATCAATTATATTGTTGTTTTTGATTTTGCATATTACTCTACAAAGATAAGTTTTGCAAACATTTAAGTTGACATAATGGAGAGCATTGGTCTTCCCCTCAAAATTTAGGTTCGTTCCTTCTATACTGTCCAGGTTATGCATATTCGGGTAGTGCTTCCAAGGTGAATTCTTGATTCTCTCAAGCAGTTGATTGGGAATTCATGGTTCTTATGTTAGATTTGATAAATTCATTATTATGAGTGTAATTACATTTAGGCCTAATTAGAGCAATCAAATTTGTAGGGATTTTAACAAAGAAAAACTGATTCTGTAGCAATAAAATTATACAAGTCGCCCTTTTTTGTTTATTGCCTATGACTTTTGGGTGTATTACAGCTGGCTGCATATTTTTCTAAGAGGATGATATCAATGAATACTTTGAAGAGAAATCATGTCATGCAAATGGCTGGTGATCAGGTCAGACAATATTATGGTTTGGTAGAGTTTTTGATGGTTAATAAGAAGTAAAATTAAGTCAGTGCATCCAAATGCTCTGGGCACTCCTGATATCAATGGACAATGTTATTTCATTATTATTGATAGAGCTGTTGATTATTATTATTTTTTTTTTGATCAGGTAAGATAACTTGATTATCAATAAGAAGTAAACTTAATTCTGTTCGTCCAAATGGTTTTGATTATTAATAAGGAGTAAAATTGATTCTGCGCATGCAAGTGTTCTTGGCATTCATATGTCAATGCATATTTTAGATTTTCTTTAAGTTGCTTAACATGTGTAGGAATAGGACAAATCTCAGTTATGTGTTAAGAATGAACTTCTGAAAAAGTGCTCTGAAGTCATTAGCTTTACAACTTTGAGAATCTTCTATTTCTCTTTTAGCACACTCTCTTTCCAACTAAGAGTTCAAGGTAAACACATTTATTTGTAGGAGGAGATTGACTCATTGACATGAGAACCAGCAAGGCAACGGATTGATCAAGCTTTGACTTAAAATATATAAGAGAAAAAAGAAATTTCTAAATCTCAGGGCTGTTTAATGGCTAAAATTGTGTCAAAGAACAAATGAACAAAAGAAATATGACAAGGTTCATAAGTCTCACTAACTTGGAAAGCAAGTAAAACTCAAGAAACATGGAGATCATGGTAGATAATCTTATCATTAACCTCATTTTGAAACTGGAAAGTAATATTTTATGGCTGCATCATGGGTAGAGTCGTAGAGATATAAATTACATGCCAATATTTGGGTGCTTGCAGATCATCATTGCCTTCACTTATAGACGGAATGGTATGCTCATCGGCTGCAAGTATAGGACTCTTGAGAAAAGGTTTTGGCAGGTAAATTTGTTCTTTAAGTTACAACCCTAACTGCATGCATGGAGTAATGGGGAAGTACGTGAAAACACAATATGCCATTACTGCTTAACTATATGCAATGCATGCTTCCAATTCTTAAGCTAAAGTTAGTCTTGCAAAAGTTTCTCGATGAGCAAATTCTTTAGCTTCAAATTCCTTTTAATAAAAAAGATATTGTGTCCTTGGCTGAAATTAATAGTTTAGTATTGTTGCTCCTAATAAGCACACACATGCAGTCGCGCAAGTAATATAGTTTATTAAGAAACGAGTTTTCGTTCCCATGGGACTTATGATCAACTTATATTTATTAACTTAATTCCACAATTCGACAAAAGTAACTTTTTAAAAGGGTGAATGTTGTTAATCACTACTACAACTAATGCAATAAATAAAATAACTAATGTGAACGACTTTAATTTGATGTTTTAAGCAAGTAAGAGACAATTCCAGGGCTGCAGCATGCATTGGATTTCATGTATCGTACCTCAGGTAGTGAACTAATTAGGTTATCAAGCTACTGATTTACATGGTTGATTTTATGATTATGGTCTTCCGACCTCTAATCGCCTACTTTAGCTGTCTAACTACATCGTTGAACGGAGATAGACAGTCCTAATTGGCGAGCATTTATTTTTCATCTTGTTTTATAACTAAGCTAGGTGTTCGTCCGAGCGTCACTCCTAAATACAAATCAATTCAACTTAATGGAAGATCAAACTTTCTATATTCTTTGGTCTATCTACCTTAGCCTCTCTCGATTTTAAGAGCAGACAAGAGATTTATCTCTATGATGGCCAATCAAGAAATACTAAAACAAGAATAAAAAGTAACTTAAAACGATAACGAAGAATTGATTCAAAAACCTTTAATACTCCACAATCATTCCGTAGCTACATCCCCTGAACAAGGGCGTTTAGCCACTCATAATGTTCAAAAACCGCAAAATAGAATTGTTTATGCGATTTCCAAAATAAAGAAGAGATAGAAAATCGAAACCTGTTAGAAAACTTGGATGTTGCTCTTGCACACCAAAAAGTAGTCGAACCCTAACAAATAGCCCTAGGGTCCTATTTATAGAAGTTAGGAAAAGTATTTTCTAAATCTAATCCGACAAGGAGTCCTATTCAAGTCAACTTTCGCTGGGCATGTCGAAAACGGGCTGGGGCACCGCGGCAGACAGTGCCTTCAGTCGTTCCAGCTGTGGCGCGCCGCGCCAAGTAGTGCGCCTGGAGTTGCTTCTGCAGTTCTAGCCTTGGCGCCTCGCGCCAGGCAGTGCGTCTGAGGAAGGTGTCGAGTGTTGGCCTTGGCGCTTTGCGACCAGGTAGTGCGCCTGAAAAGGTCGCCTGTGGTTCTGGCCTTGGCGCCTCGCACCAGGCAGTGCGCCACTCACTGCTGTTTCCTCCTTAGTTTATTTTAATGCTTCCTTGCTTCTCCTTCCCTCGAATAGACTCCATTTACCTTGAAAGTTCCTGCATCACCTAATCATGTGTTTTAGTGCACAATCATCGCAAGTTAAACAAAACAAAACTAATAGTCTCAAGATTATTCTTAAATTCACCCCAAAGTAGGCATTTATTGGCAAATTCGGCATATAAATATGCCTAAGATCAAGTATCTTACAACAAGAAGGGGATTGTTTGTCATGCTAATACATATGACACTTCACAATTATATTGTGGTAATATTTATCAAAATTTTTAAAAATTGGTTCCTACTTTATGGGTTTTGGGTTTGGGACTCTTTTGAATAACTTTAGCCTATCCTCTGGACAAATGTTTCTGAACAGTTTCTTTGTGATGTCAATTTAAGAGTTTTTTCAAGCTTCCAGTCAGTGTCTGCTGTTTTCACTGACATTGATTTTTCTGAAGGAAAATTTGATATAGTCTGAACAGAGAAGTTAGTATTTTTCCTTATTTTCCTCGTGCCTTTATTAATCAACTTCTACTTTCGATTGCCAGGAGAAGGGTGCTGATAAGGTACTATATGGACTGGATGATGTAAGAGAAGCAGATGAGATCATCATTGTAAGTTCCAAAACTTTTTCTTTCTCAGATATGTATTTCTGTCTGCTGATTAGATGTGATACTCTATTGCTGACCAAAGGTAGAAGGTGAAATAGATAAGCTTTCAGTGGAAGAAGCTGGATTTCCTAACTGTGTCA-GTGTTCCTAATGGTGCACCACAGGGCATCGCATCCAAAGAACTGCTACCACTGG-AAGAGGTGTGTCACAAGTATTTTGACATAATGTTACCATTGTGGTTTACCACTTATTTTAAAATTATTTGATATTTAGGATTATATTTCCAGCTTAATAGTTCTTCTTGCACCTGAAGACAGGATACCAGATTTTCAT-ACCTGTGGAACTGCAATGAGTGCTT-GGAGAAGGTTGGTCGTCTTGATGCATTAAACTGAGAACACTAAGCAAAAGATATGTTCCTAATGTCATTGCTCATTCCTTTTCTATTTTTTAATTTATATGTTTTCAGGCGTCCCGGATTGTGC-TGGC-AACTGATGGTGA-TTTACCAGGCCAA-GCATTG</genome_strand>
        <mrna_strand>GGCAACTCTCATTAGAGCTCCTCCTGTTACACTCTACACTTTCATCTCAAGATTTTCGCCTAACAGTCATGGTTTTCTTACTATTACTCCTACTAGGCTCTTCATAACTGCAG........................................................................................................................................................................................................................................................................................................................................................................................................................CTAGCTTGAGGAGAGACGAAAATAAGGAGGTGGATGATTATGCTGAACTGAAGGAGAAAGTGGAAAATTTGGGTATATGCTGCAATTCTGTTACTCCTGAAGAATACACAAGATTAATGTGTCCCAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAAGGTGGTCGGTCAATGGGAAAGTGTTTATCATTTCATATGTCCTCGAAAAG.................................................................................GAATTCTGCATTATGGAGGTGTTTCAATATTGAATGTGGATGGGCAGGCCAG...........................................................................................ATCCCACACAACAGTACGGCATCTGATGGGGTCCATCAACTTGGCAGAATGAATTTTCCTCGGATACTTACAGAGGAAAGCTTGAAGTTAGAACCATTAGGTGACATG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATCATTGCCTTCACTTATAGGCGGAATGGTATGCTCATTGGCTGCAAGTATAGGACTCTTGAGAAAAGGTTTTGGCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAAGGGTGCAGATAAGGTACTATATGGACTGGATGATGTAAGAGAAGCAGATGAGATCATCATT...............................................................................GTAGAAGGTGAAATAGATAAGCTTTCAGTGGAAGAAGCTGGATTTCCTAACTGTGTTAGGTGTTCCTAATGGTGCACCACAGGGCATCGCATCCAAAGAACTGCTACCACTGGAAAGAG.....................................................................................................................GATACCAGATTTTCATAACCTGTGGAACTGCAATGAGTGCTTGGGAGAAAGGCG.................................................................................................G-TCCCCGGATTGTGCTTGGCAAACTGATGGTGATTTTACCAGGCCAAGGCATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E379757" ref_strand="+" ref_description="SGN-E379757 [TUS-1-F15]">
      <seq>aaaataaaaaccatatttgttgtacactaatgacataaactcaagtttgatacttttatcagttggtaaaaatgtaagcaagcaaagaagtagtgaaggccggaatgagatgtcatatgtagtatacaatctgatgacactacttgctaggtctccactacaagaactagccataatgtgttctccctgtatggagatatatcagtcatttgcatttgcagaggcaagattgcatcttcagagtttctcataagattttacttttctgtgccagttgtagcatctccatccatgctattcttctttttctttccatcaccatgtctggaccttctaggggcttcatcctcgctctcgctttcatcatttctaaagctgttttcagtttgtggataatgtaccccttcatctggtccaacaactgagcctgcagtctcttgacccctaccttggtctggacctgaactgaatctatcgttcctttcattaaaaggagctcgctgatcctttttgacccgaggattttgagagggcggtggtgggggtggtgtaaatgatggatgcattcccattggtcgaccacctctgggtgggccaggtgctccaggacccattccacccatgaaagggggccttgctggacccatcatcatcccaaatccaccagcagcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="+" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="96215" stop="97486"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="96515" g_stop="97186" g_length="672"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="672" r_length="672" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="+" ref_id="SGN-E379757" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>672</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E379757" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="96515" e_stop="97186"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATAAAAACCATATTTGTTGTACACTAGTGACATAAACTCAAGTTTGATACTTTTATCAGTTGGTAAAAATGTAAGCAAGCAAAGAAGTAGTGAAGGCCGGAATGAGATGTCATATGTAGTATACAATCTGATGACACTACTTGCTAGGTCTCCACTACAAGAACTAGCCATAATGTGTTCTCCCTGTATGGAGATATATCAGTCATTTGCATTTGCAGAGGCAAGATTGCATCTTCAGAGTTTCTCATAAGATTTTACTTTTCTGTGCCAGTAGTAGCATCTCCATCCATGCTATTCTTCTTTTTCTTTCCATCACCATGTCTGGACCTTCTAGGGGCTTCATCCTCGCTCTCGCTTTCATCATTTCTAAAGCTGTTTTCAGTTTGTGGATAATGTACTCCTTCATCTGGTCCAACAACTGAGCCTGCAGTCTCTTGACCCCTACCTTGGTCTGGACCTGAACTGAATCTATCGTTCCTTTCATTAAAAGGAGCTCGCTGATCCTTTTTGACCCGAGGATTTTGAGAGGGCGGTGGTGGGGGTGGTGTAAATGATGGATGCATTCCCATTGGTCGACCACCTCTGGGTGGGCCAGGTGCTCCAGGACCCATTCCACCCATGAAAGGGGGCCTTGCTGGACCCATCATCATCCCAAATCCACCAGCAGCC</genome_strand>
        <mrna_strand>AAAATAAAAACCATATTTGTTGTACACTAATGACATAAACTCAAGTTTGATACTTTTATCAGTTGGTAAAAATGTAAGCAAGCAAAGAAGTAGTGAAGGCCGGAATGAGATGTCATATGTAGTATACAATCTGATGACACTACTTGCTAGGTCTCCACTACAAGAACTAGCCATAATGTGTTCTCCCTGTATGGAGATATATCAGTCATTTGCATTTGCAGAGGCAAGATTGCATCTTCAGAGTTTCTCATAAGATTTTACTTTTCTGTGCCAGTTGTAGCATCTCCATCCATGCTATTCTTCTTTTTCTTTCCATCACCATGTCTGGACCTTCTAGGGGCTTCATCCTCGCTCTCGCTTTCATCATTTCTAAAGCTGTTTTCAGTTTGTGGATAATGTACCCCTTCATCTGGTCCAACAACTGAGCCTGCAGTCTCTTGACCCCTACCTTGGTCTGGACCTGAACTGAATCTATCGTTCCTTTCATTAAAAGGAGCTCGCTGATCCTTTTTGACCCGAGGATTTTGAGAGGGCGGTGGTGGGGGTGGTGTAAATGATGGATGCATTCCCATTGGTCGACCACCTCTGGGTGGGCCAGGTGCTCCAGGACCCATTCCACCCATGAAAGGGGGCCTTGCTGGACCCATCATCATCCCAAATCCACCAGCAGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E201272" ref_strand="+" ref_description="SGN-E201272 [cLEC-10-H13]">
      <seq>accatatttgttgtacactaatgacataaactcaagtttgatacttttatcagttggtaaaaatgtaagcaagcaaagaagtagtgaaggccggaatgagatgtcatatgtagtatacaatctgatgacactacttgctaggtctccactacaagaactagccataatgtgttctccctgtatggagatatatcagtcatttgcatttgcagaggcaagattgcatcttcagagtttctcataagattttacttttttgtgccagtggtagcatctccatgcatgctattcttatttttctttccatcaccatgtatggaccttctaagggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="+" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="96224" stop="97155"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="96524" g_stop="96855" g_length="332"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="332" r_length="332" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="+" ref_id="SGN-E201272" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>332</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E201272" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="96524" e_stop="96855"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCATATTTGTTGTACACTAGTGACATAAACTCAAGTTTGATACTTTTATCAGTTGGTAAAAATGTAAGCAAGCAAAGAAGTAGTGAAGGCCGGAATGAGATGTCATATGTAGTATACAATCTGATGACACTACTTGCTAGGTCTCCACTACAAGAACTAGCCATAATGTGTTCTCCCTGTATGGAGATATATCAGTCATTTGCATTTGCAGAGGCAAGATTGCATCTTCAGAGTTTCTCATAAGATTTTACTTTTCTGTGCCAGTAGTAGCATCTCCATCCATGCTATTCTTCTTTTTCTTTCCATCACCATGTCTGGACCTTCTAGGGGC</genome_strand>
        <mrna_strand>ACCATATTTGTTGTACACTAATGACATAAACTCAAGTTTGATACTTTTATCAGTTGGTAAAAATGTAAGCAAGCAAAGAAGTAGTGAAGGCCGGAATGAGATGTCATATGTAGTATACAATCTGATGACACTACTTGCTAGGTCTCCACTACAAGAACTAGCCATAATGTGTTCTCCCTGTATGGAGATATATCAGTCATTTGCATTTGCAGAGGCAAGATTGCATCTTCAGAGTTTCTCATAAGATTTTACTTTTTTGTGCCAGTGGTAGCATCTCCATGCATGCTATTCTTATTTTTCTTTCCATCACCATGTATGGACCTTCTAAGGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E380019" ref_strand="+" ref_description="SGN-E380019 [TUS-1-F15](-)">
      <seq>actacaagaactagccataatgtgttctccctgtatggagatatatcagtcatttgcatttgcagaggcaagattgcatcttcagagtttctcataagattttacttttctgtgccagttgtagcatctccatccatgctattcttctttttctttccatcaccatgtctggaccttctaggggcttcatcctcgctctcgctttcatcatttctaaagctgttttcagtttgtggataatgtaccccttcatctggtccaacaactgagcctgcagtctcttgacccctaccttggtctggacctgaactgaatctatcgttcctttcattaaaaggagctcgctgatcctttttgacccgaggattttgagagggcggtggtgggggtggtgtaaatgatggatgcattcccattggtcgaccacctctgggtgggccaggtgctccaggacccattccacccatgaaagggggccttgctggacccatcatcatcccaaatccaccagcagccggaggacggctgtgaaacatcatatcaccagggaatcgagggccaaatggtccaaaaggtcggccacccattccataaggatcaggcataggaaaaccatcaggtgtcattgatccataagaaaatccatcactcataatgcctggggggaagccccgcatcccagggaaaggcctggctccacgaaagagaactagaggaggcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0064E19-1QG8y/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0064E19.2" temp_strand="+" temp_description="C02SLm0064E19.2  AC215482.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0064E19 sequenced_by:kribb upload_account_name:korea">
        <position start="96371" stop="97691"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="96671" g_stop="97391" g_length="721"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="721" r_length="721" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0064E19.2" gen_strand="+" ref_id="SGN-E380019" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>721</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0064E19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E380019" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="96671" e_stop="97391"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTACAAGAACTAGCCATAATGTGTTCTCCCTGTATGGAGATATATCAGTCATTTGCATTTGCAGAGGCAAGATTGCATCTTCAGAGTTTCTCATAAGATTTTACTTTTCTGTGCCAGTAGTAGCATCTCCATCCATGCTATTCTTCTTTTTCTTTCCATCACCATGTCTGGACCTTCTAGGGGCTTCATCCTCGCTCTCGCTTTCATCATTTCTAAAGCTGTTTTCAGTTTGTGGATAATGTACTCCTTCATCTGGTCCAACAACTGAGCCTGCAGTCTCTTGACCCCTACCTTGGTCTGGACCTGAACTGAATCTATCGTTCCTTTCATTAAAAGGAGCTCGCTGATCCTTTTTGACCCGAGGATTTTGAGAGGGCGGTGGTGGGGGTGGTGTAAATGATGGATGCATTCCCATTGGTCGACCACCTCTGGGTGGGCCAGGTGCTCCAGGACCCATTCCACCCATGAAAGGGGGCCTTGCTGGACCCATCATCATCCCAAATCCACCAGCAGCCGGAGGACGGCTGTGAAACATCATATCACCAGGGAATCGAGGGCCAAATGGTCCAAAAGGTCGGCCACCCATTCCATAAGGATCAGGCATAGGAAAACCATCAGGTGTCATTGATCCATAAGAAAATCCATCACTCATAATGCCTGGGGGGAAGCCCCGCATCCCAGGGAAAGGCCTGGCTCCACGAAAAGGAACTAGAGGAGGCC</genome_strand>
        <mrna_strand>ACTACAAGAACTAGCCATAATGTGTTCTCCCTGTATGGAGATATATCAGTCATTTGCATTTGCAGAGGCAAGATTGCATCTTCAGAGTTTCTCATAAGATTTTACTTTTCTGTGCCAGTTGTAGCATCTCCATCCATGCTATTCTTCTTTTTCTTTCCATCACCATGTCTGGACCTTCTAGGGGCTTCATCCTCGCTCTCGCTTTCATCATTTCTAAAGCTGTTTTCAGTTTGTGGATAATGTACCCCTTCATCTGGTCCAACAACTGAGCCTGCAGTCTCTTGACCCCTACCTTGGTCTGGACCTGAACTGAATCTATCGTTCCTTTCATTAAAAGGAGCTCGCTGATCCTTTTTGACCCGAGGATTTTGAGAGGGCGGTGGTGGGGGTGGTGTAAATGATGGATGCATTCCCATTGGTCGACCACCTCTGGGTGGGCCAGGTGCTCCAGGACCCATTCCACCCATGAAAGGGGGCCTTGCTGGACCCATCATCATCCCAAATCCACCAGCAGCCGGAGGACGGCTGTGAAACATCATATCACCAGGGAATCGAGGGCCAAATGGTCCAAAAGGTCGGCCACCCATTCCATAAGGATCAGGCATAGGAAAACCATCAGGTGTCATTGATCCATAAGAAAATCCATCACTCATAATGCCTGGGGGGAAGCCCCGCATCCCAGGGAAAGGCCTGGCTCCACGAAAGAGAACTAGAGGAGGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>65</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="22621" PGL_stop="22243"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="22621" e_stop="22243"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.947"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.947">
            <gDNA_exon_boundary e_start="22621" e_stop="22243" e_length="379"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22621" stop="22243"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351886" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAAAATGTGTGATTTTTCTTTGAAAAAGAATATACCAACCACAATGTACGAAGATAATGTTGCATGTATAGCTCAATTGAAAGGAGGATACATCAAAGGAGACCGAACAAAGCATATCTCACTAAACACTTTTTCACGCATGATCTTTAACAAAATGGTGAGATAGAAGTTCAACAAATTCGTTCAAGTGATAATCTTGCTGATTTATTCACTAAGGCATTGCCAACATCAACGTTGAGAAGTTGAGATACAAGATTGGGATGCGCCGTCTTCGAGATATCAAGTAAAGTTTTCATCAGGGGGAGTGAAATACACGTTGTACTCTTTTCCTTAACTATGGTTTTGTCCCAAGTTGGGTTTTCCTGGTAAGGTTTTTAAC</gDNA_template>
            <first_frame> E  N  V  *  F  F  F  E  K  E  Y  T  N  H  N  V  R  R  *  C  C  M  Y  S  S  I  E  R  R  I  H  Q  R  R  P  N  K  A  Y  L  T  K  H  F  F  T  H  D  L  *  Q  N  G  E  I  E  V  Q  Q  I  R  S  S  D  N  L  A  D  L  F  T  K  A  L  P  T  S  T  L  R  S  *  D  T  R  L  G  C  A  V  F  E  I  S  S  K  V  F  I  R  G  S  E  I  H  V  V  L  F  S  L  T  M  V  L  S  Q  V  G  F  S  W  *  G  F  *  </first_frame>
            <second_frame>  K  M  C  D  F  S  L  K  K  N  I  P  T  T  M  Y  E  D  N  V  A  C  I  A  Q  L  K  G  G  Y  I  K  G  D  R  T  K  H  I  S  L  N  T  F  S  R  M  I  F  N  K  M  V  R  *  K  F  N  K  F  V  Q  V  I  I  L  L  I  Y  S  L  R  H  C  Q  H  Q  R  *  E  V  E  I  Q  D  W  D  A  P  S  S  R  Y  Q  V  K  F  S  S  G  G  V  K  Y  T  L  Y  S  F  P  *  L  W  F  C  P  K  L  G  F  P  G  K  V  F  N </second_frame>
            <third_frame>   K  C  V  I  F  L  *  K  R  I  Y  Q  P  Q  C  T  K  I  M  L  H  V  *  L  N  *  K  E  D  T  S  K  E  T  E  Q  S  I  S  H  *  T  L  F  H  A  *  S  L  T  K  W  *  D  R  S  S  T  N  S  F  K  *  *  S  C  *  F  I  H  *  G  I  A  N  I  N  V  E  K  L  R  Y  K  I  G  M  R  R  L  R  D  I  K  *  S  F  H  Q  G  E  *  N  T  R  C  T  L  F  L  N  Y  G  F  V  P  S  W  V  F  L  V  R  F  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLm0064E19.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="23367" PGL_stop="22700"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="23367" e_stop="22700"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.939"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.939">
            <gDNA_exon_boundary e_start="23367" e_stop="22700" e_length="668"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23367" stop="22730"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E205887" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23327" stop="22700"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E209835" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23327" stop="22752"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E209830" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23277" stop="22725"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E299938" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CGATTTGTCCCTGCATTTTCATTAGATGGTTGAGGACTGAATTTGTTATAATAGTTGTGTATGTTGATGATTTGAGCATCATTGGCACTCGTAAAGAGCTTTTAGAAGTTGTTGAGTGTCTGAAAAAAAATTTGAAATGAAATATCTCGGCAAGACAAAATTTTGTCTTGGCCTACAGATTGAGAATTTGTCAAATAGAATACTTGTTCATTAATCAACATACACAGAAAAGATACTAAAGCGTTTTTACATGGATAACTCACATCCATTGAGTACTCCAACGGTGCTAAGATCGCTTGACATCAATACAGATCCATTTCGACCTCAAAAGAATGATGAAGAGCTTCTTGGTGATGAAACTCCTTATCTTAGTGCGATTGAGGCACTAATGTACCTTGCTAACAGTACTCGACCAGATATCTGTTTTGCAGTAAGTCTACTAGCAAGATTCAGTTCCTCCCCAACAAAAAGACATTGGAATGGTGTTAAACACATACTTCGATATCTTCGAGGGACCATGAACATGGATTTATTCTATTCCAATGAGTCCAAGTCAGAACTGATTGATTTACGCAGATGCAGGGTATTTATTTGATTCGTATAAAGCTCGATCACAAATATGCTATTTGCTTACATGTGGAGACACAACCATATTTTGGTGATCAATG</gDNA_template>
            <first_frame> R  F  V  P  A  F  S  L  D  G  *  G  L  N  L  L  *  *  L  C  M  L  M  I  *  A  S  L  A  L  V  K  S  F  *  K  L  L  S  V  *  K  K  I  *  N  E  I  S  R  Q  D  K  I  L  S  W  P  T  D  *  E  F  V  K  *  N  T  C  S  L  I  N  I  H  R  K  D  T  K  A  F  L  H  G  *  L  T  S  I  E  Y  S  N  G  A  K  I  A  *  H  Q  Y  R  S  I  S  T  S  K  E  *  *  R  A  S  W  *  *  N  S  L  S  *  C  D  *  G  T  N  V  P  C  *  Q  Y  S  T  R  Y  L  F  C  S  K  S  T  S  K  I  Q  F  L  P  N  K  K  T  L  E  W  C  *  T  H  T  S  I  S  S  R  D  H  E  H  G  F  I  L  F  Q  *  V  Q  V  R  T  D  *  F  T  Q  M  Q  G  I  Y  L  I  R  I  K  L  D  H  K  Y  A  I  C  L  H  V  E  T  Q  P  Y  F  G  D  Q   </first_frame>
            <second_frame>  D  L  S  L  H  F  H  *  M  V  E  D  *  I  C  Y  N  S  C  V  C  *  *  F  E  H  H  W  H  S  *  R  A  F  R  S  C  *  V  S  E  K  K  F  E  M  K  Y  L  G  K  T  K  F  C  L  G  L  Q  I  E  N  L  S  N  R  I  L  V  H  *  S  T  Y  T  E  K  I  L  K  R  F  Y  M  D  N  S  H  P  L  S  T  P  T  V  L  R  S  L  D  I  N  T  D  P  F  R  P  Q  K  N  D  E  E  L  L  G  D  E  T  P  Y  L  S  A  I  E  A  L  M  Y  L  A  N  S  T  R  P  D  I  C  F  A  V  S  L  L  A  R  F  S  S  S  P  T  K  R  H  W  N  G  V  K  H  I  L  R  Y  L  R  G  T  M  N  M  D  L  F  Y  S  N  E  S  K  S  E  L  I  D  L  R  R  C  R  V  F  I  *  F  V  *  S  S  I  T  N  M  L  F  A  Y  M  W  R  H  N  H  I  L  V  I  N  </second_frame>
            <third_frame>   I  C  P  C  I  F  I  R  W  L  R  T  E  F  V  I  I  V  V  Y  V  D  D  L  S  I  I  G  T  R  K  E  L  L  E  V  V  E  C  L  K  K  N  L  K  *  N  I  S  A  R  Q  N  F  V  L  A  Y  R  L  R  I  C  Q  I  E  Y  L  F  I  N  Q  H  T  Q  K  R  Y  *  S  V  F  T  W  I  T  H  I  H  *  V  L  Q  R  C  *  D  R  L  T  S  I  Q  I  H  F  D  L  K  R  M  M  K  S  F  L  V  M  K  L  L  I  L  V  R  L  R  H  *  C  T  L  L  T  V  L  D  Q  I  S  V  L  Q  *  V  Y  *  Q  D  S  V  P  P  Q  Q  K  D  I  G  M  V  L  N  T  Y  F  D  I  F  E  G  P  *  T  W  I  Y  S  I  P  M  S  P  S  Q  N  *  L  I  Y  A  D  A  G  Y  L  F  D  S  Y  K  A  R  S  Q  I  C  Y  L  L  T  C  G  D  T  T  I  F  W  *  S  M </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0064E19.2" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="23153" stop="22773"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>378</number_coding_nucleotides>
                  <number_encoded_amino_acids>126</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>STYTEKILKRFYMDNSHPLSTPTVLRSLDINTDPFRPQKNDEELLGDETPYLSAIEALMYLANSTRPDICFAVSLLARFSSSPTKRHWNGVKHILRYLRGTMNMDLFYSNESKSELIDLRRCRVFI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="25652" PGL_stop="25284"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="25652" e_stop="25284"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.913"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.913">
            <gDNA_exon_boundary e_start="25652" e_stop="25284" e_length="369"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25652" stop="25284"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E332350" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTATGAAAATGGCATATGTCAACACAATATCAGGTAGTACAAAATTAATTGAGGGCTTTGGAAGAGTGACCTTATTACTACCTGGAGGGACAATATTAAGCATTGATAATGCATTATATTGTAGTAAGCCTCAAAGAAACTTATTAAGTTTCAAAATTATTCGCCAAAATGGCTATTATGTTGAGACGACTAATGAAGGAAAGGTTGAATACCTTTACATTACTACAATTAATATAGCGAAGAAAATTGTGCATGAAAAATTACCTGCACTTTCTTCTGGGTTGTACTATACAAGTATAAGTACAGTTGAATCACATGCGGTAGTAAACAAAAAGTTTACTAATTTTAATGATTTTATCATTTGACATG</gDNA_template>
            <first_frame> L  *  K  W  H  M  S  T  Q  Y  Q  V  V  Q  N  *  L  R  A  L  E  E  *  P  Y  Y  Y  L  E  G  Q  Y  *  A  L  I  M  H  Y  I  V  V  S  L  K  E  T  Y  *  V  S  K  L  F  A  K  M  A  I  M  L  R  R  L  M  K  E  R  L  N  T  F  T  L  L  Q  L  I  *  R  R  K  L  C  M  K  N  Y  L  H  F  L  L  G  C  T  I  Q  V  *  V  Q  L  N  H  M  R  *  *  T  K  S  L  L  I  L  M  I  L  S  F  D  M </first_frame>
            <second_frame>  Y  E  N  G  I  C  Q  H  N  I  R  *  Y  K  I  N  *  G  L  W  K  S  D  L  I  T  T  W  R  D  N  I  K  H  *  *  C  I  I  L  *  *  A  S  K  K  L  I  K  F  Q  N  Y  S  P  K  W  L  L  C  *  D  D  *  *  R  K  G  *  I  P  L  H  Y  Y  N  *  Y  S  E  E  N  C  A  *  K  I  T  C  T  F  F  W  V  V  L  Y  K  Y  K  Y  S  *  I  T  C  G  S  K  Q  K  V  Y  *  F  *  *  F  Y  H  L  T   </second_frame>
            <third_frame>   M  K  M  A  Y  V  N  T  I  S  G  S  T  K  L  I  E  G  F  G  R  V  T  L  L  L  P  G  G  T  I  L  S  I  D  N  A  L  Y  C  S  K  P  Q  R  N  L  L  S  F  K  I  I  R  Q  N  G  Y  Y  V  E  T  T  N  E  G  K  V  E  Y  L  Y  I  T  T  I  N  I  A  K  K  I  V  H  E  K  L  P  A  L  S  S  G  L  Y  Y  T  S  I  S  T  V  E  S  H  A  V  V  N  K  K  F  T  N  F  N  D  F  I  I  *  H  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0064E19.2" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="25650" stop="25288"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>360</number_coding_nucleotides>
                  <number_encoded_amino_acids>120</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MKMAYVNTISGSTKLIEGFGRVTLLLPGGTILSIDNALYCSKPQRNLLSFKIIRQNGYYVETTNEGKVEYLYITTINIAKKIVHEKLPALSSGLYYTSISTVESHAVVNKKFTNFNDFII*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="27069" PGL_stop="26309"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="27069" e_stop="26309"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.955"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.955">
            <gDNA_exon_boundary e_start="27069" e_stop="26309" e_length="761"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27069" stop="26309"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E689229" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AACACGTTATCAGCACGAAGTTGCTACTTGCAAAGGTATTATATAAATATTTTTATTTAATTCACATATTCTCTCATAATTTCATTATGTCGAATTTATCCAAACTTGAGTTTGTGGCATTAGATATTTCTAGAAAGAATTATCTTGCATAGATACTCGATGCTGAGATTCACTTGGCTGCTAAAGGTCTTGATGCCACTATTACTCAGGGAAATGAAGCATCGAGTCAAGATAAGGCGAAGGCTATGATTTTCCTTCGTCATCATCTTGACGAGGGTCTGAAGATTGAATATCTAACGGTAAAAGATCCACTTGAATTGTGGACTGATTTAAAGGGAGATATGACCACCTAAAGGCAACAGTGTTGCCAAGAGCTCGTTATGAGCGGATGCATTTATGGTTTCAAGATTTTAAGACCGTAATTGAATACAACTCTGCTGTATTCAGGATAACCTCCCAGATGAAATTATGAGGGGAGACTATAAAAGATGAGGACATGTTGGAAAAGACACTTACTACTTTTCATGCCTCAAATGTGATATTGCAGCAGCAATATCGTGAAAGGGGTTTTCAGAAATATTCTGAACTAGTCTCATGTCTTTTGGTGGCTGAGCAACATAATGTTCTTTTAATGAAAAATCATGAAGCTCGTCCCACTGGAGCTGCTTCATTACCGGAGGCAAATGTGATGGGAGCACGTGATCAATCTGAAATAAAAAGAGATGATCATCGGGGCTATAATAATGCACGGGAGGTGACAA</gDNA_template>
            <first_frame> N  T  L  S  A  R  S  C  Y  L  Q  R  Y  Y  I  N  I  F  I  *  F  T  Y  S  L  I  I  S  L  C  R  I  Y  P  N  L  S  L  W  H  *  I  F  L  E  R  I  I  L  H  R  Y  S  M  L  R  F  T  W  L  L  K  V  L  M  P  L  L  L  R  E  M  K  H  R  V  K  I  R  R  R  L  *  F  S  F  V  I  I  L  T  R  V  *  R  L  N  I  *  R  *  K  I  H  L  N  C  G  L  I  *  R  E  I  *  P  P  K  G  N  S  V  A  K  S  S  L  *  A  D  A  F  M  V  S  R  F  *  D  R  N  *  I  Q  L  C  C  I  Q  D  N  L  P  D  E  I  M  R  G  D  Y  K  R  *  G  H  V  G  K  D  T  Y  Y  F  S  C  L  K  C  D  I  A  A  A  I  S  *  K  G  F  S  E  I  F  *  T  S  L  M  S  F  G  G  *  A  T  *  C  S  F  N  E  K  S  *  S  S  S  H  W  S  C  F  I  T  G  G  K  C  D  G  S  T  *  S  I  *  N  K  K  R  *  S  S  G  L  *  *  C  T  G  G  D   </first_frame>
            <second_frame>  T  R  Y  Q  H  E  V  A  T  C  K  G  I  I  *  I  F  L  F  N  S  H  I  L  S  *  F  H  Y  V  E  F  I  Q  T  *  V  C  G  I  R  Y  F  *  K  E  L  S  C  I  D  T  R  C  *  D  S  L  G  C  *  R  S  *  C  H  Y  Y  S  G  K  *  S  I  E  S  R  *  G  E  G  Y  D  F  P  S  S  S  S  *  R  G  S  E  D  *  I  S  N  G  K  R  S  T  *  I  V  D  *  F  K  G  R  Y  D  H  L  K  A  T  V  L  P  R  A  R  Y  E  R  M  H  L  W  F  Q  D  F  K  T  V  I  E  Y  N  S  A  V  F  R  I  T  S  Q  M  K  L  *  G  E  T  I  K  D  E  D  M  L  E  K  T  L  T  T  F  H  A  S  N  V  I  L  Q  Q  Q  Y  R  E  R  G  F  Q  K  Y  S  E  L  V  S  C  L  L  V  A  E  Q  H  N  V  L  L  M  K  N  H  E  A  R  P  T  G  A  A  S  L  P  E  A  N  V  M  G  A  R  D  Q  S  E  I  K  R  D  D  H  R  G  Y  N  N  A  R  E  V  T  </second_frame>
            <third_frame>   H  V  I  S  T  K  L  L  L  A  K  V  L  Y  K  Y  F  Y  L  I  H  I  F  S  H  N  F  I  M  S  N  L  S  K  L  E  F  V  A  L  D  I  S  R  K  N  Y  L  A  *  I  L  D  A  E  I  H  L  A  A  K  G  L  D  A  T  I  T  Q  G  N  E  A  S  S  Q  D  K  A  K  A  M  I  F  L  R  H  H  L  D  E  G  L  K  I  E  Y  L  T  V  K  D  P  L  E  L  W  T  D  L  K  G  D  M  T  T  *  R  Q  Q  C  C  Q  E  L  V  M  S  G  C  I  Y  G  F  K  I  L  R  P  *  L  N  T  T  L  L  Y  S  G  *  P  P  R  *  N  Y  E  G  R  L  *  K  M  R  T  C  W  K  R  H  L  L  L  F  M  P  Q  M  *  Y  C  S  S  N  I  V  K  G  V  F  R  N  I  L  N  *  S  H  V  F  W  W  L  S  N  I  M  F  F  *  *  K  I  M  K  L  V  P  L  E  L  L  H  Y  R  R  Q  M  *  W  E  H  V  I  N  L  K  *  K  E  M  I  I  G  A  I  I  M  H  G  R  *  Q </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0064E19.2" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="26597" stop="26310"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>288</number_coding_nucleotides>
                  <number_encoded_amino_acids>96</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GETIKDEDMLEKTLTTFHASNVILQQQYRERGFQKYSELVSCLLVAEQHNVLLMKNHEARPTGAASLPEANVMGARDQSEIKRDDHRGYNNAREVT</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0064E19.2" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="26917" stop="26717"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ILDAEIHLAAKGLDATITQGNEASSQDKAKAMIFLRHHLDEGLKIEYLTVKDPLELWTDLKGDMTT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="28023" PGL_stop="31593"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="28023" e_stop="28049"/>
            <exon e_start="28308" e_stop="28561"/>
            <exon e_start="29148" e_stop="29469"/>
            <exon e_start="31306" e_stop="31593"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.985" acc_prob="0.996" e_score="0.889"/>
          <exon-intron don_prob="0.652" acc_prob="0.918" e_score="0.904"/>
          <exon-intron don_prob="0.992" acc_prob="0.989" e_score="0.941"/>
          <exon-only e_score="0.899"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.889">
            <gDNA_exon_boundary e_start="28023" e_stop="28049" e_length="27"/>
          </exon>
          <intron i_serial="1" don_prob="0.985" acc_prob="0.996">
            <gDNA_intron_boundary i_start="28050" i_stop="28307" i_length="258"/>
          </intron>
          <exon e_serial="2" e_score="0.904">
            <gDNA_exon_boundary e_start="28308" e_stop="28561" e_length="254"/>
          </exon>
          <intron i_serial="2" don_prob="0.652" acc_prob="0.918">
            <gDNA_intron_boundary i_start="28562" i_stop="29147" i_length="586"/>
          </intron>
          <exon e_serial="3" e_score="0.941">
            <gDNA_exon_boundary e_start="29148" e_stop="29469" e_length="322"/>
          </exon>
          <intron i_serial="3" don_prob="0.992" acc_prob="0.989">
            <gDNA_intron_boundary i_start="29470" i_stop="31305" i_length="1836"/>
          </intron>
          <exon e_serial="4" e_score="0.899">
            <gDNA_exon_boundary e_start="31306" e_stop="31593" e_length="288"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28023" stop="28049"/>
              <exon start="28308" stop="28558"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E603154" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28422" stop="28561"/>
              <exon start="29148" stop="29469"/>
              <exon start="31306" stop="31593"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E548814" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCCAGTCAGGATTTCGGCTATTTTCAG : GTGATCAACCATGGGATTTCAGAAAAATTATTGGAAGAGACCATAGGTGTATTAAAAGAATTTTTTAACATGCCAGCTGAAGAGAAAGCAAAGTACTACTACACAGGTGACCCAAATAGCAAATGCAAACTCTACACAAGCAGTTATAATTATCAAAATGAAGATAAACATTGTTGGAGGGATACGTTAGCACATCATTGTCATCCTCTCCAAGATAACTTGCCTTTTTGGCCAGAAAAACCTACTCATTATCG : AGAAGTTATTAGTGCATATTCAATTGAAACAAGGAAACTAATCACAAAGATTTTAGATGTGATTAGTGAAGGATTAGGACTTGAAAAGGGGTATTTTGGAGGTGAATTAAGCAAAGTTCAAATGCTATCAGCTAATTATTATCCTCCATGTCCTGACCCAAATTTGGCACTTGGAATGCATAGCCATTGTGACCCAAATTTGCTCACAATTTTGCTTCAAGACAGTCATGTTTATGGCTTACAAATCTTCAAGAATGGAAAATGGATTGCTGTTGAACCTATTCCTAATGCATTTGTGGTCATCATTGGTTGCCAATTACAG : ATTATCAGTAACGATAGGCTAAAAAGTGTGATTCATCGAGCAGTGACAAATTCAAAAGAAACTAGAATTTGTGTGGGTAATTTTGTGATTCCTTCTTCAGATTGTCACATTGAACCTGCAAGTGAATTGGTTAAAAAAACAACAAATATTGCAGCATACAAATCTTATCAGTACAAAGAGTTCTTGCACGCCTATGAAATAAAACATGGAGATTTTGAAGCTCTACTTCAATCTTATAAGCTCTAATTTATAAACTTAATTATGTATGTGTCATGTGTGTCACTATAT</gDNA_template>
            <first_frame> A  S  Q  D  F  G  Y  F  Q  :  V  I  N  H  G  I  S  E  K  L  L  E  E  T  I  G  V  L  K  E  F  F  N  M  P  A  E  E  K  A  K  Y  Y  Y  T  G  D  P  N  S  K  C  K  L  Y  T  S  S  Y  N  Y  Q  N  E  D  K  H  C  W  R  D  T  L  A  H  H  C  H  P  L  Q  D  N  L  P  F  W  P  E  K  P  T  H  Y  R :   E  V  I  S  A  Y  S  I  E  T  R  K  L  I  T  K  I  L  D  V  I  S  E  G  L  G  L  E  K  G  Y  F  G  G  E  L  S  K  V  Q  M  L  S  A  N  Y  Y  P  P  C  P  D  P  N  L  A  L  G  M  H  S  H  C  D  P  N  L  L  T  I  L  L  Q  D  S  H  V  Y  G  L  Q  I  F  K  N  G  K  W  I  A  V  E  P  I  P  N  A  F  V  V  I  I  G  C  Q  L  Q  :  I  I  S  N  D  R  L  K  S  V  I  H  R  A  V  T  N  S  K  E  T  R  I  C  V  G  N  F  V  I  P  S  S  D  C  H  I  E  P  A  S  E  L  V  K  K  T  T  N  I  A  A  Y  K  S  Y  Q  Y  K  E  F  L  H  A  Y  E  I  K  H  G  D  F  E  A  L  L  Q  S  Y  K  L  *  F  I  N  L  I  M  Y  V  S  C  V  S  L  Y </first_frame>
            <second_frame>  P  V  R  I  S  A  I  F  R :   *  S  T  M  G  F  Q  K  N  Y  W  K  R  P  *  V  Y  *  K  N  F  L  T  C  Q  L  K  R  K  Q  S  T  T  T  Q  V  T  Q  I  A  N  A  N  S  T  Q  A  V  I  I  I  K  M  K  I  N  I  V  G  G  I  R  *  H  I  I  V  I  L  S  K  I  T  C  L  F  G  Q  K  N  L  L  I  I   : E  K  L  L  V  H  I  Q  L  K  Q  G  N  *  S  Q  R  F  *  M  *  L  V  K  D  *  D  L  K  R  G  I  L  E  V  N  *  A  K  F  K  C  Y  Q  L  I  I  I  L  H  V  L  T  Q  I  W  H  L  E  C  I  A  I  V  T  Q  I  C  S  Q  F  C  F  K  T  V  M  F  M  A  Y  K  S  S  R  M  E  N  G  L  L  L  N  L  F  L  M  H  L  W  S  S  L  V  A  N  Y  R :   L  S  V  T  I  G  *  K  V  *  F  I  E  Q  *  Q  I  Q  K  K  L  E  F  V  W  V  I  L  *  F  L  L  Q  I  V  T  L  N  L  Q  V  N  W  L  K  K  Q  Q  I  L  Q  H  T  N  L  I  S  T  K  S  S  C  T  P  M  K  *  N  M  E  I  L  K  L  Y  F  N  L  I  S  S  N  L  *  T  *  L  C  M  C  H  V  C  H  Y   </second_frame>
            <third_frame>   Q  S  G  F  R  L  F  S   : G  D  Q  P  W  D  F  R  K  I  I  G  R  D  H  R  C  I  K  R  I  F  *  H  A  S  *  R  E  S  K  V  L  L  H  R  *  P  K  *  Q  M  Q  T  L  H  K  Q  L  *  L  S  K  *  R  *  T  L  L  E  G  Y  V  S  T  S  L  S  S  S  P  R  *  L  A  F  L  A  R  K  T  Y  S  L  S  :  R  S  Y  *  C  I  F  N  *  N  K  E  T  N  H  K  D  F  R  C  D  *  *  R  I  R  T  *  K  G  V  F  W  R  *  I  K  Q  S  S  N  A  I  S  *  L  L  S  S  M  S  *  P  K  F  G  T  W  N  A  *  P  L  *  P  K  F  A  H  N  F  A  S  R  Q  S  C  L  W  L  T  N  L  Q  E  W  K  M  D  C  C  *  T  Y  S  *  C  I  C  G  H  H  W  L  P  I  T   : D  Y  Q  *  R  *  A  K  K  C  D  S  S  S  S  D  K  F  K  R  N  *  N  L  C  G  *  F  C  D  S  F  F  R  L  S  H  *  T  C  K  *  I  G  *  K  N  N  K  Y  C  S  I  Q  I  L  S  V  Q  R  V  L  A  R  L  *  N  K  T  W  R  F  *  S  S  T  S  I  L  *  A  L  I  Y  K  L  N  Y  V  C  V  M  C  V  T  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0064E19.2" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="28023" stop="28049"/>
                    <exon start="28308" stop="28561"/>
                    <exon start="29148" stop="29469"/>
                    <exon start="31306" stop="31551"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>846</number_coding_nucleotides>
                  <number_encoded_amino_acids>282</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ASQDFGYFQVINHGISEKLLEETIGVLKEFFNMPAEEKAKYYYTGDPNSKCKLYTSSYNYQNEDKHCWRDTLAHHCHPLQDNLPFWPEKPTHYREVISAYSIETRKLITKILDVISEGLGLEKGYFGGELSKVQMLSANYYPPCPDPNLALGMHSHCDPNLLTILLQDSHVYGLQIFKNGKWIAVEPIPNAFVVIIGCQLQIISNDRLKSVIHRAVTNSKETRICVGNFVIPSSDCHIEPASELVKKTTNIAAYKSYQYKEFLHAYEIKHGDFEALLQSYKL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="29016" e_stop="29469"/>
            <exon e_start="31306" e_stop="31593"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.992" acc_prob="0.989" e_score="0.960"/>
          <exon-only e_score="0.931"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.960">
            <gDNA_exon_boundary e_start="29016" e_stop="29469" e_length="454"/>
          </exon>
          <intron i_serial="1" don_prob="0.992" acc_prob="0.989">
            <gDNA_intron_boundary i_start="29470" i_stop="31305" i_length="1836"/>
          </intron>
          <exon e_serial="2" e_score="0.931">
            <gDNA_exon_boundary e_start="31306" e_stop="31593" e_length="288"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29016" stop="29469"/>
              <exon start="31306" stop="31593"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E425097" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATCATCATGTCTGTTTCGCTAACTGTTGGGTGATATTTTAGATATGAAACTGAATAGTTCAAGTAGCAATAACGCAGATGTTACTTTTTGCTATTATTATATTTAAATTTGTTTCCTAATTACCAATTTCAGAGAAGTTATTAGTGCATATTCAATTGAAACAAGGAAACTAATCACAAAGATTTTAGATGTGATTAGTGAAGGATTAGGACTTGAAAAGGGGTATTTTGGAGGTGAATTAAGCAAAGTTCAAATGCTATCAGCTAATTATTATCCTCCATGTCCTGACCCAAATTTGGCACTTGGAATGCATAGCCATTGTGACCCAAATTTGCTCACAATTTTGCTTCAAGACAGTCATGTTTATGGCTTACAAATCTTCAAGAATGGAAAATGGATTGCTGTTGAACCTATTCCTAATGCATTTGTGGTCATCATTGGTTGCCAATTACAG : ATTATCAGTAACGATAGGCTAAAAAGTGTGATTCATCGAGCAGTGACAAATTCAAAAGAAACTAGAATTTGTGTGGGTAATTTTGTGATTCCTTCTTCAGATTGTCACATTGAACCTGCAAGTGAATTGGTTAAAAAAACAACAAATATTGCAGCATACAAATCTTATCAGTACAAAGAGTTCTTGCACGCCTATGAAATAAAACATGGAGATTTTGAAGCTCTACTTCAATCTTATAAGCTCTAATTTATAAACTTAATTATGTATGTGTCATGTGTGTCACTATAT</gDNA_template>
            <first_frame> I  I  M  S  V  S  L  T  V  G  *  Y  F  R  Y  E  T  E  *  F  K  *  Q  *  R  R  C  Y  F  L  L  L  L  Y  L  N  L  F  P  N  Y  Q  F  Q  R  S  Y  *  C  I  F  N  *  N  K  E  T  N  H  K  D  F  R  C  D  *  *  R  I  R  T  *  K  G  V  F  W  R  *  I  K  Q  S  S  N  A  I  S  *  L  L  S  S  M  S  *  P  K  F  G  T  W  N  A  *  P  L  *  P  K  F  A  H  N  F  A  S  R  Q  S  C  L  W  L  T  N  L  Q  E  W  K  M  D  C  C  *  T  Y  S  *  C  I  C  G  H  H  W  L  P  I  T   : D  Y  Q  *  R  *  A  K  K  C  D  S  S  S  S  D  K  F  K  R  N  *  N  L  C  G  *  F  C  D  S  F  F  R  L  S  H  *  T  C  K  *  I  G  *  K  N  N  K  Y  C  S  I  Q  I  L  S  V  Q  R  V  L  A  R  L  *  N  K  T  W  R  F  *  S  S  T  S  I  L  *  A  L  I  Y  K  L  N  Y  V  C  V  M  C  V  T  I  </first_frame>
            <second_frame>  S  S  C  L  F  R  *  L  L  G  D  I  L  D  M  K  L  N  S  S  S  S  N  N  A  D  V  T  F  C  Y  Y  Y  I  *  I  C  F  L  I  T  N  F  R  E  V  I  S  A  Y  S  I  E  T  R  K  L  I  T  K  I  L  D  V  I  S  E  G  L  G  L  E  K  G  Y  F  G  G  E  L  S  K  V  Q  M  L  S  A  N  Y  Y  P  P  C  P  D  P  N  L  A  L  G  M  H  S  H  C  D  P  N  L  L  T  I  L  L  Q  D  S  H  V  Y  G  L  Q  I  F  K  N  G  K  W  I  A  V  E  P  I  P  N  A  F  V  V  I  I  G  C  Q  L  Q  :  I  I  S  N  D  R  L  K  S  V  I  H  R  A  V  T  N  S  K  E  T  R  I  C  V  G  N  F  V  I  P  S  S  D  C  H  I  E  P  A  S  E  L  V  K  K  T  T  N  I  A  A  Y  K  S  Y  Q  Y  K  E  F  L  H  A  Y  E  I  K  H  G  D  F  E  A  L  L  Q  S  Y  K  L  *  F  I  N  L  I  M  Y  V  S  C  V  S  L  Y </second_frame>
            <third_frame>   H  H  V  C  F  A  N  C  W  V  I  F  *  I  *  N  *  I  V  Q  V  A  I  T  Q  M  L  L  F  A  I  I  I  F  K  F  V  S  *  L  P  I  S  E  K  L  L  V  H  I  Q  L  K  Q  G  N  *  S  Q  R  F  *  M  *  L  V  K  D  *  D  L  K  R  G  I  L  E  V  N  *  A  K  F  K  C  Y  Q  L  I  I  I  L  H  V  L  T  Q  I  W  H  L  E  C  I  A  I  V  T  Q  I  C  S  Q  F  C  F  K  T  V  M  F  M  A  Y  K  S  S  R  M  E  N  G  L  L  L  N  L  F  L  M  H  L  W  S  S  L  V  A  N  Y  R :   L  S  V  T  I  G  *  K  V  *  F  I  E  Q  *  Q  I  Q  K  K  L  E  F  V  W  V  I  L  *  F  L  L  Q  I  V  T  L  N  L  Q  V  N  W  L  K  K  Q  Q  I  L  Q  H  T  N  L  I  S  T  K  S  S  C  T  P  M  K  *  N  M  E  I  L  K  L  Y  F  N  L  I  S  S  N  L  *  T  *  L  C  M  C  H  V  C  H  Y   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0064E19.2" strand="+"/>
                <serials PGL_serial="5" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="29122" stop="29469"/>
                    <exon start="31306" stop="31551"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>591</number_coding_nucleotides>
                  <number_encoded_amino_acids>197</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ICFLITNFREVISAYSIETRKLITKILDVISEGLGLEKGYFGGELSKVQMLSANYYPPCPDPNLALGMHSHCDPNLLTILLQDSHVYGLQIFKNGKWIAVEPIPNAFVVIIGCQLQIISNDRLKSVIHRAVTNSKETRICVGNFVIPSSDCHIEPASELVKKTTNIAAYKSYQYKEFLHAYEIKHGDFEALLQSYKL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="36456" PGL_stop="35380"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="36456" e_stop="35380"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.922"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.922">
            <gDNA_exon_boundary e_start="36456" e_stop="35380" e_length="1077"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36456" stop="35882"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E205691" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36441" stop="35953"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312488" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36390" stop="35708"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E582127" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36380" stop="35825"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E208960" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35990" stop="35498"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E202364" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35669" stop="35380"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E210280" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GATGATGAAAATTCCATTATTTCCCTCTTGTCTTATTATTTTTCTTGTTTTTGCTACTTCAATAAGTCCTTCACATGAACATCAATTATCATTTCTTGAATGTCTTGAAGCAAATTCAAACCCTACTTATCCAATTTCTTCATTAGTATTTTCTCCAAATAATTCTTCATTTCCATCTATTTTGCAAGCTTACATAAGAAATTTAAGATTCAATGAGTCTACAACTAGGAAACCTCTCTTCATACTCACAGCTCAACATGAATCTCATATTCAAGCATCAATTGTTTGTGCAAAATCACAAGGTGTGCAAATGAAAATTAGAAGTGGAGGGCATGACTACGAGGGTCTTTCTTATGTATCCAACGTACCATTTTTCATCGTTGACATGTTCAATTTTCGATCGATAAATGTTAGTATTGACGATGAATCGGCTTGGGTTGAAGTAGGTGCAACCCTTGGCGAAGTTTACTATAGAATCGCGGAAAAAAGCAACATTTATGGATTTCCCGCGGGAGTTTGCCCTACCGTCGGAGTTGGTGGACACTTTAGTGGGGCCGGTTATGGTAACATGATGAGGAAATACGGTTTAACGGTCGATAATATCGACGATGCAAAATTAATTGATGTTAATGGACGAATCCTCGATCGTAAATCGATGGGGGAGGATTTATTTTGGGCTATTACGGGTGGTGGTGGGGTGAGTTATGGAGTTGTATTGTCGTATAAAATAAAGTTGGTACGAGTTCCACCAAAGGTGACCGTTTTTCGAGTCCCGAGATTTTATGACCAAAATGCCCTTGACCTTGCTTACCTGTGGCAACGTCGCGCTAACACGTGGGACAATGACCTATTCATGAGAATGATCATTGACGTAGTCAATAGAACTACACGTACCTCGGAGAAAACCATTAGGGTTTCCTTTTTTACTCTATATCTTGGAGACTCGAACAGACTCCTCTCACTTCTCAACCAGAGTTTCCCAGAGCTAGGGTTAGAACGAAAGGATTGCATCGAGATGTCTTGGATCGAATCCGTGCTTTACTATACAAATTCCCCAATTACCCCTATTGATGCTTT</gDNA_template>
            <first_frame> D  D  E  N  S  I  I  S  L  L  S  Y  Y  F  S  C  F  C  Y  F  N  K  S  F  T  *  T  S  I  I  I  S  *  M  S  *  S  K  F  K  P  Y  L  S  N  F  F  I  S  I  F  S  K  *  F  F  I  S  I  Y  F  A  S  L  H  K  K  F  K  I  Q  *  V  Y  N  *  E  T  S  L  H  T  H  S  S  T  *  I  S  Y  S  S  I  N  C  L  C  K  I  T  R  C  A  N  E  N  *  K  W  R  A  *  L  R  G  S  F  L  C  I  Q  R  T  I  F  H  R  *  H  V  Q  F  S  I  D  K  C  *  Y  *  R  *  I  G  L  G  *  S  R  C  N  P  W  R  S  L  L  *  N  R  G  K  K  Q  H  L  W  I  S  R  G  S  L  P  Y  R  R  S  W  W  T  L  *  W  G  R  L  W  *  H  D  E  E  I  R  F  N  G  R  *  Y  R  R  C  K  I  N  *  C  *  W  T  N  P  R  S  *  I  D  G  G  G  F  I  L  G  Y  Y  G  W  W  W  G  E  L  W  S  C  I  V  V  *  N  K  V  G  T  S  S  T  K  G  D  R  F  S  S  P  E  I  L  *  P  K  C  P  *  P  C  L  P  V  A  T  S  R  *  H  V  G  Q  *  P  I  H  E  N  D  H  *  R  S  Q  *  N  Y  T  Y  L  G  E  N  H  *  G  F  L  F  Y  S  I  S  W  R  L  E  Q  T  P  L  T  S  Q  P  E  F  P  R  A  R  V  R  T  K  G  L  H  R  D  V  L  D  R  I  R  A  L  L  Y  K  F  P  N  Y  P  Y  *  C  F </first_frame>
            <second_frame>  M  M  K  I  P  L  F  P  S  C  L  I  I  F  L  V  F  A  T  S  I  S  P  S  H  E  H  Q  L  S  F  L  E  C  L  E  A  N  S  N  P  T  Y  P  I  S  S  L  V  F  S  P  N  N  S  S  F  P  S  I  L  Q  A  Y  I  R  N  L  R  F  N  E  S  T  T  R  K  P  L  F  I  L  T  A  Q  H  E  S  H  I  Q  A  S  I  V  C  A  K  S  Q  G  V  Q  M  K  I  R  S  G  G  H  D  Y  E  G  L  S  Y  V  S  N  V  P  F  F  I  V  D  M  F  N  F  R  S  I  N  V  S  I  D  D  E  S  A  W  V  E  V  G  A  T  L  G  E  V  Y  Y  R  I  A  E  K  S  N  I  Y  G  F  P  A  G  V  C  P  T  V  G  V  G  G  H  F  S  G  A  G  Y  G  N  M  M  R  K  Y  G  L  T  V  D  N  I  D  D  A  K  L  I  D  V  N  G  R  I  L  D  R  K  S  M  G  E  D  L  F  W  A  I  T  G  G  G  G  V  S  Y  G  V  V  L  S  Y  K  I  K  L  V  R  V  P  P  K  V  T  V  F  R  V  P  R  F  Y  D  Q  N  A  L  D  L  A  Y  L  W  Q  R  R  A  N  T  W  D  N  D  L  F  M  R  M  I  I  D  V  V  N  R  T  T  R  T  S  E  K  T  I  R  V  S  F  F  T  L  Y  L  G  D  S  N  R  L  L  S  L  L  N  Q  S  F  P  E  L  G  L  E  R  K  D  C  I  E  M  S  W  I  E  S  V  L  Y  Y  T  N  S  P  I  T  P  I  D  A   </second_frame>
            <third_frame>   *  *  K  F  H  Y  F  P  L  V  L  L  F  F  L  F  L  L  L  Q  *  V  L  H  M  N  I  N  Y  H  F  L  N  V  L  K  Q  I  Q  T  L  L  I  Q  F  L  H  *  Y  F  L  Q  I  I  L  H  F  H  L  F  C  K  L  T  *  E  I  *  D  S  M  S  L  Q  L  G  N  L  S  S  Y  S  Q  L  N  M  N  L  I  F  K  H  Q  L  F  V  Q  N  H  K  V  C  K  *  K  L  E  V  E  G  M  T  T  R  V  F  L  M  Y  P  T  Y  H  F  S  S  L  T  C  S  I  F  D  R  *  M  L  V  L  T  M  N  R  L  G  L  K  *  V  Q  P  L  A  K  F  T  I  E  S  R  K  K  A  T  F  M  D  F  P  R  E  F  A  L  P  S  E  L  V  D  T  L  V  G  P  V  M  V  T  *  *  G  N  T  V  *  R  S  I  I  S  T  M  Q  N  *  L  M  L  M  D  E  S  S  I  V  N  R  W  G  R  I  Y  F  G  L  L  R  V  V  V  G  *  V  M  E  L  Y  C  R  I  K  *  S  W  Y  E  F  H  Q  R  *  P  F  F  E  S  R  D  F  M  T  K  M  P  L  T  L  L  T  C  G  N  V  A  L  T  R  G  T  M  T  Y  S  *  E  *  S  L  T  *  S  I  E  L  H  V  P  R  R  K  P  L  G  F  P  F  L  L  Y  I  L  E  T  R  T  D  S  S  H  F  S  T  R  V  S  Q  S  *  G  *  N  E  R  I  A  S  R  C  L  G  S  N  P  C  F  T  I  Q  I  P  Q  L  P  L  L  M  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0064E19.2" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36455" stop="35382"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1074</number_coding_nucleotides>
                  <number_encoded_amino_acids>358</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MMKIPLFPSCLIIFLVFATSISPSHEHQLSFLECLEANSNPTYPISSLVFSPNNSSFPSILQAYIRNLRFNESTTRKPLFILTAQHESHIQASIVCAKSQGVQMKIRSGGHDYEGLSYVSNVPFFIVDMFNFRSINVSIDDESAWVEVGATLGEVYYRIAEKSNIYGFPAGVCPTVGVGGHFSGAGYGNMMRKYGLTVDNIDDAKLIDVNGRILDRKSMGEDLFWAITGGGGVSYGVVLSYKIKLVRVPPKVTVFRVPRFYDQNALDLAYLWQRRANTWDNDLFMRMIIDVVNRTTRTSEKTIRVSFFTLYLGDSNRLLSLLNQSFPELGLERKDCIEMSWIESVLYYTNSPITPIDA</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="42185" PGL_stop="48908"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="42185" e_stop="42438"/>
            <exon e_start="42521" e_stop="42679"/>
            <exon e_start="42763" e_stop="42852"/>
            <exon e_start="42952" e_stop="43080"/>
            <exon e_start="43441" e_stop="43541"/>
            <exon e_start="43734" e_stop="43848"/>
            <exon e_start="44393" e_stop="44524"/>
            <exon e_start="45380" e_stop="45445"/>
            <exon e_start="45568" e_stop="45747"/>
            <exon e_start="45928" e_stop="46023"/>
            <exon e_start="46400" e_stop="46537"/>
            <exon e_start="47183" e_stop="47265"/>
            <exon e_start="47946" e_stop="47983"/>
            <exon e_start="48060" e_stop="48274"/>
            <exon e_start="48727" e_stop="48908"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="0.996"/>
          <exon-intron don_prob="0.777" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.771" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.932" e_score="1.000"/>
          <exon-intron don_prob="0.833" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.896" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.896" acc_prob="0.971" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.865" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="42185" e_stop="42438" e_length="254"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="42439" i_stop="42520" i_length="82"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="42521" e_stop="42679" e_length="159"/>
          </exon>
          <intron i_serial="2" don_prob="0.777" acc_prob="1.000">
            <gDNA_intron_boundary i_start="42680" i_stop="42762" i_length="83"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="42763" e_stop="42852" e_length="90"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.996">
            <gDNA_intron_boundary i_start="42853" i_stop="42951" i_length="99"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="42952" e_stop="43080" e_length="129"/>
          </exon>
          <intron i_serial="4" don_prob="0.997" acc_prob="0.771">
            <gDNA_intron_boundary i_start="43081" i_stop="43440" i_length="360"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="43441" e_stop="43541" e_length="101"/>
          </exon>
          <intron i_serial="5" don_prob="0.999" acc_prob="0.932">
            <gDNA_intron_boundary i_start="43542" i_stop="43733" i_length="192"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="43734" e_stop="43848" e_length="115"/>
          </exon>
          <intron i_serial="6" don_prob="0.833" acc_prob="0.996">
            <gDNA_intron_boundary i_start="43849" i_stop="44392" i_length="544"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="44393" e_stop="44524" e_length="132"/>
          </exon>
          <intron i_serial="7" don_prob="0.896" acc_prob="0.995">
            <gDNA_intron_boundary i_start="44525" i_stop="45379" i_length="855"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="45380" e_stop="45445" e_length="66"/>
          </exon>
          <intron i_serial="8" don_prob="0.896" acc_prob="0.971">
            <gDNA_intron_boundary i_start="45446" i_stop="45567" i_length="122"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="45568" e_stop="45747" e_length="180"/>
          </exon>
          <intron i_serial="9" don_prob="0.991" acc_prob="0.999">
            <gDNA_intron_boundary i_start="45748" i_stop="45927" i_length="180"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="45928" e_stop="46023" e_length="96"/>
          </exon>
          <intron i_serial="10" don_prob="0.865" acc_prob="1.000">
            <gDNA_intron_boundary i_start="46024" i_stop="46399" i_length="376"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="46400" e_stop="46537" e_length="138"/>
          </exon>
          <intron i_serial="11" don_prob="0.999" acc_prob="0.998">
            <gDNA_intron_boundary i_start="46538" i_stop="47182" i_length="645"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="47183" e_stop="47265" e_length="83"/>
          </exon>
          <intron i_serial="12" don_prob="0.999" acc_prob="0.996">
            <gDNA_intron_boundary i_start="47266" i_stop="47945" i_length="680"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="47946" e_stop="47983" e_length="38"/>
          </exon>
          <intron i_serial="13" don_prob="0.000" acc_prob="0.987">
            <gDNA_intron_boundary i_start="47984" i_stop="48059" i_length="76"/>
          </intron>
          <exon e_serial="14" e_score="1.000">
            <gDNA_exon_boundary e_start="48060" e_stop="48274" e_length="215"/>
          </exon>
          <intron i_serial="14" don_prob="0.995" acc_prob="0.999">
            <gDNA_intron_boundary i_start="48275" i_stop="48726" i_length="452"/>
          </intron>
          <exon e_serial="15" e_score="0.994">
            <gDNA_exon_boundary e_start="48727" e_stop="48908" e_length="182"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42185" stop="42438"/>
              <exon start="42521" stop="42679"/>
              <exon start="42763" stop="42852"/>
              <exon start="42952" stop="43080"/>
              <exon start="43441" stop="43541"/>
              <exon start="43734" stop="43848"/>
              <exon start="44393" stop="44524"/>
              <exon start="45380" stop="45445"/>
              <exon start="45568" stop="45747"/>
              <exon start="45928" stop="46023"/>
              <exon start="46400" stop="46537"/>
              <exon start="47183" stop="47265"/>
              <exon start="47946" stop="47983"/>
              <exon start="48060" stop="48274"/>
              <exon start="48727" stop="48775"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E746397" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42237" stop="42438"/>
              <exon start="42521" stop="42645"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E365610" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42254" stop="42438"/>
              <exon start="42521" stop="42679"/>
              <exon start="42763" stop="42852"/>
              <exon start="42952" stop="43080"/>
              <exon start="43441" stop="43541"/>
              <exon start="43734" stop="43747"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E452544" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42258" stop="42438"/>
              <exon start="42521" stop="42679"/>
              <exon start="42763" stop="42852"/>
              <exon start="42952" stop="43080"/>
              <exon start="43441" stop="43532"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E448355" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42258" stop="42438"/>
              <exon start="42521" stop="42679"/>
              <exon start="42763" stop="42852"/>
              <exon start="42952" stop="43080"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E559930" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42259" stop="42438"/>
              <exon start="42521" stop="42679"/>
              <exon start="42763" stop="42852"/>
              <exon start="42952" stop="43080"/>
              <exon start="43441" stop="43491"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E300855" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42260" stop="42438"/>
              <exon start="42521" stop="42679"/>
              <exon start="42763" stop="42852"/>
              <exon start="42952" stop="43080"/>
              <exon start="43441" stop="43541"/>
              <exon start="43734" stop="43794"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E332666" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42260" stop="42438"/>
              <exon start="42521" stop="42679"/>
              <exon start="42763" stop="42852"/>
              <exon start="42952" stop="43080"/>
              <exon start="43441" stop="43541"/>
              <exon start="43734" stop="43786"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E334158" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42266" stop="42438"/>
              <exon start="42521" stop="42679"/>
              <exon start="42763" stop="42852"/>
              <exon start="42952" stop="42995"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E438834" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42268" stop="42438"/>
              <exon start="42521" stop="42679"/>
              <exon start="42763" stop="42805"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355606" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42295" stop="42438"/>
              <exon start="42521" stop="42679"/>
              <exon start="42763" stop="42852"/>
              <exon start="42952" stop="43080"/>
              <exon start="43441" stop="43541"/>
              <exon start="43734" stop="43847"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E327954" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42296" stop="42438"/>
              <exon start="42521" stop="42679"/>
              <exon start="42763" stop="42852"/>
              <exon start="42952" stop="43012"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E324664" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42344" stop="42438"/>
              <exon start="42521" stop="42679"/>
              <exon start="42763" stop="42852"/>
              <exon start="42952" stop="43080"/>
              <exon start="43441" stop="43499"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E475141" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43482" stop="43541"/>
              <exon start="43734" stop="43848"/>
              <exon start="44393" stop="44524"/>
              <exon start="45380" stop="45445"/>
              <exon start="45568" stop="45671"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E372672" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43483" stop="43541"/>
              <exon start="43734" stop="43848"/>
              <exon start="44393" stop="44524"/>
              <exon start="45380" stop="45445"/>
              <exon start="45568" stop="45672"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290635" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43483" stop="43541"/>
              <exon start="43734" stop="43848"/>
              <exon start="44393" stop="44524"/>
              <exon start="45380" stop="45445"/>
              <exon start="45568" stop="45672"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E372673" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44417" stop="44524"/>
              <exon start="45380" stop="45445"/>
              <exon start="45568" stop="45747"/>
              <exon start="45928" stop="46023"/>
              <exon start="46400" stop="46537"/>
              <exon start="47183" stop="47265"/>
              <exon start="47946" stop="47983"/>
              <exon start="48060" stop="48200"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E705239" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45597" stop="45747"/>
              <exon start="45928" stop="46023"/>
              <exon start="46400" stop="46537"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E405144" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46417" stop="46537"/>
              <exon start="47183" stop="47265"/>
              <exon start="47946" stop="47983"/>
              <exon start="48060" stop="48274"/>
              <exon start="48727" stop="48908"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E428941" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47244" stop="47265"/>
              <exon start="47946" stop="47983"/>
              <exon start="48060" stop="48274"/>
              <exon start="48727" stop="48892"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228766" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47946" stop="47983"/>
              <exon start="48060" stop="48274"/>
              <exon start="48727" stop="48892"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E229054" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGAGGCCAGAGGGTATGAAAAGTTAGTAGCCGCGCTTAGGTTATTCCTTAAACCCTTTGTGTAGTAGTCTTCCCCCAAAACCCAAAACCCTCGCGTACCAGAGAATGAACAGAGAAGGAAGAGTTGAGATTGAGGAAGATGAAGAACAAACCTTCGAAGAATTGGGACTTGACCCTCGTCTAATCCGTGCTTTAACCAAGAAAACTATCGATAAACCAACTCCTATTCAGCGAGTTGCTATTCCTCTAATCCTC : GAAGGGAAAGATGTGGTTGCTCGAGCTAAGACTGGTTCTGGAAAGACATTTGCTTATCTCCTTCCTTTACTTCACAAGCTTTTTACTCAGTCATCTTCAACAAAGAATCTTGCTCCTACTGCGTTGATTCTTGTACCTACAAGGGAATTGTGTCAACAG : GTTTGTTCGGAGGCGAATTCGTTGATTGAACTATGTAGAGTGCAATTAAGGCTTGTCCAATTGACAAGTTCTATGTCTGTTTCTGAATTG : AGAACTACATTGGCGGGGCCTCCGGAGATCGTTATATCTACTCCTGCTTGTATACAGACATGCTTGTCAAATGGAGTTATTCAAGGGAAAGCTGTTCAAGATTCTCTGTCCATTCTCATTCTCGATGAG : GCAGATCTTCTTTTGTCTTATGGATATGAAGATGATCTGAAAGCTCTTACATCTCATGTACCAAGACGTTGCCAGTGCCTTCTGATGTCTGCAACCTCAAG : TTCTGACGTTGAAAAGCTGAAGAAGCTTATTTTACACAATCCCTACATCCTGACTTTGCCTGAGGTGGGAGAAACAAAGGATGACATTATCCCAAAAAATGTACAGCAATTTTAT : ATTTCTTGTGCTGCTCGTGATAAGCTTGTCCATGTCCTTGCCCTCTTGAAGCTTGAGTTGGTCCAGAAAAAAGTCTTGATATTTACAAATTCAATTGACACGAGTTTTAGACTCAAACTATTCTTTGAGCAG : TTTGGGATCAAGTCTGCAGTTTTAAATGCCGAGCTGCCTCAGAGTTCTCGTCTACACATCCTTGAG : GAATTTAATGCTGGGCTATTTGATTACTTGATTGCGACTGATGAAAGTCAATCAGAAGGAAAGGAAAAAGTTGATGATCAAAATGGCAGTGAGCGAAAAAAATCAAAAAAACATCGAAAGCATAAATTGGATGCAGAGTTTGGTGTAGTCAGAGGGATAGACTTCAAAAATGTGCATACG : GTGATAAATTATGAGATGCCTCAAACAGCTGCAGGCTATGTACATCGAATTGGACGTACTGGAAGAGCATATAATACTGGAGCATCTGTCTCTCTT : GTCTCTGATGAAGAGACAGAAATATTTGAAGAGATTAAATCTTTACTGGGGGAAAATGAAGACAAGGTGTCACAGTTTATTGCTCCATTCCCATTGCTGAGTAAAAATGCAGTAGAGTCTTTGCGTTACCGAGCTGAG : GATGTTGGAAGGAGTATTACAAAAATTGCAGTAAGAGAATCACGGGCTCAGGATCTGAGGAATGAAATTCTTAATTCTCAAAA : ATTGAAGGCTCATTTTCAAGATAATCCAAAAGACTTAG : ATCTTCTGAAGCATGATAAGATGTTAAGCAAGAAAGCACCTGCCGCTCACCTACGTGATGTACCTGACTACCTATTAGATCCAACGACACAAGAAGCTAGCAAGATTGTGAAGCTGGCCAGAGCTGCAATGGGCAATACTAATCCATCTCGTGGCAAAGGATCAAAGGGAAGGTTCAAAAGAAGCAGAGACCCTCTTAAAACATTTTCAGCTGAG : GCACCTAAGCGAGCAGGGAAAGGCGGGATGAAAAGAAAGGTAAAAGATACCGATAATGGCCATTAACATTAAAAGGAACACCCTGCCTAGTTGTTTGATACAAGGAATTGTAGTTTATACGAAATTTGAATTATATTTATCAATCAATTTTTTTTGAATGCTTTCACTAACCCTAGTCCCAG</gDNA_template>
            <first_frame> *  G  Q  R  V  *  K  V  S  S  R  A  *  V  I  P  *  T  L  C  V  V  V  F  P  Q  N  P  K  P  S  R  T  R  E  *  T  E  K  E  E  L  R  L  R  K  M  K  N  K  P  S  K  N  W  D  L  T  L  V  *  S  V  L  *  P  R  K  L  S  I  N  Q  L  L  F  S  E  L  L  F  L  *  S  S :   K  G  K  M  W  L  L  E  L  R  L  V  L  E  R  H  L  L  I  S  F  L  Y  F  T  S  F  L  L  S  H  L  Q  Q  R  I  L  L  L  L  R  *  F  L  Y  L  Q  G  N  C  V  N  R :   F  V  R  R  R  I  R  *  L  N  Y  V  E  C  N  *  G  L  S  N  *  Q  V  L  C  L  F  L  N  * :   E  L  H  W  R  G  L  R  R  S  L  Y  L  L  L  L  V  Y  R  H  A  C  Q  M  E  L  F  K  G  K  L  F  K  I  L  C  P  F  S  F  S  M  R :   Q  I  F  F  C  L  M  D  M  K  M  I  *  K  L  L  H  L  M  Y  Q  D  V  A  S  A  F  *  C  L  Q  P  Q   : V  L  T  L  K  S  *  R  S  L  F  Y  T  I  P  T  S  *  L  C  L  R  W  E  K  Q  R  M  T  L  S  Q  K  M  Y  S  N  F  I :   F  L  V  L  L  V  I  S  L  S  M  S  L  P  S  *  S  L  S  W  S  R  K  K  S  *  Y  L  Q  I  Q  L  T  R  V  L  D  S  N  Y  S  L  S  S :   L  G  S  S  L  Q  F  *  M  P  S  C  L  R  V  L  V  Y  T  S  L  R :   N  L  M  L  G  Y  L  I  T  *  L  R  L  M  K  V  N  Q  K  E  R  K  K  L  M  I  K  M  A  V  S  E  K  N  Q  K  N  I  E  S  I  N  W  M  Q  S  L  V  *  S  E  G  *  T  S  K  M  C  I  R :   *  *  I  M  R  C  L  K  Q  L  Q  A  M  Y  I  E  L  D  V  L  E  E  H  I  I  L  E  H  L  S  L  L :   S  L  M  K  R  Q  K  Y  L  K  R  L  N  L  Y  W  G  K  M  K  T  R  C  H  S  L  L  L  H  S  H  C  *  V  K  M  Q  *  S  L  C  V  T  E  L  R :   M  L  E  G  V  L  Q  K  L  Q  *  E  N  H  G  L  R  I  *  G  M  K  F  L  I  L  K   : N  *  R  L  I  F  K  I  I  Q  K  T  *  :  I  F  *  S  M  I  R  C  *  A  R  K  H  L  P  L  T  Y  V  M  Y  L  T  T  Y  *  I  Q  R  H  K  K  L  A  R  L  *  S  W  P  E  L  Q  W  A  I  L  I  H  L  V  A  K  D  Q  R  E  G  S  K  E  A  E  T  L  L  K  H  F  Q  L  R :   H  L  S  E  Q  G  K  A  G  *  K  E  R  *  K  I  P  I  M  A  I  N  I  K  R  N  T  L  P  S  C  L  I  Q  G  I  V  V  Y  T  K  F  E  L  Y  L  S  I  N  F  F  *  M  L  S  L  T  L  V  P  </first_frame>
            <second_frame>  E  A  R  G  Y  E  K  L  V  A  A  L  R  L  F  L  K  P  F  V  *  *  S  S  P  K  T  Q  N  P  R  V  P  E  N  E  Q  R  R  K  S  *  D  *  G  R  *  R  T  N  L  R  R  I  G  T  *  P  S  S  N  P  C  F  N  Q  E  N  Y  R  *  T  N  S  Y  S  A  S  C  Y  S  S  N  P   : R  R  E  R  C  G  C  S  S  *  D  W  F  W  K  D  I  C  L  S  P  S  F  T  S  Q  A  F  Y  S  V  I  F  N  K  E  S  C  S  Y  C  V  D  S  C  T  Y  K  G  I  V  S  T   : G  L  F  G  G  E  F  V  D  *  T  M  *  S  A  I  K  A  C  P  I  D  K  F  Y  V  C  F  *  I   : E  N  Y  I  G  G  A  S  G  D  R  Y  I  Y  S  C  L  Y  T  D  M  L  V  K  W  S  Y  S  R  E  S  C  S  R  F  S  V  H  S  H  S  R  *   : G  R  S  S  F  V  L  W  I  *  R  *  S  E  S  S  Y  I  S  C  T  K  T  L  P  V  P  S  D  V  C  N  L  K  :  F  *  R  *  K  A  E  E  A  Y  F  T  Q  S  L  H  P  D  F  A  *  G  G  R  N  K  G  *  H  Y  P  K  K  C  T  A  I  L   : Y  F  L  C  C  S  *  *  A  C  P  C  P  C  P  L  E  A  *  V  G  P  E  K  S  L  D  I  Y  K  F  N  *  H  E  F  *  T  Q  T  I  L  *  A   : V  W  D  Q  V  C  S  F  K  C  R  A  A  S  E  F  S  S  T  H  P  *   : G  I  *  C  W  A  I  *  L  L  D  C  D  *  *  K  S  I  R  R  K  G  K  S  *  *  S  K  W  Q  *  A  K  K  I  K  K  T  S  K  A  *  I  G  C  R  V  W  C  S  Q  R  D  R  L  Q  K  C  A  Y   : G  D  K  L  *  D  A  S  N  S  C  R  L  C  T  S  N  W  T  Y  W  K  S  I  *  Y  W  S  I  C  L  S   : C  L  *  *  R  D  R  N  I  *  R  D  *  I  F  T  G  G  K  *  R  Q  G  V  T  V  Y  C  S  I  P  I  A  E  *  K  C  S  R  V  F  A  L  P  S  *   : G  C  W  K  E  Y  Y  K  N  C  S  K  R  I  T  G  S  G  S  E  E  *  N  S  *  F  S  K  :  I  E  G  S  F  S  R  *  S  K  R  L  R :   S  S  E  A  *  *  D  V  K  Q  E  S  T  C  R  S  P  T  *  C  T  *  L  P  I  R  S  N  D  T  R  S  *  Q  D  C  E  A  G  Q  S  C  N  G  Q  Y  *  S  I  S  W  Q  R  I  K  G  K  V  Q  K  K  Q  R  P  S  *  N  I  F  S  *   : G  T  *  A  S  R  E  R  R  D  E  K  K  G  K  R  Y  R  *  W  P  L  T  L  K  G  T  P  C  L  V  V  *  Y  K  E  L  *  F  I  R  N  L  N  Y  I  Y  Q  S  I  F  F  E  C  F  H  *  P  *  S  Q </second_frame>
            <third_frame>   R  P  E  G  M  K  S  *  *  P  R  L  G  Y  S  L  N  P  L  C  S  S  L  P  P  K  P  K  T  L  A  Y  Q  R  M  N  R  E  G  R  V  E  I  E  E  D  E  E  Q  T  F  E  E  L  G  L  D  P  R  L  I  R  A  L  T  K  K  T  I  D  K  P  T  P  I  Q  R  V  A  I  P  L  I  L  :  E  G  K  D  V  V  A  R  A  K  T  G  S  G  K  T  F  A  Y  L  L  P  L  L  H  K  L  F  T  Q  S  S  S  T  K  N  L  A  P  T  A  L  I  L  V  P  T  R  E  L  C  Q  Q  :  V  C  S  E  A  N  S  L  I  E  L  C  R  V  Q  L  R  L  V  Q  L  T  S  S  M  S  V  S  E  L  :  R  T  T  L  A  G  P  P  E  I  V  I  S  T  P  A  C  I  Q  T  C  L  S  N  G  V  I  Q  G  K  A  V  Q  D  S  L  S  I  L  I  L  D  E  :  A  D  L  L  L  S  Y  G  Y  E  D  D  L  K  A  L  T  S  H  V  P  R  R  C  Q  C  L  L  M  S  A  T  S  S :   S  D  V  E  K  L  K  K  L  I  L  H  N  P  Y  I  L  T  L  P  E  V  G  E  T  K  D  D  I  I  P  K  N  V  Q  Q  F  Y  :  I  S  C  A  A  R  D  K  L  V  H  V  L  A  L  L  K  L  E  L  V  Q  K  K  V  L  I  F  T  N  S  I  D  T  S  F  R  L  K  L  F  F  E  Q  :  F  G  I  K  S  A  V  L  N  A  E  L  P  Q  S  S  R  L  H  I  L  E  :  E  F  N  A  G  L  F  D  Y  L  I  A  T  D  E  S  Q  S  E  G  K  E  K  V  D  D  Q  N  G  S  E  R  K  K  S  K  K  H  R  K  H  K  L  D  A  E  F  G  V  V  R  G  I  D  F  K  N  V  H  T  :  V  I  N  Y  E  M  P  Q  T  A  A  G  Y  V  H  R  I  G  R  T  G  R  A  Y  N  T  G  A  S  V  S  L  :  V  S  D  E  E  T  E  I  F  E  E  I  K  S  L  L  G  E  N  E  D  K  V  S  Q  F  I  A  P  F  P  L  L  S  K  N  A  V  E  S  L  R  Y  R  A  E  :  D  V  G  R  S  I  T  K  I  A  V  R  E  S  R  A  Q  D  L  R  N  E  I  L  N  S  Q  K :   L  K  A  H  F  Q  D  N  P  K  D  L   : D  L  L  K  H  D  K  M  L  S  K  K  A  P  A  A  H  L  R  D  V  P  D  Y  L  L  D  P  T  T  Q  E  A  S  K  I  V  K  L  A  R  A  A  M  G  N  T  N  P  S  R  G  K  G  S  K  G  R  F  K  R  S  R  D  P  L  K  T  F  S  A  E  :  A  P  K  R  A  G  K  G  G  M  K  R  K  V  K  D  T  D  N  G  H  *  H  *  K  E  H  P  A  *  L  F  D  T  R  N  C  S  L  Y  E  I  *  I  I  F  I  N  Q  F  F  L  N  A  F  T  N  P  S  P   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0064E19.2" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="42214" stop="42438"/>
                    <exon start="42521" stop="42679"/>
                    <exon start="42763" stop="42852"/>
                    <exon start="42952" stop="43080"/>
                    <exon start="43441" stop="43541"/>
                    <exon start="43734" stop="43848"/>
                    <exon start="44393" stop="44524"/>
                    <exon start="45380" stop="45445"/>
                    <exon start="45568" stop="45747"/>
                    <exon start="45928" stop="46023"/>
                    <exon start="46400" stop="46537"/>
                    <exon start="47183" stop="47265"/>
                    <exon start="47946" stop="47983"/>
                    <exon start="48060" stop="48274"/>
                    <exon start="48727" stop="48792"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1830</number_coding_nucleotides>
                  <number_encoded_amino_acids>610</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PRLGYSLNPLCSSLPPKPKTLAYQRMNREGRVEIEEDEEQTFEELGLDPRLIRALTKKTIDKPTPIQRVAIPLILEGKDVVARAKTGSGKTFAYLLPLLHKLFTQSSSTKNLAPTALILVPTRELCQQVCSEANSLIELCRVQLRLVQLTSSMSVSELRTTLAGPPEIVISTPACIQTCLSNGVIQGKAVQDSLSILILDEADLLLSYGYEDDLKALTSHVPRRCQCLLMSATSSSDVEKLKKLILHNPYILTLPEVGETKDDIIPKNVQQFYISCAARDKLVHVLALLKLELVQKKVLIFTNSIDTSFRLKLFFEQFGIKSAVLNAELPQSSRLHILEEFNAGLFDYLIATDESQSEGKEKVDDQNGSERKKSKKHRKHKLDAEFGVVRGIDFKNVHTVINYEMPQTAAGYVHRIGRTGRAYNTGASVSLVSDEETEIFEEIKSLLGENEDKVSQFIAPFPLLSKNAVESLRYRAEDVGRSITKIAVRESRAQDLRNEILNSQKLKAHFQDNPKDLDLLKHDKMLSKKAPAAHLRDVPDYLLDPTTQEASKIVKLARAAMGNTNPSRGKGSKGRFKRSRDPLKTFSAEAPKRAGKGGMKRKVKDTDNGH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="42237" e_stop="42438"/>
            <exon e_start="42521" e_stop="42852"/>
            <exon e_start="42952" e_stop="43080"/>
            <exon e_start="43441" e_stop="43541"/>
            <exon e_start="43734" e_stop="43848"/>
            <exon e_start="44393" e_stop="44524"/>
            <exon e_start="45380" e_stop="45445"/>
            <exon e_start="45568" e_stop="45747"/>
            <exon e_start="45928" e_stop="46023"/>
            <exon e_start="46400" e_stop="46537"/>
            <exon e_start="47183" e_stop="47265"/>
            <exon e_start="47946" e_stop="47983"/>
            <exon e_start="48060" e_stop="48274"/>
            <exon e_start="48727" e_stop="48908"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="0.990"/>
          <exon-intron don_prob="0.000" acc_prob="0.996" e_score="0.961"/>
          <exon-intron don_prob="0.997" acc_prob="0.771" e_score="0.961"/>
          <exon-intron don_prob="0.999" acc_prob="0.932" e_score="1.000"/>
          <exon-intron don_prob="0.833" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.896" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.896" acc_prob="0.971" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.865" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.990">
            <gDNA_exon_boundary e_start="42237" e_stop="42438" e_length="202"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="42439" i_stop="42520" i_length="82"/>
          </intron>
          <exon e_serial="2" e_score="0.961">
            <gDNA_exon_boundary e_start="42521" e_stop="42852" e_length="332"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.996">
            <gDNA_intron_boundary i_start="42853" i_stop="42951" i_length="99"/>
          </intron>
          <exon e_serial="3" e_score="0.961">
            <gDNA_exon_boundary e_start="42952" e_stop="43080" e_length="129"/>
          </exon>
          <intron i_serial="3" don_prob="0.997" acc_prob="0.771">
            <gDNA_intron_boundary i_start="43081" i_stop="43440" i_length="360"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="43441" e_stop="43541" e_length="101"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="0.932">
            <gDNA_intron_boundary i_start="43542" i_stop="43733" i_length="192"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="43734" e_stop="43848" e_length="115"/>
          </exon>
          <intron i_serial="5" don_prob="0.833" acc_prob="0.996">
            <gDNA_intron_boundary i_start="43849" i_stop="44392" i_length="544"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="44393" e_stop="44524" e_length="132"/>
          </exon>
          <intron i_serial="6" don_prob="0.896" acc_prob="0.995">
            <gDNA_intron_boundary i_start="44525" i_stop="45379" i_length="855"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="45380" e_stop="45445" e_length="66"/>
          </exon>
          <intron i_serial="7" don_prob="0.896" acc_prob="0.971">
            <gDNA_intron_boundary i_start="45446" i_stop="45567" i_length="122"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="45568" e_stop="45747" e_length="180"/>
          </exon>
          <intron i_serial="8" don_prob="0.991" acc_prob="0.999">
            <gDNA_intron_boundary i_start="45748" i_stop="45927" i_length="180"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="45928" e_stop="46023" e_length="96"/>
          </exon>
          <intron i_serial="9" don_prob="0.865" acc_prob="1.000">
            <gDNA_intron_boundary i_start="46024" i_stop="46399" i_length="376"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="46400" e_stop="46537" e_length="138"/>
          </exon>
          <intron i_serial="10" don_prob="0.999" acc_prob="0.998">
            <gDNA_intron_boundary i_start="46538" i_stop="47182" i_length="645"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="47183" e_stop="47265" e_length="83"/>
          </exon>
          <intron i_serial="11" don_prob="0.999" acc_prob="0.996">
            <gDNA_intron_boundary i_start="47266" i_stop="47945" i_length="680"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="47946" e_stop="47983" e_length="38"/>
          </exon>
          <intron i_serial="12" don_prob="0.000" acc_prob="0.987">
            <gDNA_intron_boundary i_start="47984" i_stop="48059" i_length="76"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="48060" e_stop="48274" e_length="215"/>
          </exon>
          <intron i_serial="13" don_prob="0.995" acc_prob="0.999">
            <gDNA_intron_boundary i_start="48275" i_stop="48726" i_length="452"/>
          </intron>
          <exon e_serial="14" e_score="0.994">
            <gDNA_exon_boundary e_start="48727" e_stop="48908" e_length="182"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42237" stop="42438"/>
              <exon start="42521" stop="42645"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E365610" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42258" stop="42438"/>
              <exon start="42521" stop="42852"/>
              <exon start="42952" stop="43080"/>
              <exon start="43441" stop="43503"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E481468" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42258" stop="42438"/>
              <exon start="42521" stop="42852"/>
              <exon start="42952" stop="43080"/>
              <exon start="43441" stop="43477"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E428940" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43482" stop="43541"/>
              <exon start="43734" stop="43848"/>
              <exon start="44393" stop="44524"/>
              <exon start="45380" stop="45445"/>
              <exon start="45568" stop="45671"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E372672" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43483" stop="43541"/>
              <exon start="43734" stop="43848"/>
              <exon start="44393" stop="44524"/>
              <exon start="45380" stop="45445"/>
              <exon start="45568" stop="45672"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290635" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43483" stop="43541"/>
              <exon start="43734" stop="43848"/>
              <exon start="44393" stop="44524"/>
              <exon start="45380" stop="45445"/>
              <exon start="45568" stop="45672"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E372673" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44417" stop="44524"/>
              <exon start="45380" stop="45445"/>
              <exon start="45568" stop="45747"/>
              <exon start="45928" stop="46023"/>
              <exon start="46400" stop="46537"/>
              <exon start="47183" stop="47265"/>
              <exon start="47946" stop="47983"/>
              <exon start="48060" stop="48200"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E705239" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45597" stop="45747"/>
              <exon start="45928" stop="46023"/>
              <exon start="46400" stop="46537"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E405144" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46417" stop="46537"/>
              <exon start="47183" stop="47265"/>
              <exon start="47946" stop="47983"/>
              <exon start="48060" stop="48274"/>
              <exon start="48727" stop="48908"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E428941" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47244" stop="47265"/>
              <exon start="47946" stop="47983"/>
              <exon start="48060" stop="48274"/>
              <exon start="48727" stop="48892"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228766" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47946" stop="47983"/>
              <exon start="48060" stop="48274"/>
              <exon start="48727" stop="48892"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E229054" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CCCTTTGTGTAGTAGTCTTCCCCCAAAACCCAAAACCCTCGCGTACCAGAGAATGAACAGAGAAGGAAGAGTTGAGATTGAGGAAGATGAAGAACAAACCTTCGAAGAATTGGGACTTGACCCTCGTCTAATCCGTGCTTTAACCAAGAAAACTATCGATAAACCAACTCCTATTCAGCGAGTTGCTATTCCTCTAATCCTC : GAAGGGAAAGATGTGGTTGCTCGAGCTAAGACTGGTTCTGGAAAGACATTTGCTTATCTCCTTCCTTTACTTCACAAGCTTTTTACTCAGTCATCTTCAACAAAGAATCTTGCTCCTACTGCGTTGATTCTTGTACCTACAAGGGAATTGTGTCAACAGGTTGAAACTTTTTGCTATTATTTTGGGGTTTTATTTTGTTTTGAGTTTGTGGGTTTATTTTAATTGTGTTTGTTGTTGTTCAGGTTTGTTCGGAGGCGAATTCGTTGATTGAACTATGTAGAGTGCAATTAAGGCTTGTCCAATTGACAAGTTCTATGTCTGTTTCTGAATTG : AGAACTACATTGGCGGGGCCTCCGGAGATCGTTATATCTACTCCTGCTTGTATACAGACATGCTTGTCAAATGGAGTTATTCAAGGGAAAGCTGTTCAAGATTCTCTGTCCATTCTCATTCTCGATGAG : GCAGATCTTCTTTTGTCTTATGGATATGAAGATGATCTGAAAGCTCTTACATCTCATGTACCAAGACGTTGCCAGTGCCTTCTGATGTCTGCAACCTCAAG : TTCTGACGTTGAAAAGCTGAAGAAGCTTATTTTACACAATCCCTACATCCTGACTTTGCCTGAGGTGGGAGAAACAAAGGATGACATTATCCCAAAAAATGTACAGCAATTTTAT : ATTTCTTGTGCTGCTCGTGATAAGCTTGTCCATGTCCTTGCCCTCTTGAAGCTTGAGTTGGTCCAGAAAAAAGTCTTGATATTTACAAATTCAATTGACACGAGTTTTAGACTCAAACTATTCTTTGAGCAG : TTTGGGATCAAGTCTGCAGTTTTAAATGCCGAGCTGCCTCAGAGTTCTCGTCTACACATCCTTGAG : GAATTTAATGCTGGGCTATTTGATTACTTGATTGCGACTGATGAAAGTCAATCAGAAGGAAAGGAAAAAGTTGATGATCAAAATGGCAGTGAGCGAAAAAAATCAAAAAAACATCGAAAGCATAAATTGGATGCAGAGTTTGGTGTAGTCAGAGGGATAGACTTCAAAAATGTGCATACG : GTGATAAATTATGAGATGCCTCAAACAGCTGCAGGCTATGTACATCGAATTGGACGTACTGGAAGAGCATATAATACTGGAGCATCTGTCTCTCTT : GTCTCTGATGAAGAGACAGAAATATTTGAAGAGATTAAATCTTTACTGGGGGAAAATGAAGACAAGGTGTCACAGTTTATTGCTCCATTCCCATTGCTGAGTAAAAATGCAGTAGAGTCTTTGCGTTACCGAGCTGAG : GATGTTGGAAGGAGTATTACAAAAATTGCAGTAAGAGAATCACGGGCTCAGGATCTGAGGAATGAAATTCTTAATTCTCAAAA : ATTGAAGGCTCATTTTCAAGATAATCCAAAAGACTTAG : ATCTTCTGAAGCATGATAAGATGTTAAGCAAGAAAGCACCTGCCGCTCACCTACGTGATGTACCTGACTACCTATTAGATCCAACGACACAAGAAGCTAGCAAGATTGTGAAGCTGGCCAGAGCTGCAATGGGCAATACTAATCCATCTCGTGGCAAAGGATCAAAGGGAAGGTTCAAAAGAAGCAGAGACCCTCTTAAAACATTTTCAGCTGAG : GCACCTAAGCGAGCAGGGAAAGGCGGGATGAAAAGAAAGGTAAAAGATACCGATAATGGCCATTAACATTAAAAGGAACACCCTGCCTAGTTGTTTGATACAAGGAATTGTAGTTTATACGAAATTTGAATTATATTTATCAATCAATTTTTTTTGAATGCTTTCACTAACCCTAGTCCCAG</gDNA_template>
            <first_frame> P  F  V  *  *  S  S  P  K  T  Q  N  P  R  V  P  E  N  E  Q  R  R  K  S  *  D  *  G  R  *  R  T  N  L  R  R  I  G  T  *  P  S  S  N  P  C  F  N  Q  E  N  Y  R  *  T  N  S  Y  S  A  S  C  Y  S  S  N  P   : R  R  E  R  C  G  C  S  S  *  D  W  F  W  K  D  I  C  L  S  P  S  F  T  S  Q  A  F  Y  S  V  I  F  N  K  E  S  C  S  Y  C  V  D  S  C  T  Y  K  G  I  V  S  T  G  *  N  F  L  L  L  F  W  G  F  I  L  F  *  V  C  G  F  I  L  I  V  F  V  V  V  Q  V  C  S  E  A  N  S  L  I  E  L  C  R  V  Q  L  R  L  V  Q  L  T  S  S  M  S  V  S  E  L  :  R  T  T  L  A  G  P  P  E  I  V  I  S  T  P  A  C  I  Q  T  C  L  S  N  G  V  I  Q  G  K  A  V  Q  D  S  L  S  I  L  I  L  D  E  :  A  D  L  L  L  S  Y  G  Y  E  D  D  L  K  A  L  T  S  H  V  P  R  R  C  Q  C  L  L  M  S  A  T  S  S :   S  D  V  E  K  L  K  K  L  I  L  H  N  P  Y  I  L  T  L  P  E  V  G  E  T  K  D  D  I  I  P  K  N  V  Q  Q  F  Y  :  I  S  C  A  A  R  D  K  L  V  H  V  L  A  L  L  K  L  E  L  V  Q  K  K  V  L  I  F  T  N  S  I  D  T  S  F  R  L  K  L  F  F  E  Q  :  F  G  I  K  S  A  V  L  N  A  E  L  P  Q  S  S  R  L  H  I  L  E  :  E  F  N  A  G  L  F  D  Y  L  I  A  T  D  E  S  Q  S  E  G  K  E  K  V  D  D  Q  N  G  S  E  R  K  K  S  K  K  H  R  K  H  K  L  D  A  E  F  G  V  V  R  G  I  D  F  K  N  V  H  T  :  V  I  N  Y  E  M  P  Q  T  A  A  G  Y  V  H  R  I  G  R  T  G  R  A  Y  N  T  G  A  S  V  S  L  :  V  S  D  E  E  T  E  I  F  E  E  I  K  S  L  L  G  E  N  E  D  K  V  S  Q  F  I  A  P  F  P  L  L  S  K  N  A  V  E  S  L  R  Y  R  A  E  :  D  V  G  R  S  I  T  K  I  A  V  R  E  S  R  A  Q  D  L  R  N  E  I  L  N  S  Q  K :   L  K  A  H  F  Q  D  N  P  K  D  L   : D  L  L  K  H  D  K  M  L  S  K  K  A  P  A  A  H  L  R  D  V  P  D  Y  L  L  D  P  T  T  Q  E  A  S  K  I  V  K  L  A  R  A  A  M  G  N  T  N  P  S  R  G  K  G  S  K  G  R  F  K  R  S  R  D  P  L  K  T  F  S  A  E  :  A  P  K  R  A  G  K  G  G  M  K  R  K  V  K  D  T  D  N  G  H  *  H  *  K  E  H  P  A  *  L  F  D  T  R  N  C  S  L  Y  E  I  *  I  I  F  I  N  Q  F  F  L  N  A  F  T  N  P  S  P   </first_frame>
            <second_frame>  P  L  C  S  S  L  P  P  K  P  K  T  L  A  Y  Q  R  M  N  R  E  G  R  V  E  I  E  E  D  E  E  Q  T  F  E  E  L  G  L  D  P  R  L  I  R  A  L  T  K  K  T  I  D  K  P  T  P  I  Q  R  V  A  I  P  L  I  L  :  E  G  K  D  V  V  A  R  A  K  T  G  S  G  K  T  F  A  Y  L  L  P  L  L  H  K  L  F  T  Q  S  S  S  T  K  N  L  A  P  T  A  L  I  L  V  P  T  R  E  L  C  Q  Q  V  E  T  F  C  Y  Y  F  G  V  L  F  C  F  E  F  V  G  L  F  *  L  C  L  L  L  F  R  F  V  R  R  R  I  R  *  L  N  Y  V  E  C  N  *  G  L  S  N  *  Q  V  L  C  L  F  L  N  * :   E  L  H  W  R  G  L  R  R  S  L  Y  L  L  L  L  V  Y  R  H  A  C  Q  M  E  L  F  K  G  K  L  F  K  I  L  C  P  F  S  F  S  M  R :   Q  I  F  F  C  L  M  D  M  K  M  I  *  K  L  L  H  L  M  Y  Q  D  V  A  S  A  F  *  C  L  Q  P  Q   : V  L  T  L  K  S  *  R  S  L  F  Y  T  I  P  T  S  *  L  C  L  R  W  E  K  Q  R  M  T  L  S  Q  K  M  Y  S  N  F  I :   F  L  V  L  L  V  I  S  L  S  M  S  L  P  S  *  S  L  S  W  S  R  K  K  S  *  Y  L  Q  I  Q  L  T  R  V  L  D  S  N  Y  S  L  S  S :   L  G  S  S  L  Q  F  *  M  P  S  C  L  R  V  L  V  Y  T  S  L  R :   N  L  M  L  G  Y  L  I  T  *  L  R  L  M  K  V  N  Q  K  E  R  K  K  L  M  I  K  M  A  V  S  E  K  N  Q  K  N  I  E  S  I  N  W  M  Q  S  L  V  *  S  E  G  *  T  S  K  M  C  I  R :   *  *  I  M  R  C  L  K  Q  L  Q  A  M  Y  I  E  L  D  V  L  E  E  H  I  I  L  E  H  L  S  L  L :   S  L  M  K  R  Q  K  Y  L  K  R  L  N  L  Y  W  G  K  M  K  T  R  C  H  S  L  L  L  H  S  H  C  *  V  K  M  Q  *  S  L  C  V  T  E  L  R :   M  L  E  G  V  L  Q  K  L  Q  *  E  N  H  G  L  R  I  *  G  M  K  F  L  I  L  K   : N  *  R  L  I  F  K  I  I  Q  K  T  *  :  I  F  *  S  M  I  R  C  *  A  R  K  H  L  P  L  T  Y  V  M  Y  L  T  T  Y  *  I  Q  R  H  K  K  L  A  R  L  *  S  W  P  E  L  Q  W  A  I  L  I  H  L  V  A  K  D  Q  R  E  G  S  K  E  A  E  T  L  L  K  H  F  Q  L  R :   H  L  S  E  Q  G  K  A  G  *  K  E  R  *  K  I  P  I  M  A  I  N  I  K  R  N  T  L  P  S  C  L  I  Q  G  I  V  V  Y  T  K  F  E  L  Y  L  S  I  N  F  F  *  M  L  S  L  T  L  V  P  </second_frame>
            <third_frame>   L  C  V  V  V  F  P  Q  N  P  K  P  S  R  T  R  E  *  T  E  K  E  E  L  R  L  R  K  M  K  N  K  P  S  K  N  W  D  L  T  L  V  *  S  V  L  *  P  R  K  L  S  I  N  Q  L  L  F  S  E  L  L  F  L  *  S  S :   K  G  K  M  W  L  L  E  L  R  L  V  L  E  R  H  L  L  I  S  F  L  Y  F  T  S  F  L  L  S  H  L  Q  Q  R  I  L  L  L  L  R  *  F  L  Y  L  Q  G  N  C  V  N  R  L  K  L  F  A  I  I  L  G  F  Y  F  V  L  S  L  W  V  Y  F  N  C  V  C  C  C  S  G  L  F  G  G  E  F  V  D  *  T  M  *  S  A  I  K  A  C  P  I  D  K  F  Y  V  C  F  *  I   : E  N  Y  I  G  G  A  S  G  D  R  Y  I  Y  S  C  L  Y  T  D  M  L  V  K  W  S  Y  S  R  E  S  C  S  R  F  S  V  H  S  H  S  R  *   : G  R  S  S  F  V  L  W  I  *  R  *  S  E  S  S  Y  I  S  C  T  K  T  L  P  V  P  S  D  V  C  N  L  K  :  F  *  R  *  K  A  E  E  A  Y  F  T  Q  S  L  H  P  D  F  A  *  G  G  R  N  K  G  *  H  Y  P  K  K  C  T  A  I  L   : Y  F  L  C  C  S  *  *  A  C  P  C  P  C  P  L  E  A  *  V  G  P  E  K  S  L  D  I  Y  K  F  N  *  H  E  F  *  T  Q  T  I  L  *  A   : V  W  D  Q  V  C  S  F  K  C  R  A  A  S  E  F  S  S  T  H  P  *   : G  I  *  C  W  A  I  *  L  L  D  C  D  *  *  K  S  I  R  R  K  G  K  S  *  *  S  K  W  Q  *  A  K  K  I  K  K  T  S  K  A  *  I  G  C  R  V  W  C  S  Q  R  D  R  L  Q  K  C  A  Y   : G  D  K  L  *  D  A  S  N  S  C  R  L  C  T  S  N  W  T  Y  W  K  S  I  *  Y  W  S  I  C  L  S   : C  L  *  *  R  D  R  N  I  *  R  D  *  I  F  T  G  G  K  *  R  Q  G  V  T  V  Y  C  S  I  P  I  A  E  *  K  C  S  R  V  F  A  L  P  S  *   : G  C  W  K  E  Y  Y  K  N  C  S  K  R  I  T  G  S  G  S  E  E  *  N  S  *  F  S  K  :  I  E  G  S  F  S  R  *  S  K  R  L  R :   S  S  E  A  *  *  D  V  K  Q  E  S  T  C  R  S  P  T  *  C  T  *  L  P  I  R  S  N  D  T  R  S  *  Q  D  C  E  A  G  Q  S  C  N  G  Q  Y  *  S  I  S  W  Q  R  I  K  G  K  V  Q  K  K  Q  R  P  S  *  N  I  F  S  *   : G  T  *  A  S  R  E  R  R  D  E  K  K  G  K  R  Y  R  *  W  P  L  T  L  K  G  T  P  C  L  V  V  *  Y  K  E  L  *  F  I  R  N  L  N  Y  I  Y  Q  S  I  F  F  E  C  F  H  *  P  *  S  Q </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0064E19.2" strand="+"/>
                <serials PGL_serial="7" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="42724" stop="42852"/>
                    <exon start="42952" stop="43080"/>
                    <exon start="43441" stop="43541"/>
                    <exon start="43734" stop="43848"/>
                    <exon start="44393" stop="44524"/>
                    <exon start="45380" stop="45445"/>
                    <exon start="45568" stop="45747"/>
                    <exon start="45928" stop="46023"/>
                    <exon start="46400" stop="46537"/>
                    <exon start="47183" stop="47265"/>
                    <exon start="47946" stop="47983"/>
                    <exon start="48060" stop="48274"/>
                    <exon start="48727" stop="48792"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1485</number_coding_nucleotides>
                  <number_encoded_amino_acids>495</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VCGFILIVFVVVQVCSEANSLIELCRVQLRLVQLTSSMSVSELRTTLAGPPEIVISTPACIQTCLSNGVIQGKAVQDSLSILILDEADLLLSYGYEDDLKALTSHVPRRCQCLLMSATSSSDVEKLKKLILHNPYILTLPEVGETKDDIIPKNVQQFYISCAARDKLVHVLALLKLELVQKKVLIFTNSIDTSFRLKLFFEQFGIKSAVLNAELPQSSRLHILEEFNAGLFDYLIATDESQSEGKEKVDDQNGSERKKSKKHRKHKLDAEFGVVRGIDFKNVHTVINYEMPQTAAGYVHRIGRTGRAYNTGASVSLVSDEETEIFEEIKSLLGENEDKVSQFIAPFPLLSKNAVESLRYRAEDVGRSITKIAVRESRAQDLRNEILNSQKLKAHFQDNPKDLDLLKHDKMLSKKAPAAHLRDVPDYLLDPTTQEASKIVKLARAAMGNTNPSRGKGSKGRFKRSRDPLKTFSAEAPKRAGKGGMKRKVKDTDNGH*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0064E19.2" strand="+"/>
                <serials PGL_serial="7" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="42238" stop="42438"/>
                    <exon start="42521" stop="42742"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>420</number_coding_nucleotides>
                  <number_encoded_amino_acids>140</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PLCSSLPPKPKTLAYQRMNREGRVEIEEDEEQTFEELGLDPRLIRALTKKTIDKPTPIQRVAIPLILEGKDVVARAKTGSGKTFAYLLPLLHKLFTQSSSTKNLAPTALILVPTRELCQQVETFCYYFGVLFCFEFVGLF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="47866" e_stop="48274"/>
            <exon e_start="48727" e_stop="48880"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.999" e_score="0.949"/>
          <exon-only e_score="0.896"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.949">
            <gDNA_exon_boundary e_start="47866" e_stop="48274" e_length="409"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.999">
            <gDNA_intron_boundary i_start="48275" i_stop="48726" i_length="452"/>
          </intron>
          <exon e_serial="2" e_score="0.896">
            <gDNA_exon_boundary e_start="48727" e_stop="48880" e_length="154"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47866" stop="48274"/>
              <exon start="48727" stop="48880"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E609740" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTATATTTTTCAATGATTGTATTTTGCTGTGCTTGACTTGTAATCTGTATTAACTACTTCTTCCGCTTGTATTATCCAGATTGAAGGCTCATTTTCAAGATAATCCAAAAGACTTAGGTAATTAGGCTGTAGTTTGTGGGATGTACTTTGAGTGAACATAGTAGGTCTCATTATATTCAAATGTTCTGGGCAGATCTTCTGAAGCATGATAAGATGTTAAGCAAGAAAGCACCTGCCGCTCACCTACGTGATGTACCTGACTACCTATTAGATCCAACGACACAAGAAGCTAGCAAGATTGTGAAGCTGGCCAGAGCTGCAATGGGCAATACTAATCCATCTCGTGGCAAAGGATCAAAGGGAAGGTTCAAAAGAAGCAGAGACCCTCTTAAAACATTTTCAGCTGAG : GCACCTAAGCGAGCAGGGAAAGGCGGGATGAAAAGAAAGGTAAAAGATACCGATAATGGCCATTAACATTAAAAGGAACACCCTGCCTAGTTGTTTGATACAAGGAATTGTAGTTTATACGAAATTTGAATTATATTTATCAATCAATTTTTTT</gDNA_template>
            <first_frame> F  I  F  F  N  D  C  I  L  L  C  L  T  C  N  L  Y  *  L  L  L  P  L  V  L  S  R  L  K  A  H  F  Q  D  N  P  K  D  L  G  N  *  A  V  V  C  G  M  Y  F  E  *  T  *  *  V  S  L  Y  S  N  V  L  G  R  S  S  E  A  *  *  D  V  K  Q  E  S  T  C  R  S  P  T  *  C  T  *  L  P  I  R  S  N  D  T  R  S  *  Q  D  C  E  A  G  Q  S  C  N  G  Q  Y  *  S  I  S  W  Q  R  I  K  G  K  V  Q  K  K  Q  R  P  S  *  N  I  F  S  *   : G  T  *  A  S  R  E  R  R  D  E  K  K  G  K  R  Y  R  *  W  P  L  T  L  K  G  T  P  C  L  V  V  *  Y  K  E  L  *  F  I  R  N  L  N  Y  I  Y  Q  S  I  F   </first_frame>
            <second_frame>  L  Y  F  S  M  I  V  F  C  C  A  *  L  V  I  C  I  N  Y  F  F  R  L  Y  Y  P  D  *  R  L  I  F  K  I  I  Q  K  T  *  V  I  R  L  *  F  V  G  C  T  L  S  E  H  S  R  S  H  Y  I  Q  M  F  W  A  D  L  L  K  H  D  K  M  L  S  K  K  A  P  A  A  H  L  R  D  V  P  D  Y  L  L  D  P  T  T  Q  E  A  S  K  I  V  K  L  A  R  A  A  M  G  N  T  N  P  S  R  G  K  G  S  K  G  R  F  K  R  S  R  D  P  L  K  T  F  S  A  E  :  A  P  K  R  A  G  K  G  G  M  K  R  K  V  K  D  T  D  N  G  H  *  H  *  K  E  H  P  A  *  L  F  D  T  R  N  C  S  L  Y  E  I  *  I  I  F  I  N  Q  F  F  </second_frame>
            <third_frame>   Y  I  F  Q  *  L  Y  F  A  V  L  D  L  *  S  V  L  T  T  S  S  A  C  I  I  Q  I  E  G  S  F  S  R  *  S  K  R  L  R  *  L  G  C  S  L  W  D  V  L  *  V  N  I  V  G  L  I  I  F  K  C  S  G  Q  I  F  *  S  M  I  R  C  *  A  R  K  H  L  P  L  T  Y  V  M  Y  L  T  T  Y  *  I  Q  R  H  K  K  L  A  R  L  *  S  W  P  E  L  Q  W  A  I  L  I  H  L  V  A  K  D  Q  R  E  G  S  K  E  A  E  T  L  L  K  H  F  Q  L  R :   H  L  S  E  Q  G  K  A  G  *  K  E  R  *  K  I  P  I  M  A  I  N  I  K  R  N  T  L  P  S  C  L  I  Q  G  I  V  V  Y  T  K  F  E  L  Y  L  S  I  N  F  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0064E19.2" strand="+"/>
                <serials PGL_serial="7" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="47999" stop="48274"/>
                    <exon start="48727" stop="48792"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>339</number_coding_nucleotides>
                  <number_encoded_amino_acids>113</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FVGCTLSEHSRSHYIQMFWADLLKHDKMLSKKAPAAHLRDVPDYLLDPTTQEASKIVKLARAAMGNTNPSRGKGSKGRFKRSRDPLKTFSAEAPKRAGKGGMKRKVKDTDNGH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="51022" PGL_stop="50438"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="51022" e_stop="50438"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.961"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.961">
            <gDNA_exon_boundary e_start="51022" e_stop="50438" e_length="585"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51022" stop="50438"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549300" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATAAATGGTCTTGAAGGTATATGGAAACTATTCAACCAAGTAGGCGAAAACTCGGCTGAATTACAATTAAGTCCCTATGGAGGAAAGTTGAGTGAGATATCGGAATCTGAAACACCTTTCCCTCATAGAGATGGAAACATATTCATGATCCATTATGGGGTGAATTGGGGTGAAATGGAAAGTTCTAATAAGCATATATCTTGGATTCGAAACCTTTATGGATACATGGCTAGGTATGTGTCAAGATCTCCTAGAGCTGCTTATTTGAACTATAGAGATCTTGATTTAGGAGTGAACAACAAAGGAAACACAAGCTATGAACAAGCAAGAGTTTGGGGAGTGAAATATTTCAACAACAACTTTGATAGATTGGTCAAAATCAAGACTAAAGTTGATCCAACAAATTTCTTTAGGAATGAACAAAGTGTTCCTCCTCTATATATATAATTTATGCACTCTACAAATAAGGCTTATCATATATAGTAGTTCTTTTATGTATATATATATAGTAATATAGTACTGAAAAATAAATGTAGCCAGGAAGCCTTCCAAAGATATTTTATAAGATGTATTATTGTTTGATTT</gDNA_template>
            <first_frame> I  N  G  L  E  G  I  W  K  L  F  N  Q  V  G  E  N  S  A  E  L  Q  L  S  P  Y  G  G  K  L  S  E  I  S  E  S  E  T  P  F  P  H  R  D  G  N  I  F  M  I  H  Y  G  V  N  W  G  E  M  E  S  S  N  K  H  I  S  W  I  R  N  L  Y  G  Y  M  A  R  Y  V  S  R  S  P  R  A  A  Y  L  N  Y  R  D  L  D  L  G  V  N  N  K  G  N  T  S  Y  E  Q  A  R  V  W  G  V  K  Y  F  N  N  N  F  D  R  L  V  K  I  K  T  K  V  D  P  T  N  F  F  R  N  E  Q  S  V  P  P  L  Y  I  *  F  M  H  S  T  N  K  A  Y  H  I  *  *  F  F  Y  V  Y  I  Y  S  N  I  V  L  K  N  K  C  S  Q  E  A  F  Q  R  Y  F  I  R  C  I  I  V  *  F </first_frame>
            <second_frame>  *  M  V  L  K  V  Y  G  N  Y  S  T  K  *  A  K  T  R  L  N  Y  N  *  V  P  M  E  E  S  *  V  R  Y  R  N  L  K  H  L  S  L  I  E  M  E  T  Y  S  *  S  I  M  G  *  I  G  V  K  W  K  V  L  I  S  I  Y  L  G  F  E  T  F  M  D  T  W  L  G  M  C  Q  D  L  L  E  L  L  I  *  T  I  E  I  L  I  *  E  *  T  T  K  E  T  Q  A  M  N  K  Q  E  F  G  E  *  N  I  S  T  T  T  L  I  D  W  S  K  S  R  L  K  L  I  Q  Q  I  S  L  G  M  N  K  V  F  L  L  Y  I  Y  N  L  C  T  L  Q  I  R  L  I  I  Y  S  S  S  F  M  Y  I  Y  I  V  I  *  Y  *  K  I  N  V  A  R  K  P  S  K  D  I  L  *  D  V  L  L  F  D   </second_frame>
            <third_frame>   K  W  S  *  R  Y  M  E  T  I  Q  P  S  R  R  K  L  G  *  I  T  I  K  S  L  W  R  K  V  E  *  D  I  G  I  *  N  T  F  P  S  *  R  W  K  H  I  H  D  P  L  W  G  E  L  G  *  N  G  K  F  *  *  A  Y  I  L  D  S  K  P  L  W  I  H  G  *  V  C  V  K  I  S  *  S  C  L  F  E  L  *  R  S  *  F  R  S  E  Q  Q  R  K  H  K  L  *  T  S  K  S  L  G  S  E  I  F  Q  Q  Q  L  *  *  I  G  Q  N  Q  D  *  S  *  S  N  K  F  L  *  E  *  T  K  C  S  S  S  I  Y  I  I  Y  A  L  Y  K  *  G  L  S  Y  I  V  V  L  L  C  I  Y  I  *  *  Y  S  T  E  K  *  M  *  P  G  S  L  P  K  I  F  Y  K  M  Y  Y  C  L  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0064E19.2" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="51022" stop="50576"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>444</number_coding_nucleotides>
                  <number_encoded_amino_acids>148</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>INGLEGIWKLFNQVGENSAELQLSPYGGKLSEISESETPFPHRDGNIFMIHYGVNWGEMESSNKHISWIRNLYGYMARYVSRSPRAAYLNYRDLDLGVNNKGNTSYEQARVWGVKYFNNNFDRLVKIKTKVDPTNFFRNEQSVPPLYI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="52151" PGL_stop="51329"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="52151" e_stop="51329"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.904"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.904">
            <gDNA_exon_boundary e_start="52151" e_stop="51329" e_length="823"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52151" stop="51431"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E546047" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52150" stop="51607"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355914" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52137" stop="51329"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E576602" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTTAACAATCTTTTTCTTTCTCTCAATTTGCCTAATTTCATCATCATGGGCTAACAAAACTCATGATGACTTTCTTAAATGCCTTTCTCACAAAATTATGAACTCAAACTCAAAATCACAAGTTATCTACACTCCTAAAAACTCATCATATTCCACCCTTTATGACTCTTTTTCAAGTAATCTAAGGATAACTTCCGATTTCAAACCATCAATTATTTTCACTCCTAATGATGAATCTCAAATCCAGGAAGCTATACATTGCTCCAAGAAACATGGCTTGCAAATTAGAATTCGAGGCGGTGGACATGACTATGAGGGACTTTCATACATTTCTGAAACCCCGTTTGTCATAATTGATCTTAGAAACCTAAGAGCAATATCCATTGATACGGAAGACAAGACTGCTTGGATTCAAGCTGGCGCGAGACTAGGGGAAGTTTACTATAGAATCGCGGAAAAAAGTAAAAAATTAGCCTTTGTTGCTGGGGTTTGCCCTACTGTTGGTGTTGGTGGACACTTTAGTGGTGGAGGGTATGGTATGATGTCACGAAAATTCGGTACTGCTGCTGATAACATCATTGATGCAAAGTTAATTGATGCTAATGGACGTATCCATGATCGAGAATCAATGGGTGAGGATCACTTTTGGGCTATTAGAGGAGGTGGAGGGACTAGTTTTGGTCTCATTATCTCATGGAAGGTGAAATTACTTGATATTCCACAAAAGGTAACCGTATTCAATGTGACACGAACGTTGGAACAAAATGCAACTCAGCTAGTCTACAAATGGCAACACATCGCGGACAAAGTTGATGACAATCTC</gDNA_template>
            <first_frame> L  N  N  L  F  L  S  L  N  L  P  N  F  I  I  M  G  *  Q  N  S  *  *  L  S  *  M  P  F  S  Q  N  Y  E  L  K  L  K  I  T  S  Y  L  H  S  *  K  L  I  I  F  H  P  L  *  L  F  F  K  *  S  K  D  N  F  R  F  Q  T  I  N  Y  F  H  S  *  *  *  I  S  N  P  G  S  Y  T  L  L  Q  E  T  W  L  A  N  *  N  S  R  R  W  T  *  L  *  G  T  F  I  H  F  *  N  P  V  C  H  N  *  S  *  K  P  K  S  N  I  H  *  Y  G  R  Q  D  C  L  D  S  S  W  R  E  T  R  G  S  L  L  *  N  R  G  K  K  *  K  I  S  L  C  C  W  G  L  P  Y  C  W  C  W  W  T  L  *  W  W  R  V  W  Y  D  V  T  K  I  R  Y  C  C  *  *  H  H  *  C  K  V  N  *  C  *  W  T  Y  P  *  S  R  I  N  G  *  G  S  L  L  G  Y  *  R  R  W  R  D  *  F  W  S  H  Y  L  M  E  G  E  I  T  *  Y  S  T  K  G  N  R  I  Q  C  D  T  N  V  G  T  K  C  N  S  A  S  L  Q  M  A  T  H  R  G  Q  S  *  *  Q  S  </first_frame>
            <second_frame>  L  T  I  F  F  F  L  S  I  C  L  I  S  S  S  W  A  N  K  T  H  D  D  F  L  K  C  L  S  H  K  I  M  N  S  N  S  K  S  Q  V  I  Y  T  P  K  N  S  S  Y  S  T  L  Y  D  S  F  S  S  N  L  R  I  T  S  D  F  K  P  S  I  I  F  T  P  N  D  E  S  Q  I  Q  E  A  I  H  C  S  K  K  H  G  L  Q  I  R  I  R  G  G  G  H  D  Y  E  G  L  S  Y  I  S  E  T  P  F  V  I  I  D  L  R  N  L  R  A  I  S  I  D  T  E  D  K  T  A  W  I  Q  A  G  A  R  L  G  E  V  Y  Y  R  I  A  E  K  S  K  K  L  A  F  V  A  G  V  C  P  T  V  G  V  G  G  H  F  S  G  G  G  Y  G  M  M  S  R  K  F  G  T  A  A  D  N  I  I  D  A  K  L  I  D  A  N  G  R  I  H  D  R  E  S  M  G  E  D  H  F  W  A  I  R  G  G  G  G  T  S  F  G  L  I  I  S  W  K  V  K  L  L  D  I  P  Q  K  V  T  V  F  N  V  T  R  T  L  E  Q  N  A  T  Q  L  V  Y  K  W  Q  H  I  A  D  K  V  D  D  N  L </second_frame>
            <third_frame>   *  Q  S  F  S  F  S  Q  F  A  *  F  H  H  H  G  L  T  K  L  M  M  T  F  L  N  A  F  L  T  K  L  *  T  Q  T  Q  N  H  K  L  S  T  L  L  K  T  H  H  I  P  P  F  M  T  L  F  Q  V  I  *  G  *  L  P  I  S  N  H  Q  L  F  S  L  L  M  M  N  L  K  S  R  K  L  Y  I  A  P  R  N  M  A  C  K  L  E  F  E  A  V  D  M  T  M  R  D  F  H  T  F  L  K  P  R  L  S  *  L  I  L  E  T  *  E  Q  Y  P  L  I  R  K  T  R  L  L  G  F  K  L  A  R  D  *  G  K  F  T  I  E  S  R  K  K  V  K  N  *  P  L  L  L  G  F  A  L  L  L  V  L  V  D  T  L  V  V  E  G  M  V  *  C  H  E  N  S  V  L  L  L  I  T  S  L  M  Q  S  *  L  M  L  M  D  V  S  M  I  E  N  Q  W  V  R  I  T  F  G  L  L  E  E  V  E  G  L  V  L  V  S  L  S  H  G  R  *  N  Y  L  I  F  H  K  R  *  P  Y  S  M  *  H  E  R  W  N  K  M  Q  L  S  *  S  T  N  G  N  T  S  R  T  K  L  M  T  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0064E19.2" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="52150" stop="51329"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>822</number_coding_nucleotides>
                  <number_encoded_amino_acids>274</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LTIFFFLSICLISSSWANKTHDDFLKCLSHKIMNSNSKSQVIYTPKNSSYSTLYDSFSSNLRITSDFKPSIIFTPNDESQIQEAIHCSKKHGLQIRIRGGGHDYEGLSYISETPFVIIDLRNLRAISIDTEDKTAWIQAGARLGEVYYRIAEKSKKLAFVAGVCPTVGVGGHFSGGGYGMMSRKFGTAADNIIDAKLIDANGRIHDRESMGEDHFWAIRGGGGTSFGLIISWKVKLLDIPQKVTVFNVTRTLEQNATQLVYKWQHIADKVDDNL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="-" PGL_start="59708" PGL_stop="59063"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="59708" e_stop="59063"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.989"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.989">
            <gDNA_exon_boundary e_start="59708" e_stop="59063" e_length="646"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59708" stop="59063"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E698928" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AACAAATAATCAAATGATGACTAGTTTCAACAAGTTAACAATCTTTTTCTTTCTCTCAATTTGCCTAATTTCATCATCATGGGCTAACAAAACTCATGATGACTTTCTTGAATGCCTTTCTCACAAAATTATGAACTCAACCTTAATATCACAAGTAATCCACACTCCTAAAAACTCATCATATTCAACCATTTATAACTCCTATTCAGATAACGTAAGGATAACCTCCGACTTCAAACCATCAATTATTTTCACTCCTACCAAAGAATCTCAAATCCAGGCAGCTATACATTGCTCCAAGATACATGACCTACAAATTAGGATTCGAAGCGGTGGACATGACTATGAGGGACTTTCATACACTTCGGACACCCCTTTTTTCATAATTGATCTTAGAAACCTAAGATCAATATCCGTTGATACCCAAAAAAAGACTGCTTGGATTCAAGCTGGCGCGACTCTAGGGGAAGTTTACTATAGAATCGCGGAAAAAAGTAAAAAATTGGCTGTAGTTGCTGGGGTTTGCCCAACTGTTGGTGTTGGTGGACACTTTAGTGGTGGAGGCTATGGCATGATGTCACGAAAATTCGGTACTGCTGCTGATAACATCATTGATGCAAAATTAATTGATGCTAATGGACGAATT</gDNA_template>
            <first_frame> N  K  *  S  N  D  D  *  F  Q  Q  V  N  N  L  F  L  S  L  N  L  P  N  F  I  I  M  G  *  Q  N  S  *  *  L  S  *  M  P  F  S  Q  N  Y  E  L  N  L  N  I  T  S  N  P  H  S  *  K  L  I  I  F  N  H  L  *  L  L  F  R  *  R  K  D  N  L  R  L  Q  T  I  N  Y  F  H  S  Y  Q  R  I  S  N  P  G  S  Y  T  L  L  Q  D  T  *  P  T  N  *  D  S  K  R  W  T  *  L  *  G  T  F  I  H  F  G  H  P  F  F  H  N  *  S  *  K  P  K  I  N  I  R  *  Y  P  K  K  D  C  L  D  S  S  W  R  D  S  R  G  S  L  L  *  N  R  G  K  K  *  K  I  G  C  S  C  W  G  L  P  N  C  W  C  W  W  T  L  *  W  W  R  L  W  H  D  V  T  K  I  R  Y  C  C  *  *  H  H  *  C  K  I  N  *  C  *  W  T  N  </first_frame>
            <second_frame>  T  N  N  Q  M  M  T  S  F  N  K  L  T  I  F  F  F  L  S  I  C  L  I  S  S  S  W  A  N  K  T  H  D  D  F  L  E  C  L  S  H  K  I  M  N  S  T  L  I  S  Q  V  I  H  T  P  K  N  S  S  Y  S  T  I  Y  N  S  Y  S  D  N  V  R  I  T  S  D  F  K  P  S  I  I  F  T  P  T  K  E  S  Q  I  Q  A  A  I  H  C  S  K  I  H  D  L  Q  I  R  I  R  S  G  G  H  D  Y  E  G  L  S  Y  T  S  D  T  P  F  F  I  I  D  L  R  N  L  R  S  I  S  V  D  T  Q  K  K  T  A  W  I  Q  A  G  A  T  L  G  E  V  Y  Y  R  I  A  E  K  S  K  K  L  A  V  V  A  G  V  C  P  T  V  G  V  G  G  H  F  S  G  G  G  Y  G  M  M  S  R  K  F  G  T  A  A  D  N  I  I  D  A  K  L  I  D  A  N  G  R  I </second_frame>
            <third_frame>   Q  I  I  K  *  *  L  V  S  T  S  *  Q  S  F  S  F  S  Q  F  A  *  F  H  H  H  G  L  T  K  L  M  M  T  F  L  N  A  F  L  T  K  L  *  T  Q  P  *  Y  H  K  *  S  T  L  L  K  T  H  H  I  Q  P  F  I  T  P  I  Q  I  T  *  G  *  P  P  T  S  N  H  Q  L  F  S  L  L  P  K  N  L  K  S  R  Q  L  Y  I  A  P  R  Y  M  T  Y  K  L  G  F  E  A  V  D  M  T  M  R  D  F  H  T  L  R  T  P  L  F  S  *  L  I  L  E  T  *  D  Q  Y  P  L  I  P  K  K  R  L  L  G  F  K  L  A  R  L  *  G  K  F  T  I  E  S  R  K  K  V  K  N  W  L  *  L  L  G  F  A  Q  L  L  V  L  V  D  T  L  V  V  E  A  M  A  *  C  H  E  N  S  V  L  L  L  I  T  S  L  M  Q  N  *  L  M  L  M  D  E   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0064E19.2" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="59707" stop="59063"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>645</number_coding_nucleotides>
                  <number_encoded_amino_acids>215</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TNNQMMTSFNKLTIFFFLSICLISSSWANKTHDDFLECLSHKIMNSTLISQVIHTPKNSSYSTIYNSYSDNVRITSDFKPSIIFTPTKESQIQAAIHCSKIHDLQIRIRSGGHDYEGLSYTSDTPFFIIDLRNLRSISVDTQKKTAWIQAGATLGEVYYRIAEKSKKLAVVAGVCPTVGVGGHFSGGGYGMMSRKFGTAADNIIDAKLIDANGRI</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="-" PGL_start="70889" PGL_stop="70437"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="70889" e_stop="70437"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.989"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.989">
            <gDNA_exon_boundary e_start="70889" e_stop="70437" e_length="453"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70889" stop="70437"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E544842" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70889" stop="70437"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549109" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70888" stop="70437"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308623" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATTCCTTTCCCTCATAGAGCTGGAAATATATTCACGATCGAGTATGGAGTGTATTGGAGTAGAATCGAAAATTCTCAAAGAAATATAGCTTGGATTCGAAAACTTTATGAATACATGGGTAAGTATGTGTCAAAATCTCCTAGAGCTGCATATTTGAACTATAGAGATCTTGATTTAGGAATGAACAATATTAATGGAAACACAAGCTATGAACAAGCAAGAGTTTGGGGAGTGAAATATTTCAACAACAACTTTGATAGATTAGTACAAGTCAAGACTAAGTTTGATCCAACTAATTTCTTTAGGAATCAACAAAGTATTCCTCCTCTATTATCTTTAGGTTATAATATATGGTAGTTAATTTATATATAATACTATAGTACTGAAAAATAAATGTACGTAGCAAGGATCGATTTGTTTCAAAGATTATGTACGATATATATTGTTTGATTT</gDNA_template>
            <first_frame> I  P  F  P  H  R  A  G  N  I  F  T  I  E  Y  G  V  Y  W  S  R  I  E  N  S  Q  R  N  I  A  W  I  R  K  L  Y  E  Y  M  G  K  Y  V  S  K  S  P  R  A  A  Y  L  N  Y  R  D  L  D  L  G  M  N  N  I  N  G  N  T  S  Y  E  Q  A  R  V  W  G  V  K  Y  F  N  N  N  F  D  R  L  V  Q  V  K  T  K  F  D  P  T  N  F  F  R  N  Q  Q  S  I  P  P  L  L  S  L  G  Y  N  I  W  *  L  I  Y  I  *  Y  Y  S  T  E  K  *  M  Y  V  A  R  I  D  L  F  Q  R  L  C  T  I  Y  I  V  *  F </first_frame>
            <second_frame>  F  L  S  L  I  E  L  E  I  Y  S  R  S  S  M  E  C  I  G  V  E  S  K  I  L  K  E  I  *  L  G  F  E  N  F  M  N  T  W  V  S  M  C  Q  N  L  L  E  L  H  I  *  T  I  E  I  L  I  *  E  *  T  I  L  M  E  T  Q  A  M  N  K  Q  E  F  G  E  *  N  I  S  T  T  T  L  I  D  *  Y  K  S  R  L  S  L  I  Q  L  I  S  L  G  I  N  K  V  F  L  L  Y  Y  L  *  V  I  I  Y  G  S  *  F  I  Y  N  T  I  V  L  K  N  K  C  T  *  Q  G  S  I  C  F  K  D  Y  V  R  Y  I  L  F  D   </second_frame>
            <third_frame>   S  F  P  S  *  S  W  K  Y  I  H  D  R  V  W  S  V  L  E  *  N  R  K  F  S  K  K  Y  S  L  D  S  K  T  L  *  I  H  G  *  V  C  V  K  I  S  *  S  C  I  F  E  L  *  R  S  *  F  R  N  E  Q  Y  *  W  K  H  K  L  *  T  S  K  S  L  G  S  E  I  F  Q  Q  Q  L  *  *  I  S  T  S  Q  D  *  V  *  S  N  *  F  L  *  E  S  T  K  Y  S  S  S  I  I  F  R  L  *  Y  M  V  V  N  L  Y  I  I  L  *  Y  *  K  I  N  V  R  S  K  D  R  F  V  S  K  I  M  Y  D  I  Y  C  L  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0064E19.2" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="70889" stop="70533"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>354</number_coding_nucleotides>
                  <number_encoded_amino_acids>118</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IPFPHRAGNIFTIEYGVYWSRIENSQRNIAWIRKLYEYMGKYVSKSPRAAYLNYRDLDLGMNNINGNTSYEQARVWGVKYFNNNFDRLVQVKTKFDPTNFFRNQQSIPPLLSLGYNIW*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="79632" PGL_stop="78409"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="79632" e_stop="78409"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.918"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.918">
            <gDNA_exon_boundary e_start="79632" e_stop="78409" e_length="1224"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79632" stop="78899"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E449822" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79254" stop="78612"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E623032" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79083" stop="78409"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E613152" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAATTATGAACTCAACCTTAATATCACAAGTCATACACACTCCTAAAAACTCATCATATTCCACCCTTTTAAACTCATTTTCATTTAACCTAAGGATAAGCTCCAACTTCGAACCATCAACAATTTTCACTCCTACCAACGAATCTCAAATCCAGGAAGCTATACATTGCTCCAAGAAACATGGTCTACAAATTAGAATTCGAGGCGGTGGACATGACTATGAGGGACTTTCATACATTTCCGAGATTCCCTTTGTCGTAATTGATCTTAGAAACCTAAGATCAATATCCATTGACACCGAAAAAAAGACAGCTTGGATTCAAGCTGGCGCGACCCTAGGAGAAGTTTACTATAGAATCGCGGAAAAAAGTAAAAAATTAGCCTTTGCTGCTGGGGTTTGCCCAACTGTGGGTGTTGGTGGACACTTTAGTGGTGGAGGGTATGGTATGTTGTCAAGAAAATACGGTACTGCTGCTGATAACATCATTGATGCAAAATTAATTGGTGCTAATGGACGTATCCATGATCGAGAATCAATGGGTGAGGATCACTTTTGGGCTATTAGAGGAGGTGGAGGGACTAGTTTTGGTCTCATTATCTCGTGGAAAATAAAATTAGTTGATATTCCAGAAAAGGTAACCGTGTTCAATGTGCCACGAACATTGGAACAAAATGTTACTCAACTTGTTTACAAATGGCAACATATCGCAGACAAAGTTGATGACAATCTCCTCCTCAGGATCTTCGTGAGAAATAGTGAATTTCCATTCGGGGGTGGGCAAAGGACTATCCACGCCTCTTTCGTTGCACTATACGTTGGAGGAGTGGATGAACTCCTCCACGAAGTTCAAAAGAGCTTCGCGGAGCTAGGGTTAGTGAAAGACGATTGCATTGAGATGAGTTGGATTGAATCTACACTCTTCTTTGCGGGTTTCCCTAGGAATACATCACTTGATGTGTTACTAAATTGGAATACCACAACTAATCAAAAAGGATACTTCAAAGGGAAATCAGACTATGTCCAACAAACAATTTCTTTGAATGGTATTGAAGGTGTATTGAAACTATTATTCAACCAATTAGGAGGCGAAAACTCGGGTGCTGAATTACAATTTAGTCCTTACGGAGGAAAGTTGAGCGATATCTCAGAATTTGAAATTCCTTTCCCTCATAGAGCTGGAAACATATTCATGATTGAGTACGCGGTGTATTGGGGAAATATTA</gDNA_template>
            <first_frame> K  L  *  T  Q  P  *  Y  H  K  S  Y  T  L  L  K  T  H  H  I  P  P  F  *  T  H  F  H  L  T  *  G  *  A  P  T  S  N  H  Q  Q  F  S  L  L  P  T  N  L  K  S  R  K  L  Y  I  A  P  R  N  M  V  Y  K  L  E  F  E  A  V  D  M  T  M  R  D  F  H  T  F  P  R  F  P  L  S  *  L  I  L  E  T  *  D  Q  Y  P  L  T  P  K  K  R  Q  L  G  F  K  L  A  R  P  *  E  K  F  T  I  E  S  R  K  K  V  K  N  *  P  L  L  L  G  F  A  Q  L  W  V  L  V  D  T  L  V  V  E  G  M  V  C  C  Q  E  N  T  V  L  L  L  I  T  S  L  M  Q  N  *  L  V  L  M  D  V  S  M  I  E  N  Q  W  V  R  I  T  F  G  L  L  E  E  V  E  G  L  V  L  V  S  L  S  R  G  K  *  N  *  L  I  F  Q  K  R  *  P  C  S  M  C  H  E  H  W  N  K  M  L  L  N  L  F  T  N  G  N  I  S  Q  T  K  L  M  T  I  S  S  S  G  S  S  *  E  I  V  N  F  H  S  G  V  G  K  G  L  S  T  P  L  S  L  H  Y  T  L  E  E  W  M  N  S  S  T  K  F  K  R  A  S  R  S  *  G  *  *  K  T  I  A  L  R  *  V  G  L  N  L  H  S  S  L  R  V  S  L  G  I  H  H  L  M  C  Y  *  I  G  I  P  Q  L  I  K  K  D  T  S  K  G  N  Q  T  M  S  N  K  Q  F  L  *  M  V  L  K  V  Y  *  N  Y  Y  S  T  N  *  E  A  K  T  R  V  L  N  Y  N  L  V  L  T  E  E  S  *  A  I  S  Q  N  L  K  F  L  S  L  I  E  L  E  T  Y  S  *  L  S  T  R  C  I  G  E  I  L </first_frame>
            <second_frame>  N  Y  E  L  N  L  N  I  T  S  H  T  H  S  *  K  L  I  I  F  H  P  F  K  L  I  F  I  *  P  K  D  K  L  Q  L  R  T  I  N  N  F  H  S  Y  Q  R  I  S  N  P  G  S  Y  T  L  L  Q  E  T  W  S  T  N  *  N  S  R  R  W  T  *  L  *  G  T  F  I  H  F  R  D  S  L  C  R  N  *  S  *  K  P  K  I  N  I  H  *  H  R  K  K  D  S  L  D  S  S  W  R  D  P  R  R  S  L  L  *  N  R  G  K  K  *  K  I  S  L  C  C  W  G  L  P  N  C  G  C  W  W  T  L  *  W  W  R  V  W  Y  V  V  K  K  I  R  Y  C  C  *  *  H  H  *  C  K  I  N  W  C  *  W  T  Y  P  *  S  R  I  N  G  *  G  S  L  L  G  Y  *  R  R  W  R  D  *  F  W  S  H  Y  L  V  E  N  K  I  S  *  Y  S  R  K  G  N  R  V  Q  C  A  T  N  I  G  T  K  C  Y  S  T  C  L  Q  M  A  T  Y  R  R  Q  S  *  *  Q  S  P  P  Q  D  L  R  E  K  *  *  I  S  I  R  G  W  A  K  D  Y  P  R  L  F  R  C  T  I  R  W  R  S  G  *  T  P  P  R  S  S  K  E  L  R  G  A  R  V  S  E  R  R  L  H  *  D  E  L  D  *  I  Y  T  L  L  C  G  F  P  *  E  Y  I  T  *  C  V  T  K  L  E  Y  H  N  *  S  K  R  I  L  Q  R  E  I  R  L  C  P  T  N  N  F  F  E  W  Y  *  R  C  I  E  T  I  I  Q  P  I  R  R  R  K  L  G  C  *  I  T  I  *  S  L  R  R  K  V  E  R  Y  L  R  I  *  N  S  F  P  S  *  S  W  K  H  I  H  D  *  V  R  G  V  L  G  K  Y   </second_frame>
            <third_frame>   I  M  N  S  T  L  I  S  Q  V  I  H  T  P  K  N  S  S  Y  S  T  L  L  N  S  F  S  F  N  L  R  I  S  S  N  F  E  P  S  T  I  F  T  P  T  N  E  S  Q  I  Q  E  A  I  H  C  S  K  K  H  G  L  Q  I  R  I  R  G  G  G  H  D  Y  E  G  L  S  Y  I  S  E  I  P  F  V  V  I  D  L  R  N  L  R  S  I  S  I  D  T  E  K  K  T  A  W  I  Q  A  G  A  T  L  G  E  V  Y  Y  R  I  A  E  K  S  K  K  L  A  F  A  A  G  V  C  P  T  V  G  V  G  G  H  F  S  G  G  G  Y  G  M  L  S  R  K  Y  G  T  A  A  D  N  I  I  D  A  K  L  I  G  A  N  G  R  I  H  D  R  E  S  M  G  E  D  H  F  W  A  I  R  G  G  G  G  T  S  F  G  L  I  I  S  W  K  I  K  L  V  D  I  P  E  K  V  T  V  F  N  V  P  R  T  L  E  Q  N  V  T  Q  L  V  Y  K  W  Q  H  I  A  D  K  V  D  D  N  L  L  L  R  I  F  V  R  N  S  E  F  P  F  G  G  G  Q  R  T  I  H  A  S  F  V  A  L  Y  V  G  G  V  D  E  L  L  H  E  V  Q  K  S  F  A  E  L  G  L  V  K  D  D  C  I  E  M  S  W  I  E  S  T  L  F  F  A  G  F  P  R  N  T  S  L  D  V  L  L  N  W  N  T  T  T  N  Q  K  G  Y  F  K  G  K  S  D  Y  V  Q  Q  T  I  S  L  N  G  I  E  G  V  L  K  L  L  F  N  Q  L  G  G  E  N  S  G  A  E  L  Q  F  S  P  Y  G  G  K  L  S  D  I  S  E  F  E  I  P  F  P  H  R  A  G  N  I  F  M  I  E  Y  A  V  Y  W  G  N  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0064E19.2" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="79630" stop="78410"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1221</number_coding_nucleotides>
                  <number_encoded_amino_acids>407</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IMNSTLISQVIHTPKNSSYSTLLNSFSFNLRISSNFEPSTIFTPTNESQIQEAIHCSKKHGLQIRIRGGGHDYEGLSYISEIPFVVIDLRNLRSISIDTEKKTAWIQAGATLGEVYYRIAEKSKKLAFAAGVCPTVGVGGHFSGGGYGMLSRKYGTAADNIIDAKLIGANGRIHDRESMGEDHFWAIRGGGGTSFGLIISWKIKLVDIPEKVTVFNVPRTLEQNVTQLVYKWQHIADKVDDNLLLRIFVRNSEFPFGGGQRTIHASFVALYVGGVDELLHEVQKSFAELGLVKDDCIEMSWIESTLFFAGFPRNTSLDVLLNWNTTTNQKGYFKGKSDYVQQTISLNGIEGVLKLLFNQLGGENSGAELQFSPYGGKLSDISEFEIPFPHRAGNIFMIEYAVYWGNI</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="84256" PGL_stop="81597"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="84256" e_stop="84219"/>
            <exon e_start="83716" e_stop="82751"/>
            <exon e_start="82669" e_stop="82545"/>
            <exon e_start="82457" e_stop="82313"/>
            <exon e_start="82223" e_stop="81789"/>
            <exon e_start="81606" e_stop="81597"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.932" e_score="1.000"/>
          <exon-intron don_prob="0.973" acc_prob="0.973" e_score="0.925"/>
          <exon-intron don_prob="1.000" acc_prob="0.967" e_score="0.968"/>
          <exon-intron don_prob="0.947" acc_prob="0.996" e_score="0.979"/>
          <exon-intron don_prob="0.000" acc_prob="0.648" e_score="0.993"/>
          <exon-only e_score="0.700"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="84256" e_stop="84219" e_length="38"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.932">
            <gDNA_intron_boundary i_start="84218" i_stop="83717" i_length="502"/>
          </intron>
          <exon e_serial="2" e_score="0.925">
            <gDNA_exon_boundary e_start="83716" e_stop="82751" e_length="966"/>
          </exon>
          <intron i_serial="2" don_prob="0.973" acc_prob="0.973">
            <gDNA_intron_boundary i_start="82750" i_stop="82670" i_length="81"/>
          </intron>
          <exon e_serial="3" e_score="0.968">
            <gDNA_exon_boundary e_start="82669" e_stop="82545" e_length="125"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.967">
            <gDNA_intron_boundary i_start="82544" i_stop="82458" i_length="87"/>
          </intron>
          <exon e_serial="4" e_score="0.979">
            <gDNA_exon_boundary e_start="82457" e_stop="82313" e_length="145"/>
          </exon>
          <intron i_serial="4" don_prob="0.947" acc_prob="0.996">
            <gDNA_intron_boundary i_start="82312" i_stop="82224" i_length="89"/>
          </intron>
          <exon e_serial="5" e_score="0.993">
            <gDNA_exon_boundary e_start="82223" e_stop="81789" e_length="435"/>
          </exon>
          <intron i_serial="5" don_prob="0.000" acc_prob="0.648">
            <gDNA_intron_boundary i_start="81788" i_stop="81607" i_length="182"/>
          </intron>
          <exon e_serial="6" e_score="0.700">
            <gDNA_exon_boundary e_start="81606" e_stop="81597" e_length="10"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84256" stop="84219"/>
              <exon start="83716" stop="83143"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E314318" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84250" stop="84219"/>
              <exon start="83716" stop="83352"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309464" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84250" stop="84219"/>
              <exon start="83716" stop="83378"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E300745" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83394" stop="82751"/>
              <exon start="82669" stop="82641"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E456619" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83302" stop="82751"/>
              <exon start="82669" stop="82639"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E443076" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82800" stop="82751"/>
              <exon start="82669" stop="82545"/>
              <exon start="82457" stop="82313"/>
              <exon start="82223" stop="82203"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E458523" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82605" stop="82545"/>
              <exon start="82457" stop="82313"/>
              <exon start="82223" stop="81789"/>
              <exon start="81606" stop="81597"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E337202" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTCACACAAGCAAAGCAACCTCATTCAACTCCAAAAG : CTGTTTAGGGGAGGAGGTGATTTCTAAGATCCAACACTTGTGTAATTGTGTTATTTATCTAAAAACATGACTGTTGAGGTGCAATGTGAGGCAACTCAAGTGGCTGAAGTAGTTGTTCCACAAGAGGAATTAGTGGCTGCTAACAAGGTTGTGGAGGAGGTTGAGGTGAATGAGAAGGTAAAAGAAGATGAAGAAGAGGAATCCAAGCCTAATACAATTGAGAAAAGCTCTTCTTATAGAGAAGAGAGCAACTTCCTCTCTGATCTCAAAGAGAATGAGAAGAAGGCATTGAATGAGTTGAAATCTATAGTTGAGGAGGCCATTGTTGGGAACACTCTATTCAAAAAAGAAGAGACCAACAAGTCTCTAGAGGAAGAGGGAAAGAATGAGGAAAATCCCGATGCGAATATAGAGGAGAAGGAGGGTGATTTGGATGTTGTTGAAGTGGATAGAGAGATTTCTATTTGGGGTGTACCCATTTTGCCTAGCAAAGGGGATGAGAAAACCAATGTGGTTCTATTGAAATTCTTGAGAGCAAGGGATTACAAAGTGAATGAATCTTTCGAAATGCTCAAGAAAACACTCCAGTGGAGGAAGGATTTTAATATCCAATCCATCTTGGAGGAAGATTTGGGCTCAGATCTTGCACCAGCTGCTTACATGAGTGGGGTTGATAACCAAGGACACCCTATTTGTTACAACATTTTCGGCGTTTTGGAAGATGAAGAGATTTATAACAAAACGTTCGGGACAGAGGAGAAACGGAATCAGTTCTTGAGGTGGAGAGTTCAGTTAATGGAGAAGGGCATTCAGCAGCTTGATTTCAAAGCTGGAGGTGTTAGTTCACTGCTTCAGATAAATGATCTGAAGAACTCGCCTGGACCGTCTAAGAAAGAAGTCAGGGTTGCAACCAAACAAGCCGTTGATCTTCTTCAGGATAACTATCCTGAATTTGTTGCCAAAAAT : ATATTCATCAATGTTCCATTTTGGTATTACGCCGTGCACTCTCTGCTGTCGCCTTTCCTAACACAAAGAACCAAAAGCAAATTCGTATTTGCTCGCCCTGCTAAGGTCACTGAGACCTTGCTCAA : GTACATTCCAATCCATGAAATCCCTATTCAATATGGTGGACTCAAGAGGGAGAATGACTTTGAGTTTTCAGCCTCCGACTGTGAAGCTTCGGAGATTCTCCTTAAAGCTGGATCAATTGAAACTATTGAAATACCTGCAGTAGAT : GTGGAAAGTACATTTATCTGGGATGTTACGATTGTGGGCGGAGAAGTGAGCTATAAGGAGGAATTTGTGCCAGAGGATGAGACTTCTTACACTATAATCATTCAGAAGGACAAGAAGGTGAGCTCGACAATTCGCAACACGTTCAAGAACACTGAAGCAGGAAAGGTTGTGCTGACAATCAAGAACACTTCTAGCAAGAAGAAGAAGGCGTTTTATCGACACAAGATCACCAAATCAACAATTTGAGATGAGCAAGTTTCTATTTTGAGTGAAGATGGAGTTCTTTTTCTCTGTTTTTAAGAATATGTATAATGTAGTAACCTTTTTGTGGTGGTTCATATACTTGATTATTTTTGGTCCTACATTCATATTGTATATGCTGATTTATTCTTTTTTCTCCCTACAAGGAAGAATATGATCTCTCTATTTTTTACC : ATGGAAAAAA</gDNA_template>
            <first_frame> F  H  T  S  K  A  T  S  F  N  S  K  S :   C  L  G  E  E  V  I  S  K  I  Q  H  L  C  N  C  V  I  Y  L  K  T  *  L  L  R  C  N  V  R  Q  L  K  W  L  K  *  L  F  H  K  R  N  *  W  L  L  T  R  L  W  R  R  L  R  *  M  R  R  *  K  K  M  K  K  R  N  P  S  L  I  Q  L  R  K  A  L  L  I  E  K  R  A  T  S  S  L  I  S  K  R  M  R  R  R  H  *  M  S  *  N  L  *  L  R  R  P  L  L  G  T  L  Y  S  K  K  K  R  P  T  S  L  *  R  K  R  E  R  M  R  K  I  P  M  R  I  *  R  R  R  R  V  I  W  M  L  L  K  W  I  E  R  F  L  F  G  V  Y  P  F  C  L  A  K  G  M  R  K  P  M  W  F  Y  *  N  S  *  E  Q  G  I  T  K  *  M  N  L  S  K  C  S  R  K  H  S  S  G  G  R  I  L  I  S  N  P  S  W  R  K  I  W  A  Q  I  L  H  Q  L  L  T  *  V  G  L  I  T  K  D  T  L  F  V  T  T  F  S  A  F  W  K  M  K  R  F  I  T  K  R  S  G  Q  R  R  N  G  I  S  S  *  G  G  E  F  S  *  W  R  R  A  F  S  S  L  I  S  K  L  E  V  L  V  H  C  F  R  *  M  I  *  R  T  R  L  D  R  L  R  K  K  S  G  L  Q  P  N  K  P  L  I  F  F  R  I  T  I  L  N  L  L  P  K  I :   Y  S  S  M  F  H  F  G  I  T  P  C  T  L  C  C  R  L  S  *  H  K  E  P  K  A  N  S  Y  L  L  A  L  L  R  S  L  R  P  C  S   : S  T  F  Q  S  M  K  S  L  F  N  M  V  D  S  R  G  R  M  T  L  S  F  Q  P  P  T  V  K  L  R  R  F  S  L  K  L  D  Q  L  K  L  L  K  Y  L  Q  *  M :   W  K  V  H  L  S  G  M  L  R  L  W  A  E  K  *  A  I  R  R  N  L  C  Q  R  M  R  L  L  T  L  *  S  F  R  R  T  R  R  *  A  R  Q  F  A  T  R  S  R  T  L  K  Q  E  R  L  C  *  Q  S  R  T  L  L  A  R  R  R  R  R  F  I  D  T  R  S  P  N  Q  Q  F  E  M  S  K  F  L  F  *  V  K  M  E  F  F  F  S  V  F  K  N  M  Y  N  V  V  T  F  L  W  W  F  I  Y  L  I  I  F  G  P  T  F  I  L  Y  M  L  I  Y  S  F  F  S  L  Q  G  R  I  *  S  L  Y  F  L  P :   W  K  K </first_frame>
            <second_frame>  F  T  Q  A  K  Q  P  H  S  T  P  K   : A  V  *  G  R  R  *  F  L  R  S  N  T  C  V  I  V  L  F  I  *  K  H  D  C  *  G  A  M  *  G  N  S  S  G  *  S  S  C  S  T  R  G  I  S  G  C  *  Q  G  C  G  G  G  *  G  E  *  E  G  K  R  R  *  R  R  G  I  Q  A  *  Y  N  *  E  K  L  F  L  *  R  R  E  Q  L  P  L  *  S  Q  R  E  *  E  E  G  I  E  *  V  E  I  Y  S  *  G  G  H  C  W  E  H  S  I  Q  K  R  R  D  Q  Q  V  S  R  G  R  G  K  E  *  G  K  S  R  C  E  Y  R  G  E  G  G  *  F  G  C  C  *  S  G  *  R  D  F  Y  L  G  C  T  H  F  A  *  Q  R  G  *  E  N  Q  C  G  S  I  E  I  L  E  S  K  G  L  Q  S  E  *  I  F  R  N  A  Q  E  N  T  P  V  E  E  G  F  *  Y  P  I  H  L  G  G  R  F  G  L  R  S  C  T  S  C  L  H  E  W  G  *  *  P  R  T  P  Y  L  L  Q  H  F  R  R  F  G  R  *  R  D  L  *  Q  N  V  R  D  R  G  E  T  E  S  V  L  E  V  E  S  S  V  N  G  E  G  H  S  A  A  *  F  Q  S  W  R  C  *  F  T  A  S  D  K  *  S  E  E  L  A  W  T  V  *  E  R  S  Q  G  C  N  Q  T  S  R  *  S  S  S  G  *  L  S  *  I  C  C  Q  K   : Y  I  H  Q  C  S  I  L  V  L  R  R  A  L  S  A  V  A  F  P  N  T  K  N  Q  K  Q  I  R  I  C  S  P  C  *  G  H  *  D  L  A  Q  :  V  H  S  N  P  *  N  P  Y  S  I  W  W  T  Q  E  G  E  *  L  *  V  F  S  L  R  L  *  S  F  G  D  S  P  *  S  W  I  N  *  N  Y  *  N  T  C  S  R   : C  G  K  Y  I  Y  L  G  C  Y  D  C  G  R  R  S  E  L  *  G  G  I  C  A  R  G  *  D  F  L  H  Y  N  H  S  E  G  Q  E  G  E  L  D  N  S  Q  H  V  Q  E  H  *  S  R  K  G  C  A  D  N  Q  E  H  F  *  Q  E  E  E  G  V  L  S  T  Q  D  H  Q  I  N  N  L  R  *  A  S  F  Y  F  E  *  R  W  S  S  F  S  L  F  L  R  I  C  I  M  *  *  P  F  C  G  G  S  Y  T  *  L  F  L  V  L  H  S  Y  C  I  C  *  F  I  L  F  S  P  Y  K  E  E  Y  D  L  S  I  F  Y   : H  G  K   </second_frame>
            <third_frame>   S  H  K  Q  S  N  L  I  Q  L  Q  K  :  L  F  R  G  G  G  D  F  *  D  P  T  L  V  *  L  C  Y  L  S  K  N  M  T  V  E  V  Q  C  E  A  T  Q  V  A  E  V  V  V  P  Q  E  E  L  V  A  A  N  K  V  V  E  E  V  E  V  N  E  K  V  K  E  D  E  E  E  E  S  K  P  N  T  I  E  K  S  S  S  Y  R  E  E  S  N  F  L  S  D  L  K  E  N  E  K  K  A  L  N  E  L  K  S  I  V  E  E  A  I  V  G  N  T  L  F  K  K  E  E  T  N  K  S  L  E  E  E  G  K  N  E  E  N  P  D  A  N  I  E  E  K  E  G  D  L  D  V  V  E  V  D  R  E  I  S  I  W  G  V  P  I  L  P  S  K  G  D  E  K  T  N  V  V  L  L  K  F  L  R  A  R  D  Y  K  V  N  E  S  F  E  M  L  K  K  T  L  Q  W  R  K  D  F  N  I  Q  S  I  L  E  E  D  L  G  S  D  L  A  P  A  A  Y  M  S  G  V  D  N  Q  G  H  P  I  C  Y  N  I  F  G  V  L  E  D  E  E  I  Y  N  K  T  F  G  T  E  E  K  R  N  Q  F  L  R  W  R  V  Q  L  M  E  K  G  I  Q  Q  L  D  F  K  A  G  G  V  S  S  L  L  Q  I  N  D  L  K  N  S  P  G  P  S  K  K  E  V  R  V  A  T  K  Q  A  V  D  L  L  Q  D  N  Y  P  E  F  V  A  K  N  :  I  F  I  N  V  P  F  W  Y  Y  A  V  H  S  L  L  S  P  F  L  T  Q  R  T  K  S  K  F  V  F  A  R  P  A  K  V  T  E  T  L  L  K :   Y  I  P  I  H  E  I  P  I  Q  Y  G  G  L  K  R  E  N  D  F  E  F  S  A  S  D  C  E  A  S  E  I  L  L  K  A  G  S  I  E  T  I  E  I  P  A  V  D  :  V  E  S  T  F  I  W  D  V  T  I  V  G  G  E  V  S  Y  K  E  E  F  V  P  E  D  E  T  S  Y  T  I  I  I  Q  K  D  K  K  V  S  S  T  I  R  N  T  F  K  N  T  E  A  G  K  V  V  L  T  I  K  N  T  S  S  K  K  K  K  A  F  Y  R  H  K  I  T  K  S  T  I  *  D  E  Q  V  S  I  L  S  E  D  G  V  L  F  L  C  F  *  E  Y  V  *  C  S  N  L  F  V  V  V  H  I  L  D  Y  F  W  S  Y  I  H  I  V  Y  A  D  L  F  F  F  L  P  T  R  K  N  M  I  S  L  F  F  T  :  M  E  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0064E19.2" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="83671" stop="82751"/>
                    <exon start="82669" stop="82545"/>
                    <exon start="82457" stop="82313"/>
                    <exon start="82223" stop="81978"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1434</number_coding_nucleotides>
                  <number_encoded_amino_acids>478</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LCYLSKNMTVEVQCEATQVAEVVVPQEELVAANKVVEEVEVNEKVKEDEEEESKPNTIEKSSSYREESNFLSDLKENEKKALNELKSIVEEAIVGNTLFKKEETNKSLEEEGKNEENPDANIEEKEGDLDVVEVDREISIWGVPILPSKGDEKTNVVLLKFLRARDYKVNESFEMLKKTLQWRKDFNIQSILEEDLGSDLAPAAYMSGVDNQGHPICYNIFGVLEDEEIYNKTFGTEEKRNQFLRWRVQLMEKGIQQLDFKAGGVSSLLQINDLKNSPGPSKKEVRVATKQAVDLLQDNYPEFVAKNIFINVPFWYYAVHSLLSPFLTQRTKSKFVFARPAKVTETLLKYIPIHEIPIQYGGLKRENDFEFSASDCEASEILLKAGSIETIEIPAVDVESTFIWDVTIVGGEVSYKEEFVPEDETSYTIIIQKDKKVSSTIRNTFKNTEAGKVVLTIKNTSSKKKKAFYRHKITKSTI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="-" PGL_start="95597" PGL_stop="86155"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="92463" e_stop="92395"/>
            <exon e_start="92280" e_stop="92200"/>
            <exon e_start="90223" e_stop="90158"/>
            <exon e_start="90078" e_stop="89962"/>
            <exon e_start="89848" e_stop="89797"/>
            <exon e_start="89695" e_stop="89610"/>
            <exon e_start="87862" e_stop="87802"/>
            <exon e_start="86590" e_stop="86485"/>
            <exon e_start="86374" e_stop="86327"/>
            <exon e_start="86196" e_stop="86155"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.970" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="0.920" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.010" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.967" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="0.580" e_score="0.953"/>
          <exon-intron don_prob="0.963" acc_prob="0.000" e_score="0.958"/>
          <exon-only e_score="0.952"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="92463" e_stop="92395" e_length="69"/>
          </exon>
          <intron i_serial="1" don_prob="0.970" acc_prob="0.986">
            <gDNA_intron_boundary i_start="92394" i_stop="92281" i_length="114"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="92280" e_stop="92200" e_length="81"/>
          </exon>
          <intron i_serial="2" don_prob="0.920" acc_prob="0.998">
            <gDNA_intron_boundary i_start="92199" i_stop="90224" i_length="1976"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="90223" e_stop="90158" e_length="66"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.992">
            <gDNA_intron_boundary i_start="90157" i_stop="90079" i_length="79"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="90078" e_stop="89962" e_length="117"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="0.010">
            <gDNA_intron_boundary i_start="89961" i_stop="89849" i_length="113"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="89848" e_stop="89797" e_length="52"/>
          </exon>
          <intron i_serial="5" don_prob="0.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="89796" i_stop="89696" i_length="101"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="89695" e_stop="89610" e_length="86"/>
          </exon>
          <intron i_serial="6" don_prob="0.999" acc_prob="0.992">
            <gDNA_intron_boundary i_start="89609" i_stop="87863" i_length="1747"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="87862" e_stop="87802" e_length="61"/>
          </exon>
          <intron i_serial="7" don_prob="0.967" acc_prob="1.000">
            <gDNA_intron_boundary i_start="87801" i_stop="86591" i_length="1211"/>
          </intron>
          <exon e_serial="8" e_score="0.953">
            <gDNA_exon_boundary e_start="86590" e_stop="86485" e_length="106"/>
          </exon>
          <intron i_serial="8" don_prob="0.987" acc_prob="0.580">
            <gDNA_intron_boundary i_start="86484" i_stop="86375" i_length="110"/>
          </intron>
          <exon e_serial="9" e_score="0.958">
            <gDNA_exon_boundary e_start="86374" e_stop="86327" e_length="48"/>
          </exon>
          <intron i_serial="9" don_prob="0.963" acc_prob="0.000">
            <gDNA_intron_boundary i_start="86326" i_stop="86197" i_length="130"/>
          </intron>
          <exon e_serial="10" e_score="0.952">
            <gDNA_exon_boundary e_start="86196" e_stop="86155" e_length="42"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92463" stop="92395"/>
              <exon start="92280" stop="92200"/>
              <exon start="90223" stop="90158"/>
              <exon start="90078" stop="89962"/>
              <exon start="89848" stop="89797"/>
              <exon start="89695" stop="89610"/>
              <exon start="87862" stop="87802"/>
              <exon start="86590" stop="86485"/>
              <exon start="86374" stop="86327"/>
              <exon start="86196" stop="86155"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E379132" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92463" stop="92395"/>
              <exon start="92280" stop="92200"/>
              <exon start="90223" stop="90158"/>
              <exon start="90078" stop="89962"/>
              <exon start="89848" stop="89797"/>
              <exon start="89695" stop="89610"/>
              <exon start="87862" stop="87804"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E209446" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AATATGACAAGGTTCATAAGTCTCACTAACTTGGAAAGCAAGTAAAACTCAAGAAACATGGAGATCATG : ATCATCATTGCCTTCACTTATAGACGGAATGGTATGCTCATCGGCTGCAAGTATAGGACTCTTGAGAAAAGGTTTTGGCAG : GAGAAGGGTGCTGATAAGGTACTATATGGACTGGATGATGTAAGAGAAGCAGATGAGATCATCATT : GTAGAAGGTGAAATAGATAAGCTTTCAGTGGAAGAAGCTGGATTTCCTAACTGTGTCAGTGTTCCTAATGGTGCACCACAGGGCATCGCATCCAAAGAACTGCTACCACTGGAAGAG : ACAGGATACCAGATTTTCATACCTGTGGAACTGCAATGAGTGCTTGGAGAAG : GCGTCCCGGATTGTGCTGGCAACTGATGGTGATTTACCAGGCCAAGCATTGGCTGAAGAGCTTGCCCGCCGTCTGGGGAAAGAAAG : GTGTTGGCAAGTATGTTGGCCGAAAAAGAATGAGTTAAGCAGTTATAAAGATGCAAATGAG : GTACTTGTTAATCTGGGAAGAGAAGCTCTGAAAGAAGCGATTGAATGTGCCGTGCCATATGAAATGCAGAATTTGAACTAATCCACAAAGTTTTTAGTCTTAAGAG : ATATCTTTCCAACATTACTTGACCCTCTCCTCGAGACTTTATGCATCT : GTGACAGGTTGGTTGATGAAATGTTTCATTGTTTACTTGGAA</gDNA_template>
            <first_frame> N  M  T  R  F  I  S  L  T  N  L  E  S  K  *  N  S  R  N  M  E  I  M  :  I  I  I  A  F  T  Y  R  R  N  G  M  L  I  G  C  K  Y  R  T  L  E  K  R  F  W  Q  :  E  K  G  A  D  K  V  L  Y  G  L  D  D  V  R  E  A  D  E  I  I  I  :  V  E  G  E  I  D  K  L  S  V  E  E  A  G  F  P  N  C  V  S  V  P  N  G  A  P  Q  G  I  A  S  K  E  L  L  P  L  E  E  :  T  G  Y  Q  I  F  I  P  V  E  L  Q  *  V  L  G  E   : G  V  P  D  C  A  G  N  *  W  *  F  T  R  P  S  I  G  *  R  A  C  P  P  S  G  E  R  K  :  V  L  A  S  M  L  A  E  K  E  *  V  K  Q  L  *  R  C  K  *   : G  T  C  *  S  G  K  R  S  S  E  R  S  D  *  M  C  R  A  I  *  N  A  E  F  E  L  I  H  K  V  F  S  L  K  R :   Y  L  S  N  I  T  *  P  S  P  R  D  F  M  H  L :   *  Q  V  G  *  *  N  V  S  L  F  T  W   </first_frame>
            <second_frame>  I  *  Q  G  S  *  V  S  L  T  W  K  A  S  K  T  Q  E  T  W  R  S  * :   S  S  L  P  S  L  I  D  G  M  V  C  S  S  A  A  S  I  G  L  L  R  K  G  F  G  R :   R  R  V  L  I  R  Y  Y  M  D  W  M  M  *  E  K  Q  M  R  S  S  L :   *  K  V  K  *  I  S  F  Q  W  K  K  L  D  F  L  T  V  S  V  F  L  M  V  H  H  R  A  S  H  P  K  N  C  Y  H  W  K  R :   Q  D  T  R  F  S  Y  L  W  N  C  N  E  C  L  E  K  :  A  S  R  I  V  L  A  T  D  G  D  L  P  G  Q  A  L  A  E  E  L  A  R  R  L  G  K  E  R :   C  W  Q  V  C  W  P  K  K  N  E  L  S  S  Y  K  D  A  N  E  :  V  L  V  N  L  G  R  E  A  L  K  E  A  I  E  C  A  V  P  Y  E  M  Q  N  L  N  *  S  T  K  F  L  V  L  R   : D  I  F  P  T  L  L  D  P  L  L  E  T  L  C  I   : C  D  R  L  V  D  E  M  F  H  C  L  L  G  </second_frame>
            <third_frame>   Y  D  K  V  H  K  S  H  *  L  G  K  Q  V  K  L  K  K  H  G  D  H   : D  H  H  C  L  H  L  *  T  E  W  Y  A  H  R  L  Q  V  *  D  S  *  E  K  V  L  A   : G  E  G  C  *  *  G  T  I  W  T  G  *  C  K  R  S  R  *  D  H  H   : C  R  R  *  N  R  *  A  F  S  G  R  S  W  I  S  *  L  C  Q  C  S  *  W  C  T  T  G  H  R  I  Q  R  T  A  T  T  G  R   : D  R  I  P  D  F  H  T  C  G  T  A  M  S  A  W  R  R :   R  P  G  L  C  W  Q  L  M  V  I  Y  Q  A  K  H  W  L  K  S  L  P  A  V  W  G  K  K   : G  V  G  K  Y  V  G  R  K  R  M  S  *  A  V  I  K  M  Q  M  R :   Y  L  L  I  W  E  E  K  L  *  K  K  R  L  N  V  P  C  H  M  K  C  R  I  *  T  N  P  Q  S  F  *  S  *  E  :  I  S  F  Q  H  Y  L  T  L  S  S  R  L  Y  A  S  :  V  T  G  W  L  M  K  C  F  I  V  Y  L  E </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0064E19.2" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="90062" stop="89962"/>
                    <exon start="89848" stop="89797"/>
                    <exon start="89695" stop="89610"/>
                    <exon start="87862" stop="87802"/>
                    <exon start="86590" stop="86510"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>378</number_coding_nucleotides>
                  <number_encoded_amino_acids>126</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ISFQWKKLDFLTVSVFLMVHHRASHPKNCYHWKRQDTRFSYLWNCNECLEKASRIVLATDGDLPGQALAEELARRLGKERCWQVCWPKKNELSSYKDANEVLVNLGREALKEAIECAVPYEMQNLN*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0064E19.2" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="92418" stop="92395"/>
                    <exon start="92280" stop="92200"/>
                    <exon start="90223" stop="90158"/>
                    <exon start="90078" stop="89962"/>
                    <exon start="89848" stop="89810"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>324</number_coding_nucleotides>
                  <number_encoded_amino_acids>108</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NSRNMEIMIIIAFTYRRNGMLIGCKYRTLEKRFWQEKGADKVLYGLDDVREADEIIIVEGEIDKLSVEEAGFPNCVSVPNGAPQGIASKELLPLEETGYQIFIPVELQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="87313" e_stop="86762"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.900"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.900">
            <gDNA_exon_boundary e_start="87313" e_stop="86762" e_length="552"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="87313" stop="86762"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E418137" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CATCAACTCAGGGCATGATCAGAGATTTAATTCTTTAGGTGATAGCTCAGGTATATAGGTTCGATTCCCATTACCAGTGGGCTAGTACTCAGGTTAGCCTTTTTTTGGTTTTAATCAAGAAGTTATCTGGCAGCCTTCTGAGTATTTGAGCATCAGAGTTAACTTTGACAACTAAAAGGAATTGAAAGGATATTAGAGGCGCTGATCATGTACTAAGAACATGCTTGCAGATCTTACTCATCTGGTAGATATATCAATGTATAGATAGAGATTAATCATTTTATAAGAAGAATTAAAAAAAAAAAAGCAGCAGGAAATGCAGTTGACATCCCCCTAAAACTATGTGGTCCTTTATTGTTCACTCTGTGGATGGCCTGCATTTGTCCAAGTCCAGTGTTTAGTTTATAAGGGATTTCATGTGCACCTTGGATATTCAATCAATGCTTCCGTTATTCAATCTGGTGCACATCAGGTAATTTTATGGCACTGTAATTAGAATGTTGGAGAAGTTCCCTGAAGTTTATATTACTGTATTTGTTACTATTATTTTTA</gDNA_template>
            <first_frame> H  Q  L  R  A  *  S  E  I  *  F  F  R  *  *  L  R  Y  I  G  S  I  P  I  T  S  G  L  V  L  R  L  A  F  F  W  F  *  S  R  S  Y  L  A  A  F  *  V  F  E  H  Q  S  *  L  *  Q  L  K  G  I  E  R  I  L  E  A  L  I  M  Y  *  E  H  A  C  R  S  Y  S  S  G  R  Y  I  N  V  *  I  E  I  N  H  F  I  R  R  I  K  K  K  K  A  A  G  N  A  V  D  I  P  L  K  L  C  G  P  L  L  F  T  L  W  M  A  C  I  C  P  S  P  V  F  S  L  *  G  I  S  C  A  P  W  I  F  N  Q  C  F  R  Y  S  I  W  C  T  S  G  N  F  M  A  L  *  L  E  C  W  R  S  S  L  K  F  I  L  L  Y  L  L  L  L  F  L </first_frame>
            <second_frame>  I  N  S  G  H  D  Q  R  F  N  S  L  G  D  S  S  G  I  *  V  R  F  P  L  P  V  G  *  Y  S  G  *  P  F  F  G  F  N  Q  E  V  I  W  Q  P  S  E  Y  L  S  I  R  V  N  F  D  N  *  K  E  L  K  G  Y  *  R  R  *  S  C  T  K  N  M  L  A  D  L  T  H  L  V  D  I  S  M  Y  R  *  R  L  I  I  L  *  E  E  L  K  K  K  K  Q  Q  E  M  Q  L  T  S  P  *  N  Y  V  V  L  Y  C  S  L  C  G  W  P  A  F  V  Q  V  Q  C  L  V  Y  K  G  F  H  V  H  L  G  Y  S  I  N  A  S  V  I  Q  S  G  A  H  Q  V  I  L  W  H  C  N  *  N  V  G  E  V  P  *  S  L  Y  Y  C  I  C  Y  Y  Y  F   </second_frame>
            <third_frame>   S  T  Q  G  M  I  R  D  L  I  L  *  V  I  A  Q  V  Y  R  F  D  S  H  Y  Q  W  A  S  T  Q  V  S  L  F  L  V  L  I  K  K  L  S  G  S  L  L  S  I  *  A  S  E  L  T  L  T  T  K  R  N  *  K  D  I  R  G  A  D  H  V  L  R  T  C  L  Q  I  L  L  I  W  *  I  Y  Q  C  I  D  R  D  *  S  F  Y  K  K  N  *  K  K  K  S  S  R  K  C  S  *  H  P  P  K  T  M  W  S  F  I  V  H  S  V  D  G  L  H  L  S  K  S  S  V  *  F  I  R  D  F  M  C  T  L  D  I  Q  S  M  L  P  L  F  N  L  V  H  I  R  *  F  Y  G  T  V  I  R  M  L  E  K  F  P  E  V  Y  I  T  V  F  V  T  I  I  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLm0064E19.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="95597" e_stop="95485"/>
            <exon e_start="95076" e_stop="94949"/>
            <exon e_start="94366" e_stop="94311"/>
            <exon e_start="94229" e_stop="94178"/>
            <exon e_start="94086" e_stop="93979"/>
            <exon e_start="92280" e_stop="92200"/>
            <exon e_start="90223" e_stop="90158"/>
            <exon e_start="90078" e_stop="89962"/>
            <exon e_start="89844" e_stop="89793"/>
            <exon e_start="89695" e_stop="89645"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.996" e_score="0.947"/>
          <exon-intron don_prob="0.997" acc_prob="0.993" e_score="0.969"/>
          <exon-intron don_prob="0.966" acc_prob="0.775" e_score="0.946"/>
          <exon-intron don_prob="0.932" acc_prob="0.996" e_score="0.981"/>
          <exon-intron don_prob="0.945" acc_prob="0.986" e_score="0.944"/>
          <exon-intron don_prob="0.920" acc_prob="0.998" e_score="0.975"/>
          <exon-intron don_prob="0.999" acc_prob="0.992" e_score="0.985"/>
          <exon-intron don_prob="0.998" acc_prob="0.069" e_score="0.957"/>
          <exon-intron don_prob="0.000" acc_prob="1.000" e_score="0.865"/>
          <exon-only e_score="0.784"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.947">
            <gDNA_exon_boundary e_start="95597" e_stop="95485" e_length="113"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.996">
            <gDNA_intron_boundary i_start="95484" i_stop="95077" i_length="408"/>
          </intron>
          <exon e_serial="2" e_score="0.969">
            <gDNA_exon_boundary e_start="95076" e_stop="94949" e_length="128"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.993">
            <gDNA_intron_boundary i_start="94948" i_stop="94367" i_length="582"/>
          </intron>
          <exon e_serial="3" e_score="0.946">
            <gDNA_exon_boundary e_start="94366" e_stop="94311" e_length="56"/>
          </exon>
          <intron i_serial="3" don_prob="0.966" acc_prob="0.775">
            <gDNA_intron_boundary i_start="94310" i_stop="94230" i_length="81"/>
          </intron>
          <exon e_serial="4" e_score="0.981">
            <gDNA_exon_boundary e_start="94229" e_stop="94178" e_length="52"/>
          </exon>
          <intron i_serial="4" don_prob="0.932" acc_prob="0.996">
            <gDNA_intron_boundary i_start="94177" i_stop="94087" i_length="91"/>
          </intron>
          <exon e_serial="5" e_score="0.944">
            <gDNA_exon_boundary e_start="94086" e_stop="93979" e_length="108"/>
          </exon>
          <intron i_serial="5" don_prob="0.945" acc_prob="0.986">
            <gDNA_intron_boundary i_start="93978" i_stop="92281" i_length="1698"/>
          </intron>
          <exon e_serial="6" e_score="0.975">
            <gDNA_exon_boundary e_start="92280" e_stop="92200" e_length="81"/>
          </exon>
          <intron i_serial="6" don_prob="0.920" acc_prob="0.998">
            <gDNA_intron_boundary i_start="92199" i_stop="90224" i_length="1976"/>
          </intron>
          <exon e_serial="7" e_score="0.985">
            <gDNA_exon_boundary e_start="90223" e_stop="90158" e_length="66"/>
          </exon>
          <intron i_serial="7" don_prob="0.999" acc_prob="0.992">
            <gDNA_intron_boundary i_start="90157" i_stop="90079" i_length="79"/>
          </intron>
          <exon e_serial="8" e_score="0.957">
            <gDNA_exon_boundary e_start="90078" e_stop="89962" e_length="117"/>
          </exon>
          <intron i_serial="8" don_prob="0.998" acc_prob="0.069">
            <gDNA_intron_boundary i_start="89961" i_stop="89845" i_length="117"/>
          </intron>
          <exon e_serial="9" e_score="0.865">
            <gDNA_exon_boundary e_start="89844" e_stop="89793" e_length="52"/>
          </exon>
          <intron i_serial="9" don_prob="0.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="89792" i_stop="89696" i_length="97"/>
          </intron>
          <exon e_serial="10" e_score="0.784">
            <gDNA_exon_boundary e_start="89695" e_stop="89645" e_length="51"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95597" stop="95485"/>
              <exon start="95076" stop="94949"/>
              <exon start="94366" stop="94311"/>
              <exon start="94229" stop="94178"/>
              <exon start="94086" stop="93979"/>
              <exon start="92280" stop="92200"/>
              <exon start="90223" stop="90158"/>
              <exon start="90078" stop="89962"/>
              <exon start="89844" stop="89793"/>
              <exon start="89695" stop="89645"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E598745" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTCAACTCTCTTTAGAGCTCGTCCTGTTATACTCTACACTTTCATCTCAAGATTTTCGCCTAACAGTCATGGTTTTCTTACTATTACTCCTACTAGGCTCTTCACACCTGCAG : CTAGTTTGAGGAGAGATGAAAATAAGGAGGTGGATGATTATGCTGAACTGAAGGAGAAAGTGGAGAATTTTGGTATATGCTGCAATTCTGTTACTCCTGAAGAATACACAAGATTAATGTGTCCCAAG : TGTAAAGGTGGTCGGTCAATGGAAAAGAGTTTATCATTTCATATGTCCTCGAAAAG : GAATTCTGCATTATGGAGGTGTTTCAATATTGACTGTGGATGGGCAGGCCAG : ATCCCACACAATAGTGCGGCATCTGATGGGGTCCATCAACGTGGCAGAATAAATTTTCCTCGGATACTTACAGAGGAAAGCTTGAACTTAGAACCATTAGGTGATATG : ATCATCATTGCCTTCACTTATAGACGGAATGGTATGCTCATCGGCTGCAAGTATAGGACTCTTGAGAAAAGGTTTTGGCAG : GAGAAGGGTGCTGATAAGGTACTATATGGACTGGATGATGTAAGAGAAGCAGATGAGATCATCATT : GTAGAAGGTGAAATAGATAAGCTTTCAGTGGAAGAAGCTGGATTTCCTAACTGTGTCAGTGTTCCTAATGGTGCACCACAGGGCATCGCATCCAAAGAACTGCTACCACTGGAAGAG : GATACCAGATTTTCATACCTGTGGAACTGCAATGAGTGCTTGGAGAAGGTTG : GCGTCCCGGATTGTGCTGGCAACTGATGGTGATTTACCAGGCCAAGCATTG</gDNA_template>
            <first_frame> V  N  S  L  *  S  S  S  C  Y  T  L  H  F  H  L  K  I  F  A  *  Q  S  W  F  S  Y  Y  Y  S  Y  *  A  L  H  T  C  S :   *  F  E  E  R  *  K  *  G  G  G  *  L  C  *  T  E  G  E  S  G  E  F  W  Y  M  L  Q  F  C  Y  S  *  R  I  H  K  I  N  V  S  Q   : V  *  R  W  S  V  N  G  K  E  F  I  I  S  Y  V  L  E  K  :  E  F  C  I  M  E  V  F  Q  Y  *  L  W  M  G  R  P   : D  P  T  Q  *  C  G  I  *  W  G  P  S  T  W  Q  N  K  F  S  S  D  T  Y  R  G  K  L  E  L  R  T  I  R  *  Y   : D  H  H  C  L  H  L  *  T  E  W  Y  A  H  R  L  Q  V  *  D  S  *  E  K  V  L  A   : G  E  G  C  *  *  G  T  I  W  T  G  *  C  K  R  S  R  *  D  H  H   : C  R  R  *  N  R  *  A  F  S  G  R  S  W  I  S  *  L  C  Q  C  S  *  W  C  T  T  G  H  R  I  Q  R  T  A  T  T  G  R   : G  Y  Q  I  F  I  P  V  E  L  Q  *  V  L  G  E  G  W :   R  P  G  L  C  W  Q  L  M  V  I  Y  Q  A  K  H   </first_frame>
            <second_frame>  S  T  L  F  R  A  R  P  V  I  L  Y  T  F  I  S  R  F  S  P  N  S  H  G  F  L  T  I  T  P  T  R  L  F  T  P  A   : A  S  L  R  R  D  E  N  K  E  V  D  D  Y  A  E  L  K  E  K  V  E  N  F  G  I  C  C  N  S  V  T  P  E  E  Y  T  R  L  M  C  P  K  :  C  K  G  G  R  S  M  E  K  S  L  S  F  H  M  S  S  K  R :   N  S  A  L  W  R  C  F  N  I  D  C  G  W  A  G  Q  :  I  P  H  N  S  A  A  S  D  G  V  H  Q  R  G  R  I  N  F  P  R  I  L  T  E  E  S  L  N  L  E  P  L  G  D  M  :  I  I  I  A  F  T  Y  R  R  N  G  M  L  I  G  C  K  Y  R  T  L  E  K  R  F  W  Q  :  E  K  G  A  D  K  V  L  Y  G  L  D  D  V  R  E  A  D  E  I  I  I  :  V  E  G  E  I  D  K  L  S  V  E  E  A  G  F  P  N  C  V  S  V  P  N  G  A  P  Q  G  I  A  S  K  E  L  L  P  L  E  E  :  D  T  R  F  S  Y  L  W  N  C  N  E  C  L  E  K  V   : G  V  P  D  C  A  G  N  *  W  *  F  T  R  P  S  I  </second_frame>
            <third_frame>   Q  L  S  L  E  L  V  L  L  Y  S  T  L  S  S  Q  D  F  R  L  T  V  M  V  F  L  L  L  L  L  L  G  S  S  H  L  Q  :  L  V  *  G  E  M  K  I  R  R  W  M  I  M  L  N  *  R  R  K  W  R  I  L  V  Y  A  A  I  L  L  L  L  K  N  T  Q  D  *  C  V  P  S :   V  K  V  V  G  Q  W  K  R  V  Y  H  F  I  C  P  R  K   : G  I  L  H  Y  G  G  V  S  I  L  T  V  D  G  Q  A  R :   S  H  T  I  V  R  H  L  M  G  S  I  N  V  A  E  *  I  F  L  G  Y  L  Q  R  K  A  *  T  *  N  H  *  V  I  * :   S  S  L  P  S  L  I  D  G  M  V  C  S  S  A  A  S  I  G  L  L  R  K  G  F  G  R :   R  R  V  L  I  R  Y  Y  M  D  W  M  M  *  E  K  Q  M  R  S  S  L :   *  K  V  K  *  I  S  F  Q  W  K  K  L  D  F  L  T  V  S  V  F  L  M  V  H  H  R  A  S  H  P  K  N  C  Y  H  W  K  R :   I  P  D  F  H  T  C  G  T  A  M  S  A  W  R  R  L  :  A  S  R  I  V  L  A  T  D  G  D  L  P  G  Q  A  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0064E19.2" strand="-"/>
                <serials PGL_serial="14" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="95596" stop="95485"/>
                    <exon start="95076" stop="94949"/>
                    <exon start="94366" stop="94311"/>
                    <exon start="94229" stop="94178"/>
                    <exon start="94086" stop="93979"/>
                    <exon start="92280" stop="92200"/>
                    <exon start="90223" stop="90158"/>
                    <exon start="90078" stop="89962"/>
                    <exon start="89844" stop="89793"/>
                    <exon start="89695" stop="89670"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>795</number_coding_nucleotides>
                  <number_encoded_amino_acids>265</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>STLFRARPVILYTFISRFSPNSHGFLTITPTRLFTPAASLRRDENKEVDDYAELKEKVENFGICCNSVTPEEYTRLMCPKCKGGRSMEKSLSFHMSSKRNSALWRCFNIDCGWAGQIPHNSAASDGVHQRGRINFPRILTEESLNLEPLGDMIIIAFTYRRNGMLIGCKYRTLEKRFWQEKGADKVLYGLDDVREADEIIIVEGEIDKLSVEEAGFPNCVSVPNGAPQGIASKELLPLEEDTRFSYLWNCNECLEKVGVPDCAGN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="+" PGL_start="96515" PGL_stop="97391"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="96515" e_stop="97391"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="96515" e_stop="97391" e_length="877"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="96515" stop="97186"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E379757" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="96524" stop="96855"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E201272" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="96671" stop="97391"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E380019" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAATAAAAACCATATTTGTTGTACACTAGTGACATAAACTCAAGTTTGATACTTTTATCAGTTGGTAAAAATGTAAGCAAGCAAAGAAGTAGTGAAGGCCGGAATGAGATGTCATATGTAGTATACAATCTGATGACACTACTTGCTAGGTCTCCACTACAAGAACTAGCCATAATGTGTTCTCCCTGTATGGAGATATATCAGTCATTTGCATTTGCAGAGGCAAGATTGCATCTTCAGAGTTTCTCATAAGATTTTACTTTTCTGTGCCAGTAGTAGCATCTCCATCCATGCTATTCTTCTTTTTCTTTCCATCACCATGTCTGGACCTTCTAGGGGCTTCATCCTCGCTCTCGCTTTCATCATTTCTAAAGCTGTTTTCAGTTTGTGGATAATGTACTCCTTCATCTGGTCCAACAACTGAGCCTGCAGTCTCTTGACCCCTACCTTGGTCTGGACCTGAACTGAATCTATCGTTCCTTTCATTAAAAGGAGCTCGCTGATCCTTTTTGACCCGAGGATTTTGAGAGGGCGGTGGTGGGGGTGGTGTAAATGATGGATGCATTCCCATTGGTCGACCACCTCTGGGTGGGCCAGGTGCTCCAGGACCCATTCCACCCATGAAAGGGGGCCTTGCTGGACCCATCATCATCCCAAATCCACCAGCAGCCGGAGGACGGCTGTGAAACATCATATCACCAGGGAATCGAGGGCCAAATGGTCCAAAAGGTCGGCCACCCATTCCATAAGGATCAGGCATAGGAAAACCATCAGGTGTCATTGATCCATAAGAAAATCCATCACTCATAATGCCTGGGGGGAAGCCCCGCATCCCAGGGAAAGGCCTGGCTCCACGAAAAGGAACTAGAGGAGGCC</gDNA_template>
            <first_frame> K  I  K  T  I  F  V  V  H  *  *  H  K  L  K  F  D  T  F  I  S  W  *  K  C  K  Q  A  K  K  *  *  R  P  E  *  D  V  I  C  S  I  Q  S  D  D  T  T  C  *  V  S  T  T  R  T  S  H  N  V  F  S  L  Y  G  D  I  S  V  I  C  I  C  R  G  K  I  A  S  S  E  F  L  I  R  F  Y  F  S  V  P  V  V  A  S  P  S  M  L  F  F  F  F  F  P  S  P  C  L  D  L  L  G  A  S  S  S  L  S  L  S  S  F  L  K  L  F  S  V  C  G  *  C  T  P  S  S  G  P  T  T  E  P  A  V  S  *  P  L  P  W  S  G  P  E  L  N  L  S  F  L  S  L  K  G  A  R  *  S  F  L  T  R  G  F  *  E  G  G  G  G  G  G  V  N  D  G  C  I  P  I  G  R  P  P  L  G  G  P  G  A  P  G  P  I  P  P  M  K  G  G  L  A  G  P  I  I  I  P  N  P  P  A  A  G  G  R  L  *  N  I  I  S  P  G  N  R  G  P  N  G  P  K  G  R  P  P  I  P  *  G  S  G  I  G  K  P  S  G  V  I  D  P  *  E  N  P  S  L  I  M  P  G  G  K  P  R  I  P  G  K  G  L  A  P  R  K  G  T  R  G  G  </first_frame>
            <second_frame>  K  *  K  P  Y  L  L  Y  T  S  D  I  N  S  S  L  I  L  L  S  V  G  K  N  V  S  K  Q  R  S  S  E  G  R  N  E  M  S  Y  V  V  Y  N  L  M  T  L  L  A  R  S  P  L  Q  E  L  A  I  M  C  S  P  C  M  E  I  Y  Q  S  F  A  F  A  E  A  R  L  H  L  Q  S  F  S  *  D  F  T  F  L  C  Q  *  *  H  L  H  P  C  Y  S  S  F  S  F  H  H  H  V  W  T  F  *  G  L  H  P  R  S  R  F  H  H  F  *  S  C  F  Q  F  V  D  N  V  L  L  H  L  V  Q  Q  L  S  L  Q  S  L  D  P  Y  L  G  L  D  L  N  *  I  Y  R  S  F  H  *  K  E  L  A  D  P  F  *  P  E  D  F  E  R  A  V  V  G  V  V  *  M  M  D  A  F  P  L  V  D  H  L  W  V  G  Q  V  L  Q  D  P  F  H  P  *  K  G  A  L  L  D  P  S  S  S  Q  I  H  Q  Q  P  E  D  G  C  E  T  S  Y  H  Q  G  I  E  G  Q  M  V  Q  K  V  G  H  P  F  H  K  D  Q  A  *  E  N  H  Q  V  S  L  I  H  K  K  I  H  H  S  *  C  L  G  G  S  P  A  S  Q  G  K  A  W  L  H  E  K  E  L  E  E  A </second_frame>
            <third_frame>   N  K  N  H  I  C  C  T  L  V  T  *  T  Q  V  *  Y  F  Y  Q  L  V  K  M  *  A  S  K  E  V  V  K  A  G  M  R  C  H  M  *  Y  T  I  *  *  H  Y  L  L  G  L  H  Y  K  N  *  P  *  C  V  L  P  V  W  R  Y  I  S  H  L  H  L  Q  R  Q  D  C  I  F  R  V  S  H  K  I  L  L  F  C  A  S  S  S  I  S  I  H  A  I  L  L  F  L  S  I  T  M  S  G  P  S  R  G  F  I  L  A  L  A  F  I  I  S  K  A  V  F  S  L  W  I  M  Y  S  F  I  W  S  N  N  *  A  C  S  L  L  T  P  T  L  V  W  T  *  T  E  S  I  V  P  F  I  K  R  S  S  L  I  L  F  D  P  R  I  L  R  G  R  W  W  G  W  C  K  *  W  M  H  S  H  W  S  T  T  S  G  W  A  R  C  S  R  T  H  S  T  H  E  R  G  P  C  W  T  H  H  H  P  K  S  T  S  S  R  R  T  A  V  K  H  H  I  T  R  E  S  R  A  K  W  S  K  R  S  A  T  H  S  I  R  I  R  H  R  K  T  I  R  C  H  *  S  I  R  K  S  I  T  H  N  A  W  G  E  A  P  H  P  R  E  R  P  G  S  T  K  R  N  *  R  R   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0064E19.2" strand="+"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="96691" stop="96939"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>246</number_coding_nucleotides>
                  <number_encoded_amino_acids>82</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CVLPVWRYISHLHLQRQDCIFRVSHKILLFCASSSISIHAILLFLSITMSGPSRGFILALAFIISKAVFSLWIMYSFIWSNN*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0064E19.2" strand="+"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="96665" stop="96910"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>243</number_coding_nucleotides>
                  <number_encoded_amino_acids>81</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VSTTRTSHNVFSLYGDISVICICRGKIASSEFLIRFYFSVPVVASPSMLFFFFFPSPCLDLLGASSSLSLSSFLKLFSVCG*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0064E19.2" strand="+"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="96522" stop="96767"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>243</number_coding_nucleotides>
                  <number_encoded_amino_acids>81</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KPYLLYTSDINSSLILLSVGKNVSKQRSSEGRNEMSYVVYNLMTLLARSPLQELAIMCSPCMEIYQSFAFAEARLHLQSFS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0064E19.2" strand="+"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="4"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="97072" stop="97299"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>225</number_coding_nucleotides>
                  <number_encoded_amino_acids>75</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>WMHSHWSTTSGWARCSRTHSTHERGPCWTHHHPKSTSSRRTAVKHHITRESRAKWSKRSATHSIRIRHRKTIRCH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 242 chains have been computed
$ 
$ memory statistics:
$ 280872 bytes spliced alignments in total
$ 65 spliced alignments have been stored
$ 4321 bytes was the average size of a spliced alignment
$ 24384 bytes predicted gene locations in total
$ 15 predicted gene locations have been stored
$ 1625 bytes was the average size of a predicted gene location
$ 3 megabytes was the average size of the backtrace matrix
$ 337 backtrace matrices have been allocated
$ 
$ date finished: 2009-12-01 11:38:06
-->
