<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-07-29 10:44:43"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E223449" ref_strand="+" ref_description="SGN-E223449 [cLEL-14-I9](-)">
      <seq>tcaagggaagataggtgcaagcacaggtggacgctaaagctacaggttcgttgttgcagctatccggacatcagtattcatccggagtttggtaggtcctcatgctttcgaggatgctaccgttttacattctagcgtagttttagagttgagctagcggagcatgttccactagcgtttctttcctgttttggttcaaactttgtattggcgctattttggccgatatacaagtaatacttaatgaattatttctttcagttgcttaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="20699" stop="57104"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21002" g_stop="21276" g_length="275"/>
          <reference_exon_boundary r_type="cDNA" r_start="15" r_stop="289" r_length="275" r_score="0.920"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E223449" ref_strand="+">
        <total_alignment_score>0.920</total_alignment_score>
        <cumulative_length_of_scored_exons>275</cumulative_length_of_scored_exons>
        <coverage percentage="0.952" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E223449" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21002" e_stop="21276"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGCAGGCACAGGTGGACGCTAGAGCTACAGGTTCGTTGTTGCAGCTATCCGGACATCAGTATTCATCCGGAGTTTGGTAGGTCCTCATGCTTTCGAGGATGCTACTGTTTTACATTCTAGCGTAGTTTTAGAGTTGAGCTAGCGGAACATGTTCCACTAGCGTTTCTTTCCTGTTTTGGTTCAAACTTTGTATTGGTGCTATTTTGGCCGATATACAATTAATACTTAATGAATTATTTCTTTCAGTTGCTTATCTCTTAAATGTTAGATGGTT</genome_strand>
        <mrna_strand>GTGCAAGCACAGGTGGACGCTAAAGCTACAGGTTCGTTGTTGCAGCTATCCGGACATCAGTATTCATCCGGAGTTTGGTAGGTCCTCATGCTTTCGAGGATGCTACCGTTTTACATTCTAGCGTAGTTTTAGAGTTGAGCTAGCGGAGCATGTTCCACTAGCGTTTCTTTCCTGTTTTGGTTCAAACTTTGTATTGGCGCTATTTTGGCCGATATACAAGTAATACTTAATGAATTATTTCTTTCAGTTGCTTAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E335305" ref_strand="+" ref_description="SGN-E335305 [cTOE-1-P17]">
      <seq>tcaaacacaaacaagtaaaaaatttgatttacatacttcacttctaaagctatactctgatcttattgatcttttggtttgtatatataatcctgaagcccaaacaaggtcttgcattctttgacccttgtgcatcccagtgtccccttcaaaattgttgatattgaaaggtccatatttgatacaccagttaactctggtttttatgatgttgtatatttgcatgcagtgaggatgacctgctttgcccagaatacatctctggtggggttcatctgagttcccttaacaaattgagtgcaaacaattgttcattcaagctttcaggatacatctcangtcctgatgtttacccagtggaagtatacaatgtggtgacggactgacggtttattttcagtcgaaaggccaagtatgaaatgaaacttgttaacatttggaatagcaaattacaagct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="45014" stop="46350"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45314" g_stop="45565" g_length="252"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="252" r_length="252" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="45566" i_stop="45666" i_length="101">
            <donor d_prob="0.769" d_score="1.00"/>
            <acceptor a_prob="0.412" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="45667" g_stop="45784" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="253" r_stop="370" r_length="118" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="45785" i_stop="45863" i_length="79">
            <donor d_prob="0.668" d_score="0.98"/>
            <acceptor a_prob="0.966" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="45864" g_stop="45900" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="371" r_stop="407" r_length="37" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="45901" i_stop="45999" i_length="99">
            <donor d_prob="0.730" d_score="0.00"/>
            <acceptor a_prob="0.945" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="46000" g_stop="46050" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="408" r_stop="458" r_length="51" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E335305" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>458</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E335305" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45314" e_stop="45565"/>
          <exon e_start="45667" e_stop="45784"/>
          <exon e_start="45864" e_stop="45900"/>
          <exon e_start="46000" e_stop="46050"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAACACAAACAAGTAAAAAATTTGATTTACATACTTCACTTCTAAAGCTATACTCTGATCTTATTGATCTTTTGGTTTGTATATATAATCCTGAAGCCCAAACAAGGTCTTGCATTCTTTGACCCTTGTGCATCCCAGTGTCCCCTTCAAAATTGTTGATATTGAAAGGTCCATATTTGATACACCAGTTAACTCTGGTTTTTATGATGTTGTATATTTGCATGCAGTGAGGATGACCTGCTTTGCCCAGGTGCTTCTCCTTCTCCGTTGCACTATTGTCCAGTGGGTTTAGGATTCATCTGAGTTCCCTTAACTAATTGAGTGCAAGCAATTGTTCATTCATACTTTCAGAATACATCTCTGGTGGGGTTCATCTGAGTTCCCTTAACAAATTGAGTGCAAACAATTGTTCATTCAAGCTTTCAGGATACATCTCAGGTCCTGATGTTTACCCAGTGGAAGTATACAAGTATGGATAAAAGGATGTGATAAGTTATCTTTTCTACACTTTCTTTGATTCTAGCATTTAACTTCATTGAACATTACAGTGTGGTGACGGACTGACGGTTTATTTTCAGTCGAAAGGTAATGTTATTAAATTTCTTCGGAGGGTTAGGTGTCTTGCTGATATTATCTCAATCAAATATGTTAGTAACTCTCACAACCTGATGTTTCTCTTATCAGGCCAAGTATGAAATGAAACTTGTTAACATTTGGAATAGCAAATTACAAGCT</genome_strand>
        <mrna_strand>TCAAACACAAACAAGTAAAAAATTTGATTTACATACTTCACTTCTAAAGCTATACTCTGATCTTATTGATCTTTTGGTTTGTATATATAATCCTGAAGCCCAAACAAGGTCTTGCATTCTTTGACCCTTGTGCATCCCAGTGTCCCCTTCAAAATTGTTGATATTGAAAGGTCCATATTTGATACACCAGTTAACTCTGGTTTTTATGATGTTGTATATTTGCATGCAGTGAGGATGACCTGCTTTGCCCAG.....................................................................................................AATACATCTCTGGTGGGGTTCATCTGAGTTCCCTTAACAAATTGAGTGCAAACAATTGTTCATTCAAGCTTTCAGGATACATCTCANGTCCTGATGTTTACCCAGTGGAAGTATACAA...............................................................................TGTGGTGACGGACTGACGGTTTATTTTCAGTCGAAAG...................................................................................................GCCAAGTATGAAATGAAACTTGTTAACATTTGGAATAGCAAATTACAAGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E745916" ref_strand="+" ref_description="SGN-E745916 [GI|47105486]">
      <seq>ggaagaaggaagagcttagctaagaactctagaggttgcgagaagatattattgtagcaatggaggcggtgagaaggaggagctttggttggccgacaatggcggtggtgctaacatgcgctttgctcgtgatgctgcctcaagtgtactcgattcggtacattgtgggatcgagattcgggtggactaacagtgtcaattacaccaattgggctaaggacaaacatttctacaacggagactggctcttttttgtgtatgacaggaaccagatgaatgtgcttgagctaaacaagacagactacgagagctgcaatactgatcatcctctccacaattggactactggagcaggaagggacgttgttccgcttaatgtgattaaaacctactatttcgctagtggaaaaggatactgttatggaggcatgaaagtggctattcatgttgaaaaggcacctccacctccaaaagctgctccagtacgcagcagttcaacaaatttgctcaactcatttaaagcacagataatgataccagctcttttcgcaaccgctgctgtgtgggatgcatttcttctgctctggtaggatggttaagtgaaccatacatgctggatgcttcagataattagttaaaccaagtgtcaagaaagtgtttagatttattttttgtgtgcttgtattttcttttttcttgaaagttaccatctttttttttttttaccaccaagtgccattatcatttgacctgaaaatcaattttttatttcagaacaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="48383" stop="51559"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48682" g_stop="48930" g_length="249"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="249" r_length="249" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="48931" i_stop="50728" i_length="1798">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.854" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50729" g_stop="51258" g_length="530"/>
          <reference_exon_boundary r_type="cDNA" r_start="250" r_stop="779" r_length="530" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="780" polyA_stop="795"/>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E745916" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>779</cumulative_length_of_scored_exons>
        <coverage percentage="0.980" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E745916" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48682" e_stop="48930"/>
          <exon e_start="50729" e_stop="51258"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAGAAGGAAGAGCTTAGCTAAGAACTCTAGAGGTTGCGAGAAGATATTATTGTAGCAATGGAGGCGGTGAGAAGGAGGAGCTTTGGTTGGCCGACAATGGCGGTGGTGCTAACATGCGCTTTGCTCGTGATGCTGCCTCAAGTGTACTCGATTCGGTACATTGTGGGATCGAGATTCGGGTGGACTAACAGTGTCAATTACACCAATTGGGCTAAGGACAAACATTTCTACAACGGAGACTGGCTCTGTAAGCTCTAGATCTACTCTTCTTTCAGCTCATTCTTAAGATTTTCTTCTGTTCTTAGCTTGTTTCTACTAATAAGAAATTTGTCTGGATCTTAGATATACCCGGGGTTTAGTATAAATATGAGTATAATTTTGTTTCTATAGTTGGAGCTTGGAGCCTTAGTTTTCTGTTTAAGCTCTGTGGTTTACGCTGGGTTTCATTTATTTGCTTGCTGCTTTCTATAATTGGAGCTCTGCCTTTTCCGGTGCTCATTAGTAGGAGTGAACTTTCGGAAACTTTGATTGACTAGATGGTGCTAGATGGTGAAGGTCTGGTGTAAATTGCCTTTTTTTTTTTCTGTGAAGGAGTGAATTAGTTTCTAAGTAGAATTCTTCTGTGTCGTTCAGATCTATGTTTTTAGCTTGCATTTAGAATGGCATTTACTCTGTTTATACCTAATTTGAATTATAGAGTTTCCAGCTGGGCATTTTCGGTGATGAAAGTTTGAAGTTTTTCCTTTTTATGACTGCTTTTAGCTGGCAGCTTCTTCATAAAGGCAATGGTGTTCCGTTTGAAATTAAATGTTGCCCTTTCCTTTTTTGGGGGGGTTTATTTAGATCTAAATCGCACACATATGATACTGTTTTACAATGAATGAAAGCATAATCTTGAATTACTTGTCATTTTAGTGCTATAGTTGCGATGTCATAAACAGTCTCCACACGTTGTAATTTTCTCTTTTGGATATACATTTGTCCCCCGCATTTCCTTATATGCTGTTTGTTTTTATTATTATATCAAGAAGCTACAGTCGTGATACCACCATTCTCACACATAGTAAACTTCTCTTTTGGATGTACATTTACCCCCCGTATTTCCTTTATGCGGGTTGTTTTTACATAAAGAAGCTACAGTTGTGATATCACCTTTTACACATCGTAACGTTCTCTTTTGGATGTACGTTTGCCCCCAGTATTTCCTTTATGCTGGTTGTTTTTACATCAAGAATATTCCTTTATTTCTCATAAGAAGAAAAGAAGTTGTGTTATCCCCAAATTCATGCTGTATTCATGATCTTCACTGTCCGTAGTTTTGTGTGACTGTAGAGATGGCTAAGCAACTTCTCCAAACTTGTTTTTTCCATTTCTTAATGCATTAGCACAGATTAGCTGTTATGTTAGCCATTGATTAAAGAAATTGTTTTGTGCTTCTTGTCATTAGAAGGTAAATCCAATTTTCTTCCGGTGACTGTATAATTCTGTCTTTACTCTCAACTGTTTTTGTTTGGATCTGAAGTTCAAGTAACCACTTCTGTCTGACATTCTAATCTTTAAGCCAATTTGCAACAATTAAATGCTTATAAAAATGGATTTGGTAGGACATTATAGCTAAACAAAAGAGAAAAAACATTGGATAAGGCAACTATTCCAGCCACATGCTTAGATGTCAGCCTCATGGCTGATCCTGTCCAGAATCATCCAGTTGTTTAGTAGGGACAAATATTTTTGTCACAGTACTGGTTCCAGCTAATGCTCTGGACAAGCGTTGCTAATTTCTCTAATCTAGTTTAGTGCATAATGTGTAATCTATTGAAGAAATATTTTATCATTTTCAAACGGCTCGATGATGTTTAAGTGTGTACTTGTGCATGTACATGTGTAGTGTTTGCCGATTGCTATGCTTATCTTGCCTCGCAATAACTTAAAGACACATTACAAGTTATTCAGTCTGTATAGTATAGAACTCTTAGATTTGTAAAATATTGAGATATCTTCAGTTATTTGTCGTTGTTTAGTAACTCTTCCTTCTCCCATCCCAGTTTTTGTGTATGACAGGAACCAGATGAATGTGCTTGAGCTAAACAAGACAGACTACGAGAGCTGCAATACTGATCATCCTCTCCACAATTGGACTACTGGAGCAGGAAGGGACGTTGTTCCGCTTAATGTGACTAAAACCTACTATTTCGCTAGTGGAAAAGGATACTGTTATGGAGGCATGAAAGTGGCTATTCATGTTGAAAAGGCACCTCCACCTCCAAAAGCTGCTCCAGTACGCAGCAGTTCAACAAATTTGCTCAACTCATTTAAAGCACAGATAATGATACCAGCTCTTTTCGCAACCGCTGCTGTGTGGGATGCATTTCTTCTGCTCTGGTAGGATGGTTAAGTGAACCATACATGCTGGATGCTTCAGATAATTAGTTAAACCAAGTGTCAAGAAAGTGTTTAGATTTATTTTTTGTGTGCTTGTATTTTCTTTTTTCTTGAAAGTTACCATCTTTTTTTTTTTTTACCACCAAGTGCCATTATCATTTGACCTGAAAATCAATTTTTTATTTCAGATCAA</genome_strand>
        <mrna_strand>GGAAGAAGGAAGAGCTTAGCTAAGAACTCTAGAGGTTGCGAGAAGATATTATTGTAGCAATGGAGGCGGTGAGAAGGAGGAGCTTTGGTTGGCCGACAATGGCGGTGGTGCTAACATGCGCTTTGCTCGTGATGCTGCCTCAAGTGTACTCGATTCGGTACATTGTGGGATCGAGATTCGGGTGGACTAACAGTGTCAATTACACCAATTGGGCTAAGGACAAACATTTCTACAACGGAGACTGGCTCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTGTGTATGACAGGAACCAGATGAATGTGCTTGAGCTAAACAAGACAGACTACGAGAGCTGCAATACTGATCATCCTCTCCACAATTGGACTACTGGAGCAGGAAGGGACGTTGTTCCGCTTAATGTGATTAAAACCTACTATTTCGCTAGTGGAAAAGGATACTGTTATGGAGGCATGAAAGTGGCTATTCATGTTGAAAAGGCACCTCCACCTCCAAAAGCTGCTCCAGTACGCAGCAGTTCAACAAATTTGCTCAACTCATTTAAAGCACAGATAATGATACCAGCTCTTTTCGCAACCGCTGCTGTGTGGGATGCATTTCTTCTGCTCTGGTAGGATGGTTAAGTGAACCATACATGCTGGATGCTTCAGATAATTAGTTAAACCAAGTGTCAAGAAAGTGTTTAGATTTATTTTTTGTGTGCTTGTATTTTCTTTTTTCTTGAAAGTTACCATCTTTTTTTTTTTTTACCACCAAGTGCCATTATCATTTGACCTGAAAATCAATTTTTTATTTCAGAACAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E552253" ref_strand="+" ref_description="SGN-E552253 [cTSB-3-F16]">
      <seq>ggaagagcttagctaagaactctagaggttgcgagaagatattattgtagcaatggaggcggtgagaaggaggagctttggttggccgacaatggcggtggtgctaacatgcgctttgctcgtgatgctgcctcaagtgtactcgattcggtacattgtgggatcgagattcgggtggactaacagtgtcaattacaccaattgggctaaggacaaacatttctacaacggagactggctcttttttgtgtatgacaggaaccagatgaatgtgcttgagctaaacaagacagactacgagagctgcaatactgatcatcctctccacaattggactactggagcaggaagggacgttgttccgcttaatgtgactaaaacctactatttcgctagtggaaaaggatactgttatggaggcatgaaagtggctattcatgttgaaaaggcacctccacctccaaaagctgctccagtacgcagcagttcaacaaatttgctcaactcatttaaagcacagataatgataccagctcttttcgcaaccgctgctgtgtgggatgcatttcttctgctctggtaggatggttaagtgaaccatacatgctggatgcttcagataattagttaaaccaagtgtcaagaaagtgtttagatttattttttgtgtgcttgtattttcttttttcttgaaagttaccatctttttttttttttaccaccaagtgccattatcatttgacctgaaaatcaattttttatttcaaatcaaattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="48389" stop="51562"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48689" g_stop="48930" g_length="242"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="242" r_length="242" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="48931" i_stop="50728" i_length="1798">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.854" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50729" g_stop="51262" g_length="534"/>
          <reference_exon_boundary r_type="cDNA" r_start="243" r_stop="776" r_length="534" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E552253" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>776</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E552253" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48689" e_stop="48930"/>
          <exon e_start="50729" e_stop="51262"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAGAGCTTAGCTAAGAACTCTAGAGGTTGCGAGAAGATATTATTGTAGCAATGGAGGCGGTGAGAAGGAGGAGCTTTGGTTGGCCGACAATGGCGGTGGTGCTAACATGCGCTTTGCTCGTGATGCTGCCTCAAGTGTACTCGATTCGGTACATTGTGGGATCGAGATTCGGGTGGACTAACAGTGTCAATTACACCAATTGGGCTAAGGACAAACATTTCTACAACGGAGACTGGCTCTGTAAGCTCTAGATCTACTCTTCTTTCAGCTCATTCTTAAGATTTTCTTCTGTTCTTAGCTTGTTTCTACTAATAAGAAATTTGTCTGGATCTTAGATATACCCGGGGTTTAGTATAAATATGAGTATAATTTTGTTTCTATAGTTGGAGCTTGGAGCCTTAGTTTTCTGTTTAAGCTCTGTGGTTTACGCTGGGTTTCATTTATTTGCTTGCTGCTTTCTATAATTGGAGCTCTGCCTTTTCCGGTGCTCATTAGTAGGAGTGAACTTTCGGAAACTTTGATTGACTAGATGGTGCTAGATGGTGAAGGTCTGGTGTAAATTGCCTTTTTTTTTTTCTGTGAAGGAGTGAATTAGTTTCTAAGTAGAATTCTTCTGTGTCGTTCAGATCTATGTTTTTAGCTTGCATTTAGAATGGCATTTACTCTGTTTATACCTAATTTGAATTATAGAGTTTCCAGCTGGGCATTTTCGGTGATGAAAGTTTGAAGTTTTTCCTTTTTATGACTGCTTTTAGCTGGCAGCTTCTTCATAAAGGCAATGGTGTTCCGTTTGAAATTAAATGTTGCCCTTTCCTTTTTTGGGGGGGTTTATTTAGATCTAAATCGCACACATATGATACTGTTTTACAATGAATGAAAGCATAATCTTGAATTACTTGTCATTTTAGTGCTATAGTTGCGATGTCATAAACAGTCTCCACACGTTGTAATTTTCTCTTTTGGATATACATTTGTCCCCCGCATTTCCTTATATGCTGTTTGTTTTTATTATTATATCAAGAAGCTACAGTCGTGATACCACCATTCTCACACATAGTAAACTTCTCTTTTGGATGTACATTTACCCCCCGTATTTCCTTTATGCGGGTTGTTTTTACATAAAGAAGCTACAGTTGTGATATCACCTTTTACACATCGTAACGTTCTCTTTTGGATGTACGTTTGCCCCCAGTATTTCCTTTATGCTGGTTGTTTTTACATCAAGAATATTCCTTTATTTCTCATAAGAAGAAAAGAAGTTGTGTTATCCCCAAATTCATGCTGTATTCATGATCTTCACTGTCCGTAGTTTTGTGTGACTGTAGAGATGGCTAAGCAACTTCTCCAAACTTGTTTTTTCCATTTCTTAATGCATTAGCACAGATTAGCTGTTATGTTAGCCATTGATTAAAGAAATTGTTTTGTGCTTCTTGTCATTAGAAGGTAAATCCAATTTTCTTCCGGTGACTGTATAATTCTGTCTTTACTCTCAACTGTTTTTGTTTGGATCTGAAGTTCAAGTAACCACTTCTGTCTGACATTCTAATCTTTAAGCCAATTTGCAACAATTAAATGCTTATAAAAATGGATTTGGTAGGACATTATAGCTAAACAAAAGAGAAAAAACATTGGATAAGGCAACTATTCCAGCCACATGCTTAGATGTCAGCCTCATGGCTGATCCTGTCCAGAATCATCCAGTTGTTTAGTAGGGACAAATATTTTTGTCACAGTACTGGTTCCAGCTAATGCTCTGGACAAGCGTTGCTAATTTCTCTAATCTAGTTTAGTGCATAATGTGTAATCTATTGAAGAAATATTTTATCATTTTCAAACGGCTCGATGATGTTTAAGTGTGTACTTGTGCATGTACATGTGTAGTGTTTGCCGATTGCTATGCTTATCTTGCCTCGCAATAACTTAAAGACACATTACAAGTTATTCAGTCTGTATAGTATAGAACTCTTAGATTTGTAAAATATTGAGATATCTTCAGTTATTTGTCGTTGTTTAGTAACTCTTCCTTCTCCCATCCCAGTTTTTGTGTATGACAGGAACCAGATGAATGTGCTTGAGCTAAACAAGACAGACTACGAGAGCTGCAATACTGATCATCCTCTCCACAATTGGACTACTGGAGCAGGAAGGGACGTTGTTCCGCTTAATGTGACTAAAACCTACTATTTCGCTAGTGGAAAAGGATACTGTTATGGAGGCATGAAAGTGGCTATTCATGTTGAAAAGGCACCTCCACCTCCAAAAGCTGCTCCAGTACGCAGCAGTTCAACAAATTTGCTCAACTCATTTAAAGCACAGATAATGATACCAGCTCTTTTCGCAACCGCTGCTGTGTGGGATGCATTTCTTCTGCTCTGGTAGGATGGTTAAGTGAACCATACATGCTGGATGCTTCAGATAATTAGTTAAACCAAGTGTCAAGAAAGTGTTTAGATTTATTTTTTGTGTGCTTGTATTTTCTTTTTTCTTGAAAGTTACCATCTTTTTTTTTTTTTACCACCAAGTGCCATTATCATTTGACCTGAAAATCAATTTTTTATTTCAGATCAAATTG</genome_strand>
        <mrna_strand>GGAAGAGCTTAGCTAAGAACTCTAGAGGTTGCGAGAAGATATTATTGTAGCAATGGAGGCGGTGAGAAGGAGGAGCTTTGGTTGGCCGACAATGGCGGTGGTGCTAACATGCGCTTTGCTCGTGATGCTGCCTCAAGTGTACTCGATTCGGTACATTGTGGGATCGAGATTCGGGTGGACTAACAGTGTCAATTACACCAATTGGGCTAAGGACAAACATTTCTACAACGGAGACTGGCTCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTGTGTATGACAGGAACCAGATGAATGTGCTTGAGCTAAACAAGACAGACTACGAGAGCTGCAATACTGATCATCCTCTCCACAATTGGACTACTGGAGCAGGAAGGGACGTTGTTCCGCTTAATGTGACTAAAACCTACTATTTCGCTAGTGGAAAAGGATACTGTTATGGAGGCATGAAAGTGGCTATTCATGTTGAAAAGGCACCTCCACCTCCAAAAGCTGCTCCAGTACGCAGCAGTTCAACAAATTTGCTCAACTCATTTAAAGCACAGATAATGATACCAGCTCTTTTCGCAACCGCTGCTGTGTGGGATGCATTTCTTCTGCTCTGGTAGGATGGTTAAGTGAACCATACATGCTGGATGCTTCAGATAATTAGTTAAACCAAGTGTCAAGAAAGTGTTTAGATTTATTTTTTGTGTGCTTGTATTTTCTTTTTTCTTGAAAGTTACCATCTTTTTTTTTTTTTACCACCAAGTGCCATTATCATTTGACCTGAAAATCAATTTTTTATTTCAAATCAAATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E552060" ref_strand="+" ref_description="SGN-E552060 [cTSB-2-L17]">
      <seq>ggaagagcttagctaagaactctagaggttgcgagaagatattattgtagcaatggaggcggtgagaaggaggagctttggttggccgacaatggcggtggtgctaacatgcgctttgctcgtgatgctgcctcaagtgtactcgattcggtacattgtgggatcgagattcgggtggactaacagtgtcaattacaccaattgggctaaggacaaacatttctacaacggagactggctcttttttgtgtatgacaggaaccagatgaatgtgcttgagctaaacaagacagactacgagagctgcaatactgatcatcctctccacaattggactactggagcaggaagggacgttgttccgcttaatgtgactaaaacctactatttcgctagtggaaaaggatactgttatggaggcatgaaagtggctattcatgttgaaaaggcacctccacctccaaaagctgctccagtacgcagcagttcaacaaatttgctcaactcatttaaagcacagataatgataccagctcttttcgcaaccgctgctgtgtgggatgcatttcttctgctctggtaggatggttaagtgaaccatacatgctggatgcttcagataattagttaaaccaagtgtcaagaaagtgtttagatttattttttgtgtgcttgtattttcttttttcttgaaagttaccatctttttttttttttaccccccagtgccattatcatttgacctggaaaatcaattttttatttcaaatcaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="48389" stop="51560"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48689" g_stop="48930" g_length="242"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="242" r_length="242" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="48931" i_stop="50728" i_length="1798">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.854" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50729" g_stop="51260" g_length="532"/>
          <reference_exon_boundary r_type="cDNA" r_start="243" r_stop="775" r_length="533" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E552060" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>774</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E552060" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48689" e_stop="48930"/>
          <exon e_start="50729" e_stop="51260"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAGAGCTTAGCTAAGAACTCTAGAGGTTGCGAGAAGATATTATTGTAGCAATGGAGGCGGTGAGAAGGAGGAGCTTTGGTTGGCCGACAATGGCGGTGGTGCTAACATGCGCTTTGCTCGTGATGCTGCCTCAAGTGTACTCGATTCGGTACATTGTGGGATCGAGATTCGGGTGGACTAACAGTGTCAATTACACCAATTGGGCTAAGGACAAACATTTCTACAACGGAGACTGGCTCTGTAAGCTCTAGATCTACTCTTCTTTCAGCTCATTCTTAAGATTTTCTTCTGTTCTTAGCTTGTTTCTACTAATAAGAAATTTGTCTGGATCTTAGATATACCCGGGGTTTAGTATAAATATGAGTATAATTTTGTTTCTATAGTTGGAGCTTGGAGCCTTAGTTTTCTGTTTAAGCTCTGTGGTTTACGCTGGGTTTCATTTATTTGCTTGCTGCTTTCTATAATTGGAGCTCTGCCTTTTCCGGTGCTCATTAGTAGGAGTGAACTTTCGGAAACTTTGATTGACTAGATGGTGCTAGATGGTGAAGGTCTGGTGTAAATTGCCTTTTTTTTTTTCTGTGAAGGAGTGAATTAGTTTCTAAGTAGAATTCTTCTGTGTCGTTCAGATCTATGTTTTTAGCTTGCATTTAGAATGGCATTTACTCTGTTTATACCTAATTTGAATTATAGAGTTTCCAGCTGGGCATTTTCGGTGATGAAAGTTTGAAGTTTTTCCTTTTTATGACTGCTTTTAGCTGGCAGCTTCTTCATAAAGGCAATGGTGTTCCGTTTGAAATTAAATGTTGCCCTTTCCTTTTTTGGGGGGGTTTATTTAGATCTAAATCGCACACATATGATACTGTTTTACAATGAATGAAAGCATAATCTTGAATTACTTGTCATTTTAGTGCTATAGTTGCGATGTCATAAACAGTCTCCACACGTTGTAATTTTCTCTTTTGGATATACATTTGTCCCCCGCATTTCCTTATATGCTGTTTGTTTTTATTATTATATCAAGAAGCTACAGTCGTGATACCACCATTCTCACACATAGTAAACTTCTCTTTTGGATGTACATTTACCCCCCGTATTTCCTTTATGCGGGTTGTTTTTACATAAAGAAGCTACAGTTGTGATATCACCTTTTACACATCGTAACGTTCTCTTTTGGATGTACGTTTGCCCCCAGTATTTCCTTTATGCTGGTTGTTTTTACATCAAGAATATTCCTTTATTTCTCATAAGAAGAAAAGAAGTTGTGTTATCCCCAAATTCATGCTGTATTCATGATCTTCACTGTCCGTAGTTTTGTGTGACTGTAGAGATGGCTAAGCAACTTCTCCAAACTTGTTTTTTCCATTTCTTAATGCATTAGCACAGATTAGCTGTTATGTTAGCCATTGATTAAAGAAATTGTTTTGTGCTTCTTGTCATTAGAAGGTAAATCCAATTTTCTTCCGGTGACTGTATAATTCTGTCTTTACTCTCAACTGTTTTTGTTTGGATCTGAAGTTCAAGTAACCACTTCTGTCTGACATTCTAATCTTTAAGCCAATTTGCAACAATTAAATGCTTATAAAAATGGATTTGGTAGGACATTATAGCTAAACAAAAGAGAAAAAACATTGGATAAGGCAACTATTCCAGCCACATGCTTAGATGTCAGCCTCATGGCTGATCCTGTCCAGAATCATCCAGTTGTTTAGTAGGGACAAATATTTTTGTCACAGTACTGGTTCCAGCTAATGCTCTGGACAAGCGTTGCTAATTTCTCTAATCTAGTTTAGTGCATAATGTGTAATCTATTGAAGAAATATTTTATCATTTTCAAACGGCTCGATGATGTTTAAGTGTGTACTTGTGCATGTACATGTGTAGTGTTTGCCGATTGCTATGCTTATCTTGCCTCGCAATAACTTAAAGACACATTACAAGTTATTCAGTCTGTATAGTATAGAACTCTTAGATTTGTAAAATATTGAGATATCTTCAGTTATTTGTCGTTGTTTAGTAACTCTTCCTTCTCCCATCCCAGTTTTTGTGTATGACAGGAACCAGATGAATGTGCTTGAGCTAAACAAGACAGACTACGAGAGCTGCAATACTGATCATCCTCTCCACAATTGGACTACTGGAGCAGGAAGGGACGTTGTTCCGCTTAATGTGACTAAAACCTACTATTTCGCTAGTGGAAAAGGATACTGTTATGGAGGCATGAAAGTGGCTATTCATGTTGAAAAGGCACCTCCACCTCCAAAAGCTGCTCCAGTACGCAGCAGTTCAACAAATTTGCTCAACTCATTTAAAGCACAGATAATGATACCAGCTCTTTTCGCAACCGCTGCTGTGTGGGATGCATTTCTTCTGCTCTGGTAGGATGGTTAAGTGAACCATACATGCTGGATGCTTCAGATAATTAGTTAAACCAAGTGTCAAGAAAGTGTTTAGATTTATTTTTTGTGTGCTTGTATTTTCTTTTTTCTTGAAAGTTACCATCTTTTTTTTTTTTTACCACCAAGTGCCATTATCATTTGACCT-GAAAATCAATTTTTTATTTCAGATCAAAT</genome_strand>
        <mrna_strand>GGAAGAGCTTAGCTAAGAACTCTAGAGGTTGCGAGAAGATATTATTGTAGCAATGGAGGCGGTGAGAAGGAGGAGCTTTGGTTGGCCGACAATGGCGGTGGTGCTAACATGCGCTTTGCTCGTGATGCTGCCTCAAGTGTACTCGATTCGGTACATTGTGGGATCGAGATTCGGGTGGACTAACAGTGTCAATTACACCAATTGGGCTAAGGACAAACATTTCTACAACGGAGACTGGCTCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTGTGTATGACAGGAACCAGATGAATGTGCTTGAGCTAAACAAGACAGACTACGAGAGCTGCAATACTGATCATCCTCTCCACAATTGGACTACTGGAGCAGGAAGGGACGTTGTTCCGCTTAATGTGACTAAAACCTACTATTTCGCTAGTGGAAAAGGATACTGTTATGGAGGCATGAAAGTGGCTATTCATGTTGAAAAGGCACCTCCACCTCCAAAAGCTGCTCCAGTACGCAGCAGTTCAACAAATTTGCTCAACTCATTTAAAGCACAGATAATGATACCAGCTCTTTTCGCAACCGCTGCTGTGTGGGATGCATTTCTTCTGCTCTGGTAGGATGGTTAAGTGAACCATACATGCTGGATGCTTCAGATAATTAGTTAAACCAAGTGTCAAGAAAGTGTTTAGATTTATTTTTTGTGTGCTTGTATTTTCTTTTTTCTTGAAAGTTACCATCTTTTTTTTTTTTTACCCCCCAGTGCCATTATCATTTGACCTGGAAAATCAATTTTTTATTTCAAATCAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E733576" ref_strand="+" ref_description="SGN-E733576 [LB10BE10]">
      <seq>ccgcttagctaagaactctagaggttgcgagaagatattattgtagcaatggaggcggtgagaaggaggagctttggttggccgacaatggcggtggtgctaacatgcgctttgctcgtgatgctgcctcaagtgtactcgattcggtacattgtgggatcgagattcgggtggactaacagtgtcaattacaccaattgggctaaggacaaacatttctacaacggagactggctcttttttgtgtatgacaggaaccagatgaatgtgcttgagctaaacaagacagactacgagagctgcaatactgatcatcctctccacaattggactactggagcaggaagggacgttgttccgcttaatgtgactaaaacctactatttcgctagtggaaaaggatactgttatggaggcatgaaagtggctattcatgttgaaaaggcacctccacctccaaaagctgctccagtacgcagcagttcaacaaatttgctcaactcatttaaagcacagataatgataccagctcttttcgcaaccgctgctgtgtgggatgcatttcttctgctctggtaggatggttaagtgaaccatacatgctggatgcttcagataattagttaaaccaagtgtcaagaaagtgtttagatttattttttgtgtgcttgtattttctttttttcttgaaagttaccatctttttttttttttaccaccaagtgccattatcatttgacctgaaaatcaattttttatttcagatcaaattggtgtgggggggttgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="48395" stop="51578"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48693" g_stop="48930" g_length="238"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="238" r_length="238" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="48931" i_stop="50728" i_length="1798">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.854" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50729" g_stop="51278" g_length="550"/>
          <reference_exon_boundary r_type="cDNA" r_start="239" r_stop="789" r_length="551" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E733576" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>788</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E733576" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48693" e_stop="48930"/>
          <exon e_start="50729" e_stop="51278"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGCTTAGCTAAGAACTCTAGAGGTTGCGAGAAGATATTATTGTAGCAATGGAGGCGGTGAGAAGGAGGAGCTTTGGTTGGCCGACAATGGCGGTGGTGCTAACATGCGCTTTGCTCGTGATGCTGCCTCAAGTGTACTCGATTCGGTACATTGTGGGATCGAGATTCGGGTGGACTAACAGTGTCAATTACACCAATTGGGCTAAGGACAAACATTTCTACAACGGAGACTGGCTCTGTAAGCTCTAGATCTACTCTTCTTTCAGCTCATTCTTAAGATTTTCTTCTGTTCTTAGCTTGTTTCTACTAATAAGAAATTTGTCTGGATCTTAGATATACCCGGGGTTTAGTATAAATATGAGTATAATTTTGTTTCTATAGTTGGAGCTTGGAGCCTTAGTTTTCTGTTTAAGCTCTGTGGTTTACGCTGGGTTTCATTTATTTGCTTGCTGCTTTCTATAATTGGAGCTCTGCCTTTTCCGGTGCTCATTAGTAGGAGTGAACTTTCGGAAACTTTGATTGACTAGATGGTGCTAGATGGTGAAGGTCTGGTGTAAATTGCCTTTTTTTTTTTCTGTGAAGGAGTGAATTAGTTTCTAAGTAGAATTCTTCTGTGTCGTTCAGATCTATGTTTTTAGCTTGCATTTAGAATGGCATTTACTCTGTTTATACCTAATTTGAATTATAGAGTTTCCAGCTGGGCATTTTCGGTGATGAAAGTTTGAAGTTTTTCCTTTTTATGACTGCTTTTAGCTGGCAGCTTCTTCATAAAGGCAATGGTGTTCCGTTTGAAATTAAATGTTGCCCTTTCCTTTTTTGGGGGGGTTTATTTAGATCTAAATCGCACACATATGATACTGTTTTACAATGAATGAAAGCATAATCTTGAATTACTTGTCATTTTAGTGCTATAGTTGCGATGTCATAAACAGTCTCCACACGTTGTAATTTTCTCTTTTGGATATACATTTGTCCCCCGCATTTCCTTATATGCTGTTTGTTTTTATTATTATATCAAGAAGCTACAGTCGTGATACCACCATTCTCACACATAGTAAACTTCTCTTTTGGATGTACATTTACCCCCCGTATTTCCTTTATGCGGGTTGTTTTTACATAAAGAAGCTACAGTTGTGATATCACCTTTTACACATCGTAACGTTCTCTTTTGGATGTACGTTTGCCCCCAGTATTTCCTTTATGCTGGTTGTTTTTACATCAAGAATATTCCTTTATTTCTCATAAGAAGAAAAGAAGTTGTGTTATCCCCAAATTCATGCTGTATTCATGATCTTCACTGTCCGTAGTTTTGTGTGACTGTAGAGATGGCTAAGCAACTTCTCCAAACTTGTTTTTTCCATTTCTTAATGCATTAGCACAGATTAGCTGTTATGTTAGCCATTGATTAAAGAAATTGTTTTGTGCTTCTTGTCATTAGAAGGTAAATCCAATTTTCTTCCGGTGACTGTATAATTCTGTCTTTACTCTCAACTGTTTTTGTTTGGATCTGAAGTTCAAGTAACCACTTCTGTCTGACATTCTAATCTTTAAGCCAATTTGCAACAATTAAATGCTTATAAAAATGGATTTGGTAGGACATTATAGCTAAACAAAAGAGAAAAAACATTGGATAAGGCAACTATTCCAGCCACATGCTTAGATGTCAGCCTCATGGCTGATCCTGTCCAGAATCATCCAGTTGTTTAGTAGGGACAAATATTTTTGTCACAGTACTGGTTCCAGCTAATGCTCTGGACAAGCGTTGCTAATTTCTCTAATCTAGTTTAGTGCATAATGTGTAATCTATTGAAGAAATATTTTATCATTTTCAAACGGCTCGATGATGTTTAAGTGTGTACTTGTGCATGTACATGTGTAGTGTTTGCCGATTGCTATGCTTATCTTGCCTCGCAATAACTTAAAGACACATTACAAGTTATTCAGTCTGTATAGTATAGAACTCTTAGATTTGTAAAATATTGAGATATCTTCAGTTATTTGTCGTTGTTTAGTAACTCTTCCTTCTCCCATCCCAGTTTTTGTGTATGACAGGAACCAGATGAATGTGCTTGAGCTAAACAAGACAGACTACGAGAGCTGCAATACTGATCATCCTCTCCACAATTGGACTACTGGAGCAGGAAGGGACGTTGTTCCGCTTAATGTGACTAAAACCTACTATTTCGCTAGTGGAAAAGGATACTGTTATGGAGGCATGAAAGTGGCTATTCATGTTGAAAAGGCACCTCCACCTCCAAAAGCTGCTCCAGTACGCAGCAGTTCAACAAATTTGCTCAACTCATTTAAAGCACAGATAATGATACCAGCTCTTTTCGCAACCGCTGCTGTGTGGGATGCATTTCTTCTGCTCTGGTAGGATGGTTAAGTGAACCATACATGCTGGATGCTTCAGATAATTAGTTAAACCAAGTGTCAAGAAAGTGTTTAGATTTATTTTTTGTGTGCTTGTATTTTC-TTTTTTCTTGAAAGTTACCATCTTTTTTTTTTTTTACCACCAAGTGCCATTATCATTTGACCTGAAAATCAATTTTTTATTTCAGATCAAATTGGTGTGTGGGGGTTGAT</genome_strand>
        <mrna_strand>CCGCTTAGCTAAGAACTCTAGAGGTTGCGAGAAGATATTATTGTAGCAATGGAGGCGGTGAGAAGGAGGAGCTTTGGTTGGCCGACAATGGCGGTGGTGCTAACATGCGCTTTGCTCGTGATGCTGCCTCAAGTGTACTCGATTCGGTACATTGTGGGATCGAGATTCGGGTGGACTAACAGTGTCAATTACACCAATTGGGCTAAGGACAAACATTTCTACAACGGAGACTGGCTCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTGTGTATGACAGGAACCAGATGAATGTGCTTGAGCTAAACAAGACAGACTACGAGAGCTGCAATACTGATCATCCTCTCCACAATTGGACTACTGGAGCAGGAAGGGACGTTGTTCCGCTTAATGTGACTAAAACCTACTATTTCGCTAGTGGAAAAGGATACTGTTATGGAGGCATGAAAGTGGCTATTCATGTTGAAAAGGCACCTCCACCTCCAAAAGCTGCTCCAGTACGCAGCAGTTCAACAAATTTGCTCAACTCATTTAAAGCACAGATAATGATACCAGCTCTTTTCGCAACCGCTGCTGTGTGGGATGCATTTCTTCTGCTCTGGTAGGATGGTTAAGTGAACCATACATGCTGGATGCTTCAGATAATTAGTTAAACCAAGTGTCAAGAAAGTGTTTAGATTTATTTTTTGTGTGCTTGTATTTTCTTTTTTTCTTGAAAGTTACCATCTTTTTTTTTTTTTACCACCAAGTGCCATTATCATTTGACCTGAAAATCAATTTTTTATTTCAGATCAAATTGGTGTGGGGGGGTTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E729374" ref_strand="+" ref_description="SGN-E729374 [LA20DE02]">
      <seq>cttagctaagaactctagaggttgcgagaagatttattgtagcaatggaggcggtgagaaggaggagctttggttggccgacaatggcggtggtgctaacatgcgctttgctcgtgatgctgcctcaagtgtactcgattcggtacattgtgggatcgagattcgggtggactaacagtgtcaattacaccaattgggctaaggacaaacatttctacaacggagactggctcttttttgtgtatgacaggaaccagatgaatgtgcttgagctaaacaagacagactacgagagctgcaatactgatcatcctctccacaattggactactggagcaggaagggacgttgttccgcttaatgtgactaaaacctactatttcgctagtggaaaaggatactgttatggaggcatgaaagtggctattcatgttgaaaaggcacctccacctccaaaagctgctccagtacgcagcagttcaacaaatttgctcaactcatttaaagcacagataatgataccagctcttttcgcaaccgctgctgtgtgggatgcatttcttctgctctggtaggatggttaagtgaaccatacatgctggatgcttcagataattagttaaaccaagtgtcaagaaagtgttta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="48396" stop="51440"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48696" g_stop="48930" g_length="235"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="234" r_length="234" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="48931" i_stop="50728" i_length="1798">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.854" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50729" g_stop="51140" g_length="412"/>
          <reference_exon_boundary r_type="cDNA" r_start="235" r_stop="646" r_length="412" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E729374" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>647</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E729374" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48696" e_stop="48930"/>
          <exon e_start="50729" e_stop="51140"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTAGCTAAGAACTCTAGAGGTTGCGAGAAGATATTATTGTAGCAATGGAGGCGGTGAGAAGGAGGAGCTTTGGTTGGCCGACAATGGCGGTGGTGCTAACATGCGCTTTGCTCGTGATGCTGCCTCAAGTGTACTCGATTCGGTACATTGTGGGATCGAGATTCGGGTGGACTAACAGTGTCAATTACACCAATTGGGCTAAGGACAAACATTTCTACAACGGAGACTGGCTCTGTAAGCTCTAGATCTACTCTTCTTTCAGCTCATTCTTAAGATTTTCTTCTGTTCTTAGCTTGTTTCTACTAATAAGAAATTTGTCTGGATCTTAGATATACCCGGGGTTTAGTATAAATATGAGTATAATTTTGTTTCTATAGTTGGAGCTTGGAGCCTTAGTTTTCTGTTTAAGCTCTGTGGTTTACGCTGGGTTTCATTTATTTGCTTGCTGCTTTCTATAATTGGAGCTCTGCCTTTTCCGGTGCTCATTAGTAGGAGTGAACTTTCGGAAACTTTGATTGACTAGATGGTGCTAGATGGTGAAGGTCTGGTGTAAATTGCCTTTTTTTTTTTCTGTGAAGGAGTGAATTAGTTTCTAAGTAGAATTCTTCTGTGTCGTTCAGATCTATGTTTTTAGCTTGCATTTAGAATGGCATTTACTCTGTTTATACCTAATTTGAATTATAGAGTTTCCAGCTGGGCATTTTCGGTGATGAAAGTTTGAAGTTTTTCCTTTTTATGACTGCTTTTAGCTGGCAGCTTCTTCATAAAGGCAATGGTGTTCCGTTTGAAATTAAATGTTGCCCTTTCCTTTTTTGGGGGGGTTTATTTAGATCTAAATCGCACACATATGATACTGTTTTACAATGAATGAAAGCATAATCTTGAATTACTTGTCATTTTAGTGCTATAGTTGCGATGTCATAAACAGTCTCCACACGTTGTAATTTTCTCTTTTGGATATACATTTGTCCCCCGCATTTCCTTATATGCTGTTTGTTTTTATTATTATATCAAGAAGCTACAGTCGTGATACCACCATTCTCACACATAGTAAACTTCTCTTTTGGATGTACATTTACCCCCCGTATTTCCTTTATGCGGGTTGTTTTTACATAAAGAAGCTACAGTTGTGATATCACCTTTTACACATCGTAACGTTCTCTTTTGGATGTACGTTTGCCCCCAGTATTTCCTTTATGCTGGTTGTTTTTACATCAAGAATATTCCTTTATTTCTCATAAGAAGAAAAGAAGTTGTGTTATCCCCAAATTCATGCTGTATTCATGATCTTCACTGTCCGTAGTTTTGTGTGACTGTAGAGATGGCTAAGCAACTTCTCCAAACTTGTTTTTTCCATTTCTTAATGCATTAGCACAGATTAGCTGTTATGTTAGCCATTGATTAAAGAAATTGTTTTGTGCTTCTTGTCATTAGAAGGTAAATCCAATTTTCTTCCGGTGACTGTATAATTCTGTCTTTACTCTCAACTGTTTTTGTTTGGATCTGAAGTTCAAGTAACCACTTCTGTCTGACATTCTAATCTTTAAGCCAATTTGCAACAATTAAATGCTTATAAAAATGGATTTGGTAGGACATTATAGCTAAACAAAAGAGAAAAAACATTGGATAAGGCAACTATTCCAGCCACATGCTTAGATGTCAGCCTCATGGCTGATCCTGTCCAGAATCATCCAGTTGTTTAGTAGGGACAAATATTTTTGTCACAGTACTGGTTCCAGCTAATGCTCTGGACAAGCGTTGCTAATTTCTCTAATCTAGTTTAGTGCATAATGTGTAATCTATTGAAGAAATATTTTATCATTTTCAAACGGCTCGATGATGTTTAAGTGTGTACTTGTGCATGTACATGTGTAGTGTTTGCCGATTGCTATGCTTATCTTGCCTCGCAATAACTTAAAGACACATTACAAGTTATTCAGTCTGTATAGTATAGAACTCTTAGATTTGTAAAATATTGAGATATCTTCAGTTATTTGTCGTTGTTTAGTAACTCTTCCTTCTCCCATCCCAGTTTTTGTGTATGACAGGAACCAGATGAATGTGCTTGAGCTAAACAAGACAGACTACGAGAGCTGCAATACTGATCATCCTCTCCACAATTGGACTACTGGAGCAGGAAGGGACGTTGTTCCGCTTAATGTGACTAAAACCTACTATTTCGCTAGTGGAAAAGGATACTGTTATGGAGGCATGAAAGTGGCTATTCATGTTGAAAAGGCACCTCCACCTCCAAAAGCTGCTCCAGTACGCAGCAGTTCAACAAATTTGCTCAACTCATTTAAAGCACAGATAATGATACCAGCTCTTTTCGCAACCGCTGCTGTGTGGGATGCATTTCTTCTGCTCTGGTAGGATGGTTAAGTGAACCATACATGCTGGATGCTTCAGATAATTAGTTAAACCAAGTGTCAAGAAAGTGTTTA</genome_strand>
        <mrna_strand>CTTAGCTAAGAACTCTAGAGGTTGCGAGAAGAT-TTATTGTAGCAATGGAGGCGGTGAGAAGGAGGAGCTTTGGTTGGCCGACAATGGCGGTGGTGCTAACATGCGCTTTGCTCGTGATGCTGCCTCAAGTGTACTCGATTCGGTACATTGTGGGATCGAGATTCGGGTGGACTAACAGTGTCAATTACACCAATTGGGCTAAGGACAAACATTTCTACAACGGAGACTGGCTCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTGTGTATGACAGGAACCAGATGAATGTGCTTGAGCTAAACAAGACAGACTACGAGAGCTGCAATACTGATCATCCTCTCCACAATTGGACTACTGGAGCAGGAAGGGACGTTGTTCCGCTTAATGTGACTAAAACCTACTATTTCGCTAGTGGAAAAGGATACTGTTATGGAGGCATGAAAGTGGCTATTCATGTTGAAAAGGCACCTCCACCTCCAAAAGCTGCTCCAGTACGCAGCAGTTCAACAAATTTGCTCAACTCATTTAAAGCACAGATAATGATACCAGCTCTTTTCGCAACCGCTGCTGTGTGGGATGCATTTCTTCTGCTCTGGTAGGATGGTTAAGTGAACCATACATGCTGGATGCTTCAGATAATTAGTTAAACCAAGTGTCAAGAAAGTGTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E301548" ref_strand="+" ref_description="SGN-E301548 [cLEW-23-O22]">
      <seq>cttagctaagaactctagaggttgcgagaagatattattgtagcaatggaggcggtgagaaggaggagctttggttggccgacaatggcggtggtgctaacatgcgctttgctcgtgatgctgcctcaagtgtactcgattcggtacattgtgggatcgagattcgggtggactaacagtgtcaattacaccaattgggctaaggacaaacatttctacaacggagactggctcttttttgtgtatgacaggaaccagatgaatgtgcttgagctaaacaagacagactacgagagctgcaatactgatcatcctctccacaattggactactggagcaggaagggacgttgttccgcttaatgtgactaaaacctactatttcgctagtggaaaaggatactgttatggaggcatgaaagtggctattcatgttgaaaaggcacctccacctccaaaagct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="48396" stop="51255"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48696" g_stop="48930" g_length="235"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="235" r_length="235" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="48931" i_stop="50728" i_length="1798">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.854" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50729" g_stop="50955" g_length="227"/>
          <reference_exon_boundary r_type="cDNA" r_start="236" r_stop="462" r_length="227" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E301548" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>462</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E301548" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48696" e_stop="48930"/>
          <exon e_start="50729" e_stop="50955"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTAGCTAAGAACTCTAGAGGTTGCGAGAAGATATTATTGTAGCAATGGAGGCGGTGAGAAGGAGGAGCTTTGGTTGGCCGACAATGGCGGTGGTGCTAACATGCGCTTTGCTCGTGATGCTGCCTCAAGTGTACTCGATTCGGTACATTGTGGGATCGAGATTCGGGTGGACTAACAGTGTCAATTACACCAATTGGGCTAAGGACAAACATTTCTACAACGGAGACTGGCTCTGTAAGCTCTAGATCTACTCTTCTTTCAGCTCATTCTTAAGATTTTCTTCTGTTCTTAGCTTGTTTCTACTAATAAGAAATTTGTCTGGATCTTAGATATACCCGGGGTTTAGTATAAATATGAGTATAATTTTGTTTCTATAGTTGGAGCTTGGAGCCTTAGTTTTCTGTTTAAGCTCTGTGGTTTACGCTGGGTTTCATTTATTTGCTTGCTGCTTTCTATAATTGGAGCTCTGCCTTTTCCGGTGCTCATTAGTAGGAGTGAACTTTCGGAAACTTTGATTGACTAGATGGTGCTAGATGGTGAAGGTCTGGTGTAAATTGCCTTTTTTTTTTTCTGTGAAGGAGTGAATTAGTTTCTAAGTAGAATTCTTCTGTGTCGTTCAGATCTATGTTTTTAGCTTGCATTTAGAATGGCATTTACTCTGTTTATACCTAATTTGAATTATAGAGTTTCCAGCTGGGCATTTTCGGTGATGAAAGTTTGAAGTTTTTCCTTTTTATGACTGCTTTTAGCTGGCAGCTTCTTCATAAAGGCAATGGTGTTCCGTTTGAAATTAAATGTTGCCCTTTCCTTTTTTGGGGGGGTTTATTTAGATCTAAATCGCACACATATGATACTGTTTTACAATGAATGAAAGCATAATCTTGAATTACTTGTCATTTTAGTGCTATAGTTGCGATGTCATAAACAGTCTCCACACGTTGTAATTTTCTCTTTTGGATATACATTTGTCCCCCGCATTTCCTTATATGCTGTTTGTTTTTATTATTATATCAAGAAGCTACAGTCGTGATACCACCATTCTCACACATAGTAAACTTCTCTTTTGGATGTACATTTACCCCCCGTATTTCCTTTATGCGGGTTGTTTTTACATAAAGAAGCTACAGTTGTGATATCACCTTTTACACATCGTAACGTTCTCTTTTGGATGTACGTTTGCCCCCAGTATTTCCTTTATGCTGGTTGTTTTTACATCAAGAATATTCCTTTATTTCTCATAAGAAGAAAAGAAGTTGTGTTATCCCCAAATTCATGCTGTATTCATGATCTTCACTGTCCGTAGTTTTGTGTGACTGTAGAGATGGCTAAGCAACTTCTCCAAACTTGTTTTTTCCATTTCTTAATGCATTAGCACAGATTAGCTGTTATGTTAGCCATTGATTAAAGAAATTGTTTTGTGCTTCTTGTCATTAGAAGGTAAATCCAATTTTCTTCCGGTGACTGTATAATTCTGTCTTTACTCTCAACTGTTTTTGTTTGGATCTGAAGTTCAAGTAACCACTTCTGTCTGACATTCTAATCTTTAAGCCAATTTGCAACAATTAAATGCTTATAAAAATGGATTTGGTAGGACATTATAGCTAAACAAAAGAGAAAAAACATTGGATAAGGCAACTATTCCAGCCACATGCTTAGATGTCAGCCTCATGGCTGATCCTGTCCAGAATCATCCAGTTGTTTAGTAGGGACAAATATTTTTGTCACAGTACTGGTTCCAGCTAATGCTCTGGACAAGCGTTGCTAATTTCTCTAATCTAGTTTAGTGCATAATGTGTAATCTATTGAAGAAATATTTTATCATTTTCAAACGGCTCGATGATGTTTAAGTGTGTACTTGTGCATGTACATGTGTAGTGTTTGCCGATTGCTATGCTTATCTTGCCTCGCAATAACTTAAAGACACATTACAAGTTATTCAGTCTGTATAGTATAGAACTCTTAGATTTGTAAAATATTGAGATATCTTCAGTTATTTGTCGTTGTTTAGTAACTCTTCCTTCTCCCATCCCAGTTTTTGTGTATGACAGGAACCAGATGAATGTGCTTGAGCTAAACAAGACAGACTACGAGAGCTGCAATACTGATCATCCTCTCCACAATTGGACTACTGGAGCAGGAAGGGACGTTGTTCCGCTTAATGTGACTAAAACCTACTATTTCGCTAGTGGAAAAGGATACTGTTATGGAGGCATGAAAGTGGCTATTCATGTTGAAAAGGCACCTCCACCTCCAAAAGCT</genome_strand>
        <mrna_strand>CTTAGCTAAGAACTCTAGAGGTTGCGAGAAGATATTATTGTAGCAATGGAGGCGGTGAGAAGGAGGAGCTTTGGTTGGCCGACAATGGCGGTGGTGCTAACATGCGCTTTGCTCGTGATGCTGCCTCAAGTGTACTCGATTCGGTACATTGTGGGATCGAGATTCGGGTGGACTAACAGTGTCAATTACACCAATTGGGCTAAGGACAAACATTTCTACAACGGAGACTGGCTCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTGTGTATGACAGGAACCAGATGAATGTGCTTGAGCTAAACAAGACAGACTACGAGAGCTGCAATACTGATCATCCTCTCCACAATTGGACTACTGGAGCAGGAAGGGACGTTGTTCCGCTTAATGTGACTAAAACCTACTATTTCGCTAGTGGAAAAGGATACTGTTATGGAGGCATGAAAGTGGCTATTCATGTTGAAAAGGCACCTCCACCTCCAAAAGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E345805" ref_strand="+" ref_description="SGN-E345805 [cTOF-18-J17]">
      <seq>ttagctaagaactctagaggttgcgagaagatattattgtagcaatggaggcggtgagaaggaggagctttggttggccgacaatggcggtggtgctaacatgcgctttgctcgtgatgctgcctcaagtgtactcgattcggtacattgtgggatcgagattcgggtggactaacagtgtcaattacaccaattgggctaaggacaaacatttctacaacggagactggctcttttttgtgtatgacaggaaccagatgaatgtgcttgagctaaacaagacagactacgagagctgcaatactgatcatcctctccacaattggactactggagcaggaagggacgttgttccgcttaatgtgactaaaacctactatttcgctagtggaaaaggatactgttatggaggcatgaaagtggctattcatgttgaaaaggcacctccacctccaaaagctgctccagtacgcagcagttcaacaaatttgctcaactcatttaaagcacagataatgataccagctcttttcgcaaccgctgctgtgtgggatgcatttcttctgctctggtaggatggttaagtgaaccatacatgctggatgcttcagataattagttaaaccaagtgtca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="48397" stop="51428"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48697" g_stop="48930" g_length="234"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="234" r_length="234" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="48931" i_stop="50728" i_length="1798">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.854" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50729" g_stop="51128" g_length="400"/>
          <reference_exon_boundary r_type="cDNA" r_start="235" r_stop="634" r_length="400" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E345805" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>634</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E345805" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48697" e_stop="48930"/>
          <exon e_start="50729" e_stop="51128"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAGCTAAGAACTCTAGAGGTTGCGAGAAGATATTATTGTAGCAATGGAGGCGGTGAGAAGGAGGAGCTTTGGTTGGCCGACAATGGCGGTGGTGCTAACATGCGCTTTGCTCGTGATGCTGCCTCAAGTGTACTCGATTCGGTACATTGTGGGATCGAGATTCGGGTGGACTAACAGTGTCAATTACACCAATTGGGCTAAGGACAAACATTTCTACAACGGAGACTGGCTCTGTAAGCTCTAGATCTACTCTTCTTTCAGCTCATTCTTAAGATTTTCTTCTGTTCTTAGCTTGTTTCTACTAATAAGAAATTTGTCTGGATCTTAGATATACCCGGGGTTTAGTATAAATATGAGTATAATTTTGTTTCTATAGTTGGAGCTTGGAGCCTTAGTTTTCTGTTTAAGCTCTGTGGTTTACGCTGGGTTTCATTTATTTGCTTGCTGCTTTCTATAATTGGAGCTCTGCCTTTTCCGGTGCTCATTAGTAGGAGTGAACTTTCGGAAACTTTGATTGACTAGATGGTGCTAGATGGTGAAGGTCTGGTGTAAATTGCCTTTTTTTTTTTCTGTGAAGGAGTGAATTAGTTTCTAAGTAGAATTCTTCTGTGTCGTTCAGATCTATGTTTTTAGCTTGCATTTAGAATGGCATTTACTCTGTTTATACCTAATTTGAATTATAGAGTTTCCAGCTGGGCATTTTCGGTGATGAAAGTTTGAAGTTTTTCCTTTTTATGACTGCTTTTAGCTGGCAGCTTCTTCATAAAGGCAATGGTGTTCCGTTTGAAATTAAATGTTGCCCTTTCCTTTTTTGGGGGGGTTTATTTAGATCTAAATCGCACACATATGATACTGTTTTACAATGAATGAAAGCATAATCTTGAATTACTTGTCATTTTAGTGCTATAGTTGCGATGTCATAAACAGTCTCCACACGTTGTAATTTTCTCTTTTGGATATACATTTGTCCCCCGCATTTCCTTATATGCTGTTTGTTTTTATTATTATATCAAGAAGCTACAGTCGTGATACCACCATTCTCACACATAGTAAACTTCTCTTTTGGATGTACATTTACCCCCCGTATTTCCTTTATGCGGGTTGTTTTTACATAAAGAAGCTACAGTTGTGATATCACCTTTTACACATCGTAACGTTCTCTTTTGGATGTACGTTTGCCCCCAGTATTTCCTTTATGCTGGTTGTTTTTACATCAAGAATATTCCTTTATTTCTCATAAGAAGAAAAGAAGTTGTGTTATCCCCAAATTCATGCTGTATTCATGATCTTCACTGTCCGTAGTTTTGTGTGACTGTAGAGATGGCTAAGCAACTTCTCCAAACTTGTTTTTTCCATTTCTTAATGCATTAGCACAGATTAGCTGTTATGTTAGCCATTGATTAAAGAAATTGTTTTGTGCTTCTTGTCATTAGAAGGTAAATCCAATTTTCTTCCGGTGACTGTATAATTCTGTCTTTACTCTCAACTGTTTTTGTTTGGATCTGAAGTTCAAGTAACCACTTCTGTCTGACATTCTAATCTTTAAGCCAATTTGCAACAATTAAATGCTTATAAAAATGGATTTGGTAGGACATTATAGCTAAACAAAAGAGAAAAAACATTGGATAAGGCAACTATTCCAGCCACATGCTTAGATGTCAGCCTCATGGCTGATCCTGTCCAGAATCATCCAGTTGTTTAGTAGGGACAAATATTTTTGTCACAGTACTGGTTCCAGCTAATGCTCTGGACAAGCGTTGCTAATTTCTCTAATCTAGTTTAGTGCATAATGTGTAATCTATTGAAGAAATATTTTATCATTTTCAAACGGCTCGATGATGTTTAAGTGTGTACTTGTGCATGTACATGTGTAGTGTTTGCCGATTGCTATGCTTATCTTGCCTCGCAATAACTTAAAGACACATTACAAGTTATTCAGTCTGTATAGTATAGAACTCTTAGATTTGTAAAATATTGAGATATCTTCAGTTATTTGTCGTTGTTTAGTAACTCTTCCTTCTCCCATCCCAGTTTTTGTGTATGACAGGAACCAGATGAATGTGCTTGAGCTAAACAAGACAGACTACGAGAGCTGCAATACTGATCATCCTCTCCACAATTGGACTACTGGAGCAGGAAGGGACGTTGTTCCGCTTAATGTGACTAAAACCTACTATTTCGCTAGTGGAAAAGGATACTGTTATGGAGGCATGAAAGTGGCTATTCATGTTGAAAAGGCACCTCCACCTCCAAAAGCTGCTCCAGTACGCAGCAGTTCAACAAATTTGCTCAACTCATTTAAAGCACAGATAATGATACCAGCTCTTTTCGCAACCGCTGCTGTGTGGGATGCATTTCTTCTGCTCTGGTAGGATGGTTAAGTGAACCATACATGCTGGATGCTTCAGATAATTAGTTAAACCAAGTGTCA</genome_strand>
        <mrna_strand>TTAGCTAAGAACTCTAGAGGTTGCGAGAAGATATTATTGTAGCAATGGAGGCGGTGAGAAGGAGGAGCTTTGGTTGGCCGACAATGGCGGTGGTGCTAACATGCGCTTTGCTCGTGATGCTGCCTCAAGTGTACTCGATTCGGTACATTGTGGGATCGAGATTCGGGTGGACTAACAGTGTCAATTACACCAATTGGGCTAAGGACAAACATTTCTACAACGGAGACTGGCTCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTGTGTATGACAGGAACCAGATGAATGTGCTTGAGCTAAACAAGACAGACTACGAGAGCTGCAATACTGATCATCCTCTCCACAATTGGACTACTGGAGCAGGAAGGGACGTTGTTCCGCTTAATGTGACTAAAACCTACTATTTCGCTAGTGGAAAAGGATACTGTTATGGAGGCATGAAAGTGGCTATTCATGTTGAAAAGGCACCTCCACCTCCAAAAGCTGCTCCAGTACGCAGCAGTTCAACAAATTTGCTCAACTCATTTAAAGCACAGATAATGATACCAGCTCTTTTCGCAACCGCTGCTGTGTGGGATGCATTTCTTCTGCTCTGGTAGGATGGTTAAGTGAACCATACATGCTGGATGCTTCAGATAATTAGTTAAACCAAGTGTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E310999" ref_strand="+" ref_description="SGN-E310999 [cLEZ-17-K3]">
      <seq>ttagctaagaactctataggttgcgagaagatattattgtagcaatggaggcggtgagaaggaggagctttggttggccgacaatggcggtggtgctaacatgcgctttgctcgtgatgctgcctcaagtgtactcgattcggtacattgtgggatcgagattcgggtggactaacagtgtcaattacaccaattgggctaaggacaaacatttctacaacggagactggctcttttttgtgtatgacaggaaccagatgaatgtgcttgagctaaacaagacagactacgagagctgcaatactgatcatcctctccacaattggactactggagcaggaagggacgttgttccgcttaatgtgactaaaacctactatttcgctagtggaaaaggatactgttatggaggcatgaaagtggctattcatgttgaaaaggcacctccacctccaaaagctgctccagtacgcagcagttcaacaaatttgctcaactcatttaaagcacagataatgataccagctcttttcgcaaccgctgctgtgtgggatgcatttcttctgctctggtaggatggttaagtgaaccatacatgctggatgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="48397" stop="51401"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48697" g_stop="48930" g_length="234"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="234" r_length="234" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="48931" i_stop="50728" i_length="1798">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.854" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50729" g_stop="51101" g_length="373"/>
          <reference_exon_boundary r_type="cDNA" r_start="235" r_stop="607" r_length="373" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E310999" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>607</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E310999" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48697" e_stop="48930"/>
          <exon e_start="50729" e_stop="51101"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAGCTAAGAACTCTAGAGGTTGCGAGAAGATATTATTGTAGCAATGGAGGCGGTGAGAAGGAGGAGCTTTGGTTGGCCGACAATGGCGGTGGTGCTAACATGCGCTTTGCTCGTGATGCTGCCTCAAGTGTACTCGATTCGGTACATTGTGGGATCGAGATTCGGGTGGACTAACAGTGTCAATTACACCAATTGGGCTAAGGACAAACATTTCTACAACGGAGACTGGCTCTGTAAGCTCTAGATCTACTCTTCTTTCAGCTCATTCTTAAGATTTTCTTCTGTTCTTAGCTTGTTTCTACTAATAAGAAATTTGTCTGGATCTTAGATATACCCGGGGTTTAGTATAAATATGAGTATAATTTTGTTTCTATAGTTGGAGCTTGGAGCCTTAGTTTTCTGTTTAAGCTCTGTGGTTTACGCTGGGTTTCATTTATTTGCTTGCTGCTTTCTATAATTGGAGCTCTGCCTTTTCCGGTGCTCATTAGTAGGAGTGAACTTTCGGAAACTTTGATTGACTAGATGGTGCTAGATGGTGAAGGTCTGGTGTAAATTGCCTTTTTTTTTTTCTGTGAAGGAGTGAATTAGTTTCTAAGTAGAATTCTTCTGTGTCGTTCAGATCTATGTTTTTAGCTTGCATTTAGAATGGCATTTACTCTGTTTATACCTAATTTGAATTATAGAGTTTCCAGCTGGGCATTTTCGGTGATGAAAGTTTGAAGTTTTTCCTTTTTATGACTGCTTTTAGCTGGCAGCTTCTTCATAAAGGCAATGGTGTTCCGTTTGAAATTAAATGTTGCCCTTTCCTTTTTTGGGGGGGTTTATTTAGATCTAAATCGCACACATATGATACTGTTTTACAATGAATGAAAGCATAATCTTGAATTACTTGTCATTTTAGTGCTATAGTTGCGATGTCATAAACAGTCTCCACACGTTGTAATTTTCTCTTTTGGATATACATTTGTCCCCCGCATTTCCTTATATGCTGTTTGTTTTTATTATTATATCAAGAAGCTACAGTCGTGATACCACCATTCTCACACATAGTAAACTTCTCTTTTGGATGTACATTTACCCCCCGTATTTCCTTTATGCGGGTTGTTTTTACATAAAGAAGCTACAGTTGTGATATCACCTTTTACACATCGTAACGTTCTCTTTTGGATGTACGTTTGCCCCCAGTATTTCCTTTATGCTGGTTGTTTTTACATCAAGAATATTCCTTTATTTCTCATAAGAAGAAAAGAAGTTGTGTTATCCCCAAATTCATGCTGTATTCATGATCTTCACTGTCCGTAGTTTTGTGTGACTGTAGAGATGGCTAAGCAACTTCTCCAAACTTGTTTTTTCCATTTCTTAATGCATTAGCACAGATTAGCTGTTATGTTAGCCATTGATTAAAGAAATTGTTTTGTGCTTCTTGTCATTAGAAGGTAAATCCAATTTTCTTCCGGTGACTGTATAATTCTGTCTTTACTCTCAACTGTTTTTGTTTGGATCTGAAGTTCAAGTAACCACTTCTGTCTGACATTCTAATCTTTAAGCCAATTTGCAACAATTAAATGCTTATAAAAATGGATTTGGTAGGACATTATAGCTAAACAAAAGAGAAAAAACATTGGATAAGGCAACTATTCCAGCCACATGCTTAGATGTCAGCCTCATGGCTGATCCTGTCCAGAATCATCCAGTTGTTTAGTAGGGACAAATATTTTTGTCACAGTACTGGTTCCAGCTAATGCTCTGGACAAGCGTTGCTAATTTCTCTAATCTAGTTTAGTGCATAATGTGTAATCTATTGAAGAAATATTTTATCATTTTCAAACGGCTCGATGATGTTTAAGTGTGTACTTGTGCATGTACATGTGTAGTGTTTGCCGATTGCTATGCTTATCTTGCCTCGCAATAACTTAAAGACACATTACAAGTTATTCAGTCTGTATAGTATAGAACTCTTAGATTTGTAAAATATTGAGATATCTTCAGTTATTTGTCGTTGTTTAGTAACTCTTCCTTCTCCCATCCCAGTTTTTGTGTATGACAGGAACCAGATGAATGTGCTTGAGCTAAACAAGACAGACTACGAGAGCTGCAATACTGATCATCCTCTCCACAATTGGACTACTGGAGCAGGAAGGGACGTTGTTCCGCTTAATGTGACTAAAACCTACTATTTCGCTAGTGGAAAAGGATACTGTTATGGAGGCATGAAAGTGGCTATTCATGTTGAAAAGGCACCTCCACCTCCAAAAGCTGCTCCAGTACGCAGCAGTTCAACAAATTTGCTCAACTCATTTAAAGCACAGATAATGATACCAGCTCTTTTCGCAACCGCTGCTGTGTGGGATGCATTTCTTCTGCTCTGGTAGGATGGTTAAGTGAACCATACATGCTGGATGCT</genome_strand>
        <mrna_strand>TTAGCTAAGAACTCTATAGGTTGCGAGAAGATATTATTGTAGCAATGGAGGCGGTGAGAAGGAGGAGCTTTGGTTGGCCGACAATGGCGGTGGTGCTAACATGCGCTTTGCTCGTGATGCTGCCTCAAGTGTACTCGATTCGGTACATTGTGGGATCGAGATTCGGGTGGACTAACAGTGTCAATTACACCAATTGGGCTAAGGACAAACATTTCTACAACGGAGACTGGCTCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTGTGTATGACAGGAACCAGATGAATGTGCTTGAGCTAAACAAGACAGACTACGAGAGCTGCAATACTGATCATCCTCTCCACAATTGGACTACTGGAGCAGGAAGGGACGTTGTTCCGCTTAATGTGACTAAAACCTACTATTTCGCTAGTGGAAAAGGATACTGTTATGGAGGCATGAAAGTGGCTATTCATGTTGAAAAGGCACCTCCACCTCCAAAAGCTGCTCCAGTACGCAGCAGTTCAACAAATTTGCTCAACTCATTTAAAGCACAGATAATGATACCAGCTCTTTTCGCAACCGCTGCTGTGTGGGATGCATTTCTTCTGCTCTGGTAGGATGGTTAAGTGAACCATACATGCTGGATGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E733991" ref_strand="+" ref_description="SGN-E733991 [LB11CA03]">
      <seq>agaactctagaggttgcgagaagatattattgtagcaatggaggcggtgagaaggaggagctttggttggccgacaatggcggtggtgctaacatgcgctttgctcgtgatgctgcctcaagtgtactcgattcggtacattgtgggatcgagattcgggtggactaacagtgtcaattacaccaattgggctaaggacaaacatttctacaacggagactggctcttttttgtgtatgacaggaaccagatgaatgtgcttgagctaaacaagacagactacgagagctgcaatactgatcatcctctccacaattggactactggagcaggaagggacgttgttccgcttaatgtgactaaaacctactatttcgctagtggaaaaggatactgttatggaggcatgaaagtggctattcatgttgaaaaggcacctccacctccaaaagctgctccagtacgcagcagttcaacaaatttgctcaactcatttaaagcacagataatgataccagctcttttcgcaaccgctgctgtgtgggatgcatttcttctgctctggtaggatggttaagtgaaccatacatgctggatgcttcagataattagttaaaccaagtgtcaagaaagtgtttagatttattttttgtgtgcttgtattttcttttttcttgaaagttaccatctttttttttttttaccaccaagtgccattatcatttgacctgaaaatcaattttttatttcaaatcaaattggtgtgtgggggttgatctgaaaaatttgtttatttatgttgtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="48404" stop="51605"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48704" g_stop="48930" g_length="227"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="227" r_length="227" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="48931" i_stop="50728" i_length="1798">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.854" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50729" g_stop="51305" g_length="577"/>
          <reference_exon_boundary r_type="cDNA" r_start="228" r_stop="804" r_length="577" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E733991" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>804</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E733991" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48704" e_stop="48930"/>
          <exon e_start="50729" e_stop="51305"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAACTCTAGAGGTTGCGAGAAGATATTATTGTAGCAATGGAGGCGGTGAGAAGGAGGAGCTTTGGTTGGCCGACAATGGCGGTGGTGCTAACATGCGCTTTGCTCGTGATGCTGCCTCAAGTGTACTCGATTCGGTACATTGTGGGATCGAGATTCGGGTGGACTAACAGTGTCAATTACACCAATTGGGCTAAGGACAAACATTTCTACAACGGAGACTGGCTCTGTAAGCTCTAGATCTACTCTTCTTTCAGCTCATTCTTAAGATTTTCTTCTGTTCTTAGCTTGTTTCTACTAATAAGAAATTTGTCTGGATCTTAGATATACCCGGGGTTTAGTATAAATATGAGTATAATTTTGTTTCTATAGTTGGAGCTTGGAGCCTTAGTTTTCTGTTTAAGCTCTGTGGTTTACGCTGGGTTTCATTTATTTGCTTGCTGCTTTCTATAATTGGAGCTCTGCCTTTTCCGGTGCTCATTAGTAGGAGTGAACTTTCGGAAACTTTGATTGACTAGATGGTGCTAGATGGTGAAGGTCTGGTGTAAATTGCCTTTTTTTTTTTCTGTGAAGGAGTGAATTAGTTTCTAAGTAGAATTCTTCTGTGTCGTTCAGATCTATGTTTTTAGCTTGCATTTAGAATGGCATTTACTCTGTTTATACCTAATTTGAATTATAGAGTTTCCAGCTGGGCATTTTCGGTGATGAAAGTTTGAAGTTTTTCCTTTTTATGACTGCTTTTAGCTGGCAGCTTCTTCATAAAGGCAATGGTGTTCCGTTTGAAATTAAATGTTGCCCTTTCCTTTTTTGGGGGGGTTTATTTAGATCTAAATCGCACACATATGATACTGTTTTACAATGAATGAAAGCATAATCTTGAATTACTTGTCATTTTAGTGCTATAGTTGCGATGTCATAAACAGTCTCCACACGTTGTAATTTTCTCTTTTGGATATACATTTGTCCCCCGCATTTCCTTATATGCTGTTTGTTTTTATTATTATATCAAGAAGCTACAGTCGTGATACCACCATTCTCACACATAGTAAACTTCTCTTTTGGATGTACATTTACCCCCCGTATTTCCTTTATGCGGGTTGTTTTTACATAAAGAAGCTACAGTTGTGATATCACCTTTTACACATCGTAACGTTCTCTTTTGGATGTACGTTTGCCCCCAGTATTTCCTTTATGCTGGTTGTTTTTACATCAAGAATATTCCTTTATTTCTCATAAGAAGAAAAGAAGTTGTGTTATCCCCAAATTCATGCTGTATTCATGATCTTCACTGTCCGTAGTTTTGTGTGACTGTAGAGATGGCTAAGCAACTTCTCCAAACTTGTTTTTTCCATTTCTTAATGCATTAGCACAGATTAGCTGTTATGTTAGCCATTGATTAAAGAAATTGTTTTGTGCTTCTTGTCATTAGAAGGTAAATCCAATTTTCTTCCGGTGACTGTATAATTCTGTCTTTACTCTCAACTGTTTTTGTTTGGATCTGAAGTTCAAGTAACCACTTCTGTCTGACATTCTAATCTTTAAGCCAATTTGCAACAATTAAATGCTTATAAAAATGGATTTGGTAGGACATTATAGCTAAACAAAAGAGAAAAAACATTGGATAAGGCAACTATTCCAGCCACATGCTTAGATGTCAGCCTCATGGCTGATCCTGTCCAGAATCATCCAGTTGTTTAGTAGGGACAAATATTTTTGTCACAGTACTGGTTCCAGCTAATGCTCTGGACAAGCGTTGCTAATTTCTCTAATCTAGTTTAGTGCATAATGTGTAATCTATTGAAGAAATATTTTATCATTTTCAAACGGCTCGATGATGTTTAAGTGTGTACTTGTGCATGTACATGTGTAGTGTTTGCCGATTGCTATGCTTATCTTGCCTCGCAATAACTTAAAGACACATTACAAGTTATTCAGTCTGTATAGTATAGAACTCTTAGATTTGTAAAATATTGAGATATCTTCAGTTATTTGTCGTTGTTTAGTAACTCTTCCTTCTCCCATCCCAGTTTTTGTGTATGACAGGAACCAGATGAATGTGCTTGAGCTAAACAAGACAGACTACGAGAGCTGCAATACTGATCATCCTCTCCACAATTGGACTACTGGAGCAGGAAGGGACGTTGTTCCGCTTAATGTGACTAAAACCTACTATTTCGCTAGTGGAAAAGGATACTGTTATGGAGGCATGAAAGTGGCTATTCATGTTGAAAAGGCACCTCCACCTCCAAAAGCTGCTCCAGTACGCAGCAGTTCAACAAATTTGCTCAACTCATTTAAAGCACAGATAATGATACCAGCTCTTTTCGCAACCGCTGCTGTGTGGGATGCATTTCTTCTGCTCTGGTAGGATGGTTAAGTGAACCATACATGCTGGATGCTTCAGATAATTAGTTAAACCAAGTGTCAAGAAAGTGTTTAGATTTATTTTTTGTGTGCTTGTATTTTCTTTTTTCTTGAAAGTTACCATCTTTTTTTTTTTTTACCACCAAGTGCCATTATCATTTGACCTGAAAATCAATTTTTTATTTCAGATCAAATTGGTGTGTGGGGGTTGATCTGAAAAATTTGTTTATTTATGTTGTT</genome_strand>
        <mrna_strand>AGAACTCTAGAGGTTGCGAGAAGATATTATTGTAGCAATGGAGGCGGTGAGAAGGAGGAGCTTTGGTTGGCCGACAATGGCGGTGGTGCTAACATGCGCTTTGCTCGTGATGCTGCCTCAAGTGTACTCGATTCGGTACATTGTGGGATCGAGATTCGGGTGGACTAACAGTGTCAATTACACCAATTGGGCTAAGGACAAACATTTCTACAACGGAGACTGGCTCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTGTGTATGACAGGAACCAGATGAATGTGCTTGAGCTAAACAAGACAGACTACGAGAGCTGCAATACTGATCATCCTCTCCACAATTGGACTACTGGAGCAGGAAGGGACGTTGTTCCGCTTAATGTGACTAAAACCTACTATTTCGCTAGTGGAAAAGGATACTGTTATGGAGGCATGAAAGTGGCTATTCATGTTGAAAAGGCACCTCCACCTCCAAAAGCTGCTCCAGTACGCAGCAGTTCAACAAATTTGCTCAACTCATTTAAAGCACAGATAATGATACCAGCTCTTTTCGCAACCGCTGCTGTGTGGGATGCATTTCTTCTGCTCTGGTAGGATGGTTAAGTGAACCATACATGCTGGATGCTTCAGATAATTAGTTAAACCAAGTGTCAAGAAAGTGTTTAGATTTATTTTTTGTGTGCTTGTATTTTCTTTTTTCTTGAAAGTTACCATCTTTTTTTTTTTTTACCACCAAGTGCCATTATCATTTGACCTGAAAATCAATTTTTTATTTCAAATCAAATTGGTGTGTGGGGGTTGATCTGAAAAATTTGTTTATTTATGTTGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E285313" ref_strand="+" ref_description="SGN-E285313 [cLER-20-A18]">
      <seq>aactctagaggttgcgagaagatattattgtagcaatggaggcggtgagaaggaggagctttggttggccgacaatggcggtggtgctaacatgcgctttgctcgtgatgctgcctcaagtgtactcgattcggtacattgtgggatcgagattcgggtggactaacagtgtcaattacaccaattgggctaaggacaaacatttctacaacggagactggctcttttttgtgtatgacaggaaccagatgaatgtgcttgagctaaacaagacagactacgagagctgcaatactgatcatcctctccacaattggactactggagcaggaagggacgttgttccgcttaatgtgactaaaacctactatttcgctagtggaaaaggatactggtatggaggcatgaaagtggctattcatgttgaaaaggcacctccacctccaaaagctgctccagtacgcagcagttcaacaaatttgctcaactcatttaaagcacagataatgataccagctcttttcgcaaccgctgctgtgtgggatgcatttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="48406" stop="51355"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48706" g_stop="48930" g_length="225"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="225" r_length="225" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="48931" i_stop="50728" i_length="1798">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.854" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50729" g_stop="51055" g_length="327"/>
          <reference_exon_boundary r_type="cDNA" r_start="226" r_stop="552" r_length="327" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E285313" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>552</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E285313" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48706" e_stop="48930"/>
          <exon e_start="50729" e_stop="51055"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACTCTAGAGGTTGCGAGAAGATATTATTGTAGCAATGGAGGCGGTGAGAAGGAGGAGCTTTGGTTGGCCGACAATGGCGGTGGTGCTAACATGCGCTTTGCTCGTGATGCTGCCTCAAGTGTACTCGATTCGGTACATTGTGGGATCGAGATTCGGGTGGACTAACAGTGTCAATTACACCAATTGGGCTAAGGACAAACATTTCTACAACGGAGACTGGCTCTGTAAGCTCTAGATCTACTCTTCTTTCAGCTCATTCTTAAGATTTTCTTCTGTTCTTAGCTTGTTTCTACTAATAAGAAATTTGTCTGGATCTTAGATATACCCGGGGTTTAGTATAAATATGAGTATAATTTTGTTTCTATAGTTGGAGCTTGGAGCCTTAGTTTTCTGTTTAAGCTCTGTGGTTTACGCTGGGTTTCATTTATTTGCTTGCTGCTTTCTATAATTGGAGCTCTGCCTTTTCCGGTGCTCATTAGTAGGAGTGAACTTTCGGAAACTTTGATTGACTAGATGGTGCTAGATGGTGAAGGTCTGGTGTAAATTGCCTTTTTTTTTTTCTGTGAAGGAGTGAATTAGTTTCTAAGTAGAATTCTTCTGTGTCGTTCAGATCTATGTTTTTAGCTTGCATTTAGAATGGCATTTACTCTGTTTATACCTAATTTGAATTATAGAGTTTCCAGCTGGGCATTTTCGGTGATGAAAGTTTGAAGTTTTTCCTTTTTATGACTGCTTTTAGCTGGCAGCTTCTTCATAAAGGCAATGGTGTTCCGTTTGAAATTAAATGTTGCCCTTTCCTTTTTTGGGGGGGTTTATTTAGATCTAAATCGCACACATATGATACTGTTTTACAATGAATGAAAGCATAATCTTGAATTACTTGTCATTTTAGTGCTATAGTTGCGATGTCATAAACAGTCTCCACACGTTGTAATTTTCTCTTTTGGATATACATTTGTCCCCCGCATTTCCTTATATGCTGTTTGTTTTTATTATTATATCAAGAAGCTACAGTCGTGATACCACCATTCTCACACATAGTAAACTTCTCTTTTGGATGTACATTTACCCCCCGTATTTCCTTTATGCGGGTTGTTTTTACATAAAGAAGCTACAGTTGTGATATCACCTTTTACACATCGTAACGTTCTCTTTTGGATGTACGTTTGCCCCCAGTATTTCCTTTATGCTGGTTGTTTTTACATCAAGAATATTCCTTTATTTCTCATAAGAAGAAAAGAAGTTGTGTTATCCCCAAATTCATGCTGTATTCATGATCTTCACTGTCCGTAGTTTTGTGTGACTGTAGAGATGGCTAAGCAACTTCTCCAAACTTGTTTTTTCCATTTCTTAATGCATTAGCACAGATTAGCTGTTATGTTAGCCATTGATTAAAGAAATTGTTTTGTGCTTCTTGTCATTAGAAGGTAAATCCAATTTTCTTCCGGTGACTGTATAATTCTGTCTTTACTCTCAACTGTTTTTGTTTGGATCTGAAGTTCAAGTAACCACTTCTGTCTGACATTCTAATCTTTAAGCCAATTTGCAACAATTAAATGCTTATAAAAATGGATTTGGTAGGACATTATAGCTAAACAAAAGAGAAAAAACATTGGATAAGGCAACTATTCCAGCCACATGCTTAGATGTCAGCCTCATGGCTGATCCTGTCCAGAATCATCCAGTTGTTTAGTAGGGACAAATATTTTTGTCACAGTACTGGTTCCAGCTAATGCTCTGGACAAGCGTTGCTAATTTCTCTAATCTAGTTTAGTGCATAATGTGTAATCTATTGAAGAAATATTTTATCATTTTCAAACGGCTCGATGATGTTTAAGTGTGTACTTGTGCATGTACATGTGTAGTGTTTGCCGATTGCTATGCTTATCTTGCCTCGCAATAACTTAAAGACACATTACAAGTTATTCAGTCTGTATAGTATAGAACTCTTAGATTTGTAAAATATTGAGATATCTTCAGTTATTTGTCGTTGTTTAGTAACTCTTCCTTCTCCCATCCCAGTTTTTGTGTATGACAGGAACCAGATGAATGTGCTTGAGCTAAACAAGACAGACTACGAGAGCTGCAATACTGATCATCCTCTCCACAATTGGACTACTGGAGCAGGAAGGGACGTTGTTCCGCTTAATGTGACTAAAACCTACTATTTCGCTAGTGGAAAAGGATACTGTTATGGAGGCATGAAAGTGGCTATTCATGTTGAAAAGGCACCTCCACCTCCAAAAGCTGCTCCAGTACGCAGCAGTTCAACAAATTTGCTCAACTCATTTAAAGCACAGATAATGATACCAGCTCTTTTCGCAACCGCTGCTGTGTGGGATGCATTTC</genome_strand>
        <mrna_strand>AACTCTAGAGGTTGCGAGAAGATATTATTGTAGCAATGGAGGCGGTGAGAAGGAGGAGCTTTGGTTGGCCGACAATGGCGGTGGTGCTAACATGCGCTTTGCTCGTGATGCTGCCTCAAGTGTACTCGATTCGGTACATTGTGGGATCGAGATTCGGGTGGACTAACAGTGTCAATTACACCAATTGGGCTAAGGACAAACATTTCTACAACGGAGACTGGCTCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTGTGTATGACAGGAACCAGATGAATGTGCTTGAGCTAAACAAGACAGACTACGAGAGCTGCAATACTGATCATCCTCTCCACAATTGGACTACTGGAGCAGGAAGGGACGTTGTTCCGCTTAATGTGACTAAAACCTACTATTTCGCTAGTGGAAAAGGATACTGGTATGGAGGCATGAAAGTGGCTATTCATGTTGAAAAGGCACCTCCACCTCCAAAAGCTGCTCCAGTACGCAGCAGTTCAACAAATTTGCTCAACTCATTTAAAGCACAGATAATGATACCAGCTCTTTTCGCAACCGCTGCTGTGTGGGATGCATTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E338660" ref_strand="+" ref_description="SGN-E338660 [cTOE-15-B16]">
      <seq>ggaaaagcatgaaagatgatattattgtagcaatggaggcggtgagaaggaggagctttggttggccgacaatggcggtggtgctaacatgcgctttgctcgtgatgctgcctcaagtgtactcgattccgtacattatgggatcgagatgcgggtggactaacaaagttaattacaccaattgggctaaggacaaacatttctacaacggagactggctcttttttgtgtatgacaggaaccagatgaatgtgcttgagctaaacaagacagactacgagagctgcaatactgatcatcctctccacaattggactactggagcaggaagggacgttgttccgcttaatgtgactaaaacctactatttcgctagtggaaaaggatactgttatggaggcatgaaagtggctattcatgttgaaaaggcacctccacctccaaaagctgctccagtacgcagcagttcaacaaatttgctcaactcatttaaagcacagataatgataccagctcttttcgcaaccgctgctgtgtgggatgcatttcttctgctctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="48412" stop="51365"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48709" g_stop="48930" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="222" r_length="222" r_score="0.932"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="48931" i_stop="50728" i_length="1798">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.854" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50729" g_stop="51065" g_length="337"/>
          <reference_exon_boundary r_type="cDNA" r_start="223" r_stop="559" r_length="337" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E338660" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>559</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E338660" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48709" e_stop="48930"/>
          <exon e_start="50729" e_stop="51065"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTAGAGGTTGCGAGAAGATATTATTGTAGCAATGGAGGCGGTGAGAAGGAGGAGCTTTGGTTGGCCGACAATGGCGGTGGTGCTAACATGCGCTTTGCTCGTGATGCTGCCTCAAGTGTACTCGATTCGGTACATTGTGGGATCGAGATTCGGGTGGACTAACAGTGTCAATTACACCAATTGGGCTAAGGACAAACATTTCTACAACGGAGACTGGCTCTGTAAGCTCTAGATCTACTCTTCTTTCAGCTCATTCTTAAGATTTTCTTCTGTTCTTAGCTTGTTTCTACTAATAAGAAATTTGTCTGGATCTTAGATATACCCGGGGTTTAGTATAAATATGAGTATAATTTTGTTTCTATAGTTGGAGCTTGGAGCCTTAGTTTTCTGTTTAAGCTCTGTGGTTTACGCTGGGTTTCATTTATTTGCTTGCTGCTTTCTATAATTGGAGCTCTGCCTTTTCCGGTGCTCATTAGTAGGAGTGAACTTTCGGAAACTTTGATTGACTAGATGGTGCTAGATGGTGAAGGTCTGGTGTAAATTGCCTTTTTTTTTTTCTGTGAAGGAGTGAATTAGTTTCTAAGTAGAATTCTTCTGTGTCGTTCAGATCTATGTTTTTAGCTTGCATTTAGAATGGCATTTACTCTGTTTATACCTAATTTGAATTATAGAGTTTCCAGCTGGGCATTTTCGGTGATGAAAGTTTGAAGTTTTTCCTTTTTATGACTGCTTTTAGCTGGCAGCTTCTTCATAAAGGCAATGGTGTTCCGTTTGAAATTAAATGTTGCCCTTTCCTTTTTTGGGGGGGTTTATTTAGATCTAAATCGCACACATATGATACTGTTTTACAATGAATGAAAGCATAATCTTGAATTACTTGTCATTTTAGTGCTATAGTTGCGATGTCATAAACAGTCTCCACACGTTGTAATTTTCTCTTTTGGATATACATTTGTCCCCCGCATTTCCTTATATGCTGTTTGTTTTTATTATTATATCAAGAAGCTACAGTCGTGATACCACCATTCTCACACATAGTAAACTTCTCTTTTGGATGTACATTTACCCCCCGTATTTCCTTTATGCGGGTTGTTTTTACATAAAGAAGCTACAGTTGTGATATCACCTTTTACACATCGTAACGTTCTCTTTTGGATGTACGTTTGCCCCCAGTATTTCCTTTATGCTGGTTGTTTTTACATCAAGAATATTCCTTTATTTCTCATAAGAAGAAAAGAAGTTGTGTTATCCCCAAATTCATGCTGTATTCATGATCTTCACTGTCCGTAGTTTTGTGTGACTGTAGAGATGGCTAAGCAACTTCTCCAAACTTGTTTTTTCCATTTCTTAATGCATTAGCACAGATTAGCTGTTATGTTAGCCATTGATTAAAGAAATTGTTTTGTGCTTCTTGTCATTAGAAGGTAAATCCAATTTTCTTCCGGTGACTGTATAATTCTGTCTTTACTCTCAACTGTTTTTGTTTGGATCTGAAGTTCAAGTAACCACTTCTGTCTGACATTCTAATCTTTAAGCCAATTTGCAACAATTAAATGCTTATAAAAATGGATTTGGTAGGACATTATAGCTAAACAAAAGAGAAAAAACATTGGATAAGGCAACTATTCCAGCCACATGCTTAGATGTCAGCCTCATGGCTGATCCTGTCCAGAATCATCCAGTTGTTTAGTAGGGACAAATATTTTTGTCACAGTACTGGTTCCAGCTAATGCTCTGGACAAGCGTTGCTAATTTCTCTAATCTAGTTTAGTGCATAATGTGTAATCTATTGAAGAAATATTTTATCATTTTCAAACGGCTCGATGATGTTTAAGTGTGTACTTGTGCATGTACATGTGTAGTGTTTGCCGATTGCTATGCTTATCTTGCCTCGCAATAACTTAAAGACACATTACAAGTTATTCAGTCTGTATAGTATAGAACTCTTAGATTTGTAAAATATTGAGATATCTTCAGTTATTTGTCGTTGTTTAGTAACTCTTCCTTCTCCCATCCCAGTTTTTGTGTATGACAGGAACCAGATGAATGTGCTTGAGCTAAACAAGACAGACTACGAGAGCTGCAATACTGATCATCCTCTCCACAATTGGACTACTGGAGCAGGAAGGGACGTTGTTCCGCTTAATGTGACTAAAACCTACTATTTCGCTAGTGGAAAAGGATACTGTTATGGAGGCATGAAAGTGGCTATTCATGTTGAAAAGGCACCTCCACCTCCAAAAGCTGCTCCAGTACGCAGCAGTTCAACAAATTTGCTCAACTCATTTAAAGCACAGATAATGATACCAGCTCTTTTCGCAACCGCTGCTGTGTGGGATGCATTTCTTCTGCTCTG</genome_strand>
        <mrna_strand>GGAAAAGCATGAAAGATGATATTATTGTAGCAATGGAGGCGGTGAGAAGGAGGAGCTTTGGTTGGCCGACAATGGCGGTGGTGCTAACATGCGCTTTGCTCGTGATGCTGCCTCAAGTGTACTCGATTCCGTACATTATGGGATCGAGATGCGGGTGGACTAACAAAGTTAATTACACCAATTGGGCTAAGGACAAACATTTCTACAACGGAGACTGGCTCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTGTGTATGACAGGAACCAGATGAATGTGCTTGAGCTAAACAAGACAGACTACGAGAGCTGCAATACTGATCATCCTCTCCACAATTGGACTACTGGAGCAGGAAGGGACGTTGTTCCGCTTAATGTGACTAAAACCTACTATTTCGCTAGTGGAAAAGGATACTGTTATGGAGGCATGAAAGTGGCTATTCATGTTGAAAAGGCACCTCCACCTCCAAAAGCTGCTCCAGTACGCAGCAGTTCAACAAATTTGCTCAACTCATTTAAAGCACAGATAATGATACCAGCTCTTTTCGCAACCGCTGCTGTGTGGGATGCATTTCTTCTGCTCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E309399" ref_strand="+" ref_description="SGN-E309399 [cLEY-22-H5]">
      <seq>ctaacatgcgctttgctcgtgatgctgcctcaagtgtactcgattcggtacattgtgggatcgagattcgggtggactaacagtgtcaattacaccaattgggctaaggacaaacatttctacaacggagactggctcttttttgtgtatgacaggaaccagatgaatgtgcttgagctaaacaagacagactacgagagctgcaatactgatcatcctctccacaattggactactggagcaggaagggacgttgttccgcttaatgtgactaaaacctactatttcgctagtggaaaaggatactgttatggaggcatgaaagtggctattcatgttgaaaaggcacctccacctccaaaagctgctccagtacgcagcagttcaacaaatttgctcaactcatttaaagcacagataatgataccagctcttttcgcaaccgctgctgggtgggatgcaattcttctgctctggtaggatggttaagtgaaccatacatgctggatgcttcagataattagttaaaccaagtgtcaagaaagtgtttagatttatttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="48492" stop="51450"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48792" g_stop="48930" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="139" r_length="139" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="48931" i_stop="50728" i_length="1798">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.854" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50729" g_stop="51150" g_length="422"/>
          <reference_exon_boundary r_type="cDNA" r_start="140" r_stop="561" r_length="422" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E309399" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>561</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E309399" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48792" e_stop="48930"/>
          <exon e_start="50729" e_stop="51150"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAACATGCGCTTTGCTCGTGATGCTGCCTCAAGTGTACTCGATTCGGTACATTGTGGGATCGAGATTCGGGTGGACTAACAGTGTCAATTACACCAATTGGGCTAAGGACAAACATTTCTACAACGGAGACTGGCTCTGTAAGCTCTAGATCTACTCTTCTTTCAGCTCATTCTTAAGATTTTCTTCTGTTCTTAGCTTGTTTCTACTAATAAGAAATTTGTCTGGATCTTAGATATACCCGGGGTTTAGTATAAATATGAGTATAATTTTGTTTCTATAGTTGGAGCTTGGAGCCTTAGTTTTCTGTTTAAGCTCTGTGGTTTACGCTGGGTTTCATTTATTTGCTTGCTGCTTTCTATAATTGGAGCTCTGCCTTTTCCGGTGCTCATTAGTAGGAGTGAACTTTCGGAAACTTTGATTGACTAGATGGTGCTAGATGGTGAAGGTCTGGTGTAAATTGCCTTTTTTTTTTTCTGTGAAGGAGTGAATTAGTTTCTAAGTAGAATTCTTCTGTGTCGTTCAGATCTATGTTTTTAGCTTGCATTTAGAATGGCATTTACTCTGTTTATACCTAATTTGAATTATAGAGTTTCCAGCTGGGCATTTTCGGTGATGAAAGTTTGAAGTTTTTCCTTTTTATGACTGCTTTTAGCTGGCAGCTTCTTCATAAAGGCAATGGTGTTCCGTTTGAAATTAAATGTTGCCCTTTCCTTTTTTGGGGGGGTTTATTTAGATCTAAATCGCACACATATGATACTGTTTTACAATGAATGAAAGCATAATCTTGAATTACTTGTCATTTTAGTGCTATAGTTGCGATGTCATAAACAGTCTCCACACGTTGTAATTTTCTCTTTTGGATATACATTTGTCCCCCGCATTTCCTTATATGCTGTTTGTTTTTATTATTATATCAAGAAGCTACAGTCGTGATACCACCATTCTCACACATAGTAAACTTCTCTTTTGGATGTACATTTACCCCCCGTATTTCCTTTATGCGGGTTGTTTTTACATAAAGAAGCTACAGTTGTGATATCACCTTTTACACATCGTAACGTTCTCTTTTGGATGTACGTTTGCCCCCAGTATTTCCTTTATGCTGGTTGTTTTTACATCAAGAATATTCCTTTATTTCTCATAAGAAGAAAAGAAGTTGTGTTATCCCCAAATTCATGCTGTATTCATGATCTTCACTGTCCGTAGTTTTGTGTGACTGTAGAGATGGCTAAGCAACTTCTCCAAACTTGTTTTTTCCATTTCTTAATGCATTAGCACAGATTAGCTGTTATGTTAGCCATTGATTAAAGAAATTGTTTTGTGCTTCTTGTCATTAGAAGGTAAATCCAATTTTCTTCCGGTGACTGTATAATTCTGTCTTTACTCTCAACTGTTTTTGTTTGGATCTGAAGTTCAAGTAACCACTTCTGTCTGACATTCTAATCTTTAAGCCAATTTGCAACAATTAAATGCTTATAAAAATGGATTTGGTAGGACATTATAGCTAAACAAAAGAGAAAAAACATTGGATAAGGCAACTATTCCAGCCACATGCTTAGATGTCAGCCTCATGGCTGATCCTGTCCAGAATCATCCAGTTGTTTAGTAGGGACAAATATTTTTGTCACAGTACTGGTTCCAGCTAATGCTCTGGACAAGCGTTGCTAATTTCTCTAATCTAGTTTAGTGCATAATGTGTAATCTATTGAAGAAATATTTTATCATTTTCAAACGGCTCGATGATGTTTAAGTGTGTACTTGTGCATGTACATGTGTAGTGTTTGCCGATTGCTATGCTTATCTTGCCTCGCAATAACTTAAAGACACATTACAAGTTATTCAGTCTGTATAGTATAGAACTCTTAGATTTGTAAAATATTGAGATATCTTCAGTTATTTGTCGTTGTTTAGTAACTCTTCCTTCTCCCATCCCAGTTTTTGTGTATGACAGGAACCAGATGAATGTGCTTGAGCTAAACAAGACAGACTACGAGAGCTGCAATACTGATCATCCTCTCCACAATTGGACTACTGGAGCAGGAAGGGACGTTGTTCCGCTTAATGTGACTAAAACCTACTATTTCGCTAGTGGAAAAGGATACTGTTATGGAGGCATGAAAGTGGCTATTCATGTTGAAAAGGCACCTCCACCTCCAAAAGCTGCTCCAGTACGCAGCAGTTCAACAAATTTGCTCAACTCATTTAAAGCACAGATAATGATACCAGCTCTTTTCGCAACCGCTGCTGTGTGGGATGCATTTCTTCTGCTCTGGTAGGATGGTTAAGTGAACCATACATGCTGGATGCTTCAGATAATTAGTTAAACCAAGTGTCAAGAAAGTGTTTAGATTTATTTT</genome_strand>
        <mrna_strand>CTAACATGCGCTTTGCTCGTGATGCTGCCTCAAGTGTACTCGATTCGGTACATTGTGGGATCGAGATTCGGGTGGACTAACAGTGTCAATTACACCAATTGGGCTAAGGACAAACATTTCTACAACGGAGACTGGCTCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTGTGTATGACAGGAACCAGATGAATGTGCTTGAGCTAAACAAGACAGACTACGAGAGCTGCAATACTGATCATCCTCTCCACAATTGGACTACTGGAGCAGGAAGGGACGTTGTTCCGCTTAATGTGACTAAAACCTACTATTTCGCTAGTGGAAAAGGATACTGTTATGGAGGCATGAAAGTGGCTATTCATGTTGAAAAGGCACCTCCACCTCCAAAAGCTGCTCCAGTACGCAGCAGTTCAACAAATTTGCTCAACTCATTTAAAGCACAGATAATGATACCAGCTCTTTTCGCAACCGCTGCTGGGTGGGATGCAATTCTTCTGCTCTGGTAGGATGGTTAAGTGAACCATACATGCTGGATGCTTCAGATAATTAGTTAAACCAAGTGTCAAGAAAGTGTTTAGATTTATTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E398067" ref_strand="+" ref_description="SGN-E398067 [TUS-39-E24](-)">
      <seq>agatttgtaaaatattgagatatcttcagttatttgtcgttgtttagtaactcttccttctcccatcccagtttttgtgtatgacaggaaccagatgaatgtgcttgagctaaacaagacagactacgagagctgcaatactgatcatcctctccacaattggactactggagcaggaagggacgttgttccgcttaatgtgactaaaacctactatttcgctagtggaaaaggatactgttatggaggcatgaaagtggctattcatgttgaaaaggcacctccacctccaaaagctgctccagtacgcagcagttcaacaaatttgctcaactcatttaaagcacagataatgataccagctcttttcgcaaccgctgctgtgtgggatgcatttcttctgctctggtaggatggttaagtgaaccatacatgctggatgcttcagataattagttaaaccaagtgtcaagaaagtgtttagatttattttttgtgtgcttgtattttcttttttcttgaaagttaccatctttttttttttttaccaccaagtgccattatcatttgacctgaaaatcaattttttatttcagatcaaattggtgtgtgggggttgatctgaaaaatttgtttatttatgttgttacctaaacaagtttacaataattcattggagaaattgattgcggaaaaaaaggggggggccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="50358" stop="51661"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50658" g_stop="51348" g_length="691"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="690" r_length="690" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E398067" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>691</cumulative_length_of_scored_exons>
        <coverage percentage="0.973" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E398067" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50658" e_stop="51348"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGATTTGTAAAATATTGAGATATCTTCAGTTATTTGTCGTTGTTTAGTAACTCTTCCTTCTCCCATCCCAGTTTTTGTGTATGACAGGAACCAGATGAATGTGCTTGAGCTAAACAAGACAGACTACGAGAGCTGCAATACTGATCATCCTCTCCACAATTGGACTACTGGAGCAGGAAGGGACGTTGTTCCGCTTAATGTGACTAAAACCTACTATTTCGCTAGTGGAAAAGGATACTGTTATGGAGGCATGAAAGTGGCTATTCATGTTGAAAAGGCACCTCCACCTCCAAAAGCTGCTCCAGTACGCAGCAGTTCAACAAATTTGCTCAACTCATTTAAAGCACAGATAATGATACCAGCTCTTTTCGCAACCGCTGCTGTGTGGGATGCATTTCTTCTGCTCTGGTAGGATGGTTAAGTGAACCATACATGCTGGATGCTTCAGATAATTAGTTAAACCAAGTGTCAAGAAAGTGTTTAGATTTATTTTTTGTGTGCTTGTATTTTCTTTTTTCTTGAAAGTTACCATCTTTTTTTTTTTTTACCACCAAGTGCCATTATCATTTGACCTGAAAATCAATTTTTTATTTCAGATCAAATTGGTGTGTGGGGGTTGATCTGAAAAATTTGTTTATTTATGTTGTTACCTAAACAAGTTTACAATTGTTTCATTGGAGAAATTGATTGC</genome_strand>
        <mrna_strand>AGATTTGTAAAATATTGAGATATCTTCAGTTATTTGTCGTTGTTTAGTAACTCTTCCTTCTCCCATCCCAGTTTTTGTGTATGACAGGAACCAGATGAATGTGCTTGAGCTAAACAAGACAGACTACGAGAGCTGCAATACTGATCATCCTCTCCACAATTGGACTACTGGAGCAGGAAGGGACGTTGTTCCGCTTAATGTGACTAAAACCTACTATTTCGCTAGTGGAAAAGGATACTGTTATGGAGGCATGAAAGTGGCTATTCATGTTGAAAAGGCACCTCCACCTCCAAAAGCTGCTCCAGTACGCAGCAGTTCAACAAATTTGCTCAACTCATTTAAAGCACAGATAATGATACCAGCTCTTTTCGCAACCGCTGCTGTGTGGGATGCATTTCTTCTGCTCTGGTAGGATGGTTAAGTGAACCATACATGCTGGATGCTTCAGATAATTAGTTAAACCAAGTGTCAAGAAAGTGTTTAGATTTATTTTTTGTGTGCTTGTATTTTCTTTTTTCTTGAAAGTTACCATCTTTTTTTTTTTTTACCACCAAGTGCCATTATCATTTGACCTGAAAATCAATTTTTTATTTCAGATCAAATTGGTGTGTGGGGGTTGATCTGAAAAATTTGTTTATTTATGTTGTTACCTAAACAAGTTTACAA-TAATTCATTGGAGAAATTGATTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E393855" ref_strand="+" ref_description="SGN-E393855 [TUS-41-H23](-)">
      <seq>gtttagtaactcttccttctcccatcccagtttttgtgtatgacaggaaccagatgaatgtgcttgagctaaacaagacagactacgagagctgcaatactgatcatcctctccacaattggactactggagcaggaagggacgttgttccgcttaatgtgactaaaacctactatttcgctagtggaaaaggatactgttatggaggcatgaaagtggctattcatgttgaaaaggcacctccacctccaaaagctgctccagtacgcagcagttcaacaaatttgctcaactcatttaaagcacagataatgataccagctcttttcgcaaccgctgctgtgtgggatgcatttcttctgctctggtaggatggttaagtgaaccatacatgctggatgcttcagataattagttaaaccaagtgtcaagaaagtgtttagatttattttttgtgtgcttgtattttcttttttcttgaaagttaccatctttttttttttttaccaccaagtgccattatcatttgacctgaaaatcaattttttatttcagatcaaattggtgtgtgggggttgatctgaaaaatttgtttatttatgttgttacctaaacaagtttacaattgtttcattggagaaattgattgcggaaaaaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="50399" stop="51653"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50699" g_stop="51358" g_length="660"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="660" r_length="660" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E393855" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>660</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E393855" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50699" e_stop="51358"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTAGTAACTCTTCCTTCTCCCATCCCAGTTTTTGTGTATGACAGGAACCAGATGAATGTGCTTGAGCTAAACAAGACAGACTACGAGAGCTGCAATACTGATCATCCTCTCCACAATTGGACTACTGGAGCAGGAAGGGACGTTGTTCCGCTTAATGTGACTAAAACCTACTATTTCGCTAGTGGAAAAGGATACTGTTATGGAGGCATGAAAGTGGCTATTCATGTTGAAAAGGCACCTCCACCTCCAAAAGCTGCTCCAGTACGCAGCAGTTCAACAAATTTGCTCAACTCATTTAAAGCACAGATAATGATACCAGCTCTTTTCGCAACCGCTGCTGTGTGGGATGCATTTCTTCTGCTCTGGTAGGATGGTTAAGTGAACCATACATGCTGGATGCTTCAGATAATTAGTTAAACCAAGTGTCAAGAAAGTGTTTAGATTTATTTTTTGTGTGCTTGTATTTTCTTTTTTCTTGAAAGTTACCATCTTTTTTTTTTTTTACCACCAAGTGCCATTATCATTTGACCTGAAAATCAATTTTTTATTTCAGATCAAATTGGTGTGTGGGGGTTGATCTGAAAAATTTGTTTATTTATGTTGTTACCTAAACAAGTTTACAATTGTTTCATTGGAGAAATTGATTGCGTGGATCACG</genome_strand>
        <mrna_strand>GTTTAGTAACTCTTCCTTCTCCCATCCCAGTTTTTGTGTATGACAGGAACCAGATGAATGTGCTTGAGCTAAACAAGACAGACTACGAGAGCTGCAATACTGATCATCCTCTCCACAATTGGACTACTGGAGCAGGAAGGGACGTTGTTCCGCTTAATGTGACTAAAACCTACTATTTCGCTAGTGGAAAAGGATACTGTTATGGAGGCATGAAAGTGGCTATTCATGTTGAAAAGGCACCTCCACCTCCAAAAGCTGCTCCAGTACGCAGCAGTTCAACAAATTTGCTCAACTCATTTAAAGCACAGATAATGATACCAGCTCTTTTCGCAACCGCTGCTGTGTGGGATGCATTTCTTCTGCTCTGGTAGGATGGTTAAGTGAACCATACATGCTGGATGCTTCAGATAATTAGTTAAACCAAGTGTCAAGAAAGTGTTTAGATTTATTTTTTGTGTGCTTGTATTTTCTTTTTTCTTGAAAGTTACCATCTTTTTTTTTTTTTACCACCAAGTGCCATTATCATTTGACCTGAAAATCAATTTTTTATTTCAGATCAAATTGGTGTGTGGGGGTTGATCTGAAAAATTTGTTTATTTATGTTGTTACCTAAACAAGTTTACAATTGTTTCATTGGAGAAATTGATTGCGGAAAAAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E712600" ref_strand="+" ref_description="SGN-E712600 [FB05BC01]">
      <seq>gagagctgcaatactgatcatcctctccacaattggactactggagcaggaagggacgttgttccgcttaatgtgactaaaacctactatttcgctagtggaaaaggatactgttatggaggcatgaaagtggctattcatgttgaaaaggcacctccacctccaaaagctgctccagtacgcagcagttcaacaaatttgctcaactcatttaaagcacagataatgataccagctcttttcgcaaccgctgctgtgtgggatgcatttcttctgctctggtaggatggttaagtgaaccatacatgctggatgcttcagataattagttaaaccaagtgtcaagaaagtgtttagatttattttttgtgtgcttgtattttcttttttcttgaaagttaccatctttttttttttttaccaccaagggccattatcatttgacctgaaaatcaattttttatttcaaatcaaattggggtgggggggttgatctgaaaaatttgtttatttatgttgttacctaaacaagtttacaattgtttctttggaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="50485" stop="51640"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50785" g_stop="51339" g_length="555"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="555" r_length="555" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E712600" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>555</cumulative_length_of_scored_exons>
        <coverage percentage="0.984" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E712600" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50785" e_stop="51339"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGAGCTGCAATACTGATCATCCTCTCCACAATTGGACTACTGGAGCAGGAAGGGACGTTGTTCCGCTTAATGTGACTAAAACCTACTATTTCGCTAGTGGAAAAGGATACTGTTATGGAGGCATGAAAGTGGCTATTCATGTTGAAAAGGCACCTCCACCTCCAAAAGCTGCTCCAGTACGCAGCAGTTCAACAAATTTGCTCAACTCATTTAAAGCACAGATAATGATACCAGCTCTTTTCGCAACCGCTGCTGTGTGGGATGCATTTCTTCTGCTCTGGTAGGATGGTTAAGTGAACCATACATGCTGGATGCTTCAGATAATTAGTTAAACCAAGTGTCAAGAAAGTGTTTAGATTTATTTTTTGTGTGCTTGTATTTTCTTTTTTCTTGAAAGTTACCATCTTTTTTTTTTTTTACCACCAAGTGCCATTATCATTTGACCTGAAAATCAATTTTTTATTTCAGATCAAATTGGTGTGTGGGGGTTGATCTGAAAAATTTGTTTATTTATGTTGTTACCTAAACAAGTTTACAATTGTTTCATTGGAGAA</genome_strand>
        <mrna_strand>GAGAGCTGCAATACTGATCATCCTCTCCACAATTGGACTACTGGAGCAGGAAGGGACGTTGTTCCGCTTAATGTGACTAAAACCTACTATTTCGCTAGTGGAAAAGGATACTGTTATGGAGGCATGAAAGTGGCTATTCATGTTGAAAAGGCACCTCCACCTCCAAAAGCTGCTCCAGTACGCAGCAGTTCAACAAATTTGCTCAACTCATTTAAAGCACAGATAATGATACCAGCTCTTTTCGCAACCGCTGCTGTGTGGGATGCATTTCTTCTGCTCTGGTAGGATGGTTAAGTGAACCATACATGCTGGATGCTTCAGATAATTAGTTAAACCAAGTGTCAAGAAAGTGTTTAGATTTATTTTTTGTGTGCTTGTATTTTCTTTTTTCTTGAAAGTTACCATCTTTTTTTTTTTTTACCACCAAGGGCCATTATCATTTGACCTGAAAATCAATTTTTTATTTCAAATCAAATTGGGGTGGGGGGGTTGATCTGAAAAATTTGTTTATTTATGTTGTTACCTAAACAAGTTTACAATTGTTTCTTTGGAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E398119" ref_strand="+" ref_description="SGN-E398119 [TUS-41-F23](-)">
      <seq>ctccacaattggactactggagcaggaagggacgtttgttccgcttaatgtgactaaaacctactatttcggtagtggaaaaggatactgttatggaggcatgaaagtggctattcatgttgaaaaggcacctccaccttcaaaagctgctccagtacgcagcagttcaacaaatttgctcaactcatttaaagcacagataatgataccagctcttttcgcaaccgctgctgtgtgggatgcatttcttctgctttggtaggatggttaagtgaaccatacatgctggatgcttcagataattagttaaaccaagtgtcaagaaagtgtttagatttattttttgtgtgcttgtattttcttttttcttgaaagttaccatctttttttttttttaccaccaagtgccattatcatttgacctgaaaatcaattttttatttcagatcaaattggtgtgtgggggttgatctgaaaaatttgtttatttatgttgttacctaaacaagtttacaattgtttcattggagaaattgattgcggaaaaaaagggggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="50509" stop="51661"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50809" g_stop="51348" g_length="540"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="541" r_length="541" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E398119" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>540</cumulative_length_of_scored_exons>
        <coverage percentage="0.971" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E398119" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50809" e_stop="51348"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCCACAATTGGACTACTGGAGCAGGAAGGGACG-TTGTTCCGCTTAATGTGACTAAAACCTACTATTTCGCTAGTGGAAAAGGATACTGTTATGGAGGCATGAAAGTGGCTATTCATGTTGAAAAGGCACCTCCACCTCCAAAAGCTGCTCCAGTACGCAGCAGTTCAACAAATTTGCTCAACTCATTTAAAGCACAGATAATGATACCAGCTCTTTTCGCAACCGCTGCTGTGTGGGATGCATTTCTTCTGCTCTGGTAGGATGGTTAAGTGAACCATACATGCTGGATGCTTCAGATAATTAGTTAAACCAAGTGTCAAGAAAGTGTTTAGATTTATTTTTTGTGTGCTTGTATTTTCTTTTTTCTTGAAAGTTACCATCTTTTTTTTTTTTTACCACCAAGTGCCATTATCATTTGACCTGAAAATCAATTTTTTATTTCAGATCAAATTGGTGTGTGGGGGTTGATCTGAAAAATTTGTTTATTTATGTTGTTACCTAAACAAGTTTACAATTGTTTCATTGGAGAAATTGATTGC</genome_strand>
        <mrna_strand>CTCCACAATTGGACTACTGGAGCAGGAAGGGACGTTTGTTCCGCTTAATGTGACTAAAACCTACTATTTCGGTAGTGGAAAAGGATACTGTTATGGAGGCATGAAAGTGGCTATTCATGTTGAAAAGGCACCTCCACCTTCAAAAGCTGCTCCAGTACGCAGCAGTTCAACAAATTTGCTCAACTCATTTAAAGCACAGATAATGATACCAGCTCTTTTCGCAACCGCTGCTGTGTGGGATGCATTTCTTCTGCTTTGGTAGGATGGTTAAGTGAACCATACATGCTGGATGCTTCAGATAATTAGTTAAACCAAGTGTCAAGAAAGTGTTTAGATTTATTTTTTGTGTGCTTGTATTTTCTTTTTTCTTGAAAGTTACCATCTTTTTTTTTTTTTACCACCAAGTGCCATTATCATTTGACCTGAAAATCAATTTTTTATTTCAGATCAAATTGGTGTGTGGGGGTTGATCTGAAAAATTTGTTTATTTATGTTGTTACCTAAACAAGTTTACAATTGTTTCATTGGAGAAATTGATTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E357724" ref_strand="+" ref_description="SGN-E357724 [cTOS-24-P15]">
      <seq>tgctctggtaggatggttaagtgaaccatacatgctggatgcttcagataattagttaaaccaagtgtcaagaaagtgtttagatttattttttgtgtgcttgtattttcttttttcttgaaagttaccatctttttttttttttaccaccaagtgccattatcatttgacctgaaaatcaattttttatttcagatcaaattggtgtgtgggggttgatctgaaaaatttgtttatttatgttgttacctaaacaagtttacaattgtttcattggagaaattgattgcgtggatcacggagacctttcatgttactcttttcatttgttatacctctcttaattacttattgttgtatgttagctgtctcgatttgactttggagagttgcagtatattccaagtttatgcaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="50759" stop="51774"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="51059" g_stop="51474" g_length="416"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="416" r_length="416" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E357724" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>416</cumulative_length_of_scored_exons>
        <coverage percentage="0.981" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E357724" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="51059" e_stop="51474"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCTCTGGTAGGATGGTTAAGTGAACCATACATGCTGGATGCTTCAGATAATTAGTTAAACCAAGTGTCAAGAAAGTGTTTAGATTTATTTTTTGTGTGCTTGTATTTTCTTTTTTCTTGAAAGTTACCATCTTTTTTTTTTTTTACCACCAAGTGCCATTATCATTTGACCTGAAAATCAATTTTTTATTTCAGATCAAATTGGTGTGTGGGGGTTGATCTGAAAAATTTGTTTATTTATGTTGTTACCTAAACAAGTTTACAATTGTTTCATTGGAGAAATTGATTGCGTGGATCACGGAGACCTTTCATGTTACTCTTTTCATTTGTTATACCTCTCTTAATTACTTATTGTTGTATGTTAGCTGTCTCGATTTGACTTTGGAGAGTTGCAGTATATTCCAAGTTTATGCAAA</genome_strand>
        <mrna_strand>TGCTCTGGTAGGATGGTTAAGTGAACCATACATGCTGGATGCTTCAGATAATTAGTTAAACCAAGTGTCAAGAAAGTGTTTAGATTTATTTTTTGTGTGCTTGTATTTTCTTTTTTCTTGAAAGTTACCATCTTTTTTTTTTTTTACCACCAAGTGCCATTATCATTTGACCTGAAAATCAATTTTTTATTTCAGATCAAATTGGTGTGTGGGGGTTGATCTGAAAAATTTGTTTATTTATGTTGTTACCTAAACAAGTTTACAATTGTTTCATTGGAGAAATTGATTGCGTGGATCACGGAGACCTTTCATGTTACTCTTTTCATTTGTTATACCTCTCTTAATTACTTATTGTTGTATGTTAGCTGTCTCGATTTGACTTTGGAGAGTTGCAGTATATTCCAAGTTTATGCAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E745416" ref_strand="+" ref_description="SGN-E745416 [GI|47105662]">
      <seq>ggggtactaacaggaagaagcgtcccaattccatccgccatggcaacggcgccagccatttttgtgccttccacttctctcgcttcctccaatgcacgcaagattaatctaagttcatggaacgagaaactggttataccccaaaattttccattctggactcccaagtaccagtctaggaaaccaccgtcatgctccggtaccaatgtcacggtggtccaaggtgatcggaatacaaccgaactaccaatgagtattgacgctcttgacagtttcattcgccttaatttgggaaactggaccggctctttccatcaatttgatggtcatggaaatttgatgcatagaattacaacgaaacttgctgtgggctcttatggtgaaggtgaactgatgagtttattacaaacgttatacatcaaacaacctccatctaccacttcatgttctggcgatgattgtgagtcagagtggtttgagtacaaaatcaaagagaccaacatgtttaccgtcgacaaatatcaacagattggcttcttccccaaggaaaaggcatacgcactaagatatcagactgctggcatgttggagactgtgttaagacagggagtgctaggtgaagatgatatcggagaagaatcaccaagaaatctgaagcttccctctaaacgtccttctattgtatgtgaaaattgtctttattcactggagaaagataggcgagtgagagcatttcatataatggacccaaaaggagtactggaaatgcttcttgttttccttgaagaaagagggaacggagaggccattcctccctcctttgacgatttcaaggaggatactgaaagaattctgcctcatcttggaacttggaaaggtcattcgcgaacaacacgtactggtgtttatggagcaacaattactgaagcaagtacaactgctgttcttgaaatcaacaaggacggccagctaattcaggatatcacgtctacttctggtgcgactaatattacaacaaatgtacattggaccggtaccatatccaatgacctagtgacattcgacggtggtttccagcttactctgttgcctgggggcatttacatgggatacccatctgatgtggccaagaatgtgcaagaatccacagcatttcacgttgagttttgttggctagaatcgcctggcaagagacaaagacttatccgtacttacgatgtagagggctttgctgtttcatctacttatttcatcgagtccaaggtctgagttatttcccctgattcaaaaagatgtgcttcagacatcatatttgctcccgcatgaaccatttttcctgggtacaatcaccaacactgtagtatcaattgtatctatctatctatatatctgtttttataaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="59111" stop="63364"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59410" g_stop="59724" g_length="315"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="315" r_length="315" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59725" i_stop="59914" i_length="190">
            <donor d_prob="0.196" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59915" g_stop="60009" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="316" r_stop="410" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="60010" i_stop="60743" i_length="734">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60744" g_stop="60861" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="411" r_stop="528" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="60862" i_stop="60992" i_length="131">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.442" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="60993" g_stop="61111" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="529" r_stop="647" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="61112" i_stop="61789" i_length="678">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.762" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="61790" g_stop="61976" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="648" r_stop="834" r_length="187" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="61977" i_stop="62107" i_length="131">
            <donor d_prob="0.869" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="62108" g_stop="62251" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="835" r_stop="978" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="62252" i_stop="62632" i_length="381">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.281" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="62633" g_stop="63069" g_length="437"/>
          <reference_exon_boundary r_type="cDNA" r_start="979" r_stop="1415" r_length="437" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E745416" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>1415</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E745416" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59410" e_stop="59724"/>
          <exon e_start="59915" e_stop="60009"/>
          <exon e_start="60744" e_stop="60861"/>
          <exon e_start="60993" e_stop="61111"/>
          <exon e_start="61790" e_stop="61976"/>
          <exon e_start="62108" e_stop="62251"/>
          <exon e_start="62633" e_stop="63069"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGGTACTAACAGGAAGAAGCGTCCCAATTCCATCCGCCATGGCAACGGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCATGTCAGGATCAACTCCGTTCCTCTTTCTCTCTTTCTGTGGATGCATTGTCTTATTTTTGTCTATAACTTTATTATTGATAAATACACGTATATTTATGAATTTTTGATAAATATTCATATCCTATAATTTTTAGTTTGAGGTGGAAACGTGCATGGATTTGATTCCTTCATCTGCTTGATTTATTTTGCAGCAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAACGTGAGCTCCTATAGTTAGATTCTTCCCTGTATTAATAATGTGTCTTAACCTTGCTATGTTTCCGATGAAAAGTAAGTTAAATAGATTAACTGTCCTTAACAATTTTGTAGCTTCTTCGGTGACTAATATGTGTAAAGTATATATGTTAGTTTATACATTCTAACTTTGAGAATGATCCAATCTAATTCTTTTTGTAATTGTGAAATTGCTAGTACTTATGTAATTAGTAATTTAATAAAATTAAAGGTAGTTGTTAGTTATCCGAAGTTAAAAAACTCTTTTGAGATTTAGGAAAAGTTAAATTAGAATTGAGGAGAAAACCATGGAAATTTCAATGTTTACACTTCATTTTACATGGTTATAGTTTAATGGTATGTAGGTGAACTTTAGGGAATACTTGGAAATCCAGGTGATCTCTTTTTCTTGTTTGTGAATTTTGAGAAATTTTCCATTTAGTGGCATGCTATATTTAAGTGCAAGTAGATTTTGTCAGCCCAAAGCTCAAATTCTTCCACTGTTTTAAATAAAGTTGAGTTTGGAGAATTTATTAAGGAGGCCAATGTCACACATGCATTTCTGATTCATAAGCCCCTTTAGTTTGCTTTTTTATCTGCATAGAATTAGTTAGCAGTGGACACCAATGTATAGGGTATTTTCATTAAATTTGGGTACTGTTATATGTGTTCACTTTATGGTCTGGGAAACAAGTCGACTAACCGGCTTCAAAATTGTAGGTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAAATCAAAGAGACCAACATGTTTACCGTCGACAAATATCAACAGGTGAGCTTCACTAAGACAGAGAACTAACTTATATCCCTTCGCTGGTCATACTTAATAAAGACTGTTATCTGCAGTTTCTGTTTCTTTTCAGATTTTATTGCATTTGAGGTACCACTAAAAGTAGTTTGCAGATTGGCTTCTTCCCCAAGGAAAAGGCATACGCACTAAGATATCAGACTGCTGGCATGTTGGAGACTGTGTTAAGACAGGGAGTGCTAGGTGAAGATGATATCGGAGAAGAATCACCAAGGTAAATGTTTCTTACGTGGAGATGAATCAGTCAAAATAAGTTAAAATATTAGATCTGATGAGATCAAAGGTTGAAATTATGCATATGTTTTGCTGCTAGCTTTATTTTGGAAATGCTACCCAGTATGACCTTAATGTTGCTGTTTGTCACTTTTCCCCTTGGCTCTGCTGTGTTCTGGTCTGTGTGCTGTTCTGGTCTGTGTGCTTATCGGTTATGTTTTCAAACATATTCAGTTTTCACCCTGTACTGAAACAAACCAAAAAGGCTAATGCCTAAGAATTTGAGTAAACAAATTCCAAAAGGCAAATAAGACAATCAATATGTAAAGAATCCTCTCATCATAGCAGTAATTAGTTCCCAACTTAAAAGATATCAACTCTGTAAAAGAATCTCACACAATTAAGCATTCATTAGTAGATCTTTCCTACTAACAAATAAATATTGGTGATCTTGGACATCTCATAAGCTTCATCAGATCAATTAACTTGCATATTATTGCTTCTGACTTTCATGTTAGAAATTATAGACAGTCTTTTAATATCCAATTGCAAAGGTTATGTAAATTGCACGGGATCTTTTCTCATGAATGACTGTTCATATTTTTTGATTAGCTTTATCTTTTGGTTCCTGGCTTTGAATTTCTTAGTATCATTCTATAATTCTTCTTTTCTTTCACAGAAATCTGAAGCTTCCCTCTAAACGTCCTTCTATTGTATGTGAAAATTGTCTTTATTCACTGGAGAAAGATAGGCGAGTGAGAGCATTTCATATAATGGACCCAAAAGGAGTACTGGAAATGCTTCTTGTTTTCCTTGAAGAAAGAGGGAACGGAGAGGCCATTCCTCCCTCCTTTGACGATTTCAAGGTAATTTTGACTTGAAAGGGGAAGGGTTGCCCTTCTATTCTTCGTTTGGACTACCTAAACATAGTTTGATTCAACATGTTAGTTACCAGAACCAAATGATTGTTCTTATGCATTCCATGGTCATCTTGTAGGAGGATACTGAAAGAATTCTGCCTCATCTTGGAACTTGGAAAGGTCATTCGCGAACAACACGTACTGGTGTTTATGGAGCAACAATTACTGAAGCAAGTACAACTGCTGTTCTTGAAATCAACAAGGACGGCCAGCTAATTCAGGTTTGTTAGCTCCTTGCAATCAGTTCCTTGTATCAGATAGTTTAGTAATGGTGAACTACTAGTATCCACGAAAGGGGTCATCTGCCCAGTGACACTTGGATAGTAAATGGAATCTCTCTTTCATGCAACTTCTTTGAGAAATGAATTTGAAATAGTTCAATGTTATGATGAATTAGCCGTCTGGATGGATCCTCAGCTATATAGGAAACACAAATGCATTGGTAGAATGGAGTTGTCACCACAAAATTAGCTCAAATATGGGAGGGTGGGGAAAGTTGTGATCTTCTCATTTTTCTTTCTTTCTTTATTTATTTCAGGCACTGAAATGAATATATTTGGTTTCAGCTTTTGGTTGCTAATATATTTCCTTCTTAAATCAAGGATATCACGTCTACTTCTGGTGCGACTAATATTACAACAAATGTACATTGGACCGGTACCATATCCAATAACCTAGTGACATTCGACGGTGGTTTCCAGCTTACTCTGTTGCCTGGGGGCATTTACATGGGATACCCATCTGATGTGGCCAAGAATGTGCAAGAATCCACAGCATTTCACGTTGAGTTTTGTTGGCTAGAATCGCCTGGCAAGAGACAAAGACTTATCCGTACTTACGATGTAGAGGGCTTTGCTGTTTCATCTACTTATTTCATCGAGTCCAAGGTCTGAGTTATTTCCCCTGATTCAAAAAGATGTGCTTCAGACATCATATTTGCTCCCGCATGAACCATTTTTCCTGGGTACAATCACCAACACTGTAGTATCAATTGTATCTATCTATCTATATATCTGTTTTTATATATAGAATAATTGTG</genome_strand>
        <mrna_strand>GGGGTACTAACAGGAAGAAGCGTCCCAATTCCATCCGCCATGGCAACGGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCAT..............................................................................................................................................................................................CAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAAATCAAAGAGACCAACATGTTTACCGTCGACAAATATCAACAG...................................................................................................................................ATTGGCTTCTTCCCCAAGGAAAAGGCATACGCACTAAGATATCAGACTGCTGGCATGTTGGAGACTGTGTTAAGACAGGGAGTGCTAGGTGAAGATGATATCGGAGAAGAATCACCAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATCTGAAGCTTCCCTCTAAACGTCCTTCTATTGTATGTGAAAATTGTCTTTATTCACTGGAGAAAGATAGGCGAGTGAGAGCATTTCATATAATGGACCCAAAAGGAGTACTGGAAATGCTTCTTGTTTTCCTTGAAGAAAGAGGGAACGGAGAGGCCATTCCTCCCTCCTTTGACGATTTCAAG...................................................................................................................................GAGGATACTGAAAGAATTCTGCCTCATCTTGGAACTTGGAAAGGTCATTCGCGAACAACACGTACTGGTGTTTATGGAGCAACAATTACTGAAGCAAGTACAACTGCTGTTCTTGAAATCAACAAGGACGGCCAGCTAATTCAG.............................................................................................................................................................................................................................................................................................................................................................................................GATATCACGTCTACTTCTGGTGCGACTAATATTACAACAAATGTACATTGGACCGGTACCATATCCAATGACCTAGTGACATTCGACGGTGGTTTCCAGCTTACTCTGTTGCCTGGGGGCATTTACATGGGATACCCATCTGATGTGGCCAAGAATGTGCAAGAATCCACAGCATTTCACGTTGAGTTTTGTTGGCTAGAATCGCCTGGCAAGAGACAAAGACTTATCCGTACTTACGATGTAGAGGGCTTTGCTGTTTCATCTACTTATTTCATCGAGTCCAAGGTCTGAGTTATTTCCCCTGATTCAAAAAGATGTGCTTCAGACATCATATTTGCTCCCGCATGAACCATTTTTCCTGGGTACAATCACCAACACTGTAGTATCAATTGTATCTATCTATCTATATATCTGTTTTTATAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E280018" ref_strand="-" ref_description="SGN-E280018 [cLEL-7-E10](-)">
      <seq>gcacgagcccaattccatccgccatggcaacggcgccagccatttttgggccttccacttctctcgcttcctccaatgcacgcaagattaatctaagttcatggaacgagaaactggttataccccaaaattttccattctggactcccaagtaccagtctaggaaaccaccgtcatgctccggtaccaatgtcacggtggtccaaggtgatcggaatacaaccgaactaccaatgagtattgacgctcttgacagtttcattcgccttaatttgggaaactggaccggctctttccatcaatttgatggtcatggaaatttgatgcatagaattacaacgaaacttgctgtgggctcttatggtgaaggtgaactgatgagtttattacaaacgttatacatcaaacaacctccatctaccacttcatgttctggcgatgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="59127" stop="61092"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59426" g_stop="59724" g_length="299"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="299" r_length="299" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59725" i_stop="59914" i_length="190">
            <donor d_prob="0.196" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59915" g_stop="60009" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="300" r_stop="394" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="60010" i_stop="60743" i_length="734">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60744" g_stop="60792" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="395" r_stop="443" r_length="49" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E280018" ref_strand="-">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>443</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E280018" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="59426" e_stop="59724"/>
          <exon e_start="59915" e_stop="60009"/>
          <exon e_start="60744" e_stop="60792"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGCGTCCCAATTCCATCCGCCATGGCAACGGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCATGTCAGGATCAACTCCGTTCCTCTTTCTCTCTTTCTGTGGATGCATTGTCTTATTTTTGTCTATAACTTTATTATTGATAAATACACGTATATTTATGAATTTTTGATAAATATTCATATCCTATAATTTTTAGTTTGAGGTGGAAACGTGCATGGATTTGATTCCTTCATCTGCTTGATTTATTTTGCAGCAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAACGTGAGCTCCTATAGTTAGATTCTTCCCTGTATTAATAATGTGTCTTAACCTTGCTATGTTTCCGATGAAAAGTAAGTTAAATAGATTAACTGTCCTTAACAATTTTGTAGCTTCTTCGGTGACTAATATGTGTAAAGTATATATGTTAGTTTATACATTCTAACTTTGAGAATGATCCAATCTAATTCTTTTTGTAATTGTGAAATTGCTAGTACTTATGTAATTAGTAATTTAATAAAATTAAAGGTAGTTGTTAGTTATCCGAAGTTAAAAAACTCTTTTGAGATTTAGGAAAAGTTAAATTAGAATTGAGGAGAAAACCATGGAAATTTCAATGTTTACACTTCATTTTACATGGTTATAGTTTAATGGTATGTAGGTGAACTTTAGGGAATACTTGGAAATCCAGGTGATCTCTTTTTCTTGTTTGTGAATTTTGAGAAATTTTCCATTTAGTGGCATGCTATATTTAAGTGCAAGTAGATTTTGTCAGCCCAAAGCTCAAATTCTTCCACTGTTTTAAATAAAGTTGAGTTTGGAGAATTTATTAAGGAGGCCAATGTCACACATGCATTTCTGATTCATAAGCCCCTTTAGTTTGCTTTTTTATCTGCATAGAATTAGTTAGCAGTGGACACCAATGTATAGGGTATTTTCATTAAATTTGGGTACTGTTATATGTGTTCACTTTATGGTCTGGGAAACAAGTCGACTAACCGGCTTCAAAATTGTAGGTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGAT</genome_strand>
        <mrna_strand>GCACGAGCCCAATTCCATCCGCCATGGCAACGGCGCCAGCCATTTTTGGGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCAT..............................................................................................................................................................................................CAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E254139" ref_strand="+" ref_description="SGN-E254139 [cLEG-34-M5]">
      <seq>aagcgtcccaatttcatccgccatggcaacggcgccagccatttgggtgccttggacttctctcgcttcctccaatgcacgcaagattaatctaagttcatggaacgagaaactggttataccccaaaattttccattctggactcccaagtaccagtctaggaaaccaccgtcatgctccggtaccaatgtcacggtggtccaaggtgatcggaatacaaccgaactaccaatgagtattgacgctcttgacagtttcattcgccttaatttgggaaactggaccggctctttccatcaatttgatgggcatggaaatttgatgcatagaattacaacgaaacttgctgtgggctcttatggtgaaggggaactgatgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="59127" stop="60297"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59427" g_stop="59724" g_length="298"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="298" r_length="298" r_score="0.983"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59725" i_stop="59914" i_length="190">
            <donor d_prob="0.196" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59915" g_stop="59997" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="299" r_stop="381" r_length="83" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E254139" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>381</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E254139" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59427" e_stop="59724"/>
          <exon e_start="59915" e_stop="59997"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGCGTCCCAATTCCATCCGCCATGGCAACGGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCATGTCAGGATCAACTCCGTTCCTCTTTCTCTCTTTCTGTGGATGCATTGTCTTATTTTTGTCTATAACTTTATTATTGATAAATACACGTATATTTATGAATTTTTGATAAATATTCATATCCTATAATTTTTAGTTTGAGGTGGAAACGTGCATGGATTTGATTCCTTCATCTGCTTGATTTATTTTGCAGCAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAG</genome_strand>
        <mrna_strand>AAGCGTCCCAATTTCATCCGCCATGGCAACGGCGCCAGCCATTTGGGTGCCTTGGACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCAT..............................................................................................................................................................................................CAATTTGATGGGCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGGGAACTGATGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E214601" ref_strand="+" ref_description="SGN-E214601 [cLEC-79-C17]">
      <seq>agcgtcccaattccatccgccatggcaacggcgccagccatttttgtgccttccacttctctcgcttcctccaatgcacgcaagattaatctaagttcatggaacgagaaactggttataccccaaaattttccattctggactcccaagtaccagtctaggaaaccaccgtcatgctccggtaccaatgtcacggtggtccaaggtgatcggaatacaaccgaactaccaatgagtattgacgctcttgacagtttcattcgccttaatttgggaaactggaccggctctttccatcaatttgatggtcatggaaatttgatgcatagaattacaacgaaacttgctgtgggctcttatggtgaaggtgaactgatgagtttattacaaacgttatacatcaaacaacctccatctaccacttcatgttctggcgatgattgtgagtcagagtggtttgagtacaaaatcaaagagaccaacatgtttaccgtcgaacaatatcaacagattggcttcttccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="59128" stop="61170"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59428" g_stop="59724" g_length="297"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="297" r_length="297" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59725" i_stop="59914" i_length="190">
            <donor d_prob="0.196" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59915" g_stop="60009" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="298" r_stop="392" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="60010" i_stop="60743" i_length="734">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60744" g_stop="60861" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="393" r_stop="510" r_length="118" r_score="0.983"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="60862" i_stop="60992" i_length="131">
            <donor d_prob="0.994" d_score="0.96"/>
            <acceptor a_prob="0.442" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="60993" g_stop="61006" g_length="14"/>
          <reference_exon_boundary r_type="cDNA" r_start="511" r_stop="524" r_length="14" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E214601" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>524</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E214601" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59428" e_stop="59724"/>
          <exon e_start="59915" e_stop="60009"/>
          <exon e_start="60744" e_stop="60861"/>
          <exon e_start="60993" e_stop="61006"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCGTCCCAATTCCATCCGCCATGGCAACGGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCATGTCAGGATCAACTCCGTTCCTCTTTCTCTCTTTCTGTGGATGCATTGTCTTATTTTTGTCTATAACTTTATTATTGATAAATACACGTATATTTATGAATTTTTGATAAATATTCATATCCTATAATTTTTAGTTTGAGGTGGAAACGTGCATGGATTTGATTCCTTCATCTGCTTGATTTATTTTGCAGCAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAACGTGAGCTCCTATAGTTAGATTCTTCCCTGTATTAATAATGTGTCTTAACCTTGCTATGTTTCCGATGAAAAGTAAGTTAAATAGATTAACTGTCCTTAACAATTTTGTAGCTTCTTCGGTGACTAATATGTGTAAAGTATATATGTTAGTTTATACATTCTAACTTTGAGAATGATCCAATCTAATTCTTTTTGTAATTGTGAAATTGCTAGTACTTATGTAATTAGTAATTTAATAAAATTAAAGGTAGTTGTTAGTTATCCGAAGTTAAAAAACTCTTTTGAGATTTAGGAAAAGTTAAATTAGAATTGAGGAGAAAACCATGGAAATTTCAATGTTTACACTTCATTTTACATGGTTATAGTTTAATGGTATGTAGGTGAACTTTAGGGAATACTTGGAAATCCAGGTGATCTCTTTTTCTTGTTTGTGAATTTTGAGAAATTTTCCATTTAGTGGCATGCTATATTTAAGTGCAAGTAGATTTTGTCAGCCCAAAGCTCAAATTCTTCCACTGTTTTAAATAAAGTTGAGTTTGGAGAATTTATTAAGGAGGCCAATGTCACACATGCATTTCTGATTCATAAGCCCCTTTAGTTTGCTTTTTTATCTGCATAGAATTAGTTAGCAGTGGACACCAATGTATAGGGTATTTTCATTAAATTTGGGTACTGTTATATGTGTTCACTTTATGGTCTGGGAAACAAGTCGACTAACCGGCTTCAAAATTGTAGGTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAAATCAAAGAGACCAACATGTTTACCGTCGACAAATATCAACAGGTGAGCTTCACTAAGACAGAGAACTAACTTATATCCCTTCGCTGGTCATACTTAATAAAGACTGTTATCTGCAGTTTCTGTTTCTTTTCAGATTTTATTGCATTTGAGGTACCACTAAAAGTAGTTTGCAGATTGGCTTCTTCCC</genome_strand>
        <mrna_strand>AGCGTCCCAATTCCATCCGCCATGGCAACGGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCAT..............................................................................................................................................................................................CAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAAATCAAAGAGACCAACATGTTTACCGTCGAACAATATCAACAG...................................................................................................................................ATTGGCTTCTTCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E708760" ref_strand="+" ref_description="SGN-E708760 [FA36CG08]">
      <seq>ctctcaattccatccgccatggcaacggcgccagccatttttgtgccttccacttctctcgcttcctccaatgcacgcaagattaatctaagttcatggaacgagaaactggttataccccaaaattttccattctggactcccaagtaccagtctaggaaaccaccgtcatgctccggtaccaatgtcacggtggtccaaggtgatcggaatacaaccgaactaccaatgagtattgacgctcttgacagtttcattcgccttaatttgggaaactggaccggctctttccatcaatttgatggtcatggaaatttgatgcatagaattacaacgaaacttgctgtgggctcttatggtgaaggtgaactgatgagtttattacaaacgttatacatcaaacaacctccatctaccacttcatgttctggcgatgattgtgagtcagagtggtttgagtacaaaatcaaagagaccaacatgtttaccgtcgacaaatatcaacagattggcttcttccccaaggaaaaggcatacgcactaagatatcagactgctggcatgttggagactgtgttaagacagggagtgctaggtgaagatgatatcggagaagaatcaccaagaaatctgaagcttccctctaaacgtccttctattgtatgtgaaaattgtctttattcactggagaaagataggcgagtgagagcatttcatataatggacccaaaaggagtactggaaatgcttcttgttttccttgaagaaagagggaacggagaggccattcctccctcctttgacgatttcaaggaggatactgaaagaattctgcctcatcttggaacttggaaaggtcatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="59132" stop="62456"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59431" g_stop="59724" g_length="294"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="294" r_length="294" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59725" i_stop="59914" i_length="190">
            <donor d_prob="0.196" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59915" g_stop="60009" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="295" r_stop="389" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="60010" i_stop="60743" i_length="734">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60744" g_stop="60861" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="390" r_stop="507" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="60862" i_stop="60992" i_length="131">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.442" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="60993" g_stop="61111" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="508" r_stop="626" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="61112" i_stop="61789" i_length="678">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.762" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="61790" g_stop="61976" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="627" r_stop="813" r_length="187" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="61977" i_stop="62107" i_length="131">
            <donor d_prob="0.869" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="62108" g_stop="62156" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="814" r_stop="862" r_length="49" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E708760" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>862</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E708760" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59431" e_stop="59724"/>
          <exon e_start="59915" e_stop="60009"/>
          <exon e_start="60744" e_stop="60861"/>
          <exon e_start="60993" e_stop="61111"/>
          <exon e_start="61790" e_stop="61976"/>
          <exon e_start="62108" e_stop="62156"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCCCAATTCCATCCGCCATGGCAACGGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCATGTCAGGATCAACTCCGTTCCTCTTTCTCTCTTTCTGTGGATGCATTGTCTTATTTTTGTCTATAACTTTATTATTGATAAATACACGTATATTTATGAATTTTTGATAAATATTCATATCCTATAATTTTTAGTTTGAGGTGGAAACGTGCATGGATTTGATTCCTTCATCTGCTTGATTTATTTTGCAGCAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAACGTGAGCTCCTATAGTTAGATTCTTCCCTGTATTAATAATGTGTCTTAACCTTGCTATGTTTCCGATGAAAAGTAAGTTAAATAGATTAACTGTCCTTAACAATTTTGTAGCTTCTTCGGTGACTAATATGTGTAAAGTATATATGTTAGTTTATACATTCTAACTTTGAGAATGATCCAATCTAATTCTTTTTGTAATTGTGAAATTGCTAGTACTTATGTAATTAGTAATTTAATAAAATTAAAGGTAGTTGTTAGTTATCCGAAGTTAAAAAACTCTTTTGAGATTTAGGAAAAGTTAAATTAGAATTGAGGAGAAAACCATGGAAATTTCAATGTTTACACTTCATTTTACATGGTTATAGTTTAATGGTATGTAGGTGAACTTTAGGGAATACTTGGAAATCCAGGTGATCTCTTTTTCTTGTTTGTGAATTTTGAGAAATTTTCCATTTAGTGGCATGCTATATTTAAGTGCAAGTAGATTTTGTCAGCCCAAAGCTCAAATTCTTCCACTGTTTTAAATAAAGTTGAGTTTGGAGAATTTATTAAGGAGGCCAATGTCACACATGCATTTCTGATTCATAAGCCCCTTTAGTTTGCTTTTTTATCTGCATAGAATTAGTTAGCAGTGGACACCAATGTATAGGGTATTTTCATTAAATTTGGGTACTGTTATATGTGTTCACTTTATGGTCTGGGAAACAAGTCGACTAACCGGCTTCAAAATTGTAGGTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAAATCAAAGAGACCAACATGTTTACCGTCGACAAATATCAACAGGTGAGCTTCACTAAGACAGAGAACTAACTTATATCCCTTCGCTGGTCATACTTAATAAAGACTGTTATCTGCAGTTTCTGTTTCTTTTCAGATTTTATTGCATTTGAGGTACCACTAAAAGTAGTTTGCAGATTGGCTTCTTCCCCAAGGAAAAGGCATACGCACTAAGATATCAGACTGCTGGCATGTTGGAGACTGTGTTAAGACAGGGAGTGCTAGGTGAAGATGATATCGGAGAAGAATCACCAAGGTAAATGTTTCTTACGTGGAGATGAATCAGTCAAAATAAGTTAAAATATTAGATCTGATGAGATCAAAGGTTGAAATTATGCATATGTTTTGCTGCTAGCTTTATTTTGGAAATGCTACCCAGTATGACCTTAATGTTGCTGTTTGTCACTTTTCCCCTTGGCTCTGCTGTGTTCTGGTCTGTGTGCTGTTCTGGTCTGTGTGCTTATCGGTTATGTTTTCAAACATATTCAGTTTTCACCCTGTACTGAAACAAACCAAAAAGGCTAATGCCTAAGAATTTGAGTAAACAAATTCCAAAAGGCAAATAAGACAATCAATATGTAAAGAATCCTCTCATCATAGCAGTAATTAGTTCCCAACTTAAAAGATATCAACTCTGTAAAAGAATCTCACACAATTAAGCATTCATTAGTAGATCTTTCCTACTAACAAATAAATATTGGTGATCTTGGACATCTCATAAGCTTCATCAGATCAATTAACTTGCATATTATTGCTTCTGACTTTCATGTTAGAAATTATAGACAGTCTTTTAATATCCAATTGCAAAGGTTATGTAAATTGCACGGGATCTTTTCTCATGAATGACTGTTCATATTTTTTGATTAGCTTTATCTTTTGGTTCCTGGCTTTGAATTTCTTAGTATCATTCTATAATTCTTCTTTTCTTTCACAGAAATCTGAAGCTTCCCTCTAAACGTCCTTCTATTGTATGTGAAAATTGTCTTTATTCACTGGAGAAAGATAGGCGAGTGAGAGCATTTCATATAATGGACCCAAAAGGAGTACTGGAAATGCTTCTTGTTTTCCTTGAAGAAAGAGGGAACGGAGAGGCCATTCCTCCCTCCTTTGACGATTTCAAGGTAATTTTGACTTGAAAGGGGAAGGGTTGCCCTTCTATTCTTCGTTTGGACTACCTAAACATAGTTTGATTCAACATGTTAGTTACCAGAACCAAATGATTGTTCTTATGCATTCCATGGTCATCTTGTAGGAGGATACTGAAAGAATTCTGCCTCATCTTGGAACTTGGAAAGGTCATT</genome_strand>
        <mrna_strand>CTCTCAATTCCATCCGCCATGGCAACGGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCAT..............................................................................................................................................................................................CAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAAATCAAAGAGACCAACATGTTTACCGTCGACAAATATCAACAG...................................................................................................................................ATTGGCTTCTTCCCCAAGGAAAAGGCATACGCACTAAGATATCAGACTGCTGGCATGTTGGAGACTGTGTTAAGACAGGGAGTGCTAGGTGAAGATGATATCGGAGAAGAATCACCAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATCTGAAGCTTCCCTCTAAACGTCCTTCTATTGTATGTGAAAATTGTCTTTATTCACTGGAGAAAGATAGGCGAGTGAGAGCATTTCATATAATGGACCCAAAAGGAGTACTGGAAATGCTTCTTGTTTTCCTTGAAGAAAGAGGGAACGGAGAGGCCATTCCTCCCTCCTTTGACGATTTCAAG...................................................................................................................................GAGGATACTGAAAGAATTCTGCCTCATCTTGGAACTTGGAAAGGTCATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E740139" ref_strand="+" ref_description="SGN-E740139 [LC20BA05]">
      <seq>cccaattccatccgccatggcaacggcgccagccatttttgtgccttccacttctctcgcttcctccaatgcacgcaagattaatctaagttcatggaacgagaaactggttataccccaaaattttccattctggactcccaagtaccagtctaggaaaccaccgtcatgctccggtaccaatgtcacggtggtccaaggtgatcggaatacaaccgaactaccaatgagtattgacgctcttgacagtttcattcgccttaatttgggaaactggaccggctctttccatcaatttgatggtcatggaaatttgatgcatagaattacaacgaaacttgctgtgggctcttatggtgaaggtgaactgatgagtttattacaaacgttatacatcaaacaacctccatctaccacttcatgttctggcgatgattgtgagtcagagtggtttgagtacaaaatcaaagagaccaacatgtttaccgtcgacaaatatcaacagattggcttcttccccaaggaaaaggcatacgcactaagatatcagactgctggcatgttggagactgtgttaagacagggagtgctaggtgaagatgatatcggagaagaatcaccaagaaatctgaagcttccctctaaacgtccttctattgtatgtgaaaattgtctttattcactggagaaagataggcgagtgagagcatttcatataatggacccaaaaggagtactggaaatgcttcttgttttccttgaagaaagagggaacggagaggccattcctccctcctttgacgatttcaaggaggatactgaaagaattctgcctcatcttggaacttggaaaggtcattcgcgaaacacacgtactggtgtttatggagcaacaattactgaagcaagtacaactgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="59133" stop="62515"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59433" g_stop="59724" g_length="292"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="292" r_length="292" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59725" i_stop="59914" i_length="190">
            <donor d_prob="0.196" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59915" g_stop="60009" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="293" r_stop="387" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="60010" i_stop="60743" i_length="734">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60744" g_stop="60861" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="388" r_stop="505" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="60862" i_stop="60992" i_length="131">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.442" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="60993" g_stop="61111" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="506" r_stop="624" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="61112" i_stop="61789" i_length="678">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.762" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="61790" g_stop="61976" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="625" r_stop="811" r_length="187" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="61977" i_stop="62107" i_length="131">
            <donor d_prob="0.869" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="62108" g_stop="62215" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="812" r_stop="919" r_length="108" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E740139" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>919</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E740139" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59433" e_stop="59724"/>
          <exon e_start="59915" e_stop="60009"/>
          <exon e_start="60744" e_stop="60861"/>
          <exon e_start="60993" e_stop="61111"/>
          <exon e_start="61790" e_stop="61976"/>
          <exon e_start="62108" e_stop="62215"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCAATTCCATCCGCCATGGCAACGGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCATGTCAGGATCAACTCCGTTCCTCTTTCTCTCTTTCTGTGGATGCATTGTCTTATTTTTGTCTATAACTTTATTATTGATAAATACACGTATATTTATGAATTTTTGATAAATATTCATATCCTATAATTTTTAGTTTGAGGTGGAAACGTGCATGGATTTGATTCCTTCATCTGCTTGATTTATTTTGCAGCAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAACGTGAGCTCCTATAGTTAGATTCTTCCCTGTATTAATAATGTGTCTTAACCTTGCTATGTTTCCGATGAAAAGTAAGTTAAATAGATTAACTGTCCTTAACAATTTTGTAGCTTCTTCGGTGACTAATATGTGTAAAGTATATATGTTAGTTTATACATTCTAACTTTGAGAATGATCCAATCTAATTCTTTTTGTAATTGTGAAATTGCTAGTACTTATGTAATTAGTAATTTAATAAAATTAAAGGTAGTTGTTAGTTATCCGAAGTTAAAAAACTCTTTTGAGATTTAGGAAAAGTTAAATTAGAATTGAGGAGAAAACCATGGAAATTTCAATGTTTACACTTCATTTTACATGGTTATAGTTTAATGGTATGTAGGTGAACTTTAGGGAATACTTGGAAATCCAGGTGATCTCTTTTTCTTGTTTGTGAATTTTGAGAAATTTTCCATTTAGTGGCATGCTATATTTAAGTGCAAGTAGATTTTGTCAGCCCAAAGCTCAAATTCTTCCACTGTTTTAAATAAAGTTGAGTTTGGAGAATTTATTAAGGAGGCCAATGTCACACATGCATTTCTGATTCATAAGCCCCTTTAGTTTGCTTTTTTATCTGCATAGAATTAGTTAGCAGTGGACACCAATGTATAGGGTATTTTCATTAAATTTGGGTACTGTTATATGTGTTCACTTTATGGTCTGGGAAACAAGTCGACTAACCGGCTTCAAAATTGTAGGTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAAATCAAAGAGACCAACATGTTTACCGTCGACAAATATCAACAGGTGAGCTTCACTAAGACAGAGAACTAACTTATATCCCTTCGCTGGTCATACTTAATAAAGACTGTTATCTGCAGTTTCTGTTTCTTTTCAGATTTTATTGCATTTGAGGTACCACTAAAAGTAGTTTGCAGATTGGCTTCTTCCCCAAGGAAAAGGCATACGCACTAAGATATCAGACTGCTGGCATGTTGGAGACTGTGTTAAGACAGGGAGTGCTAGGTGAAGATGATATCGGAGAAGAATCACCAAGGTAAATGTTTCTTACGTGGAGATGAATCAGTCAAAATAAGTTAAAATATTAGATCTGATGAGATCAAAGGTTGAAATTATGCATATGTTTTGCTGCTAGCTTTATTTTGGAAATGCTACCCAGTATGACCTTAATGTTGCTGTTTGTCACTTTTCCCCTTGGCTCTGCTGTGTTCTGGTCTGTGTGCTGTTCTGGTCTGTGTGCTTATCGGTTATGTTTTCAAACATATTCAGTTTTCACCCTGTACTGAAACAAACCAAAAAGGCTAATGCCTAAGAATTTGAGTAAACAAATTCCAAAAGGCAAATAAGACAATCAATATGTAAAGAATCCTCTCATCATAGCAGTAATTAGTTCCCAACTTAAAAGATATCAACTCTGTAAAAGAATCTCACACAATTAAGCATTCATTAGTAGATCTTTCCTACTAACAAATAAATATTGGTGATCTTGGACATCTCATAAGCTTCATCAGATCAATTAACTTGCATATTATTGCTTCTGACTTTCATGTTAGAAATTATAGACAGTCTTTTAATATCCAATTGCAAAGGTTATGTAAATTGCACGGGATCTTTTCTCATGAATGACTGTTCATATTTTTTGATTAGCTTTATCTTTTGGTTCCTGGCTTTGAATTTCTTAGTATCATTCTATAATTCTTCTTTTCTTTCACAGAAATCTGAAGCTTCCCTCTAAACGTCCTTCTATTGTATGTGAAAATTGTCTTTATTCACTGGAGAAAGATAGGCGAGTGAGAGCATTTCATATAATGGACCCAAAAGGAGTACTGGAAATGCTTCTTGTTTTCCTTGAAGAAAGAGGGAACGGAGAGGCCATTCCTCCCTCCTTTGACGATTTCAAGGTAATTTTGACTTGAAAGGGGAAGGGTTGCCCTTCTATTCTTCGTTTGGACTACCTAAACATAGTTTGATTCAACATGTTAGTTACCAGAACCAAATGATTGTTCTTATGCATTCCATGGTCATCTTGTAGGAGGATACTGAAAGAATTCTGCCTCATCTTGGAACTTGGAAAGGTCATTCGCGAACAACACGTACTGGTGTTTATGGAGCAACAATTACTGAAGCAAGTACAACTGCT</genome_strand>
        <mrna_strand>CCCAATTCCATCCGCCATGGCAACGGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCAT..............................................................................................................................................................................................CAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAAATCAAAGAGACCAACATGTTTACCGTCGACAAATATCAACAG...................................................................................................................................ATTGGCTTCTTCCCCAAGGAAAAGGCATACGCACTAAGATATCAGACTGCTGGCATGTTGGAGACTGTGTTAAGACAGGGAGTGCTAGGTGAAGATGATATCGGAGAAGAATCACCAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATCTGAAGCTTCCCTCTAAACGTCCTTCTATTGTATGTGAAAATTGTCTTTATTCACTGGAGAAAGATAGGCGAGTGAGAGCATTTCATATAATGGACCCAAAAGGAGTACTGGAAATGCTTCTTGTTTTCCTTGAAGAAAGAGGGAACGGAGAGGCCATTCCTCCCTCCTTTGACGATTTCAAG...................................................................................................................................GAGGATACTGAAAGAATTCTGCCTCATCTTGGAACTTGGAAAGGTCATTCGCGAAACACACGTACTGGTGTTTATGGAGCAACAATTACTGAAGCAAGTACAACTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E738062" ref_strand="+" ref_description="SGN-E738062 [LC12AH10]">
      <seq>ccctattccatccgccatggcaacggcgccagccatttttgtgccttccacttctctcgcttcctccaatgcacgcaagattaatctaagttcatggaacgagaaactggttataccccaaaattttccattctggactcccaagtaccagtctaggaaaccaccgtcatgctccggtaccaatgtcacggtggtccaaggtgatcggaatacaaccgaactaccaatgagtattgacgctcttgacagtttcattcgccttaatttgggaaactggaccggctctttccatcaatttgatggtcatggaaatttgatgcatagaattacaacgaaacttgctgtgggctcttatggtgaaggtgaactgatgagtttattacaaacgttatacatcaaacaacctccatctaccacttcatgttctggcgatgattgtgagtcagagtggtttgagtacaaaatcaaagagaccaacatgtttaccgtcgacaaatatcaacagattggcttcttccccaaggaaaaggcatacgcactaagatatcagactgctggcatgttggagactgtgttaagacagggagtgctaggtgaagatgatatcggagaagaatcaccaagaaatctgaagcttccctctaaacgtccttctattgtatgtgaaaattgtctttattcactggagaaagataggcgagtgagagcatttcatataatggacccaaaaggagtactggaaatgcttcttgttttccttgaagaaagagggaacggagaggccattcctccctcttttgacgatttcaaggaggatactgaaagaattctgcctcatcttggaacttggaaaggtcattcgcgaacaacacgtactggtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="59133" stop="62477"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59433" g_stop="59724" g_length="292"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="292" r_length="292" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59725" i_stop="59914" i_length="190">
            <donor d_prob="0.196" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59915" g_stop="60009" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="293" r_stop="387" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="60010" i_stop="60743" i_length="734">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60744" g_stop="60861" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="388" r_stop="505" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="60862" i_stop="60992" i_length="131">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.442" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="60993" g_stop="61111" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="506" r_stop="624" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="61112" i_stop="61789" i_length="678">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.762" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="61790" g_stop="61976" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="625" r_stop="811" r_length="187" r_score="0.995"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="61977" i_stop="62107" i_length="131">
            <donor d_prob="0.869" d_score="0.98"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="62108" g_stop="62177" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="812" r_stop="881" r_length="70" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E738062" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>881</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E738062" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59433" e_stop="59724"/>
          <exon e_start="59915" e_stop="60009"/>
          <exon e_start="60744" e_stop="60861"/>
          <exon e_start="60993" e_stop="61111"/>
          <exon e_start="61790" e_stop="61976"/>
          <exon e_start="62108" e_stop="62177"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCAATTCCATCCGCCATGGCAACGGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCATGTCAGGATCAACTCCGTTCCTCTTTCTCTCTTTCTGTGGATGCATTGTCTTATTTTTGTCTATAACTTTATTATTGATAAATACACGTATATTTATGAATTTTTGATAAATATTCATATCCTATAATTTTTAGTTTGAGGTGGAAACGTGCATGGATTTGATTCCTTCATCTGCTTGATTTATTTTGCAGCAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAACGTGAGCTCCTATAGTTAGATTCTTCCCTGTATTAATAATGTGTCTTAACCTTGCTATGTTTCCGATGAAAAGTAAGTTAAATAGATTAACTGTCCTTAACAATTTTGTAGCTTCTTCGGTGACTAATATGTGTAAAGTATATATGTTAGTTTATACATTCTAACTTTGAGAATGATCCAATCTAATTCTTTTTGTAATTGTGAAATTGCTAGTACTTATGTAATTAGTAATTTAATAAAATTAAAGGTAGTTGTTAGTTATCCGAAGTTAAAAAACTCTTTTGAGATTTAGGAAAAGTTAAATTAGAATTGAGGAGAAAACCATGGAAATTTCAATGTTTACACTTCATTTTACATGGTTATAGTTTAATGGTATGTAGGTGAACTTTAGGGAATACTTGGAAATCCAGGTGATCTCTTTTTCTTGTTTGTGAATTTTGAGAAATTTTCCATTTAGTGGCATGCTATATTTAAGTGCAAGTAGATTTTGTCAGCCCAAAGCTCAAATTCTTCCACTGTTTTAAATAAAGTTGAGTTTGGAGAATTTATTAAGGAGGCCAATGTCACACATGCATTTCTGATTCATAAGCCCCTTTAGTTTGCTTTTTTATCTGCATAGAATTAGTTAGCAGTGGACACCAATGTATAGGGTATTTTCATTAAATTTGGGTACTGTTATATGTGTTCACTTTATGGTCTGGGAAACAAGTCGACTAACCGGCTTCAAAATTGTAGGTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAAATCAAAGAGACCAACATGTTTACCGTCGACAAATATCAACAGGTGAGCTTCACTAAGACAGAGAACTAACTTATATCCCTTCGCTGGTCATACTTAATAAAGACTGTTATCTGCAGTTTCTGTTTCTTTTCAGATTTTATTGCATTTGAGGTACCACTAAAAGTAGTTTGCAGATTGGCTTCTTCCCCAAGGAAAAGGCATACGCACTAAGATATCAGACTGCTGGCATGTTGGAGACTGTGTTAAGACAGGGAGTGCTAGGTGAAGATGATATCGGAGAAGAATCACCAAGGTAAATGTTTCTTACGTGGAGATGAATCAGTCAAAATAAGTTAAAATATTAGATCTGATGAGATCAAAGGTTGAAATTATGCATATGTTTTGCTGCTAGCTTTATTTTGGAAATGCTACCCAGTATGACCTTAATGTTGCTGTTTGTCACTTTTCCCCTTGGCTCTGCTGTGTTCTGGTCTGTGTGCTGTTCTGGTCTGTGTGCTTATCGGTTATGTTTTCAAACATATTCAGTTTTCACCCTGTACTGAAACAAACCAAAAAGGCTAATGCCTAAGAATTTGAGTAAACAAATTCCAAAAGGCAAATAAGACAATCAATATGTAAAGAATCCTCTCATCATAGCAGTAATTAGTTCCCAACTTAAAAGATATCAACTCTGTAAAAGAATCTCACACAATTAAGCATTCATTAGTAGATCTTTCCTACTAACAAATAAATATTGGTGATCTTGGACATCTCATAAGCTTCATCAGATCAATTAACTTGCATATTATTGCTTCTGACTTTCATGTTAGAAATTATAGACAGTCTTTTAATATCCAATTGCAAAGGTTATGTAAATTGCACGGGATCTTTTCTCATGAATGACTGTTCATATTTTTTGATTAGCTTTATCTTTTGGTTCCTGGCTTTGAATTTCTTAGTATCATTCTATAATTCTTCTTTTCTTTCACAGAAATCTGAAGCTTCCCTCTAAACGTCCTTCTATTGTATGTGAAAATTGTCTTTATTCACTGGAGAAAGATAGGCGAGTGAGAGCATTTCATATAATGGACCCAAAAGGAGTACTGGAAATGCTTCTTGTTTTCCTTGAAGAAAGAGGGAACGGAGAGGCCATTCCTCCCTCCTTTGACGATTTCAAGGTAATTTTGACTTGAAAGGGGAAGGGTTGCCCTTCTATTCTTCGTTTGGACTACCTAAACATAGTTTGATTCAACATGTTAGTTACCAGAACCAAATGATTGTTCTTATGCATTCCATGGTCATCTTGTAGGAGGATACTGAAAGAATTCTGCCTCATCTTGGAACTTGGAAAGGTCATTCGCGAACAACACGTACTGGTG</genome_strand>
        <mrna_strand>CCCTATTCCATCCGCCATGGCAACGGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCAT..............................................................................................................................................................................................CAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAAATCAAAGAGACCAACATGTTTACCGTCGACAAATATCAACAG...................................................................................................................................ATTGGCTTCTTCCCCAAGGAAAAGGCATACGCACTAAGATATCAGACTGCTGGCATGTTGGAGACTGTGTTAAGACAGGGAGTGCTAGGTGAAGATGATATCGGAGAAGAATCACCAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATCTGAAGCTTCCCTCTAAACGTCCTTCTATTGTATGTGAAAATTGTCTTTATTCACTGGAGAAAGATAGGCGAGTGAGAGCATTTCATATAATGGACCCAAAAGGAGTACTGGAAATGCTTCTTGTTTTCCTTGAAGAAAGAGGGAACGGAGAGGCCATTCCTCCCTCTTTTGACGATTTCAAG...................................................................................................................................GAGGATACTGAAAGAATTCTGCCTCATCTTGGAACTTGGAAAGGTCATTCGCGAACAACACGTACTGGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E705560" ref_strand="+" ref_description="SGN-E705560 [FA27CA05]">
      <seq>cccaattccatccgccatggcaacggcgccagccatttttgtgccttccacttctctcgcttcctccaatgcacgcaagattaatctaagttcatggaacgagaaactggttataccccaaaattttccattctggactcccaagtaccagtctaggaaaccaccgtcatgctccggtaccaatgtcacggtggtccaaggtgatcggaatacaaccgaactaccaatgagtattgacgctcttgacagtttcattcgccttaatttgggaaactggaccggctctttccatcaatttgatggtcatggaaatttgatgcatagaattacaacgaaacttgctgtgggctcttatggtgaaggtgaactgatgagtttattacaaacgttatacatcaaacaacctccatctaccacttcatgttctggcgatgattgtgagtcagagtggtttgagtacaaaatcaaagagaccaacatgtttaccgtcgacaaatatcaacagattggcttcttccccaaggaaaaggcatacgcactaagatatcagactgctggcatgttggagactgtgttaagacagggagtgctaggtgaagatgatatcggagaagaatcaccaagaaatctgaagcttccctctaaacgtccttctattgtatgtgaaaattgtctttattcactggagaaagataggcgagtgagagcatttcatataatggacccaaaaggagtactggaaatgcttcttgttttccttgaaaaaagagggaacggagaggccattcctccctcctttgaccatttcaggaggatactgaaagaattctgcctcctcttgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="59133" stop="62440"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59433" g_stop="59724" g_length="292"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="292" r_length="292" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59725" i_stop="59914" i_length="190">
            <donor d_prob="0.196" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59915" g_stop="60009" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="293" r_stop="387" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="60010" i_stop="60743" i_length="734">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60744" g_stop="60861" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="388" r_stop="505" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="60862" i_stop="60992" i_length="131">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.442" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="60993" g_stop="61111" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="506" r_stop="624" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="61112" i_stop="61789" i_length="678">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.762" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="61790" g_stop="61976" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="625" r_stop="810" r_length="186" r_score="0.984"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="61977" i_stop="62107" i_length="131">
            <donor d_prob="0.869" d_score="0.94"/>
            <acceptor a_prob="0.974" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="62108" g_stop="62140" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="811" r_stop="843" r_length="33" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E705560" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>844</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E705560" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59433" e_stop="59724"/>
          <exon e_start="59915" e_stop="60009"/>
          <exon e_start="60744" e_stop="60861"/>
          <exon e_start="60993" e_stop="61111"/>
          <exon e_start="61790" e_stop="61976"/>
          <exon e_start="62108" e_stop="62140"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCAATTCCATCCGCCATGGCAACGGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCATGTCAGGATCAACTCCGTTCCTCTTTCTCTCTTTCTGTGGATGCATTGTCTTATTTTTGTCTATAACTTTATTATTGATAAATACACGTATATTTATGAATTTTTGATAAATATTCATATCCTATAATTTTTAGTTTGAGGTGGAAACGTGCATGGATTTGATTCCTTCATCTGCTTGATTTATTTTGCAGCAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAACGTGAGCTCCTATAGTTAGATTCTTCCCTGTATTAATAATGTGTCTTAACCTTGCTATGTTTCCGATGAAAAGTAAGTTAAATAGATTAACTGTCCTTAACAATTTTGTAGCTTCTTCGGTGACTAATATGTGTAAAGTATATATGTTAGTTTATACATTCTAACTTTGAGAATGATCCAATCTAATTCTTTTTGTAATTGTGAAATTGCTAGTACTTATGTAATTAGTAATTTAATAAAATTAAAGGTAGTTGTTAGTTATCCGAAGTTAAAAAACTCTTTTGAGATTTAGGAAAAGTTAAATTAGAATTGAGGAGAAAACCATGGAAATTTCAATGTTTACACTTCATTTTACATGGTTATAGTTTAATGGTATGTAGGTGAACTTTAGGGAATACTTGGAAATCCAGGTGATCTCTTTTTCTTGTTTGTGAATTTTGAGAAATTTTCCATTTAGTGGCATGCTATATTTAAGTGCAAGTAGATTTTGTCAGCCCAAAGCTCAAATTCTTCCACTGTTTTAAATAAAGTTGAGTTTGGAGAATTTATTAAGGAGGCCAATGTCACACATGCATTTCTGATTCATAAGCCCCTTTAGTTTGCTTTTTTATCTGCATAGAATTAGTTAGCAGTGGACACCAATGTATAGGGTATTTTCATTAAATTTGGGTACTGTTATATGTGTTCACTTTATGGTCTGGGAAACAAGTCGACTAACCGGCTTCAAAATTGTAGGTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAAATCAAAGAGACCAACATGTTTACCGTCGACAAATATCAACAGGTGAGCTTCACTAAGACAGAGAACTAACTTATATCCCTTCGCTGGTCATACTTAATAAAGACTGTTATCTGCAGTTTCTGTTTCTTTTCAGATTTTATTGCATTTGAGGTACCACTAAAAGTAGTTTGCAGATTGGCTTCTTCCCCAAGGAAAAGGCATACGCACTAAGATATCAGACTGCTGGCATGTTGGAGACTGTGTTAAGACAGGGAGTGCTAGGTGAAGATGATATCGGAGAAGAATCACCAAGGTAAATGTTTCTTACGTGGAGATGAATCAGTCAAAATAAGTTAAAATATTAGATCTGATGAGATCAAAGGTTGAAATTATGCATATGTTTTGCTGCTAGCTTTATTTTGGAAATGCTACCCAGTATGACCTTAATGTTGCTGTTTGTCACTTTTCCCCTTGGCTCTGCTGTGTTCTGGTCTGTGTGCTGTTCTGGTCTGTGTGCTTATCGGTTATGTTTTCAAACATATTCAGTTTTCACCCTGTACTGAAACAAACCAAAAAGGCTAATGCCTAAGAATTTGAGTAAACAAATTCCAAAAGGCAAATAAGACAATCAATATGTAAAGAATCCTCTCATCATAGCAGTAATTAGTTCCCAACTTAAAAGATATCAACTCTGTAAAAGAATCTCACACAATTAAGCATTCATTAGTAGATCTTTCCTACTAACAAATAAATATTGGTGATCTTGGACATCTCATAAGCTTCATCAGATCAATTAACTTGCATATTATTGCTTCTGACTTTCATGTTAGAAATTATAGACAGTCTTTTAATATCCAATTGCAAAGGTTATGTAAATTGCACGGGATCTTTTCTCATGAATGACTGTTCATATTTTTTGATTAGCTTTATCTTTTGGTTCCTGGCTTTGAATTTCTTAGTATCATTCTATAATTCTTCTTTTCTTTCACAGAAATCTGAAGCTTCCCTCTAAACGTCCTTCTATTGTATGTGAAAATTGTCTTTATTCACTGGAGAAAGATAGGCGAGTGAGAGCATTTCATATAATGGACCCAAAAGGAGTACTGGAAATGCTTCTTGTTTTCCTTGAAGAAAGAGGGAACGGAGAGGCCATTCCTCCCTCCTTTGACGATTTCAAGGTAATTTTGACTTGAAAGGGGAAGGGTTGCCCTTCTATTCTTCGTTTGGACTACCTAAACATAGTTTGATTCAACATGTTAGTTACCAGAACCAAATGATTGTTCTTATGCATTCCATGGTCATCTTGTAGGAGGATACTGAAAGAATTCTGCCTCATCTTGGA</genome_strand>
        <mrna_strand>CCCAATTCCATCCGCCATGGCAACGGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCAT..............................................................................................................................................................................................CAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAAATCAAAGAGACCAACATGTTTACCGTCGACAAATATCAACAG...................................................................................................................................ATTGGCTTCTTCCCCAAGGAAAAGGCATACGCACTAAGATATCAGACTGCTGGCATGTTGGAGACTGTGTTAAGACAGGGAGTGCTAGGTGAAGATGATATCGGAGAAGAATCACCAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATCTGAAGCTTCCCTCTAAACGTCCTTCTATTGTATGTGAAAATTGTCTTTATTCACTGGAGAAAGATAGGCGAGTGAGAGCATTTCATATAATGGACCCAAAAGGAGTACTGGAAATGCTTCTTGTTTTCCTTGAAAAAAGAGGGAACGGAGAGGCCATTCCTCCCTCCTTTGACCATTTC-AG...................................................................................................................................GAGGATACTGAAAGAATTCTGCCTCCTCTTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E705342" ref_strand="+" ref_description="SGN-E705342 [FA26DD11]">
      <seq>cccaattccatccgccatggcaacggcgccagccatttttgtgccttccacttctctcgcttcctccaatgcacgcaagattaatctaagttcatggaacgagaaactggttataccccaaaattttccattctggactcccaagtaccagtctaggaaaccaccgtcatgctccggtaccaatgtcacggtggtccaaggtgatcggaatacaaccgaactaccaatgagtattgacgctcttgacagtttcattcgccttaatttgggaaactggaccggctctttccatcaatttgatggtcatggaaatttgatgcatagaattacaacgaaacttgctgtgggctcttatggtgaaggtgaactgatgagtttattacaaacgttatacatcaaacaacctccatctaccacttcatgttctggcgatgattgtgagtcagagtggtttgagtacaaaatcaaagagaccaacatgtttaccgtcgacaaatatcaacagattggcttcttccccaaggaaaaggcatacgcactaagatatcagactgctggcatgttggagactgtgttaagacagggagtgctaggtgaagatgatatcggagaagaatcaccaagaaatctgaagcttccctctaaacgtccttctattgtatgtgaaaattgtctttattcactggagaaagataggcgagtgagagcatttcatataatggacccaaaaggagtactggaaatgcttcttgttttccttgaagaaagagggaacggagaggccattcctccctcctttga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="59133" stop="62266"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59433" g_stop="59724" g_length="292"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="292" r_length="292" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59725" i_stop="59914" i_length="190">
            <donor d_prob="0.196" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59915" g_stop="60009" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="293" r_stop="387" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="60010" i_stop="60743" i_length="734">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60744" g_stop="60861" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="388" r_stop="505" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="60862" i_stop="60992" i_length="131">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.442" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="60993" g_stop="61111" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="506" r_stop="624" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="61112" i_stop="61789" i_length="678">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.762" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="61790" g_stop="61966" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="625" r_stop="801" r_length="177" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E705342" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>801</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E705342" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59433" e_stop="59724"/>
          <exon e_start="59915" e_stop="60009"/>
          <exon e_start="60744" e_stop="60861"/>
          <exon e_start="60993" e_stop="61111"/>
          <exon e_start="61790" e_stop="61966"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCAATTCCATCCGCCATGGCAACGGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCATGTCAGGATCAACTCCGTTCCTCTTTCTCTCTTTCTGTGGATGCATTGTCTTATTTTTGTCTATAACTTTATTATTGATAAATACACGTATATTTATGAATTTTTGATAAATATTCATATCCTATAATTTTTAGTTTGAGGTGGAAACGTGCATGGATTTGATTCCTTCATCTGCTTGATTTATTTTGCAGCAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAACGTGAGCTCCTATAGTTAGATTCTTCCCTGTATTAATAATGTGTCTTAACCTTGCTATGTTTCCGATGAAAAGTAAGTTAAATAGATTAACTGTCCTTAACAATTTTGTAGCTTCTTCGGTGACTAATATGTGTAAAGTATATATGTTAGTTTATACATTCTAACTTTGAGAATGATCCAATCTAATTCTTTTTGTAATTGTGAAATTGCTAGTACTTATGTAATTAGTAATTTAATAAAATTAAAGGTAGTTGTTAGTTATCCGAAGTTAAAAAACTCTTTTGAGATTTAGGAAAAGTTAAATTAGAATTGAGGAGAAAACCATGGAAATTTCAATGTTTACACTTCATTTTACATGGTTATAGTTTAATGGTATGTAGGTGAACTTTAGGGAATACTTGGAAATCCAGGTGATCTCTTTTTCTTGTTTGTGAATTTTGAGAAATTTTCCATTTAGTGGCATGCTATATTTAAGTGCAAGTAGATTTTGTCAGCCCAAAGCTCAAATTCTTCCACTGTTTTAAATAAAGTTGAGTTTGGAGAATTTATTAAGGAGGCCAATGTCACACATGCATTTCTGATTCATAAGCCCCTTTAGTTTGCTTTTTTATCTGCATAGAATTAGTTAGCAGTGGACACCAATGTATAGGGTATTTTCATTAAATTTGGGTACTGTTATATGTGTTCACTTTATGGTCTGGGAAACAAGTCGACTAACCGGCTTCAAAATTGTAGGTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAAATCAAAGAGACCAACATGTTTACCGTCGACAAATATCAACAGGTGAGCTTCACTAAGACAGAGAACTAACTTATATCCCTTCGCTGGTCATACTTAATAAAGACTGTTATCTGCAGTTTCTGTTTCTTTTCAGATTTTATTGCATTTGAGGTACCACTAAAAGTAGTTTGCAGATTGGCTTCTTCCCCAAGGAAAAGGCATACGCACTAAGATATCAGACTGCTGGCATGTTGGAGACTGTGTTAAGACAGGGAGTGCTAGGTGAAGATGATATCGGAGAAGAATCACCAAGGTAAATGTTTCTTACGTGGAGATGAATCAGTCAAAATAAGTTAAAATATTAGATCTGATGAGATCAAAGGTTGAAATTATGCATATGTTTTGCTGCTAGCTTTATTTTGGAAATGCTACCCAGTATGACCTTAATGTTGCTGTTTGTCACTTTTCCCCTTGGCTCTGCTGTGTTCTGGTCTGTGTGCTGTTCTGGTCTGTGTGCTTATCGGTTATGTTTTCAAACATATTCAGTTTTCACCCTGTACTGAAACAAACCAAAAAGGCTAATGCCTAAGAATTTGAGTAAACAAATTCCAAAAGGCAAATAAGACAATCAATATGTAAAGAATCCTCTCATCATAGCAGTAATTAGTTCCCAACTTAAAAGATATCAACTCTGTAAAAGAATCTCACACAATTAAGCATTCATTAGTAGATCTTTCCTACTAACAAATAAATATTGGTGATCTTGGACATCTCATAAGCTTCATCAGATCAATTAACTTGCATATTATTGCTTCTGACTTTCATGTTAGAAATTATAGACAGTCTTTTAATATCCAATTGCAAAGGTTATGTAAATTGCACGGGATCTTTTCTCATGAATGACTGTTCATATTTTTTGATTAGCTTTATCTTTTGGTTCCTGGCTTTGAATTTCTTAGTATCATTCTATAATTCTTCTTTTCTTTCACAGAAATCTGAAGCTTCCCTCTAAACGTCCTTCTATTGTATGTGAAAATTGTCTTTATTCACTGGAGAAAGATAGGCGAGTGAGAGCATTTCATATAATGGACCCAAAAGGAGTACTGGAAATGCTTCTTGTTTTCCTTGAAGAAAGAGGGAACGGAGAGGCCATTCCTCCCTCCTTTGA</genome_strand>
        <mrna_strand>CCCAATTCCATCCGCCATGGCAACGGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCAT..............................................................................................................................................................................................CAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAAATCAAAGAGACCAACATGTTTACCGTCGACAAATATCAACAG...................................................................................................................................ATTGGCTTCTTCCCCAAGGAAAAGGCATACGCACTAAGATATCAGACTGCTGGCATGTTGGAGACTGTGTTAAGACAGGGAGTGCTAGGTGAAGATGATATCGGAGAAGAATCACCAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATCTGAAGCTTCCCTCTAAACGTCCTTCTATTGTATGTGAAAATTGTCTTTATTCACTGGAGAAAGATAGGCGAGTGAGAGCATTTCATATAATGGACCCAAAAGGAGTACTGGAAATGCTTCTTGTTTTCCTTGAAGAAAGAGGGAACGGAGAGGCCATTCCTCCCTCCTTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E346201" ref_strand="+" ref_description="SGN-E346201 [cTOF-23-I3]">
      <seq>ccaattccatccgccatggcaacggcgccagccatttttgtgccttccacttctctcgcttcctccaatgcacgcaagattaatctaagttcatggaacgagaaactggttataccccaaaattttccattctggactcccaagtaccagtctaggaaaccaccgtcatgctccggtaccaatgtcacggtggtccaaggtgatcggaatacaaccgaactaccaatgagtattgacgctcttgacagtttcattcgccttaatttgggaaactggaccggctctttccatcaatttgatggtcatggaaatttgatgcatagaattacaacgaaacttgctgtgggctcttatggtgaaggtgaactgatgagtttattacaaacgttatacatcaaacaacctccatctaccacttcatgttctggcgatgattgtgagtcagagtggtttgagtacaaaatcaaagagaccaacatgtttaccgtcgacaaatatcaacagattggcttcttccccaaggaaaaggcatacgcactaagatatcagactgctggcatgttggagactgtgttaagacagggagtgctaggtgaagatgatatcggagaagaatcaccaagaaatctgaagcttccctctaaacgtccttctattgtatgtgaaaattgtctttattcactggagaaagataggcgagtgagagcatttcatataatggacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="59134" stop="62190"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59434" g_stop="59724" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="291" r_length="291" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59725" i_stop="59914" i_length="190">
            <donor d_prob="0.196" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59915" g_stop="60009" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="292" r_stop="386" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="60010" i_stop="60743" i_length="734">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60744" g_stop="60861" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="387" r_stop="504" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="60862" i_stop="60992" i_length="131">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.442" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="60993" g_stop="61111" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="505" r_stop="623" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="61112" i_stop="61789" i_length="678">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.762" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="61790" g_stop="61890" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="624" r_stop="724" r_length="101" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E346201" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>724</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E346201" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59434" e_stop="59724"/>
          <exon e_start="59915" e_stop="60009"/>
          <exon e_start="60744" e_stop="60861"/>
          <exon e_start="60993" e_stop="61111"/>
          <exon e_start="61790" e_stop="61890"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAATTCCATCCGCCATGGCAACGGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCATGTCAGGATCAACTCCGTTCCTCTTTCTCTCTTTCTGTGGATGCATTGTCTTATTTTTGTCTATAACTTTATTATTGATAAATACACGTATATTTATGAATTTTTGATAAATATTCATATCCTATAATTTTTAGTTTGAGGTGGAAACGTGCATGGATTTGATTCCTTCATCTGCTTGATTTATTTTGCAGCAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAACGTGAGCTCCTATAGTTAGATTCTTCCCTGTATTAATAATGTGTCTTAACCTTGCTATGTTTCCGATGAAAAGTAAGTTAAATAGATTAACTGTCCTTAACAATTTTGTAGCTTCTTCGGTGACTAATATGTGTAAAGTATATATGTTAGTTTATACATTCTAACTTTGAGAATGATCCAATCTAATTCTTTTTGTAATTGTGAAATTGCTAGTACTTATGTAATTAGTAATTTAATAAAATTAAAGGTAGTTGTTAGTTATCCGAAGTTAAAAAACTCTTTTGAGATTTAGGAAAAGTTAAATTAGAATTGAGGAGAAAACCATGGAAATTTCAATGTTTACACTTCATTTTACATGGTTATAGTTTAATGGTATGTAGGTGAACTTTAGGGAATACTTGGAAATCCAGGTGATCTCTTTTTCTTGTTTGTGAATTTTGAGAAATTTTCCATTTAGTGGCATGCTATATTTAAGTGCAAGTAGATTTTGTCAGCCCAAAGCTCAAATTCTTCCACTGTTTTAAATAAAGTTGAGTTTGGAGAATTTATTAAGGAGGCCAATGTCACACATGCATTTCTGATTCATAAGCCCCTTTAGTTTGCTTTTTTATCTGCATAGAATTAGTTAGCAGTGGACACCAATGTATAGGGTATTTTCATTAAATTTGGGTACTGTTATATGTGTTCACTTTATGGTCTGGGAAACAAGTCGACTAACCGGCTTCAAAATTGTAGGTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAAATCAAAGAGACCAACATGTTTACCGTCGACAAATATCAACAGGTGAGCTTCACTAAGACAGAGAACTAACTTATATCCCTTCGCTGGTCATACTTAATAAAGACTGTTATCTGCAGTTTCTGTTTCTTTTCAGATTTTATTGCATTTGAGGTACCACTAAAAGTAGTTTGCAGATTGGCTTCTTCCCCAAGGAAAAGGCATACGCACTAAGATATCAGACTGCTGGCATGTTGGAGACTGTGTTAAGACAGGGAGTGCTAGGTGAAGATGATATCGGAGAAGAATCACCAAGGTAAATGTTTCTTACGTGGAGATGAATCAGTCAAAATAAGTTAAAATATTAGATCTGATGAGATCAAAGGTTGAAATTATGCATATGTTTTGCTGCTAGCTTTATTTTGGAAATGCTACCCAGTATGACCTTAATGTTGCTGTTTGTCACTTTTCCCCTTGGCTCTGCTGTGTTCTGGTCTGTGTGCTGTTCTGGTCTGTGTGCTTATCGGTTATGTTTTCAAACATATTCAGTTTTCACCCTGTACTGAAACAAACCAAAAAGGCTAATGCCTAAGAATTTGAGTAAACAAATTCCAAAAGGCAAATAAGACAATCAATATGTAAAGAATCCTCTCATCATAGCAGTAATTAGTTCCCAACTTAAAAGATATCAACTCTGTAAAAGAATCTCACACAATTAAGCATTCATTAGTAGATCTTTCCTACTAACAAATAAATATTGGTGATCTTGGACATCTCATAAGCTTCATCAGATCAATTAACTTGCATATTATTGCTTCTGACTTTCATGTTAGAAATTATAGACAGTCTTTTAATATCCAATTGCAAAGGTTATGTAAATTGCACGGGATCTTTTCTCATGAATGACTGTTCATATTTTTTGATTAGCTTTATCTTTTGGTTCCTGGCTTTGAATTTCTTAGTATCATTCTATAATTCTTCTTTTCTTTCACAGAAATCTGAAGCTTCCCTCTAAACGTCCTTCTATTGTATGTGAAAATTGTCTTTATTCACTGGAGAAAGATAGGCGAGTGAGAGCATTTCATATAATGGACC</genome_strand>
        <mrna_strand>CCAATTCCATCCGCCATGGCAACGGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCAT..............................................................................................................................................................................................CAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAAATCAAAGAGACCAACATGTTTACCGTCGACAAATATCAACAG...................................................................................................................................ATTGGCTTCTTCCCCAAGGAAAAGGCATACGCACTAAGATATCAGACTGCTGGCATGTTGGAGACTGTGTTAAGACAGGGAGTGCTAGGTGAAGATGATATCGGAGAAGAATCACCAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATCTGAAGCTTCCCTCTAAACGTCCTTCTATTGTATGTGAAAATTGTCTTTATTCACTGGAGAAAGATAGGCGAGTGAGAGCATTTCATATAATGGACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E314943" ref_strand="+" ref_description="SGN-E314943 [cTOA-31-C19]">
      <seq>ccaattccatccgccatggcaacggcgccagccatttttgtgccttccacttctctcgcttcctccaatgcacgcaagattaatctaagttcatggaacgagaaactggttataccccaaaattttccattctggactcccaagtaccagtctaggaaaccaccgtcatgctccggtaccaatgtcacggtggtccaaggtgatcggaatacaaccgaactaccaatgagtattgacgctcttgacagtttcattcgccttaatttgggaaactggaccggctctttccatcaatttgatggtcatggaaatttgatgcatagaattacaacgaaacttgctgtgggctcttatggtgaaggtgaactgatgagtttattacaaacgttatacatcaaacaacctccatctaccacttcatgttctggcgatgattgtgagtcagagtggtttgagtacaaaatcaaagagaccaacatgtttaccgtcgacaaatatcaacagattttattgcatttgaggtaccactaaaagtagtttgcagattggcttcttccccaaggaaaaggcatacgcactaagatatcagactgctggcatgttggagactgtgttaagacagggagtgctaggtgaagatgatatcggagaaaatcaccaagaaatctgaagcttccctctaacgtccttctatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="59134" stop="62123"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59434" g_stop="59724" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="291" r_length="291" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59725" i_stop="59914" i_length="190">
            <donor d_prob="0.196" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59915" g_stop="60009" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="292" r_stop="386" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="60010" i_stop="60743" i_length="734">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60744" g_stop="60861" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="387" r_stop="504" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="60862" i_stop="60952" i_length="91">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.599" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="60953" g_stop="61111" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="505" r_stop="662" r_length="158" r_score="0.994"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="61112" i_stop="61789" i_length="678">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.762" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="61790" g_stop="61823" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="663" r_stop="695" r_length="33" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E314943" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>697</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E314943" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59434" e_stop="59724"/>
          <exon e_start="59915" e_stop="60009"/>
          <exon e_start="60744" e_stop="60861"/>
          <exon e_start="60953" e_stop="61111"/>
          <exon e_start="61790" e_stop="61823"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAATTCCATCCGCCATGGCAACGGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCATGTCAGGATCAACTCCGTTCCTCTTTCTCTCTTTCTGTGGATGCATTGTCTTATTTTTGTCTATAACTTTATTATTGATAAATACACGTATATTTATGAATTTTTGATAAATATTCATATCCTATAATTTTTAGTTTGAGGTGGAAACGTGCATGGATTTGATTCCTTCATCTGCTTGATTTATTTTGCAGCAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAACGTGAGCTCCTATAGTTAGATTCTTCCCTGTATTAATAATGTGTCTTAACCTTGCTATGTTTCCGATGAAAAGTAAGTTAAATAGATTAACTGTCCTTAACAATTTTGTAGCTTCTTCGGTGACTAATATGTGTAAAGTATATATGTTAGTTTATACATTCTAACTTTGAGAATGATCCAATCTAATTCTTTTTGTAATTGTGAAATTGCTAGTACTTATGTAATTAGTAATTTAATAAAATTAAAGGTAGTTGTTAGTTATCCGAAGTTAAAAAACTCTTTTGAGATTTAGGAAAAGTTAAATTAGAATTGAGGAGAAAACCATGGAAATTTCAATGTTTACACTTCATTTTACATGGTTATAGTTTAATGGTATGTAGGTGAACTTTAGGGAATACTTGGAAATCCAGGTGATCTCTTTTTCTTGTTTGTGAATTTTGAGAAATTTTCCATTTAGTGGCATGCTATATTTAAGTGCAAGTAGATTTTGTCAGCCCAAAGCTCAAATTCTTCCACTGTTTTAAATAAAGTTGAGTTTGGAGAATTTATTAAGGAGGCCAATGTCACACATGCATTTCTGATTCATAAGCCCCTTTAGTTTGCTTTTTTATCTGCATAGAATTAGTTAGCAGTGGACACCAATGTATAGGGTATTTTCATTAAATTTGGGTACTGTTATATGTGTTCACTTTATGGTCTGGGAAACAAGTCGACTAACCGGCTTCAAAATTGTAGGTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAAATCAAAGAGACCAACATGTTTACCGTCGACAAATATCAACAGGTGAGCTTCACTAAGACAGAGAACTAACTTATATCCCTTCGCTGGTCATACTTAATAAAGACTGTTATCTGCAGTTTCTGTTTCTTTTCAGATTTTATTGCATTTGAGGTACCACTAAAAGTAGTTTGCAGATTGGCTTCTTCCCCAAGGAAAAGGCATACGCACTAAGATATCAGACTGCTGGCATGTTGGAGACTGTGTTAAGACAGGGAGTGCTAGGTGAAGATGATATCGGAGAAGAATCACCAAGGTAAATGTTTCTTACGTGGAGATGAATCAGTCAAAATAAGTTAAAATATTAGATCTGATGAGATCAAAGGTTGAAATTATGCATATGTTTTGCTGCTAGCTTTATTTTGGAAATGCTACCCAGTATGACCTTAATGTTGCTGTTTGTCACTTTTCCCCTTGGCTCTGCTGTGTTCTGGTCTGTGTGCTGTTCTGGTCTGTGTGCTTATCGGTTATGTTTTCAAACATATTCAGTTTTCACCCTGTACTGAAACAAACCAAAAAGGCTAATGCCTAAGAATTTGAGTAAACAAATTCCAAAAGGCAAATAAGACAATCAATATGTAAAGAATCCTCTCATCATAGCAGTAATTAGTTCCCAACTTAAAAGATATCAACTCTGTAAAAGAATCTCACACAATTAAGCATTCATTAGTAGATCTTTCCTACTAACAAATAAATATTGGTGATCTTGGACATCTCATAAGCTTCATCAGATCAATTAACTTGCATATTATTGCTTCTGACTTTCATGTTAGAAATTATAGACAGTCTTTTAATATCCAATTGCAAAGGTTATGTAAATTGCACGGGATCTTTTCTCATGAATGACTGTTCATATTTTTTGATTAGCTTTATCTTTTGGTTCCTGGCTTTGAATTTCTTAGTATCATTCTATAATTCTTCTTTTCTTTCACAGAAATCTGAAGCTTCCCTCTAAACGTCCTTCTATT</genome_strand>
        <mrna_strand>CCAATTCCATCCGCCATGGCAACGGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCAT..............................................................................................................................................................................................CAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAAATCAAAGAGACCAACATGTTTACCGTCGACAAATATCAACAG...........................................................................................ATTTTATTGCATTTGAGGTACCACTAAAAGTAGTTTGCAGATTGGCTTCTTCCCCAAGGAAAAGGCATACGCACTAAGATATCAGACTGCTGGCATGTTGGAGACTGTGTTAAGACAGGGAGTGCTAGGTGAAGATGATATCGGAGAA-AATCACCAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATCTGAAGCTTCCCTCT-AACGTCCTTCTATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E346888" ref_strand="+" ref_description="SGN-E346888 [cTOF-32-M2]">
      <seq>ccaattccatccgccatggcaacggcgccagccatttttgtgccttccacttctctcgcttcctccaatgcacgcaagattaatctaagttcatggaacgagaaactggttataccccaaaattttccattctggactcccaagtaccagtctaggaaaccaccgtcatgctccggtaccaatgtcacggtggtccaaggtgatcggaatacaaccgaactaccaatgagtattgacgctcttgacagtttcattcgccttaatttgggaaactggaccggctctttccatcaatttgatggtcatggaaatttgatgcatagaattacaacgaaacttgctgtgggctcttatggtgaaggtgaactgatgagtttattacaaacgttatacatcaaacaacctccatctaccacttcatgttctggcgatgattgtgagtcagagtggtttgagtacaaaatcaaagagaccaacatgtttaccgtcgacaaatatcaacagattggcttcttccccaaggaaaaggcatacgcactaagatatcagactgctggcatgttggagactgtgttaagacagggagtgctaggt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="59134" stop="61382"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59434" g_stop="59724" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="291" r_length="291" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59725" i_stop="59914" i_length="190">
            <donor d_prob="0.196" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59915" g_stop="60009" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="292" r_stop="386" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="60010" i_stop="60743" i_length="734">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60744" g_stop="60861" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="387" r_stop="504" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="60862" i_stop="60992" i_length="131">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.442" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="60993" g_stop="61082" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="505" r_stop="594" r_length="90" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E346888" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>594</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E346888" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59434" e_stop="59724"/>
          <exon e_start="59915" e_stop="60009"/>
          <exon e_start="60744" e_stop="60861"/>
          <exon e_start="60993" e_stop="61082"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAATTCCATCCGCCATGGCAACGGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCATGTCAGGATCAACTCCGTTCCTCTTTCTCTCTTTCTGTGGATGCATTGTCTTATTTTTGTCTATAACTTTATTATTGATAAATACACGTATATTTATGAATTTTTGATAAATATTCATATCCTATAATTTTTAGTTTGAGGTGGAAACGTGCATGGATTTGATTCCTTCATCTGCTTGATTTATTTTGCAGCAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAACGTGAGCTCCTATAGTTAGATTCTTCCCTGTATTAATAATGTGTCTTAACCTTGCTATGTTTCCGATGAAAAGTAAGTTAAATAGATTAACTGTCCTTAACAATTTTGTAGCTTCTTCGGTGACTAATATGTGTAAAGTATATATGTTAGTTTATACATTCTAACTTTGAGAATGATCCAATCTAATTCTTTTTGTAATTGTGAAATTGCTAGTACTTATGTAATTAGTAATTTAATAAAATTAAAGGTAGTTGTTAGTTATCCGAAGTTAAAAAACTCTTTTGAGATTTAGGAAAAGTTAAATTAGAATTGAGGAGAAAACCATGGAAATTTCAATGTTTACACTTCATTTTACATGGTTATAGTTTAATGGTATGTAGGTGAACTTTAGGGAATACTTGGAAATCCAGGTGATCTCTTTTTCTTGTTTGTGAATTTTGAGAAATTTTCCATTTAGTGGCATGCTATATTTAAGTGCAAGTAGATTTTGTCAGCCCAAAGCTCAAATTCTTCCACTGTTTTAAATAAAGTTGAGTTTGGAGAATTTATTAAGGAGGCCAATGTCACACATGCATTTCTGATTCATAAGCCCCTTTAGTTTGCTTTTTTATCTGCATAGAATTAGTTAGCAGTGGACACCAATGTATAGGGTATTTTCATTAAATTTGGGTACTGTTATATGTGTTCACTTTATGGTCTGGGAAACAAGTCGACTAACCGGCTTCAAAATTGTAGGTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAAATCAAAGAGACCAACATGTTTACCGTCGACAAATATCAACAGGTGAGCTTCACTAAGACAGAGAACTAACTTATATCCCTTCGCTGGTCATACTTAATAAAGACTGTTATCTGCAGTTTCTGTTTCTTTTCAGATTTTATTGCATTTGAGGTACCACTAAAAGTAGTTTGCAGATTGGCTTCTTCCCCAAGGAAAAGGCATACGCACTAAGATATCAGACTGCTGGCATGTTGGAGACTGTGTTAAGACAGGGAGTGCTAGGT</genome_strand>
        <mrna_strand>CCAATTCCATCCGCCATGGCAACGGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCAT..............................................................................................................................................................................................CAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAAATCAAAGAGACCAACATGTTTACCGTCGACAAATATCAACAG...................................................................................................................................ATTGGCTTCTTCCCCAAGGAAAAGGCATACGCACTAAGATATCAGACTGCTGGCATGTTGGAGACTGTGTTAAGACAGGGAGTGCTAGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E248610" ref_strand="+" ref_description="SGN-E248610 [cLEF-58-K5]">
      <seq>ccaattccatccgccatggcaacggcgccagccatttttgtgccttccacttctctcgcttcctccaatgcacgcaagattaatctaagttcatggaacgagaaactggttataccccaaaattttccattctggactcccaagtaccagtctaggaaaccaccgtcatgctccggtaccaatgtcacggtggtccaaggtgatcggaatacaaccgaactaccaatgagtattgacgctcttgacagtttcattcgccttaatttgggaaactggaccggctctttccatcaatttgatggtcatggaaatttgatgcatagaattacaacgaaacttgctgtgggctcttatggtgaaggtgaactgatgagtttattacaaacgttatacatcaaacaacctccatctaccacttcatgttctggcgatgattgtgagtcagagtggtttgagtacaaaatcaaagagaccaacatgtttaccgtcgacaaatatcaacagattggcttcttccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="59134" stop="61170"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59434" g_stop="59724" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="291" r_length="291" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59725" i_stop="59914" i_length="190">
            <donor d_prob="0.196" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59915" g_stop="60009" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="292" r_stop="386" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="60010" i_stop="60743" i_length="734">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60744" g_stop="60861" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="387" r_stop="504" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="60862" i_stop="60992" i_length="131">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.442" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="60993" g_stop="61006" g_length="14"/>
          <reference_exon_boundary r_type="cDNA" r_start="505" r_stop="518" r_length="14" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E248610" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>518</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E248610" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59434" e_stop="59724"/>
          <exon e_start="59915" e_stop="60009"/>
          <exon e_start="60744" e_stop="60861"/>
          <exon e_start="60993" e_stop="61006"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAATTCCATCCGCCATGGCAACGGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCATGTCAGGATCAACTCCGTTCCTCTTTCTCTCTTTCTGTGGATGCATTGTCTTATTTTTGTCTATAACTTTATTATTGATAAATACACGTATATTTATGAATTTTTGATAAATATTCATATCCTATAATTTTTAGTTTGAGGTGGAAACGTGCATGGATTTGATTCCTTCATCTGCTTGATTTATTTTGCAGCAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAACGTGAGCTCCTATAGTTAGATTCTTCCCTGTATTAATAATGTGTCTTAACCTTGCTATGTTTCCGATGAAAAGTAAGTTAAATAGATTAACTGTCCTTAACAATTTTGTAGCTTCTTCGGTGACTAATATGTGTAAAGTATATATGTTAGTTTATACATTCTAACTTTGAGAATGATCCAATCTAATTCTTTTTGTAATTGTGAAATTGCTAGTACTTATGTAATTAGTAATTTAATAAAATTAAAGGTAGTTGTTAGTTATCCGAAGTTAAAAAACTCTTTTGAGATTTAGGAAAAGTTAAATTAGAATTGAGGAGAAAACCATGGAAATTTCAATGTTTACACTTCATTTTACATGGTTATAGTTTAATGGTATGTAGGTGAACTTTAGGGAATACTTGGAAATCCAGGTGATCTCTTTTTCTTGTTTGTGAATTTTGAGAAATTTTCCATTTAGTGGCATGCTATATTTAAGTGCAAGTAGATTTTGTCAGCCCAAAGCTCAAATTCTTCCACTGTTTTAAATAAAGTTGAGTTTGGAGAATTTATTAAGGAGGCCAATGTCACACATGCATTTCTGATTCATAAGCCCCTTTAGTTTGCTTTTTTATCTGCATAGAATTAGTTAGCAGTGGACACCAATGTATAGGGTATTTTCATTAAATTTGGGTACTGTTATATGTGTTCACTTTATGGTCTGGGAAACAAGTCGACTAACCGGCTTCAAAATTGTAGGTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAAATCAAAGAGACCAACATGTTTACCGTCGACAAATATCAACAGGTGAGCTTCACTAAGACAGAGAACTAACTTATATCCCTTCGCTGGTCATACTTAATAAAGACTGTTATCTGCAGTTTCTGTTTCTTTTCAGATTTTATTGCATTTGAGGTACCACTAAAAGTAGTTTGCAGATTGGCTTCTTCCC</genome_strand>
        <mrna_strand>CCAATTCCATCCGCCATGGCAACGGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCAT..............................................................................................................................................................................................CAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAAATCAAAGAGACCAACATGTTTACCGTCGACAAATATCAACAG...................................................................................................................................ATTGGCTTCTTCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E380004" ref_strand="+" ref_description="SGN-E380004 [TUS-3-B10]">
      <seq>ccaattccatccgccatggcaacggcgccagccatttttgtgccttccacttctctcgcttcctccaatgcacgcaagattaatctaagttcatggaacgagaaactggttataccccaaaattttccattctggactcccaagtaccagtctaggaaaccaccgtcatgctccggtaccaatgtcacggtggtccaaggtgatcggaatacaaccgaactaccaatgagtattgacgctcttgacagtttcattcgccttaatttgggaaactggaccggctctttccatgtcaggatcaactccgttcctctttctctctttctgtggatgcattgtcttatttttgtctataactttattattgataaatacacgtatatttatgaatttttgataaatattcatatcctataatttttagtttgaggtggaaacgtgcatggatttgattccttcatctgcttgatttattttgcagcaatttgatggtcatggaaatttgatgcatagaattacaacgaaacttgctgtgggctcttatggtgaaggtgaactgatgagtttattacaaacgttatacatcaaacaacctccatctaccacttcatgttctggcgatgattgtgagtcagagtggtttgagtacaaaatcaaagagaccaacatgtttaccgtcgacaatatcaacagtttctgtttcttttcagattttattgcattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="59134" stop="61266"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59434" g_stop="60009" g_length="576"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="576" r_length="576" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="60010" i_stop="60743" i_length="734">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="60744" g_stop="60861" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="577" r_stop="693" r_length="117" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="60862" i_stop="60935" i_length="74">
            <donor d_prob="0.994" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60936" g_stop="60966" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="694" r_stop="724" r_length="31" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E380004" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>725</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E380004" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59434" e_stop="60009"/>
          <exon e_start="60744" e_stop="60861"/>
          <exon e_start="60936" e_stop="60966"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAATTCCATCCGCCATGGCAACGGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCATGTCAGGATCAACTCCGTTCCTCTTTCTCTCTTTCTGTGGATGCATTGTCTTATTTTTGTCTATAACTTTATTATTGATAAATACACGTATATTTATGAATTTTTGATAAATATTCATATCCTATAATTTTTAGTTTGAGGTGGAAACGTGCATGGATTTGATTCCTTCATCTGCTTGATTTATTTTGCAGCAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAACGTGAGCTCCTATAGTTAGATTCTTCCCTGTATTAATAATGTGTCTTAACCTTGCTATGTTTCCGATGAAAAGTAAGTTAAATAGATTAACTGTCCTTAACAATTTTGTAGCTTCTTCGGTGACTAATATGTGTAAAGTATATATGTTAGTTTATACATTCTAACTTTGAGAATGATCCAATCTAATTCTTTTTGTAATTGTGAAATTGCTAGTACTTATGTAATTAGTAATTTAATAAAATTAAAGGTAGTTGTTAGTTATCCGAAGTTAAAAAACTCTTTTGAGATTTAGGAAAAGTTAAATTAGAATTGAGGAGAAAACCATGGAAATTTCAATGTTTACACTTCATTTTACATGGTTATAGTTTAATGGTATGTAGGTGAACTTTAGGGAATACTTGGAAATCCAGGTGATCTCTTTTTCTTGTTTGTGAATTTTGAGAAATTTTCCATTTAGTGGCATGCTATATTTAAGTGCAAGTAGATTTTGTCAGCCCAAAGCTCAAATTCTTCCACTGTTTTAAATAAAGTTGAGTTTGGAGAATTTATTAAGGAGGCCAATGTCACACATGCATTTCTGATTCATAAGCCCCTTTAGTTTGCTTTTTTATCTGCATAGAATTAGTTAGCAGTGGACACCAATGTATAGGGTATTTTCATTAAATTTGGGTACTGTTATATGTGTTCACTTTATGGTCTGGGAAACAAGTCGACTAACCGGCTTCAAAATTGTAGGTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAAATCAAAGAGACCAACATGTTTACCGTCGACAAATATCAACAGGTGAGCTTCACTAAGACAGAGAACTAACTTATATCCCTTCGCTGGTCATACTTAATAAAGACTGTTATCTGCAGTTTCTGTTTCTTTTCAGATTTTATTGCATTT</genome_strand>
        <mrna_strand>CCAATTCCATCCGCCATGGCAACGGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCATGTCAGGATCAACTCCGTTCCTCTTTCTCTCTTTCTGTGGATGCATTGTCTTATTTTTGTCTATAACTTTATTATTGATAAATACACGTATATTTATGAATTTTTGATAAATATTCATATCCTATAATTTTTAGTTTGAGGTGGAAACGTGCATGGATTTGATTCCTTCATCTGCTTGATTTATTTTGCAGCAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAAATCAAAGAGACCAACATGTTTACCGTCGAC-AATATCAACAG..........................................................................TTTCTGTTTCTTTTCAGATTTTATTGCATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E213751" ref_strand="+" ref_description="SGN-E213751 [cLEC-76-C1]">
      <seq>ccaattccatccgccatggcaacggcgccagccatttttgtgccttccacttctctcgcttcctccaatgcacgcaagattaatctaagttcatggaacgagaaactggttataccccaaaattttccattctggactcccaagtaccagtctaggaaaccaccgtcatgctccggtaccaatgtcacggtggtccaaggtgatcggaatacaaccgaactaccaatgagtattgacgctcttgacagtttcattcgccttaatttgggaaactggaccggctctttccatgtcaggatcaactccgttcctctttctctctttctgtggatgcattgtcttatttttgtctataactttattattgataaatacacgtatatttatgaatttttgataaatattcatatcctataatttttagtttgaggtggaaacgtgcatggatttgattccttcatctgcttgatttattttgcagcaatttgatggtcatggaaatttgatgcatagaattacaacgaaacttgctgtgggctcttatggtgaaggtgaactgatgagtttattacaaacgttatacatcaaacaaccctcatctaccacttcatgttctggcgatgattgtgagtcagagtggtttgagtacaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="59134" stop="61119"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59434" g_stop="60009" g_length="576"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="576" r_length="576" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="60010" i_stop="60743" i_length="734">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="60744" g_stop="60819" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="577" r_stop="652" r_length="76" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E213751" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>652</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E213751" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59434" e_stop="60009"/>
          <exon e_start="60744" e_stop="60819"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAATTCCATCCGCCATGGCAACGGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCATGTCAGGATCAACTCCGTTCCTCTTTCTCTCTTTCTGTGGATGCATTGTCTTATTTTTGTCTATAACTTTATTATTGATAAATACACGTATATTTATGAATTTTTGATAAATATTCATATCCTATAATTTTTAGTTTGAGGTGGAAACGTGCATGGATTTGATTCCTTCATCTGCTTGATTTATTTTGCAGCAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAACGTGAGCTCCTATAGTTAGATTCTTCCCTGTATTAATAATGTGTCTTAACCTTGCTATGTTTCCGATGAAAAGTAAGTTAAATAGATTAACTGTCCTTAACAATTTTGTAGCTTCTTCGGTGACTAATATGTGTAAAGTATATATGTTAGTTTATACATTCTAACTTTGAGAATGATCCAATCTAATTCTTTTTGTAATTGTGAAATTGCTAGTACTTATGTAATTAGTAATTTAATAAAATTAAAGGTAGTTGTTAGTTATCCGAAGTTAAAAAACTCTTTTGAGATTTAGGAAAAGTTAAATTAGAATTGAGGAGAAAACCATGGAAATTTCAATGTTTACACTTCATTTTACATGGTTATAGTTTAATGGTATGTAGGTGAACTTTAGGGAATACTTGGAAATCCAGGTGATCTCTTTTTCTTGTTTGTGAATTTTGAGAAATTTTCCATTTAGTGGCATGCTATATTTAAGTGCAAGTAGATTTTGTCAGCCCAAAGCTCAAATTCTTCCACTGTTTTAAATAAAGTTGAGTTTGGAGAATTTATTAAGGAGGCCAATGTCACACATGCATTTCTGATTCATAAGCCCCTTTAGTTTGCTTTTTTATCTGCATAGAATTAGTTAGCAGTGGACACCAATGTATAGGGTATTTTCATTAAATTTGGGTACTGTTATATGTGTTCACTTTATGGTCTGGGAAACAAGTCGACTAACCGGCTTCAAAATTGTAGGTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAA</genome_strand>
        <mrna_strand>CCAATTCCATCCGCCATGGCAACGGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCATGTCAGGATCAACTCCGTTCCTCTTTCTCTCTTTCTGTGGATGCATTGTCTTATTTTTGTCTATAACTTTATTATTGATAAATACACGTATATTTATGAATTTTTGATAAATATTCATATCCTATAATTTTTAGTTTGAGGTGGAAACGTGCATGGATTTGATTCCTTCATCTGCTTGATTTATTTTGCAGCAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATACATCAAACAACCCTCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E367556" ref_strand="+" ref_description="SGN-E367556 [cLPT-7-N13]">
      <seq>ccaattccatccgccatggcaacggctatgtcagccatttttgtgccttccacttctctcgcttcctccaatgcacgcaagattaatctaagttcatggaacgagaaactggttataccccaaaattttccattctggactcccaagtaccagtctaggaaaccaccgtcatgctccggtaccaatgtcacggtggtccaagggatcggaatacaaccgaactaccaatgagtgttgaagctcttgacagtttcattcgccttaatttgggaaactggaccggctctttccatcaatttgatggtcatggaaatttgatgcatagaattacaacgaaacttgctgtgggctcttatggtgaaggtgaactgatgagtttattacaaacgttatacatcaaacaacctccatctaccacttcatgttctggcgatgattgtgagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="59134" stop="61099"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59434" g_stop="59724" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="293" r_length="293" r_score="0.966"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59725" i_stop="59914" i_length="190">
            <donor d_prob="0.196" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59915" g_stop="60009" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="294" r_stop="388" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="60010" i_stop="60743" i_length="734">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60744" g_stop="60799" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="389" r_stop="444" r_length="56" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E367556" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>442</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E367556" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59434" e_stop="59724"/>
          <exon e_start="59915" e_stop="60009"/>
          <exon e_start="60744" e_stop="60799"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAATTCCATCCGCCATGGCAACGGC---GCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCATGTCAGGATCAACTCCGTTCCTCTTTCTCTCTTTCTGTGGATGCATTGTCTTATTTTTGTCTATAACTTTATTATTGATAAATACACGTATATTTATGAATTTTTGATAAATATTCATATCCTATAATTTTTAGTTTGAGGTGGAAACGTGCATGGATTTGATTCCTTCATCTGCTTGATTTATTTTGCAGCAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAACGTGAGCTCCTATAGTTAGATTCTTCCCTGTATTAATAATGTGTCTTAACCTTGCTATGTTTCCGATGAAAAGTAAGTTAAATAGATTAACTGTCCTTAACAATTTTGTAGCTTCTTCGGTGACTAATATGTGTAAAGTATATATGTTAGTTTATACATTCTAACTTTGAGAATGATCCAATCTAATTCTTTTTGTAATTGTGAAATTGCTAGTACTTATGTAATTAGTAATTTAATAAAATTAAAGGTAGTTGTTAGTTATCCGAAGTTAAAAAACTCTTTTGAGATTTAGGAAAAGTTAAATTAGAATTGAGGAGAAAACCATGGAAATTTCAATGTTTACACTTCATTTTACATGGTTATAGTTTAATGGTATGTAGGTGAACTTTAGGGAATACTTGGAAATCCAGGTGATCTCTTTTTCTTGTTTGTGAATTTTGAGAAATTTTCCATTTAGTGGCATGCTATATTTAAGTGCAAGTAGATTTTGTCAGCCCAAAGCTCAAATTCTTCCACTGTTTTAAATAAAGTTGAGTTTGGAGAATTTATTAAGGAGGCCAATGTCACACATGCATTTCTGATTCATAAGCCCCTTTAGTTTGCTTTTTTATCTGCATAGAATTAGTTAGCAGTGGACACCAATGTATAGGGTATTTTCATTAAATTTGGGTACTGTTATATGTGTTCACTTTATGGTCTGGGAAACAAGTCGACTAACCGGCTTCAAAATTGTAGGTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGT</genome_strand>
        <mrna_strand>CCAATTCCATCCGCCATGGCAACGGCTATGTCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGG-GATCGGAATACAACCGAACTACCAATGAGTGTTGAAGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCAT..............................................................................................................................................................................................CAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E210154" ref_strand="+" ref_description="SGN-E210154 [cLEC-40-H16]">
      <seq>ccaattccatccgccatggcaacggcgccagccatttttgtgccttccacttctctcgcttcctccaatgcacgcaagattaatctaagttcatggaacgagaaactggttataccccaaaattttccattctggactcccaagtaccagtctaggaaaccaccgtcatgctccggtaccaatgtcacggtggtccaaggtgatcggaatacaaccgaactaccaatgagtattgacgctcttgacagtttcattcgccttaatttgggaaactggaccggctctttccatgtcaggatcaactccgttcctctttctctctttctgtggatgcattgtcttatttttgtctataactttattattgataaatacacgtatatttatgaatttttgataaatattcatatcctataatttttagtttgaggtggaaacgtgcatggatttgattccttcatctgcttgatttattttgcagcaatttgatggtcatggaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="59134" stop="60234"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59434" g_stop="59934" g_length="501"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="501" r_length="501" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E210154" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>501</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E210154" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59434" e_stop="59934"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAATTCCATCCGCCATGGCAACGGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCATGTCAGGATCAACTCCGTTCCTCTTTCTCTCTTTCTGTGGATGCATTGTCTTATTTTTGTCTATAACTTTATTATTGATAAATACACGTATATTTATGAATTTTTGATAAATATTCATATCCTATAATTTTTAGTTTGAGGTGGAAACGTGCATGGATTTGATTCCTTCATCTGCTTGATTTATTTTGCAGCAATTTGATGGTCATGGAAA</genome_strand>
        <mrna_strand>CCAATTCCATCCGCCATGGCAACGGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCATGTCAGGATCAACTCCGTTCCTCTTTCTCTCTTTCTGTGGATGCATTGTCTTATTTTTGTCTATAACTTTATTATTGATAAATACACGTATATTTATGAATTTTTGATAAATATTCATATCCTATAATTTTTAGTTTGAGGTGGAAACGTGCATGGATTTGATTCCTTCATCTGCTTGATTTATTTTGCAGCAATTTGATGGTCATGGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E209113" ref_strand="+" ref_description="SGN-E209113 [cLEC-38-K23]">
      <seq>aattccatccgccatggcaacggcgccagccatttttgtgccttccacttctctcgcttcctccaatgcacgcaagattaatctaagttcatggaacgagaaactggttataccccaaaattttccattctggactcccaagtaccagtctaggaaaccaccgtcatgctccggtaccaatgtcacggtggtccaaggtgatcggaatacaaccgaactaccaatgagtattgacgctcttgacagtttcattcgccttaatttgggaaactggaccggctctttccatcaatttgatggtcatggaaatttgatgcatagaattacaacgaaacttgctgtgggctcttatggtgaaggtgaactgatgagtttattacaaacgttatacatcaaacaacctccatctaccacttcatgttctggcgatgattgtgagtcagagtggtttgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="59136" stop="61113"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59436" g_stop="59724" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="289" r_length="289" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59725" i_stop="59914" i_length="190">
            <donor d_prob="0.196" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59915" g_stop="60009" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="290" r_stop="384" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="60010" i_stop="60743" i_length="734">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60744" g_stop="60813" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="385" r_stop="454" r_length="70" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E209113" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>454</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E209113" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59436" e_stop="59724"/>
          <exon e_start="59915" e_stop="60009"/>
          <exon e_start="60744" e_stop="60813"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTCCATCCGCCATGGCAACGGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCATGTCAGGATCAACTCCGTTCCTCTTTCTCTCTTTCTGTGGATGCATTGTCTTATTTTTGTCTATAACTTTATTATTGATAAATACACGTATATTTATGAATTTTTGATAAATATTCATATCCTATAATTTTTAGTTTGAGGTGGAAACGTGCATGGATTTGATTCCTTCATCTGCTTGATTTATTTTGCAGCAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAACGTGAGCTCCTATAGTTAGATTCTTCCCTGTATTAATAATGTGTCTTAACCTTGCTATGTTTCCGATGAAAAGTAAGTTAAATAGATTAACTGTCCTTAACAATTTTGTAGCTTCTTCGGTGACTAATATGTGTAAAGTATATATGTTAGTTTATACATTCTAACTTTGAGAATGATCCAATCTAATTCTTTTTGTAATTGTGAAATTGCTAGTACTTATGTAATTAGTAATTTAATAAAATTAAAGGTAGTTGTTAGTTATCCGAAGTTAAAAAACTCTTTTGAGATTTAGGAAAAGTTAAATTAGAATTGAGGAGAAAACCATGGAAATTTCAATGTTTACACTTCATTTTACATGGTTATAGTTTAATGGTATGTAGGTGAACTTTAGGGAATACTTGGAAATCCAGGTGATCTCTTTTTCTTGTTTGTGAATTTTGAGAAATTTTCCATTTAGTGGCATGCTATATTTAAGTGCAAGTAGATTTTGTCAGCCCAAAGCTCAAATTCTTCCACTGTTTTAAATAAAGTTGAGTTTGGAGAATTTATTAAGGAGGCCAATGTCACACATGCATTTCTGATTCATAAGCCCCTTTAGTTTGCTTTTTTATCTGCATAGAATTAGTTAGCAGTGGACACCAATGTATAGGGTATTTTCATTAAATTTGGGTACTGTTATATGTGTTCACTTTATGGTCTGGGAAACAAGTCGACTAACCGGCTTCAAAATTGTAGGTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAG</genome_strand>
        <mrna_strand>AATTCCATCCGCCATGGCAACGGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCAT..............................................................................................................................................................................................CAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E286716" ref_strand="+" ref_description="SGN-E286716 [cLES-14-F23]">
      <seq>ttccatccgccatggcaacggcgccagccatttttgtgccttccacttctctcgcttcctccaatgcacgcaagattaatctaagttcatggaacgagaaactggttataccccaaaattttccattctggactcccaagtaccagtctaggaaaccaccgtcatgctccggtaccaatgtcacggtggtccaaggtgatcggaatacaaccgaactaccaatgagtattgacgctcttgacagtttcattcgccttaatttgggaaactggaccggctctttccatcaatttgatggtcatggaaatttgatgcatagaattacaacgaaacttgctgtgggctcttatggtgaaggtgaactgatgagtttattacaaacgttatacatcaaacaacctccatctaccacttcatgttctggcgatgattgtgagtcagagtggtttgagtacaaaatcaaagagaccaacatgtttaccgtcgacaaatatcaacaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="59138" stop="61161"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59438" g_stop="59724" g_length="287"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="287" r_length="287" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59725" i_stop="59914" i_length="190">
            <donor d_prob="0.196" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59915" g_stop="60009" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="288" r_stop="382" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="60010" i_stop="60743" i_length="734">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60744" g_stop="60861" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="383" r_stop="500" r_length="118" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E286716" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>500</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E286716" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59438" e_stop="59724"/>
          <exon e_start="59915" e_stop="60009"/>
          <exon e_start="60744" e_stop="60861"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCCATCCGCCATGGCAACGGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCATGTCAGGATCAACTCCGTTCCTCTTTCTCTCTTTCTGTGGATGCATTGTCTTATTTTTGTCTATAACTTTATTATTGATAAATACACGTATATTTATGAATTTTTGATAAATATTCATATCCTATAATTTTTAGTTTGAGGTGGAAACGTGCATGGATTTGATTCCTTCATCTGCTTGATTTATTTTGCAGCAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAACGTGAGCTCCTATAGTTAGATTCTTCCCTGTATTAATAATGTGTCTTAACCTTGCTATGTTTCCGATGAAAAGTAAGTTAAATAGATTAACTGTCCTTAACAATTTTGTAGCTTCTTCGGTGACTAATATGTGTAAAGTATATATGTTAGTTTATACATTCTAACTTTGAGAATGATCCAATCTAATTCTTTTTGTAATTGTGAAATTGCTAGTACTTATGTAATTAGTAATTTAATAAAATTAAAGGTAGTTGTTAGTTATCCGAAGTTAAAAAACTCTTTTGAGATTTAGGAAAAGTTAAATTAGAATTGAGGAGAAAACCATGGAAATTTCAATGTTTACACTTCATTTTACATGGTTATAGTTTAATGGTATGTAGGTGAACTTTAGGGAATACTTGGAAATCCAGGTGATCTCTTTTTCTTGTTTGTGAATTTTGAGAAATTTTCCATTTAGTGGCATGCTATATTTAAGTGCAAGTAGATTTTGTCAGCCCAAAGCTCAAATTCTTCCACTGTTTTAAATAAAGTTGAGTTTGGAGAATTTATTAAGGAGGCCAATGTCACACATGCATTTCTGATTCATAAGCCCCTTTAGTTTGCTTTTTTATCTGCATAGAATTAGTTAGCAGTGGACACCAATGTATAGGGTATTTTCATTAAATTTGGGTACTGTTATATGTGTTCACTTTATGGTCTGGGAAACAAGTCGACTAACCGGCTTCAAAATTGTAGGTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAAATCAAAGAGACCAACATGTTTACCGTCGACAAATATCAACAG</genome_strand>
        <mrna_strand>TTCCATCCGCCATGGCAACGGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCAT..............................................................................................................................................................................................CAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAAATCAAAGAGACCAACATGTTTACCGTCGACAAATATCAACAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E331630" ref_strand="+" ref_description="SGN-E331630 [cTOD-7-K3]">
      <seq>ttccatccgccatggcaacggcgccagccatttttgtgccttccacttctctcgcttcctccaatgcacgcaagattaatctaagttcatggaacgagaaactggttataccccaaaattttccattctggactcccaagtaccagtctaggaaaccaccgtcatgctccggtaccaatgtcacggtggtccaaggtgatcggaatacaaccgaactaccaatgagtattgacgctcttgacagtttcattcgccttaatttgggaaactggaccggctctttccatcaatttgatggtcatggaaatttgatgcatagaattacaacgaaacttgctgtgggctcttatggtgaaggtgaactgatgagtttattacaaacgttatacatcaaacaacctccatctaccacttcatgttctggcgatgattgtgagtcagagtggtttgagtacaaaatcaaagagaccaacatgtttaccgtcgacaaatatcaacag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="59138" stop="61161"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59438" g_stop="59724" g_length="287"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="287" r_length="287" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59725" i_stop="59914" i_length="190">
            <donor d_prob="0.196" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59915" g_stop="60009" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="288" r_stop="382" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="60010" i_stop="60743" i_length="734">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60744" g_stop="60861" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="383" r_stop="500" r_length="118" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E331630" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>500</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E331630" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59438" e_stop="59724"/>
          <exon e_start="59915" e_stop="60009"/>
          <exon e_start="60744" e_stop="60861"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCCATCCGCCATGGCAACGGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCATGTCAGGATCAACTCCGTTCCTCTTTCTCTCTTTCTGTGGATGCATTGTCTTATTTTTGTCTATAACTTTATTATTGATAAATACACGTATATTTATGAATTTTTGATAAATATTCATATCCTATAATTTTTAGTTTGAGGTGGAAACGTGCATGGATTTGATTCCTTCATCTGCTTGATTTATTTTGCAGCAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAACGTGAGCTCCTATAGTTAGATTCTTCCCTGTATTAATAATGTGTCTTAACCTTGCTATGTTTCCGATGAAAAGTAAGTTAAATAGATTAACTGTCCTTAACAATTTTGTAGCTTCTTCGGTGACTAATATGTGTAAAGTATATATGTTAGTTTATACATTCTAACTTTGAGAATGATCCAATCTAATTCTTTTTGTAATTGTGAAATTGCTAGTACTTATGTAATTAGTAATTTAATAAAATTAAAGGTAGTTGTTAGTTATCCGAAGTTAAAAAACTCTTTTGAGATTTAGGAAAAGTTAAATTAGAATTGAGGAGAAAACCATGGAAATTTCAATGTTTACACTTCATTTTACATGGTTATAGTTTAATGGTATGTAGGTGAACTTTAGGGAATACTTGGAAATCCAGGTGATCTCTTTTTCTTGTTTGTGAATTTTGAGAAATTTTCCATTTAGTGGCATGCTATATTTAAGTGCAAGTAGATTTTGTCAGCCCAAAGCTCAAATTCTTCCACTGTTTTAAATAAAGTTGAGTTTGGAGAATTTATTAAGGAGGCCAATGTCACACATGCATTTCTGATTCATAAGCCCCTTTAGTTTGCTTTTTTATCTGCATAGAATTAGTTAGCAGTGGACACCAATGTATAGGGTATTTTCATTAAATTTGGGTACTGTTATATGTGTTCACTTTATGGTCTGGGAAACAAGTCGACTAACCGGCTTCAAAATTGTAGGTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAAATCAAAGAGACCAACATGTTTACCGTCGACAAATATCAACAG</genome_strand>
        <mrna_strand>TTCCATCCGCCATGGCAACGGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCAT..............................................................................................................................................................................................CAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAAATCAAAGAGACCAACATGTTTACCGTCGACAAATATCAACAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E244634" ref_strand="+" ref_description="SGN-E244634 [cLED-38-N24]">
      <seq>catccgccatggcaacggcgccagccatttttgtgccttccacttctctcgcttactccaatgcacgcaagattaatctaagttcatggaacgagaaactggttataccccaaaattttccattctggactcccaagtaccagtctaggaaaccaccgtcatgctccggtaccaatgtcacggtggtccaaggtgatcggaatacaaccgaactaccaatgagtattgacgctcttgacagtttcattcgccttaatttgggaaactggaccggctctttccatcaatttgatggtcatggaaatttgatgcatagaattacaacgaaacttgctgcgggctcttatggtgaaggtgaactgatgagtttattacaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="59141" stop="60308"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59441" g_stop="59724" g_length="284"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="284" r_length="284" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59725" i_stop="59914" i_length="190">
            <donor d_prob="0.196" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59915" g_stop="60008" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="285" r_stop="378" r_length="94" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E244634" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>378</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E244634" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59441" e_stop="59724"/>
          <exon e_start="59915" e_stop="60008"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATCCGCCATGGCAACGGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCATGTCAGGATCAACTCCGTTCCTCTTTCTCTCTTTCTGTGGATGCATTGTCTTATTTTTGTCTATAACTTTATTATTGATAAATACACGTATATTTATGAATTTTTGATAAATATTCATATCCTATAATTTTTAGTTTGAGGTGGAAACGTGCATGGATTTGATTCCTTCATCTGCTTGATTTATTTTGCAGCAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAA</genome_strand>
        <mrna_strand>CATCCGCCATGGCAACGGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTACTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCAT..............................................................................................................................................................................................CAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGCGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E201024" ref_strand="+" ref_description="SGN-E201024 [cLEC-5-F4]">
      <seq>atccgccatggcaacggcgccagccatttttgtgccttccacttctctcgcttcctccaatgcacgcaagattaatctaagttcatggaacgagaaactggttataccccaaaattttccattctggactcccaagtaccagtctaggaaaccaccgtcatgctccggtaccaatgtcacggtggtccaaggtgatcggaatacaaccgaactaccaatgagtattgacgctcttgacagttcattcgccttaatttgggaaactggac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="59142" stop="60011"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59442" g_stop="59711" g_length="270"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="269" r_length="269" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E201024" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>270</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E201024" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59442" e_stop="59711"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCCGCCATGGCAACGGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGAC</genome_strand>
        <mrna_strand>ATCCGCCATGGCAACGGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAG-TTCATTCGCCTTAATTTGGGAAACTGGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E266286" ref_strand="+" ref_description="SGN-E266286 [cLEI-3-N21]">
      <seq>aacggcgtcagccatttttgggcctttcacttctgtcgcttcctccaatgcacgcaagattaatctaagttcatggaacgagaaactggttataccccaaaattttccattctggactcccaagtaccagtctaggaaaccaccgtcatgctccggtaccaatgtcacggtggtccaaggtgatcggaatacaaccgaactaccaatgagtattgacgctcttgacagattcattcgccttaatttgggaaactggaccggctctttccatcaatttgatggtcatggaaatttgatgcatagaattacaacgaaacttgctgtgggctcttatggtgaaggtgaactgatgagtttattacaaacgttatacatcaaacaacctccatctaccacttcatgttctggcgatgattgtgagtcagagtggtttgagtacaaaatcaaagagaccaacatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="59154" stop="61138"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59454" g_stop="59724" g_length="271"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="271" r_length="271" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59725" i_stop="59914" i_length="190">
            <donor d_prob="0.196" d_score="0.98"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59915" g_stop="60009" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="272" r_stop="366" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="60010" i_stop="60743" i_length="734">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60744" g_stop="60838" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="367" r_stop="461" r_length="95" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E266286" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>461</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E266286" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59454" e_stop="59724"/>
          <exon e_start="59915" e_stop="60009"/>
          <exon e_start="60744" e_stop="60838"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACGGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCATGTCAGGATCAACTCCGTTCCTCTTTCTCTCTTTCTGTGGATGCATTGTCTTATTTTTGTCTATAACTTTATTATTGATAAATACACGTATATTTATGAATTTTTGATAAATATTCATATCCTATAATTTTTAGTTTGAGGTGGAAACGTGCATGGATTTGATTCCTTCATCTGCTTGATTTATTTTGCAGCAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAACGTGAGCTCCTATAGTTAGATTCTTCCCTGTATTAATAATGTGTCTTAACCTTGCTATGTTTCCGATGAAAAGTAAGTTAAATAGATTAACTGTCCTTAACAATTTTGTAGCTTCTTCGGTGACTAATATGTGTAAAGTATATATGTTAGTTTATACATTCTAACTTTGAGAATGATCCAATCTAATTCTTTTTGTAATTGTGAAATTGCTAGTACTTATGTAATTAGTAATTTAATAAAATTAAAGGTAGTTGTTAGTTATCCGAAGTTAAAAAACTCTTTTGAGATTTAGGAAAAGTTAAATTAGAATTGAGGAGAAAACCATGGAAATTTCAATGTTTACACTTCATTTTACATGGTTATAGTTTAATGGTATGTAGGTGAACTTTAGGGAATACTTGGAAATCCAGGTGATCTCTTTTTCTTGTTTGTGAATTTTGAGAAATTTTCCATTTAGTGGCATGCTATATTTAAGTGCAAGTAGATTTTGTCAGCCCAAAGCTCAAATTCTTCCACTGTTTTAAATAAAGTTGAGTTTGGAGAATTTATTAAGGAGGCCAATGTCACACATGCATTTCTGATTCATAAGCCCCTTTAGTTTGCTTTTTTATCTGCATAGAATTAGTTAGCAGTGGACACCAATGTATAGGGTATTTTCATTAAATTTGGGTACTGTTATATGTGTTCACTTTATGGTCTGGGAAACAAGTCGACTAACCGGCTTCAAAATTGTAGGTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAAATCAAAGAGACCAACATGT</genome_strand>
        <mrna_strand>AACGGCGTCAGCCATTTTTGGGCCTTTCACTTCTGTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGATTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCAT..............................................................................................................................................................................................CAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAAATCAAAGAGACCAACATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E209145" ref_strand="+" ref_description="SGN-E209145 [cLEC-38-M14]">
      <seq>aacggcgccagccatttttgtgccttccacttctctcgcttcctccaatgcacgcaagattaatctaagttcatggaacgagaaactggttataccccaaaattttccattctggactcccaagtaccagtctaggaaaccaccgtcatgctccggtaccaatgtcacggtggtccaaggtgatcggaatacaaccgaactaccaatgagtattgacgctcttgacagtttcattcgccttaatttgggaaactggaccggctctttccatcaatttgatggtcatggaaatttgatgcatagaattacaacgaaacttgctgtgggctcttatggtgaaggtgaactgatgagtttattacaaacgttatacatcaaacaacctccatctaccacttcatgttctggcgatgattgtgagtcagagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="59154" stop="61105"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59454" g_stop="59724" g_length="271"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="271" r_length="271" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59725" i_stop="59914" i_length="190">
            <donor d_prob="0.196" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59915" g_stop="60009" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="272" r_stop="366" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="60010" i_stop="60743" i_length="734">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60744" g_stop="60805" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="367" r_stop="428" r_length="62" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E209145" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>428</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E209145" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59454" e_stop="59724"/>
          <exon e_start="59915" e_stop="60009"/>
          <exon e_start="60744" e_stop="60805"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACGGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCATGTCAGGATCAACTCCGTTCCTCTTTCTCTCTTTCTGTGGATGCATTGTCTTATTTTTGTCTATAACTTTATTATTGATAAATACACGTATATTTATGAATTTTTGATAAATATTCATATCCTATAATTTTTAGTTTGAGGTGGAAACGTGCATGGATTTGATTCCTTCATCTGCTTGATTTATTTTGCAGCAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAACGTGAGCTCCTATAGTTAGATTCTTCCCTGTATTAATAATGTGTCTTAACCTTGCTATGTTTCCGATGAAAAGTAAGTTAAATAGATTAACTGTCCTTAACAATTTTGTAGCTTCTTCGGTGACTAATATGTGTAAAGTATATATGTTAGTTTATACATTCTAACTTTGAGAATGATCCAATCTAATTCTTTTTGTAATTGTGAAATTGCTAGTACTTATGTAATTAGTAATTTAATAAAATTAAAGGTAGTTGTTAGTTATCCGAAGTTAAAAAACTCTTTTGAGATTTAGGAAAAGTTAAATTAGAATTGAGGAGAAAACCATGGAAATTTCAATGTTTACACTTCATTTTACATGGTTATAGTTTAATGGTATGTAGGTGAACTTTAGGGAATACTTGGAAATCCAGGTGATCTCTTTTTCTTGTTTGTGAATTTTGAGAAATTTTCCATTTAGTGGCATGCTATATTTAAGTGCAAGTAGATTTTGTCAGCCCAAAGCTCAAATTCTTCCACTGTTTTAAATAAAGTTGAGTTTGGAGAATTTATTAAGGAGGCCAATGTCACACATGCATTTCTGATTCATAAGCCCCTTTAGTTTGCTTTTTTATCTGCATAGAATTAGTTAGCAGTGGACACCAATGTATAGGGTATTTTCATTAAATTTGGGTACTGTTATATGTGTTCACTTTATGGTCTGGGAAACAAGTCGACTAACCGGCTTCAAAATTGTAGGTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGT</genome_strand>
        <mrna_strand>AACGGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCAT..............................................................................................................................................................................................CAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E293377" ref_strand="+" ref_description="SGN-E293377 [cLET-18-H3]">
      <seq>ggcgccagccatttttgtgccttccacttctctcgcttcctccaatgcacgcaagattaatctaagttcatggaacgagaaactggttataccccaaaattttccattctggactcccaagtaccagtctaggaaaccaccgtcatgctccggtaccaatgtcacggtggtccaaggtgatcggaatacaaccgaactaccaatgagtattgacgctcttgacagtttcattcgccttaatttgggaaactggaccggctctttccatcaatttgatggtcatggaaatttgatgcatagaattacaacgaaacttgctgtgggctcttatggtgaaggtgaactgatgagtttattacaaacgttatacatcaaacaacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="59157" stop="61061"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59457" g_stop="59724" g_length="268"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="268" r_length="268" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59725" i_stop="59914" i_length="190">
            <donor d_prob="0.196" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59915" g_stop="60009" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="269" r_stop="363" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="60010" i_stop="60743" i_length="734">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60744" g_stop="60761" g_length="18"/>
          <reference_exon_boundary r_type="cDNA" r_start="364" r_stop="381" r_length="18" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E293377" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>381</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E293377" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59457" e_stop="59724"/>
          <exon e_start="59915" e_stop="60009"/>
          <exon e_start="60744" e_stop="60761"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCATGTCAGGATCAACTCCGTTCCTCTTTCTCTCTTTCTGTGGATGCATTGTCTTATTTTTGTCTATAACTTTATTATTGATAAATACACGTATATTTATGAATTTTTGATAAATATTCATATCCTATAATTTTTAGTTTGAGGTGGAAACGTGCATGGATTTGATTCCTTCATCTGCTTGATTTATTTTGCAGCAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAACGTGAGCTCCTATAGTTAGATTCTTCCCTGTATTAATAATGTGTCTTAACCTTGCTATGTTTCCGATGAAAAGTAAGTTAAATAGATTAACTGTCCTTAACAATTTTGTAGCTTCTTCGGTGACTAATATGTGTAAAGTATATATGTTAGTTTATACATTCTAACTTTGAGAATGATCCAATCTAATTCTTTTTGTAATTGTGAAATTGCTAGTACTTATGTAATTAGTAATTTAATAAAATTAAAGGTAGTTGTTAGTTATCCGAAGTTAAAAAACTCTTTTGAGATTTAGGAAAAGTTAAATTAGAATTGAGGAGAAAACCATGGAAATTTCAATGTTTACACTTCATTTTACATGGTTATAGTTTAATGGTATGTAGGTGAACTTTAGGGAATACTTGGAAATCCAGGTGATCTCTTTTTCTTGTTTGTGAATTTTGAGAAATTTTCCATTTAGTGGCATGCTATATTTAAGTGCAAGTAGATTTTGTCAGCCCAAAGCTCAAATTCTTCCACTGTTTTAAATAAAGTTGAGTTTGGAGAATTTATTAAGGAGGCCAATGTCACACATGCATTTCTGATTCATAAGCCCCTTTAGTTTGCTTTTTTATCTGCATAGAATTAGTTAGCAGTGGACACCAATGTATAGGGTATTTTCATTAAATTTGGGTACTGTTATATGTGTTCACTTTATGGTCTGGGAAACAAGTCGACTAACCGGCTTCAAAATTGTAGGTTATACATCAAACAACC</genome_strand>
        <mrna_strand>GGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCAT..............................................................................................................................................................................................CAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATACATCAAACAACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E273152" ref_strand="+" ref_description="SGN-E273152 [cLEM-24-P19]">
      <seq>catttttgtgccttccacttctctcgcttcctccaatgcacgccaagattaatctaagttcatggaacgagaaactggttataccccaaaattttccattctggactcccaagtaccagtctaggaaaccaccgtcatgctccggtaccaatgtcacggtggtccaaggtgatcggaatacaaccgaactaccaatgagtattgacgctcttgacagtttcattcgccttaatttgggaaactggaccggctctttccatcaatttgatggtcatggaaatttgatgcatagaattacaacgaaacttgctgtgggctcttatggtgaaggtgaactgatgagtttattacaaacgttatacatcaaacaacctccatctaccacttcatgttctggcgatgattgtgagtcagagtggtttgagtacaaaatcaaagagaccaacatgtttaccgtcgacaaatatcaacagattggcttcttccccaaggaaaaggcatacgcactaagatatcagactgctggcatgttggagactgtgttaagacagggagtgctaggtgaagatgatatcggagaagaatcaccaagaaatctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="59166" stop="61418"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59466" g_stop="59724" g_length="259"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="260" r_length="260" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59725" i_stop="59914" i_length="190">
            <donor d_prob="0.196" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59915" g_stop="60009" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="261" r_stop="355" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="60010" i_stop="60743" i_length="734">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60744" g_stop="60861" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="356" r_stop="473" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="60862" i_stop="60992" i_length="131">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.442" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="60993" g_stop="61111" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="474" r_stop="592" r_length="119" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E273152" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>591</cumulative_length_of_scored_exons>
        <coverage percentage="0.987" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E273152" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59466" e_stop="59724"/>
          <exon e_start="59915" e_stop="60009"/>
          <exon e_start="60744" e_stop="60861"/>
          <exon e_start="60993" e_stop="61111"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACG-CAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCATGTCAGGATCAACTCCGTTCCTCTTTCTCTCTTTCTGTGGATGCATTGTCTTATTTTTGTCTATAACTTTATTATTGATAAATACACGTATATTTATGAATTTTTGATAAATATTCATATCCTATAATTTTTAGTTTGAGGTGGAAACGTGCATGGATTTGATTCCTTCATCTGCTTGATTTATTTTGCAGCAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAACGTGAGCTCCTATAGTTAGATTCTTCCCTGTATTAATAATGTGTCTTAACCTTGCTATGTTTCCGATGAAAAGTAAGTTAAATAGATTAACTGTCCTTAACAATTTTGTAGCTTCTTCGGTGACTAATATGTGTAAAGTATATATGTTAGTTTATACATTCTAACTTTGAGAATGATCCAATCTAATTCTTTTTGTAATTGTGAAATTGCTAGTACTTATGTAATTAGTAATTTAATAAAATTAAAGGTAGTTGTTAGTTATCCGAAGTTAAAAAACTCTTTTGAGATTTAGGAAAAGTTAAATTAGAATTGAGGAGAAAACCATGGAAATTTCAATGTTTACACTTCATTTTACATGGTTATAGTTTAATGGTATGTAGGTGAACTTTAGGGAATACTTGGAAATCCAGGTGATCTCTTTTTCTTGTTTGTGAATTTTGAGAAATTTTCCATTTAGTGGCATGCTATATTTAAGTGCAAGTAGATTTTGTCAGCCCAAAGCTCAAATTCTTCCACTGTTTTAAATAAAGTTGAGTTTGGAGAATTTATTAAGGAGGCCAATGTCACACATGCATTTCTGATTCATAAGCCCCTTTAGTTTGCTTTTTTATCTGCATAGAATTAGTTAGCAGTGGACACCAATGTATAGGGTATTTTCATTAAATTTGGGTACTGTTATATGTGTTCACTTTATGGTCTGGGAAACAAGTCGACTAACCGGCTTCAAAATTGTAGGTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAAATCAAAGAGACCAACATGTTTACCGTCGACAAATATCAACAGGTGAGCTTCACTAAGACAGAGAACTAACTTATATCCCTTCGCTGGTCATACTTAATAAAGACTGTTATCTGCAGTTTCTGTTTCTTTTCAGATTTTATTGCATTTGAGGTACCACTAAAAGTAGTTTGCAGATTGGCTTCTTCCCCAAGGAAAAGGCATACGCACTAAGATATCAGACTGCTGGCATGTTGGAGACTGTGTTAAGACAGGGAGTGCTAGGTGAAGATGATATCGGAGAAGAATCACCAAG</genome_strand>
        <mrna_strand>CATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCAT..............................................................................................................................................................................................CAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAAATCAAAGAGACCAACATGTTTACCGTCGACAAATATCAACAG...................................................................................................................................ATTGGCTTCTTCCCCAAGGAAAAGGCATACGCACTAAGATATCAGACTGCTGGCATGTTGGAGACTGTGTTAAGACAGGGAGTGCTAGGTGAAGATGATATCGGAGAAGAATCACCAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E272824" ref_strand="+" ref_description="SGN-E272824 [cLEM-25-K19]">
      <seq>catttttgtgccttccacttctctcgcttcctccaatgcacgcaagattaatctaagttcatggaacgagaaactggttataccccaaaattttccattctggactcccaagtaccagtctaggaaaccaccgtcatgctccggtaccaatgtcacggtggtccaaggtgatcggaatacaaccgaactaccaatgagtattgacgctcttgacagtttcattcgccttaatttgggaaactggaccggctctttccatcaatttgatggtcatggaaatttgatgcatagaattacaacgaaacttgctgtgggctcttatggtgaaggtgaactgatgagtttattacaaacgttatacatcaaacaacctccatctaccacttcatgttctggcgatgattgtgagtcagagtggtttgagtacaaaatcaaaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="59166" stop="61127"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59466" g_stop="59724" g_length="259"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="259" r_length="259" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59725" i_stop="59914" i_length="190">
            <donor d_prob="0.196" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59915" g_stop="60009" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="260" r_stop="354" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="60010" i_stop="60743" i_length="734">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60744" g_stop="60827" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="355" r_stop="438" r_length="84" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E272824" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>438</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E272824" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59466" e_stop="59724"/>
          <exon e_start="59915" e_stop="60009"/>
          <exon e_start="60744" e_stop="60827"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCATGTCAGGATCAACTCCGTTCCTCTTTCTCTCTTTCTGTGGATGCATTGTCTTATTTTTGTCTATAACTTTATTATTGATAAATACACGTATATTTATGAATTTTTGATAAATATTCATATCCTATAATTTTTAGTTTGAGGTGGAAACGTGCATGGATTTGATTCCTTCATCTGCTTGATTTATTTTGCAGCAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAACGTGAGCTCCTATAGTTAGATTCTTCCCTGTATTAATAATGTGTCTTAACCTTGCTATGTTTCCGATGAAAAGTAAGTTAAATAGATTAACTGTCCTTAACAATTTTGTAGCTTCTTCGGTGACTAATATGTGTAAAGTATATATGTTAGTTTATACATTCTAACTTTGAGAATGATCCAATCTAATTCTTTTTGTAATTGTGAAATTGCTAGTACTTATGTAATTAGTAATTTAATAAAATTAAAGGTAGTTGTTAGTTATCCGAAGTTAAAAAACTCTTTTGAGATTTAGGAAAAGTTAAATTAGAATTGAGGAGAAAACCATGGAAATTTCAATGTTTACACTTCATTTTACATGGTTATAGTTTAATGGTATGTAGGTGAACTTTAGGGAATACTTGGAAATCCAGGTGATCTCTTTTTCTTGTTTGTGAATTTTGAGAAATTTTCCATTTAGTGGCATGCTATATTTAAGTGCAAGTAGATTTTGTCAGCCCAAAGCTCAAATTCTTCCACTGTTTTAAATAAAGTTGAGTTTGGAGAATTTATTAAGGAGGCCAATGTCACACATGCATTTCTGATTCATAAGCCCCTTTAGTTTGCTTTTTTATCTGCATAGAATTAGTTAGCAGTGGACACCAATGTATAGGGTATTTTCATTAAATTTGGGTACTGTTATATGTGTTCACTTTATGGTCTGGGAAACAAGTCGACTAACCGGCTTCAAAATTGTAGGTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAAATCAAAGA</genome_strand>
        <mrna_strand>CATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCAT..............................................................................................................................................................................................CAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAAATCAAAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E367453" ref_strand="+" ref_description="SGN-E367453 [cLPT-7-N14]">
      <seq>cacttttctcgcttcctccaatgcacgcaagattaatctaagttcatggaacgagaaactggttataccccaaaattttccattctggactcccaagtaccagtctaggaaaccaccgtcatgctccggtaccaatgtcacggtggtccaaggtgatcggaatacaaccgaactaccaatgagtgttgaagctcttgacagtttcattcgccttaatttgggaaactggaccggctctttccatcaatttgatggtcatggaaatttgatgcatagaattacaacgaaacttgctgtgggctcttatggtgaaggtgaactgatgagtttattacaaacgttataca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="59181" stop="60313"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59481" g_stop="59724" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="244" r_length="244" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59725" i_stop="59914" i_length="190">
            <donor d_prob="0.196" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59915" g_stop="60009" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="245" r_stop="339" r_length="95" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E367453" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>339</cumulative_length_of_scored_exons>
        <coverage percentage="0.977" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E367453" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59481" e_stop="59724"/>
          <exon e_start="59915" e_stop="60009"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCATGTCAGGATCAACTCCGTTCCTCTTTCTCTCTTTCTGTGGATGCATTGTCTTATTTTTGTCTATAACTTTATTATTGATAAATACACGTATATTTATGAATTTTTGATAAATATTCATATCCTATAATTTTTAGTTTGAGGTGGAAACGTGCATGGATTTGATTCCTTCATCTGCTTGATTTATTTTGCAGCAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAAC</genome_strand>
        <mrna_strand>CACTTTTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTGTTGAAGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCAT..............................................................................................................................................................................................CAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E291782" ref_strand="+" ref_description="SGN-E291782 [cLET-7-E7]">
      <seq>atctaagttcatggaacgagaaactggttataccccaaaattttccattctggactcccaagtaccagtctaggaaaccaccgtcatgctccggtaccaatgtcacggtggtccaaggtgatcggaatacaaccgaactaccaatgangtatttnntnggggnnaacgctcttgacagtttcattcgccttaatttgggaaactggaccggctctttccatcaatttgatggtcatggaaatttgatgcatagaattacaacgaaacttgctgtgggctcttatggtgaaggtgaactgatgagtttattacaaacgttatacatcaaacaacctccatctaccacttcatgttctggcgatgattgtgagtcagagtggtttgagtacaaaatcaaagagaccaacatgtttaccgtcgacaaatatcaacagattggcttcttccccaaggaaaaggcatacgcactaagatatcagactgctggcatgttggagactgtgttaagacagggagtgctaggtgaagatgatatcggagaagaatcaccaagaaatctgaagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="59216" stop="61418"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59516" g_stop="59724" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="221" r_length="221" r_score="0.885"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59725" i_stop="59914" i_length="190">
            <donor d_prob="0.196" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59915" g_stop="60009" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="222" r_stop="316" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="60010" i_stop="60743" i_length="734">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60744" g_stop="60861" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="317" r_stop="434" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="60862" i_stop="60992" i_length="131">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.442" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="60993" g_stop="61111" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="435" r_stop="553" r_length="119" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E291782" ref_strand="+">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>541</cumulative_length_of_scored_exons>
        <coverage percentage="0.959" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E291782" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59516" e_stop="59724"/>
          <exon e_start="59915" e_stop="60009"/>
          <exon e_start="60744" e_stop="60861"/>
          <exon e_start="60993" e_stop="61111"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGA-GTA--T--T----G---ACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCATGTCAGGATCAACTCCGTTCCTCTTTCTCTCTTTCTGTGGATGCATTGTCTTATTTTTGTCTATAACTTTATTATTGATAAATACACGTATATTTATGAATTTTTGATAAATATTCATATCCTATAATTTTTAGTTTGAGGTGGAAACGTGCATGGATTTGATTCCTTCATCTGCTTGATTTATTTTGCAGCAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAACGTGAGCTCCTATAGTTAGATTCTTCCCTGTATTAATAATGTGTCTTAACCTTGCTATGTTTCCGATGAAAAGTAAGTTAAATAGATTAACTGTCCTTAACAATTTTGTAGCTTCTTCGGTGACTAATATGTGTAAAGTATATATGTTAGTTTATACATTCTAACTTTGAGAATGATCCAATCTAATTCTTTTTGTAATTGTGAAATTGCTAGTACTTATGTAATTAGTAATTTAATAAAATTAAAGGTAGTTGTTAGTTATCCGAAGTTAAAAAACTCTTTTGAGATTTAGGAAAAGTTAAATTAGAATTGAGGAGAAAACCATGGAAATTTCAATGTTTACACTTCATTTTACATGGTTATAGTTTAATGGTATGTAGGTGAACTTTAGGGAATACTTGGAAATCCAGGTGATCTCTTTTTCTTGTTTGTGAATTTTGAGAAATTTTCCATTTAGTGGCATGCTATATTTAAGTGCAAGTAGATTTTGTCAGCCCAAAGCTCAAATTCTTCCACTGTTTTAAATAAAGTTGAGTTTGGAGAATTTATTAAGGAGGCCAATGTCACACATGCATTTCTGATTCATAAGCCCCTTTAGTTTGCTTTTTTATCTGCATAGAATTAGTTAGCAGTGGACACCAATGTATAGGGTATTTTCATTAAATTTGGGTACTGTTATATGTGTTCACTTTATGGTCTGGGAAACAAGTCGACTAACCGGCTTCAAAATTGTAGGTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAAATCAAAGAGACCAACATGTTTACCGTCGACAAATATCAACAGGTGAGCTTCACTAAGACAGAGAACTAACTTATATCCCTTCGCTGGTCATACTTAATAAAGACTGTTATCTGCAGTTTCTGTTTCTTTTCAGATTTTATTGCATTTGAGGTACCACTAAAAGTAGTTTGCAGATTGGCTTCTTCCCCAAGGAAAAGGCATACGCACTAAGATATCAGACTGCTGGCATGTTGGAGACTGTGTTAAGACAGGGAGTGCTAGGTGAAGATGATATCGGAGAAGAATCACCAAG</genome_strand>
        <mrna_strand>ATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGANGTATTTNNTNGGGGNNAACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCAT..............................................................................................................................................................................................CAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAAATCAAAGAGACCAACATGTTTACCGTCGACAAATATCAACAG...................................................................................................................................ATTGGCTTCTTCCCCAAGGAAAAGGCATACGCACTAAGATATCAGACTGCTGGCATGTTGGAGACTGTGTTAAGACAGGGAGTGCTAGGTGAAGATGATATCGGAGAAGAATCACCAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E321660" ref_strand="+" ref_description="SGN-E321660 [cTOB-25-F24]">
      <seq>ttataccccaaaattttccattctggactcccaagtaccagtctaggaaaccaccgtcatgctccggtaccaatgtcacggtggtccaaggtgatcggaatacaaccgaactaccaatgagtattgacgctcttgacagtttcattcgccttaatttgggaaactggaccggctctttccatcaatttgatggtcatggaaatttgatgcatagaattacaacgaaacttgctgtgggctcttatggtgaaggtgaactgatgagtttattacaaacgttatacatcaaacaacctccatctaccacttcatgttctggcgatgattgtgagtcagagtggtttgagtacaaaatcaaagagaccaacatgtttaccgtcgacaaatatcaacagattggcttcttccccaaggaaaaggcatacgcactaagatatcagactgctggcatgttggagactgtgttaagacagggagtgctangtgaagatgatatcggagaagaatcaccaagaaatctgaagcttccctctaaacgtccttctattgtatgtgaaaattgtctttattcactggagaaagatangcgagtgagagcatttcatataatggacccaaaaggagtactggaaatgctttctgtttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="59243" stop="62221"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59543" g_stop="59724" g_length="182"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="182" r_length="182" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59725" i_stop="59914" i_length="190">
            <donor d_prob="0.196" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59915" g_stop="60009" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="183" r_stop="277" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="60010" i_stop="60743" i_length="734">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60744" g_stop="60861" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="278" r_stop="395" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="60862" i_stop="60992" i_length="131">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.442" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="60993" g_stop="61111" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="396" r_stop="514" r_length="119" r_score="0.992"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="61112" i_stop="61789" i_length="678">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.762" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="61790" g_stop="61921" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="515" r_stop="646" r_length="132" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E321660" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>646</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E321660" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59543" e_stop="59724"/>
          <exon e_start="59915" e_stop="60009"/>
          <exon e_start="60744" e_stop="60861"/>
          <exon e_start="60993" e_stop="61111"/>
          <exon e_start="61790" e_stop="61921"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCATGTCAGGATCAACTCCGTTCCTCTTTCTCTCTTTCTGTGGATGCATTGTCTTATTTTTGTCTATAACTTTATTATTGATAAATACACGTATATTTATGAATTTTTGATAAATATTCATATCCTATAATTTTTAGTTTGAGGTGGAAACGTGCATGGATTTGATTCCTTCATCTGCTTGATTTATTTTGCAGCAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAACGTGAGCTCCTATAGTTAGATTCTTCCCTGTATTAATAATGTGTCTTAACCTTGCTATGTTTCCGATGAAAAGTAAGTTAAATAGATTAACTGTCCTTAACAATTTTGTAGCTTCTTCGGTGACTAATATGTGTAAAGTATATATGTTAGTTTATACATTCTAACTTTGAGAATGATCCAATCTAATTCTTTTTGTAATTGTGAAATTGCTAGTACTTATGTAATTAGTAATTTAATAAAATTAAAGGTAGTTGTTAGTTATCCGAAGTTAAAAAACTCTTTTGAGATTTAGGAAAAGTTAAATTAGAATTGAGGAGAAAACCATGGAAATTTCAATGTTTACACTTCATTTTACATGGTTATAGTTTAATGGTATGTAGGTGAACTTTAGGGAATACTTGGAAATCCAGGTGATCTCTTTTTCTTGTTTGTGAATTTTGAGAAATTTTCCATTTAGTGGCATGCTATATTTAAGTGCAAGTAGATTTTGTCAGCCCAAAGCTCAAATTCTTCCACTGTTTTAAATAAAGTTGAGTTTGGAGAATTTATTAAGGAGGCCAATGTCACACATGCATTTCTGATTCATAAGCCCCTTTAGTTTGCTTTTTTATCTGCATAGAATTAGTTAGCAGTGGACACCAATGTATAGGGTATTTTCATTAAATTTGGGTACTGTTATATGTGTTCACTTTATGGTCTGGGAAACAAGTCGACTAACCGGCTTCAAAATTGTAGGTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAAATCAAAGAGACCAACATGTTTACCGTCGACAAATATCAACAGGTGAGCTTCACTAAGACAGAGAACTAACTTATATCCCTTCGCTGGTCATACTTAATAAAGACTGTTATCTGCAGTTTCTGTTTCTTTTCAGATTTTATTGCATTTGAGGTACCACTAAAAGTAGTTTGCAGATTGGCTTCTTCCCCAAGGAAAAGGCATACGCACTAAGATATCAGACTGCTGGCATGTTGGAGACTGTGTTAAGACAGGGAGTGCTAGGTGAAGATGATATCGGAGAAGAATCACCAAGGTAAATGTTTCTTACGTGGAGATGAATCAGTCAAAATAAGTTAAAATATTAGATCTGATGAGATCAAAGGTTGAAATTATGCATATGTTTTGCTGCTAGCTTTATTTTGGAAATGCTACCCAGTATGACCTTAATGTTGCTGTTTGTCACTTTTCCCCTTGGCTCTGCTGTGTTCTGGTCTGTGTGCTGTTCTGGTCTGTGTGCTTATCGGTTATGTTTTCAAACATATTCAGTTTTCACCCTGTACTGAAACAAACCAAAAAGGCTAATGCCTAAGAATTTGAGTAAACAAATTCCAAAAGGCAAATAAGACAATCAATATGTAAAGAATCCTCTCATCATAGCAGTAATTAGTTCCCAACTTAAAAGATATCAACTCTGTAAAAGAATCTCACACAATTAAGCATTCATTAGTAGATCTTTCCTACTAACAAATAAATATTGGTGATCTTGGACATCTCATAAGCTTCATCAGATCAATTAACTTGCATATTATTGCTTCTGACTTTCATGTTAGAAATTATAGACAGTCTTTTAATATCCAATTGCAAAGGTTATGTAAATTGCACGGGATCTTTTCTCATGAATGACTGTTCATATTTTTTGATTAGCTTTATCTTTTGGTTCCTGGCTTTGAATTTCTTAGTATCATTCTATAATTCTTCTTTTCTTTCACAGAAATCTGAAGCTTCCCTCTAAACGTCCTTCTATTGTATGTGAAAATTGTCTTTATTCACTGGAGAAAGATAGGCGAGTGAGAGCATTTCATATAATGGACCCAAAAGGAGTACTGGAAATGCTTCTTGTTTT</genome_strand>
        <mrna_strand>TTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCAT..............................................................................................................................................................................................CAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAAATCAAAGAGACCAACATGTTTACCGTCGACAAATATCAACAG...................................................................................................................................ATTGGCTTCTTCCCCAAGGAAAAGGCATACGCACTAAGATATCAGACTGCTGGCATGTTGGAGACTGTGTTAAGACAGGGAGTGCTANGTGAAGATGATATCGGAGAAGAATCACCAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATCTGAAGCTTCCCTCTAAACGTCCTTCTATTGTATGTGAAAATTGTCTTTATTCACTGGAGAAAGATANGCGAGTGAGAGCATTTCATATAATGGACCCAAAAGGAGTACTGGAAATGCTTTCTGTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E320123" ref_strand="+" ref_description="SGN-E320123 [cTOB-21-L19]">
      <seq>accaccgtcatgctccggtaccaatgtcacggtgggccaaggtgatcggaatacaaccgaactaccaatgagtattgacgctcttgacagtttcattcgccttaatttgggaaactggaccggctctttccatcaatttgatggtcatggaaatttgatgcatagaattacaacgaaacttgctgtgggctcttatggtgaaggtgaactgatgagtttattacaaacgttatacatcaaacaacctccatctaccacttcatgttctggcgatgattgtgagtcagagtggtttgagtacaaaatcaaagagaccaacatgtttaccgtcgacaaatatcaacagtgtctgtttcttttcagattttattgcatttgaggtaccactaaaagtagtttgcagattggcttcttccccaaggaaaaggcatacgcactaagatatcagactgctggcatgttggagactgtgttaagacagggagtgctaggtgaagatgatatcggagaagaatcaccaagaaatctgaagcttccctctaaacgtccttctattgtatgtgaaaattgtctttattcactggagaaagataggcgagtgagagcatttcatataatggacccgaaaggagtactggaaatgcttcttgttttccttgaaagagacggaacggagaggccattcctccctcctttgacgatttcaggacgatactgaaagaatctgcctcatct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="59292" stop="62277"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59592" g_stop="59724" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="133" r_length="133" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59725" i_stop="59914" i_length="190">
            <donor d_prob="0.196" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59915" g_stop="60009" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="134" r_stop="228" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="60010" i_stop="60743" i_length="734">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60744" g_stop="60861" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="229" r_stop="346" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="60862" i_stop="60935" i_length="74">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="60936" g_stop="61111" g_length="176"/>
          <reference_exon_boundary r_type="cDNA" r_start="347" r_stop="522" r_length="176" r_score="0.994"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="61112" i_stop="61789" i_length="678">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.762" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="61790" g_stop="61976" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="523" r_stop="707" r_length="185" r_score="0.973"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="61977" i_stop="62107" i_length="131">
            <donor d_prob="0.869" d_score="0.92"/>
            <acceptor a_prob="0.974" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="62108" g_stop="62136" g_length="29"/>
          <reference_exon_boundary r_type="cDNA" r_start="708" r_stop="735" r_length="28" r_score="0.931"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E320123" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>738</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E320123" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59592" e_stop="59724"/>
          <exon e_start="59915" e_stop="60009"/>
          <exon e_start="60744" e_stop="60861"/>
          <exon e_start="60936" e_stop="61111"/>
          <exon e_start="61790" e_stop="61976"/>
          <exon e_start="62108" e_stop="62136"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCATGTCAGGATCAACTCCGTTCCTCTTTCTCTCTTTCTGTGGATGCATTGTCTTATTTTTGTCTATAACTTTATTATTGATAAATACACGTATATTTATGAATTTTTGATAAATATTCATATCCTATAATTTTTAGTTTGAGGTGGAAACGTGCATGGATTTGATTCCTTCATCTGCTTGATTTATTTTGCAGCAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAACGTGAGCTCCTATAGTTAGATTCTTCCCTGTATTAATAATGTGTCTTAACCTTGCTATGTTTCCGATGAAAAGTAAGTTAAATAGATTAACTGTCCTTAACAATTTTGTAGCTTCTTCGGTGACTAATATGTGTAAAGTATATATGTTAGTTTATACATTCTAACTTTGAGAATGATCCAATCTAATTCTTTTTGTAATTGTGAAATTGCTAGTACTTATGTAATTAGTAATTTAATAAAATTAAAGGTAGTTGTTAGTTATCCGAAGTTAAAAAACTCTTTTGAGATTTAGGAAAAGTTAAATTAGAATTGAGGAGAAAACCATGGAAATTTCAATGTTTACACTTCATTTTACATGGTTATAGTTTAATGGTATGTAGGTGAACTTTAGGGAATACTTGGAAATCCAGGTGATCTCTTTTTCTTGTTTGTGAATTTTGAGAAATTTTCCATTTAGTGGCATGCTATATTTAAGTGCAAGTAGATTTTGTCAGCCCAAAGCTCAAATTCTTCCACTGTTTTAAATAAAGTTGAGTTTGGAGAATTTATTAAGGAGGCCAATGTCACACATGCATTTCTGATTCATAAGCCCCTTTAGTTTGCTTTTTTATCTGCATAGAATTAGTTAGCAGTGGACACCAATGTATAGGGTATTTTCATTAAATTTGGGTACTGTTATATGTGTTCACTTTATGGTCTGGGAAACAAGTCGACTAACCGGCTTCAAAATTGTAGGTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAAATCAAAGAGACCAACATGTTTACCGTCGACAAATATCAACAGGTGAGCTTCACTAAGACAGAGAACTAACTTATATCCCTTCGCTGGTCATACTTAATAAAGACTGTTATCTGCAGTTTCTGTTTCTTTTCAGATTTTATTGCATTTGAGGTACCACTAAAAGTAGTTTGCAGATTGGCTTCTTCCCCAAGGAAAAGGCATACGCACTAAGATATCAGACTGCTGGCATGTTGGAGACTGTGTTAAGACAGGGAGTGCTAGGTGAAGATGATATCGGAGAAGAATCACCAAGGTAAATGTTTCTTACGTGGAGATGAATCAGTCAAAATAAGTTAAAATATTAGATCTGATGAGATCAAAGGTTGAAATTATGCATATGTTTTGCTGCTAGCTTTATTTTGGAAATGCTACCCAGTATGACCTTAATGTTGCTGTTTGTCACTTTTCCCCTTGGCTCTGCTGTGTTCTGGTCTGTGTGCTGTTCTGGTCTGTGTGCTTATCGGTTATGTTTTCAAACATATTCAGTTTTCACCCTGTACTGAAACAAACCAAAAAGGCTAATGCCTAAGAATTTGAGTAAACAAATTCCAAAAGGCAAATAAGACAATCAATATGTAAAGAATCCTCTCATCATAGCAGTAATTAGTTCCCAACTTAAAAGATATCAACTCTGTAAAAGAATCTCACACAATTAAGCATTCATTAGTAGATCTTTCCTACTAACAAATAAATATTGGTGATCTTGGACATCTCATAAGCTTCATCAGATCAATTAACTTGCATATTATTGCTTCTGACTTTCATGTTAGAAATTATAGACAGTCTTTTAATATCCAATTGCAAAGGTTATGTAAATTGCACGGGATCTTTTCTCATGAATGACTGTTCATATTTTTTGATTAGCTTTATCTTTTGGTTCCTGGCTTTGAATTTCTTAGTATCATTCTATAATTCTTCTTTTCTTTCACAGAAATCTGAAGCTTCCCTCTAAACGTCCTTCTATTGTATGTGAAAATTGTCTTTATTCACTGGAGAAAGATAGGCGAGTGAGAGCATTTCATATAATGGACCCAAAAGGAGTACTGGAAATGCTTCTTGTTTTCCTTGAAGAAAGAGGGAACGGAGAGGCCATTCCTCCCTCCTTTGACGATTTCAAGGTAATTTTGACTTGAAAGGGGAAGGGTTGCCCTTCTATTCTTCGTTTGGACTACCTAAACATAGTTTGATTCAACATGTTAGTTACCAGAACCAAATGATTGTTCTTATGCATTCCATGGTCATCTTGTAGGAGGATACTGAAAGAATTCTGCCTCATCT</genome_strand>
        <mrna_strand>ACCACCGTCATGCTCCGGTACCAATGTCACGGTGGGCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCAT..............................................................................................................................................................................................CAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAAATCAAAGAGACCAACATGTTTACCGTCGACAAATATCAACAG..........................................................................TGTCTGTTTCTTTTCAGATTTTATTGCATTTGAGGTACCACTAAAAGTAGTTTGCAGATTGGCTTCTTCCCCAAGGAAAAGGCATACGCACTAAGATATCAGACTGCTGGCATGTTGGAGACTGTGTTAAGACAGGGAGTGCTAGGTGAAGATGATATCGGAGAAGAATCACCAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATCTGAAGCTTCCCTCTAAACGTCCTTCTATTGTATGTGAAAATTGTCTTTATTCACTGGAGAAAGATAGGCGAGTGAGAGCATTTCATATAATGGACCCGAAAGGAGTACTGGAAATGCTTCTTGTTTTCCTTGAA-AGAGACGGAACGGAGAGGCCATTCCTCCCTCCTTTGACGATTTC-AG...................................................................................................................................GACGATACTGAAAGAA-TCTGCCTCATCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E322109" ref_strand="+" ref_description="SGN-E322109 [cTOB-24-C13]">
      <seq>accaccgtcatgctccggtaccaatgtcacggtggtccaaggtgatcggaatacaaccgaactaccaatgagtattgacgctcttgacagtttcattcgccttaatttgggaaactggaccggctctttccatcaatttgatggtcatggaaatttgatgcatagaattacaacgaaacttgctgtgggctcttatggtgaaggtgaactgatgagtttattacaaacgttatacatcaaacaacctccatctaccacttcatgttctggcgatgattgtgagtcagagtggtttgagtacaaaatcaaagagaccaacatgtttaccgtcgacaaatatcaacagtttctgtttcttttcagattttattgcatttgaggtaccactaaaagtagtttgcagattggcttcttccccaaggaaaaggcatacgcactaagatatcagactgctggcatgttggagactgtgttaagacagggagtgctaggtgaagatgatatcggagaagaatcaccaagaaatctgaagcttccctctaaacgtccttctattgtatgtgaaaattgtctttattcactggagaaagataggcgagtgagagcatttcatataatggacccaaaaggagtactggaaatgcttcttgttttcctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="59292" stop="62225"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59592" g_stop="59724" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="133" r_length="133" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59725" i_stop="59914" i_length="190">
            <donor d_prob="0.196" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59915" g_stop="60009" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="134" r_stop="228" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="60010" i_stop="60743" i_length="734">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60744" g_stop="60861" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="229" r_stop="346" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="60862" i_stop="60935" i_length="74">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="60936" g_stop="61111" g_length="176"/>
          <reference_exon_boundary r_type="cDNA" r_start="347" r_stop="522" r_length="176" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="61112" i_stop="61789" i_length="678">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.762" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="61790" g_stop="61925" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="523" r_stop="658" r_length="136" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E322109" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>658</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E322109" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59592" e_stop="59724"/>
          <exon e_start="59915" e_stop="60009"/>
          <exon e_start="60744" e_stop="60861"/>
          <exon e_start="60936" e_stop="61111"/>
          <exon e_start="61790" e_stop="61925"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCATGTCAGGATCAACTCCGTTCCTCTTTCTCTCTTTCTGTGGATGCATTGTCTTATTTTTGTCTATAACTTTATTATTGATAAATACACGTATATTTATGAATTTTTGATAAATATTCATATCCTATAATTTTTAGTTTGAGGTGGAAACGTGCATGGATTTGATTCCTTCATCTGCTTGATTTATTTTGCAGCAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAACGTGAGCTCCTATAGTTAGATTCTTCCCTGTATTAATAATGTGTCTTAACCTTGCTATGTTTCCGATGAAAAGTAAGTTAAATAGATTAACTGTCCTTAACAATTTTGTAGCTTCTTCGGTGACTAATATGTGTAAAGTATATATGTTAGTTTATACATTCTAACTTTGAGAATGATCCAATCTAATTCTTTTTGTAATTGTGAAATTGCTAGTACTTATGTAATTAGTAATTTAATAAAATTAAAGGTAGTTGTTAGTTATCCGAAGTTAAAAAACTCTTTTGAGATTTAGGAAAAGTTAAATTAGAATTGAGGAGAAAACCATGGAAATTTCAATGTTTACACTTCATTTTACATGGTTATAGTTTAATGGTATGTAGGTGAACTTTAGGGAATACTTGGAAATCCAGGTGATCTCTTTTTCTTGTTTGTGAATTTTGAGAAATTTTCCATTTAGTGGCATGCTATATTTAAGTGCAAGTAGATTTTGTCAGCCCAAAGCTCAAATTCTTCCACTGTTTTAAATAAAGTTGAGTTTGGAGAATTTATTAAGGAGGCCAATGTCACACATGCATTTCTGATTCATAAGCCCCTTTAGTTTGCTTTTTTATCTGCATAGAATTAGTTAGCAGTGGACACCAATGTATAGGGTATTTTCATTAAATTTGGGTACTGTTATATGTGTTCACTTTATGGTCTGGGAAACAAGTCGACTAACCGGCTTCAAAATTGTAGGTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAAATCAAAGAGACCAACATGTTTACCGTCGACAAATATCAACAGGTGAGCTTCACTAAGACAGAGAACTAACTTATATCCCTTCGCTGGTCATACTTAATAAAGACTGTTATCTGCAGTTTCTGTTTCTTTTCAGATTTTATTGCATTTGAGGTACCACTAAAAGTAGTTTGCAGATTGGCTTCTTCCCCAAGGAAAAGGCATACGCACTAAGATATCAGACTGCTGGCATGTTGGAGACTGTGTTAAGACAGGGAGTGCTAGGTGAAGATGATATCGGAGAAGAATCACCAAGGTAAATGTTTCTTACGTGGAGATGAATCAGTCAAAATAAGTTAAAATATTAGATCTGATGAGATCAAAGGTTGAAATTATGCATATGTTTTGCTGCTAGCTTTATTTTGGAAATGCTACCCAGTATGACCTTAATGTTGCTGTTTGTCACTTTTCCCCTTGGCTCTGCTGTGTTCTGGTCTGTGTGCTGTTCTGGTCTGTGTGCTTATCGGTTATGTTTTCAAACATATTCAGTTTTCACCCTGTACTGAAACAAACCAAAAAGGCTAATGCCTAAGAATTTGAGTAAACAAATTCCAAAAGGCAAATAAGACAATCAATATGTAAAGAATCCTCTCATCATAGCAGTAATTAGTTCCCAACTTAAAAGATATCAACTCTGTAAAAGAATCTCACACAATTAAGCATTCATTAGTAGATCTTTCCTACTAACAAATAAATATTGGTGATCTTGGACATCTCATAAGCTTCATCAGATCAATTAACTTGCATATTATTGCTTCTGACTTTCATGTTAGAAATTATAGACAGTCTTTTAATATCCAATTGCAAAGGTTATGTAAATTGCACGGGATCTTTTCTCATGAATGACTGTTCATATTTTTTGATTAGCTTTATCTTTTGGTTCCTGGCTTTGAATTTCTTAGTATCATTCTATAATTCTTCTTTTCTTTCACAGAAATCTGAAGCTTCCCTCTAAACGTCCTTCTATTGTATGTGAAAATTGTCTTTATTCACTGGAGAAAGATAGGCGAGTGAGAGCATTTCATATAATGGACCCAAAAGGAGTACTGGAAATGCTTCTTGTTTTCCTT</genome_strand>
        <mrna_strand>ACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCAT..............................................................................................................................................................................................CAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAAATCAAAGAGACCAACATGTTTACCGTCGACAAATATCAACAG..........................................................................TTTCTGTTTCTTTTCAGATTTTATTGCATTTGAGGTACCACTAAAAGTAGTTTGCAGATTGGCTTCTTCCCCAAGGAAAAGGCATACGCACTAAGATATCAGACTGCTGGCATGTTGGAGACTGTGTTAAGACAGGGAGTGCTAGGTGAAGATGATATCGGAGAAGAATCACCAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATCTGAAGCTTCCCTCTAAACGTCCTTCTATTGTATGTGAAAATTGTCTTTATTCACTGGAGAAAGATAGGCGAGTGAGAGCATTTCATATAATGGACCCAAAAGGAGTACTGGAAATGCTTCTTGTTTTCCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E322233" ref_strand="+" ref_description="SGN-E322233 [cTOB-24-D16]">
      <seq>accaccgtcatgctccggtaccaatgtcacggtggtccaaggtgatcggaatacaaccgaactaccaatgagtattgacgctcttgacagtttcattcgccttaatttgggaaactggaccggctctttccatcaatttgatggtcatggaaatttgatgcatagaattacaacgaaacttgctgtgggctcttatggtgaaggtgaactgatgagtttattacaaacgttatacatcaaacaacctccatctaccacttcatgttctggcgatgattgtgagtcagagtggtttgagtacaaaatcaaagagaccaacatgtttaccgtcgacaaatatcaacagtttctgtttcttttcagattttattgcatttgaggtaccactaaaagtagtttgcagattggcttcttccccaaggaaaaggcatacgcactaagatatcagactgctggcatgttggagactgtgttaagacagggagtgctaggtgaagatgatatcggagaagaatcaccaagaaatctgaagcttccctctaaacgtccttctattgtatgtgaaaattgtctttattcactggagaaagataggcgagtgagagcatttcatataatggacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="59292" stop="62190"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59592" g_stop="59724" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="133" r_length="133" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59725" i_stop="59914" i_length="190">
            <donor d_prob="0.196" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59915" g_stop="60009" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="134" r_stop="228" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="60010" i_stop="60743" i_length="734">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60744" g_stop="60861" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="229" r_stop="346" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="60862" i_stop="60935" i_length="74">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="60936" g_stop="61111" g_length="176"/>
          <reference_exon_boundary r_type="cDNA" r_start="347" r_stop="522" r_length="176" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="61112" i_stop="61789" i_length="678">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.762" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="61790" g_stop="61890" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="523" r_stop="623" r_length="101" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E322233" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>623</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E322233" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59592" e_stop="59724"/>
          <exon e_start="59915" e_stop="60009"/>
          <exon e_start="60744" e_stop="60861"/>
          <exon e_start="60936" e_stop="61111"/>
          <exon e_start="61790" e_stop="61890"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCATGTCAGGATCAACTCCGTTCCTCTTTCTCTCTTTCTGTGGATGCATTGTCTTATTTTTGTCTATAACTTTATTATTGATAAATACACGTATATTTATGAATTTTTGATAAATATTCATATCCTATAATTTTTAGTTTGAGGTGGAAACGTGCATGGATTTGATTCCTTCATCTGCTTGATTTATTTTGCAGCAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAACGTGAGCTCCTATAGTTAGATTCTTCCCTGTATTAATAATGTGTCTTAACCTTGCTATGTTTCCGATGAAAAGTAAGTTAAATAGATTAACTGTCCTTAACAATTTTGTAGCTTCTTCGGTGACTAATATGTGTAAAGTATATATGTTAGTTTATACATTCTAACTTTGAGAATGATCCAATCTAATTCTTTTTGTAATTGTGAAATTGCTAGTACTTATGTAATTAGTAATTTAATAAAATTAAAGGTAGTTGTTAGTTATCCGAAGTTAAAAAACTCTTTTGAGATTTAGGAAAAGTTAAATTAGAATTGAGGAGAAAACCATGGAAATTTCAATGTTTACACTTCATTTTACATGGTTATAGTTTAATGGTATGTAGGTGAACTTTAGGGAATACTTGGAAATCCAGGTGATCTCTTTTTCTTGTTTGTGAATTTTGAGAAATTTTCCATTTAGTGGCATGCTATATTTAAGTGCAAGTAGATTTTGTCAGCCCAAAGCTCAAATTCTTCCACTGTTTTAAATAAAGTTGAGTTTGGAGAATTTATTAAGGAGGCCAATGTCACACATGCATTTCTGATTCATAAGCCCCTTTAGTTTGCTTTTTTATCTGCATAGAATTAGTTAGCAGTGGACACCAATGTATAGGGTATTTTCATTAAATTTGGGTACTGTTATATGTGTTCACTTTATGGTCTGGGAAACAAGTCGACTAACCGGCTTCAAAATTGTAGGTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAAATCAAAGAGACCAACATGTTTACCGTCGACAAATATCAACAGGTGAGCTTCACTAAGACAGAGAACTAACTTATATCCCTTCGCTGGTCATACTTAATAAAGACTGTTATCTGCAGTTTCTGTTTCTTTTCAGATTTTATTGCATTTGAGGTACCACTAAAAGTAGTTTGCAGATTGGCTTCTTCCCCAAGGAAAAGGCATACGCACTAAGATATCAGACTGCTGGCATGTTGGAGACTGTGTTAAGACAGGGAGTGCTAGGTGAAGATGATATCGGAGAAGAATCACCAAGGTAAATGTTTCTTACGTGGAGATGAATCAGTCAAAATAAGTTAAAATATTAGATCTGATGAGATCAAAGGTTGAAATTATGCATATGTTTTGCTGCTAGCTTTATTTTGGAAATGCTACCCAGTATGACCTTAATGTTGCTGTTTGTCACTTTTCCCCTTGGCTCTGCTGTGTTCTGGTCTGTGTGCTGTTCTGGTCTGTGTGCTTATCGGTTATGTTTTCAAACATATTCAGTTTTCACCCTGTACTGAAACAAACCAAAAAGGCTAATGCCTAAGAATTTGAGTAAACAAATTCCAAAAGGCAAATAAGACAATCAATATGTAAAGAATCCTCTCATCATAGCAGTAATTAGTTCCCAACTTAAAAGATATCAACTCTGTAAAAGAATCTCACACAATTAAGCATTCATTAGTAGATCTTTCCTACTAACAAATAAATATTGGTGATCTTGGACATCTCATAAGCTTCATCAGATCAATTAACTTGCATATTATTGCTTCTGACTTTCATGTTAGAAATTATAGACAGTCTTTTAATATCCAATTGCAAAGGTTATGTAAATTGCACGGGATCTTTTCTCATGAATGACTGTTCATATTTTTTGATTAGCTTTATCTTTTGGTTCCTGGCTTTGAATTTCTTAGTATCATTCTATAATTCTTCTTTTCTTTCACAGAAATCTGAAGCTTCCCTCTAAACGTCCTTCTATTGTATGTGAAAATTGTCTTTATTCACTGGAGAAAGATAGGCGAGTGAGAGCATTTCATATAATGGACC</genome_strand>
        <mrna_strand>ACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCAT..............................................................................................................................................................................................CAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAAATCAAAGAGACCAACATGTTTACCGTCGACAAATATCAACAG..........................................................................TTTCTGTTTCTTTTCAGATTTTATTGCATTTGAGGTACCACTAAAAGTAGTTTGCAGATTGGCTTCTTCCCCAAGGAAAAGGCATACGCACTAAGATATCAGACTGCTGGCATGTTGGAGACTGTGTTAAGACAGGGAGTGCTAGGTGAAGATGATATCGGAGAAGAATCACCAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATCTGAAGCTTCCCTCTAAACGTCCTTCTATTGTATGTGAAAATTGTCTTTATTCACTGGAGAAAGATAGGCGAGTGAGAGCATTTCATATAATGGACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E293349" ref_strand="+" ref_description="SGN-E293349 [cLET-18-M11]">
      <seq>tttaccgtcgacaaatatcaacagattggcttcttccccaaggaaaaggcatacgcactaagatatcagactgctggcatgttggagactgtgttaagacagggagtgctaggtgaagatgatatcggagaagaatcaccaagaaatctgaagcttccctctaaacgtccttctattgtatgtgaaaattgtctttattcactggagaaagataggcgagtgagagcatttcatataatggacccaaaaggagtactggaaatgcttcttgttttccttgaagaaagagggaacggagaggccattcctccctcctttgacgatttcaaggaggatactgaaagaattctgcctcatcttggaacttggaaaggtcattcgcgaacaacacgtactggtgtttatggagcaacaattactgaagcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="60538" stop="62504"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60838" g_stop="60861" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="24" r_length="24" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="60862" i_stop="60992" i_length="131">
            <donor d_prob="0.994" d_score="0.00"/>
            <acceptor a_prob="0.442" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="60993" g_stop="61111" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="25" r_stop="143" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="61112" i_stop="61789" i_length="678">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.762" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="61790" g_stop="61976" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="144" r_stop="330" r_length="187" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="61977" i_stop="62107" i_length="131">
            <donor d_prob="0.869" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62108" g_stop="62204" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="331" r_stop="427" r_length="97" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E293349" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>427</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E293349" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60838" e_stop="60861"/>
          <exon e_start="60993" e_stop="61111"/>
          <exon e_start="61790" e_stop="61976"/>
          <exon e_start="62108" e_stop="62204"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTACCGTCGACAAATATCAACAGGTGAGCTTCACTAAGACAGAGAACTAACTTATATCCCTTCGCTGGTCATACTTAATAAAGACTGTTATCTGCAGTTTCTGTTTCTTTTCAGATTTTATTGCATTTGAGGTACCACTAAAAGTAGTTTGCAGATTGGCTTCTTCCCCAAGGAAAAGGCATACGCACTAAGATATCAGACTGCTGGCATGTTGGAGACTGTGTTAAGACAGGGAGTGCTAGGTGAAGATGATATCGGAGAAGAATCACCAAGGTAAATGTTTCTTACGTGGAGATGAATCAGTCAAAATAAGTTAAAATATTAGATCTGATGAGATCAAAGGTTGAAATTATGCATATGTTTTGCTGCTAGCTTTATTTTGGAAATGCTACCCAGTATGACCTTAATGTTGCTGTTTGTCACTTTTCCCCTTGGCTCTGCTGTGTTCTGGTCTGTGTGCTGTTCTGGTCTGTGTGCTTATCGGTTATGTTTTCAAACATATTCAGTTTTCACCCTGTACTGAAACAAACCAAAAAGGCTAATGCCTAAGAATTTGAGTAAACAAATTCCAAAAGGCAAATAAGACAATCAATATGTAAAGAATCCTCTCATCATAGCAGTAATTAGTTCCCAACTTAAAAGATATCAACTCTGTAAAAGAATCTCACACAATTAAGCATTCATTAGTAGATCTTTCCTACTAACAAATAAATATTGGTGATCTTGGACATCTCATAAGCTTCATCAGATCAATTAACTTGCATATTATTGCTTCTGACTTTCATGTTAGAAATTATAGACAGTCTTTTAATATCCAATTGCAAAGGTTATGTAAATTGCACGGGATCTTTTCTCATGAATGACTGTTCATATTTTTTGATTAGCTTTATCTTTTGGTTCCTGGCTTTGAATTTCTTAGTATCATTCTATAATTCTTCTTTTCTTTCACAGAAATCTGAAGCTTCCCTCTAAACGTCCTTCTATTGTATGTGAAAATTGTCTTTATTCACTGGAGAAAGATAGGCGAGTGAGAGCATTTCATATAATGGACCCAAAAGGAGTACTGGAAATGCTTCTTGTTTTCCTTGAAGAAAGAGGGAACGGAGAGGCCATTCCTCCCTCCTTTGACGATTTCAAGGTAATTTTGACTTGAAAGGGGAAGGGTTGCCCTTCTATTCTTCGTTTGGACTACCTAAACATAGTTTGATTCAACATGTTAGTTACCAGAACCAAATGATTGTTCTTATGCATTCCATGGTCATCTTGTAGGAGGATACTGAAAGAATTCTGCCTCATCTTGGAACTTGGAAAGGTCATTCGCGAACAACACGTACTGGTGTTTATGGAGCAACAATTACTGAAGCAA</genome_strand>
        <mrna_strand>TTTACCGTCGACAAATATCAACAG...................................................................................................................................ATTGGCTTCTTCCCCAAGGAAAAGGCATACGCACTAAGATATCAGACTGCTGGCATGTTGGAGACTGTGTTAAGACAGGGAGTGCTAGGTGAAGATGATATCGGAGAAGAATCACCAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATCTGAAGCTTCCCTCTAAACGTCCTTCTATTGTATGTGAAAATTGTCTTTATTCACTGGAGAAAGATAGGCGAGTGAGAGCATTTCATATAATGGACCCAAAAGGAGTACTGGAAATGCTTCTTGTTTTCCTTGAAGAAAGAGGGAACGGAGAGGCCATTCCTCCCTCCTTTGACGATTTCAAG...................................................................................................................................GAGGATACTGAAAGAATTCTGCCTCATCTTGGAACTTGGAAAGGTCATTCGCGAACAACACGTACTGGTGTTTATGGAGCAACAATTACTGAAGCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E538188" ref_strand="+" ref_description="SGN-E538188 [TUS-57-D8]">
      <seq>caaatatcaacagattggcttcttccccaaggaaaaggcatacgcactaagatatcagactgctggcatgttggagactgtgttaagacagggagtgctaggtgaagatgatatcggagaagaatcaccaagaaatctgaagcttccctctaaacgtccttctattgtatgtgaaaattgtctttattcactggagaaagataggcgagtgagagcatttcatataatggacccaaaaggagtactggaaatgcttcttgttttccttgaagaaagagggaacggagaggccattcctccctcctttgacgatttcaaggaggatactgaaagaattctgcctcatcttggaacttggaaaggtcattcgcgaacaacacgtactggtgtttatggagcaacaattactgaagcaagtacaactgctgttcttgaaatcaacaaggacggccagctaattcaggatatcacgtctacttctggtgcgactaatattacaacaaatgtacattggaccggtaccatatccaataacctagtgacattcgacggtggtttccagcttactctgttgcctgggggcatttacatgggatacccatctgatgtggccaagaatgtgcaagaatccacagcatttcacgttgagttttgttggctagaatcgcctggcaagagacaaagacttatccgtacttacgatgtagagggctttgctgtttcatctacttatttcatcgagtccaaggtctgagttatttcccctgattcaaaaagatgtgcttcagacatcatatttgctcccgcatgaaccatttttcctgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="60690" stop="63294"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60849" g_stop="60861" g_length="13"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="13" r_length="13" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="60862" i_stop="60992" i_length="131">
            <donor d_prob="0.994" d_score="0.00"/>
            <acceptor a_prob="0.442" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="60993" g_stop="61111" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="14" r_stop="132" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="61112" i_stop="61789" i_length="678">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.762" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="61790" g_stop="61976" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="133" r_stop="319" r_length="187" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="61977" i_stop="62107" i_length="131">
            <donor d_prob="0.869" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62108" g_stop="62251" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="320" r_stop="463" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="62252" i_stop="62632" i_length="381">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.281" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="62633" g_stop="62994" g_length="362"/>
          <reference_exon_boundary r_type="cDNA" r_start="464" r_stop="825" r_length="362" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E538188" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>825</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E538188" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60849" e_stop="60861"/>
          <exon e_start="60993" e_stop="61111"/>
          <exon e_start="61790" e_stop="61976"/>
          <exon e_start="62108" e_stop="62251"/>
          <exon e_start="62633" e_stop="62994"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAATATCAACAGGTGAGCTTCACTAAGACAGAGAACTAACTTATATCCCTTCGCTGGTCATACTTAATAAAGACTGTTATCTGCAGTTTCTGTTTCTTTTCAGATTTTATTGCATTTGAGGTACCACTAAAAGTAGTTTGCAGATTGGCTTCTTCCCCAAGGAAAAGGCATACGCACTAAGATATCAGACTGCTGGCATGTTGGAGACTGTGTTAAGACAGGGAGTGCTAGGTGAAGATGATATCGGAGAAGAATCACCAAGGTAAATGTTTCTTACGTGGAGATGAATCAGTCAAAATAAGTTAAAATATTAGATCTGATGAGATCAAAGGTTGAAATTATGCATATGTTTTGCTGCTAGCTTTATTTTGGAAATGCTACCCAGTATGACCTTAATGTTGCTGTTTGTCACTTTTCCCCTTGGCTCTGCTGTGTTCTGGTCTGTGTGCTGTTCTGGTCTGTGTGCTTATCGGTTATGTTTTCAAACATATTCAGTTTTCACCCTGTACTGAAACAAACCAAAAAGGCTAATGCCTAAGAATTTGAGTAAACAAATTCCAAAAGGCAAATAAGACAATCAATATGTAAAGAATCCTCTCATCATAGCAGTAATTAGTTCCCAACTTAAAAGATATCAACTCTGTAAAAGAATCTCACACAATTAAGCATTCATTAGTAGATCTTTCCTACTAACAAATAAATATTGGTGATCTTGGACATCTCATAAGCTTCATCAGATCAATTAACTTGCATATTATTGCTTCTGACTTTCATGTTAGAAATTATAGACAGTCTTTTAATATCCAATTGCAAAGGTTATGTAAATTGCACGGGATCTTTTCTCATGAATGACTGTTCATATTTTTTGATTAGCTTTATCTTTTGGTTCCTGGCTTTGAATTTCTTAGTATCATTCTATAATTCTTCTTTTCTTTCACAGAAATCTGAAGCTTCCCTCTAAACGTCCTTCTATTGTATGTGAAAATTGTCTTTATTCACTGGAGAAAGATAGGCGAGTGAGAGCATTTCATATAATGGACCCAAAAGGAGTACTGGAAATGCTTCTTGTTTTCCTTGAAGAAAGAGGGAACGGAGAGGCCATTCCTCCCTCCTTTGACGATTTCAAGGTAATTTTGACTTGAAAGGGGAAGGGTTGCCCTTCTATTCTTCGTTTGGACTACCTAAACATAGTTTGATTCAACATGTTAGTTACCAGAACCAAATGATTGTTCTTATGCATTCCATGGTCATCTTGTAGGAGGATACTGAAAGAATTCTGCCTCATCTTGGAACTTGGAAAGGTCATTCGCGAACAACACGTACTGGTGTTTATGGAGCAACAATTACTGAAGCAAGTACAACTGCTGTTCTTGAAATCAACAAGGACGGCCAGCTAATTCAGGTTTGTTAGCTCCTTGCAATCAGTTCCTTGTATCAGATAGTTTAGTAATGGTGAACTACTAGTATCCACGAAAGGGGTCATCTGCCCAGTGACACTTGGATAGTAAATGGAATCTCTCTTTCATGCAACTTCTTTGAGAAATGAATTTGAAATAGTTCAATGTTATGATGAATTAGCCGTCTGGATGGATCCTCAGCTATATAGGAAACACAAATGCATTGGTAGAATGGAGTTGTCACCACAAAATTAGCTCAAATATGGGAGGGTGGGGAAAGTTGTGATCTTCTCATTTTTCTTTCTTTCTTTATTTATTTCAGGCACTGAAATGAATATATTTGGTTTCAGCTTTTGGTTGCTAATATATTTCCTTCTTAAATCAAGGATATCACGTCTACTTCTGGTGCGACTAATATTACAACAAATGTACATTGGACCGGTACCATATCCAATAACCTAGTGACATTCGACGGTGGTTTCCAGCTTACTCTGTTGCCTGGGGGCATTTACATGGGATACCCATCTGATGTGGCCAAGAATGTGCAAGAATCCACAGCATTTCACGTTGAGTTTTGTTGGCTAGAATCGCCTGGCAAGAGACAAAGACTTATCCGTACTTACGATGTAGAGGGCTTTGCTGTTTCATCTACTTATTTCATCGAGTCCAAGGTCTGAGTTATTTCCCCTGATTCAAAAAGATGTGCTTCAGACATCATATTTGCTCCCGCATGAACCATTTTTCCTGG</genome_strand>
        <mrna_strand>CAAATATCAACAG...................................................................................................................................ATTGGCTTCTTCCCCAAGGAAAAGGCATACGCACTAAGATATCAGACTGCTGGCATGTTGGAGACTGTGTTAAGACAGGGAGTGCTAGGTGAAGATGATATCGGAGAAGAATCACCAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATCTGAAGCTTCCCTCTAAACGTCCTTCTATTGTATGTGAAAATTGTCTTTATTCACTGGAGAAAGATAGGCGAGTGAGAGCATTTCATATAATGGACCCAAAAGGAGTACTGGAAATGCTTCTTGTTTTCCTTGAAGAAAGAGGGAACGGAGAGGCCATTCCTCCCTCCTTTGACGATTTCAAG...................................................................................................................................GAGGATACTGAAAGAATTCTGCCTCATCTTGGAACTTGGAAAGGTCATTCGCGAACAACACGTACTGGTGTTTATGGAGCAACAATTACTGAAGCAAGTACAACTGCTGTTCTTGAAATCAACAAGGACGGCCAGCTAATTCAG.............................................................................................................................................................................................................................................................................................................................................................................................GATATCACGTCTACTTCTGGTGCGACTAATATTACAACAAATGTACATTGGACCGGTACCATATCCAATAACCTAGTGACATTCGACGGTGGTTTCCAGCTTACTCTGTTGCCTGGGGGCATTTACATGGGATACCCATCTGATGTGGCCAAGAATGTGCAAGAATCCACAGCATTTCACGTTGAGTTTTGTTGGCTAGAATCGCCTGGCAAGAGACAAAGACTTATCCGTACTTACGATGTAGAGGGCTTTGCTGTTTCATCTACTTATTTCATCGAGTCCAAGGTCTGAGTTATTTCCCCTGATTCAAAAAGATGTGCTTCAGACATCATATTTGCTCCCGCATGAACCATTTTTCCTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E209186" ref_strand="+" ref_description="SGN-E209186 [cLEC-38-D4]">
      <seq>ttcttttcagattttattgcatttgaggtaccactaaaagtagtttgcagattggcttcttccccaaggaaaaggcatacgcactaagatatcagactgctggcatgttggagactgtgttaagacagggagtgctaggtgaagatgatatcggagaagaatcaccaagaaatctgaagcttccctctaaacgtccttctattgtatgtgaaaattgtctttattcactggagaaagataggcgagtgagagcatttcatataatggacccaaaaggagtactggaaatgcttcttgttttccttgaagaaagagggaacggagaggccattcctccctcctttgacgatttcaaggaggatactgaaagaattctgcctcatcttggaacttggaaaggtcattcgcgaacaacacg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="60643" stop="62469"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60943" g_stop="61111" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="169" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="61112" i_stop="61789" i_length="678">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.762" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="61790" g_stop="61976" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="170" r_stop="356" r_length="187" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="61977" i_stop="62107" i_length="131">
            <donor d_prob="0.869" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62108" g_stop="62169" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="357" r_stop="418" r_length="62" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E209186" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>418</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E209186" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60943" e_stop="61111"/>
          <exon e_start="61790" e_stop="61976"/>
          <exon e_start="62108" e_stop="62169"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTTTTCAGATTTTATTGCATTTGAGGTACCACTAAAAGTAGTTTGCAGATTGGCTTCTTCCCCAAGGAAAAGGCATACGCACTAAGATATCAGACTGCTGGCATGTTGGAGACTGTGTTAAGACAGGGAGTGCTAGGTGAAGATGATATCGGAGAAGAATCACCAAGGTAAATGTTTCTTACGTGGAGATGAATCAGTCAAAATAAGTTAAAATATTAGATCTGATGAGATCAAAGGTTGAAATTATGCATATGTTTTGCTGCTAGCTTTATTTTGGAAATGCTACCCAGTATGACCTTAATGTTGCTGTTTGTCACTTTTCCCCTTGGCTCTGCTGTGTTCTGGTCTGTGTGCTGTTCTGGTCTGTGTGCTTATCGGTTATGTTTTCAAACATATTCAGTTTTCACCCTGTACTGAAACAAACCAAAAAGGCTAATGCCTAAGAATTTGAGTAAACAAATTCCAAAAGGCAAATAAGACAATCAATATGTAAAGAATCCTCTCATCATAGCAGTAATTAGTTCCCAACTTAAAAGATATCAACTCTGTAAAAGAATCTCACACAATTAAGCATTCATTAGTAGATCTTTCCTACTAACAAATAAATATTGGTGATCTTGGACATCTCATAAGCTTCATCAGATCAATTAACTTGCATATTATTGCTTCTGACTTTCATGTTAGAAATTATAGACAGTCTTTTAATATCCAATTGCAAAGGTTATGTAAATTGCACGGGATCTTTTCTCATGAATGACTGTTCATATTTTTTGATTAGCTTTATCTTTTGGTTCCTGGCTTTGAATTTCTTAGTATCATTCTATAATTCTTCTTTTCTTTCACAGAAATCTGAAGCTTCCCTCTAAACGTCCTTCTATTGTATGTGAAAATTGTCTTTATTCACTGGAGAAAGATAGGCGAGTGAGAGCATTTCATATAATGGACCCAAAAGGAGTACTGGAAATGCTTCTTGTTTTCCTTGAAGAAAGAGGGAACGGAGAGGCCATTCCTCCCTCCTTTGACGATTTCAAGGTAATTTTGACTTGAAAGGGGAAGGGTTGCCCTTCTATTCTTCGTTTGGACTACCTAAACATAGTTTGATTCAACATGTTAGTTACCAGAACCAAATGATTGTTCTTATGCATTCCATGGTCATCTTGTAGGAGGATACTGAAAGAATTCTGCCTCATCTTGGAACTTGGAAAGGTCATTCGCGAACAACACG</genome_strand>
        <mrna_strand>TTCTTTTCAGATTTTATTGCATTTGAGGTACCACTAAAAGTAGTTTGCAGATTGGCTTCTTCCCCAAGGAAAAGGCATACGCACTAAGATATCAGACTGCTGGCATGTTGGAGACTGTGTTAAGACAGGGAGTGCTAGGTGAAGATGATATCGGAGAAGAATCACCAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATCTGAAGCTTCCCTCTAAACGTCCTTCTATTGTATGTGAAAATTGTCTTTATTCACTGGAGAAAGATAGGCGAGTGAGAGCATTTCATATAATGGACCCAAAAGGAGTACTGGAAATGCTTCTTGTTTTCCTTGAAGAAAGAGGGAACGGAGAGGCCATTCCTCCCTCCTTTGACGATTTCAAG...................................................................................................................................GAGGATACTGAAAGAATTCTGCCTCATCTTGGAACTTGGAAAGGTCATTCGCGAACAACACG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E319590" ref_strand="+" ref_description="SGN-E319590 [cTOB-15-J6]">
      <seq>tggcatgttggagactgtgttaagacagggagtgctaggtgaagatgatatcggagaagaatcaccaagaaatctgaagcttccctctaaacgtccttctattgtatgtgaaaattgtctttattcactggagaaagataggcgagtgagagcatttcatataatggacccaaaaggagtactggaaatgcttcttgttttccttgaagaaagagggaacggagaggccattcctccctcctttgacgatttcaaggaggatactgaaagaattctgcctcatcttggaacttggaaaggtcattcgcgaacaacacgtactggtgtttatggagcaacaattactgaagcaagtacaactgctgttcttgaaatcaacaaggacggccagctaattcaggatatcacgtctacttctggtgcgactaatattacaacaaatgtacattggaccggtaccatatccaataacctagtgacattcgacggtggtttccagcttactctgttgcctgggggcatttacatgggatacccatctgatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="60743" stop="63078"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61043" g_stop="61111" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="69" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="61112" i_stop="61789" i_length="678">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.762" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="61790" g_stop="61976" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="70" r_stop="256" r_length="187" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="61977" i_stop="62107" i_length="131">
            <donor d_prob="0.869" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62108" g_stop="62251" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="257" r_stop="400" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62252" i_stop="62632" i_length="381">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.281" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62633" g_stop="62778" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="401" r_stop="546" r_length="146" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E319590" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>546</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E319590" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61043" e_stop="61111"/>
          <exon e_start="61790" e_stop="61976"/>
          <exon e_start="62108" e_stop="62251"/>
          <exon e_start="62633" e_stop="62778"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGCATGTTGGAGACTGTGTTAAGACAGGGAGTGCTAGGTGAAGATGATATCGGAGAAGAATCACCAAGGTAAATGTTTCTTACGTGGAGATGAATCAGTCAAAATAAGTTAAAATATTAGATCTGATGAGATCAAAGGTTGAAATTATGCATATGTTTTGCTGCTAGCTTTATTTTGGAAATGCTACCCAGTATGACCTTAATGTTGCTGTTTGTCACTTTTCCCCTTGGCTCTGCTGTGTTCTGGTCTGTGTGCTGTTCTGGTCTGTGTGCTTATCGGTTATGTTTTCAAACATATTCAGTTTTCACCCTGTACTGAAACAAACCAAAAAGGCTAATGCCTAAGAATTTGAGTAAACAAATTCCAAAAGGCAAATAAGACAATCAATATGTAAAGAATCCTCTCATCATAGCAGTAATTAGTTCCCAACTTAAAAGATATCAACTCTGTAAAAGAATCTCACACAATTAAGCATTCATTAGTAGATCTTTCCTACTAACAAATAAATATTGGTGATCTTGGACATCTCATAAGCTTCATCAGATCAATTAACTTGCATATTATTGCTTCTGACTTTCATGTTAGAAATTATAGACAGTCTTTTAATATCCAATTGCAAAGGTTATGTAAATTGCACGGGATCTTTTCTCATGAATGACTGTTCATATTTTTTGATTAGCTTTATCTTTTGGTTCCTGGCTTTGAATTTCTTAGTATCATTCTATAATTCTTCTTTTCTTTCACAGAAATCTGAAGCTTCCCTCTAAACGTCCTTCTATTGTATGTGAAAATTGTCTTTATTCACTGGAGAAAGATAGGCGAGTGAGAGCATTTCATATAATGGACCCAAAAGGAGTACTGGAAATGCTTCTTGTTTTCCTTGAAGAAAGAGGGAACGGAGAGGCCATTCCTCCCTCCTTTGACGATTTCAAGGTAATTTTGACTTGAAAGGGGAAGGGTTGCCCTTCTATTCTTCGTTTGGACTACCTAAACATAGTTTGATTCAACATGTTAGTTACCAGAACCAAATGATTGTTCTTATGCATTCCATGGTCATCTTGTAGGAGGATACTGAAAGAATTCTGCCTCATCTTGGAACTTGGAAAGGTCATTCGCGAACAACACGTACTGGTGTTTATGGAGCAACAATTACTGAAGCAAGTACAACTGCTGTTCTTGAAATCAACAAGGACGGCCAGCTAATTCAGGTTTGTTAGCTCCTTGCAATCAGTTCCTTGTATCAGATAGTTTAGTAATGGTGAACTACTAGTATCCACGAAAGGGGTCATCTGCCCAGTGACACTTGGATAGTAAATGGAATCTCTCTTTCATGCAACTTCTTTGAGAAATGAATTTGAAATAGTTCAATGTTATGATGAATTAGCCGTCTGGATGGATCCTCAGCTATATAGGAAACACAAATGCATTGGTAGAATGGAGTTGTCACCACAAAATTAGCTCAAATATGGGAGGGTGGGGAAAGTTGTGATCTTCTCATTTTTCTTTCTTTCTTTATTTATTTCAGGCACTGAAATGAATATATTTGGTTTCAGCTTTTGGTTGCTAATATATTTCCTTCTTAAATCAAGGATATCACGTCTACTTCTGGTGCGACTAATATTACAACAAATGTACATTGGACCGGTACCATATCCAATAACCTAGTGACATTCGACGGTGGTTTCCAGCTTACTCTGTTGCCTGGGGGCATTTACATGGGATACCCATCTGATGT</genome_strand>
        <mrna_strand>TGGCATGTTGGAGACTGTGTTAAGACAGGGAGTGCTAGGTGAAGATGATATCGGAGAAGAATCACCAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATCTGAAGCTTCCCTCTAAACGTCCTTCTATTGTATGTGAAAATTGTCTTTATTCACTGGAGAAAGATAGGCGAGTGAGAGCATTTCATATAATGGACCCAAAAGGAGTACTGGAAATGCTTCTTGTTTTCCTTGAAGAAAGAGGGAACGGAGAGGCCATTCCTCCCTCCTTTGACGATTTCAAG...................................................................................................................................GAGGATACTGAAAGAATTCTGCCTCATCTTGGAACTTGGAAAGGTCATTCGCGAACAACACGTACTGGTGTTTATGGAGCAACAATTACTGAAGCAAGTACAACTGCTGTTCTTGAAATCAACAAGGACGGCCAGCTAATTCAG.............................................................................................................................................................................................................................................................................................................................................................................................GATATCACGTCTACTTCTGGTGCGACTAATATTACAACAAATGTACATTGGACCGGTACCATATCCAATAACCTAGTGACATTCGACGGTGGTTTCCAGCTTACTCTGTTGCCTGGGGGCATTTACATGGGATACCCATCTGATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E228387" ref_strand="+" ref_description="SGN-E228387 [cLED-3-B22]">
      <seq>taggtgaagatgatatcggagaagaatcaccaagaaatctgaagcttccctctaaacgtccttctattgtatgtgaaaattgtctttattcactggagaaagatgggcgagtgagagcatttcatataatggacccaaaaggagtactggaaatgcttcttgatttccttgaagaaagagggaacggctaggccattcctccctcctttggcgattccaaggaggatactgaacgatttctgcctggtcttggaactcggaaaggtcattcgcgagcaacacgtactggggtatatggagcaacaattactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="60778" stop="62498"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61078" g_stop="61111" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="34" r_length="34" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="61112" i_stop="61789" i_length="678">
            <donor d_prob="0.997" d_score="0.00"/>
            <acceptor a_prob="0.762" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="61790" g_stop="61976" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="35" r_stop="221" r_length="187" r_score="0.968"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="61977" i_stop="62107" i_length="131">
            <donor d_prob="0.869" d_score="0.92"/>
            <acceptor a_prob="0.974" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62108" g_stop="62198" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="222" r_stop="312" r_length="91" r_score="0.912"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E228387" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>312</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E228387" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61078" e_stop="61111"/>
          <exon e_start="61790" e_stop="61976"/>
          <exon e_start="62108" e_stop="62198"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGGTGAAGATGATATCGGAGAAGAATCACCAAGGTAAATGTTTCTTACGTGGAGATGAATCAGTCAAAATAAGTTAAAATATTAGATCTGATGAGATCAAAGGTTGAAATTATGCATATGTTTTGCTGCTAGCTTTATTTTGGAAATGCTACCCAGTATGACCTTAATGTTGCTGTTTGTCACTTTTCCCCTTGGCTCTGCTGTGTTCTGGTCTGTGTGCTGTTCTGGTCTGTGTGCTTATCGGTTATGTTTTCAAACATATTCAGTTTTCACCCTGTACTGAAACAAACCAAAAAGGCTAATGCCTAAGAATTTGAGTAAACAAATTCCAAAAGGCAAATAAGACAATCAATATGTAAAGAATCCTCTCATCATAGCAGTAATTAGTTCCCAACTTAAAAGATATCAACTCTGTAAAAGAATCTCACACAATTAAGCATTCATTAGTAGATCTTTCCTACTAACAAATAAATATTGGTGATCTTGGACATCTCATAAGCTTCATCAGATCAATTAACTTGCATATTATTGCTTCTGACTTTCATGTTAGAAATTATAGACAGTCTTTTAATATCCAATTGCAAAGGTTATGTAAATTGCACGGGATCTTTTCTCATGAATGACTGTTCATATTTTTTGATTAGCTTTATCTTTTGGTTCCTGGCTTTGAATTTCTTAGTATCATTCTATAATTCTTCTTTTCTTTCACAGAAATCTGAAGCTTCCCTCTAAACGTCCTTCTATTGTATGTGAAAATTGTCTTTATTCACTGGAGAAAGATAGGCGAGTGAGAGCATTTCATATAATGGACCCAAAAGGAGTACTGGAAATGCTTCTTGTTTTCCTTGAAGAAAGAGGGAACGGAGAGGCCATTCCTCCCTCCTTTGACGATTTCAAGGTAATTTTGACTTGAAAGGGGAAGGGTTGCCCTTCTATTCTTCGTTTGGACTACCTAAACATAGTTTGATTCAACATGTTAGTTACCAGAACCAAATGATTGTTCTTATGCATTCCATGGTCATCTTGTAGGAGGATACTGAAAGAATTCTGCCTCATCTTGGAACTTGGAAAGGTCATTCGCGAACAACACGTACTGGTGTTTATGGAGCAACAATTACTG</genome_strand>
        <mrna_strand>TAGGTGAAGATGATATCGGAGAAGAATCACCAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATCTGAAGCTTCCCTCTAAACGTCCTTCTATTGTATGTGAAAATTGTCTTTATTCACTGGAGAAAGATGGGCGAGTGAGAGCATTTCATATAATGGACCCAAAAGGAGTACTGGAAATGCTTCTTGATTTCCTTGAAGAAAGAGGGAACGGCTAGGCCATTCCTCCCTCCTTTGGCGATTCCAAG...................................................................................................................................GAGGATACTGAACGATTTCTGCCTGGTCTTGGAACTCGGAAAGGTCATTCGCGAGCAACACGTACTGGGGTATATGGAGCAACAATTACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E276022" ref_strand="+" ref_description="SGN-E276022 [cLEN-12-I13]">
      <seq>gaaatctgaagcttccctctaaacgtccttctattgtatgtgaaaattgtctttattcactggagaaagataggcgagtgagagcatttcatataatggacccaaaaggagtactggaaatgcttcttgttttccttgaagaaagagggaacggagaggccattcctccctcctttgacgatttcaaggaggatactgaaagaattctgcctcatcttggaacttggaaaggtcattcgcgaacaacacgtactggtgtttatggagcaacaattactgaagcaagtacaactgctgttcttgaaatcaacaaggacggccagctaattcaggatatcacgtctacttctggtgcgactaatattacaacaaatgtacattggaccggtaccatatccaataacctagtgacattcgacggtggtttccagcttactctgttgcctgggggcatttacatgggatacccatctgatgtggccaagaatgtgcaagaatccacagcatttcacgttgagttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="61489" stop="63121"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61789" g_stop="61976" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="188" r_length="188" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="61977" i_stop="62107" i_length="131">
            <donor d_prob="0.869" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62108" g_stop="62251" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="189" r_stop="332" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="62252" i_stop="62632" i_length="381">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.281" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62633" g_stop="62821" g_length="189"/>
          <reference_exon_boundary r_type="cDNA" r_start="333" r_stop="521" r_length="189" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E276022" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>521</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E276022" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61789" e_stop="61976"/>
          <exon e_start="62108" e_stop="62251"/>
          <exon e_start="62633" e_stop="62821"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAATCTGAAGCTTCCCTCTAAACGTCCTTCTATTGTATGTGAAAATTGTCTTTATTCACTGGAGAAAGATAGGCGAGTGAGAGCATTTCATATAATGGACCCAAAAGGAGTACTGGAAATGCTTCTTGTTTTCCTTGAAGAAAGAGGGAACGGAGAGGCCATTCCTCCCTCCTTTGACGATTTCAAGGTAATTTTGACTTGAAAGGGGAAGGGTTGCCCTTCTATTCTTCGTTTGGACTACCTAAACATAGTTTGATTCAACATGTTAGTTACCAGAACCAAATGATTGTTCTTATGCATTCCATGGTCATCTTGTAGGAGGATACTGAAAGAATTCTGCCTCATCTTGGAACTTGGAAAGGTCATTCGCGAACAACACGTACTGGTGTTTATGGAGCAACAATTACTGAAGCAAGTACAACTGCTGTTCTTGAAATCAACAAGGACGGCCAGCTAATTCAGGTTTGTTAGCTCCTTGCAATCAGTTCCTTGTATCAGATAGTTTAGTAATGGTGAACTACTAGTATCCACGAAAGGGGTCATCTGCCCAGTGACACTTGGATAGTAAATGGAATCTCTCTTTCATGCAACTTCTTTGAGAAATGAATTTGAAATAGTTCAATGTTATGATGAATTAGCCGTCTGGATGGATCCTCAGCTATATAGGAAACACAAATGCATTGGTAGAATGGAGTTGTCACCACAAAATTAGCTCAAATATGGGAGGGTGGGGAAAGTTGTGATCTTCTCATTTTTCTTTCTTTCTTTATTTATTTCAGGCACTGAAATGAATATATTTGGTTTCAGCTTTTGGTTGCTAATATATTTCCTTCTTAAATCAAGGATATCACGTCTACTTCTGGTGCGACTAATATTACAACAAATGTACATTGGACCGGTACCATATCCAATAACCTAGTGACATTCGACGGTGGTTTCCAGCTTACTCTGTTGCCTGGGGGCATTTACATGGGATACCCATCTGATGTGGCCAAGAATGTGCAAGAATCCACAGCATTTCACGTTGAGTTT</genome_strand>
        <mrna_strand>GAAATCTGAAGCTTCCCTCTAAACGTCCTTCTATTGTATGTGAAAATTGTCTTTATTCACTGGAGAAAGATAGGCGAGTGAGAGCATTTCATATAATGGACCCAAAAGGAGTACTGGAAATGCTTCTTGTTTTCCTTGAAGAAAGAGGGAACGGAGAGGCCATTCCTCCCTCCTTTGACGATTTCAAG...................................................................................................................................GAGGATACTGAAAGAATTCTGCCTCATCTTGGAACTTGGAAAGGTCATTCGCGAACAACACGTACTGGTGTTTATGGAGCAACAATTACTGAAGCAAGTACAACTGCTGTTCTTGAAATCAACAAGGACGGCCAGCTAATTCAG.............................................................................................................................................................................................................................................................................................................................................................................................GATATCACGTCTACTTCTGGTGCGACTAATATTACAACAAATGTACATTGGACCGGTACCATATCCAATAACCTAGTGACATTCGACGGTGGTTTCCAGCTTACTCTGTTGCCTGGGGGCATTTACATGGGATACCCATCTGATGTGGCCAAGAATGTGCAAGAATCCACAGCATTTCACGTTGAGTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E538185" ref_strand="+" ref_description="SGN-E538185 [TUS-57-D8](-)">
      <seq>ccaaaaggagtactggaaatgcttcttgttttccttgaagaaagagggaacggagaggccattcctccctcctttgacgatttcaaggaggatactgaaagaattctgcctcatcttggaacttggaaaggtcattcgcgaacaacacgtactggtgtttatggagcaacaattactgaagcaagtacaactgctgttcttgaaatcaacaaggacggccagctaattcaggatatcacgtctacttctggtgcgactaatattacaacaaatgtacattggaccggtaccatatccaataacctagtgacattcgacggtggtttccagcttactctgttgcctgggggcatttacatgggatacccatctgatgtggccaagaatgtgcaagaatccacagcatttcacgttgagttttgttggctagaatcgcctggcaagagacaaagacttatccgtacttacgatgtagagggctttgctgtttcatctacttatttcatcgagtccaaggtctgagttatttcccctgattcaaaaagatgtgcttcagacatcatatttgctcccgcatgaaccatttttcctgggtacaatcacccaacactgtagtatcaattgtatctatctatctatatatctgtttttatatatagaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaagaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="61590" stop="63364"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61890" g_stop="61976" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="87" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="61977" i_stop="62107" i_length="131">
            <donor d_prob="0.869" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62108" g_stop="62251" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="88" r_stop="231" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="62252" i_stop="62632" i_length="381">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.281" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62633" g_stop="63060" g_length="428"/>
          <reference_exon_boundary r_type="cDNA" r_start="232" r_stop="660" r_length="429" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="661" polyA_stop="697"/>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E538185" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>659</cumulative_length_of_scored_exons>
        <coverage percentage="0.945" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E538185" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61890" e_stop="61976"/>
          <exon e_start="62108" e_stop="62251"/>
          <exon e_start="62633" e_stop="63060"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAAAAGGAGTACTGGAAATGCTTCTTGTTTTCCTTGAAGAAAGAGGGAACGGAGAGGCCATTCCTCCCTCCTTTGACGATTTCAAGGTAATTTTGACTTGAAAGGGGAAGGGTTGCCCTTCTATTCTTCGTTTGGACTACCTAAACATAGTTTGATTCAACATGTTAGTTACCAGAACCAAATGATTGTTCTTATGCATTCCATGGTCATCTTGTAGGAGGATACTGAAAGAATTCTGCCTCATCTTGGAACTTGGAAAGGTCATTCGCGAACAACACGTACTGGTGTTTATGGAGCAACAATTACTGAAGCAAGTACAACTGCTGTTCTTGAAATCAACAAGGACGGCCAGCTAATTCAGGTTTGTTAGCTCCTTGCAATCAGTTCCTTGTATCAGATAGTTTAGTAATGGTGAACTACTAGTATCCACGAAAGGGGTCATCTGCCCAGTGACACTTGGATAGTAAATGGAATCTCTCTTTCATGCAACTTCTTTGAGAAATGAATTTGAAATAGTTCAATGTTATGATGAATTAGCCGTCTGGATGGATCCTCAGCTATATAGGAAACACAAATGCATTGGTAGAATGGAGTTGTCACCACAAAATTAGCTCAAATATGGGAGGGTGGGGAAAGTTGTGATCTTCTCATTTTTCTTTCTTTCTTTATTTATTTCAGGCACTGAAATGAATATATTTGGTTTCAGCTTTTGGTTGCTAATATATTTCCTTCTTAAATCAAGGATATCACGTCTACTTCTGGTGCGACTAATATTACAACAAATGTACATTGGACCGGTACCATATCCAATAACCTAGTGACATTCGACGGTGGTTTCCAGCTTACTCTGTTGCCTGGGGGCATTTACATGGGATACCCATCTGATGTGGCCAAGAATGTGCAAGAATCCACAGCATTTCACGTTGAGTTTTGTTGGCTAGAATCGCCTGGCAAGAGACAAAGACTTATCCGTACTTACGATGTAGAGGGCTTTGCTGTTTCATCTACTTATTTCATCGAGTCCAAGGTCTGAGTTATTTCCCCTGATTCAAAAAGATGTGCTTCAGACATCATATTTGCTCCCGCATGAACCATTTTTCCTGGGTACAATCA-CCAACACTGTAGTATCAATTGTATCTATCTATCTATATATCTGTTTTTATATATAGA</genome_strand>
        <mrna_strand>CCAAAAGGAGTACTGGAAATGCTTCTTGTTTTCCTTGAAGAAAGAGGGAACGGAGAGGCCATTCCTCCCTCCTTTGACGATTTCAAG...................................................................................................................................GAGGATACTGAAAGAATTCTGCCTCATCTTGGAACTTGGAAAGGTCATTCGCGAACAACACGTACTGGTGTTTATGGAGCAACAATTACTGAAGCAAGTACAACTGCTGTTCTTGAAATCAACAAGGACGGCCAGCTAATTCAG.............................................................................................................................................................................................................................................................................................................................................................................................GATATCACGTCTACTTCTGGTGCGACTAATATTACAACAAATGTACATTGGACCGGTACCATATCCAATAACCTAGTGACATTCGACGGTGGTTTCCAGCTTACTCTGTTGCCTGGGGGCATTTACATGGGATACCCATCTGATGTGGCCAAGAATGTGCAAGAATCCACAGCATTTCACGTTGAGTTTTGTTGGCTAGAATCGCCTGGCAAGAGACAAAGACTTATCCGTACTTACGATGTAGAGGGCTTTGCTGTTTCATCTACTTATTTCATCGAGTCCAAGGTCTGAGTTATTTCCCCTGATTCAAAAAGATGTGCTTCAGACATCATATTTGCTCCCGCATGAACCATTTTTCCTGGGTACAATCACCCAACACTGTAGTATCAATTGTATCTATCTATCTATATATCTGTTTTTATATATAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E379407" ref_strand="+" ref_description="SGN-E379407 [TUS-3-B10](-)">
      <seq>tgcgactaatattacaacaaatgtacattggaccggtaccatatccaataacctagtgacattcgacggtggtttccagcttactctgttgcctgggggcatttacatgggatacccatctgatgtggccaagaatgtgcaagaatccacagcatttcacgttgagttttgttggctagaatcgcctggcaagagacaaagacttatccgtacttacgatgtagagggctttgctgtttcatctacttatttcatcgagtccaaggtctgagttatttcccctgattcaaaaagatgtgcttcagacatcatatttgctcccgcatgaaccgtttttcctgggtacaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="62353" stop="63301"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62653" g_stop="63001" g_length="349"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="349" r_length="349" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E379407" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>349</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E379407" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62653" e_stop="63001"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCGACTAATATTACAACAAATGTACATTGGACCGGTACCATATCCAATAACCTAGTGACATTCGACGGTGGTTTCCAGCTTACTCTGTTGCCTGGGGGCATTTACATGGGATACCCATCTGATGTGGCCAAGAATGTGCAAGAATCCACAGCATTTCACGTTGAGTTTTGTTGGCTAGAATCGCCTGGCAAGAGACAAAGACTTATCCGTACTTACGATGTAGAGGGCTTTGCTGTTTCATCTACTTATTTCATCGAGTCCAAGGTCTGAGTTATTTCCCCTGATTCAAAAAGATGTGCTTCAGACATCATATTTGCTCCCGCATGAACCATTTTTCCTGGGTACAAT</genome_strand>
        <mrna_strand>TGCGACTAATATTACAACAAATGTACATTGGACCGGTACCATATCCAATAACCTAGTGACATTCGACGGTGGTTTCCAGCTTACTCTGTTGCCTGGGGGCATTTACATGGGATACCCATCTGATGTGGCCAAGAATGTGCAAGAATCCACAGCATTTCACGTTGAGTTTTGTTGGCTAGAATCGCCTGGCAAGAGACAAAGACTTATCCGTACTTACGATGTAGAGGGCTTTGCTGTTTCATCTACTTATTTCATCGAGTCCAAGGTCTGAGTTATTTCCCCTGATTCAAAAAGATGTGCTTCAGACATCATATTTGCTCCCGCATGAACCGTTTTTCCTGGGTACAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E705844" ref_strand="+" ref_description="SGN-E705844 [FA28BC01]">
      <seq>ccactttcttctttatctcttgagaagaagaagaagaaaactgaaaatgggggaaacaggggaagcttcagcaatatcgtttccatctttgacaattccacctcgcccttcatttgaatccttttttaacatgtcttctttcagcccaggtccaatgtctcttgtttccagtttcttgtctgatcagagccctgattctgcagattgtcctccttctttctcccagcttctcgccggatatgaatattctggagatcctcctgggtgtcaaaagaactctgggtataaccaaaatgggtctgtgaatcctcaattgttcgttattccctctggtttgagtccttctggattccttaattctcctggctttctttccccacttcagagtccctttggaatgtcacatcagcaggctctagcacatgttacagcacaggctgaattttctagttcatatatgcaaatgcaaatgcaaatgcaagcccaagaccagtgttcctctcaggtggctccagtagaagcattaggacatgagttgtcgattgatccaaaggagtcttccttgcagataaaggaatgtctgcaatctagtttggataacaagccatcagacaatcagggtaagcaatttgaacagccggaggtttctcaatctgagaacaagacatcctctggtgctctcgataagccagcttgtgatggttataactggagaaaatatggtcagaaaaaggttaaagctagtgaatgccctangagctactataagtgcacatatctcaaatgtctagtgaagaagaaagttgagcggtctgttgatggtcacataactgagatcacatataatggccgtcacaaccatgatcaacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="65432" stop="67253"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65732" g_stop="66116" g_length="385"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="385" r_length="385" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="66117" i_stop="66468" i_length="352">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="66469" g_stop="66953" g_length="485"/>
          <reference_exon_boundary r_type="cDNA" r_start="386" r_stop="870" r_length="485" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E705844" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>870</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E705844" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65732" e_stop="66116"/>
          <exon e_start="66469" e_stop="66953"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCACTTTCTTCTTTATCTCTTGAGAAGAAGAAGAAGAAAACTGAAAATGGGGGAAACAGGGGAAGCTTCAGCAATATCGTTTCCATCTTTGACAATTCCACCTCGCCCTTCATTTGAATCCTTTTTTAACATGTCTTCTTTCAGCCCAGGTCCAATGTCTCTTGTTTCCAGTTTCTTGTCTGATCAGAGCCCTGATTCTGCAGATTGTCCTCCTTCTTTCTCCCAGCTTCTCGCCGGATATGAATATTCTGGAGATCCTCCTGGGTGTCAAAAGAACTCTGGGTATAACCAAAATGGGTCTGTGAATCCTCAATTGTTCGTTATTCCCTCTGGTTTGAGTCCTTCTGGATTCCTTAATTCTCCTGGCTTTCTTTCCCCACTTCAGGTAAAAATATAATCTGCTCAAATTCTTCATCTATCTTGTAATAATATATCAATAATAGCCAAAAACTTGTTTTTTTTTATTTTATGTTTTGATTTAGTAATTTATCTACTTTGGTAAGTTTATTCTATAAACATGTTTTTGATAAGGATCCAGTATTCTAGTAATGAGTTCGCTCAAACTTTATATGTTTTAAATTTCATCAAGTTGGGTGAATGCAGACCTTATCCCTACCTTTGTGCGTTAGAGGTAGAGAGACTGTTTCTAAGTTGGTTATAGAAATAGTTAATCTGAAAGTCATCAAAATTACTTTTGGCATCATGTGGTTACTTATGGTATTTCAATTTGATTGTAGAGTCCCTTTGGAATGTCACATCAGCAGGCTCTAGCACATGTTACAGCACAGGCTGAATTTTCTAGTTCATATATGCAAATGCAAATGCAAATGCAAGCCCAAGACCAGTGTTCCTCTCAGGTGGCTCCAGTAGAAGCATTAGGACATGAGTTGTCGATTGATCCAAAGGAGTCTTCCTTGCAGATAAAGGAATGTCTGCAATCTAGTTTGGATAACAAGCCATCAGACAATCAGGGTAAGCAATTTGAACAGCCGGAGGTTTCTCAATCTGAGAACAAGACATCCTCTGGTGCTCTCGATAAGCCAGCTTGTGATGGTTATAACTGGAGAAAATATGGTCAGAAAAAGGTTAAAGCTAGTGAATGCCCTAGGAGCTACTATAAGTGCACATATCTCAAATGTCTAGTGAAGAAGAAGGTTGAGCGGTCTGTTGATGGTCACATAACTGAGATCACATATAATGGCCGTCACAACCATGATCAACC</genome_strand>
        <mrna_strand>CCACTTTCTTCTTTATCTCTTGAGAAGAAGAAGAAGAAAACTGAAAATGGGGGAAACAGGGGAAGCTTCAGCAATATCGTTTCCATCTTTGACAATTCCACCTCGCCCTTCATTTGAATCCTTTTTTAACATGTCTTCTTTCAGCCCAGGTCCAATGTCTCTTGTTTCCAGTTTCTTGTCTGATCAGAGCCCTGATTCTGCAGATTGTCCTCCTTCTTTCTCCCAGCTTCTCGCCGGATATGAATATTCTGGAGATCCTCCTGGGTGTCAAAAGAACTCTGGGTATAACCAAAATGGGTCTGTGAATCCTCAATTGTTCGTTATTCCCTCTGGTTTGAGTCCTTCTGGATTCCTTAATTCTCCTGGCTTTCTTTCCCCACTTCAG................................................................................................................................................................................................................................................................................................................................................................AGTCCCTTTGGAATGTCACATCAGCAGGCTCTAGCACATGTTACAGCACAGGCTGAATTTTCTAGTTCATATATGCAAATGCAAATGCAAATGCAAGCCCAAGACCAGTGTTCCTCTCAGGTGGCTCCAGTAGAAGCATTAGGACATGAGTTGTCGATTGATCCAAAGGAGTCTTCCTTGCAGATAAAGGAATGTCTGCAATCTAGTTTGGATAACAAGCCATCAGACAATCAGGGTAAGCAATTTGAACAGCCGGAGGTTTCTCAATCTGAGAACAAGACATCCTCTGGTGCTCTCGATAAGCCAGCTTGTGATGGTTATAACTGGAGAAAATATGGTCAGAAAAAGGTTAAAGCTAGTGAATGCCCTANGAGCTACTATAAGTGCACATATCTCAAATGTCTAGTGAAGAAGAAAGTTGAGCGGTCTGTTGATGGTCACATAACTGAGATCACATATAATGGCCGTCACAACCATGATCAACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E298277" ref_strand="+" ref_description="SGN-E298277 [cLEW-18-A12]">
      <seq>cactttcttctttatctcttgataagaagaacaagaaaactggaaattttgtgaacattttaaacttcagcaatatcctttccatctttgacaattccacctcgcccttcatttgaatccttttttaacatgtcttctttcagcccacctccaatgtttcttgtttccagttccttgtctaatcatagccctaattctgcaaattgtcctccttctttctcccagcttctcgccggatatgaatattctggagatcctcctgggtgtcaaaagaactctgggtataaccaaaatgggtctgtgaatcctcaattgttcgttattccctctggtttgagtccttctggattccttaattctcctggcttactttccccacttcaagtaaaaatataatctgctcaaattcttcatctat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="65433" stop="66450"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65733" g_stop="66150" g_length="418"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="418" r_length="418" r_score="0.943"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E298277" ref_strand="+">
        <total_alignment_score>0.943</total_alignment_score>
        <cumulative_length_of_scored_exons>418</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E298277" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65733" e_stop="66150"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACTTTCTTCTTTATCTCTTGAGAAGAAGAAGAAGAAAACTGAAAATGGGGGAAACAGGGGAAGCTTCAGCAATATCGTTTCCATCTTTGACAATTCCACCTCGCCCTTCATTTGAATCCTTTTTTAACATGTCTTCTTTCAGCCCAGGTCCAATGTCTCTTGTTTCCAGTTTCTTGTCTGATCAGAGCCCTGATTCTGCAGATTGTCCTCCTTCTTTCTCCCAGCTTCTCGCCGGATATGAATATTCTGGAGATCCTCCTGGGTGTCAAAAGAACTCTGGGTATAACCAAAATGGGTCTGTGAATCCTCAATTGTTCGTTATTCCCTCTGGTTTGAGTCCTTCTGGATTCCTTAATTCTCCTGGCTTTCTTTCCCCACTTCAGGTAAAAATATAATCTGCTCAAATTCTTCATCTAT</genome_strand>
        <mrna_strand>CACTTTCTTCTTTATCTCTTGATAAGAAGAACAAGAAAACTGGAAATTTTGTGAACATTTTAAACTTCAGCAATATCCTTTCCATCTTTGACAATTCCACCTCGCCCTTCATTTGAATCCTTTTTTAACATGTCTTCTTTCAGCCCACCTCCAATGTTTCTTGTTTCCAGTTCCTTGTCTAATCATAGCCCTAATTCTGCAAATTGTCCTCCTTCTTTCTCCCAGCTTCTCGCCGGATATGAATATTCTGGAGATCCTCCTGGGTGTCAAAAGAACTCTGGGTATAACCAAAATGGGTCTGTGAATCCTCAATTGTTCGTTATTCCCTCTGGTTTGAGTCCTTCTGGATTCCTTAATTCTCCTGGCTTACTTTCCCCACTTCAAGTAAAAATATAATCTGCTCAAATTCTTCATCTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E326766" ref_strand="+" ref_description="SGN-E326766 [cTOC-25-C6]">
      <seq>actttcttctttatctcttgagaagaagaagaagaaaactgaaaatgggggaaacaggggaagcttcagcaatatcgtttccatctttgacaattccacctcgcccttcatttgaatccttttttaacatgtcttctttcagcccaggtccaatgtctcttgtttccagtttcttgtctgatcagagccctgattctgcagattgtcctccttctttctcccagcttctcgccggatatgaatattctggagatcctcctgggtgtcaaaagaactctgggtataaccaaaatgggtctgtgaatcctcaattgttcgttattccctctggtttgagtccttctggattccttaattctcctggctttctttccccacttcagagtccctttggaatgtcacatcagcaggctctagcacatgttacagcacaggctgaattttctagttcatatatgcaaatgcaaatgcaaatgcaagcccaagaccagtgttcctctcaggtggctccagtagaagcattaggacatgagttgtcgattgatccaaaggagtcttccttgcagataaaggaatgtctgcaatctagtttggataacaagccatcagacaatcagggtaagcaatttgaacagccggaggtttctcaatctgagaacaagacatcctctggtgctctcgataaaccagcttgtgatggttataactggagaaaatatggtcagaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="65434" stop="67112"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65734" g_stop="66116" g_length="383"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="383" r_length="383" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="66117" i_stop="66468" i_length="352">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="66469" g_stop="66812" g_length="344"/>
          <reference_exon_boundary r_type="cDNA" r_start="384" r_stop="727" r_length="344" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E326766" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>727</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E326766" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65734" e_stop="66116"/>
          <exon e_start="66469" e_stop="66812"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTTTCTTCTTTATCTCTTGAGAAGAAGAAGAAGAAAACTGAAAATGGGGGAAACAGGGGAAGCTTCAGCAATATCGTTTCCATCTTTGACAATTCCACCTCGCCCTTCATTTGAATCCTTTTTTAACATGTCTTCTTTCAGCCCAGGTCCAATGTCTCTTGTTTCCAGTTTCTTGTCTGATCAGAGCCCTGATTCTGCAGATTGTCCTCCTTCTTTCTCCCAGCTTCTCGCCGGATATGAATATTCTGGAGATCCTCCTGGGTGTCAAAAGAACTCTGGGTATAACCAAAATGGGTCTGTGAATCCTCAATTGTTCGTTATTCCCTCTGGTTTGAGTCCTTCTGGATTCCTTAATTCTCCTGGCTTTCTTTCCCCACTTCAGGTAAAAATATAATCTGCTCAAATTCTTCATCTATCTTGTAATAATATATCAATAATAGCCAAAAACTTGTTTTTTTTTATTTTATGTTTTGATTTAGTAATTTATCTACTTTGGTAAGTTTATTCTATAAACATGTTTTTGATAAGGATCCAGTATTCTAGTAATGAGTTCGCTCAAACTTTATATGTTTTAAATTTCATCAAGTTGGGTGAATGCAGACCTTATCCCTACCTTTGTGCGTTAGAGGTAGAGAGACTGTTTCTAAGTTGGTTATAGAAATAGTTAATCTGAAAGTCATCAAAATTACTTTTGGCATCATGTGGTTACTTATGGTATTTCAATTTGATTGTAGAGTCCCTTTGGAATGTCACATCAGCAGGCTCTAGCACATGTTACAGCACAGGCTGAATTTTCTAGTTCATATATGCAAATGCAAATGCAAATGCAAGCCCAAGACCAGTGTTCCTCTCAGGTGGCTCCAGTAGAAGCATTAGGACATGAGTTGTCGATTGATCCAAAGGAGTCTTCCTTGCAGATAAAGGAATGTCTGCAATCTAGTTTGGATAACAAGCCATCAGACAATCAGGGTAAGCAATTTGAACAGCCGGAGGTTTCTCAATCTGAGAACAAGACATCCTCTGGTGCTCTCGATAAGCCAGCTTGTGATGGTTATAACTGGAGAAAATATGGTCAGAA</genome_strand>
        <mrna_strand>ACTTTCTTCTTTATCTCTTGAGAAGAAGAAGAAGAAAACTGAAAATGGGGGAAACAGGGGAAGCTTCAGCAATATCGTTTCCATCTTTGACAATTCCACCTCGCCCTTCATTTGAATCCTTTTTTAACATGTCTTCTTTCAGCCCAGGTCCAATGTCTCTTGTTTCCAGTTTCTTGTCTGATCAGAGCCCTGATTCTGCAGATTGTCCTCCTTCTTTCTCCCAGCTTCTCGCCGGATATGAATATTCTGGAGATCCTCCTGGGTGTCAAAAGAACTCTGGGTATAACCAAAATGGGTCTGTGAATCCTCAATTGTTCGTTATTCCCTCTGGTTTGAGTCCTTCTGGATTCCTTAATTCTCCTGGCTTTCTTTCCCCACTTCAG................................................................................................................................................................................................................................................................................................................................................................AGTCCCTTTGGAATGTCACATCAGCAGGCTCTAGCACATGTTACAGCACAGGCTGAATTTTCTAGTTCATATATGCAAATGCAAATGCAAATGCAAGCCCAAGACCAGTGTTCCTCTCAGGTGGCTCCAGTAGAAGCATTAGGACATGAGTTGTCGATTGATCCAAAGGAGTCTTCCTTGCAGATAAAGGAATGTCTGCAATCTAGTTTGGATAACAAGCCATCAGACAATCAGGGTAAGCAATTTGAACAGCCGGAGGTTTCTCAATCTGAGAACAAGACATCCTCTGGTGCTCTCGATAAACCAGCTTGTGATGGTTATAACTGGAGAAAATATGGTCAGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E328997" ref_strand="+" ref_description="SGN-E328997 [cTOC-24-I17]">
      <seq>actttcttctttatctcttgagaagaagaagaagaaaactgaaaatgggggaaacaggggaagcttcagcaatatcgtttccatctttgacaattccacctcgcccttcatttgaatccttttttaacatgtcttctttcagcccaggtccaatgtctcttgtttccagtttcttgtctgatcagagccctgattctgcagattgtcctccttctttctcccagcttctcgccggatatgaatattctggagatcctcctgggtgtcaaaagaactctgggtataaccaaaatgggtctgtgaatcctcaattgttcgttattccctctggtttgagtccttctggattccttaattctcctggctttctttccccacttcagagtccctttggaatgtcacatcagcaggctctagcacatgttacagcacaggctgaattttctagttcatatatgcaaatgcaaatgcaaatgcaagcccaagaccagtgttcctctcaggtggctccagtagaagcattangacatgagttgtcgattgatccaaaggagtcttccttgcagataaaggaatgtctgcaatctagtttggatacaagccatcagacnatcagggtaagcaattttgacagccgggagtttctcaatctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="65434" stop="67039"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65734" g_stop="66116" g_length="383"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="383" r_length="383" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="66117" i_stop="66468" i_length="352">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="66469" g_stop="66739" g_length="271"/>
          <reference_exon_boundary r_type="cDNA" r_start="384" r_stop="653" r_length="270" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E328997" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>654</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E328997" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65734" e_stop="66116"/>
          <exon e_start="66469" e_stop="66739"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTTTCTTCTTTATCTCTTGAGAAGAAGAAGAAGAAAACTGAAAATGGGGGAAACAGGGGAAGCTTCAGCAATATCGTTTCCATCTTTGACAATTCCACCTCGCCCTTCATTTGAATCCTTTTTTAACATGTCTTCTTTCAGCCCAGGTCCAATGTCTCTTGTTTCCAGTTTCTTGTCTGATCAGAGCCCTGATTCTGCAGATTGTCCTCCTTCTTTCTCCCAGCTTCTCGCCGGATATGAATATTCTGGAGATCCTCCTGGGTGTCAAAAGAACTCTGGGTATAACCAAAATGGGTCTGTGAATCCTCAATTGTTCGTTATTCCCTCTGGTTTGAGTCCTTCTGGATTCCTTAATTCTCCTGGCTTTCTTTCCCCACTTCAGGTAAAAATATAATCTGCTCAAATTCTTCATCTATCTTGTAATAATATATCAATAATAGCCAAAAACTTGTTTTTTTTTATTTTATGTTTTGATTTAGTAATTTATCTACTTTGGTAAGTTTATTCTATAAACATGTTTTTGATAAGGATCCAGTATTCTAGTAATGAGTTCGCTCAAACTTTATATGTTTTAAATTTCATCAAGTTGGGTGAATGCAGACCTTATCCCTACCTTTGTGCGTTAGAGGTAGAGAGACTGTTTCTAAGTTGGTTATAGAAATAGTTAATCTGAAAGTCATCAAAATTACTTTTGGCATCATGTGGTTACTTATGGTATTTCAATTTGATTGTAGAGTCCCTTTGGAATGTCACATCAGCAGGCTCTAGCACATGTTACAGCACAGGCTGAATTTTCTAGTTCATATATGCAAATGCAAATGCAAATGCAAGCCCAAGACCAGTGTTCCTCTCAGGTGGCTCCAGTAGAAGCATTAGGACATGAGTTGTCGATTGATCCAAAGGAGTCTTCCTTGCAGATAAAGGAATGTCTGCAATCTAGTTTGGATAACAAGCCATCAGACAATCAGGGTAAGCAATTTGAACAGCCGGAGGTTTCTCAATCTG</genome_strand>
        <mrna_strand>ACTTTCTTCTTTATCTCTTGAGAAGAAGAAGAAGAAAACTGAAAATGGGGGAAACAGGGGAAGCTTCAGCAATATCGTTTCCATCTTTGACAATTCCACCTCGCCCTTCATTTGAATCCTTTTTTAACATGTCTTCTTTCAGCCCAGGTCCAATGTCTCTTGTTTCCAGTTTCTTGTCTGATCAGAGCCCTGATTCTGCAGATTGTCCTCCTTCTTTCTCCCAGCTTCTCGCCGGATATGAATATTCTGGAGATCCTCCTGGGTGTCAAAAGAACTCTGGGTATAACCAAAATGGGTCTGTGAATCCTCAATTGTTCGTTATTCCCTCTGGTTTGAGTCCTTCTGGATTCCTTAATTCTCCTGGCTTTCTTTCCCCACTTCAG................................................................................................................................................................................................................................................................................................................................................................AGTCCCTTTGGAATGTCACATCAGCAGGCTCTAGCACATGTTACAGCACAGGCTGAATTTTCTAGTTCATATATGCAAATGCAAATGCAAATGCAAGCCCAAGACCAGTGTTCCTCTCAGGTGGCTCCAGTAGAAGCATTANGACATGAGTTGTCGATTGATCCAAAGGAGTCTTCCTTGCAGATAAAGGAATGTCTGCAATCTAGTTTGGAT-ACAAGCCATCAGACNATCAGGGTAAGCAATTTTGACAGCCGGGAGTTTCTCAATCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E364738" ref_strand="+" ref_description="SGN-E364738 [cLPT-4-I12]">
      <seq>cactttcttctttatctttttttttttctcttgagaagaagaagaagactgaaaatgggggaaacaggggaagcttcagcaatatcgtttccatctctgacaatgccacctcgcccttcatttgaatccttttttaacatgtcttctttcagcccaggtccaatttctcttgtttccagtttcttgtctgatcagagccctgattctgcagattgtcctccttctttctcccagcttctcgccggatatgaatattctggagatcctcctgggtgtcaaaagaactctgggtataaccaaaatcggtctgtgaatcctcaattgttcattgttccctctggtttgagtccttctggattccttaattctcctggctttctttccccacttcagagtccctttggaatgtcacatcagcaggctctagcacatgttacagcacaggctgaattttctacttcatatatgcaaatgcaaatgcaaatgcaagcccaagatcagtgttcctctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="65433" stop="66886"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65759" g_stop="66116" g_length="358"/>
          <reference_exon_boundary r_type="cDNA" r_start="36" r_stop="393" r_length="358" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="66117" i_stop="66468" i_length="352">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="66469" g_stop="66586" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="394" r_stop="511" r_length="118" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="27" polyA_stop="15"/>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E364738" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>476</cumulative_length_of_scored_exons>
        <coverage percentage="0.932" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E364738" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65759" e_stop="66116"/>
          <exon e_start="66469" e_stop="66586"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAAGAAGAAAACTGAAAATGGGGGAAACAGGGGAAGCTTCAGCAATATCGTTTCCATCTTTGACAATTCCACCTCGCCCTTCATTTGAATCCTTTTTTAACATGTCTTCTTTCAGCCCAGGTCCAATGTCTCTTGTTTCCAGTTTCTTGTCTGATCAGAGCCCTGATTCTGCAGATTGTCCTCCTTCTTTCTCCCAGCTTCTCGCCGGATATGAATATTCTGGAGATCCTCCTGGGTGTCAAAAGAACTCTGGGTATAACCAAAATGGGTCTGTGAATCCTCAATTGTTCGTTATTCCCTCTGGTTTGAGTCCTTCTGGATTCCTTAATTCTCCTGGCTTTCTTTCCCCACTTCAGGTAAAAATATAATCTGCTCAAATTCTTCATCTATCTTGTAATAATATATCAATAATAGCCAAAAACTTGTTTTTTTTTATTTTATGTTTTGATTTAGTAATTTATCTACTTTGGTAAGTTTATTCTATAAACATGTTTTTGATAAGGATCCAGTATTCTAGTAATGAGTTCGCTCAAACTTTATATGTTTTAAATTTCATCAAGTTGGGTGAATGCAGACCTTATCCCTACCTTTGTGCGTTAGAGGTAGAGAGACTGTTTCTAAGTTGGTTATAGAAATAGTTAATCTGAAAGTCATCAAAATTACTTTTGGCATCATGTGGTTACTTATGGTATTTCAATTTGATTGTAGAGTCCCTTTGGAATGTCACATCAGCAGGCTCTAGCACATGTTACAGCACAGGCTGAATTTTCTAGTTCATATATGCAAATGCAAATGCAAATGCAAGCCCAAGACCAGTGTTCCTCTC</genome_strand>
        <mrna_strand>AAGAAGAAGAAGACTGAAAATGGGGGAAACAGGGGAAGCTTCAGCAATATCGTTTCCATCTCTGACAATGCCACCTCGCCCTTCATTTGAATCCTTTTTTAACATGTCTTCTTTCAGCCCAGGTCCAATTTCTCTTGTTTCCAGTTTCTTGTCTGATCAGAGCCCTGATTCTGCAGATTGTCCTCCTTCTTTCTCCCAGCTTCTCGCCGGATATGAATATTCTGGAGATCCTCCTGGGTGTCAAAAGAACTCTGGGTATAACCAAAATCGGTCTGTGAATCCTCAATTGTTCATTGTTCCCTCTGGTTTGAGTCCTTCTGGATTCCTTAATTCTCCTGGCTTTCTTTCCCCACTTCAG................................................................................................................................................................................................................................................................................................................................................................AGTCCCTTTGGAATGTCACATCAGCAGGCTCTAGCACATGTTACAGCACAGGCTGAATTTTCTACTTCATATATGCAAATGCAAATGCAAATGCAAGCCCAAGATCAGTGTTCCTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E278858" ref_strand="+" ref_description="SGN-E278858 [cLER-2-L10]">
      <seq>tgaaaatgggggaaacaggggaagcttcagcaatatcgtttccatctttgacaattccacctcgcccttcatttgaatccttttttaacatgtcttctttcagcccaggtccaatgtctcttgtttccagtttcttgtctgatcagagccctgattctgcagattgtcctccttctttctcccagcttctcgccggatatgaatattctggagatcctcctgggtgtcaaaagaactctgggtataaccaaaatgggtctgtgaatcctcaattgttcgttattccctctggtttgagtccttctggattccttaattctcctggctttctttccccacttcagagtccctttggaatgtcacatcagcaggctctagcacatgttacagcacaggctgaattttctagttcatatatgcaaatgcaaatgcaaatgcaagcccaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="65473" stop="66871"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65773" g_stop="66116" g_length="344"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="344" r_length="344" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="66117" i_stop="66468" i_length="352">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="66469" g_stop="66571" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="345" r_stop="447" r_length="103" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E278858" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>447</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E278858" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65773" e_stop="66116"/>
          <exon e_start="66469" e_stop="66571"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAAATGGGGGAAACAGGGGAAGCTTCAGCAATATCGTTTCCATCTTTGACAATTCCACCTCGCCCTTCATTTGAATCCTTTTTTAACATGTCTTCTTTCAGCCCAGGTCCAATGTCTCTTGTTTCCAGTTTCTTGTCTGATCAGAGCCCTGATTCTGCAGATTGTCCTCCTTCTTTCTCCCAGCTTCTCGCCGGATATGAATATTCTGGAGATCCTCCTGGGTGTCAAAAGAACTCTGGGTATAACCAAAATGGGTCTGTGAATCCTCAATTGTTCGTTATTCCCTCTGGTTTGAGTCCTTCTGGATTCCTTAATTCTCCTGGCTTTCTTTCCCCACTTCAGGTAAAAATATAATCTGCTCAAATTCTTCATCTATCTTGTAATAATATATCAATAATAGCCAAAAACTTGTTTTTTTTTATTTTATGTTTTGATTTAGTAATTTATCTACTTTGGTAAGTTTATTCTATAAACATGTTTTTGATAAGGATCCAGTATTCTAGTAATGAGTTCGCTCAAACTTTATATGTTTTAAATTTCATCAAGTTGGGTGAATGCAGACCTTATCCCTACCTTTGTGCGTTAGAGGTAGAGAGACTGTTTCTAAGTTGGTTATAGAAATAGTTAATCTGAAAGTCATCAAAATTACTTTTGGCATCATGTGGTTACTTATGGTATTTCAATTTGATTGTAGAGTCCCTTTGGAATGTCACATCAGCAGGCTCTAGCACATGTTACAGCACAGGCTGAATTTTCTAGTTCATATATGCAAATGCAAATGCAAATGCAAGCCCAAG</genome_strand>
        <mrna_strand>TGAAAATGGGGGAAACAGGGGAAGCTTCAGCAATATCGTTTCCATCTTTGACAATTCCACCTCGCCCTTCATTTGAATCCTTTTTTAACATGTCTTCTTTCAGCCCAGGTCCAATGTCTCTTGTTTCCAGTTTCTTGTCTGATCAGAGCCCTGATTCTGCAGATTGTCCTCCTTCTTTCTCCCAGCTTCTCGCCGGATATGAATATTCTGGAGATCCTCCTGGGTGTCAAAAGAACTCTGGGTATAACCAAAATGGGTCTGTGAATCCTCAATTGTTCGTTATTCCCTCTGGTTTGAGTCCTTCTGGATTCCTTAATTCTCCTGGCTTTCTTTCCCCACTTCAG................................................................................................................................................................................................................................................................................................................................................................AGTCCCTTTGGAATGTCACATCAGCAGGCTCTAGCACATGTTACAGCACAGGCTGAATTTTCTAGTTCATATATGCAAATGCAAATGCAAATGCAAGCCCAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E355776" ref_strand="+" ref_description="SGN-E355776 [cLHT-12-A13]">
      <seq>agcaatatcgtttccatctctgacaattccacctcgcccttcatttgaatccttttttaacatgtcctctttcagcccaggtccaatgtctcttgtttccagtttcttgtctgatcagagccctgattctgcagattgtcctccttctttctcccagcttctcgccggatatgaatattctggagatcctcctgggtgtcaaaagaactctgggaataaccaaaatcggtctgtgaatcctcaattgttcattattccctctggtttgagtccttctggattccttaattctcctggctttctttccccacttcagagtccctttggaatgtcacatcagcaggctctagcacatgttacagcacaggctgaattttctacttcatatatgcaaatgcaaatgcaaatgcaagcccaagatcagtgttcctctcaggtggctccagtagaagcattaggacatgagttgtcgattgatccaaaggagtcttctttgcagataaaggaatgttagcaaactagtttggataacaaaccatcagacaatcagggtaagcaatttgaacagctggaggtttctcaatctgagaacaagacatcctttggtgctctcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="65501" stop="67066"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65801" g_stop="66116" g_length="316"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="316" r_length="316" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="66117" i_stop="66468" i_length="352">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="66469" g_stop="66766" g_length="298"/>
          <reference_exon_boundary r_type="cDNA" r_start="317" r_stop="614" r_length="298" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E355776" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>614</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E355776" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65801" e_stop="66116"/>
          <exon e_start="66469" e_stop="66766"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCAATATCGTTTCCATCTTTGACAATTCCACCTCGCCCTTCATTTGAATCCTTTTTTAACATGTCTTCTTTCAGCCCAGGTCCAATGTCTCTTGTTTCCAGTTTCTTGTCTGATCAGAGCCCTGATTCTGCAGATTGTCCTCCTTCTTTCTCCCAGCTTCTCGCCGGATATGAATATTCTGGAGATCCTCCTGGGTGTCAAAAGAACTCTGGGTATAACCAAAATGGGTCTGTGAATCCTCAATTGTTCGTTATTCCCTCTGGTTTGAGTCCTTCTGGATTCCTTAATTCTCCTGGCTTTCTTTCCCCACTTCAGGTAAAAATATAATCTGCTCAAATTCTTCATCTATCTTGTAATAATATATCAATAATAGCCAAAAACTTGTTTTTTTTTATTTTATGTTTTGATTTAGTAATTTATCTACTTTGGTAAGTTTATTCTATAAACATGTTTTTGATAAGGATCCAGTATTCTAGTAATGAGTTCGCTCAAACTTTATATGTTTTAAATTTCATCAAGTTGGGTGAATGCAGACCTTATCCCTACCTTTGTGCGTTAGAGGTAGAGAGACTGTTTCTAAGTTGGTTATAGAAATAGTTAATCTGAAAGTCATCAAAATTACTTTTGGCATCATGTGGTTACTTATGGTATTTCAATTTGATTGTAGAGTCCCTTTGGAATGTCACATCAGCAGGCTCTAGCACATGTTACAGCACAGGCTGAATTTTCTAGTTCATATATGCAAATGCAAATGCAAATGCAAGCCCAAGACCAGTGTTCCTCTCAGGTGGCTCCAGTAGAAGCATTAGGACATGAGTTGTCGATTGATCCAAAGGAGTCTTCCTTGCAGATAAAGGAATGTCTGCAATCTAGTTTGGATAACAAGCCATCAGACAATCAGGGTAAGCAATTTGAACAGCCGGAGGTTTCTCAATCTGAGAACAAGACATCCTCTGGTGCTCTCG</genome_strand>
        <mrna_strand>AGCAATATCGTTTCCATCTCTGACAATTCCACCTCGCCCTTCATTTGAATCCTTTTTTAACATGTCCTCTTTCAGCCCAGGTCCAATGTCTCTTGTTTCCAGTTTCTTGTCTGATCAGAGCCCTGATTCTGCAGATTGTCCTCCTTCTTTCTCCCAGCTTCTCGCCGGATATGAATATTCTGGAGATCCTCCTGGGTGTCAAAAGAACTCTGGGAATAACCAAAATCGGTCTGTGAATCCTCAATTGTTCATTATTCCCTCTGGTTTGAGTCCTTCTGGATTCCTTAATTCTCCTGGCTTTCTTTCCCCACTTCAG................................................................................................................................................................................................................................................................................................................................................................AGTCCCTTTGGAATGTCACATCAGCAGGCTCTAGCACATGTTACAGCACAGGCTGAATTTTCTACTTCATATATGCAAATGCAAATGCAAATGCAAGCCCAAGATCAGTGTTCCTCTCAGGTGGCTCCAGTAGAAGCATTAGGACATGAGTTGTCGATTGATCCAAAGGAGTCTTCTTTGCAGATAAAGGAATGTTAGCAAACTAGTTTGGATAACAAACCATCAGACAATCAGGGTAAGCAATTTGAACAGCTGGAGGTTTCTCAATCTGAGAACAAGACATCCTTTGGTGCTCTCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E236443" ref_strand="+" ref_description="SGN-E236443 [cLED-13-J7]">
      <seq>ggattccttaattctcctggctttctttccccacttcagagtccctttggaatgtcacatcagcaggctctagcacatgttacagcacaggctgaattttctagttcatatatgcaaatgcaaatgcaaatgcaagcccaagaccagtgttcctctcaggtggctccagtagaagcattaggacatgagttgtcgattgatccaaaggagtcttccttgcagataaaggaatgtctgcaatctagtttggataacaagccatcagacaatcagggtaagcaatttgaacagccggaggtttctcaatctgagaacaagacatcctctggtgctctcgataagccagcttgtgatggttataactggagaaaatatggtcagaaaaaggttaaagctagtgaatgccctaggagctactataagtgcacatatctcaaatgtctagtgaagaagaaggttgagcggtctgttgatggtcacataactgagatcacatataatggccgtcacaaccatgatcaaccaaccaaacgaagaaaaaatggttctgctttggataatacagactgctttggagttcgaccagatattagtacacatgattggacagtaatgaatagctcggat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="65778" stop="67356"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66078" g_stop="66116" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="39" r_length="39" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="66117" i_stop="66468" i_length="352">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="66469" g_stop="67056" g_length="588"/>
          <reference_exon_boundary r_type="cDNA" r_start="40" r_stop="627" r_length="588" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E236443" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>627</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E236443" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66078" e_stop="66116"/>
          <exon e_start="66469" e_stop="67056"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGATTCCTTAATTCTCCTGGCTTTCTTTCCCCACTTCAGGTAAAAATATAATCTGCTCAAATTCTTCATCTATCTTGTAATAATATATCAATAATAGCCAAAAACTTGTTTTTTTTTATTTTATGTTTTGATTTAGTAATTTATCTACTTTGGTAAGTTTATTCTATAAACATGTTTTTGATAAGGATCCAGTATTCTAGTAATGAGTTCGCTCAAACTTTATATGTTTTAAATTTCATCAAGTTGGGTGAATGCAGACCTTATCCCTACCTTTGTGCGTTAGAGGTAGAGAGACTGTTTCTAAGTTGGTTATAGAAATAGTTAATCTGAAAGTCATCAAAATTACTTTTGGCATCATGTGGTTACTTATGGTATTTCAATTTGATTGTAGAGTCCCTTTGGAATGTCACATCAGCAGGCTCTAGCACATGTTACAGCACAGGCTGAATTTTCTAGTTCATATATGCAAATGCAAATGCAAATGCAAGCCCAAGACCAGTGTTCCTCTCAGGTGGCTCCAGTAGAAGCATTAGGACATGAGTTGTCGATTGATCCAAAGGAGTCTTCCTTGCAGATAAAGGAATGTCTGCAATCTAGTTTGGATAACAAGCCATCAGACAATCAGGGTAAGCAATTTGAACAGCCGGAGGTTTCTCAATCTGAGAACAAGACATCCTCTGGTGCTCTCGATAAGCCAGCTTGTGATGGTTATAACTGGAGAAAATATGGTCAGAAAAAGGTTAAAGCTAGTGAATGCCCTAGGAGCTACTATAAGTGCACATATCTCAAATGTCTAGTGAAGAAGAAGGTTGAGCGGTCTGTTGATGGTCACATAACTGAGATCACATATAATGGCCGTCACAACCATGATCAACCAACCAAACGAAGAAAAAATGGTTCTGCTTTGGATAATACAGACTGCTTTGGAGTTCGACCAGATATTAGTACACATGATTGGACAGTAATGAATAGCTCGGAT</genome_strand>
        <mrna_strand>GGATTCCTTAATTCTCCTGGCTTTCTTTCCCCACTTCAG................................................................................................................................................................................................................................................................................................................................................................AGTCCCTTTGGAATGTCACATCAGCAGGCTCTAGCACATGTTACAGCACAGGCTGAATTTTCTAGTTCATATATGCAAATGCAAATGCAAATGCAAGCCCAAGACCAGTGTTCCTCTCAGGTGGCTCCAGTAGAAGCATTAGGACATGAGTTGTCGATTGATCCAAAGGAGTCTTCCTTGCAGATAAAGGAATGTCTGCAATCTAGTTTGGATAACAAGCCATCAGACAATCAGGGTAAGCAATTTGAACAGCCGGAGGTTTCTCAATCTGAGAACAAGACATCCTCTGGTGCTCTCGATAAGCCAGCTTGTGATGGTTATAACTGGAGAAAATATGGTCAGAAAAAGGTTAAAGCTAGTGAATGCCCTAGGAGCTACTATAAGTGCACATATCTCAAATGTCTAGTGAAGAAGAAGGTTGAGCGGTCTGTTGATGGTCACATAACTGAGATCACATATAATGGCCGTCACAACCATGATCAACCAACCAAACGAAGAAAAAATGGTTCTGCTTTGGATAATACAGACTGCTTTGGAGTTCGACCAGATATTAGTACACATGATTGGACAGTAATGAATAGCTCGGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E239839" ref_strand="+" ref_description="SGN-E239839 [cLED-29-L11]">
      <seq>tagttcatatatgcaaatgcaaatgcaaatgcaagcccaagaccagtgttcctctcaggtggctccagtagaagcattaggacatgagttgtcgattgatccaaaggagtcttccttgcagataaaggaatgtctgcaatctagtttggataacaagccatcagacaatcagggtaagcaatttgaacagccggaggtttctcaatctgagaacaagacatcctctggtgctctcgataagccagct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="66231" stop="67077"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66531" g_stop="66777" g_length="247"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="247" r_length="247" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E239839" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>247</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E239839" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66531" e_stop="66777"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGTTCATATATGCAAATGCAAATGCAAATGCAAGCCCAAGACCAGTGTTCCTCTCAGGTGGCTCCAGTAGAAGCATTAGGACATGAGTTGTCGATTGATCCAAAGGAGTCTTCCTTGCAGATAAAGGAATGTCTGCAATCTAGTTTGGATAACAAGCCATCAGACAATCAGGGTAAGCAATTTGAACAGCCGGAGGTTTCTCAATCTGAGAACAAGACATCCTCTGGTGCTCTCGATAAGCCAGCT</genome_strand>
        <mrna_strand>TAGTTCATATATGCAAATGCAAATGCAAATGCAAGCCCAAGACCAGTGTTCCTCTCAGGTGGCTCCAGTAGAAGCATTAGGACATGAGTTGTCGATTGATCCAAAGGAGTCTTCCTTGCAGATAAAGGAATGTCTGCAATCTAGTTTGGATAACAAGCCATCAGACAATCAGGGTAAGCAATTTGAACAGCCGGAGGTTTCTCAATCTGAGAACAAGACATCCTCTGGTGCTCTCGATAAGCCAGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E708797" ref_strand="+" ref_description="SGN-E708797 [FA36DB10]">
      <seq>cgataaggttaaagctagtgaatgccctaggagctactataagtgcacatatctcaaatgtctagtgaagaagaaggttgagcggtctgttgatggtcacataactgagatcacatataatggccgtcacaaccatgatcaaccaaccaaacgaagaaaaaatggttctgctttggataatacagactgctttggagttcgaccagatattagtacacatgattggacagtaatgaatagctcggatgggtcttctccttctcgatctgaccaggttccaacccaaatggtatctgaacttcttgtgaaaagagaatgtgatgaaaccgaaagctatttgatagacgtagatgatgaagggcatgatgaaccagatgcaaagagaacgaagacggcaattgagactgtagcttcatcacatgtcacagtagctgaatccaagattgttctgcagacgagaagtgaagttgatttcttagatgatggatataaatggcgaaaatatgggcagaaggtggtaaaggggactcagcatccaaggagttactatcggtgcacatatcctggatgcaatgtccgcaaacaagtcgagagggcttcaactgatccaaaagctgtcataacaacatatgaaggcaagcataatcatgatattcctactgttagtgttaggaatagaggaacaaggaataaatacagctaaagatagcgttgagaacgtaagaaacagtgtgaaggccttcagttcacaaaaatatcttggtttctgaaaacaacaacaaaattccctcgtgtgaaaactgaaagattgcagcattagtagcatcaggaaaagtagaagggtgaaaagatgtggtttgagcttcttacttcggtacaaaaagcttattatattat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="66512" stop="68673"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66810" g_stop="67196" g_length="387"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="387" r_length="387" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="67197" i_stop="67307" i_length="111">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="67308" g_stop="67460" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="388" r_stop="540" r_length="153" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="67461" i_stop="68016" i_length="556">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="68017" g_stop="68373" g_length="357"/>
          <reference_exon_boundary r_type="cDNA" r_start="541" r_stop="897" r_length="357" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E708797" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>897</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E708797" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66810" e_stop="67196"/>
          <exon e_start="67308" e_stop="67460"/>
          <exon e_start="68017" e_stop="68373"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAAAGGTTAAAGCTAGTGAATGCCCTAGGAGCTACTATAAGTGCACATATCTCAAATGTCTAGTGAAGAAGAAGGTTGAGCGGTCTGTTGATGGTCACATAACTGAGATCACATATAATGGCCGTCACAACCATGATCAACCAACCAAACGAAGAAAAAATGGTTCTGCTTTGGATAATACAGACTGCTTTGGAGTTCGACCAGATATTAGTACACATGATTGGACAGTAATGAATAGCTCGGATGGGTCTTCTCCTTCTCGATCTGACCAGGTTCCAACCCAAATGGTATCTGAACTTCTTGTGAAAAGAGAATGTGATGAAACCGAAAGCTATTTGATAGACGTAGATGATGAAGGGCATGATGAACCAGATGCAAAGAGAACGTGAGTCCTCCTTTCATGACTAAAAGAATGCGCCATCCTTCTTTAGTAAAACAAGAAGAAAATATTGTAGAGCAACAAAAGTATGTATCTAATTCAATTACTATGTCACAGGAAGACGGCAATTGAGACTGTAGCTTCATCACATGTCACAGTAGCTGAATCCAAGATTGTTCTGCAGACGAGAAGTGAAGTTGATTTCTTAGATGATGGATATAAATGGCGAAAATATGGGCAGAAGGTGGTAAAGGGGACTCAGCATCCAAGGTATCTTCTGAGTTCTGACTGCACAATTTTTTTCAATTTAATGTTAGTTGCTGTTCTGTAAGAGTCTTGTTTTATGTAGAGTTTATTATCGTGAACTCTTCAGGAAATGATGCTACTTATCTCCTTGAACTTCTTAAATATACCAAAACAATAGCTCAAATTTCTTGTGCATCTTGATTTTACAATAGTCTGAAATGGATACAGTGTGAAGTCCCATACAAGAGGAAACTTGCACAATGTAGTTAAGAATGTCACTAGAGGTTTATTCAACAGTGATAACATTTCTTACGAAATAGGAAGAACTGGATGTATGAATTTTTATGCGAAAGCATGTGCCAGAATTTAAAGATCTTTATATGTGCATATGATTAGTCATTAGAACAAACAAGTGCAGTAAGATACTCTGGAGATTAAAATCAAGTGCTATAATCAGCTGCAGCGTCTTGTTTGAGCAATACTAGTTCTTTGTCCTTCCAGAATATGTTTATCACATGTGTCCTGTTCTTTTGCTATATGGCATCAATAATCCGCTTGTGCATCCACACTTGATATACAGGAGTTACTATCGGTGCACATATCCTGGATGCAATGTCCGCAAACAAGTCGAGAGGGCTTCAACTGATCCAAAAGCTGTCATAACAACATATGAAGGCAAGCATAATCATGATATTCCTACTGTTAGTGTTAGGAATAGAGGAACAAGGAATAAATACAGCTAAAGATAGCGTTGAGAACGTAAGAAACAGTGTGAAGGCCTTCAGTTCACAAAAATATCTTGGTTTCTGAAAACAACAACAAAATTCCCTCGTGTGAAAACTGAAAGATTGCAGCATTAGTAGCATCAGGAAAAGTAGAAGGGTGAAAAGATGTGGTTTGAGCTTCTTACTTCTGTACAAAAAGCTTATTATATTAT</genome_strand>
        <mrna_strand>CGATAAGGTTAAAGCTAGTGAATGCCCTAGGAGCTACTATAAGTGCACATATCTCAAATGTCTAGTGAAGAAGAAGGTTGAGCGGTCTGTTGATGGTCACATAACTGAGATCACATATAATGGCCGTCACAACCATGATCAACCAACCAAACGAAGAAAAAATGGTTCTGCTTTGGATAATACAGACTGCTTTGGAGTTCGACCAGATATTAGTACACATGATTGGACAGTAATGAATAGCTCGGATGGGTCTTCTCCTTCTCGATCTGACCAGGTTCCAACCCAAATGGTATCTGAACTTCTTGTGAAAAGAGAATGTGATGAAACCGAAAGCTATTTGATAGACGTAGATGATGAAGGGCATGATGAACCAGATGCAAAGAGAAC...............................................................................................................GAAGACGGCAATTGAGACTGTAGCTTCATCACATGTCACAGTAGCTGAATCCAAGATTGTTCTGCAGACGAGAAGTGAAGTTGATTTCTTAGATGATGGATATAAATGGCGAAAATATGGGCAGAAGGTGGTAAAGGGGACTCAGCATCCAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTACTATCGGTGCACATATCCTGGATGCAATGTCCGCAAACAAGTCGAGAGGGCTTCAACTGATCCAAAAGCTGTCATAACAACATATGAAGGCAAGCATAATCATGATATTCCTACTGTTAGTGTTAGGAATAGAGGAACAAGGAATAAATACAGCTAAAGATAGCGTTGAGAACGTAAGAAACAGTGTGAAGGCCTTCAGTTCACAAAAATATCTTGGTTTCTGAAAACAACAACAAAATTCCCTCGTGTGAAAACTGAAAGATTGCAGCATTAGTAGCATCAGGAAAAGTAGAAGGGTGAAAAGATGTGGTTTGAGCTTCTTACTTCGGTACAAAAAGCTTATTATATTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E704441" ref_strand="+" ref_description="SGN-E704441 [FA24BC02]">
      <seq>gtgaagaagaaggttgagcggtctgttgatggtcacataactgagatcacatataatggccgtcacaaccatgatcaaccaaccaaacgaagaaaaaatggttctgctttggataatacagactgctttggagttcgaccagatattagtacacatgattggacagtaatgaatagctcggatgggtcttctccttctcgatctgaccaggttccaacccaaatggtatctgaacttcttgtgaaaagagaatgtgatgaaaccgaaagctatttgatagacgtagatgatgaagggcatgatgaaccagatgcaaagagaacgaagacggcaattgagactgtagcttcatcacatgtcacagtagctgaatccaagattgttctgcagacgagaagtgaagttgatttcttagatgatggatataaatggcgaaaatatgggcagaaggtggtaaaggggactcagcatccaaggagttactatcggtgcacatatcctggatgcaatgtccgcaaacaagtcgagagggcttcaactgatccaaaagctgtcataacaacatatgaaggcaagcataatcatgatattcctactgttagtgttaggaatagaggaacaaggaataaatacagctaaagatagcgttgagaacgtaagaaacagtgtgaaggccttcagttcacaaaaatatcttggtttctgaaaacaacaacaaaattccctcgtgtgaaaactgaaagattgcagcattagtagcatcaggaaaagtagaagggtgaaaagatgtggtttgagcttcttacttctgtacaaaaagcttattatattatctattccatgttgaaaaccacatgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="66574" stop="68699"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66874" g_stop="67196" g_length="323"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="323" r_length="323" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="67197" i_stop="67307" i_length="111">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="67308" g_stop="67460" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="324" r_stop="476" r_length="153" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="67461" i_stop="68016" i_length="556">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="68017" g_stop="68399" g_length="383"/>
          <reference_exon_boundary r_type="cDNA" r_start="477" r_stop="859" r_length="383" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E704441" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>859</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E704441" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66874" e_stop="67196"/>
          <exon e_start="67308" e_stop="67460"/>
          <exon e_start="68017" e_stop="68399"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGAAGAAGAAGGTTGAGCGGTCTGTTGATGGTCACATAACTGAGATCACATATAATGGCCGTCACAACCATGATCAACCAACCAAACGAAGAAAAAATGGTTCTGCTTTGGATAATACAGACTGCTTTGGAGTTCGACCAGATATTAGTACACATGATTGGACAGTAATGAATAGCTCGGATGGGTCTTCTCCTTCTCGATCTGACCAGGTTCCAACCCAAATGGTATCTGAACTTCTTGTGAAAAGAGAATGTGATGAAACCGAAAGCTATTTGATAGACGTAGATGATGAAGGGCATGATGAACCAGATGCAAAGAGAACGTGAGTCCTCCTTTCATGACTAAAAGAATGCGCCATCCTTCTTTAGTAAAACAAGAAGAAAATATTGTAGAGCAACAAAAGTATGTATCTAATTCAATTACTATGTCACAGGAAGACGGCAATTGAGACTGTAGCTTCATCACATGTCACAGTAGCTGAATCCAAGATTGTTCTGCAGACGAGAAGTGAAGTTGATTTCTTAGATGATGGATATAAATGGCGAAAATATGGGCAGAAGGTGGTAAAGGGGACTCAGCATCCAAGGTATCTTCTGAGTTCTGACTGCACAATTTTTTTCAATTTAATGTTAGTTGCTGTTCTGTAAGAGTCTTGTTTTATGTAGAGTTTATTATCGTGAACTCTTCAGGAAATGATGCTACTTATCTCCTTGAACTTCTTAAATATACCAAAACAATAGCTCAAATTTCTTGTGCATCTTGATTTTACAATAGTCTGAAATGGATACAGTGTGAAGTCCCATACAAGAGGAAACTTGCACAATGTAGTTAAGAATGTCACTAGAGGTTTATTCAACAGTGATAACATTTCTTACGAAATAGGAAGAACTGGATGTATGAATTTTTATGCGAAAGCATGTGCCAGAATTTAAAGATCTTTATATGTGCATATGATTAGTCATTAGAACAAACAAGTGCAGTAAGATACTCTGGAGATTAAAATCAAGTGCTATAATCAGCTGCAGCGTCTTGTTTGAGCAATACTAGTTCTTTGTCCTTCCAGAATATGTTTATCACATGTGTCCTGTTCTTTTGCTATATGGCATCAATAATCCGCTTGTGCATCCACACTTGATATACAGGAGTTACTATCGGTGCACATATCCTGGATGCAATGTCCGCAAACAAGTCGAGAGGGCTTCAACTGATCCAAAAGCTGTCATAACAACATATGAAGGCAAGCATAATCATGATATTCCTACTGTTAGTGTTAGGAATAGAGGAACAAGGAATAAATACAGCTAAAGATAGCGTTGAGAACGTAAGAAACAGTGTGAAGGCCTTCAGTTCACAAAAATATCTTGGTTTCTGAAAACAACAACAAAATTCCCTCGTGTGAAAACTGAAAGATTGCAGCATTAGTAGCATCAGGAAAAGTAGAAGGGTGAAAAGATGTGGTTTGAGCTTCTTACTTCTGTACAAAAAGCTTATTATATTATCTATTCCATGTTGAAAACCACATGCT</genome_strand>
        <mrna_strand>GTGAAGAAGAAGGTTGAGCGGTCTGTTGATGGTCACATAACTGAGATCACATATAATGGCCGTCACAACCATGATCAACCAACCAAACGAAGAAAAAATGGTTCTGCTTTGGATAATACAGACTGCTTTGGAGTTCGACCAGATATTAGTACACATGATTGGACAGTAATGAATAGCTCGGATGGGTCTTCTCCTTCTCGATCTGACCAGGTTCCAACCCAAATGGTATCTGAACTTCTTGTGAAAAGAGAATGTGATGAAACCGAAAGCTATTTGATAGACGTAGATGATGAAGGGCATGATGAACCAGATGCAAAGAGAAC...............................................................................................................GAAGACGGCAATTGAGACTGTAGCTTCATCACATGTCACAGTAGCTGAATCCAAGATTGTTCTGCAGACGAGAAGTGAAGTTGATTTCTTAGATGATGGATATAAATGGCGAAAATATGGGCAGAAGGTGGTAAAGGGGACTCAGCATCCAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTACTATCGGTGCACATATCCTGGATGCAATGTCCGCAAACAAGTCGAGAGGGCTTCAACTGATCCAAAAGCTGTCATAACAACATATGAAGGCAAGCATAATCATGATATTCCTACTGTTAGTGTTAGGAATAGAGGAACAAGGAATAAATACAGCTAAAGATAGCGTTGAGAACGTAAGAAACAGTGTGAAGGCCTTCAGTTCACAAAAATATCTTGGTTTCTGAAAACAACAACAAAATTCCCTCGTGTGAAAACTGAAAGATTGCAGCATTAGTAGCATCAGGAAAAGTAGAAGGGTGAAAAGATGTGGTTTGAGCTTCTTACTTCTGTACAAAAAGCTTATTATATTATCTATTCCATGTTGAAAACCACATGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E235450" ref_strand="+" ref_description="SGN-E235450 [cLED-11-I3]">
      <seq>caggttccaacccaaatggtatctgaacttcttgtgaaaagagaatgtgatgaaaccgaaagctatttgatagacgtagatgatgaagggcatgatgaaccagatgcaaagagaacgaagacggcaattgagactgtagcttcatcacatgtcacagtagctgaatccaagattgttctgcagacgagaagtgaagttgatttcttagatgatggatataaatggcgaaaatatgggcagaaggtggtaaaggggactcagcatccaaggagttactatcggtgcacatatcctggatgcaatgtccgcaaacaagtcgagagggcttcaactgatccaaaagctgtcataacaacatatgaaggcaagcataatcatgatattcctactgttagtgttaggaatagaggaacaaggaataaatacagctaaagatagcgttgagaacgtaagaaacagtgtgaaggccttcagttcacaaaaatatcttggtttctgaaaacaacaacaaaattccctcgtgtgaaaactgaaagattgcagcattagtagcatcaggaaaagtagaagggtgaaaagatgtggnttgagcttcttacttctgtacaaaaagcttattatattatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="66781" stop="68674"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67081" g_stop="67196" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="116" r_length="116" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="67197" i_stop="67307" i_length="111">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="67308" g_stop="67460" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="117" r_stop="269" r_length="153" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="67461" i_stop="68016" i_length="556">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="68017" g_stop="68374" g_length="358"/>
          <reference_exon_boundary r_type="cDNA" r_start="270" r_stop="627" r_length="358" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E235450" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>627</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E235450" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67081" e_stop="67196"/>
          <exon e_start="67308" e_stop="67460"/>
          <exon e_start="68017" e_stop="68374"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGGTTCCAACCCAAATGGTATCTGAACTTCTTGTGAAAAGAGAATGTGATGAAACCGAAAGCTATTTGATAGACGTAGATGATGAAGGGCATGATGAACCAGATGCAAAGAGAACGTGAGTCCTCCTTTCATGACTAAAAGAATGCGCCATCCTTCTTTAGTAAAACAAGAAGAAAATATTGTAGAGCAACAAAAGTATGTATCTAATTCAATTACTATGTCACAGGAAGACGGCAATTGAGACTGTAGCTTCATCACATGTCACAGTAGCTGAATCCAAGATTGTTCTGCAGACGAGAAGTGAAGTTGATTTCTTAGATGATGGATATAAATGGCGAAAATATGGGCAGAAGGTGGTAAAGGGGACTCAGCATCCAAGGTATCTTCTGAGTTCTGACTGCACAATTTTTTTCAATTTAATGTTAGTTGCTGTTCTGTAAGAGTCTTGTTTTATGTAGAGTTTATTATCGTGAACTCTTCAGGAAATGATGCTACTTATCTCCTTGAACTTCTTAAATATACCAAAACAATAGCTCAAATTTCTTGTGCATCTTGATTTTACAATAGTCTGAAATGGATACAGTGTGAAGTCCCATACAAGAGGAAACTTGCACAATGTAGTTAAGAATGTCACTAGAGGTTTATTCAACAGTGATAACATTTCTTACGAAATAGGAAGAACTGGATGTATGAATTTTTATGCGAAAGCATGTGCCAGAATTTAAAGATCTTTATATGTGCATATGATTAGTCATTAGAACAAACAAGTGCAGTAAGATACTCTGGAGATTAAAATCAAGTGCTATAATCAGCTGCAGCGTCTTGTTTGAGCAATACTAGTTCTTTGTCCTTCCAGAATATGTTTATCACATGTGTCCTGTTCTTTTGCTATATGGCATCAATAATCCGCTTGTGCATCCACACTTGATATACAGGAGTTACTATCGGTGCACATATCCTGGATGCAATGTCCGCAAACAAGTCGAGAGGGCTTCAACTGATCCAAAAGCTGTCATAACAACATATGAAGGCAAGCATAATCATGATATTCCTACTGTTAGTGTTAGGAATAGAGGAACAAGGAATAAATACAGCTAAAGATAGCGTTGAGAACGTAAGAAACAGTGTGAAGGCCTTCAGTTCACAAAAATATCTTGGTTTCTGAAAACAACAACAAAATTCCCTCGTGTGAAAACTGAAAGATTGCAGCATTAGTAGCATCAGGAAAAGTAGAAGGGTGAAAAGATGTGGTTTGAGCTTCTTACTTCTGTACAAAAAGCTTATTATATTATC</genome_strand>
        <mrna_strand>CAGGTTCCAACCCAAATGGTATCTGAACTTCTTGTGAAAAGAGAATGTGATGAAACCGAAAGCTATTTGATAGACGTAGATGATGAAGGGCATGATGAACCAGATGCAAAGAGAAC...............................................................................................................GAAGACGGCAATTGAGACTGTAGCTTCATCACATGTCACAGTAGCTGAATCCAAGATTGTTCTGCAGACGAGAAGTGAAGTTGATTTCTTAGATGATGGATATAAATGGCGAAAATATGGGCAGAAGGTGGTAAAGGGGACTCAGCATCCAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTACTATCGGTGCACATATCCTGGATGCAATGTCCGCAAACAAGTCGAGAGGGCTTCAACTGATCCAAAAGCTGTCATAACAACATATGAAGGCAAGCATAATCATGATATTCCTACTGTTAGTGTTAGGAATAGAGGAACAAGGAATAAATACAGCTAAAGATAGCGTTGAGAACGTAAGAAACAGTGTGAAGGCCTTCAGTTCACAAAAATATCTTGGTTTCTGAAAACAACAACAAAATTCCCTCGTGTGAAAACTGAAAGATTGCAGCATTAGTAGCATCAGGAAAAGTAGAAGGGTGAAAAGATGTGGNTTGAGCTTCTTACTTCTGTACAAAAAGCTTATTATATTATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E398658" ref_strand="+" ref_description="SGN-E398658 [TUS-44-N15]">
      <seq>cagaatttaaagatctttatatgtgcatatgattagtcattagaacaaacaagtgcagtaagatactctggagattaaaatcaagtgctataatcagctgcagcgtcttgtttgagcaatactagttctttgtccttccagaatatgtttatcacatgtgtcctgttcttttgctatatggcatcaataatccgcttgtgcatccacacttgatatacaggagttactatcggtgcacatatcctggatgcaatgtccgcaaacaagtcgagagggcttcaactgatccaaaagctgtcataacaacatatgaaggcaagcataatcatgatattcctactgttagtgttaggaatagaggaacaaggaataaatacagctaaagatagcgttgagaacgtaagaaacagtgtgaaggccttcagttcacaaaaatatcttggtttctgaaaacaacaacaaaattccctcgtgtgaaaactgaaagattgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="67497" stop="68588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67797" g_stop="68288" g_length="492"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="492" r_length="492" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E398658" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>492</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E398658" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67797" e_stop="68288"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGAATTTAAAGATCTTTATATGTGCATATGATTAGTCATTAGAACAAACAAGTGCAGTAAGATACTCTGGAGATTAAAATCAAGTGCTATAATCAGCTGCAGCGTCTTGTTTGAGCAATACTAGTTCTTTGTCCTTCCAGAATATGTTTATCACATGTGTCCTGTTCTTTTGCTATATGGCATCAATAATCCGCTTGTGCATCCACACTTGATATACAGGAGTTACTATCGGTGCACATATCCTGGATGCAATGTCCGCAAACAAGTCGAGAGGGCTTCAACTGATCCAAAAGCTGTCATAACAACATATGAAGGCAAGCATAATCATGATATTCCTACTGTTAGTGTTAGGAATAGAGGAACAAGGAATAAATACAGCTAAAGATAGCGTTGAGAACGTAAGAAACAGTGTGAAGGCCTTCAGTTCACAAAAATATCTTGGTTTCTGAAAACAACAACAAAATTCCCTCGTGTGAAAACTGAAAGATTGC</genome_strand>
        <mrna_strand>CAGAATTTAAAGATCTTTATATGTGCATATGATTAGTCATTAGAACAAACAAGTGCAGTAAGATACTCTGGAGATTAAAATCAAGTGCTATAATCAGCTGCAGCGTCTTGTTTGAGCAATACTAGTTCTTTGTCCTTCCAGAATATGTTTATCACATGTGTCCTGTTCTTTTGCTATATGGCATCAATAATCCGCTTGTGCATCCACACTTGATATACAGGAGTTACTATCGGTGCACATATCCTGGATGCAATGTCCGCAAACAAGTCGAGAGGGCTTCAACTGATCCAAAAGCTGTCATAACAACATATGAAGGCAAGCATAATCATGATATTCCTACTGTTAGTGTTAGGAATAGAGGAACAAGGAATAAATACAGCTAAAGATAGCGTTGAGAACGTAAGAAACAGTGTGAAGGCCTTCAGTTCACAAAAATATCTTGGTTTCTGAAAACAACAACAAAATTCCCTCGTGTGAAAACTGAAAGATTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E735877" ref_strand="+" ref_description="SGN-E735877 [LC03CA04]">
      <seq>cgttgcataacacgcaaagaaaagagaaggaatcccatctctctgttcttctccacctcaaactattacctcttttctcagatcaattttatgaaaacaattttttttttgcagatacaatgagctaatttggggagagaccctttttcccgcacccattattttcacctcccttgacccgttgaatcatacgggtcgatctgggtctctcccaactggatcgaattcatttatgggttttggggggtcatgggttgcgtcagctccaagcaggccacgtcccattccccgccccacgattcgtcggtgaatgttgccggtgtcgacaatgtcgatccattattgcatattggatttgcccctttggagaagatcaaagaggagcctgagaaagagggagaggattccgttagacgattttcggggaaattgaaagcatccaagaagggaaattctgataaaaaggcggctagttttagcatcaaatttggaaggttaactgaaggtgaacatttggccgccggatggcctgtttggctgactgccgttgccggtgaagctattgatggatggatgcctctgaaatcaaacatgttccagaaattagaaagattggacaaggtacatatagcagtgtttaccgagcacgtgatattggaaatggtaaaatggtcgccctgaagaaggtgcgatttgacaatttccaaccagatagtgtcagatttatggcacgagaaattgcaattctccgcaaacttgaccatccaaacattatgaagctggaagggataatcacttctcggttatcatgtagcatttaccttgtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="69139" stop="72945"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69435" g_stop="70046" g_length="612"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="611" r_length="611" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="70047" i_stop="72429" i_length="2383">
            <donor d_prob="0.965" d_score="0.98"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72430" g_stop="72645" g_length="216"/>
          <reference_exon_boundary r_type="cDNA" r_start="612" r_stop="827" r_length="216" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E735877" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>828</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E735877" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69435" e_stop="70046"/>
          <exon e_start="72430" e_stop="72645"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCCGCATAACACGCAAAGAAAAGAGAAGGAATCCCATCTCTCTGTTCTTCTCCACCTCAAACTATTACCTCTTTTCTCAGATCAATTTTATGAAAACAATTTTTTTTTTGCAGATACAATGAGCTAATTTGGGGAGAGACCCTTTTTCCCGCACCCATTATTTTCACCTCCCTTGACCCGTTGAATCATACGGGTCGATCTGGGTCTCTCCCAACTGGATCGAATTCATTTATGGGTTTTGGGGGGTCATGGGTTGCGTCAGCTCCAAGCAGGCCACGTCCCATTCCCCGCCCCACGATTCGTCGGTGAATGTTGCCGGTGTCGACAATGTCGATCCATTATTGCATATTGGATTTGCCCCTTTGGAGAAGATCAAAGAGGAGCCTGAGAAAGAGGGAGAGGATTCCGTTAGACGATTTTCGGGGAAATTGAGAGCATCCAAGAAGGGAAATTCTGATAAGAAGGCGGCTAGTTTTAGCATCAAATTTGGAAGGTTAACTGAAGGTGAACATTTGGCCGCCGGATGGCCTGTTTGGCTGACTGCCGTTGCCGGTGAAGCTATTGATGGATGGATGCCTCTGAAATCAAACATGTTCCAGAAATTAGAAAAGGTAACCAATGTTTCCCTAAAAAAGATATGATTCCTCGTATTATCTGGACAGATTCTTGATTTTACAAATTTGTATTCATGTGTGTATGCAACATAAAAAGGTTATCCTTTCAATAGCAGTTCCATTACTTTTCTCCCATTCCGTTGCAGAAGGAAAAGACACCATTGCAAACATTTACCCCAAAAAGATGAATATTGTGGTGCTTCATGCCATCATTAACTCCTGCATTCGCCATTTATAGATTAGGTATTACTTCAAGTCATGGTCTCCATTTTACTGTAATCAATCATGTAAGGAAAGCTTACTGACAGAATCTAAGGGAATCTAGTTAAATCATTAAAATCTCGGCTTTAATCATAGTTTGACAATTTTTACACTGGCATCAACCTTCCATTACCTTCCTCTTTAGGATTTGTCTATGTCTTGAAACACATGTAGGCGAGGTTATCCAATATTGGTTGATGCATTTAATACGGAGCAGCTAGATACAGAAGATTTTTATGGTTGATGCAAAACTAATTTGGGAATGACGCATAGTTTATAAATTGAAAATCTTCAGCTTTTCTATCAAGGTTATTTTTGATGAATAAGTGTCTGAGAGAAATCTGCACCACATCATGCTTTCTCATCAGTTCCTACTCAATCATCAGCCTTTCAATTTGAGTAATTGGCTAAAAATTCTGTGCATGTTTTAGCAAGTTTTGTTAGCTGAGACTATAAATTACCATTTCTTTAACCCCTCTCATGGTACCATTTTAATGAACTTGATACTCCCCAAAGGAGGAAACCTTTATTTTTTCTGCTTTTACTTGCCATCCTTATCTTTCAATCTGAACTTGCATGTGATCCACTTGCTACTTCCAATTATGAGGAACTACAAGGTCTATAATAAACTGAAAATACCTTTTAATTTTTCTTTACTTGTATCTTTGTTCCCTTATGTTACCTCTGGAGAAAGAGAAGCTTATAGTCGAGAGTTATTAATCTGAAGAAAAACGTAGAGATATTATAAGTGCGAGATAGATTCGAATCTGAGCTGGGATATAGGTGATATGGTTTATAACTTAATATTGAGGAATTTAGCAACATATCTAGACTTTGGCTGCTTAGTGTTGGGTTTTATTTGCCCTAAATTTCTTACCATAAATAGGTTTTCCTTGTAGGAAAAGGTTTTGGATTGACTAATCTTTTTCTTGTAGGAAAAGGTTTAGGACTCTATAAATAGAGGCATGTTCCTTCTAACTTAATCAGCATTCACAATGTAGTCTTAAGAGCTTTAAGAGTTTTGGTTAGGGGGAGAATTTGTGGGTCACAAGCTTGATATGTTATCACTTGTGTGAACCTCCCATGTATTCCGAGTGAATTGGTTGAGGTTGTTTCTCTCTATATTTTGTACTCTCATATTTATAGTGGATTGCTCATCTCCTTTGTGGACGTAGGTCGATTGACCGAACCACGTTAAATCTCTGTGTCTTTTGGTATATTTCTCGTTGTCTTCTTACTCGTGGTCTTTCGAGGTTTGCTTCGCTAGCTTCCGCATTTACACCTGCTTATTTCCGGTCCTAACAAGTGGTATCAGAGCCAAATTCAATAACGAAGTCAGGTTCAGTGGTTCGATAATCGATGATTAAACCAGGTTAGAAAGATGTGTTCATCTAGGCGGTGTAGTTCTAGCAGTAACCTTTTTGACAGTAATGAAGATTTTGTTGGAGAAATTGTTTCAGAGAGATTCTTTATGTTGAGACATAAATTTTGCAAAGGAGATTATGGAGAGGAGAAGCAAGTTGTTGAAGATTAAGTCAAGAAGGTGGACAAATTTATTTTGTCAGAAATTCAGGCCAAGGGGGAGATTTGTTGGGTTTTATTTGCCTTAAATTTCCTACCATAAATAGGTTTTCCTTGTAGGAAAAGGATTTGGGTACTCTATAAATAGAGGCATGTTCCTTCTAACTTAATCAGCATTCACAATGTAGTCTTAAGAGCTTTGAGAGTTTTGGTTAGGGGAAGAATTTGTGGGTCACAAGCTTGATATGTTATCACTTGTGTGAACCTCCCATGTATTCCGAGTGAATTGGTTGAGGTCGTTTCCCTCTGTATTTATACTCTCATATTTATAGTGGATTGTTCATCTCCTTTCTGGACGTAGGTCGATTGACCAAACCACGTTAAATCTCTGTGTCTTTTGGTATATTTATAGTTGTTTTCTTACTCGTGGTCTTTCGAGGTTTGCTTTGCTAGCTTCCGCATTTAAACCTGCTTATTTCCGGTCCTAACACTTAGTTCAATACTTAGCTTTGTCTGGTAATTTTAGTGGTACATTATCTCCCTACTGATGTAAATTATTTTCTTCTTACGAAGATTCTTTCTTTTTCAACATCTGTAGATTGGACAAGGTACATATAGCAGTGTTTACCGAGCACGTGATATTGGAAATGGTAAAATGGTCGCCCTGAAGAAGGTGCGATTTGACAATTTCCAACCAGATAGTGTCAGATTTATGGCACGAGAAATTGCAATTCTCCGCAAACTTGACCATCCAAACATTATGAAGCTGGAAGGGATAATCACTTCTCGGTTATCATGTAGCATTTACCTTGTT</genome_strand>
        <mrna_strand>CGTTGCATAACACGCAAAGAAAAGAGAAGGAATCCCATCTCTCTGTTCTTCTCCACCTCAAACTATTACCTCTTTTCTCAGATCAATTTTATGAAAACAATTTTTTTTTTGCAGATACAATGAGCTAATTTGGGGAGAGACCCTTTTTCCCGCACCCATTATTTTCACCTCCCTTGACCCGTTGAATCATACGGGTCGATCTGGGTCTCTCCCAACTGGATCGAATTCATTTATGGGTTTTGGGGGGTCATGGGTTGCGTCAGCTCCAAGCAGGCCACGTCCCATTCCCCGCCCCACGATTCGTCGGTGAATGTTGCCGGTGTCGACAATGTCGATCCATTATTGCATATTGGATTTGCCCCTTTGGAGAAGATCAAAGAGGAGCCTGAGAAAGAGGGAGAGGATTCCGTTAGACGATTTTCGGGGAAATTGAAAGCATCCAAGAAGGGAAATTCTGATAAAAAGGCGGCTAGTTTTAGCATCAAATTTGGAAGGTTAACTGAAGGTGAACATTTGGCCGCCGGATGGCCTGTTTGGCTGACTGCCGTTGCCGGTGAAGCTATTGATGGATGGATGCCTCTGAAATCAAACATGTTCCAGAAATTAG-AAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGACAAGGTACATATAGCAGTGTTTACCGAGCACGTGATATTGGAAATGGTAAAATGGTCGCCCTGAAGAAGGTGCGATTTGACAATTTCCAACCAGATAGTGTCAGATTTATGGCACGAGAAATTGCAATTCTCCGCAAACTTGACCATCCAAACATTATGAAGCTGGAAGGGATAATCACTTCTCGGTTATCATGTAGCATTTACCTTGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E740899" ref_strand="+" ref_description="SGN-E740899 [LC23BE06]">
      <seq>ctttacaacacacaaagaaaagagaaggaatcccatctctctgttcttctccacctcaaactattaaatcttttctcaaatcaattttatgaaaacaattttttttttgcaaatacaatgagctaatttggggagagaccctttttcccgcacccattattttcacctcccttgacccgttgaatcatacgggtcgatctgggtctctcccaactggatcgaattcatttatgggttttggggggtcatgggttgcgtcagctccaagcaggccacgtcccattccccgccccacaattcgtcggtgaatgttgccggtgtcgacaatgtcgatccattattgcatattggatttgcccctttggagaagatcaaagaggaccctgagaaagagggagaggattccgttagacgattttcggggaaattgagagcatccaagaagggaaattctgataagaaggcggctagttttagcatcaaatttggaaggttaactgaaggtgaacatttggccgccggatggcctgtttggctgactgccgttgccggtgaagctattgatggatggatgcctctgaaatcaaacatgttccagaaattagaaagattggacaaggtacatatagcagtgtttaccgagcacgtgatattggaaatggtaaaatggtcgccctgaaaaaggtgcgatttgacaatttccaaccagatagtgtcagatttatggcacgagaaattgcaattctccgcaaacttgaccatccaaacattatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="69141" stop="72895"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69437" g_stop="70046" g_length="610"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="609" r_length="609" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="70047" i_stop="72429" i_length="2383">
            <donor d_prob="0.965" d_score="0.98"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72430" g_stop="72595" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="610" r_stop="775" r_length="166" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E740899" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>776</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E740899" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69437" e_stop="70046"/>
          <exon e_start="72430" e_stop="72595"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGCATAACACGCAAAGAAAAGAGAAGGAATCCCATCTCTCTGTTCTTCTCCACCTCAAACTATTACCTCTTTTCTCAGATCAATTTTATGAAAACAATTTTTTTTTTGCAGATACAATGAGCTAATTTGGGGAGAGACCCTTTTTCCCGCACCCATTATTTTCACCTCCCTTGACCCGTTGAATCATACGGGTCGATCTGGGTCTCTCCCAACTGGATCGAATTCATTTATGGGTTTTGGGGGGTCATGGGTTGCGTCAGCTCCAAGCAGGCCACGTCCCATTCCCCGCCCCACGATTCGTCGGTGAATGTTGCCGGTGTCGACAATGTCGATCCATTATTGCATATTGGATTTGCCCCTTTGGAGAAGATCAAAGAGGAGCCTGAGAAAGAGGGAGAGGATTCCGTTAGACGATTTTCGGGGAAATTGAGAGCATCCAAGAAGGGAAATTCTGATAAGAAGGCGGCTAGTTTTAGCATCAAATTTGGAAGGTTAACTGAAGGTGAACATTTGGCCGCCGGATGGCCTGTTTGGCTGACTGCCGTTGCCGGTGAAGCTATTGATGGATGGATGCCTCTGAAATCAAACATGTTCCAGAAATTAGAAAAGGTAACCAATGTTTCCCTAAAAAAGATATGATTCCTCGTATTATCTGGACAGATTCTTGATTTTACAAATTTGTATTCATGTGTGTATGCAACATAAAAAGGTTATCCTTTCAATAGCAGTTCCATTACTTTTCTCCCATTCCGTTGCAGAAGGAAAAGACACCATTGCAAACATTTACCCCAAAAAGATGAATATTGTGGTGCTTCATGCCATCATTAACTCCTGCATTCGCCATTTATAGATTAGGTATTACTTCAAGTCATGGTCTCCATTTTACTGTAATCAATCATGTAAGGAAAGCTTACTGACAGAATCTAAGGGAATCTAGTTAAATCATTAAAATCTCGGCTTTAATCATAGTTTGACAATTTTTACACTGGCATCAACCTTCCATTACCTTCCTCTTTAGGATTTGTCTATGTCTTGAAACACATGTAGGCGAGGTTATCCAATATTGGTTGATGCATTTAATACGGAGCAGCTAGATACAGAAGATTTTTATGGTTGATGCAAAACTAATTTGGGAATGACGCATAGTTTATAAATTGAAAATCTTCAGCTTTTCTATCAAGGTTATTTTTGATGAATAAGTGTCTGAGAGAAATCTGCACCACATCATGCTTTCTCATCAGTTCCTACTCAATCATCAGCCTTTCAATTTGAGTAATTGGCTAAAAATTCTGTGCATGTTTTAGCAAGTTTTGTTAGCTGAGACTATAAATTACCATTTCTTTAACCCCTCTCATGGTACCATTTTAATGAACTTGATACTCCCCAAAGGAGGAAACCTTTATTTTTTCTGCTTTTACTTGCCATCCTTATCTTTCAATCTGAACTTGCATGTGATCCACTTGCTACTTCCAATTATGAGGAACTACAAGGTCTATAATAAACTGAAAATACCTTTTAATTTTTCTTTACTTGTATCTTTGTTCCCTTATGTTACCTCTGGAGAAAGAGAAGCTTATAGTCGAGAGTTATTAATCTGAAGAAAAACGTAGAGATATTATAAGTGCGAGATAGATTCGAATCTGAGCTGGGATATAGGTGATATGGTTTATAACTTAATATTGAGGAATTTAGCAACATATCTAGACTTTGGCTGCTTAGTGTTGGGTTTTATTTGCCCTAAATTTCTTACCATAAATAGGTTTTCCTTGTAGGAAAAGGTTTTGGATTGACTAATCTTTTTCTTGTAGGAAAAGGTTTAGGACTCTATAAATAGAGGCATGTTCCTTCTAACTTAATCAGCATTCACAATGTAGTCTTAAGAGCTTTAAGAGTTTTGGTTAGGGGGAGAATTTGTGGGTCACAAGCTTGATATGTTATCACTTGTGTGAACCTCCCATGTATTCCGAGTGAATTGGTTGAGGTTGTTTCTCTCTATATTTTGTACTCTCATATTTATAGTGGATTGCTCATCTCCTTTGTGGACGTAGGTCGATTGACCGAACCACGTTAAATCTCTGTGTCTTTTGGTATATTTCTCGTTGTCTTCTTACTCGTGGTCTTTCGAGGTTTGCTTCGCTAGCTTCCGCATTTACACCTGCTTATTTCCGGTCCTAACAAGTGGTATCAGAGCCAAATTCAATAACGAAGTCAGGTTCAGTGGTTCGATAATCGATGATTAAACCAGGTTAGAAAGATGTGTTCATCTAGGCGGTGTAGTTCTAGCAGTAACCTTTTTGACAGTAATGAAGATTTTGTTGGAGAAATTGTTTCAGAGAGATTCTTTATGTTGAGACATAAATTTTGCAAAGGAGATTATGGAGAGGAGAAGCAAGTTGTTGAAGATTAAGTCAAGAAGGTGGACAAATTTATTTTGTCAGAAATTCAGGCCAAGGGGGAGATTTGTTGGGTTTTATTTGCCTTAAATTTCCTACCATAAATAGGTTTTCCTTGTAGGAAAAGGATTTGGGTACTCTATAAATAGAGGCATGTTCCTTCTAACTTAATCAGCATTCACAATGTAGTCTTAAGAGCTTTGAGAGTTTTGGTTAGGGGAAGAATTTGTGGGTCACAAGCTTGATATGTTATCACTTGTGTGAACCTCCCATGTATTCCGAGTGAATTGGTTGAGGTCGTTTCCCTCTGTATTTATACTCTCATATTTATAGTGGATTGTTCATCTCCTTTCTGGACGTAGGTCGATTGACCAAACCACGTTAAATCTCTGTGTCTTTTGGTATATTTATAGTTGTTTTCTTACTCGTGGTCTTTCGAGGTTTGCTTTGCTAGCTTCCGCATTTAAACCTGCTTATTTCCGGTCCTAACACTTAGTTCAATACTTAGCTTTGTCTGGTAATTTTAGTGGTACATTATCTCCCTACTGATGTAAATTATTTTCTTCTTACGAAGATTCTTTCTTTTTCAACATCTGTAGATTGGACAAGGTACATATAGCAGTGTTTACCGAGCACGTGATATTGGAAATGGTAAAATGGTCGCCCTGAAGAAGGTGCGATTTGACAATTTCCAACCAGATAGTGTCAGATTTATGGCACGAGAAATTGCAATTCTCCGCAAACTTGACCATCCAAACATTATGA</genome_strand>
        <mrna_strand>CTTTACAACACACAAAGAAAAGAGAAGGAATCCCATCTCTCTGTTCTTCTCCACCTCAAACTATTAAATCTTTTCTCAAATCAATTTTATGAAAACAATTTTTTTTTTGCAAATACAATGAGCTAATTTGGGGAGAGACCCTTTTTCCCGCACCCATTATTTTCACCTCCCTTGACCCGTTGAATCATACGGGTCGATCTGGGTCTCTCCCAACTGGATCGAATTCATTTATGGGTTTTGGGGGGTCATGGGTTGCGTCAGCTCCAAGCAGGCCACGTCCCATTCCCCGCCCCACAATTCGTCGGTGAATGTTGCCGGTGTCGACAATGTCGATCCATTATTGCATATTGGATTTGCCCCTTTGGAGAAGATCAAAGAGGACCCTGAGAAAGAGGGAGAGGATTCCGTTAGACGATTTTCGGGGAAATTGAGAGCATCCAAGAAGGGAAATTCTGATAAGAAGGCGGCTAGTTTTAGCATCAAATTTGGAAGGTTAACTGAAGGTGAACATTTGGCCGCCGGATGGCCTGTTTGGCTGACTGCCGTTGCCGGTGAAGCTATTGATGGATGGATGCCTCTGAAATCAAACATGTTCCAGAAATTAG-AAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGACAAGGTACATATAGCAGTGTTTACCGAGCACGTGATATTGGAAATGGTAAAATGGTCGCCCTGAAAAAGGTGCGATTTGACAATTTCCAACCAGATAGTGTCAGATTTATGGCACGAGAAATTGCAATTCTCCGCAAACTTGACCATCCAAACATTATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E736643" ref_strand="+" ref_description="SGN-E736643 [LC06CD04]">
      <seq>ccgtataacacgcaaagaaaagagaaggaatcccatctctctgttcttctccacctcaaactattacctcttttctcagatcaattttatgaaaacaattttttttttgcagatacaatgagctaatttggggagagaccctttttcccgcacccattattttcacctcccttgacccgttgaatcatacgggtcgatctgggtctctcccaactggatcgaattcatttatgggttttggggggtcatgggttgcgtcagctccaagcaggccacgtcccattccccgccccacgattcgtcggtgaatgttgccggtgtcgacaatgtcgatccattattgcatattggatttgcccctttggagaagatcaaagaggagcctgagaaagagggagaggattccgttagacgattttcggggaaattgagagcatccaagaagggaaattctgataagaaggcggctagttttagcatcaaatttggaaggttaactgaaggtgaacatttggccgccggatggcctgtttggctgactgccgttgccggtgaagctattgatggatggatgcctctgaaatcaaacatgttccagaaattagaaagattggacaaggtacatatagcagtgtttaccgagcacgtgatattggaaatggtaaaatggtcgccctgaagaaggtgcgatttgacaatttccaaccagatagtgtcagatttatggcacgagaaattgcaattctccgcaaacttga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="69137" stop="72878"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69437" g_stop="70046" g_length="610"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="609" r_length="609" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="70047" i_stop="72429" i_length="2383">
            <donor d_prob="0.965" d_score="0.98"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72430" g_stop="72578" g_length="149"/>
          <reference_exon_boundary r_type="cDNA" r_start="610" r_stop="758" r_length="149" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E736643" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>759</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E736643" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69437" e_stop="70046"/>
          <exon e_start="72430" e_stop="72578"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGCATAACACGCAAAGAAAAGAGAAGGAATCCCATCTCTCTGTTCTTCTCCACCTCAAACTATTACCTCTTTTCTCAGATCAATTTTATGAAAACAATTTTTTTTTTGCAGATACAATGAGCTAATTTGGGGAGAGACCCTTTTTCCCGCACCCATTATTTTCACCTCCCTTGACCCGTTGAATCATACGGGTCGATCTGGGTCTCTCCCAACTGGATCGAATTCATTTATGGGTTTTGGGGGGTCATGGGTTGCGTCAGCTCCAAGCAGGCCACGTCCCATTCCCCGCCCCACGATTCGTCGGTGAATGTTGCCGGTGTCGACAATGTCGATCCATTATTGCATATTGGATTTGCCCCTTTGGAGAAGATCAAAGAGGAGCCTGAGAAAGAGGGAGAGGATTCCGTTAGACGATTTTCGGGGAAATTGAGAGCATCCAAGAAGGGAAATTCTGATAAGAAGGCGGCTAGTTTTAGCATCAAATTTGGAAGGTTAACTGAAGGTGAACATTTGGCCGCCGGATGGCCTGTTTGGCTGACTGCCGTTGCCGGTGAAGCTATTGATGGATGGATGCCTCTGAAATCAAACATGTTCCAGAAATTAGAAAAGGTAACCAATGTTTCCCTAAAAAAGATATGATTCCTCGTATTATCTGGACAGATTCTTGATTTTACAAATTTGTATTCATGTGTGTATGCAACATAAAAAGGTTATCCTTTCAATAGCAGTTCCATTACTTTTCTCCCATTCCGTTGCAGAAGGAAAAGACACCATTGCAAACATTTACCCCAAAAAGATGAATATTGTGGTGCTTCATGCCATCATTAACTCCTGCATTCGCCATTTATAGATTAGGTATTACTTCAAGTCATGGTCTCCATTTTACTGTAATCAATCATGTAAGGAAAGCTTACTGACAGAATCTAAGGGAATCTAGTTAAATCATTAAAATCTCGGCTTTAATCATAGTTTGACAATTTTTACACTGGCATCAACCTTCCATTACCTTCCTCTTTAGGATTTGTCTATGTCTTGAAACACATGTAGGCGAGGTTATCCAATATTGGTTGATGCATTTAATACGGAGCAGCTAGATACAGAAGATTTTTATGGTTGATGCAAAACTAATTTGGGAATGACGCATAGTTTATAAATTGAAAATCTTCAGCTTTTCTATCAAGGTTATTTTTGATGAATAAGTGTCTGAGAGAAATCTGCACCACATCATGCTTTCTCATCAGTTCCTACTCAATCATCAGCCTTTCAATTTGAGTAATTGGCTAAAAATTCTGTGCATGTTTTAGCAAGTTTTGTTAGCTGAGACTATAAATTACCATTTCTTTAACCCCTCTCATGGTACCATTTTAATGAACTTGATACTCCCCAAAGGAGGAAACCTTTATTTTTTCTGCTTTTACTTGCCATCCTTATCTTTCAATCTGAACTTGCATGTGATCCACTTGCTACTTCCAATTATGAGGAACTACAAGGTCTATAATAAACTGAAAATACCTTTTAATTTTTCTTTACTTGTATCTTTGTTCCCTTATGTTACCTCTGGAGAAAGAGAAGCTTATAGTCGAGAGTTATTAATCTGAAGAAAAACGTAGAGATATTATAAGTGCGAGATAGATTCGAATCTGAGCTGGGATATAGGTGATATGGTTTATAACTTAATATTGAGGAATTTAGCAACATATCTAGACTTTGGCTGCTTAGTGTTGGGTTTTATTTGCCCTAAATTTCTTACCATAAATAGGTTTTCCTTGTAGGAAAAGGTTTTGGATTGACTAATCTTTTTCTTGTAGGAAAAGGTTTAGGACTCTATAAATAGAGGCATGTTCCTTCTAACTTAATCAGCATTCACAATGTAGTCTTAAGAGCTTTAAGAGTTTTGGTTAGGGGGAGAATTTGTGGGTCACAAGCTTGATATGTTATCACTTGTGTGAACCTCCCATGTATTCCGAGTGAATTGGTTGAGGTTGTTTCTCTCTATATTTTGTACTCTCATATTTATAGTGGATTGCTCATCTCCTTTGTGGACGTAGGTCGATTGACCGAACCACGTTAAATCTCTGTGTCTTTTGGTATATTTCTCGTTGTCTTCTTACTCGTGGTCTTTCGAGGTTTGCTTCGCTAGCTTCCGCATTTACACCTGCTTATTTCCGGTCCTAACAAGTGGTATCAGAGCCAAATTCAATAACGAAGTCAGGTTCAGTGGTTCGATAATCGATGATTAAACCAGGTTAGAAAGATGTGTTCATCTAGGCGGTGTAGTTCTAGCAGTAACCTTTTTGACAGTAATGAAGATTTTGTTGGAGAAATTGTTTCAGAGAGATTCTTTATGTTGAGACATAAATTTTGCAAAGGAGATTATGGAGAGGAGAAGCAAGTTGTTGAAGATTAAGTCAAGAAGGTGGACAAATTTATTTTGTCAGAAATTCAGGCCAAGGGGGAGATTTGTTGGGTTTTATTTGCCTTAAATTTCCTACCATAAATAGGTTTTCCTTGTAGGAAAAGGATTTGGGTACTCTATAAATAGAGGCATGTTCCTTCTAACTTAATCAGCATTCACAATGTAGTCTTAAGAGCTTTGAGAGTTTTGGTTAGGGGAAGAATTTGTGGGTCACAAGCTTGATATGTTATCACTTGTGTGAACCTCCCATGTATTCCGAGTGAATTGGTTGAGGTCGTTTCCCTCTGTATTTATACTCTCATATTTATAGTGGATTGTTCATCTCCTTTCTGGACGTAGGTCGATTGACCAAACCACGTTAAATCTCTGTGTCTTTTGGTATATTTATAGTTGTTTTCTTACTCGTGGTCTTTCGAGGTTTGCTTTGCTAGCTTCCGCATTTAAACCTGCTTATTTCCGGTCCTAACACTTAGTTCAATACTTAGCTTTGTCTGGTAATTTTAGTGGTACATTATCTCCCTACTGATGTAAATTATTTTCTTCTTACGAAGATTCTTTCTTTTTCAACATCTGTAGATTGGACAAGGTACATATAGCAGTGTTTACCGAGCACGTGATATTGGAAATGGTAAAATGGTCGCCCTGAAGAAGGTGCGATTTGACAATTTCCAACCAGATAGTGTCAGATTTATGGCACGAGAAATTGCAATTCTCCGCAAACTTGA</genome_strand>
        <mrna_strand>CCGTATAACACGCAAAGAAAAGAGAAGGAATCCCATCTCTCTGTTCTTCTCCACCTCAAACTATTACCTCTTTTCTCAGATCAATTTTATGAAAACAATTTTTTTTTTGCAGATACAATGAGCTAATTTGGGGAGAGACCCTTTTTCCCGCACCCATTATTTTCACCTCCCTTGACCCGTTGAATCATACGGGTCGATCTGGGTCTCTCCCAACTGGATCGAATTCATTTATGGGTTTTGGGGGGTCATGGGTTGCGTCAGCTCCAAGCAGGCCACGTCCCATTCCCCGCCCCACGATTCGTCGGTGAATGTTGCCGGTGTCGACAATGTCGATCCATTATTGCATATTGGATTTGCCCCTTTGGAGAAGATCAAAGAGGAGCCTGAGAAAGAGGGAGAGGATTCCGTTAGACGATTTTCGGGGAAATTGAGAGCATCCAAGAAGGGAAATTCTGATAAGAAGGCGGCTAGTTTTAGCATCAAATTTGGAAGGTTAACTGAAGGTGAACATTTGGCCGCCGGATGGCCTGTTTGGCTGACTGCCGTTGCCGGTGAAGCTATTGATGGATGGATGCCTCTGAAATCAAACATGTTCCAGAAATTAG-AAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGACAAGGTACATATAGCAGTGTTTACCGAGCACGTGATATTGGAAATGGTAAAATGGTCGCCCTGAAGAAGGTGCGATTTGACAATTTCCAACCAGATAGTGTCAGATTTATGGCACGAGAAATTGCAATTCTCCGCAAACTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E331051" ref_strand="+" ref_description="SGN-E331051 [cTOD-6-O19]">
      <seq>cctttttcccgcacccattattttcacctcccttgacccgttgaatcatacgggtcgatctgggtctctcccaactggatcgaattcatttatgggttttggggggtcatgggttgcgtcagctccaagcaggccacgtaccattccccgccccacgattcgtcggtgaatgttgccggtgtcgacaatgtcgatccattattgcatattggatttgcccctttggagaagatcaaagaggagcctgagaaagagggagaggattccgttagacgattttcggggaaattgagagcatccaagaagggaaattctgatcagaaggcggctagttttagcatcaaatttggaaggttaactgaaggtgaacatttggccgccggatggcctgtttggctgactgccgttgccggagaagctattgatggatggatgcctctgaaatcaaacatgttccagacattagaaaagattggacaaggtacatatagcagagtttaccgagcacgtgatattgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="69276" stop="72777"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69576" g_stop="70046" g_length="471"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="471" r_length="471" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="70047" i_stop="72429" i_length="2383">
            <donor d_prob="0.965" d_score="0.98"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72430" g_stop="72477" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="472" r_stop="519" r_length="48" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E331051" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>519</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E331051" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69576" e_stop="70046"/>
          <exon e_start="72430" e_stop="72477"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTTTTTCCCGCACCCATTATTTTCACCTCCCTTGACCCGTTGAATCATACGGGTCGATCTGGGTCTCTCCCAACTGGATCGAATTCATTTATGGGTTTTGGGGGGTCATGGGTTGCGTCAGCTCCAAGCAGGCCACGTCCCATTCCCCGCCCCACGATTCGTCGGTGAATGTTGCCGGTGTCGACAATGTCGATCCATTATTGCATATTGGATTTGCCCCTTTGGAGAAGATCAAAGAGGAGCCTGAGAAAGAGGGAGAGGATTCCGTTAGACGATTTTCGGGGAAATTGAGAGCATCCAAGAAGGGAAATTCTGATAAGAAGGCGGCTAGTTTTAGCATCAAATTTGGAAGGTTAACTGAAGGTGAACATTTGGCCGCCGGATGGCCTGTTTGGCTGACTGCCGTTGCCGGTGAAGCTATTGATGGATGGATGCCTCTGAAATCAAACATGTTCCAGAAATTAGAAAAGGTAACCAATGTTTCCCTAAAAAAGATATGATTCCTCGTATTATCTGGACAGATTCTTGATTTTACAAATTTGTATTCATGTGTGTATGCAACATAAAAAGGTTATCCTTTCAATAGCAGTTCCATTACTTTTCTCCCATTCCGTTGCAGAAGGAAAAGACACCATTGCAAACATTTACCCCAAAAAGATGAATATTGTGGTGCTTCATGCCATCATTAACTCCTGCATTCGCCATTTATAGATTAGGTATTACTTCAAGTCATGGTCTCCATTTTACTGTAATCAATCATGTAAGGAAAGCTTACTGACAGAATCTAAGGGAATCTAGTTAAATCATTAAAATCTCGGCTTTAATCATAGTTTGACAATTTTTACACTGGCATCAACCTTCCATTACCTTCCTCTTTAGGATTTGTCTATGTCTTGAAACACATGTAGGCGAGGTTATCCAATATTGGTTGATGCATTTAATACGGAGCAGCTAGATACAGAAGATTTTTATGGTTGATGCAAAACTAATTTGGGAATGACGCATAGTTTATAAATTGAAAATCTTCAGCTTTTCTATCAAGGTTATTTTTGATGAATAAGTGTCTGAGAGAAATCTGCACCACATCATGCTTTCTCATCAGTTCCTACTCAATCATCAGCCTTTCAATTTGAGTAATTGGCTAAAAATTCTGTGCATGTTTTAGCAAGTTTTGTTAGCTGAGACTATAAATTACCATTTCTTTAACCCCTCTCATGGTACCATTTTAATGAACTTGATACTCCCCAAAGGAGGAAACCTTTATTTTTTCTGCTTTTACTTGCCATCCTTATCTTTCAATCTGAACTTGCATGTGATCCACTTGCTACTTCCAATTATGAGGAACTACAAGGTCTATAATAAACTGAAAATACCTTTTAATTTTTCTTTACTTGTATCTTTGTTCCCTTATGTTACCTCTGGAGAAAGAGAAGCTTATAGTCGAGAGTTATTAATCTGAAGAAAAACGTAGAGATATTATAAGTGCGAGATAGATTCGAATCTGAGCTGGGATATAGGTGATATGGTTTATAACTTAATATTGAGGAATTTAGCAACATATCTAGACTTTGGCTGCTTAGTGTTGGGTTTTATTTGCCCTAAATTTCTTACCATAAATAGGTTTTCCTTGTAGGAAAAGGTTTTGGATTGACTAATCTTTTTCTTGTAGGAAAAGGTTTAGGACTCTATAAATAGAGGCATGTTCCTTCTAACTTAATCAGCATTCACAATGTAGTCTTAAGAGCTTTAAGAGTTTTGGTTAGGGGGAGAATTTGTGGGTCACAAGCTTGATATGTTATCACTTGTGTGAACCTCCCATGTATTCCGAGTGAATTGGTTGAGGTTGTTTCTCTCTATATTTTGTACTCTCATATTTATAGTGGATTGCTCATCTCCTTTGTGGACGTAGGTCGATTGACCGAACCACGTTAAATCTCTGTGTCTTTTGGTATATTTCTCGTTGTCTTCTTACTCGTGGTCTTTCGAGGTTTGCTTCGCTAGCTTCCGCATTTACACCTGCTTATTTCCGGTCCTAACAAGTGGTATCAGAGCCAAATTCAATAACGAAGTCAGGTTCAGTGGTTCGATAATCGATGATTAAACCAGGTTAGAAAGATGTGTTCATCTAGGCGGTGTAGTTCTAGCAGTAACCTTTTTGACAGTAATGAAGATTTTGTTGGAGAAATTGTTTCAGAGAGATTCTTTATGTTGAGACATAAATTTTGCAAAGGAGATTATGGAGAGGAGAAGCAAGTTGTTGAAGATTAAGTCAAGAAGGTGGACAAATTTATTTTGTCAGAAATTCAGGCCAAGGGGGAGATTTGTTGGGTTTTATTTGCCTTAAATTTCCTACCATAAATAGGTTTTCCTTGTAGGAAAAGGATTTGGGTACTCTATAAATAGAGGCATGTTCCTTCTAACTTAATCAGCATTCACAATGTAGTCTTAAGAGCTTTGAGAGTTTTGGTTAGGGGAAGAATTTGTGGGTCACAAGCTTGATATGTTATCACTTGTGTGAACCTCCCATGTATTCCGAGTGAATTGGTTGAGGTCGTTTCCCTCTGTATTTATACTCTCATATTTATAGTGGATTGTTCATCTCCTTTCTGGACGTAGGTCGATTGACCAAACCACGTTAAATCTCTGTGTCTTTTGGTATATTTATAGTTGTTTTCTTACTCGTGGTCTTTCGAGGTTTGCTTTGCTAGCTTCCGCATTTAAACCTGCTTATTTCCGGTCCTAACACTTAGTTCAATACTTAGCTTTGTCTGGTAATTTTAGTGGTACATTATCTCCCTACTGATGTAAATTATTTTCTTCTTACGAAGATTCTTTCTTTTTCAACATCTGTAGATTGGACAAGGTACATATAGCAGTGTTTACCGAGCACGTGATATTGGA</genome_strand>
        <mrna_strand>CCTTTTTCCCGCACCCATTATTTTCACCTCCCTTGACCCGTTGAATCATACGGGTCGATCTGGGTCTCTCCCAACTGGATCGAATTCATTTATGGGTTTTGGGGGGTCATGGGTTGCGTCAGCTCCAAGCAGGCCACGTACCATTCCCCGCCCCACGATTCGTCGGTGAATGTTGCCGGTGTCGACAATGTCGATCCATTATTGCATATTGGATTTGCCCCTTTGGAGAAGATCAAAGAGGAGCCTGAGAAAGAGGGAGAGGATTCCGTTAGACGATTTTCGGGGAAATTGAGAGCATCCAAGAAGGGAAATTCTGATCAGAAGGCGGCTAGTTTTAGCATCAAATTTGGAAGGTTAACTGAAGGTGAACATTTGGCCGCCGGATGGCCTGTTTGGCTGACTGCCGTTGCCGGAGAAGCTATTGATGGATGGATGCCTCTGAAATCAAACATGTTCCAGACATTAGAAAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGACAAGGTACATATAGCAGAGTTTACCGAGCACGTGATATTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E395024" ref_strand="+" ref_description="SGN-E395024 [TUS-40-H4]">
      <seq>ggtcgatctgggtctctcccaactggatcgaattcatttatgggttttggggggtcatgggttgcgtcagctccattcaggccacgtcccattccccgccccacgattcgtcggtgaatgttgccggtgtcgacaatgtcgatccattattgcatattggatttgcccctttggagaagatcaaagaggagcctgagaaagagggagaggattccgttatacgattttcgggaaaattgatacca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="69328" stop="70172"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69628" g_stop="69872" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="245" r_length="245" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E395024" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>245</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E395024" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69628" e_stop="69872"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTCGATCTGGGTCTCTCCCAACTGGATCGAATTCATTTATGGGTTTTGGGGGGTCATGGGTTGCGTCAGCTCCAAGCAGGCCACGTCCCATTCCCCGCCCCACGATTCGTCGGTGAATGTTGCCGGTGTCGACAATGTCGATCCATTATTGCATATTGGATTTGCCCCTTTGGAGAAGATCAAAGAGGAGCCTGAGAAAGAGGGAGAGGATTCCGTTAGACGATTTTCGGGGAAATTGAGAGCA</genome_strand>
        <mrna_strand>GGTCGATCTGGGTCTCTCCCAACTGGATCGAATTCATTTATGGGTTTTGGGGGGTCATGGGTTGCGTCAGCTCCATTCAGGCCACGTCCCATTCCCCGCCCCACGATTCGTCGGTGAATGTTGCCGGTGTCGACAATGTCGATCCATTATTGCATATTGGATTTGCCCCTTTGGAGAAGATCAAAGAGGAGCCTGAGAAAGAGGGAGAGGATTCCGTTATACGATTTTCGGGAAAATTGATACCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E330781" ref_strand="+" ref_description="SGN-E330781 [cTOD-8-N4]">
      <seq>gtcgatctgggtctctcccaactggatcgaattcatttatgggtggtggggggtcatgggttgcgtcagctccaagcaggccacgtcccattccccgccccacgattcgtcggtgaatgttgccggtgtcgacaatgtcgatccattattgcatattggatttgcccctttggagaagatcaaagaggagcctgagaaagagggagaggattccgttagacgattttcggggaaattgagagcatccaagaagggaaattctgataagaaggcggctagttttagcatcaaatttggaaggttaactgaaggtgaacatttggccgccggatggcctgtttggctgactgccgttgccggtgaagctattgatggatggatgcctctgaaatcaaacatgttccagaaattagaaaagattggacaaggtacatatagcagtgtttaccgagcacgtgatattggaaatggtaaaatggtcgccctgaagaaggtgcgatttgacaatttccaaccagatagtgtcagatttatggcacgagaaattgcaattctccgcaaacttgaccatccaaacattatgaagctggaagggataatcacttctcggttatcatgtagcatttaccttgttttcgagtatatggaacatgacctatctggattgttatcatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="69329" stop="72987"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69629" g_stop="70046" g_length="418"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="418" r_length="418" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="70047" i_stop="72429" i_length="2383">
            <donor d_prob="0.965" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72430" g_stop="72687" g_length="258"/>
          <reference_exon_boundary r_type="cDNA" r_start="419" r_stop="676" r_length="258" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E330781" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>676</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E330781" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69629" e_stop="70046"/>
          <exon e_start="72430" e_stop="72687"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCGATCTGGGTCTCTCCCAACTGGATCGAATTCATTTATGGGTTTTGGGGGGTCATGGGTTGCGTCAGCTCCAAGCAGGCCACGTCCCATTCCCCGCCCCACGATTCGTCGGTGAATGTTGCCGGTGTCGACAATGTCGATCCATTATTGCATATTGGATTTGCCCCTTTGGAGAAGATCAAAGAGGAGCCTGAGAAAGAGGGAGAGGATTCCGTTAGACGATTTTCGGGGAAATTGAGAGCATCCAAGAAGGGAAATTCTGATAAGAAGGCGGCTAGTTTTAGCATCAAATTTGGAAGGTTAACTGAAGGTGAACATTTGGCCGCCGGATGGCCTGTTTGGCTGACTGCCGTTGCCGGTGAAGCTATTGATGGATGGATGCCTCTGAAATCAAACATGTTCCAGAAATTAGAAAAGGTAACCAATGTTTCCCTAAAAAAGATATGATTCCTCGTATTATCTGGACAGATTCTTGATTTTACAAATTTGTATTCATGTGTGTATGCAACATAAAAAGGTTATCCTTTCAATAGCAGTTCCATTACTTTTCTCCCATTCCGTTGCAGAAGGAAAAGACACCATTGCAAACATTTACCCCAAAAAGATGAATATTGTGGTGCTTCATGCCATCATTAACTCCTGCATTCGCCATTTATAGATTAGGTATTACTTCAAGTCATGGTCTCCATTTTACTGTAATCAATCATGTAAGGAAAGCTTACTGACAGAATCTAAGGGAATCTAGTTAAATCATTAAAATCTCGGCTTTAATCATAGTTTGACAATTTTTACACTGGCATCAACCTTCCATTACCTTCCTCTTTAGGATTTGTCTATGTCTTGAAACACATGTAGGCGAGGTTATCCAATATTGGTTGATGCATTTAATACGGAGCAGCTAGATACAGAAGATTTTTATGGTTGATGCAAAACTAATTTGGGAATGACGCATAGTTTATAAATTGAAAATCTTCAGCTTTTCTATCAAGGTTATTTTTGATGAATAAGTGTCTGAGAGAAATCTGCACCACATCATGCTTTCTCATCAGTTCCTACTCAATCATCAGCCTTTCAATTTGAGTAATTGGCTAAAAATTCTGTGCATGTTTTAGCAAGTTTTGTTAGCTGAGACTATAAATTACCATTTCTTTAACCCCTCTCATGGTACCATTTTAATGAACTTGATACTCCCCAAAGGAGGAAACCTTTATTTTTTCTGCTTTTACTTGCCATCCTTATCTTTCAATCTGAACTTGCATGTGATCCACTTGCTACTTCCAATTATGAGGAACTACAAGGTCTATAATAAACTGAAAATACCTTTTAATTTTTCTTTACTTGTATCTTTGTTCCCTTATGTTACCTCTGGAGAAAGAGAAGCTTATAGTCGAGAGTTATTAATCTGAAGAAAAACGTAGAGATATTATAAGTGCGAGATAGATTCGAATCTGAGCTGGGATATAGGTGATATGGTTTATAACTTAATATTGAGGAATTTAGCAACATATCTAGACTTTGGCTGCTTAGTGTTGGGTTTTATTTGCCCTAAATTTCTTACCATAAATAGGTTTTCCTTGTAGGAAAAGGTTTTGGATTGACTAATCTTTTTCTTGTAGGAAAAGGTTTAGGACTCTATAAATAGAGGCATGTTCCTTCTAACTTAATCAGCATTCACAATGTAGTCTTAAGAGCTTTAAGAGTTTTGGTTAGGGGGAGAATTTGTGGGTCACAAGCTTGATATGTTATCACTTGTGTGAACCTCCCATGTATTCCGAGTGAATTGGTTGAGGTTGTTTCTCTCTATATTTTGTACTCTCATATTTATAGTGGATTGCTCATCTCCTTTGTGGACGTAGGTCGATTGACCGAACCACGTTAAATCTCTGTGTCTTTTGGTATATTTCTCGTTGTCTTCTTACTCGTGGTCTTTCGAGGTTTGCTTCGCTAGCTTCCGCATTTACACCTGCTTATTTCCGGTCCTAACAAGTGGTATCAGAGCCAAATTCAATAACGAAGTCAGGTTCAGTGGTTCGATAATCGATGATTAAACCAGGTTAGAAAGATGTGTTCATCTAGGCGGTGTAGTTCTAGCAGTAACCTTTTTGACAGTAATGAAGATTTTGTTGGAGAAATTGTTTCAGAGAGATTCTTTATGTTGAGACATAAATTTTGCAAAGGAGATTATGGAGAGGAGAAGCAAGTTGTTGAAGATTAAGTCAAGAAGGTGGACAAATTTATTTTGTCAGAAATTCAGGCCAAGGGGGAGATTTGTTGGGTTTTATTTGCCTTAAATTTCCTACCATAAATAGGTTTTCCTTGTAGGAAAAGGATTTGGGTACTCTATAAATAGAGGCATGTTCCTTCTAACTTAATCAGCATTCACAATGTAGTCTTAAGAGCTTTGAGAGTTTTGGTTAGGGGAAGAATTTGTGGGTCACAAGCTTGATATGTTATCACTTGTGTGAACCTCCCATGTATTCCGAGTGAATTGGTTGAGGTCGTTTCCCTCTGTATTTATACTCTCATATTTATAGTGGATTGTTCATCTCCTTTCTGGACGTAGGTCGATTGACCAAACCACGTTAAATCTCTGTGTCTTTTGGTATATTTATAGTTGTTTTCTTACTCGTGGTCTTTCGAGGTTTGCTTTGCTAGCTTCCGCATTTAAACCTGCTTATTTCCGGTCCTAACACTTAGTTCAATACTTAGCTTTGTCTGGTAATTTTAGTGGTACATTATCTCCCTACTGATGTAAATTATTTTCTTCTTACGAAGATTCTTTCTTTTTCAACATCTGTAGATTGGACAAGGTACATATAGCAGTGTTTACCGAGCACGTGATATTGGAAATGGTAAAATGGTCGCCCTGAAGAAGGTGCGATTTGACAATTTCCAACCAGATAGTGTCAGATTTATGGCACGAGAAATTGCAATTCTCCGCAAACTTGACCATCCAAACATTATGAAGCTGGAAGGGATAATCACTTCTCGGTTATCATGTAGCATTTACCTTGTTTTCGAGTATATGGAACATGACCTATCTGGATTGTTATCATGT</genome_strand>
        <mrna_strand>GTCGATCTGGGTCTCTCCCAACTGGATCGAATTCATTTATGGGTGGTGGGGGGTCATGGGTTGCGTCAGCTCCAAGCAGGCCACGTCCCATTCCCCGCCCCACGATTCGTCGGTGAATGTTGCCGGTGTCGACAATGTCGATCCATTATTGCATATTGGATTTGCCCCTTTGGAGAAGATCAAAGAGGAGCCTGAGAAAGAGGGAGAGGATTCCGTTAGACGATTTTCGGGGAAATTGAGAGCATCCAAGAAGGGAAATTCTGATAAGAAGGCGGCTAGTTTTAGCATCAAATTTGGAAGGTTAACTGAAGGTGAACATTTGGCCGCCGGATGGCCTGTTTGGCTGACTGCCGTTGCCGGTGAAGCTATTGATGGATGGATGCCTCTGAAATCAAACATGTTCCAGAAATTAGAAAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGACAAGGTACATATAGCAGTGTTTACCGAGCACGTGATATTGGAAATGGTAAAATGGTCGCCCTGAAGAAGGTGCGATTTGACAATTTCCAACCAGATAGTGTCAGATTTATGGCACGAGAAATTGCAATTCTCCGCAAACTTGACCATCCAAACATTATGAAGCTGGAAGGGATAATCACTTCTCGGTTATCATGTAGCATTTACCTTGTTTTCGAGTATATGGAACATGACCTATCTGGATTGTTATCATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E331314" ref_strand="+" ref_description="SGN-E331314 [cTOD-6-L24]">
      <seq>tgtttggctgactgccgttgccggtgaagctattgatggatggatgcctctgaaatcaaacatgttccagaaattagaaaagattggacaaggtacatatagcagtgtttaccgagcacgtgatattggaaatggtaaaatggtcgccctgaagaaggtgcgatttgacaatttgcaaccagatagtgtcagatttatggcacgagaaattgcaattctccgcaaacttgaccatccaaacattatgaagctggaagggataatcacttctcggttatcatgtagcatttaccttgttttcgagtatatggaacatgacctatctggattgttatcatgtcctgacatcaaatttagtgattcgcagatcaaatgctacatgcagcagcttctgagcggactagagcactgccattcacgagggataatgcatcgggata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="69665" stop="73224"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69965" g_stop="70046" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="82" r_length="82" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="70047" i_stop="72429" i_length="2383">
            <donor d_prob="0.965" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72430" g_stop="72714" g_length="285"/>
          <reference_exon_boundary r_type="cDNA" r_start="83" r_stop="367" r_length="285" r_score="0.996"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="72715" i_stop="72851" i_length="137">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.864" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="72852" g_stop="72924" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="368" r_stop="440" r_length="73" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E331314" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>440</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E331314" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69965" e_stop="70046"/>
          <exon e_start="72430" e_stop="72714"/>
          <exon e_start="72852" e_stop="72924"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTTTGGCTGACTGCCGTTGCCGGTGAAGCTATTGATGGATGGATGCCTCTGAAATCAAACATGTTCCAGAAATTAGAAAAGGTAACCAATGTTTCCCTAAAAAAGATATGATTCCTCGTATTATCTGGACAGATTCTTGATTTTACAAATTTGTATTCATGTGTGTATGCAACATAAAAAGGTTATCCTTTCAATAGCAGTTCCATTACTTTTCTCCCATTCCGTTGCAGAAGGAAAAGACACCATTGCAAACATTTACCCCAAAAAGATGAATATTGTGGTGCTTCATGCCATCATTAACTCCTGCATTCGCCATTTATAGATTAGGTATTACTTCAAGTCATGGTCTCCATTTTACTGTAATCAATCATGTAAGGAAAGCTTACTGACAGAATCTAAGGGAATCTAGTTAAATCATTAAAATCTCGGCTTTAATCATAGTTTGACAATTTTTACACTGGCATCAACCTTCCATTACCTTCCTCTTTAGGATTTGTCTATGTCTTGAAACACATGTAGGCGAGGTTATCCAATATTGGTTGATGCATTTAATACGGAGCAGCTAGATACAGAAGATTTTTATGGTTGATGCAAAACTAATTTGGGAATGACGCATAGTTTATAAATTGAAAATCTTCAGCTTTTCTATCAAGGTTATTTTTGATGAATAAGTGTCTGAGAGAAATCTGCACCACATCATGCTTTCTCATCAGTTCCTACTCAATCATCAGCCTTTCAATTTGAGTAATTGGCTAAAAATTCTGTGCATGTTTTAGCAAGTTTTGTTAGCTGAGACTATAAATTACCATTTCTTTAACCCCTCTCATGGTACCATTTTAATGAACTTGATACTCCCCAAAGGAGGAAACCTTTATTTTTTCTGCTTTTACTTGCCATCCTTATCTTTCAATCTGAACTTGCATGTGATCCACTTGCTACTTCCAATTATGAGGAACTACAAGGTCTATAATAAACTGAAAATACCTTTTAATTTTTCTTTACTTGTATCTTTGTTCCCTTATGTTACCTCTGGAGAAAGAGAAGCTTATAGTCGAGAGTTATTAATCTGAAGAAAAACGTAGAGATATTATAAGTGCGAGATAGATTCGAATCTGAGCTGGGATATAGGTGATATGGTTTATAACTTAATATTGAGGAATTTAGCAACATATCTAGACTTTGGCTGCTTAGTGTTGGGTTTTATTTGCCCTAAATTTCTTACCATAAATAGGTTTTCCTTGTAGGAAAAGGTTTTGGATTGACTAATCTTTTTCTTGTAGGAAAAGGTTTAGGACTCTATAAATAGAGGCATGTTCCTTCTAACTTAATCAGCATTCACAATGTAGTCTTAAGAGCTTTAAGAGTTTTGGTTAGGGGGAGAATTTGTGGGTCACAAGCTTGATATGTTATCACTTGTGTGAACCTCCCATGTATTCCGAGTGAATTGGTTGAGGTTGTTTCTCTCTATATTTTGTACTCTCATATTTATAGTGGATTGCTCATCTCCTTTGTGGACGTAGGTCGATTGACCGAACCACGTTAAATCTCTGTGTCTTTTGGTATATTTCTCGTTGTCTTCTTACTCGTGGTCTTTCGAGGTTTGCTTCGCTAGCTTCCGCATTTACACCTGCTTATTTCCGGTCCTAACAAGTGGTATCAGAGCCAAATTCAATAACGAAGTCAGGTTCAGTGGTTCGATAATCGATGATTAAACCAGGTTAGAAAGATGTGTTCATCTAGGCGGTGTAGTTCTAGCAGTAACCTTTTTGACAGTAATGAAGATTTTGTTGGAGAAATTGTTTCAGAGAGATTCTTTATGTTGAGACATAAATTTTGCAAAGGAGATTATGGAGAGGAGAAGCAAGTTGTTGAAGATTAAGTCAAGAAGGTGGACAAATTTATTTTGTCAGAAATTCAGGCCAAGGGGGAGATTTGTTGGGTTTTATTTGCCTTAAATTTCCTACCATAAATAGGTTTTCCTTGTAGGAAAAGGATTTGGGTACTCTATAAATAGAGGCATGTTCCTTCTAACTTAATCAGCATTCACAATGTAGTCTTAAGAGCTTTGAGAGTTTTGGTTAGGGGAAGAATTTGTGGGTCACAAGCTTGATATGTTATCACTTGTGTGAACCTCCCATGTATTCCGAGTGAATTGGTTGAGGTCGTTTCCCTCTGTATTTATACTCTCATATTTATAGTGGATTGTTCATCTCCTTTCTGGACGTAGGTCGATTGACCAAACCACGTTAAATCTCTGTGTCTTTTGGTATATTTATAGTTGTTTTCTTACTCGTGGTCTTTCGAGGTTTGCTTTGCTAGCTTCCGCATTTAAACCTGCTTATTTCCGGTCCTAACACTTAGTTCAATACTTAGCTTTGTCTGGTAATTTTAGTGGTACATTATCTCCCTACTGATGTAAATTATTTTCTTCTTACGAAGATTCTTTCTTTTTCAACATCTGTAGATTGGACAAGGTACATATAGCAGTGTTTACCGAGCACGTGATATTGGAAATGGTAAAATGGTCGCCCTGAAGAAGGTGCGATTTGACAATTTCCAACCAGATAGTGTCAGATTTATGGCACGAGAAATTGCAATTCTCCGCAAACTTGACCATCCAAACATTATGAAGCTGGAAGGGATAATCACTTCTCGGTTATCATGTAGCATTTACCTTGTTTTCGAGTATATGGAACATGACCTATCTGGATTGTTATCATGTCCTGACATCAAATTTAGTGATTCGCAGGTTGGTTCATCTTTGACAATGTCTTTCTTTCATTGAATTTGGTATTAAGATCACTATTTGAATCTATCTTGTCTTGCAAAATGTAAATGGAAGAAGATTCTCTTTGTTTATTGAATTTTCTTTTTGCGTGGAAGTAGATCAAATGCTACATGCAGCAGCTTCTGAGCGGACTAGAGCACTGCCATTCACGAGGGATAATGCATCGGGATA</genome_strand>
        <mrna_strand>TGTTTGGCTGACTGCCGTTGCCGGTGAAGCTATTGATGGATGGATGCCTCTGAAATCAAACATGTTCCAGAAATTAGAAAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGACAAGGTACATATAGCAGTGTTTACCGAGCACGTGATATTGGAAATGGTAAAATGGTCGCCCTGAAGAAGGTGCGATTTGACAATTTGCAACCAGATAGTGTCAGATTTATGGCACGAGAAATTGCAATTCTCCGCAAACTTGACCATCCAAACATTATGAAGCTGGAAGGGATAATCACTTCTCGGTTATCATGTAGCATTTACCTTGTTTTCGAGTATATGGAACATGACCTATCTGGATTGTTATCATGTCCTGACATCAAATTTAGTGATTCGCAG.........................................................................................................................................ATCAAATGCTACATGCAGCAGCTTCTGAGCGGACTAGAGCACTGCCATTCACGAGGGATAATGCATCGGGATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E314347" ref_strand="+" ref_description="SGN-E314347 [cTOA-21-F16]">
      <seq>aaccactgaccagtcgtgtggttacattatggtatcgacctcctgaactactattgggatcaacaagttatggagtcactgtggatttgtggagtgttggttgcgtttttgctgaactctttttcggaaggccactcctgaaagggaggactgaggttgaacaactgcacaaaattttcaaactctgtggttccccacccgaagattactggaaaaggtctaaacttccacttgcaaccatgttcaaaccaaagcaaccatatgacagtacacttcgagatagatgtaaagaattaccaaaaagtgctgtaaaccttattgaaacacttatttcaatagatcctcataaacgtggaactgcttcatctgctctcaattctgagtatttcaataccaagccttatgcttgtgactcgtcaagcctgccaaagtacccaccgaacaaggaaattgatgcaaagttcagggaagaagcgagaagaaagagagccagttccacagtgcaaacatcggaaacttctaaaaattcaagaaaatccaggaaaggtcttcaagaaccaaacaatttctgcaaagttgttccaacagaggaagttgaggcaaatgttcatggttctcatagaaattacggtagtaatgcacagatatctaaaggaagacgagctactgtctcacggatatncatgaagccattgtatgacacagtatcagacgctgcttctcagatgactgatgagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="72715" stop="74896"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73015" g_stop="73169" g_length="155"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="155" r_length="155" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="73170" i_stop="73393" i_length="224">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="73394" g_stop="73621" g_length="228"/>
          <reference_exon_boundary r_type="cDNA" r_start="156" r_stop="383" r_length="228" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="73622" i_stop="73842" i_length="221">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.100" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="73843" g_stop="73940" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="384" r_stop="481" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="73941" i_stop="74253" i_length="313">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.727" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="74254" g_stop="74362" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="482" r_stop="590" r_length="109" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="74363" i_stop="74448" i_length="86">
            <donor d_prob="0.879" d_score="1.00"/>
            <acceptor a_prob="0.923" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="74449" g_stop="74596" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="591" r_stop="738" r_length="148" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E314347" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>738</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E314347" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73015" e_stop="73169"/>
          <exon e_start="73394" e_stop="73621"/>
          <exon e_start="73843" e_stop="73940"/>
          <exon e_start="74254" e_stop="74362"/>
          <exon e_start="74449" e_stop="74596"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACCACTGACCAGTCGTGTGGTTACATTATGGTATCGACCTCCTGAACTACTATTGGGATCAACAAGTTATGGAGTCACTGTGGATTTGTGGAGTGTTGGTTGCGTTTTTGCTGAACTCTTTTTCGGAAGGCCACTCCTGAAAGGGAGGACTGAGGTCAGTATTTCCCAGATAACTTCTGTTGAATTTGATAAAATTTATCAAACATCTCTGAGAGCATGTTGCAAAAAGGGACATGATTGCTAAATAGTGCTAAATTAACACGACTGAAGCCTCCCCAAATAATATGAAGTGGTTAAATCATTCTCCTATATCGAATACGCAATAATATCACTGTTCCTTGTCAATTGTGAAAAGATCCTGGTTGTCTATTTCTGCAGGTTGAACAACTGCACAAAATTTTCAAACTCTGTGGTTCCCCACCCGAAGATTACTGGAAAAGGTCTAAACTTCCACTTGCAACCATGTTCAAACCAAAGCAACCATATGACAGTACACTTCGAGATAGATGTAAAGAATTACCAAAAAGTGCTGTAAACCTTATTGAAACACTTATTTCAATAGATCCTCATAAACGTGGAACTGCTTCATCTGCTCTCAATTCTGAGGTAAGCTTAACAAAGACACAGAGTGCATGAGTTTTTATCTCACCGGAAAATTCCGTTTTGACAGAGTCACCTCATTCTTTTTATTTTGCTTTTAGTTTTTTGTTCCTCATTGGTATTGATGATGTTTATGTTTTTTTCATTTGTTCTTAAGCATTATTGTTCTTTAACCTGGTTTTTATAGCTAACTTTTTGGTTCAAATTTATGTTGTACCTTTCTTTAGTATTTCAATACCAAGCCTTATGCTTGTGACTCGTCAAGCCTGCCAAAGTACCCACCGAACAAGGAAATTGATGCAAAGTTCAGGGAAGAAGCGAGAAGGTGAATTCCCTTCTTCTTCTTTTTTCTTCATGAAAGGATTTTACTGCACATGGTTCTATTAAATCATTGCCTAGCCCCCATATATGGGCCAGTAAAACAATAAAGCCCAAAGAACAATATATGCATTTCACTGTCAATGCTGCACCTCATAGTTATCTAGTTAACTTACCCAAACACATCACTATCGGGCTTCAAGTGATTTGGCTCCAACAAATTAAATTTATACATCTCTGTTTCTGATAATCGCGCACCTTTCTTGACTTTGCATCCCTCTTATTCCTCTTTAAGCTTAATTTGAGCCTTGCTTTTTCAGAAAGAGAGCCAGTTCCACAGTGCAAACATCGGAAACTTCTAAAAATTCAAGAAAATCCAGGAAAGGTCTTCAAGAACCAAACAATTTCTGCAAAGTTGTTCCAACAGAGGTTTCTGTCTTTTCTCACAGAAACATACATTCATTCACATTTCCTCTTGATAGTATATTGAGAAGGCTTGTCTTGTATTTTTGAAGGAAGTTGAGGCAAATGTTCATGGTTCTCATAGAAATTACGGTAGTAATGCACAGATATCTAAAGGAAGACGAGCTACTGTCTCACGGATATCAATGAAGCCATTGTATGACACAGTATCAGACGCTGCTTCTCAGATGACTGATGAGT</genome_strand>
        <mrna_strand>AACCACTGACCAGTCGTGTGGTTACATTATGGTATCGACCTCCTGAACTACTATTGGGATCAACAAGTTATGGAGTCACTGTGGATTTGTGGAGTGTTGGTTGCGTTTTTGCTGAACTCTTTTTCGGAAGGCCACTCCTGAAAGGGAGGACTGAG................................................................................................................................................................................................................................GTTGAACAACTGCACAAAATTTTCAAACTCTGTGGTTCCCCACCCGAAGATTACTGGAAAAGGTCTAAACTTCCACTTGCAACCATGTTCAAACCAAAGCAACCATATGACAGTACACTTCGAGATAGATGTAAAGAATTACCAAAAAGTGCTGTAAACCTTATTGAAACACTTATTTCAATAGATCCTCATAAACGTGGAACTGCTTCATCTGCTCTCAATTCTGAG.............................................................................................................................................................................................................................TATTTCAATACCAAGCCTTATGCTTGTGACTCGTCAAGCCTGCCAAAGTACCCACCGAACAAGGAAATTGATGCAAAGTTCAGGGAAGAAGCGAGAAG.........................................................................................................................................................................................................................................................................................................................AAAGAGAGCCAGTTCCACAGTGCAAACATCGGAAACTTCTAAAAATTCAAGAAAATCCAGGAAAGGTCTTCAAGAACCAAACAATTTCTGCAAAGTTGTTCCAACAGAG......................................................................................GAAGTTGAGGCAAATGTTCATGGTTCTCATAGAAATTACGGTAGTAATGCACAGATATCTAAAGGAAGACGAGCTACTGTCTCACGGATATNCATGAAGCCATTGTATGACACAGTATCAGACGCTGCTTCTCAGATGACTGATGAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E395023" ref_strand="+" ref_description="SGN-E395023 [TUS-40-H4](-)">
      <seq>gaagggttgggttttccgggcccttgttatttcagtcccagacgttcgactagaagaaggatagtcaaactcgaaaagctggtcgtaggtcccgattctatggagatatataattggaatggctaagaggactctgtgtctctcttgttggtacctcaaagttcataaaaggttttggtatcgatccttgcagtgaatgttcttacatatcttcaggaagctggtgaagaaatcatgcataagatgcaagttcacatcatagaaatcaaaagggataagccagaatattgatgctcaaagtggtttgcaaatttcattaacagattggagaacattgaaatgctcaccttttgctatccaaacttgattttacaatctcttttttctttttagttgcttttcatagtttgtattttacatgtttagctcatttcttatacagctttcacattatttttgtatataaaggtcatgggcaaagagggtatgatttattacagagttttatgtactaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="75379" stop="76614"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75679" g_stop="75783" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="105" r_length="105" r_score="0.962"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="75784" i_stop="75905" i_length="122">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="75906" g_stop="76313" g_length="408"/>
          <reference_exon_boundary r_type="cDNA" r_start="106" r_stop="513" r_length="408" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="514" polyA_stop="527"/>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E395023" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>513</cumulative_length_of_scored_exons>
        <coverage percentage="0.973" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E395023" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75679" e_stop="75783"/>
          <exon e_start="75906" e_stop="76313"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGGGTTGGGTTCTCCGGGCCCTTGTTATCTCAGTCCCAGACGTTTGACTCGAAGAAGGATAGTCAAACTCGAAAAGCTGGTCGTAGGTCCCGATTCTATGGAGGTGAAATAAATCTTGTCATATTTTCCTTTACATCAACTAGACATATTTGAGTCACCTACTTCAGCCAAATATTGCTATTTTACAAACTTTTACCAAGTTTTTCTTTTTCTTTTGCCATGCAGATATATAATTGGAATGGCTAAGAGGACTTTGTGTCTCTCTTGTTGGTACCTCAAAGTTCATCGAAGGTTTTGGTATCGATCCTTGCAGTGAATGTTCTTACATATCTTCAGGAAGCTGGTGAAGAAATCATGCATAAGATGCAAGTTCACATCATAGAAATCAAAAGGGATAAGCCAGAATATTGATGCTCAAAGTGGTTTGCAAATTTCATTAACAGATTGGAGAACATTGAAATGCTCACCTTTTGCTATCCAAACTTGATTTTACAATCTCTTTTTTCTTTTTATTTGCTTTTCATAGTTTGTATTTTACATGTTTAGCTCATTTCTTATACAGCTTTCACATTATTTTTGTATATATATATCATGGGCAAAGAGGGTATGATTTATTACAGAGTTTTCTTTACT</genome_strand>
        <mrna_strand>GAAGGGTTGGGTTTTCCGGGCCCTTGTTATTTCAGTCCCAGACGTTCGACTAGAAGAAGGATAGTCAAACTCGAAAAGCTGGTCGTAGGTCCCGATTCTATGGAG..........................................................................................................................ATATATAATTGGAATGGCTAAGAGGACTCTGTGTCTCTCTTGTTGGTACCTCAAAGTTCATAAAAGGTTTTGGTATCGATCCTTGCAGTGAATGTTCTTACATATCTTCAGGAAGCTGGTGAAGAAATCATGCATAAGATGCAAGTTCACATCATAGAAATCAAAAGGGATAAGCCAGAATATTGATGCTCAAAGTGGTTTGCAAATTTCATTAACAGATTGGAGAACATTGAAATGCTCACCTTTTGCTATCCAAACTTGATTTTACAATCTCTTTTTTCTTTTTAGTTGCTTTTCATAGTTTGTATTTTACATGTTTAGCTCATTTCTTATACAGCTTTCACATTATTTTTGTATATAAAGGTCATGGGCAAAGAGGGTATGATTTATTACAGAGTTTTATGTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E547817" ref_strand="+" ref_description="SGN-E547817 [TUS-71-O8](-)">
      <seq>gacgtctctcctcagttcctggaaagcatcaagaaacttctcgatgatgatatggagaaggttaaaggatttgcaaaagattcaatagttcctttcagagagaggttgaaaataatggttggggcggttaatccagaagatcttgtttccagttcaactgaaaggaagcttttgaatagttacaacgagaaacctgtgctttcccgtcctcaacacagcttttatgagggctcaaattactttgagattgatcttgacattcatcgcttcagctacatagcaagaaggggacttgatgcattcagagatcgtttacaacatggcatattggatcttggtctaacaattcaggcacaaaagccggaggagctgcccgagcaagtgcttgcttgtgtgagattgaacaagattgattttgttgacaatggacaaattccaactcttctgagcattgaggaagataattgttcatactaatttatacaaaatcagtgatacatttgcatattgcatgggggagttttcaaatggtcccttgatgatcaagcaattccaactttctatacaagcaaattaaaaaaaaaacattgtatgataagaaattgtattctgaaagatgaaatttttttaaaaaggtgatcatgttgatactaaggtccaccatttttcaactgatcacacccttaacataatttagtactaataagaaaaaaccactatcacttagcatttactttatttaagatattgtatatatttgagaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="-" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="79587" stop="77402"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79287" g_stop="79255" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="33" r_length="33" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79254" i_stop="78671" i_length="584">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.982" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="78670" g_stop="78476" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="34" r_stop="228" r_length="195" r_score="0.995"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="78475" i_stop="78367" i_length="109">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78366" g_stop="78244" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="229" r_stop="351" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="78243" i_stop="78115" i_length="129">
            <donor d_prob="0.918" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="78114" g_stop="77694" g_length="421"/>
          <reference_exon_boundary r_type="cDNA" r_start="352" r_stop="772" r_length="421" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="-" ref_id="SGN-E547817" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>772</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E547817" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79287" e_stop="79255"/>
          <exon e_start="78670" e_stop="78476"/>
          <exon e_start="78366" e_stop="78244"/>
          <exon e_start="78114" e_stop="77694"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACGTCTCTCCTCAGTTCCTGGAAAGCATCAAGGTAGGTTATGTCTGATTTGTTCAAAAATAGTTTATCTATGTCAAACTTAATTATAACTGACATCGATATTCTCATTTATAATATATCTTTATCAAACTTGATTATAAGAACTTATACATATTCTCTTATTCACCTTATCCCTGAAAGTCAACTAAGTTTTTCTATTTGGGGTGTTCTTTATCTGGCATTTGATTTGTTAGACAAGAGAGCTAAACGTATTTTCACAATGTAAGTGTTTCCATCTAATCTGGCATTGATAGGATAAGCGCCTCATAATGTGTTTTCCCCTTTCTCGGCATAGCTGGAAATCTAAGTCTAGTTGATCGAGATGACAACACTTAACGTTGGGATGATTTTTCAGTTCACGTCCATGTGTCCGTAATTTTTCCCCTGCTCCTGGGGCAGGGGTTACTTCCACATGCAAAACATTAATCTTGGGATTTCCTTGTATCAAACTTTTGCTGACATGTTCTTTTTTTCCTTGTGAAAATGTGGTGATCCTCTAAGACGTTTACTTCATAGTAGAAATGGCGGATAGGGAGAAATTACTGGACTGATTTTCTTTCTATTGGCTTATGTGACAGAAACTTATCGATGATGATATGGAGAAGGTTAAAGGATTTGCAAAAGATTCAATAGTTCCTTTCAGAGAGAGGTTGAAAATAATGGTTGGGGCGGTTAATCCAGAAGATCTTGTTTCCAGTTCAACTGAAAGGAAGCTTTTGAATAGTTACAACGAGAAACCTGTGCTTTCCCGTCCTCAACACAGCTTTTATGAGGTGGATATATATATATATATATCTTTTCAATGATGATCTTTTACTTACTTCTCTATGTCAGTTAGCCATGTCTTGGCTGTTCTTGACATCAAAACGAATTCTGTTGCAGGGCTCAAATTACTTTGAGATTGATCTTGACATTCATCGCTTCAGCTACATAGCAAGAAGGGGACTTGATGCATTCAGAGATCGTTTACAACATGGCATATTGGATCTTGGTCTAACAATTCAGGTTTCTTGTTATTATACTTTTCCCTTCTTGAGAATTAGAAAATGAGCTCATGCTTTGGCTTTTTTAAATGATGTGCACAGATTTAACTTATATATACTGATAACGTAAAAATAACTCTAAATCCTGTAGGCACAAAAGCCGGAGGAGCTGCCCGAGCAAGTTCTTGCTTGTGTGAGATTGAACAAGATTGATTTTGTTGACAATGGACAAATTCCAACTCTTCTGAGCATTGAGGAAGATAATTGTTCATACTAATTTATACAAAATCAGTGATACATTTGCATATTGCATGGGGGAGTTTTCAAATGGTCCCTTGATGATCAAGCAATTCCAACTTTCTATACAAGCAAA-AAAAAAAAAAACATTGTATAATAAGAAATTGTATTCTGAAAGATGAAATTTTTAAAAAAAGGTGATCATGTTGATACTAAGGTCCACCATTTTTCAACTGATCACACCCCTAACATAATTTAGTACTAATAAGAAAAAACCAATATCACTTAGCATTTACTTTATTTAAGATATTGTATATATTTTGAGAAGGCAATTG</genome_strand>
        <mrna_strand>GACGTCTCTCCTCAGTTCCTGGAAAGCATCAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACTTCTCGATGATGATATGGAGAAGGTTAAAGGATTTGCAAAAGATTCAATAGTTCCTTTCAGAGAGAGGTTGAAAATAATGGTTGGGGCGGTTAATCCAGAAGATCTTGTTTCCAGTTCAACTGAAAGGAAGCTTTTGAATAGTTACAACGAGAAACCTGTGCTTTCCCGTCCTCAACACAGCTTTTATGAG.............................................................................................................GGCTCAAATTACTTTGAGATTGATCTTGACATTCATCGCTTCAGCTACATAGCAAGAAGGGGACTTGATGCATTCAGAGATCGTTTACAACATGGCATATTGGATCTTGGTCTAACAATTCAG.................................................................................................................................GCACAAAAGCCGGAGGAGCTGCCCGAGCAAGTGCTTGCTTGTGTGAGATTGAACAAGATTGATTTTGTTGACAATGGACAAATTCCAACTCTTCTGAGCATTGAGGAAGATAATTGTTCATACTAATTTATACAAAATCAGTGATACATTTGCATATTGCATGGGGGAGTTTTCAAATGGTCCCTTGATGATCAAGCAATTCCAACTTTCTATACAAGCAAATTAAAAAAAAAACATTGTATGATAAGAAATTGTATTCTGAAAGATGAAATTTTTTTAAAAAGGTGATCATGTTGATACTAAGGTCCACCATTTTTCAACTGATCACACCCTTAACATAATTTAGTACTAATAAGAAAAAACCACTATCACTTAGCATTTACTTTATTTAAGATATTGTATATA-TTTGAGAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E547785" ref_strand="+" ref_description="SGN-E547785 [TUS-71-N13]">
      <seq>atatatatataaatataaatataaataataagatcagttggtaaacagagcaggtgcggaagtgtgtttggatccgacgtcggagtccacacttcctcttcctattctctgtattcctccatttttgttctttttttcttttattttcaacagaaagagcagaagacgctggcttcgttcttccttcactatcaagacaggtgatgcttaattttggaacttttactgaattttgagagtatccgtatttcttgtgttccacctggaagtggtgtctcgtatgggatagtatcgattggcagaaaaatttgtcacctgagtcagaggaatgggtgcttgtgtatcaactccagcaattccaatcaaaatgaggaggaaatttcctggtcgccctagaaagtaccatggaaagaactcaaaatctgcttcgaaaataaatggcgatgcaggatcaatggttacagatattgctgttagtgagtttgttcacaaaactacgacctgcagaagatctgagtgctccaattctaaagttcatgttactcagatgcagtggcaccatagtcaaatagatgcaaatgttctttgccaggaggatgcatggtttgacacagtcagcatttttgagtctgactcagatgatgaattcagtagtgttcatggaggtcgagtttctcaagtaaggaaatcacaattataaggctctctctgagacatctgttgaagaagaaaaagtggatttcgtgcaccaagaagtatcttttgcgtcccagggctgggctcgttgttcctcatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="-" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="82998" stop="79510"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82699" g_stop="82509" g_length="191"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="196" r_length="196" r_score="0.880"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82508" i_stop="81606" i_length="903">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.410" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81605" g_stop="81564" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="197" r_stop="238" r_length="42" r_score="0.881"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81563" i_stop="81325" i_length="239">
            <donor d_prob="0.866" d_score="0.88"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="81324" g_stop="80991" g_length="334"/>
          <reference_exon_boundary r_type="cDNA" r_start="239" r_stop="581" r_length="343" r_score="0.937"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="80990" i_stop="80686" i_length="305">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.954" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="80685" g_stop="80602" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="582" r_stop="665" r_length="84" r_score="0.988"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="80601" i_stop="80181" i_length="421">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.168" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="80180" g_stop="80100" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="666" r_stop="743" r_length="78" r_score="0.963"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="80099" i_stop="79864" i_length="236">
            <donor d_prob="0.977" d_score="0.96"/>
            <acceptor a_prob="0.318" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="79863" g_stop="79810" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="744" r_stop="796" r_length="53" r_score="0.963"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="-" ref_id="SGN-E547785" ref_strand="+">
        <total_alignment_score>0.933</total_alignment_score>
        <cumulative_length_of_scored_exons>786</cumulative_length_of_scored_exons>
        <coverage percentage="0.987" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E547785" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82699" e_stop="82509"/>
          <exon e_start="81605" e_stop="81564"/>
          <exon e_start="81324" e_stop="80991"/>
          <exon e_start="80685" e_stop="80602"/>
          <exon e_start="80180" e_stop="80100"/>
          <exon e_start="79863" e_stop="79810"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGTGTATATATATATATATATAAATAATAAGATCAGTTGGTAAACAGAGCAGGTGCGGAAGTGTGCTTGGATCCGGCGTCGGAGCCCACACTTCCTCTTCCTATTCTCTGTATTCCTCCATTTTT-TT-TTCTTTT-A--TACTTTCAACAGAAAGAGCCGAAGACGCTGCCTTCGTTCTTCCTTCACTATCAAGGTACGTCCCTTTTTTCTTCTGCTTATTTATTGGCACTGTTGTTGAATCGCATTTCATGGTTTCAAATGGAAGAATATTGTTTCGAATTTTTGCTTAATTATTGTTTTTAAGGATTCATAAATTGTTGTCATTATGGTTCTTCGTTTTCATATTTGGTTCTTATTTTGGGGTTTTCTGTTTTCACTTTCATTCATCTGAATTTCTACGGAAATACTTTTTTCTTTTTCTGTTGTTAAGATCATTATTGTTTTTGTTTATTTGTCTGTTGGGGTGCGTTTTATCCATTACCTTTTATGGATTTTGTCCTCTGCTTATTATGATGTGACCCATTTTGTTTTTTTTTTCAATTATAGCTGATCTGACATTTTTTAATTTGATTCAGTCTCCTAAAGTGAAAACAAACTCATCATGTTCATTCCATATCCTTTTGAAAAAGGCAAGGCAACTAATATAATTGTTTTTTCTTTAAAATAAAATAAAAAAAGTGGATGATAAACAGCTTATCTTGCCAATGGAGTATTTGGGGTTCGTTTCGTAGCTACTAAAGAGATAAATTGTTCATGTATTAGATTCTGCATAAGTTATGATGTTATATGATGTTCAATAACTAATTAGGATGTCATTAATGGAATAACTAATACATGGATTATTAATATCTGCATAATTCTAGTCAGCTGGCAAACGTCTTCACCTTTTCAGTTAATGTCTTCCTTCTCTTTTTCTTTTTCTTCTTTTCCATCTGCAAATCACATGAAACAACTGAAGTGCAGCTTGTAGAATTTATTTATTTAGATGTCTTTTGGGATTCATTGCAAGAAGTTGTCTATTTCAGGTCTTCAATAAATTTGTGAACTGCCAAATAAAGACTAATCTAATGTTGAGTAATTAAATGCTTCTTTGCAGATTGATGATGCTTAATTTTGGAACTTTTACTTAATTCTGAGAGTAAGACTTAAACTTCTTAAGCTCACTCTTCTTAAATTAGTCATTTTACATATCTTGTTGTTAGTTCATGCACATACCTATGACCGATAATTATTTTCACTTACCGAAATTTGGGGTATGAGTACTATTAGCGACATGGTCATTGAGGCTTCATATGTAACTGTCGCAAGTTGTCTGAGGTCGTTGTTGTACAGTACTATAACCAATCATTTAAAAAAATTCTCTTATTCATGTGCCAGGTATCCGTATTTCTTGTGTTCCACCTGGAAGTGGTGTCTCGTATGGGATAGTATTGATTGGCAGAAAAATTTGTCACCTGAGTCAGAGGAATGGGTGCTTGTGTATCAACTCCAGCAATTCCAATCAAAATGAGGAGGAAACTTCCTGGTCGCCCTAGAAAGTACCATGGAAAGAACTCAAAATCTGCTTCGAAAATAAATGGTGATGCAGGATCAATGGTTACAGATA-------T--TGAGTTTGTTCACAAAACTACGACCTGCAGAAGATCTGAGTGCTCCAATTCTAAAGTTCATGTTACTCAGATGCAGTGGCACCATAGTCAAATAGATGCAAATGGTATGTGATCTTTCTGTTTCTTATTTTGAACCTTATCCATTGCTTAGACTTTTGATTGATGACAAATCTATCAAATTTAACCATATTAACTGCGAATTTTATTTTGTTGATGGCCTTAAATATAGTTCATTGATCGATGGGTGTATTGTCTATATTGTGTGGTGATTTTCTGTTGCTAAGAAGGACCATGTGATTGTTCATTTTCCTTCAAAGCATTTTAAAAGGAGTTTAGTTGTTTGAGCAACTGACAAATCAGAATTATTTGACTACAACTTGCAATAATGAGCGGTTTACCTGCTTTGCAGTTCTTTGCCAGGAGGATGCATGGTTTGACACAGTCAGCATTTTTGAGTCTGACTCAGATGATGAATTCAGTAGTGTTAATGGAGGTAACTACTTTCGTATCTTCATTTTTATACTTATAGAGAATGACTTGCTCAGTGTTTGGACTAAGAACACATCTTCTTCTTTATACAGTGCTTGATTATTAATAGATAACGTGATCATTGGCTAGTTTTTATCCCTTTCATTTAGCTATTGTTATTTATGGGACGGGGTTTTTCATCTTATCTTTAGTGGAAATTTCTGAATGATTAATATTCTCGGAATACTTTTTGCTTTGTGAATCTTAGCAGTCCAAGGTTCTTATAGTCCTTCAGATCAATGTATTTAATTTAATCTATACCCCTTGCAACCTTACGTAGTTATGTACATGTGTTCACTCTCTCTATTACATATCATAGTCTTCTCTACCACAGCTAGTTACTTCCATGAGTTTCAGTGACAAGATCATTAATGCATCAAATTCAGGTCGAGTTTCTCAAGTAAGGAAATCAACAATTATAAGGCTCTCTCTGAGAACATCTGTTGAAGAAGAAAAAAGTGGATTTCGTAAGTACCTTGTGACTTTCCATTTAGTCATTACTCTTCAGTATAAATTGAGTCCCATTTGAGAGGAATTTGTGTCATAACCTCCTGGTCATTTTGTAAACTAAGAACAATATAATCTTATTGAATCATGATGTGACAGTCCTGTTTTATTTCCTTCTTCTGTAATGTAAAGAAATGTGCAAAAACTAATGCAAAGGCAGAATTGCAATACATTAACCATAATGGTACTCCTGTAGGTGCACCAAGAAAGTATCTTTTGCGTCCCAGGGCTGGGCTCATTGTTCCTCATT</genome_strand>
        <mrna_strand>ATATATATATAAATATAAATATAAATAATAAGATCAGTTGGTAAACAGAGCAGGTGCGGAAGTGTGTTTGGATCCGACGTCGGAGTCCACACTTCCTCTTCCTATTCTCTGTATTCCTCCATTTTTGTTCTTTTTTTCTTTTATTTTCAACAGAAAGAGCAGAAGACGCTGGCTTCGTTCTTCCTTCACTATCAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGGTGATGCTTAATTTTGGAACTTTTACTGAATTTTGAGA...............................................................................................................................................................................................................................................GTATCCGTATTTCTTGTGTTCCACCTGGAAGTGGTGTCTCGTATGGGATAGTATCGATTGGCAGAAAAATTTGTCACCTGAGTCAGAGGAATGGGTGCTTGTGTATCAACTCCAGCAATTCCAATCAAAATGAGGAGGAAATTTCCTGGTCGCCCTAGAAAGTACCATGGAAAGAACTCAAAATCTGCTTCGAAAATAAATGGCGATGCAGGATCAATGGTTACAGATATTGCTGTTAGTGAGTTTGTTCACAAAACTACGACCTGCAGAAGATCTGAGTGCTCCAATTCTAAAGTTCATGTTACTCAGATGCAGTGGCACCATAGTCAAATAGATGCAAATG.................................................................................................................................................................................................................................................................................................................TTCTTTGCCAGGAGGATGCATGGTTTGACACAGTCAGCATTTTTGAGTCTGACTCAGATGATGAATTCAGTAGTGTTCATGGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGAGTTTCTCAAGTAAGGAAATC-ACAATTATAAGGCTCTCTCTGAG-ACATCTGTTGAAGAAG-AAAAAGTGGATTTC............................................................................................................................................................................................................................................GTGCACCAAG-AAGTATCTTTTGCGTCCCAGGGCTGGGCTCGTTGTTCCTCATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E334289" ref_strand="+" ref_description="SGN-E334289 [cTOD-21-A20]">
      <seq>aaattagttgtgtgtatatatatatatatataaataataagatcagttggtaaacagagcaggtgcggaagtgtgcttggatccggcgtcggagcccacacttcctcttcctattctctgtattcctccatttttttttcttttatactttcaacagaaagagccgaagacgctgccttcgttcttccttcactatcaagattgatgatgcttaattttggaacttttacttaattctgagagtatccgtatttcttgtgttccacctggaagtggtgtctcgtatgggatagtattgattggcagaaaaatttgtcacctgagtcagaggaatgggtgcttgtgtatcaactccagcaattccaatcaaaatgaggaggaaacttcctggtcgccctagaaagtaccatggaaagaactcaaaatctgcttcgaaaataaatggtgatgcaggatcaatggttacagatattgagtttgttcacaaaactacgacctgcagaagatctgagtgctccaattctaaagttcatgttactcagatgcagtggcaccatagtcaaatagatgcaaatgttctttgccaggaggatgcatggtttgacacagtcagcatttttgagtctgactcagatgatgaattcagtagtgttaatgggaggtcgagtttctcaagtaaggaaatcaacaattataaggctctctctgagaacatctgttgaagaagaaaaagtggatttcgtgcaccagaaagtatcttttgcgtccagggctgggctca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="-" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="83008" stop="79522"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82708" g_stop="82509" g_length="200"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="200" r_length="200" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82508" i_stop="81606" i_length="903">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.410" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81605" g_stop="81564" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="201" r_stop="242" r_length="42" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81563" i_stop="81325" i_length="239">
            <donor d_prob="0.866" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="81324" g_stop="80991" g_length="334"/>
          <reference_exon_boundary r_type="cDNA" r_start="243" r_stop="576" r_length="334" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="80990" i_stop="80686" i_length="305">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.954" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="80685" g_stop="80602" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="577" r_stop="661" r_length="85" r_score="0.976"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="80601" i_stop="80181" i_length="421">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.168" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="80180" g_stop="80100" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="662" r_stop="741" r_length="80" r_score="0.988"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="80099" i_stop="79864" i_length="236">
            <donor d_prob="0.977" d_score="0.98"/>
            <acceptor a_prob="0.318" a_score="0.95"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="79863" g_stop="79822" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="742" r_stop="781" r_length="40" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="-" ref_id="SGN-E334289" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>783</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E334289" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82708" e_stop="82509"/>
          <exon e_start="81605" e_stop="81564"/>
          <exon e_start="81324" e_stop="80991"/>
          <exon e_start="80685" e_stop="80602"/>
          <exon e_start="80180" e_stop="80100"/>
          <exon e_start="79863" e_stop="79822"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATTAGTTGTGTGTATATATATATATATATAAATAATAAGATCAGTTGGTAAACAGAGCAGGTGCGGAAGTGTGCTTGGATCCGGCGTCGGAGCCCACACTTCCTCTTCCTATTCTCTGTATTCCTCCATTTTTTTTTCTTTTATACTTTCAACAGAAAGAGCCGAAGACGCTGCCTTCGTTCTTCCTTCACTATCAAGGTACGTCCCTTTTTTCTTCTGCTTATTTATTGGCACTGTTGTTGAATCGCATTTCATGGTTTCAAATGGAAGAATATTGTTTCGAATTTTTGCTTAATTATTGTTTTTAAGGATTCATAAATTGTTGTCATTATGGTTCTTCGTTTTCATATTTGGTTCTTATTTTGGGGTTTTCTGTTTTCACTTTCATTCATCTGAATTTCTACGGAAATACTTTTTTCTTTTTCTGTTGTTAAGATCATTATTGTTTTTGTTTATTTGTCTGTTGGGGTGCGTTTTATCCATTACCTTTTATGGATTTTGTCCTCTGCTTATTATGATGTGACCCATTTTGTTTTTTTTTTCAATTATAGCTGATCTGACATTTTTTAATTTGATTCAGTCTCCTAAAGTGAAAACAAACTCATCATGTTCATTCCATATCCTTTTGAAAAAGGCAAGGCAACTAATATAATTGTTTTTTCTTTAAAATAAAATAAAAAAAGTGGATGATAAACAGCTTATCTTGCCAATGGAGTATTTGGGGTTCGTTTCGTAGCTACTAAAGAGATAAATTGTTCATGTATTAGATTCTGCATAAGTTATGATGTTATATGATGTTCAATAACTAATTAGGATGTCATTAATGGAATAACTAATACATGGATTATTAATATCTGCATAATTCTAGTCAGCTGGCAAACGTCTTCACCTTTTCAGTTAATGTCTTCCTTCTCTTTTTCTTTTTCTTCTTTTCCATCTGCAAATCACATGAAACAACTGAAGTGCAGCTTGTAGAATTTATTTATTTAGATGTCTTTTGGGATTCATTGCAAGAAGTTGTCTATTTCAGGTCTTCAATAAATTTGTGAACTGCCAAATAAAGACTAATCTAATGTTGAGTAATTAAATGCTTCTTTGCAGATTGATGATGCTTAATTTTGGAACTTTTACTTAATTCTGAGAGTAAGACTTAAACTTCTTAAGCTCACTCTTCTTAAATTAGTCATTTTACATATCTTGTTGTTAGTTCATGCACATACCTATGACCGATAATTATTTTCACTTACCGAAATTTGGGGTATGAGTACTATTAGCGACATGGTCATTGAGGCTTCATATGTAACTGTCGCAAGTTGTCTGAGGTCGTTGTTGTACAGTACTATAACCAATCATTTAAAAAAATTCTCTTATTCATGTGCCAGGTATCCGTATTTCTTGTGTTCCACCTGGAAGTGGTGTCTCGTATGGGATAGTATTGATTGGCAGAAAAATTTGTCACCTGAGTCAGAGGAATGGGTGCTTGTGTATCAACTCCAGCAATTCCAATCAAAATGAGGAGGAAACTTCCTGGTCGCCCTAGAAAGTACCATGGAAAGAACTCAAAATCTGCTTCGAAAATAAATGGTGATGCAGGATCAATGGTTACAGATATTGAGTTTGTTCACAAAACTACGACCTGCAGAAGATCTGAGTGCTCCAATTCTAAAGTTCATGTTACTCAGATGCAGTGGCACCATAGTCAAATAGATGCAAATGGTATGTGATCTTTCTGTTTCTTATTTTGAACCTTATCCATTGCTTAGACTTTTGATTGATGACAAATCTATCAAATTTAACCATATTAACTGCGAATTTTATTTTGTTGATGGCCTTAAATATAGTTCATTGATCGATGGGTGTATTGTCTATATTGTGTGGTGATTTTCTGTTGCTAAGAAGGACCATGTGATTGTTCATTTTCCTTCAAAGCATTTTAAAAGGAGTTTAGTTGTTTGAGCAACTGACAAATCAGAATTATTTGACTACAACTTGCAATAATGAGCGGTTTACCTGCTTTGCAGTTCTTTGCCAGGAGGATGCATGGTTTGACACAGTCAGCATTTTTGAGTCTGACTCAGATGATGAATTCAGTAGTGTTAAT-GGAGGTAACTACTTTCGTATCTTCATTTTTATACTTATAGAGAATGACTTGCTCAGTGTTTGGACTAAGAACACATCTTCTTCTTTATACAGTGCTTGATTATTAATAGATAACGTGATCATTGGCTAGTTTTTATCCCTTTCATTTAGCTATTGTTATTTATGGGACGGGGTTTTTCATCTTATCTTTAGTGGAAATTTCTGAATGATTAATATTCTCGGAATACTTTTTGCTTTGTGAATCTTAGCAGTCCAAGGTTCTTATAGTCCTTCAGATCAATGTATTTAATTTAATCTATACCCCTTGCAACCTTACGTAGTTATGTACATGTGTTCACTCTCTCTATTACATATCATAGTCTTCTCTACCACAGCTAGTTACTTCCATGAGTTTCAGTGACAAGATCATTAATGCATCAAATTCAGGTCGAGTTTCTCAAGTAAGGAAATCAACAATTATAAGGCTCTCTCTGAGAACATCTGTTGAAGAAGAAAAAAGTGGATTTCGTAAGTACCTTGTGACTTTCCATTTAGTCATTACTCTTCAGTATAAATTGAGTCCCATTTGAGAGGAATTTGTGTCATAACCTCCTGGTCATTTTGTAAACTAAGAACAATATAATCTTATTGAATCATGATGTGACAGTCCTGTTTTATTTCCTTCTTCTGTAATGTAAAGAAATGTGCAAAAACTAATGCAAAGGCAGAATTGCAATACATTAACCATAATGGTACTCCTGTAGGTGCACCAAGAAAGTATCTTTTGCGTCCCAGGGCTGGGCTCA</genome_strand>
        <mrna_strand>AAATTAGTTGTGTGTATATATATATATATATAAATAATAAGATCAGTTGGTAAACAGAGCAGGTGCGGAAGTGTGCTTGGATCCGGCGTCGGAGCCCACACTTCCTCTTCCTATTCTCTGTATTCCTCCATTTTTTTTTCTTTTATACTTTCAACAGAAAGAGCCGAAGACGCTGCCTTCGTTCTTCCTTCACTATCAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATGATGCTTAATTTTGGAACTTTTACTTAATTCTGAGA...............................................................................................................................................................................................................................................GTATCCGTATTTCTTGTGTTCCACCTGGAAGTGGTGTCTCGTATGGGATAGTATTGATTGGCAGAAAAATTTGTCACCTGAGTCAGAGGAATGGGTGCTTGTGTATCAACTCCAGCAATTCCAATCAAAATGAGGAGGAAACTTCCTGGTCGCCCTAGAAAGTACCATGGAAAGAACTCAAAATCTGCTTCGAAAATAAATGGTGATGCAGGATCAATGGTTACAGATATTGAGTTTGTTCACAAAACTACGACCTGCAGAAGATCTGAGTGCTCCAATTCTAAAGTTCATGTTACTCAGATGCAGTGGCACCATAGTCAAATAGATGCAAATG.................................................................................................................................................................................................................................................................................................................TTCTTTGCCAGGAGGATGCATGGTTTGACACAGTCAGCATTTTTGAGTCTGACTCAGATGATGAATTCAGTAGTGTTAATGGGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGAGTTTCTCAAGTAAGGAAATCAACAATTATAAGGCTCTCTCTGAGAACATCTGTTGAAGAAG-AAAAAGTGGATTTC............................................................................................................................................................................................................................................GTGCACC-AGAAAGTATCTTTTGCGT-CCAGGGCTGGGCTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E547818" ref_strand="+" ref_description="SGN-E547818 [TUS-71-O8]">
      <seq>agaaaaaaaacaaaaaaaaaatagttgtgtatatatatataaatataaatataaataataagatcagttggtaaacagagcaggtgcggaagtgtgtttggatccgacgtcggagtccacacttcctcttcctattctctgtattcctccatttttgttctttttttcttttattttcaacagaaagagcagaagacgctggcttcgttcttccttcactatcaagggattattaatatctgcataattctagtcagcaggcaaacgtcttcaccttttcaacaggtgatgcttaattttggaacttttactgaattttgagagtatccgtatttcttgtgttccacctggaagtggtgtctcgtatgggatagtatcgattggcagaaaaatttgtcacctgagtcagaggaatgggtgcttgtgtatcaactccagcaattccaatcaaaatgaggaggaaatttcctggtcgccctagaaagtaccatggaaagaactcaaaatctgcttcgaaaataaatggcgatgcaggatcaatggttacagatattgctgttagtgagtttgttcacaaaactacgacctgcagaagatctgagtgctccaattctaaagttcatgttactcagatgcagtggcaccatagtcaaatagatgcaaatgttctttgccaggaggatgcatggtttgacacagtcagcatttttgagtctgactcagatgatgaattcagtagtgttcatggaggtcgagttttctcagtaaggaaatcaacaattataaggctctctctgagaacatctgttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="-" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="83026" stop="79821"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82726" g_stop="82509" g_length="218"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="226" r_length="226" r_score="0.872"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82508" i_stop="81866" i_length="643">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81865" g_stop="81811" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="227" r_stop="281" r_length="55" r_score="0.982"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81810" i_stop="81606" i_length="205">
            <donor d_prob="0.817" d_score="0.98"/>
            <acceptor a_prob="0.410" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="81605" g_stop="81564" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="282" r_stop="323" r_length="42" r_score="0.881"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="81563" i_stop="81325" i_length="239">
            <donor d_prob="0.866" d_score="0.88"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="81324" g_stop="80991" g_length="334"/>
          <reference_exon_boundary r_type="cDNA" r_start="324" r_stop="666" r_length="343" r_score="0.937"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="80990" i_stop="80686" i_length="305">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.954" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="80685" g_stop="80602" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="667" r_stop="750" r_length="84" r_score="0.988"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="80601" i_stop="80181" i_length="421">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.168" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="80180" g_stop="80121" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="751" r_stop="810" r_length="60" r_score="0.933"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="-" ref_id="SGN-E547818" ref_strand="+">
        <total_alignment_score>0.927</total_alignment_score>
        <cumulative_length_of_scored_exons>793</cumulative_length_of_scored_exons>
        <coverage percentage="0.979" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E547818" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82726" e_stop="82509"/>
          <exon e_start="81865" e_stop="81811"/>
          <exon e_start="81605" e_stop="81564"/>
          <exon e_start="81324" e_stop="80991"/>
          <exon e_start="80685" e_stop="80602"/>
          <exon e_start="80180" e_stop="80121"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAAAAAAACAAAAAAAAAATTAGTTGTGTGTATATATATA--TAT--ATATAAATAATAAGATCAGTTGGTAAACAGAGCAGGTGCGGAAGTGTGCTTGGATCCGGCGTCGGAGCCCACACTTCCTCTTCCTATTCTCTGTATTCCTCCA--TTT-TT-TTTTCTT-TTATACTTTCAACAGAAAGAGCCGAAGACGCTGCCTTCGTTCTTCCTTCACTATCAAGGTACGTCCCTTTTTTCTTCTGCTTATTTATTGGCACTGTTGTTGAATCGCATTTCATGGTTTCAAATGGAAGAATATTGTTTCGAATTTTTGCTTAATTATTGTTTTTAAGGATTCATAAATTGTTGTCATTATGGTTCTTCGTTTTCATATTTGGTTCTTATTTTGGGGTTTTCTGTTTTCACTTTCATTCATCTGAATTTCTACGGAAATACTTTTTTCTTTTTCTGTTGTTAAGATCATTATTGTTTTTGTTTATTTGTCTGTTGGGGTGCGTTTTATCCATTACCTTTTATGGATTTTGTCCTCTGCTTATTATGATGTGACCCATTTTGTTTTTTTTTTCAATTATAGCTGATCTGACATTTTTTAATTTGATTCAGTCTCCTAAAGTGAAAACAAACTCATCATGTTCATTCCATATCCTTTTGAAAAAGGCAAGGCAACTAATATAATTGTTTTTTCTTTAAAATAAAATAAAAAAAGTGGATGATAAACAGCTTATCTTGCCAATGGAGTATTTGGGGTTCGTTTCGTAGCTACTAAAGAGATAAATTGTTCATGTATTAGATTCTGCATAAGTTATGATGTTATATGATGTTCAATAACTAATTAGGATGTCATTAATGGAATAACTAATACATGGATTATTAATATCTGCATAATTCTAGTCAGCTGGCAAACGTCTTCACCTTTTCAGTTAATGTCTTCCTTCTCTTTTTCTTTTTCTTCTTTTCCATCTGCAAATCACATGAAACAACTGAAGTGCAGCTTGTAGAATTTATTTATTTAGATGTCTTTTGGGATTCATTGCAAGAAGTTGTCTATTTCAGGTCTTCAATAAATTTGTGAACTGCCAAATAAAGACTAATCTAATGTTGAGTAATTAAATGCTTCTTTGCAGATTGATGATGCTTAATTTTGGAACTTTTACTTAATTCTGAGAGTAAGACTTAAACTTCTTAAGCTCACTCTTCTTAAATTAGTCATTTTACATATCTTGTTGTTAGTTCATGCACATACCTATGACCGATAATTATTTTCACTTACCGAAATTTGGGGTATGAGTACTATTAGCGACATGGTCATTGAGGCTTCATATGTAACTGTCGCAAGTTGTCTGAGGTCGTTGTTGTACAGTACTATAACCAATCATTTAAAAAAATTCTCTTATTCATGTGCCAGGTATCCGTATTTCTTGTGTTCCACCTGGAAGTGGTGTCTCGTATGGGATAGTATTGATTGGCAGAAAAATTTGTCACCTGAGTCAGAGGAATGGGTGCTTGTGTATCAACTCCAGCAATTCCAATCAAAATGAGGAGGAAACTTCCTGGTCGCCCTAGAAAGTACCATGGAAAGAACTCAAAATCTGCTTCGAAAATAAATGGTGATGCAGGATCAATGGTTACAGATA-------T--TGAGTTTGTTCACAAAACTACGACCTGCAGAAGATCTGAGTGCTCCAATTCTAAAGTTCATGTTACTCAGATGCAGTGGCACCATAGTCAAATAGATGCAAATGGTATGTGATCTTTCTGTTTCTTATTTTGAACCTTATCCATTGCTTAGACTTTTGATTGATGACAAATCTATCAAATTTAACCATATTAACTGCGAATTTTATTTTGTTGATGGCCTTAAATATAGTTCATTGATCGATGGGTGTATTGTCTATATTGTGTGGTGATTTTCTGTTGCTAAGAAGGACCATGTGATTGTTCATTTTCCTTCAAAGCATTTTAAAAGGAGTTTAGTTGTTTGAGCAACTGACAAATCAGAATTATTTGACTACAACTTGCAATAATGAGCGGTTTACCTGCTTTGCAGTTCTTTGCCAGGAGGATGCATGGTTTGACACAGTCAGCATTTTTGAGTCTGACTCAGATGATGAATTCAGTAGTGTTAATGGAGGTAACTACTTTCGTATCTTCATTTTTATACTTATAGAGAATGACTTGCTCAGTGTTTGGACTAAGAACACATCTTCTTCTTTATACAGTGCTTGATTATTAATAGATAACGTGATCATTGGCTAGTTTTTATCCCTTTCATTTAGCTATTGTTATTTATGGGACGGGGTTTTTCATCTTATCTTTAGTGGAAATTTCTGAATGATTAATATTCTCGGAATACTTTTTGCTTTGTGAATCTTAGCAGTCCAAGGTTCTTATAGTCCTTCAGATCAATGTATTTAATTTAATCTATACCCCTTGCAACCTTACGTAGTTATGTACATGTGTTCACTCTCTCTATTACATATCATAGTCTTCTCTACCACAGCTAGTTACTTCCATGAGTTTCAGTGACAAGATCATTAATGCATCAAATTCAGGTCGAGTTTCTCAAGTAAGGAAATCAACAATTATAAGGCTCTCTCTGAGAACATCTGTTG</genome_strand>
        <mrna_strand>AGAAAAAAAACAAAAAAAAAA-TAGTTGTGTATATATATATAAATATAAATATAAATAATAAGATCAGTTGGTAAACAGAGCAGGTGCGGAAGTGTGTTTGGATCCGACGTCGGAGTCCACACTTCCTCTTCCTATTCTCTGTATTCCTCCATTTTTGTTCTTTTTTTCTTTTATTTTCAACAGAAAGAGCAGAAGACGCTGGCTTCGTTCTTCCTTCACTATCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATTATTAATATCTGCATAATTCTAGTCAGCAGGCAAACGTCTTCACCTTTTCA.............................................................................................................................................................................................................ACAGGTGATGCTTAATTTTGGAACTTTTACTGAATTTTGAGA...............................................................................................................................................................................................................................................GTATCCGTATTTCTTGTGTTCCACCTGGAAGTGGTGTCTCGTATGGGATAGTATCGATTGGCAGAAAAATTTGTCACCTGAGTCAGAGGAATGGGTGCTTGTGTATCAACTCCAGCAATTCCAATCAAAATGAGGAGGAAATTTCCTGGTCGCCCTAGAAAGTACCATGGAAAGAACTCAAAATCTGCTTCGAAAATAAATGGCGATGCAGGATCAATGGTTACAGATATTGCTGTTAGTGAGTTTGTTCACAAAACTACGACCTGCAGAAGATCTGAGTGCTCCAATTCTAAAGTTCATGTTACTCAGATGCAGTGGCACCATAGTCAAATAGATGCAAATG.................................................................................................................................................................................................................................................................................................................TTCTTTGCCAGGAGGATGCATGGTTTGACACAGTCAGCATTTTTGAGTCTGACTCAGATGATGAATTCAGTAGTGTTCATGGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGAGTTTTCTCAGTAAGGAAATCAACAATTATAAGGCTCTCTCTGAGAACATCTGTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E330473" ref_strand="+" ref_description="SGN-E330473 [cTOD-4-B22]">
      <seq>aataataagatcagttggtaaacagagcaggtgcggaagtgtgcttggatccggcgtcggagcccacacttcctcttcctattctctgtattcctccatttttttttcttttatactttcaacagaaagagccgaagacgctgccttcgttcttccttcactatcaagattgatgatgcttaattttggaacttttacttaattctgagagtatccgtatttcttgtgttccacctggaagtggtgtctcgtatgggatagtattgattggcagaaaaatttgtcacctgagtcagaggaatgggtgcttgtgtatcaactccagcaattccaatcaaaatgaggaggaaacttcctggtcgccctagaaagtaccatggaaagaactcaaaatctgcttcgaaaataaatggtgatgcaggatcaatggttacagatattgagtttgttcacaaaactacgacctgcagaagatctgagtgctccaattctaaagttcatgttactcagatgcagtggcaccatagtcaaatagatgcaaatgttctttgccaggaggatgcatggtttgacacagtcagcatttttgagtctgactcagatgatgaattcagtagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="-" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="82976" stop="80312"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82676" g_stop="82509" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="168" r_length="168" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82508" i_stop="81606" i_length="903">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.410" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81605" g_stop="81564" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="169" r_stop="210" r_length="42" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81563" i_stop="81325" i_length="239">
            <donor d_prob="0.866" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="81324" g_stop="80991" g_length="334"/>
          <reference_exon_boundary r_type="cDNA" r_start="211" r_stop="544" r_length="334" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="80990" i_stop="80686" i_length="305">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.954" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="80685" g_stop="80612" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="545" r_stop="618" r_length="74" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="-" ref_id="SGN-E330473" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>618</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E330473" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82676" e_stop="82509"/>
          <exon e_start="81605" e_stop="81564"/>
          <exon e_start="81324" e_stop="80991"/>
          <exon e_start="80685" e_stop="80612"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATAATAAGATCAGTTGGTAAACAGAGCAGGTGCGGAAGTGTGCTTGGATCCGGCGTCGGAGCCCACACTTCCTCTTCCTATTCTCTGTATTCCTCCATTTTTTTTTCTTTTATACTTTCAACAGAAAGAGCCGAAGACGCTGCCTTCGTTCTTCCTTCACTATCAAGGTACGTCCCTTTTTTCTTCTGCTTATTTATTGGCACTGTTGTTGAATCGCATTTCATGGTTTCAAATGGAAGAATATTGTTTCGAATTTTTGCTTAATTATTGTTTTTAAGGATTCATAAATTGTTGTCATTATGGTTCTTCGTTTTCATATTTGGTTCTTATTTTGGGGTTTTCTGTTTTCACTTTCATTCATCTGAATTTCTACGGAAATACTTTTTTCTTTTTCTGTTGTTAAGATCATTATTGTTTTTGTTTATTTGTCTGTTGGGGTGCGTTTTATCCATTACCTTTTATGGATTTTGTCCTCTGCTTATTATGATGTGACCCATTTTGTTTTTTTTTTCAATTATAGCTGATCTGACATTTTTTAATTTGATTCAGTCTCCTAAAGTGAAAACAAACTCATCATGTTCATTCCATATCCTTTTGAAAAAGGCAAGGCAACTAATATAATTGTTTTTTCTTTAAAATAAAATAAAAAAAGTGGATGATAAACAGCTTATCTTGCCAATGGAGTATTTGGGGTTCGTTTCGTAGCTACTAAAGAGATAAATTGTTCATGTATTAGATTCTGCATAAGTTATGATGTTATATGATGTTCAATAACTAATTAGGATGTCATTAATGGAATAACTAATACATGGATTATTAATATCTGCATAATTCTAGTCAGCTGGCAAACGTCTTCACCTTTTCAGTTAATGTCTTCCTTCTCTTTTTCTTTTTCTTCTTTTCCATCTGCAAATCACATGAAACAACTGAAGTGCAGCTTGTAGAATTTATTTATTTAGATGTCTTTTGGGATTCATTGCAAGAAGTTGTCTATTTCAGGTCTTCAATAAATTTGTGAACTGCCAAATAAAGACTAATCTAATGTTGAGTAATTAAATGCTTCTTTGCAGATTGATGATGCTTAATTTTGGAACTTTTACTTAATTCTGAGAGTAAGACTTAAACTTCTTAAGCTCACTCTTCTTAAATTAGTCATTTTACATATCTTGTTGTTAGTTCATGCACATACCTATGACCGATAATTATTTTCACTTACCGAAATTTGGGGTATGAGTACTATTAGCGACATGGTCATTGAGGCTTCATATGTAACTGTCGCAAGTTGTCTGAGGTCGTTGTTGTACAGTACTATAACCAATCATTTAAAAAAATTCTCTTATTCATGTGCCAGGTATCCGTATTTCTTGTGTTCCACCTGGAAGTGGTGTCTCGTATGGGATAGTATTGATTGGCAGAAAAATTTGTCACCTGAGTCAGAGGAATGGGTGCTTGTGTATCAACTCCAGCAATTCCAATCAAAATGAGGAGGAAACTTCCTGGTCGCCCTAGAAAGTACCATGGAAAGAACTCAAAATCTGCTTCGAAAATAAATGGTGATGCAGGATCAATGGTTACAGATATTGAGTTTGTTCACAAAACTACGACCTGCAGAAGATCTGAGTGCTCCAATTCTAAAGTTCATGTTACTCAGATGCAGTGGCACCATAGTCAAATAGATGCAAATGGTATGTGATCTTTCTGTTTCTTATTTTGAACCTTATCCATTGCTTAGACTTTTGATTGATGACAAATCTATCAAATTTAACCATATTAACTGCGAATTTTATTTTGTTGATGGCCTTAAATATAGTTCATTGATCGATGGGTGTATTGTCTATATTGTGTGGTGATTTTCTGTTGCTAAGAAGGACCATGTGATTGTTCATTTTCCTTCAAAGCATTTTAAAAGGAGTTTAGTTGTTTGAGCAACTGACAAATCAGAATTATTTGACTACAACTTGCAATAATGAGCGGTTTACCTGCTTTGCAGTTCTTTGCCAGGAGGATGCATGGTTTGACACAGTCAGCATTTTTGAGTCTGACTCAGATGATGAATTCAGTAGT</genome_strand>
        <mrna_strand>AATAATAAGATCAGTTGGTAAACAGAGCAGGTGCGGAAGTGTGCTTGGATCCGGCGTCGGAGCCCACACTTCCTCTTCCTATTCTCTGTATTCCTCCATTTTTTTTTCTTTTATACTTTCAACAGAAAGAGCCGAAGACGCTGCCTTCGTTCTTCCTTCACTATCAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATGATGCTTAATTTTGGAACTTTTACTTAATTCTGAGA...............................................................................................................................................................................................................................................GTATCCGTATTTCTTGTGTTCCACCTGGAAGTGGTGTCTCGTATGGGATAGTATTGATTGGCAGAAAAATTTGTCACCTGAGTCAGAGGAATGGGTGCTTGTGTATCAACTCCAGCAATTCCAATCAAAATGAGGAGGAAACTTCCTGGTCGCCCTAGAAAGTACCATGGAAAGAACTCAAAATCTGCTTCGAAAATAAATGGTGATGCAGGATCAATGGTTACAGATATTGAGTTTGTTCACAAAACTACGACCTGCAGAAGATCTGAGTGCTCCAATTCTAAAGTTCATGTTACTCAGATGCAGTGGCACCATAGTCAAATAGATGCAAATG.................................................................................................................................................................................................................................................................................................................TTCTTTGCCAGGAGGATGCATGGTTTGACACAGTCAGCATTTTTGAGTCTGACTCAGATGATGAATTCAGTAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E330437" ref_strand="+" ref_description="SGN-E330437 [cTOD-4-B11]">
      <seq>aataataagatcagttggtaaacagagcaggtgcggaagtgtgcttggatccggcgtcggagcccacacttcctcttcctattctctgtattcctccatttttttttcttttatactttcaacagaaagagccgaagacgctgccttcgttcttccttcactatcaagattgatgatgcttaattttggaacttttacttaattctgagagtatccgtatttcttgtgttccacctggaagtggtgtctcgtatgggatagtattgattggcagaaaaatttgtcacctgagtcagaggaatgggtgcttgtgtatcaactccagcaattccaatcaaaatgaggaggaaacttcctggtcgccctagaaagtaccatggaaagaactcaaaatctgcttcgaaaataaatggtgatgcaggatcaatggttacagatattgagtttgttcacaaaactacgacctgcagaagatctgagtgctccaattctaaagttcatgttactcagatgcagtggcaccatagtcaaatagatgcaaatgttctttgccaggaggatgcatggtttgacacagtcagcatttttgagtctgactcagatgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="-" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="82976" stop="80323"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82676" g_stop="82509" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="168" r_length="168" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82508" i_stop="81606" i_length="903">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.410" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81605" g_stop="81564" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="169" r_stop="210" r_length="42" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81563" i_stop="81325" i_length="239">
            <donor d_prob="0.866" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="81324" g_stop="80991" g_length="334"/>
          <reference_exon_boundary r_type="cDNA" r_start="211" r_stop="544" r_length="334" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="80990" i_stop="80686" i_length="305">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.954" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="80685" g_stop="80623" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="545" r_stop="607" r_length="63" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="-" ref_id="SGN-E330437" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>607</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E330437" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82676" e_stop="82509"/>
          <exon e_start="81605" e_stop="81564"/>
          <exon e_start="81324" e_stop="80991"/>
          <exon e_start="80685" e_stop="80623"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATAATAAGATCAGTTGGTAAACAGAGCAGGTGCGGAAGTGTGCTTGGATCCGGCGTCGGAGCCCACACTTCCTCTTCCTATTCTCTGTATTCCTCCATTTTTTTTTCTTTTATACTTTCAACAGAAAGAGCCGAAGACGCTGCCTTCGTTCTTCCTTCACTATCAAGGTACGTCCCTTTTTTCTTCTGCTTATTTATTGGCACTGTTGTTGAATCGCATTTCATGGTTTCAAATGGAAGAATATTGTTTCGAATTTTTGCTTAATTATTGTTTTTAAGGATTCATAAATTGTTGTCATTATGGTTCTTCGTTTTCATATTTGGTTCTTATTTTGGGGTTTTCTGTTTTCACTTTCATTCATCTGAATTTCTACGGAAATACTTTTTTCTTTTTCTGTTGTTAAGATCATTATTGTTTTTGTTTATTTGTCTGTTGGGGTGCGTTTTATCCATTACCTTTTATGGATTTTGTCCTCTGCTTATTATGATGTGACCCATTTTGTTTTTTTTTTCAATTATAGCTGATCTGACATTTTTTAATTTGATTCAGTCTCCTAAAGTGAAAACAAACTCATCATGTTCATTCCATATCCTTTTGAAAAAGGCAAGGCAACTAATATAATTGTTTTTTCTTTAAAATAAAATAAAAAAAGTGGATGATAAACAGCTTATCTTGCCAATGGAGTATTTGGGGTTCGTTTCGTAGCTACTAAAGAGATAAATTGTTCATGTATTAGATTCTGCATAAGTTATGATGTTATATGATGTTCAATAACTAATTAGGATGTCATTAATGGAATAACTAATACATGGATTATTAATATCTGCATAATTCTAGTCAGCTGGCAAACGTCTTCACCTTTTCAGTTAATGTCTTCCTTCTCTTTTTCTTTTTCTTCTTTTCCATCTGCAAATCACATGAAACAACTGAAGTGCAGCTTGTAGAATTTATTTATTTAGATGTCTTTTGGGATTCATTGCAAGAAGTTGTCTATTTCAGGTCTTCAATAAATTTGTGAACTGCCAAATAAAGACTAATCTAATGTTGAGTAATTAAATGCTTCTTTGCAGATTGATGATGCTTAATTTTGGAACTTTTACTTAATTCTGAGAGTAAGACTTAAACTTCTTAAGCTCACTCTTCTTAAATTAGTCATTTTACATATCTTGTTGTTAGTTCATGCACATACCTATGACCGATAATTATTTTCACTTACCGAAATTTGGGGTATGAGTACTATTAGCGACATGGTCATTGAGGCTTCATATGTAACTGTCGCAAGTTGTCTGAGGTCGTTGTTGTACAGTACTATAACCAATCATTTAAAAAAATTCTCTTATTCATGTGCCAGGTATCCGTATTTCTTGTGTTCCACCTGGAAGTGGTGTCTCGTATGGGATAGTATTGATTGGCAGAAAAATTTGTCACCTGAGTCAGAGGAATGGGTGCTTGTGTATCAACTCCAGCAATTCCAATCAAAATGAGGAGGAAACTTCCTGGTCGCCCTAGAAAGTACCATGGAAAGAACTCAAAATCTGCTTCGAAAATAAATGGTGATGCAGGATCAATGGTTACAGATATTGAGTTTGTTCACAAAACTACGACCTGCAGAAGATCTGAGTGCTCCAATTCTAAAGTTCATGTTACTCAGATGCAGTGGCACCATAGTCAAATAGATGCAAATGGTATGTGATCTTTCTGTTTCTTATTTTGAACCTTATCCATTGCTTAGACTTTTGATTGATGACAAATCTATCAAATTTAACCATATTAACTGCGAATTTTATTTTGTTGATGGCCTTAAATATAGTTCATTGATCGATGGGTGTATTGTCTATATTGTGTGGTGATTTTCTGTTGCTAAGAAGGACCATGTGATTGTTCATTTTCCTTCAAAGCATTTTAAAAGGAGTTTAGTTGTTTGAGCAACTGACAAATCAGAATTATTTGACTACAACTTGCAATAATGAGCGGTTTACCTGCTTTGCAGTTCTTTGCCAGGAGGATGCATGGTTTGACACAGTCAGCATTTTTGAGTCTGACTCAGATGATG</genome_strand>
        <mrna_strand>AATAATAAGATCAGTTGGTAAACAGAGCAGGTGCGGAAGTGTGCTTGGATCCGGCGTCGGAGCCCACACTTCCTCTTCCTATTCTCTGTATTCCTCCATTTTTTTTTCTTTTATACTTTCAACAGAAAGAGCCGAAGACGCTGCCTTCGTTCTTCCTTCACTATCAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATGATGCTTAATTTTGGAACTTTTACTTAATTCTGAGA...............................................................................................................................................................................................................................................GTATCCGTATTTCTTGTGTTCCACCTGGAAGTGGTGTCTCGTATGGGATAGTATTGATTGGCAGAAAAATTTGTCACCTGAGTCAGAGGAATGGGTGCTTGTGTATCAACTCCAGCAATTCCAATCAAAATGAGGAGGAAACTTCCTGGTCGCCCTAGAAAGTACCATGGAAAGAACTCAAAATCTGCTTCGAAAATAAATGGTGATGCAGGATCAATGGTTACAGATATTGAGTTTGTTCACAAAACTACGACCTGCAGAAGATCTGAGTGCTCCAATTCTAAAGTTCATGTTACTCAGATGCAGTGGCACCATAGTCAAATAGATGCAAATG.................................................................................................................................................................................................................................................................................................................TTCTTTGCCAGGAGGATGCATGGTTTGACACAGTCAGCATTTTTGAGTCTGACTCAGATGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E334599" ref_strand="+" ref_description="SGN-E334599 [cTOD-23-A6]">
      <seq>agaaaaaaaacaaaaaaaaaattagttgtgtgtatatatatatatatataaataataagatcagttggtaaacagagcaggtgcggaagtgtgcttggatccggcgtcggagcccacacttcctcttcctattctctgtattcctccatttttttttcttttatactttcaacagaaagagccgaagacgctgccttcgttcttccttcactatcaagattgatgatgcttaattttggaacttttacttaattctgagagtatccgtatttcttgtgttccacctggaagtggtgtctcgtatgggatagtattgattggcagaaaaatttgtcacctgagtcagaggaatgggtgcttgtgtatcaactccagcaattccaatcaaaatgaggaggaaacttcctggtcgccctagaaagtaccatggaaagaactcaaaatctgcttcgaaaataaatggtgatgcaggatcaatggttacagatattgagtttgttcacaaaactacgacctgcagaagatctgagtgctccaattctaaagttcatgttactcagatgcagtggcaccatagtcaaatagatgcaaatggtcttttgcaggaggatgcatggtttgacacagtcagcatttttgagtctgact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="-" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="83026" stop="80332"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82726" g_stop="82509" g_length="218"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="218" r_length="218" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82508" i_stop="81606" i_length="903">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.410" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81605" g_stop="81564" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="219" r_stop="260" r_length="42" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81563" i_stop="81325" i_length="239">
            <donor d_prob="0.866" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="81324" g_stop="80991" g_length="334"/>
          <reference_exon_boundary r_type="cDNA" r_start="261" r_stop="594" r_length="334" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="80990" i_stop="80686" i_length="305">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.954" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="80685" g_stop="80632" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="595" r_stop="648" r_length="54" r_score="0.944"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="-" ref_id="SGN-E334599" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>648</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E334599" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82726" e_stop="82509"/>
          <exon e_start="81605" e_stop="81564"/>
          <exon e_start="81324" e_stop="80991"/>
          <exon e_start="80685" e_stop="80632"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAAAAAAACAAAAAAAAAATTAGTTGTGTGTATATATATATATATATAAATAATAAGATCAGTTGGTAAACAGAGCAGGTGCGGAAGTGTGCTTGGATCCGGCGTCGGAGCCCACACTTCCTCTTCCTATTCTCTGTATTCCTCCATTTTTTTTTCTTTTATACTTTCAACAGAAAGAGCCGAAGACGCTGCCTTCGTTCTTCCTTCACTATCAAGGTACGTCCCTTTTTTCTTCTGCTTATTTATTGGCACTGTTGTTGAATCGCATTTCATGGTTTCAAATGGAAGAATATTGTTTCGAATTTTTGCTTAATTATTGTTTTTAAGGATTCATAAATTGTTGTCATTATGGTTCTTCGTTTTCATATTTGGTTCTTATTTTGGGGTTTTCTGTTTTCACTTTCATTCATCTGAATTTCTACGGAAATACTTTTTTCTTTTTCTGTTGTTAAGATCATTATTGTTTTTGTTTATTTGTCTGTTGGGGTGCGTTTTATCCATTACCTTTTATGGATTTTGTCCTCTGCTTATTATGATGTGACCCATTTTGTTTTTTTTTTCAATTATAGCTGATCTGACATTTTTTAATTTGATTCAGTCTCCTAAAGTGAAAACAAACTCATCATGTTCATTCCATATCCTTTTGAAAAAGGCAAGGCAACTAATATAATTGTTTTTTCTTTAAAATAAAATAAAAAAAGTGGATGATAAACAGCTTATCTTGCCAATGGAGTATTTGGGGTTCGTTTCGTAGCTACTAAAGAGATAAATTGTTCATGTATTAGATTCTGCATAAGTTATGATGTTATATGATGTTCAATAACTAATTAGGATGTCATTAATGGAATAACTAATACATGGATTATTAATATCTGCATAATTCTAGTCAGCTGGCAAACGTCTTCACCTTTTCAGTTAATGTCTTCCTTCTCTTTTTCTTTTTCTTCTTTTCCATCTGCAAATCACATGAAACAACTGAAGTGCAGCTTGTAGAATTTATTTATTTAGATGTCTTTTGGGATTCATTGCAAGAAGTTGTCTATTTCAGGTCTTCAATAAATTTGTGAACTGCCAAATAAAGACTAATCTAATGTTGAGTAATTAAATGCTTCTTTGCAGATTGATGATGCTTAATTTTGGAACTTTTACTTAATTCTGAGAGTAAGACTTAAACTTCTTAAGCTCACTCTTCTTAAATTAGTCATTTTACATATCTTGTTGTTAGTTCATGCACATACCTATGACCGATAATTATTTTCACTTACCGAAATTTGGGGTATGAGTACTATTAGCGACATGGTCATTGAGGCTTCATATGTAACTGTCGCAAGTTGTCTGAGGTCGTTGTTGTACAGTACTATAACCAATCATTTAAAAAAATTCTCTTATTCATGTGCCAGGTATCCGTATTTCTTGTGTTCCACCTGGAAGTGGTGTCTCGTATGGGATAGTATTGATTGGCAGAAAAATTTGTCACCTGAGTCAGAGGAATGGGTGCTTGTGTATCAACTCCAGCAATTCCAATCAAAATGAGGAGGAAACTTCCTGGTCGCCCTAGAAAGTACCATGGAAAGAACTCAAAATCTGCTTCGAAAATAAATGGTGATGCAGGATCAATGGTTACAGATATTGAGTTTGTTCACAAAACTACGACCTGCAGAAGATCTGAGTGCTCCAATTCTAAAGTTCATGTTACTCAGATGCAGTGGCACCATAGTCAAATAGATGCAAATGGTATGTGATCTTTCTGTTTCTTATTTTGAACCTTATCCATTGCTTAGACTTTTGATTGATGACAAATCTATCAAATTTAACCATATTAACTGCGAATTTTATTTTGTTGATGGCCTTAAATATAGTTCATTGATCGATGGGTGTATTGTCTATATTGTGTGGTGATTTTCTGTTGCTAAGAAGGACCATGTGATTGTTCATTTTCCTTCAAAGCATTTTAAAAGGAGTTTAGTTGTTTGAGCAACTGACAAATCAGAATTATTTGACTACAACTTGCAATAATGAGCGGTTTACCTGCTTTGCAGTTCTTTGCCAGGAGGATGCATGGTTTGACACAGTCAGCATTTTTGAGTCTGACT</genome_strand>
        <mrna_strand>AGAAAAAAAACAAAAAAAAAATTAGTTGTGTGTATATATATATATATATAAATAATAAGATCAGTTGGTAAACAGAGCAGGTGCGGAAGTGTGCTTGGATCCGGCGTCGGAGCCCACACTTCCTCTTCCTATTCTCTGTATTCCTCCATTTTTTTTTCTTTTATACTTTCAACAGAAAGAGCCGAAGACGCTGCCTTCGTTCTTCCTTCACTATCAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATGATGCTTAATTTTGGAACTTTTACTTAATTCTGAGA...............................................................................................................................................................................................................................................GTATCCGTATTTCTTGTGTTCCACCTGGAAGTGGTGTCTCGTATGGGATAGTATTGATTGGCAGAAAAATTTGTCACCTGAGTCAGAGGAATGGGTGCTTGTGTATCAACTCCAGCAATTCCAATCAAAATGAGGAGGAAACTTCCTGGTCGCCCTAGAAAGTACCATGGAAAGAACTCAAAATCTGCTTCGAAAATAAATGGTGATGCAGGATCAATGGTTACAGATATTGAGTTTGTTCACAAAACTACGACCTGCAGAAGATCTGAGTGCTCCAATTCTAAAGTTCATGTTACTCAGATGCAGTGGCACCATAGTCAAATAGATGCAAATG.................................................................................................................................................................................................................................................................................................................GTCTTTTGCAGGAGGATGCATGGTTTGACACAGTCAGCATTTTTGAGTCTGACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E362415" ref_strand="+" ref_description="SGN-E362415 [cLPP-10-L24]">
      <seq>tatatatataaatataaatataaataataagatcagttggtaaacagagcaggtgcggaagtgtgtttggatccgacgtcggagtccacacttcctcttcctattctctgtattcctccatttttgttctttttttcttttattttcaacagaaagagcagaagacgctggcttcgttcttccttcactatcaagacaggtgatgcttaattttggaacttttactgaattttgagagtatccgtatttcttgtgttccacctggaagtggtgtctcgtatgggatagtatcgattggcagaaaaatttgtcacctgagtcagaggaatgggtgcttgtgtatcaactccagcaattccaatcaaaatgaggaggaaatttcctggtcgccctagaaagtaccatggaaagaactcaaaatctgcttcgaaaataaatggcgatgcaggatcaatggttacagatattgctgttagtgagtttgttcacaaaactacgacctgcagaagatctgagtgctccaattctaaagttcatgttactcagatgcagtggcaccatagtcaaatagatgcaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="-" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="82998" stop="80692"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82698" g_stop="82509" g_length="190"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="195" r_length="195" r_score="0.884"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82508" i_stop="81606" i_length="903">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.410" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81605" g_stop="81564" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="196" r_stop="237" r_length="42" r_score="0.881"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81563" i_stop="81325" i_length="239">
            <donor d_prob="0.866" d_score="0.88"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="81324" g_stop="80992" g_length="333"/>
          <reference_exon_boundary r_type="cDNA" r_start="238" r_stop="579" r_length="342" r_score="0.937"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="-" ref_id="SGN-E362415" ref_strand="+">
        <total_alignment_score>0.918</total_alignment_score>
        <cumulative_length_of_scored_exons>565</cumulative_length_of_scored_exons>
        <coverage percentage="0.976" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E362415" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82698" e_stop="82509"/>
          <exon e_start="81605" e_stop="81564"/>
          <exon e_start="81324" e_stop="80992"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTGTATATATATATATATATAAATAATAAGATCAGTTGGTAAACAGAGCAGGTGCGGAAGTGTGCTTGGATCCGGCGTCGGAGCCCACACTTCCTCTTCCTATTCTCTGTATTCCTCCATTTTT-TT-TTCTTTT-A--TACTTTCAACAGAAAGAGCCGAAGACGCTGCCTTCGTTCTTCCTTCACTATCAAGGTACGTCCCTTTTTTCTTCTGCTTATTTATTGGCACTGTTGTTGAATCGCATTTCATGGTTTCAAATGGAAGAATATTGTTTCGAATTTTTGCTTAATTATTGTTTTTAAGGATTCATAAATTGTTGTCATTATGGTTCTTCGTTTTCATATTTGGTTCTTATTTTGGGGTTTTCTGTTTTCACTTTCATTCATCTGAATTTCTACGGAAATACTTTTTTCTTTTTCTGTTGTTAAGATCATTATTGTTTTTGTTTATTTGTCTGTTGGGGTGCGTTTTATCCATTACCTTTTATGGATTTTGTCCTCTGCTTATTATGATGTGACCCATTTTGTTTTTTTTTTCAATTATAGCTGATCTGACATTTTTTAATTTGATTCAGTCTCCTAAAGTGAAAACAAACTCATCATGTTCATTCCATATCCTTTTGAAAAAGGCAAGGCAACTAATATAATTGTTTTTTCTTTAAAATAAAATAAAAAAAGTGGATGATAAACAGCTTATCTTGCCAATGGAGTATTTGGGGTTCGTTTCGTAGCTACTAAAGAGATAAATTGTTCATGTATTAGATTCTGCATAAGTTATGATGTTATATGATGTTCAATAACTAATTAGGATGTCATTAATGGAATAACTAATACATGGATTATTAATATCTGCATAATTCTAGTCAGCTGGCAAACGTCTTCACCTTTTCAGTTAATGTCTTCCTTCTCTTTTTCTTTTTCTTCTTTTCCATCTGCAAATCACATGAAACAACTGAAGTGCAGCTTGTAGAATTTATTTATTTAGATGTCTTTTGGGATTCATTGCAAGAAGTTGTCTATTTCAGGTCTTCAATAAATTTGTGAACTGCCAAATAAAGACTAATCTAATGTTGAGTAATTAAATGCTTCTTTGCAGATTGATGATGCTTAATTTTGGAACTTTTACTTAATTCTGAGAGTAAGACTTAAACTTCTTAAGCTCACTCTTCTTAAATTAGTCATTTTACATATCTTGTTGTTAGTTCATGCACATACCTATGACCGATAATTATTTTCACTTACCGAAATTTGGGGTATGAGTACTATTAGCGACATGGTCATTGAGGCTTCATATGTAACTGTCGCAAGTTGTCTGAGGTCGTTGTTGTACAGTACTATAACCAATCATTTAAAAAAATTCTCTTATTCATGTGCCAGGTATCCGTATTTCTTGTGTTCCACCTGGAAGTGGTGTCTCGTATGGGATAGTATTGATTGGCAGAAAAATTTGTCACCTGAGTCAGAGGAATGGGTGCTTGTGTATCAACTCCAGCAATTCCAATCAAAATGAGGAGGAAACTTCCTGGTCGCCCTAGAAAGTACCATGGAAAGAACTCAAAATCTGCTTCGAAAATAAATGGTGATGCAGGATCAATGGTTACAGATA-------T--TGAGTTTGTTCACAAAACTACGACCTGCAGAAGATCTGAGTGCTCCAATTCTAAAGTTCATGTTACTCAGATGCAGTGGCACCATAGTCAAATAGATGCAAAT</genome_strand>
        <mrna_strand>TATATATATAAATATAAATATAAATAATAAGATCAGTTGGTAAACAGAGCAGGTGCGGAAGTGTGTTTGGATCCGACGTCGGAGTCCACACTTCCTCTTCCTATTCTCTGTATTCCTCCATTTTTGTTCTTTTTTTCTTTTATTTTCAACAGAAAGAGCAGAAGACGCTGGCTTCGTTCTTCCTTCACTATCAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGGTGATGCTTAATTTTGGAACTTTTACTGAATTTTGAGA...............................................................................................................................................................................................................................................GTATCCGTATTTCTTGTGTTCCACCTGGAAGTGGTGTCTCGTATGGGATAGTATCGATTGGCAGAAAAATTTGTCACCTGAGTCAGAGGAATGGGTGCTTGTGTATCAACTCCAGCAATTCCAATCAAAATGAGGAGGAAATTTCCTGGTCGCCCTAGAAAGTACCATGGAAAGAACTCAAAATCTGCTTCGAAAATAAATGGCGATGCAGGATCAATGGTTACAGATATTGCTGTTAGTGAGTTTGTTCACAAAACTACGACCTGCAGAAGATCTGAGTGCTCCAATTCTAAAGTTCATGTTACTCAGATGCAGTGGCACCATAGTCAAATAGATGCAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E362097" ref_strand="+" ref_description="SGN-E362097 [cLPP-11-C2]">
      <seq>ttttcaacaggtgatgcttaattttggaacttttactgaattttgagagtatccgtatttcttgtgttccacctggaagtggtgtctcgtatgggatagtatcgattggcagaaaaatttgtcacctgagtcagaggaatgggtgcttgtgtatcaactccagcaattccaatcaaaatgaggaggaaatttcctggtcgccctagaaagtaccatggaaagaactcaaaatctgcttcgaaaataaatggcgatgcaggatcaatggttacagatattgctgttagtgagtttgttcacaaaactacgacctgcagaagatctgagtgctccaattctaaagttcatgttactc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="-" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="81912" stop="80727"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81816" g_stop="81811" g_length="6"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="6" r_length="6" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81810" i_stop="81606" i_length="205">
            <donor d_prob="0.817" d_score="0.00"/>
            <acceptor a_prob="0.410" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81605" g_stop="81564" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="7" r_stop="48" r_length="42" r_score="0.881"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81563" i_stop="81325" i_length="239">
            <donor d_prob="0.866" d_score="0.88"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="81324" g_stop="81027" g_length="298"/>
          <reference_exon_boundary r_type="cDNA" r_start="49" r_stop="355" r_length="307" r_score="0.930"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="-" ref_id="SGN-E362097" ref_strand="+">
        <total_alignment_score>0.930</total_alignment_score>
        <cumulative_length_of_scored_exons>346</cumulative_length_of_scored_exons>
        <coverage percentage="0.975" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E362097" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81816" e_stop="81811"/>
          <exon e_start="81605" e_stop="81564"/>
          <exon e_start="81324" e_stop="81027"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTCAGTTAATGTCTTCCTTCTCTTTTTCTTTTTCTTCTTTTCCATCTGCAAATCACATGAAACAACTGAAGTGCAGCTTGTAGAATTTATTTATTTAGATGTCTTTTGGGATTCATTGCAAGAAGTTGTCTATTTCAGGTCTTCAATAAATTTGTGAACTGCCAAATAAAGACTAATCTAATGTTGAGTAATTAAATGCTTCTTTGCAGATTGATGATGCTTAATTTTGGAACTTTTACTTAATTCTGAGAGTAAGACTTAAACTTCTTAAGCTCACTCTTCTTAAATTAGTCATTTTACATATCTTGTTGTTAGTTCATGCACATACCTATGACCGATAATTATTTTCACTTACCGAAATTTGGGGTATGAGTACTATTAGCGACATGGTCATTGAGGCTTCATATGTAACTGTCGCAAGTTGTCTGAGGTCGTTGTTGTACAGTACTATAACCAATCATTTAAAAAAATTCTCTTATTCATGTGCCAGGTATCCGTATTTCTTGTGTTCCACCTGGAAGTGGTGTCTCGTATGGGATAGTATTGATTGGCAGAAAAATTTGTCACCTGAGTCAGAGGAATGGGTGCTTGTGTATCAACTCCAGCAATTCCAATCAAAATGAGGAGGAAACTTCCTGGTCGCCCTAGAAAGTACCATGGAAAGAACTCAAAATCTGCTTCGAAAATAAATGGTGATGCAGGATCAATGGTTACAGATA-------T--TGAGTTTGTTCACAAAACTACGACCTGCAGAAGATCTGAGTGCTCCAATTCTAAAGTTCATGTTACTC</genome_strand>
        <mrna_strand>TTTTCA.............................................................................................................................................................................................................ACAGGTGATGCTTAATTTTGGAACTTTTACTGAATTTTGAGA...............................................................................................................................................................................................................................................GTATCCGTATTTCTTGTGTTCCACCTGGAAGTGGTGTCTCGTATGGGATAGTATCGATTGGCAGAAAAATTTGTCACCTGAGTCAGAGGAATGGGTGCTTGTGTATCAACTCCAGCAATTCCAATCAAAATGAGGAGGAAATTTCCTGGTCGCCCTAGAAAGTACCATGGAAAGAACTCAAAATCTGCTTCGAAAATAAATGGCGATGCAGGATCAATGGTTACAGATATTGCTGTTAGTGAGTTTGTTCACAAAACTACGACCTGCAGAAGATCTGAGTGCTCCAATTCTAAAGTTCATGTTACTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E359618" ref_strand="+" ref_description="SGN-E359618 [cLPP-5-H21]">
      <seq>aatataaatataaataataagatcagttggtaaacagagcaggtgcggaagtgtgtttggatccgacgtcggagtccacacttcctcttcctattctctgtattcctccatttttgttctttttttcttttattttcaacagaaagagcagaagacgctggcttcgttcttccttcactatcaagacaggtgatgcttaattttggaacttttactgaattttgagagtatccgtatttcttgtgttccacctggaagtggtgtctcgtatgggatagtatcgattggcagaaaaatttgtcacctgagtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="-" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="82987" stop="80941"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82688" g_stop="82509" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="185" r_length="185" r_score="0.889"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82508" i_stop="81606" i_length="903">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.410" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81605" g_stop="81564" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="186" r_stop="227" r_length="42" r_score="0.881"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81563" i_stop="81325" i_length="239">
            <donor d_prob="0.866" d_score="0.88"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="81324" g_stop="81241" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="228" r_stop="311" r_length="84" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="-" ref_id="SGN-E359618" ref_strand="+">
        <total_alignment_score>0.920</total_alignment_score>
        <cumulative_length_of_scored_exons>306</cumulative_length_of_scored_exons>
        <coverage percentage="0.984" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E359618" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82688" e_stop="82509"/>
          <exon e_start="81605" e_stop="81564"/>
          <exon e_start="81324" e_stop="81241"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATATATATATAAATAATAAGATCAGTTGGTAAACAGAGCAGGTGCGGAAGTGTGCTTGGATCCGGCGTCGGAGCCCACACTTCCTCTTCCTATTCTCTGTATTCCTCCA--TTT-TT-TTTTCTT-TTATACTTTCAACAGAAAGAGCCGAAGACGCTGCCTTCGTTCTTCCTTCACTATCAAGGTACGTCCCTTTTTTCTTCTGCTTATTTATTGGCACTGTTGTTGAATCGCATTTCATGGTTTCAAATGGAAGAATATTGTTTCGAATTTTTGCTTAATTATTGTTTTTAAGGATTCATAAATTGTTGTCATTATGGTTCTTCGTTTTCATATTTGGTTCTTATTTTGGGGTTTTCTGTTTTCACTTTCATTCATCTGAATTTCTACGGAAATACTTTTTTCTTTTTCTGTTGTTAAGATCATTATTGTTTTTGTTTATTTGTCTGTTGGGGTGCGTTTTATCCATTACCTTTTATGGATTTTGTCCTCTGCTTATTATGATGTGACCCATTTTGTTTTTTTTTTCAATTATAGCTGATCTGACATTTTTTAATTTGATTCAGTCTCCTAAAGTGAAAACAAACTCATCATGTTCATTCCATATCCTTTTGAAAAAGGCAAGGCAACTAATATAATTGTTTTTTCTTTAAAATAAAATAAAAAAAGTGGATGATAAACAGCTTATCTTGCCAATGGAGTATTTGGGGTTCGTTTCGTAGCTACTAAAGAGATAAATTGTTCATGTATTAGATTCTGCATAAGTTATGATGTTATATGATGTTCAATAACTAATTAGGATGTCATTAATGGAATAACTAATACATGGATTATTAATATCTGCATAATTCTAGTCAGCTGGCAAACGTCTTCACCTTTTCAGTTAATGTCTTCCTTCTCTTTTTCTTTTTCTTCTTTTCCATCTGCAAATCACATGAAACAACTGAAGTGCAGCTTGTAGAATTTATTTATTTAGATGTCTTTTGGGATTCATTGCAAGAAGTTGTCTATTTCAGGTCTTCAATAAATTTGTGAACTGCCAAATAAAGACTAATCTAATGTTGAGTAATTAAATGCTTCTTTGCAGATTGATGATGCTTAATTTTGGAACTTTTACTTAATTCTGAGAGTAAGACTTAAACTTCTTAAGCTCACTCTTCTTAAATTAGTCATTTTACATATCTTGTTGTTAGTTCATGCACATACCTATGACCGATAATTATTTTCACTTACCGAAATTTGGGGTATGAGTACTATTAGCGACATGGTCATTGAGGCTTCATATGTAACTGTCGCAAGTTGTCTGAGGTCGTTGTTGTACAGTACTATAACCAATCATTTAAAAAAATTCTCTTATTCATGTGCCAGGTATCCGTATTTCTTGTGTTCCACCTGGAAGTGGTGTCTCGTATGGGATAGTATTGATTGGCAGAAAAATTTGTCACCTGAGTC</genome_strand>
        <mrna_strand>AATATAAATATAAATAATAAGATCAGTTGGTAAACAGAGCAGGTGCGGAAGTGTGTTTGGATCCGACGTCGGAGTCCACACTTCCTCTTCCTATTCTCTGTATTCCTCCATTTTTGTTCTTTTTTTCTTTTATTTTCAACAGAAAGAGCAGAAGACGCTGGCTTCGTTCTTCCTTCACTATCAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGGTGATGCTTAATTTTGGAACTTTTACTGAATTTTGAGA...............................................................................................................................................................................................................................................GTATCCGTATTTCTTGTGTTCCACCTGGAAGTGGTGTCTCGTATGGGATAGTATCGATTGGCAGAAAAATTTGTCACCTGAGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E364426" ref_strand="+" ref_description="SGN-E364426 [cLPP-20-D18]">
      <seq>gaaaaaaaacaaagaaaaaatagtggtgtatatatatataaatataaatataaataataagatcagttggtaaacagagcaggtgcggaagtgtgtttggatccgacgtcggagtccacacttcctcttcctattctctgtattcctccatttttgttctttttttcttttattttcaacagaaagagcagaagacgctggcttcgttcttccttcactatcaagggattattaatatctgcataattctagtcagcaggcaaacgtcttcaccttttcaacaggtgatgcttaattttggaacttttactgaattttgagagtatccgtatttcttgtgttccacctggaagtggtgtctagtatgggatagtatcgattggcataaaaatttgtcacctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="-" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="83025" stop="80945"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82725" g_stop="82509" g_length="217"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="225" r_length="225" r_score="0.857"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82508" i_stop="81866" i_length="643">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81865" g_stop="81811" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="226" r_stop="280" r_length="55" r_score="0.982"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81810" i_stop="81606" i_length="205">
            <donor d_prob="0.817" d_score="0.98"/>
            <acceptor a_prob="0.410" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="81605" g_stop="81564" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="281" r_stop="322" r_length="42" r_score="0.881"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="81563" i_stop="81325" i_length="239">
            <donor d_prob="0.866" d_score="0.88"/>
            <acceptor a_prob="0.976" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="81324" g_stop="81245" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="323" r_stop="402" r_length="80" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="-" ref_id="SGN-E364426" ref_strand="+">
        <total_alignment_score>0.901</total_alignment_score>
        <cumulative_length_of_scored_exons>394</cumulative_length_of_scored_exons>
        <coverage percentage="0.980" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E364426" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82725" e_stop="82509"/>
          <exon e_start="81865" e_stop="81811"/>
          <exon e_start="81605" e_stop="81564"/>
          <exon e_start="81324" e_stop="81245"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAAAAAACAAAAAAAAAAT--TAGT-TGTGTGTATATATATATATATATAAATAATAAGATCAGTTGGTAAACAGAGCAGGTGCGGAAGTGTGCTTGGATCCGGCGTCGGAGCCCACACTTCCTCTTCCTATTCTCTGTATTCCTCCA--TTT-TT-TTTTCTT-TTATACTTTCAACAGAAAGAGCCGAAGACGCTGCCTTCGTTCTTCCTTCACTATCAAGGTACGTCCCTTTTTTCTTCTGCTTATTTATTGGCACTGTTGTTGAATCGCATTTCATGGTTTCAAATGGAAGAATATTGTTTCGAATTTTTGCTTAATTATTGTTTTTAAGGATTCATAAATTGTTGTCATTATGGTTCTTCGTTTTCATATTTGGTTCTTATTTTGGGGTTTTCTGTTTTCACTTTCATTCATCTGAATTTCTACGGAAATACTTTTTTCTTTTTCTGTTGTTAAGATCATTATTGTTTTTGTTTATTTGTCTGTTGGGGTGCGTTTTATCCATTACCTTTTATGGATTTTGTCCTCTGCTTATTATGATGTGACCCATTTTGTTTTTTTTTTCAATTATAGCTGATCTGACATTTTTTAATTTGATTCAGTCTCCTAAAGTGAAAACAAACTCATCATGTTCATTCCATATCCTTTTGAAAAAGGCAAGGCAACTAATATAATTGTTTTTTCTTTAAAATAAAATAAAAAAAGTGGATGATAAACAGCTTATCTTGCCAATGGAGTATTTGGGGTTCGTTTCGTAGCTACTAAAGAGATAAATTGTTCATGTATTAGATTCTGCATAAGTTATGATGTTATATGATGTTCAATAACTAATTAGGATGTCATTAATGGAATAACTAATACATGGATTATTAATATCTGCATAATTCTAGTCAGCTGGCAAACGTCTTCACCTTTTCAGTTAATGTCTTCCTTCTCTTTTTCTTTTTCTTCTTTTCCATCTGCAAATCACATGAAACAACTGAAGTGCAGCTTGTAGAATTTATTTATTTAGATGTCTTTTGGGATTCATTGCAAGAAGTTGTCTATTTCAGGTCTTCAATAAATTTGTGAACTGCCAAATAAAGACTAATCTAATGTTGAGTAATTAAATGCTTCTTTGCAGATTGATGATGCTTAATTTTGGAACTTTTACTTAATTCTGAGAGTAAGACTTAAACTTCTTAAGCTCACTCTTCTTAAATTAGTCATTTTACATATCTTGTTGTTAGTTCATGCACATACCTATGACCGATAATTATTTTCACTTACCGAAATTTGGGGTATGAGTACTATTAGCGACATGGTCATTGAGGCTTCATATGTAACTGTCGCAAGTTGTCTGAGGTCGTTGTTGTACAGTACTATAACCAATCATTTAAAAAAATTCTCTTATTCATGTGCCAGGTATCCGTATTTCTTGTGTTCCACCTGGAAGTGGTGTCTCGTATGGGATAGTATTGATTGGCAGAAAAATTTGTCACCTG</genome_strand>
        <mrna_strand>GAAAAAAAACAAAGAAAAAATAGTGGTGTATATATATATAAATATAAATATAAATAATAAGATCAGTTGGTAAACAGAGCAGGTGCGGAAGTGTGTTTGGATCCGACGTCGGAGTCCACACTTCCTCTTCCTATTCTCTGTATTCCTCCATTTTTGTTCTTTTTTTCTTTTATTTTCAACAGAAAGAGCAGAAGACGCTGGCTTCGTTCTTCCTTCACTATCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATTATTAATATCTGCATAATTCTAGTCAGCAGGCAAACGTCTTCACCTTTTCA.............................................................................................................................................................................................................ACAGGTGATGCTTAATTTTGGAACTTTTACTGAATTTTGAGA...............................................................................................................................................................................................................................................GTATCCGTATTTCTTGTGTTCCACCTGGAAGTGGTGTCTAGTATGGGATAGTATCGATTGGCATAAAAATTTGTCACCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E540820" ref_strand="+" ref_description="SGN-E540820 [TUS-61-E18](-)">
      <seq>gtttcatgagagactagccacagcttatcaagatccagcactgctgcatgtcggatattctggaaataatgcaagtatcattgccccccttcttggtactgctgaagttgatgcttagggtgtaatcgagttattgcttactgtaatcatgtaacacttttagttggcaaacatgtgggtatgtagtttgagttcaatctgctagtctgtataactccaactttttggttcagtactttggataactccactttctagttgacactgtattagatagtcaaaggtataactttttactgtcaagagacttgatcaagaatctgcataccagaaagtccacaactaactataaaggcctgatccttcaggaactttaatgcctatttttattcttatatggaggaactagaaaaggtcaaatgtgcatcaccccaaagctacttgaattggtcaattatttgcagtgatcatgaagtgcaaacaattgcattaaagagattcatatttgtgcctgacgtctccatttgtgcgtgagaactttttggctttcagtttttaatgccttctcgttggaatcttatcagtccctttctgaacgaatgataattaatgaactattatacatcaagttacatcacaagcactagaagaattgttaatcgttttggaacttccatgtggaggattcggagtggctgttgacatttcttttcttgattatgtgaaaaaatcagctttaagcctgaccaaaaaaaaaaaaaaaaaagaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="-" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="89938" stop="88589"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="89639" g_stop="88890" g_length="750"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="749" r_length="749" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="750" polyA_stop="772"/>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="-" ref_id="SGN-E540820" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>750</cumulative_length_of_scored_exons>
        <coverage percentage="0.972" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E540820" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="89639" e_stop="88890"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTCATGAGAGACTAGCCACAGCTTATCAAGATCCAGCACTGCTGCATGTCGGATATTCTGGAAATAATGCAAGTATCATTGCCCCCCTTCTTGGTACTGCTGAAGTTGATGCTTAGGGTGTAATCGAGTTATTGCTTACTGTAATCATGTAACACTTTTAGTTGGCAAACATGTGGGTATGTAGTTTGAGTTCAATCTGCTAGTCTGTATAACTCCAACTTTTTGGTTCAGTACTTTGGATAACTCCACTTTCTAGTTGACACTGTATTAGATAGTCAAAGGTATAACTTTTTACTGTCAAGAGACTTGATCAAGAATCTGCATACCAGAAAGTCCACAACTAACTATAAAGGCCTGATCCTTCAGGAACTTTAATGCCTATTTTTATTCTTATATGGAGGAACTAGAAAAGGTCAAATGTGCATCACCCCAAAGCTACTTGAATTGGTCAATTATTTGCAGTGATCATGAAGTGCAAACAATTGCATTAAAGAGATTCATATTTGTGCCTGACGTCTCCATTTGTGCGTGAGAACTTTTTGGCTTTCAGTTTTTAATGCCTTCTCGTTGGAATCTTATCAGTCCCTTTCTGAACGAATGATAATTAATGAACTATTATACATCAAGTTACATCACAAGCACTAGAAGAATTGTTAATCGTTTTGGAACTTCCATGTGGAGGATTCGGAGTGGCTGTTGACATTTCTTTTCTTGATTATGTTGAAAAAATCAGCTTTAAGCCTGACCA</genome_strand>
        <mrna_strand>GTTTCATGAGAGACTAGCCACAGCTTATCAAGATCCAGCACTGCTGCATGTCGGATATTCTGGAAATAATGCAAGTATCATTGCCCCCCTTCTTGGTACTGCTGAAGTTGATGCTTAGGGTGTAATCGAGTTATTGCTTACTGTAATCATGTAACACTTTTAGTTGGCAAACATGTGGGTATGTAGTTTGAGTTCAATCTGCTAGTCTGTATAACTCCAACTTTTTGGTTCAGTACTTTGGATAACTCCACTTTCTAGTTGACACTGTATTAGATAGTCAAAGGTATAACTTTTTACTGTCAAGAGACTTGATCAAGAATCTGCATACCAGAAAGTCCACAACTAACTATAAAGGCCTGATCCTTCAGGAACTTTAATGCCTATTTTTATTCTTATATGGAGGAACTAGAAAAGGTCAAATGTGCATCACCCCAAAGCTACTTGAATTGGTCAATTATTTGCAGTGATCATGAAGTGCAAACAATTGCATTAAAGAGATTCATATTTGTGCCTGACGTCTCCATTTGTGCGTGAGAACTTTTTGGCTTTCAGTTTTTAATGCCTTCTCGTTGGAATCTTATCAGTCCCTTTCTGAACGAATGATAATTAATGAACTATTATACATCAAGTTACATCACAAGCACTAGAAGAATTGTTAATCGTTTTGGAACTTCCATGTGGAGGATTCGGAGTGGCTGTTGACATTTCTTTTCTTGATTATG-TGAAAAAATCAGCTTTAAGCCTGACCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E366369" ref_strand="+" ref_description="SGN-E366369 [cLPT-1-K23](-)">
      <seq>aagtatgagactggtggaaagttgtggcctatagtacatgattctatgattttctccttgatactgatgcatgttatagccattggaatatttgggctaaagaaacttcctctcgcttcaagcttaacagttcctcttccaatccttactcttgtgttcaacagctattgtaggagacgcttcctacctatgttcaagtcttattcagtcgagagtttgctaaaaaaggataaagaggagcaaaatgatcctacagttgcaagttttcatgagagactagccacagcatatcaagatccagcactgctgcatgtcggatattctggaaataatgcaagtatcattgccccccttcttggtactgctgaagttgatgcttagggtgtaatcgagctattgcttactgtaatcatttaacacttttagttggcaaacatgtgggtatgtagtttgagttcaatctgctagtttgtataactccaactttttagttcagtactttggataactccactttctagttgacactgtcttggatagtcaaaggtatatttttttactgtcaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="-" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="90983" stop="89033"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90683" g_stop="90471" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="213" r_length="213" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90470" i_stop="89690" i_length="781">
            <donor d_prob="0.956" d_score="1.00"/>
            <acceptor a_prob="0.518" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89689" g_stop="89324" g_length="366"/>
          <reference_exon_boundary r_type="cDNA" r_start="214" r_stop="579" r_length="366" r_score="0.951"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="-" ref_id="SGN-E366369" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>579</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E366369" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90683" e_stop="90471"/>
          <exon e_start="89689" e_stop="89324"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGTATGAGACTGGTGGAAAGTTGTGGCCTATAGTACATGATTCTATGATTTTCTCCTTGATACTGATGCATGTTATAGCCATTGGAATATTTGGGCTAAAGAAACTTCCTCTCGCTTCAAGCTTAACAGTTCCTCTTCCAATCCTTACTCTTGTGTTCAACAGCTATTGTAGGAGACGCTTCCTACCTATGTTCAAGTCTTATTCAGTCGAGGTACATCTGCCTTGTTCTTTACTTGTTTTGTAGCTCGTGGTTTATATAGCTGAACTCATAGAGTTCTCCTCTGCAGATCTTATTAGTCATTAATAAGCACCTAGTGCGGAAGTTGTTTCTTTTCTTTTAGCCATTGTTGATATGATAGTCCTTTTGGGGTTCTTGGAGAATTCAATTGACTTGGCAAACTTTTTGATTTGACAATTGCCCTATTTGGTAACTTTGTGAATCTGAACATAGCTCCCATGCAATTCTTGCAGAATATTGAGAAGCATTTAAACATACTATAAATAGAACTGCTAACCATCTGTTGTCTGGTCTCAGTAACATATATGCAGCAATTTAGAACACAGTTGCTGATAGCTGCACTTAATAAAGGGCGTTATATCTTGCATCCCGTGACTACATTGATGATGCATATTAGTGAACAGTCAAATGTACATTATTTAATGAATGTCTAAGTGACTTGATTGCTTATTTTAATGTAAGTCAAGGAGGATTACTGTGCTTGGCTAGCAAGTCATTGCAACTGTAACACTCGGATAGGTGACATTGAGCAAAATGTTTGCATTGAGCGCATTGCATAATCTAAATATGAATATTATCACATATTTTAGATTCCATATACGTTGCTATAGAACCTGAGATATTTATGAAAATGATTACATGCTCTAGTGATTGAGCAGTCTTGTCAATTCTAAAAGTTGTATAGGCTCCTTATTTGAGTTGTCATTTCCTAACATGTAATGAATGTTTTTCTGCCTTTCTATGAGCGCTTCAGAGTTTGCTAAAAAAGGATAAAGAGGAGCAAAATGATCCTACAATTGCAAGTTTTCATGAGAGACTAGCCACAGCTTATCAAGATCCAGCACTGCTGCATGTCGGATATTCTGGAAATAATGCAAGTATCATTGCCCCCCTTCTTGGTACTGCTGAAGTTGATGCTTAGGGTGTAATCGAGTTATTGCTTACTGTAATCATGTAACACTTTTAGTTGGCAAACATGTGGGTATGTAGTTTGAGTTCAATCTGCTAGTCTGTATAACTCCAACTTTTTGGTTCAGTACTTTGGATAACTCCACTTTCTAGTTGACACTGTATTAGATAGTCAAAGGTATAACTTTTTACTGTCAAGAGACTTGATCAA</genome_strand>
        <mrna_strand>AAGTATGAGACTGGTGGAAAGTTGTGGCCTATAGTACATGATTCTATGATTTTCTCCTTGATACTGATGCATGTTATAGCCATTGGAATATTTGGGCTAAAGAAACTTCCTCTCGCTTCAAGCTTAACAGTTCCTCTTCCAATCCTTACTCTTGTGTTCAACAGCTATTGTAGGAGACGCTTCCTACCTATGTTCAAGTCTTATTCAGTCGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTTGCTAAAAAAGGATAAAGAGGAGCAAAATGATCCTACAGTTGCAAGTTTTCATGAGAGACTAGCCACAGCATATCAAGATCCAGCACTGCTGCATGTCGGATATTCTGGAAATAATGCAAGTATCATTGCCCCCCTTCTTGGTACTGCTGAAGTTGATGCTTAGGGTGTAATCGAGCTATTGCTTACTGTAATCATTTAACACTTTTAGTTGGCAAACATGTGGGTATGTAGTTTGAGTTCAATCTGCTAGTTTGTATAACTCCAACTTTTTAGTTCAGTACTTTGGATAACTCCACTTTCTAGTTGACACTGTCTTGGATAGTCAAAGGTATATTTTTTTACTGTCAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E235410" ref_strand="+" ref_description="SGN-E235410 [cLED-11-J16]">
      <seq>gacattgagcaaaatgtttgcattgagcgcattgcataatctaaatatgaatattatcacatattttagattccatatacgttgctatagaacctgagatatttatgaaaatgattacatgctctagtgattgagcagtcttgtcaattctaaaagttgtataggctccttatttgagttgtcatttcctaacatgtaatgaatgtttttctgcctttctatgagcgcttcagagtttgctaaaaaaggataaagaggagcaaaatgatcctacaattgcaagttttcatgagagactagccacagcttatcaagatccagcactgctgcatgtcggatattctggaaataatgcaagtatcattgccccccttcttggtactgctgaagttgatgcttagggtgtaatcgagttattgcttactgtaatcatgtaacacttttagttggcaaacatgtgggtatgtagtttgagttcaatctgctagtctgtataactccaactttttggttcagtactttggataactccactttctagttgacactgtattagatagtcaaaggtataactttttactgtcaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="-" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="90222" stop="89033"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="89922" g_stop="89337" g_length="586"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="586" r_length="586" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="587" polyA_stop="610"/>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="-" ref_id="SGN-E235410" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>586</cumulative_length_of_scored_exons>
        <coverage percentage="0.961" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E235410" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="89922" e_stop="89337"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACATTGAGCAAAATGTTTGCATTGAGCGCATTGCATAATCTAAATATGAATATTATCACATATTTTAGATTCCATATACGTTGCTATAGAACCTGAGATATTTATGAAAATGATTACATGCTCTAGTGATTGAGCAGTCTTGTCAATTCTAAAAGTTGTATAGGCTCCTTATTTGAGTTGTCATTTCCTAACATGTAATGAATGTTTTTCTGCCTTTCTATGAGCGCTTCAGAGTTTGCTAAAAAAGGATAAAGAGGAGCAAAATGATCCTACAATTGCAAGTTTTCATGAGAGACTAGCCACAGCTTATCAAGATCCAGCACTGCTGCATGTCGGATATTCTGGAAATAATGCAAGTATCATTGCCCCCCTTCTTGGTACTGCTGAAGTTGATGCTTAGGGTGTAATCGAGTTATTGCTTACTGTAATCATGTAACACTTTTAGTTGGCAAACATGTGGGTATGTAGTTTGAGTTCAATCTGCTAGTCTGTATAACTCCAACTTTTTGGTTCAGTACTTTGGATAACTCCACTTTCTAGTTGACACTGTATTAGATAGTCAAAGGTATAACTTTTTACTGTCAA</genome_strand>
        <mrna_strand>GACATTGAGCAAAATGTTTGCATTGAGCGCATTGCATAATCTAAATATGAATATTATCACATATTTTAGATTCCATATACGTTGCTATAGAACCTGAGATATTTATGAAAATGATTACATGCTCTAGTGATTGAGCAGTCTTGTCAATTCTAAAAGTTGTATAGGCTCCTTATTTGAGTTGTCATTTCCTAACATGTAATGAATGTTTTTCTGCCTTTCTATGAGCGCTTCAGAGTTTGCTAAAAAAGGATAAAGAGGAGCAAAATGATCCTACAATTGCAAGTTTTCATGAGAGACTAGCCACAGCTTATCAAGATCCAGCACTGCTGCATGTCGGATATTCTGGAAATAATGCAAGTATCATTGCCCCCCTTCTTGGTACTGCTGAAGTTGATGCTTAGGGTGTAATCGAGTTATTGCTTACTGTAATCATGTAACACTTTTAGTTGGCAAACATGTGGGTATGTAGTTTGAGTTCAATCTGCTAGTCTGTATAACTCCAACTTTTTGGTTCAGTACTTTGGATAACTCCACTTTCTAGTTGACACTGTATTAGATAGTCAAAGGTATAACTTTTTACTGTCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E376854" ref_strand="+" ref_description="SGN-E376854 [TUS-19-P5]">
      <seq>gacattgagcaaaatgtttgcattgagcgcattgcataatctaaatatgaatattatcacatattttagattccatatacgttgctatagaacctgagatatttatgaaaatgattacatgctctagtgattgagcagtcttgtcaattctaaaagttgtataggctccttatttgagttgtcatttcctaacatgtaatgaatgtttttctgcctttctatgagcgcttcagagtttgctaaaaaaggataaagaggagcaaaatgatcctacaattgcaagttttcatgagagactagccacagcttatcaagatccagcactgctgcatgtcggatattctggaaataatgcaagtatcattgccccccttcttggtactgctgaagttgatgcttagggtgtaatcgagttattgcttactgtaatcatgtaacacttttagttggcaaacatgtgggtatgtagtttgagttcaatctgctagtctgtataactccaactttttggttcagtactttggataactccactttctagttgacactgtattagatagtcaaaggtataactttttactgtcaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="-" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="90222" stop="89033"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="89922" g_stop="89337" g_length="586"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="586" r_length="586" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="587" polyA_stop="611"/>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="-" ref_id="SGN-E376854" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>586</cumulative_length_of_scored_exons>
        <coverage percentage="0.959" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E376854" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="89922" e_stop="89337"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACATTGAGCAAAATGTTTGCATTGAGCGCATTGCATAATCTAAATATGAATATTATCACATATTTTAGATTCCATATACGTTGCTATAGAACCTGAGATATTTATGAAAATGATTACATGCTCTAGTGATTGAGCAGTCTTGTCAATTCTAAAAGTTGTATAGGCTCCTTATTTGAGTTGTCATTTCCTAACATGTAATGAATGTTTTTCTGCCTTTCTATGAGCGCTTCAGAGTTTGCTAAAAAAGGATAAAGAGGAGCAAAATGATCCTACAATTGCAAGTTTTCATGAGAGACTAGCCACAGCTTATCAAGATCCAGCACTGCTGCATGTCGGATATTCTGGAAATAATGCAAGTATCATTGCCCCCCTTCTTGGTACTGCTGAAGTTGATGCTTAGGGTGTAATCGAGTTATTGCTTACTGTAATCATGTAACACTTTTAGTTGGCAAACATGTGGGTATGTAGTTTGAGTTCAATCTGCTAGTCTGTATAACTCCAACTTTTTGGTTCAGTACTTTGGATAACTCCACTTTCTAGTTGACACTGTATTAGATAGTCAAAGGTATAACTTTTTACTGTCAA</genome_strand>
        <mrna_strand>GACATTGAGCAAAATGTTTGCATTGAGCGCATTGCATAATCTAAATATGAATATTATCACATATTTTAGATTCCATATACGTTGCTATAGAACCTGAGATATTTATGAAAATGATTACATGCTCTAGTGATTGAGCAGTCTTGTCAATTCTAAAAGTTGTATAGGCTCCTTATTTGAGTTGTCATTTCCTAACATGTAATGAATGTTTTTCTGCCTTTCTATGAGCGCTTCAGAGTTTGCTAAAAAAGGATAAAGAGGAGCAAAATGATCCTACAATTGCAAGTTTTCATGAGAGACTAGCCACAGCTTATCAAGATCCAGCACTGCTGCATGTCGGATATTCTGGAAATAATGCAAGTATCATTGCCCCCCTTCTTGGTACTGCTGAAGTTGATGCTTAGGGTGTAATCGAGTTATTGCTTACTGTAATCATGTAACACTTTTAGTTGGCAAACATGTGGGTATGTAGTTTGAGTTCAATCTGCTAGTCTGTATAACTCCAACTTTTTGGTTCAGTACTTTGGATAACTCCACTTTCTAGTTGACACTGTATTAGATAGTCAAAGGTATAACTTTTTACTGTCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E376853" ref_strand="+" ref_description="SGN-E376853 [TUS-19-P5](-)">
      <seq>caaaatgtttgcattgagcgcattgcataatctaaatatgaatattatcacatattttagattccatatacgttgctatagaacctgagatatttatgaaaatgattacatgctctagtgattgagcagtcttgtcaattctaaaagttgtataggctccttatttgagttgtcatttcctaacatgtaatgaatgtttttctgcctttctatgagcgcttcagagtttgctaaaaaaggataaagaggagcaaaatgatcctacaattgcaagttttcatgagagactagccccagcttatcaagatccagcactgctgcatgtcggatattctggaaataatgcaagtatcattgccccccttcttggtactgctgaagttgatgcttagggtgtaatcgagttattgcttactgtaatcatgtaacacttttagttggcaaacatgtgggtatgtagtttgagttcaatctgctagtctgtataactccaactttttggttcagtactttggataactccactttctagttgaccctgtattagatagtcaaaggtataactttttactgtcaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="-" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="90213" stop="89033"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="89913" g_stop="89337" g_length="577"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="577" r_length="577" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="578" polyA_stop="600"/>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="-" ref_id="SGN-E376853" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>577</cumulative_length_of_scored_exons>
        <coverage percentage="0.962" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E376853" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="89913" e_stop="89337"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAATGTTTGCATTGAGCGCATTGCATAATCTAAATATGAATATTATCACATATTTTAGATTCCATATACGTTGCTATAGAACCTGAGATATTTATGAAAATGATTACATGCTCTAGTGATTGAGCAGTCTTGTCAATTCTAAAAGTTGTATAGGCTCCTTATTTGAGTTGTCATTTCCTAACATGTAATGAATGTTTTTCTGCCTTTCTATGAGCGCTTCAGAGTTTGCTAAAAAAGGATAAAGAGGAGCAAAATGATCCTACAATTGCAAGTTTTCATGAGAGACTAGCCACAGCTTATCAAGATCCAGCACTGCTGCATGTCGGATATTCTGGAAATAATGCAAGTATCATTGCCCCCCTTCTTGGTACTGCTGAAGTTGATGCTTAGGGTGTAATCGAGTTATTGCTTACTGTAATCATGTAACACTTTTAGTTGGCAAACATGTGGGTATGTAGTTTGAGTTCAATCTGCTAGTCTGTATAACTCCAACTTTTTGGTTCAGTACTTTGGATAACTCCACTTTCTAGTTGACACTGTATTAGATAGTCAAAGGTATAACTTTTTACTGTCAA</genome_strand>
        <mrna_strand>CAAAATGTTTGCATTGAGCGCATTGCATAATCTAAATATGAATATTATCACATATTTTAGATTCCATATACGTTGCTATAGAACCTGAGATATTTATGAAAATGATTACATGCTCTAGTGATTGAGCAGTCTTGTCAATTCTAAAAGTTGTATAGGCTCCTTATTTGAGTTGTCATTTCCTAACATGTAATGAATGTTTTTCTGCCTTTCTATGAGCGCTTCAGAGTTTGCTAAAAAAGGATAAAGAGGAGCAAAATGATCCTACAATTGCAAGTTTTCATGAGAGACTAGCCCCAGCTTATCAAGATCCAGCACTGCTGCATGTCGGATATTCTGGAAATAATGCAAGTATCATTGCCCCCCTTCTTGGTACTGCTGAAGTTGATGCTTAGGGTGTAATCGAGTTATTGCTTACTGTAATCATGTAACACTTTTAGTTGGCAAACATGTGGGTATGTAGTTTGAGTTCAATCTGCTAGTCTGTATAACTCCAACTTTTTGGTTCAGTACTTTGGATAACTCCACTTTCTAGTTGACCCTGTATTAGATAGTCAAAGGTATAACTTTTTACTGTCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E242036" ref_strand="+" ref_description="SGN-E242036 [cLED-27-H7]">
      <seq>gacattgagcaaaatgtttgcattgagcgcattgcataatctaaatatgaatattatcacatattttagattccatatacgttgctatagaacctgagatatttatgaaaatgattacatgctctagtgattgagcagtcttgtcaattctaaaagttgtataggctccttatttgagttgtcatttcctaacatgtaatgaatgtttttctgcctttctatgagcgcttcagagtttgctaaaaaaggataaagaggagcaaaatgatcctacaattgcaagttttcatgagagactagccacagcttatcaagatccagcactgctgcatgtcggatattctggaaataatgcaagtatcattgccccccttcttggtactgctgaagttgatgcttagggtgtaatcgagttattgcttactgtaatcatgtaacacttttagttggcaaacatgtgggtatgtagtttgagttcaatctgctagtctgtataactccaactttttggttcagtactttggataactccactttctagttgacactgtattagatagtcaaaggtataactttttact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="-" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="90222" stop="89042"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="89922" g_stop="89342" g_length="581"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="581" r_length="581" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="-" ref_id="SGN-E242036" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>581</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E242036" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="89922" e_stop="89342"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACATTGAGCAAAATGTTTGCATTGAGCGCATTGCATAATCTAAATATGAATATTATCACATATTTTAGATTCCATATACGTTGCTATAGAACCTGAGATATTTATGAAAATGATTACATGCTCTAGTGATTGAGCAGTCTTGTCAATTCTAAAAGTTGTATAGGCTCCTTATTTGAGTTGTCATTTCCTAACATGTAATGAATGTTTTTCTGCCTTTCTATGAGCGCTTCAGAGTTTGCTAAAAAAGGATAAAGAGGAGCAAAATGATCCTACAATTGCAAGTTTTCATGAGAGACTAGCCACAGCTTATCAAGATCCAGCACTGCTGCATGTCGGATATTCTGGAAATAATGCAAGTATCATTGCCCCCCTTCTTGGTACTGCTGAAGTTGATGCTTAGGGTGTAATCGAGTTATTGCTTACTGTAATCATGTAACACTTTTAGTTGGCAAACATGTGGGTATGTAGTTTGAGTTCAATCTGCTAGTCTGTATAACTCCAACTTTTTGGTTCAGTACTTTGGATAACTCCACTTTCTAGTTGACACTGTATTAGATAGTCAAAGGTATAACTTTTTACT</genome_strand>
        <mrna_strand>GACATTGAGCAAAATGTTTGCATTGAGCGCATTGCATAATCTAAATATGAATATTATCACATATTTTAGATTCCATATACGTTGCTATAGAACCTGAGATATTTATGAAAATGATTACATGCTCTAGTGATTGAGCAGTCTTGTCAATTCTAAAAGTTGTATAGGCTCCTTATTTGAGTTGTCATTTCCTAACATGTAATGAATGTTTTTCTGCCTTTCTATGAGCGCTTCAGAGTTTGCTAAAAAAGGATAAAGAGGAGCAAAATGATCCTACAATTGCAAGTTTTCATGAGAGACTAGCCACAGCTTATCAAGATCCAGCACTGCTGCATGTCGGATATTCTGGAAATAATGCAAGTATCATTGCCCCCCTTCTTGGTACTGCTGAAGTTGATGCTTAGGGTGTAATCGAGTTATTGCTTACTGTAATCATGTAACACTTTTAGTTGGCAAACATGTGGGTATGTAGTTTGAGTTCAATCTGCTAGTCTGTATAACTCCAACTTTTTGGTTCAGTACTTTGGATAACTCCACTTTCTAGTTGACACTGTATTAGATAGTCAAAGGTATAACTTTTTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E712486" ref_strand="+" ref_description="SGN-E712486 [FB05AA02]">
      <seq>acttcttccttgctcccctaattctgccattcctcttggtttactactgtctggggtatctcatctaccggaaccagctgctgaatgtatatgcacccaagtatgagactggtggaaagttgtggcctatagtacatgattctatgattttctccttgatactgatgcatgttatagccattggaatatttgggctaaagaaacttcctctcgcttcaagcttaacagttcctcttccaatccttactcttgtgttcaacagctattgtaggagacgcttcctacctatgttcaagtcttattcagtcgagagtttgctaaaaaaggataaagaggagcaaaatgatcctacaattgcaagttttcatgagagactagccacagcttatcaagatccagcactgctgcatgtcggatattctggaaataatgcaagtatcattgccccccttcttggtactgctgaagttgatgcttagggtgtaatcgagttattgcttactgtaatcatgtaacacttttagttggcaaacatgtgggtatgtagtttgagttcaatctgctagtctgtataactccaactttttggttcagtactttggataactccactttctagttgaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="-" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="91538" stop="89076"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91238" g_stop="91162" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="77" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91161" i_stop="90705" i_length="457">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.973" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="90704" g_stop="90471" g_length="234"/>
          <reference_exon_boundary r_type="cDNA" r_start="78" r_stop="311" r_length="234" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="90470" i_stop="89690" i_length="781">
            <donor d_prob="0.956" d_score="1.00"/>
            <acceptor a_prob="0.518" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="89689" g_stop="89369" g_length="321"/>
          <reference_exon_boundary r_type="cDNA" r_start="312" r_stop="632" r_length="321" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="-" ref_id="SGN-E712486" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>632</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E712486" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91238" e_stop="91162"/>
          <exon e_start="90704" e_stop="90471"/>
          <exon e_start="89689" e_stop="89369"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTTCTTCCTTGCTCCCCTAATTCTGCCATTCCTCTTGGTTTACTACTGTCTGGGGTATCTCATCTACCGGAACCAGGTTGGTTGCACATTTTTTACATTTTTCTTCTGCTTCCTTGGGATACATAAAAATGACGAATTCTACTTTGTGGTACCCTGCTAACGCAGGATTCTTTGTGCACGGGCTTCCCTTTTTATTTTTTCTTTTCTATTTTCTGGGAACTGGGAAGTATACAGCTGTTGAATTGATCAGTGAGGTTAAAGTAGGATCCTCACTTTTTTAAAAAAAATTGATATGATGATGACATGAATGAGGTTAAAGTGGAGACATATGATAAGTGAGGATTCATATTGCTGAATGTATTTGCTTGGGACTGAAGCATATTTGTTGACTTCTTGTTGATGTTGTCTTCTGACTCTTTTTCAAATTTGATAAATATTGGTTGTTATTTTTGGCTGTTGGAGAGATCCTAGTGAAATATCAAAATTCTGTTGGCTTGCTCTAGTTGGTCATGTTTTATTAATTTTTTGAGCAGCTGCTGAATGTATATGCACCCAAGTATGAGACTGGTGGAAAGTTGTGGCCTATAGTACATGATTCTATGATTTTCTCCTTGATACTGATGCATGTTATAGCCATTGGAATATTTGGGCTAAAGAAACTTCCTCTCGCTTCAAGCTTAACAGTTCCTCTTCCAATCCTTACTCTTGTGTTCAACAGCTATTGTAGGAGACGCTTCCTACCTATGTTCAAGTCTTATTCAGTCGAGGTACATCTGCCTTGTTCTTTACTTGTTTTGTAGCTCGTGGTTTATATAGCTGAACTCATAGAGTTCTCCTCTGCAGATCTTATTAGTCATTAATAAGCACCTAGTGCGGAAGTTGTTTCTTTTCTTTTAGCCATTGTTGATATGATAGTCCTTTTGGGGTTCTTGGAGAATTCAATTGACTTGGCAAACTTTTTGATTTGACAATTGCCCTATTTGGTAACTTTGTGAATCTGAACATAGCTCCCATGCAATTCTTGCAGAATATTGAGAAGCATTTAAACATACTATAAATAGAACTGCTAACCATCTGTTGTCTGGTCTCAGTAACATATATGCAGCAATTTAGAACACAGTTGCTGATAGCTGCACTTAATAAAGGGCGTTATATCTTGCATCCCGTGACTACATTGATGATGCATATTAGTGAACAGTCAAATGTACATTATTTAATGAATGTCTAAGTGACTTGATTGCTTATTTTAATGTAAGTCAAGGAGGATTACTGTGCTTGGCTAGCAAGTCATTGCAACTGTAACACTCGGATAGGTGACATTGAGCAAAATGTTTGCATTGAGCGCATTGCATAATCTAAATATGAATATTATCACATATTTTAGATTCCATATACGTTGCTATAGAACCTGAGATATTTATGAAAATGATTACATGCTCTAGTGATTGAGCAGTCTTGTCAATTCTAAAAGTTGTATAGGCTCCTTATTTGAGTTGTCATTTCCTAACATGTAATGAATGTTTTTCTGCCTTTCTATGAGCGCTTCAGAGTTTGCTAAAAAAGGATAAAGAGGAGCAAAATGATCCTACAATTGCAAGTTTTCATGAGAGACTAGCCACAGCTTATCAAGATCCAGCACTGCTGCATGTCGGATATTCTGGAAATAATGCAAGTATCATTGCCCCCCTTCTTGGTACTGCTGAAGTTGATGCTTAGGGTGTAATCGAGTTATTGCTTACTGTAATCATGTAACACTTTTAGTTGGCAAACATGTGGGTATGTAGTTTGAGTTCAATCTGCTAGTCTGTATAACTCCAACTTTTTGGTTCAGTACTTTGGATAACTCCACTTTCTAGTTGACACTGTATT</genome_strand>
        <mrna_strand>ACTTCTTCCTTGCTCCCCTAATTCTGCCATTCCTCTTGGTTTACTACTGTCTGGGGTATCTCATCTACCGGAACCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTGAATGTATATGCACCCAAGTATGAGACTGGTGGAAAGTTGTGGCCTATAGTACATGATTCTATGATTTTCTCCTTGATACTGATGCATGTTATAGCCATTGGAATATTTGGGCTAAAGAAACTTCCTCTCGCTTCAAGCTTAACAGTTCCTCTTCCAATCCTTACTCTTGTGTTCAACAGCTATTGTAGGAGACGCTTCCTACCTATGTTCAAGTCTTATTCAGTCGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTTGCTAAAAAAGGATAAAGAGGAGCAAAATGATCCTACAATTGCAAGTTTTCATGAGAGACTAGCCACAGCTTATCAAGATCCAGCACTGCTGCATGTCGGATATTCTGGAAATAATGCAAGTATCATTGCCCCCCTTCTTGGTACTGCTGAAGTTGATGCTTAGGGTGTAATCGAGTTATTGCTTACTGTAATCATGTAACACTTTTAGTTGGCAAACATGTGGGTATGTAGTTTGAGTTCAATCTGCTAGTCTGTATAACTCCAACTTTTTGGTTCAGTACTTTGGATAACTCCACTTTCTAGTTGAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E233199" ref_strand="+" ref_description="SGN-E233199 [cLED-6-D12]">
      <seq>gacattgagcaaaatgtttgcattgagcgcattgcataatctaaatatgaatattatcacatattttagattccatatacgttgctatagaacctgagatatttatgaaaatgattacatgctctagtgattgagcagtcttgtcaattctaaaagttgtataggctccttatttgagttgtcatttcctaacatgtaatgaatgtttttctgcctttctatgagcgcttcagagtttgctaaaaaaggataaagaggagcaaaatgatcctacaattgcaagttttcatgagagactagccacagcttatcaagatccagcactgctgcatgtcggatattctggaaataatgcaagtatcattgccccccttcttggtactgctgaagttgatgcttanggtgtaatcgagttattgcttactgtaatcatgtaacacttttagttggcaaacatgtgggtatgtagtttgagttcaatctgctagtctgtataactccaactttttggttcagtactttggataac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="-" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="90222" stop="89094"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="89922" g_stop="89394" g_length="529"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="529" r_length="529" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="-" ref_id="SGN-E233199" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>529</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E233199" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="89922" e_stop="89394"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACATTGAGCAAAATGTTTGCATTGAGCGCATTGCATAATCTAAATATGAATATTATCACATATTTTAGATTCCATATACGTTGCTATAGAACCTGAGATATTTATGAAAATGATTACATGCTCTAGTGATTGAGCAGTCTTGTCAATTCTAAAAGTTGTATAGGCTCCTTATTTGAGTTGTCATTTCCTAACATGTAATGAATGTTTTTCTGCCTTTCTATGAGCGCTTCAGAGTTTGCTAAAAAAGGATAAAGAGGAGCAAAATGATCCTACAATTGCAAGTTTTCATGAGAGACTAGCCACAGCTTATCAAGATCCAGCACTGCTGCATGTCGGATATTCTGGAAATAATGCAAGTATCATTGCCCCCCTTCTTGGTACTGCTGAAGTTGATGCTTAGGGTGTAATCGAGTTATTGCTTACTGTAATCATGTAACACTTTTAGTTGGCAAACATGTGGGTATGTAGTTTGAGTTCAATCTGCTAGTCTGTATAACTCCAACTTTTTGGTTCAGTACTTTGGATAAC</genome_strand>
        <mrna_strand>GACATTGAGCAAAATGTTTGCATTGAGCGCATTGCATAATCTAAATATGAATATTATCACATATTTTAGATTCCATATACGTTGCTATAGAACCTGAGATATTTATGAAAATGATTACATGCTCTAGTGATTGAGCAGTCTTGTCAATTCTAAAAGTTGTATAGGCTCCTTATTTGAGTTGTCATTTCCTAACATGTAATGAATGTTTTTCTGCCTTTCTATGAGCGCTTCAGAGTTTGCTAAAAAAGGATAAAGAGGAGCAAAATGATCCTACAATTGCAAGTTTTCATGAGAGACTAGCCACAGCTTATCAAGATCCAGCACTGCTGCATGTCGGATATTCTGGAAATAATGCAAGTATCATTGCCCCCCTTCTTGGTACTGCTGAAGTTGATGCTTANGGTGTAATCGAGTTATTGCTTACTGTAATCATGTAACACTTTTAGTTGGCAAACATGTGGGTATGTAGTTTGAGTTCAATCTGCTAGTCTGTATAACTCCAACTTTTTGGTTCAGTACTTTGGATAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E353847" ref_strand="+" ref_description="SGN-E353847 [cTOS-10-P23]">
      <seq>tcgacgctcgttttcattttataaagagaaatatttgtaggaaatatgatgatgagtttgaggtcccttcagttccttaccacagtgaaattcccaggattcttttgtttggcctccttggtataacatacttcttccttgctcccctaattctgccattcctcttggtttactactgtctggggtatctcatctaccggaaccagctattgtaggagacgcttcctacctatgttcaagtcttattcagtcgagagtttgctaaaaaaggataaagaggagcaaaatgatcctacaattgcaagttttcatgagagactagccacagcttatcaagatccagcactgctgcatgtcggatattctggaaataatgcaagtatcattgccccccttcttggtactgctgaagttgatgcttagggtgtaatcgagttattgcttactgtaatcatgtaacacttttagttggcaaacatgtgggtatgtagtttgagttcaatctgctaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="-" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="91668" stop="89136"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91368" g_stop="91162" g_length="207"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="206" r_length="206" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91161" i_stop="90520" i_length="642">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.470" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="90519" g_stop="90471" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="207" r_stop="255" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="90470" i_stop="89690" i_length="781">
            <donor d_prob="0.956" d_score="1.00"/>
            <acceptor a_prob="0.518" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="89689" g_stop="89425" g_length="265"/>
          <reference_exon_boundary r_type="cDNA" r_start="256" r_stop="520" r_length="265" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="-" ref_id="SGN-E353847" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>521</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E353847" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91368" e_stop="91162"/>
          <exon e_start="90519" e_stop="90471"/>
          <exon e_start="89689" e_stop="89425"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGACGCTCGTTTTCAATTTTATAAAGAGAAATATTTGTAGGAAATATGATGATGAGTTTGAGGTCCCTTCAGTTCCTTACCACAGTGAAATTCCCAGGATTCTTTTGTTTGGCCTCCTTGGTATAACATACTTCTTCCTTGCTCCCCTAATTCTGCCATTCCTCTTGGTTTACTACTGTCTGGGGTATCTCATCTACCGGAACCAGGTTGGTTGCACATTTTTTACATTTTTCTTCTGCTTCCTTGGGATACATAAAAATGACGAATTCTACTTTGTGGTACCCTGCTAACGCAGGATTCTTTGTGCACGGGCTTCCCTTTTTATTTTTTCTTTTCTATTTTCTGGGAACTGGGAAGTATACAGCTGTTGAATTGATCAGTGAGGTTAAAGTAGGATCCTCACTTTTTTAAAAAAAATTGATATGATGATGACATGAATGAGGTTAAAGTGGAGACATATGATAAGTGAGGATTCATATTGCTGAATGTATTTGCTTGGGACTGAAGCATATTTGTTGACTTCTTGTTGATGTTGTCTTCTGACTCTTTTTCAAATTTGATAAATATTGGTTGTTATTTTTGGCTGTTGGAGAGATCCTAGTGAAATATCAAAATTCTGTTGGCTTGCTCTAGTTGGTCATGTTTTATTAATTTTTTGAGCAGCTGCTGAATGTATATGCACCCAAGTATGAGACTGGTGGAAAGTTGTGGCCTATAGTACATGATTCTATGATTTTCTCCTTGATACTGATGCATGTTATAGCCATTGGAATATTTGGGCTAAAGAAACTTCCTCTCGCTTCAAGCTTAACAGTTCCTCTTCCAATCCTTACTCTTGTGTTCAACAGCTATTGTAGGAGACGCTTCCTACCTATGTTCAAGTCTTATTCAGTCGAGGTACATCTGCCTTGTTCTTTACTTGTTTTGTAGCTCGTGGTTTATATAGCTGAACTCATAGAGTTCTCCTCTGCAGATCTTATTAGTCATTAATAAGCACCTAGTGCGGAAGTTGTTTCTTTTCTTTTAGCCATTGTTGATATGATAGTCCTTTTGGGGTTCTTGGAGAATTCAATTGACTTGGCAAACTTTTTGATTTGACAATTGCCCTATTTGGTAACTTTGTGAATCTGAACATAGCTCCCATGCAATTCTTGCAGAATATTGAGAAGCATTTAAACATACTATAAATAGAACTGCTAACCATCTGTTGTCTGGTCTCAGTAACATATATGCAGCAATTTAGAACACAGTTGCTGATAGCTGCACTTAATAAAGGGCGTTATATCTTGCATCCCGTGACTACATTGATGATGCATATTAGTGAACAGTCAAATGTACATTATTTAATGAATGTCTAAGTGACTTGATTGCTTATTTTAATGTAAGTCAAGGAGGATTACTGTGCTTGGCTAGCAAGTCATTGCAACTGTAACACTCGGATAGGTGACATTGAGCAAAATGTTTGCATTGAGCGCATTGCATAATCTAAATATGAATATTATCACATATTTTAGATTCCATATACGTTGCTATAGAACCTGAGATATTTATGAAAATGATTACATGCTCTAGTGATTGAGCAGTCTTGTCAATTCTAAAAGTTGTATAGGCTCCTTATTTGAGTTGTCATTTCCTAACATGTAATGAATGTTTTTCTGCCTTTCTATGAGCGCTTCAGAGTTTGCTAAAAAAGGATAAAGAGGAGCAAAATGATCCTACAATTGCAAGTTTTCATGAGAGACTAGCCACAGCTTATCAAGATCCAGCACTGCTGCATGTCGGATATTCTGGAAATAATGCAAGTATCATTGCCCCCCTTCTTGGTACTGCTGAAGTTGATGCTTAGGGTGTAATCGAGTTATTGCTTACTGTAATCATGTAACACTTTTAGTTGGCAAACATGTGGGTATGTAGTTTGAGTTCAATCTGCTAGTCTGTATAAC</genome_strand>
        <mrna_strand>TCGACGCTCGTTTTC-ATTTTATAAAGAGAAATATTTGTAGGAAATATGATGATGAGTTTGAGGTCCCTTCAGTTCCTTACCACAGTGAAATTCCCAGGATTCTTTTGTTTGGCCTCCTTGGTATAACATACTTCTTCCTTGCTCCCCTAATTCTGCCATTCCTCTTGGTTTACTACTGTCTGGGGTATCTCATCTACCGGAACCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATTGTAGGAGACGCTTCCTACCTATGTTCAAGTCTTATTCAGTCGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTTGCTAAAAAAGGATAAAGAGGAGCAAAATGATCCTACAATTGCAAGTTTTCATGAGAGACTAGCCACAGCTTATCAAGATCCAGCACTGCTGCATGTCGGATATTCTGGAAATAATGCAAGTATCATTGCCCCCCTTCTTGGTACTGCTGAAGTTGATGCTTAGGGTGTAATCGAGTTATTGCTTACTGTAATCATGTAACACTTTTAGTTGGCAAACATGTGGGTATGTAGTTTGAGTTCAATCTGCTAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E244776" ref_strand="+" ref_description="SGN-E244776 [cLED-38-F10]">
      <seq>gacattgagcaaaatgtttgcattgagcgcattgcataatctaaatatgaatattatcacatattttagattccatatacgttgctatagaacctgagatatttatgaaaatgattacatgctctagtgattgagcagtcttgtcaattctaaaagttgtataggctccttatttgagttgtcatttcctaacatgtaatgaatgtttttctgcctttctatgagcgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="-" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="90222" stop="89395"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="89922" g_stop="89695" g_length="228"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="228" r_length="228" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="-" ref_id="SGN-E244776" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>228</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E244776" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="89922" e_stop="89695"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACATTGAGCAAAATGTTTGCATTGAGCGCATTGCATAATCTAAATATGAATATTATCACATATTTTAGATTCCATATACGTTGCTATAGAACCTGAGATATTTATGAAAATGATTACATGCTCTAGTGATTGAGCAGTCTTGTCAATTCTAAAAGTTGTATAGGCTCCTTATTTGAGTTGTCATTTCCTAACATGTAATGAATGTTTTTCTGCCTTTCTATGAGCGC</genome_strand>
        <mrna_strand>GACATTGAGCAAAATGTTTGCATTGAGCGCATTGCATAATCTAAATATGAATATTATCACATATTTTAGATTCCATATACGTTGCTATAGAACCTGAGATATTTATGAAAATGATTACATGCTCTAGTGATTGAGCAGTCTTGTCAATTCTAAAAGTTGTATAGGCTCCTTATTTGAGTTGTCATTTCCTAACATGTAATGAATGTTTTTCTGCCTTTCTATGAGCGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E548448" ref_strand="+" ref_description="SGN-E548448 [TUS-61-E18]">
      <seq>ttacagtgctatttcttatacccgttttaatagtccaagggcttacacatcttgagcagttggaaatctggtttccctttttgaaaggattgcttagaatagcatttgttagccaagtgattaccggatatcttcctagtcttgtacttcaactgtttctctatgttgtgccatccataatgattatgttctcatccatacaaggatacattgctatgagccagatagagaaaagtgcatgcatcaaagttctttggtttactatatggaacattttttttgcaaatgtgctctctggatcggctctctatcgagttgaaatttttcttgagcccaaaaatattcctgccatattagctgtagcagttccaggacaggcaactttctttatcgcctatgtggttacatctggatggaccagcacttcctcagaactttttcagctgtcgacgctcgttttcaattttataaagagaaatatttgtaggaaatatgatgatgagtttgaggtcccttcagttccttaccacagtgaaattcccaggattcttttgtttggcctccttggtataacatacttcttccttgctcccctaattctgccattcctcttggtttactactgtctggggtatctcatctaccggaaccagctgctgaatgtatatgcacccaagtatgagactggtggaaagttgtggcctatagtacatgattctatgattttctccttgatactgatgcatgttatagccattggaatatttgggctaaagaaacttcctctcgcttcagcttaacagttcctcttccatcctta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="-" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="93211" stop="90236"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92911" g_stop="92812" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="100" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92811" i_stop="92708" i_length="104">
            <donor d_prob="0.415" d_score="1.00"/>
            <acceptor a_prob="0.935" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92707" g_stop="92431" g_length="277"/>
          <reference_exon_boundary r_type="cDNA" r_start="101" r_stop="377" r_length="277" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="92430" i_stop="91438" i_length="993">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91437" g_stop="91162" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="378" r_stop="653" r_length="276" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="91161" i_stop="90705" i_length="457">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.973" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="90704" g_stop="90536" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="654" r_stop="820" r_length="167" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="-" ref_id="SGN-E548448" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>822</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E548448" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92911" e_stop="92812"/>
          <exon e_start="92707" e_stop="92431"/>
          <exon e_start="91437" e_stop="91162"/>
          <exon e_start="90704" e_stop="90536"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTACAGTGCTATTTCTTATACCCGTTTTAATAGTCCAAGGGCTTACACATCTTGAGCAGTTGGAAATCTGGTTTCCCTTTTTGAAAGGATTGCTTAGAATGTAAGTGGTAACTGAAAACTTTGGGAAGTTTCAGCTTAATGAGCATGTTACTATACTTTCTGATGTCTTTGCATGGTGGTAAAATAAGTTAATGTGCCTTGCAGAGCATTTGTTAGCCAAGTGATTACCGGATATCTTCCTAGTCTTGTACTTCAACTGTTTCTCTATGTTGTGCCATCCATAATGATTATGTTCTCATCCATACAAGGATACATTGCTATGAGCCAGATAGAGAAAAGTGCATGCATCAAAGTTCTTTGGTTTACTATATGGAACATTTTTTTTGCAAATGTGCTCTCTGGATCGGCTCTCTATCGAGTTGAAATTTTTCTTGAGCCCAAAAATATTCCTGCCATATTAGCTGTAGCAGTTCCAGGACAGGTGAGCGTGGTTCAGTTATCATTATGGCAATCATCTTCTTGAAATAGAAGAAGTTTGATCCTTAAATGTGTTTTAGAAGGTTTATACAATATCAACTGTAGCTTAATCTATTGTTTTTGGATAAATTGTTATCAATGTTTGACGGATAAATAAAAAGGAGAATTTTGGGACACAACAAGCTACATTTGCAAGAAAACATGATGAAGAAGTGATTTCATTGCTTATTTTCTCAATTAAGACAACCACGTAATTGCTTTTTGCAAATATCTTTGCAGCACAGACTAGGGTACATTGGCCACCATATCTATTTTCTTGCAATATATAATGTTAAGTCTAATTTTGATTAGGATGCTAAGTAAGAGGGTAGAGTTAACCATTTGATTTTTGGACTATAACTGAAATAATCTTGACCACAGTTTACAGAACACTTGGGGTTAGTGGTGATCTCTGCAGCTGATGTTACAGAAGGATAATTTAGCTAAGACGAGAAATGGTAAAATGATATTTGAAGACTAAAGTGAATAGGTGCTCCACTCTTGTGGAATATTCTTGCAAAAATCTCTCTTAAGTGAACTTTTATTTTAAGCATTTTCCTACCGAACTCACGAGAAAGTTCCTTTTTTATTGTGATAAATGGTTACTATTAAGAACTAAACATGTTGGTAGGATAGCTAATGTTACCTCTTTTAGCATTTTGCATGGATATGTCTATGGCTTTGACTTCGTAAAAAAAAAAAGATCGACGGCTTTATGTGATTAGTTGAGTCACTAGAATCATTTGATGTTTTCAAATGAAATATTGTAGAATGCAACCGGAAGGCAGAGATCTATGACATCTAATTTTATGTGGAATATGGATCTGATATGCCTGTTTAAGTACTGTTTGTTATACTAAATAACACTAATGAGAAAAGTTCAAATGTTTGATTGATACGTACTTATTGAATAATCAACAGTTACTACTAGAGAACTGAGTTCCTATTCGTCTTGCAGGCAACTTTCTTTATCGCCTATGTGGTTACATCTGGATGGACCAGCACTTCCTCAGAACTTTTTCAGCTGTCGACGCTCGTTTTCAATTTTATAAAGAGAAATATTTGTAGGAAATATGATGATGAGTTTGAGGTCCCTTCAGTTCCTTACCACAGTGAAATTCCCAGGATTCTTTTGTTTGGCCTCCTTGGTATAACATACTTCTTCCTTGCTCCCCTAATTCTGCCATTCCTCTTGGTTTACTACTGTCTGGGGTATCTCATCTACCGGAACCAGGTTGGTTGCACATTTTTTACATTTTTCTTCTGCTTCCTTGGGATACATAAAAATGACGAATTCTACTTTGTGGTACCCTGCTAACGCAGGATTCTTTGTGCACGGGCTTCCCTTTTTATTTTTTCTTTTCTATTTTCTGGGAACTGGGAAGTATACAGCTGTTGAATTGATCAGTGAGGTTAAAGTAGGATCCTCACTTTTTTAAAAAAAATTGATATGATGATGACATGAATGAGGTTAAAGTGGAGACATATGATAAGTGAGGATTCATATTGCTGAATGTATTTGCTTGGGACTGAAGCATATTTGTTGACTTCTTGTTGATGTTGTCTTCTGACTCTTTTTCAAATTTGATAAATATTGGTTGTTATTTTTGGCTGTTGGAGAGATCCTAGTGAAATATCAAAATTCTGTTGGCTTGCTCTAGTTGGTCATGTTTTATTAATTTTTTGAGCAGCTGCTGAATGTATATGCACCCAAGTATGAGACTGGTGGAAAGTTGTGGCCTATAGTACATGATTCTATGATTTTCTCCTTGATACTGATGCATGTTATAGCCATTGGAATATTTGGGCTAAAGAAACTTCCTCTCGCTTCAAGCTTAACAGTTCCTCTTCCAATCCTTA</genome_strand>
        <mrna_strand>TTACAGTGCTATTTCTTATACCCGTTTTAATAGTCCAAGGGCTTACACATCTTGAGCAGTTGGAAATCTGGTTTCCCTTTTTGAAAGGATTGCTTAGAAT........................................................................................................AGCATTTGTTAGCCAAGTGATTACCGGATATCTTCCTAGTCTTGTACTTCAACTGTTTCTCTATGTTGTGCCATCCATAATGATTATGTTCTCATCCATACAAGGATACATTGCTATGAGCCAGATAGAGAAAAGTGCATGCATCAAAGTTCTTTGGTTTACTATATGGAACATTTTTTTTGCAAATGTGCTCTCTGGATCGGCTCTCTATCGAGTTGAAATTTTTCTTGAGCCCAAAAATATTCCTGCCATATTAGCTGTAGCAGTTCCAGGACAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACTTTCTTTATCGCCTATGTGGTTACATCTGGATGGACCAGCACTTCCTCAGAACTTTTTCAGCTGTCGACGCTCGTTTTCAATTTTATAAAGAGAAATATTTGTAGGAAATATGATGATGAGTTTGAGGTCCCTTCAGTTCCTTACCACAGTGAAATTCCCAGGATTCTTTTGTTTGGCCTCCTTGGTATAACATACTTCTTCCTTGCTCCCCTAATTCTGCCATTCCTCTTGGTTTACTACTGTCTGGGGTATCTCATCTACCGGAACCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTGAATGTATATGCACCCAAGTATGAGACTGGTGGAAAGTTGTGGCCTATAGTACATGATTCTATGATTTTCTCCTTGATACTGATGCATGTTATAGCCATTGGAATATTTGGGCTAAAGAAACTTCCTCTCGCTTC-AGCTTAACAGTTCCTCTTCC-ATCCTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E305335" ref_strand="+" ref_description="SGN-E305335 [cLEX-15-B10]">
      <seq>tgcctttgtatctttccggacacgttttgccgcagcttcagctacacacatgcagcaaggtgtaaatcctacacaatgggtcactgagccagctcctgatccagaggatgtgtattggcctttcttttcagcatcatttctaaagagatggattagcaacctggtggttgttgtggcatgcgtcctccttacagtgctatttcttatacccgttttaatagtccaagggcttacacatcttgagcagttggaaatctggtttccctttttgaaaggattgcttagaatgcaactttctttatcgcctatgtggttacatctggatggaccagcacttcctcagaactttttcagctgtcgacgctcgttttcaattttataaagagaaatatttgtaggaaatatgatgatgagtttgaggtcccttcagttccttaccacagtgaaattcccaggattcttttgtttggcctccttggtataacatacttcttccttgctcccctaattctgccattcctcttggtttactactgtctggggtatctcatctaccggaaccaggttggttgcacattttttacatttttcttctgcttccttgggatacataaaaatgacgaattctact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="-" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="93399" stop="90795"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93099" g_stop="92812" g_length="288"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="288" r_length="288" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92811" i_stop="91438" i_length="1374">
            <donor d_prob="0.415" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91437" g_stop="91095" g_length="343"/>
          <reference_exon_boundary r_type="cDNA" r_start="289" r_stop="631" r_length="343" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="-" ref_id="SGN-E305335" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>631</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E305335" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93099" e_stop="92812"/>
          <exon e_start="91437" e_stop="91095"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCCTTTGTATCTTTCCGGACACGTTTTGCCGCAGCTTCAGCTACACACATGCAGCAAGGTGTAAATCCTACACAATGGGTCACTGAGCCAGCTCCTGATCCAGAGGATGTGTATTGGCCTTTCTTTTCAGCATCATTTCTAAAGAGATGGATTAGCAACCTGGTGGTTGTTGTGGCATGCGTCCTCCTTACAGTGCTATTTCTTATACCCGTTTTAATAGTCCAAGGGCTTACACATCTTGAGCAGTTGGAAATCTGGTTTCCCTTTTTGAAAGGATTGCTTAGAATGTAAGTGGTAACTGAAAACTTTGGGAAGTTTCAGCTTAATGAGCATGTTACTATACTTTCTGATGTCTTTGCATGGTGGTAAAATAAGTTAATGTGCCTTGCAGAGCATTTGTTAGCCAAGTGATTACCGGATATCTTCCTAGTCTTGTACTTCAACTGTTTCTCTATGTTGTGCCATCCATAATGATTATGTTCTCATCCATACAAGGATACATTGCTATGAGCCAGATAGAGAAAAGTGCATGCATCAAAGTTCTTTGGTTTACTATATGGAACATTTTTTTTGCAAATGTGCTCTCTGGATCGGCTCTCTATCGAGTTGAAATTTTTCTTGAGCCCAAAAATATTCCTGCCATATTAGCTGTAGCAGTTCCAGGACAGGTGAGCGTGGTTCAGTTATCATTATGGCAATCATCTTCTTGAAATAGAAGAAGTTTGATCCTTAAATGTGTTTTAGAAGGTTTATACAATATCAACTGTAGCTTAATCTATTGTTTTTGGATAAATTGTTATCAATGTTTGACGGATAAATAAAAAGGAGAATTTTGGGACACAACAAGCTACATTTGCAAGAAAACATGATGAAGAAGTGATTTCATTGCTTATTTTCTCAATTAAGACAACCACGTAATTGCTTTTTGCAAATATCTTTGCAGCACAGACTAGGGTACATTGGCCACCATATCTATTTTCTTGCAATATATAATGTTAAGTCTAATTTTGATTAGGATGCTAAGTAAGAGGGTAGAGTTAACCATTTGATTTTTGGACTATAACTGAAATAATCTTGACCACAGTTTACAGAACACTTGGGGTTAGTGGTGATCTCTGCAGCTGATGTTACAGAAGGATAATTTAGCTAAGACGAGAAATGGTAAAATGATATTTGAAGACTAAAGTGAATAGGTGCTCCACTCTTGTGGAATATTCTTGCAAAAATCTCTCTTAAGTGAACTTTTATTTTAAGCATTTTCCTACCGAACTCACGAGAAAGTTCCTTTTTTATTGTGATAAATGGTTACTATTAAGAACTAAACATGTTGGTAGGATAGCTAATGTTACCTCTTTTAGCATTTTGCATGGATATGTCTATGGCTTTGACTTCGTAAAAAAAAAAAGATCGACGGCTTTATGTGATTAGTTGAGTCACTAGAATCATTTGATGTTTTCAAATGAAATATTGTAGAATGCAACCGGAAGGCAGAGATCTATGACATCTAATTTTATGTGGAATATGGATCTGATATGCCTGTTTAAGTACTGTTTGTTATACTAAATAACACTAATGAGAAAAGTTCAAATGTTTGATTGATACGTACTTATTGAATAATCAACAGTTACTACTAGAGAACTGAGTTCCTATTCGTCTTGCAGGCAACTTTCTTTATCGCCTATGTGGTTACATCTGGATGGACCAGCACTTCCTCAGAACTTTTTCAGCTGTCGACGCTCGTTTTCAATTTTATAAAGAGAAATATTTGTAGGAAATATGATGATGAGTTTGAGGTCCCTTCAGTTCCTTACCACAGTGAAATTCCCAGGATTCTTTTGTTTGGCCTCCTTGGTATAACATACTTCTTCCTTGCTCCCCTAATTCTGCCATTCCTCTTGGTTTACTACTGTCTGGGGTATCTCATCTACCGGAACCAGGTTGGTTGCACATTTTTTACATTTTTCTTCTGCTTCCTTGGGATACATAAAAATGACGAATTCTACT</genome_strand>
        <mrna_strand>TGCCTTTGTATCTTTCCGGACACGTTTTGCCGCAGCTTCAGCTACACACATGCAGCAAGGTGTAAATCCTACACAATGGGTCACTGAGCCAGCTCCTGATCCAGAGGATGTGTATTGGCCTTTCTTTTCAGCATCATTTCTAAAGAGATGGATTAGCAACCTGGTGGTTGTTGTGGCATGCGTCCTCCTTACAGTGCTATTTCTTATACCCGTTTTAATAGTCCAAGGGCTTACACATCTTGAGCAGTTGGAAATCTGGTTTCCCTTTTTGAAAGGATTGCTTAGAAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACTTTCTTTATCGCCTATGTGGTTACATCTGGATGGACCAGCACTTCCTCAGAACTTTTTCAGCTGTCGACGCTCGTTTTCAATTTTATAAAGAGAAATATTTGTAGGAAATATGATGATGAGTTTGAGGTCCCTTCAGTTCCTTACCACAGTGAAATTCCCAGGATTCTTTTGTTTGGCCTCCTTGGTATAACATACTTCTTCCTTGCTCCCCTAATTCTGCCATTCCTCTTGGTTTACTACTGTCTGGGGTATCTCATCTACCGGAACCAGGTTGGTTGCACATTTTTTACATTTTTCTTCTGCTTCCTTGGGATACATAAAAATGACGAATTCTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E301505" ref_strand="+" ref_description="SGN-E301505 [cLEW-23-M19]">
      <seq>tatacccgttttaatagtccaagggcttacacatcttgagcagttggaaatctggtttccctttttgaaaggattgcttagaatgcaactttctttatcgcctatgtggttacatctggatggaccagcacttcctcagaactttttcagctgtcgacgctcgttttcaattttataaagagaaatatttgtaggaaatatgatgatgagtttgaggtcccttcagttccttaccacagtgaaattcccaggattcttttgtttggcctccttggtataacatacttcttccttgctcccctaattctgccattcctcttggtttactactgtct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="-" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="93195" stop="90887"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92895" g_stop="92812" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="84" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92811" i_stop="91438" i_length="1374">
            <donor d_prob="0.415" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91437" g_stop="91187" g_length="251"/>
          <reference_exon_boundary r_type="cDNA" r_start="85" r_stop="335" r_length="251" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="-" ref_id="SGN-E301505" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>335</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E301505" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92895" e_stop="92812"/>
          <exon e_start="91437" e_stop="91187"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATACCCGTTTTAATAGTCCAAGGGCTTACACATCTTGAGCAGTTGGAAATCTGGTTTCCCTTTTTGAAAGGATTGCTTAGAATGTAAGTGGTAACTGAAAACTTTGGGAAGTTTCAGCTTAATGAGCATGTTACTATACTTTCTGATGTCTTTGCATGGTGGTAAAATAAGTTAATGTGCCTTGCAGAGCATTTGTTAGCCAAGTGATTACCGGATATCTTCCTAGTCTTGTACTTCAACTGTTTCTCTATGTTGTGCCATCCATAATGATTATGTTCTCATCCATACAAGGATACATTGCTATGAGCCAGATAGAGAAAAGTGCATGCATCAAAGTTCTTTGGTTTACTATATGGAACATTTTTTTTGCAAATGTGCTCTCTGGATCGGCTCTCTATCGAGTTGAAATTTTTCTTGAGCCCAAAAATATTCCTGCCATATTAGCTGTAGCAGTTCCAGGACAGGTGAGCGTGGTTCAGTTATCATTATGGCAATCATCTTCTTGAAATAGAAGAAGTTTGATCCTTAAATGTGTTTTAGAAGGTTTATACAATATCAACTGTAGCTTAATCTATTGTTTTTGGATAAATTGTTATCAATGTTTGACGGATAAATAAAAAGGAGAATTTTGGGACACAACAAGCTACATTTGCAAGAAAACATGATGAAGAAGTGATTTCATTGCTTATTTTCTCAATTAAGACAACCACGTAATTGCTTTTTGCAAATATCTTTGCAGCACAGACTAGGGTACATTGGCCACCATATCTATTTTCTTGCAATATATAATGTTAAGTCTAATTTTGATTAGGATGCTAAGTAAGAGGGTAGAGTTAACCATTTGATTTTTGGACTATAACTGAAATAATCTTGACCACAGTTTACAGAACACTTGGGGTTAGTGGTGATCTCTGCAGCTGATGTTACAGAAGGATAATTTAGCTAAGACGAGAAATGGTAAAATGATATTTGAAGACTAAAGTGAATAGGTGCTCCACTCTTGTGGAATATTCTTGCAAAAATCTCTCTTAAGTGAACTTTTATTTTAAGCATTTTCCTACCGAACTCACGAGAAAGTTCCTTTTTTATTGTGATAAATGGTTACTATTAAGAACTAAACATGTTGGTAGGATAGCTAATGTTACCTCTTTTAGCATTTTGCATGGATATGTCTATGGCTTTGACTTCGTAAAAAAAAAAAGATCGACGGCTTTATGTGATTAGTTGAGTCACTAGAATCATTTGATGTTTTCAAATGAAATATTGTAGAATGCAACCGGAAGGCAGAGATCTATGACATCTAATTTTATGTGGAATATGGATCTGATATGCCTGTTTAAGTACTGTTTGTTATACTAAATAACACTAATGAGAAAAGTTCAAATGTTTGATTGATACGTACTTATTGAATAATCAACAGTTACTACTAGAGAACTGAGTTCCTATTCGTCTTGCAGGCAACTTTCTTTATCGCCTATGTGGTTACATCTGGATGGACCAGCACTTCCTCAGAACTTTTTCAGCTGTCGACGCTCGTTTTCAATTTTATAAAGAGAAATATTTGTAGGAAATATGATGATGAGTTTGAGGTCCCTTCAGTTCCTTACCACAGTGAAATTCCCAGGATTCTTTTGTTTGGCCTCCTTGGTATAACATACTTCTTCCTTGCTCCCCTAATTCTGCCATTCCTCTTGGTTTACTACTGTCT</genome_strand>
        <mrna_strand>TATACCCGTTTTAATAGTCCAAGGGCTTACACATCTTGAGCAGTTGGAAATCTGGTTTCCCTTTTTGAAAGGATTGCTTAGAAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACTTTCTTTATCGCCTATGTGGTTACATCTGGATGGACCAGCACTTCCTCAGAACTTTTTCAGCTGTCGACGCTCGTTTTCAATTTTATAAAGAGAAATATTTGTAGGAAATATGATGATGAGTTTGAGGTCCCTTCAGTTCCTTACCACAGTGAAATTCCCAGGATTCTTTTGTTTGGCCTCCTTGGTATAACATACTTCTTCCTTGCTCCCCTAATTCTGCCATTCCTCTTGGTTTACTACTGTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E291026" ref_strand="+" ref_description="SGN-E291026 [cLET-8-N12]">
      <seq>tacagtgctatttcttatacccgttttaatagtccaagggcttacacatcttgagcagttggaaatctggtttccctttttgaaaggattgcttagaatagcatttgttagccaagtgattaccggatatcttcctagtcttgtacttcaactgtttctctatgttgtgccatccataatgattatgttctcatccatacaaggatacattgctatgagccagatagagaaaagtgcatgcatcaaagttctttggtttactatatggaacattttttttgcaaatgtgctctctggatcggctctctatcgagttgaaatttttcttgagcccaaaaatattcctgccatattagctgtagcagttccaggacaggcaactttctttatcgcctatgtggttacatctggatggaccagcacttcctcagaactttttcagctgtcgacgctcgttttcaattttataaagagaaatatttgtaggaaatatgatgatgagtttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="-" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="93210" stop="91008"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92910" g_stop="92812" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="99" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92811" i_stop="92708" i_length="104">
            <donor d_prob="0.415" d_score="1.00"/>
            <acceptor a_prob="0.935" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92707" g_stop="92431" g_length="277"/>
          <reference_exon_boundary r_type="cDNA" r_start="100" r_stop="376" r_length="277" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="92430" i_stop="91438" i_length="993">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91437" g_stop="91308" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="377" r_stop="506" r_length="130" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="-" ref_id="SGN-E291026" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>506</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E291026" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92910" e_stop="92812"/>
          <exon e_start="92707" e_stop="92431"/>
          <exon e_start="91437" e_stop="91308"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACAGTGCTATTTCTTATACCCGTTTTAATAGTCCAAGGGCTTACACATCTTGAGCAGTTGGAAATCTGGTTTCCCTTTTTGAAAGGATTGCTTAGAATGTAAGTGGTAACTGAAAACTTTGGGAAGTTTCAGCTTAATGAGCATGTTACTATACTTTCTGATGTCTTTGCATGGTGGTAAAATAAGTTAATGTGCCTTGCAGAGCATTTGTTAGCCAAGTGATTACCGGATATCTTCCTAGTCTTGTACTTCAACTGTTTCTCTATGTTGTGCCATCCATAATGATTATGTTCTCATCCATACAAGGATACATTGCTATGAGCCAGATAGAGAAAAGTGCATGCATCAAAGTTCTTTGGTTTACTATATGGAACATTTTTTTTGCAAATGTGCTCTCTGGATCGGCTCTCTATCGAGTTGAAATTTTTCTTGAGCCCAAAAATATTCCTGCCATATTAGCTGTAGCAGTTCCAGGACAGGTGAGCGTGGTTCAGTTATCATTATGGCAATCATCTTCTTGAAATAGAAGAAGTTTGATCCTTAAATGTGTTTTAGAAGGTTTATACAATATCAACTGTAGCTTAATCTATTGTTTTTGGATAAATTGTTATCAATGTTTGACGGATAAATAAAAAGGAGAATTTTGGGACACAACAAGCTACATTTGCAAGAAAACATGATGAAGAAGTGATTTCATTGCTTATTTTCTCAATTAAGACAACCACGTAATTGCTTTTTGCAAATATCTTTGCAGCACAGACTAGGGTACATTGGCCACCATATCTATTTTCTTGCAATATATAATGTTAAGTCTAATTTTGATTAGGATGCTAAGTAAGAGGGTAGAGTTAACCATTTGATTTTTGGACTATAACTGAAATAATCTTGACCACAGTTTACAGAACACTTGGGGTTAGTGGTGATCTCTGCAGCTGATGTTACAGAAGGATAATTTAGCTAAGACGAGAAATGGTAAAATGATATTTGAAGACTAAAGTGAATAGGTGCTCCACTCTTGTGGAATATTCTTGCAAAAATCTCTCTTAAGTGAACTTTTATTTTAAGCATTTTCCTACCGAACTCACGAGAAAGTTCCTTTTTTATTGTGATAAATGGTTACTATTAAGAACTAAACATGTTGGTAGGATAGCTAATGTTACCTCTTTTAGCATTTTGCATGGATATGTCTATGGCTTTGACTTCGTAAAAAAAAAAAGATCGACGGCTTTATGTGATTAGTTGAGTCACTAGAATCATTTGATGTTTTCAAATGAAATATTGTAGAATGCAACCGGAAGGCAGAGATCTATGACATCTAATTTTATGTGGAATATGGATCTGATATGCCTGTTTAAGTACTGTTTGTTATACTAAATAACACTAATGAGAAAAGTTCAAATGTTTGATTGATACGTACTTATTGAATAATCAACAGTTACTACTAGAGAACTGAGTTCCTATTCGTCTTGCAGGCAACTTTCTTTATCGCCTATGTGGTTACATCTGGATGGACCAGCACTTCCTCAGAACTTTTTCAGCTGTCGACGCTCGTTTTCAATTTTATAAAGAGAAATATTTGTAGGAAATATGATGATGAGTTTG</genome_strand>
        <mrna_strand>TACAGTGCTATTTCTTATACCCGTTTTAATAGTCCAAGGGCTTACACATCTTGAGCAGTTGGAAATCTGGTTTCCCTTTTTGAAAGGATTGCTTAGAAT........................................................................................................AGCATTTGTTAGCCAAGTGATTACCGGATATCTTCCTAGTCTTGTACTTCAACTGTTTCTCTATGTTGTGCCATCCATAATGATTATGTTCTCATCCATACAAGGATACATTGCTATGAGCCAGATAGAGAAAAGTGCATGCATCAAAGTTCTTTGGTTTACTATATGGAACATTTTTTTTGCAAATGTGCTCTCTGGATCGGCTCTCTATCGAGTTGAAATTTTTCTTGAGCCCAAAAATATTCCTGCCATATTAGCTGTAGCAGTTCCAGGACAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACTTTCTTTATCGCCTATGTGGTTACATCTGGATGGACCAGCACTTCCTCAGAACTTTTTCAGCTGTCGACGCTCGTTTTCAATTTTATAAAGAGAAATATTTGTAGGAAATATGATGATGAGTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E539474" ref_strand="+" ref_description="SGN-E539474 [TUS-59-E1]">
      <seq>aaatagtttacttagaactccactgcaactcttttcgtcccttttcttcgtagtaaagtaaaggtttgacctttggatctctcgtctctatctatcttcttcattaggattagggctacaaaggtcgtatcttctgttgaagctgcgataatctgcattcacgagtgtttattatctgtgctattcgtattctggtgctgttgatttgaagagctcatgttgtaagcaaacagctcagtgaaaggatttaaggaatgatcctctcaacacttttgacttctgttggaataaatcttggactttgttttctgttcatcacattgtattctatattgagaaagcagcctggaaatgcataagtttatgcaccacgcttggttgctgaggggagatctcagcaaatcagtaatttcaatttggagagacttttgccatcatctggttgggtgacaagatcatggcgaccctcataagcatagctcttagccaactcaggcttggatgctgttgatttcatgcgcatttttatattcaggttacttaagcactgttatgcgatgaaggcttgacgagaactttatgtgtattatagcttctgtgccgaacttcacaccattatgttattcccagtgagtgacatttgcattgtatttccaggatttgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="-" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="98718" stop="96894"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98418" g_stop="98277" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="142" r_length="142" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98276" i_stop="97716" i_length="561">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.808" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="97715" g_stop="97194" g_length="522"/>
          <reference_exon_boundary r_type="cDNA" r_start="143" r_stop="664" r_length="522" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="-" ref_id="SGN-E539474" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>664</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E539474" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98418" e_stop="98277"/>
          <exon e_start="97715" e_stop="97194"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATAGTTTACTTAAAACTCCACTGCAACTCTTTTCGTCCCTTTTCTTCGTAGTAAAGTAAAGGTTTGACCTTTGGATCTCTCGTCTCTATCTATCTTCTTCATTAGGATTAGGGCTACAAAGGTCGTATCTTCTGTTGAAGGTAATTAATCATCATTCATCACTTACTTGTACTTGTTTTGTTTTCAATATGTTTACATATCCACTCTAATTAACAAAAATAACTTTATTAAGGAAGTGGAAGATTTCTTCATGGAAAATCGTAACTCCTCTCTAAGTAATGATGCAAAATTTGCAATAATTCGATTATCTTCAATTTACGGAAGAAACAAGAATTGACAGAGGAGAAATGATTTCCAGACTAATGTGTGTGTCTGTATGTGCAAGGAAGGAGAAACCTTTTTATGTCTGTTTACTTACTTTACCTTCCTCTCTTGTGTTCTGGAGCTTCGTAGCCATCATCCGATGACTGAGAAACTACCACTATATCCCAGCCAAATCCATATTACCCTCTTATAGCTAATTTTACAGCTAATGACAACTTAAACTACAAATTAGTTAGCTTTTTTATTTAGCTGTTGGACTTATAACCAGCTTTATTCATGTCATTTCATCTACAAGTTGTATTCCAGTTGCTTCCTTGTCATACTGATCTGTTAAGACAATTTTGAGTTACCAATCTTGATTGTTCATAGTTTTGCAGCTGCGATAATCTGCATTCACGAGTGTTTATTATCTGTGCTATTCGTATTCTGGTGCTGTTGATTTGAAGAGCTCATGTTGTAAGCAAACAGTTCAGTGAAAGGATTTAAGGAATGATCCTCTCAGCACTTTTGACTTCTGTTGGAATAAATCTTGGACTTTGTTTTCTGTTCTTCACATTGTATTCTATATTGAGAAAGCAGCCAGGAAATGCAGAAGTTTATGCACCACGCTTGGTTGCTGAGGGGAGATCTCAGCAAATCAGTAATTTCAATTTGGAGAGACTTTTGCCATCAGCTGGTTGGGTGACAAGAGCATGGCGACCCTCAGAAGCAGAGCTCTTAGCCAACTCAGGCTTGGATGCTGTTGTTTTCATGCGCATTTTTATATTCAGGTTACTTAAGCACTGTTATGCGATGAAGGCTTGACGAGAATTTTATGTTTATTATAGCTTCTGTGCCGAACTTCACACC-TTATGTTTATTCCCAGTGAGTGACATTTGCATTTTATTTCCAGGATTTGC</genome_strand>
        <mrna_strand>AAATAGTTTACTTAGAACTCCACTGCAACTCTTTTCGTCCCTTTTCTTCGTAGTAAAGTAAAGGTTTGACCTTTGGATCTCTCGTCTCTATCTATCTTCTTCATTAGGATTAGGGCTACAAAGGTCGTATCTTCTGTTGAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCGATAATCTGCATTCACGAGTGTTTATTATCTGTGCTATTCGTATTCTGGTGCTGTTGATTTGAAGAGCTCATGTTGTAAGCAAACAGCTCAGTGAAAGGATTTAAGGAATGATCCTCTCAACACTTTTGACTTCTGTTGGAATAAATCTTGGACTTTGTTTTCTGTTCATCACATTGTATTCTATATTGAGAAAGCAGCCTGGAAATGCATAAGTTTATGCACCACGCTTGGTTGCTGAGGGGAGATCTCAGCAAATCAGTAATTTCAATTTGGAGAGACTTTTGCCATCATCTGGTTGGGTGACAAGATCATGGCGACCCTCATAAGCATAGCTCTTAGCCAACTCAGGCTTGGATGCTGTTGATTTCATGCGCATTTTTATATTCAGGTTACTTAAGCACTGTTATGCGATGAAGGCTTGACGAGAACTTTATGTGTATTATAGCTTCTGTGCCGAACTTCACACCATTATG-TTATTCCCAGTGAGTGACATTTGCATTGTATTTCCAGGATTTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E282325" ref_strand="+" ref_description="SGN-E282325 [cLER-18-I3]">
      <seq>aaatagtttacttaaaactccactgcaactcttttcgtcccttttcttcgtagtaaagtaaaggtttgacctttggatctctcgtctctatctatcttcttcattaggattagggctacaaaggtcgtatcttctgttgaagctgcgataatctgcattcacgagtgtttattatctgtgctattcgtattctggtgctgttgatttgaagagctcatgttgtaagcaaacagttcagtgaaaggatttaaggaatgatcctctcagcacttttgacttctgttggaataaatcttggactttgttttctgttcttcacattgtattctatattgagaaagcagccaggaaatgcagaagtttatgcaccacgcttggttgctgaggggagatctcagcaaatcagtaatttcaatttggagagacttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="-" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="98718" stop="97129"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98418" g_stop="98277" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="142" r_length="142" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98276" i_stop="97716" i_length="561">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.808" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="97715" g_stop="97429" g_length="287"/>
          <reference_exon_boundary r_type="cDNA" r_start="143" r_stop="429" r_length="287" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="-" ref_id="SGN-E282325" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>429</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E282325" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98418" e_stop="98277"/>
          <exon e_start="97715" e_stop="97429"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATAGTTTACTTAAAACTCCACTGCAACTCTTTTCGTCCCTTTTCTTCGTAGTAAAGTAAAGGTTTGACCTTTGGATCTCTCGTCTCTATCTATCTTCTTCATTAGGATTAGGGCTACAAAGGTCGTATCTTCTGTTGAAGGTAATTAATCATCATTCATCACTTACTTGTACTTGTTTTGTTTTCAATATGTTTACATATCCACTCTAATTAACAAAAATAACTTTATTAAGGAAGTGGAAGATTTCTTCATGGAAAATCGTAACTCCTCTCTAAGTAATGATGCAAAATTTGCAATAATTCGATTATCTTCAATTTACGGAAGAAACAAGAATTGACAGAGGAGAAATGATTTCCAGACTAATGTGTGTGTCTGTATGTGCAAGGAAGGAGAAACCTTTTTATGTCTGTTTACTTACTTTACCTTCCTCTCTTGTGTTCTGGAGCTTCGTAGCCATCATCCGATGACTGAGAAACTACCACTATATCCCAGCCAAATCCATATTACCCTCTTATAGCTAATTTTACAGCTAATGACAACTTAAACTACAAATTAGTTAGCTTTTTTATTTAGCTGTTGGACTTATAACCAGCTTTATTCATGTCATTTCATCTACAAGTTGTATTCCAGTTGCTTCCTTGTCATACTGATCTGTTAAGACAATTTTGAGTTACCAATCTTGATTGTTCATAGTTTTGCAGCTGCGATAATCTGCATTCACGAGTGTTTATTATCTGTGCTATTCGTATTCTGGTGCTGTTGATTTGAAGAGCTCATGTTGTAAGCAAACAGTTCAGTGAAAGGATTTAAGGAATGATCCTCTCAGCACTTTTGACTTCTGTTGGAATAAATCTTGGACTTTGTTTTCTGTTCTTCACATTGTATTCTATATTGAGAAAGCAGCCAGGAAATGCAGAAGTTTATGCACCACGCTTGGTTGCTGAGGGGAGATCTCAGCAAATCAGTAATTTCAATTTGGAGAGACTTT</genome_strand>
        <mrna_strand>AAATAGTTTACTTAAAACTCCACTGCAACTCTTTTCGTCCCTTTTCTTCGTAGTAAAGTAAAGGTTTGACCTTTGGATCTCTCGTCTCTATCTATCTTCTTCATTAGGATTAGGGCTACAAAGGTCGTATCTTCTGTTGAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCGATAATCTGCATTCACGAGTGTTTATTATCTGTGCTATTCGTATTCTGGTGCTGTTGATTTGAAGAGCTCATGTTGTAAGCAAACAGTTCAGTGAAAGGATTTAAGGAATGATCCTCTCAGCACTTTTGACTTCTGTTGGAATAAATCTTGGACTTTGTTTTCTGTTCTTCACATTGTATTCTATATTGAGAAAGCAGCCAGGAAATGCAGAAGTTTATGCACCACGCTTGGTTGCTGAGGGGAGATCTCAGCAAATCAGTAATTTCAATTTGGAGAGACTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E366368" ref_strand="+" ref_description="SGN-E366368 [cLPT-1-K23]">
      <seq>tatagtttacttaaaaactccactgcaactcttttcgtcccttttcttcatagtaaagtaaaggtttgacctttggatctctcatctctatctatcttcttcattaggattagggctacaaagttcgtatcttctgtttaaggtaattaatcatcattcatcacttactagtacttgttttgttttcaatatgtttcaattacacatatccactctaattaacaaaaataacttaacaaggaagtggaagatttcttcatggaaaatcgtaactcctctctaagtaatgatgcaaaatttgcaataattcgattatcttcaatttacggaagaaacaagaattgacagaggagaaatgatttccagactaatgtgtgtgtctgtatgtgcaaggaaggagaaacctttttatgtctgtttacttactttaccttcctcccttatgttctggagcttcgtagccatcatccgatgactgagaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="-" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="98716" stop="97643"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98417" g_stop="97943" g_length="475"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="482" r_length="482" r_score="0.943"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="-" ref_id="SGN-E366368" ref_strand="+">
        <total_alignment_score>0.943</total_alignment_score>
        <cumulative_length_of_scored_exons>475</cumulative_length_of_scored_exons>
        <coverage percentage="0.985" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E366368" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98417" e_stop="97943"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATAGTTTACTTA-AAACTCCACTGCAACTCTTTTCGTCCCTTTTCTTCGTAGTAAAGTAAAGGTTTGACCTTTGGATCTCTCGTCTCTATCTATCTTCTTCATTAGGATTAGGGCTACAAAGGTCGTATCTTCTGTTGAAGGTAATTAATCATCATTCATCACTTACTTGTACTTGTTTTGTTTTCAATATG--T---TT--ACATATCCACTCTAATTAACAAAAATAACTTTATTAAGGAAGTGGAAGATTTCTTCATGGAAAATCGTAACTCCTCTCTAAGTAATGATGCAAAATTTGCAATAATTCGATTATCTTCAATTTACGGAAGAAACAAGAATTGACAGAGGAGAAATGATTTCCAGACTAATGTGTGTGTCTGTATGTGCAAGGAAGGAGAAACCTTTTTATGTCTGTTTACTTACTTTACCTTCCTCTCTTGTGTTCTGGAGCTTCGTAGCCATCATCCGATGACTGAGAA</genome_strand>
        <mrna_strand>TATAGTTTACTTAAAAACTCCACTGCAACTCTTTTCGTCCCTTTTCTTCATAGTAAAGTAAAGGTTTGACCTTTGGATCTCTCATCTCTATCTATCTTCTTCATTAGGATTAGGGCTACAAAGTTCGTATCTTCTGTTTAAGGTAATTAATCATCATTCATCACTTACTAGTACTTGTTTTGTTTTCAATATGTTTCAATTACACATATCCACTCTAATTAACAAAAATAAC-TTAACAAGGAAGTGGAAGATTTCTTCATGGAAAATCGTAACTCCTCTCTAAGTAATGATGCAAAATTTGCAATAATTCGATTATCTTCAATTTACGGAAGAAACAAGAATTGACAGAGGAGAAATGATTTCCAGACTAATGTGTGTGTCTGTATGTGCAAGGAAGGAGAAACCTTTTTATGTCTGTTTACTTACTTTACCTTCCTCCCTTATGTTCTGGAGCTTCGTAGCCATCATCCGATGACTGAGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E704779" ref_strand="+" ref_description="SGN-E704779 [FA25BA03]">
      <seq>aaagcagcaaattcaagctggatgtagccctctctcagagggaagtgttctagtctcacctagttaaaacacatactgaagattcatgtggttgacaacgcttcatttggtgaaactgacattctttatccttgaccatcattagcatggtgggaggatacattgtgcagctgagaacgtgtcaggcgttaggcgaaatacgttcattgaagcacaagcttcaacctgctggagcaaagatggtttctgatttacaagttgtgatctccattctgaatgctatatggtgctttactgttaacagagccttgttggctttcgggggaagaatagggagggttgcctcgtgcaattttgagcttctatagcggttactgcacttttaagtttgataacttagttgttaccatttttgctgtacaatattgacttgactacagattagcgattgatatatgatggtatgaaaggttactgttagttgataaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="+" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="104968" stop="106056"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="105268" g_stop="105755" g_length="488"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="488" r_length="488" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="492" polyA_stop="542"/>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="+" ref_id="SGN-E704779" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>488</cumulative_length_of_scored_exons>
        <coverage percentage="0.900" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E704779" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="105268" e_stop="105755"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGCAGCAAATTCAAGCTGGATGTAGCCCTCTCTCAGAGGGAAGTGTTCTAGTCTCACCTAGTTAAAACACATACTGAAGATTCATGTGGTTGACAACGCTTCATTTGGTGAAACTGACATTCTTTATCCTTGACCATCATTAGCATGGTGGGAGGATACATTGTGCAGCTGAGAACGTGTCAGGCGTTAGGCGAAATACGTTCATTGAAGCACAAGCTTCAACCTGCTGGAGCAAAGATGGTTTCTGATTTACAAGTTGTGATCTCCATTCTGAATGCTATATGGTGCTTTACTGTTAACAGAGCCTTGTTGGCTTTCGGGGGAAGAATAGGGAGGGTTGCCTCGTGCAATTTTGAGCTTCTATAGCGGTTACTGCACTTTTAAGTTTGATAACTTAGTTGTTACCATTTTTGCTGTACAATATTGACTTGACTACAGATTAGCGATTGATATATGATGGTATGAAAGGTTACTGTTAGTTGATAC</genome_strand>
        <mrna_strand>AAAGCAGCAAATTCAAGCTGGATGTAGCCCTCTCTCAGAGGGAAGTGTTCTAGTCTCACCTAGTTAAAACACATACTGAAGATTCATGTGGTTGACAACGCTTCATTTGGTGAAACTGACATTCTTTATCCTTGACCATCATTAGCATGGTGGGAGGATACATTGTGCAGCTGAGAACGTGTCAGGCGTTAGGCGAAATACGTTCATTGAAGCACAAGCTTCAACCTGCTGGAGCAAAGATGGTTTCTGATTTACAAGTTGTGATCTCCATTCTGAATGCTATATGGTGCTTTACTGTTAACAGAGCCTTGTTGGCTTTCGGGGGAAGAATAGGGAGGGTTGCCTCGTGCAATTTTGAGCTTCTATAGCGGTTACTGCACTTTTAAGTTTGATAACTTAGTTGTTACCATTTTTGCTGTACAATATTGACTTGACTACAGATTAGCGATTGATATATGATGGTATGAAAGGTTACTGTTAGTTGATAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E540835" ref_strand="+" ref_description="SGN-E540835 [TUS-61-F3](-)">
      <seq>ttgtggtataatgcatgtacaaccaggactgctcaagtacttgtgatgccgttgatgctcaaatcgaaactattgagcagtttttagaaatgttgaaggctgtattgaaagtaatgagaagtcagattgctcaatgaggttgagctgatgcctagctttttgatgccgcatgagcgttttgtgttaaaacatcttcaaagacgaggactcagacaaaattgaagttcagcatttggggctttaaatatgggttactaagcttgctgagtggttaaaatcctcttgtcgttattgtcagtgagatggtggcagttatatcaaacataagtgtcacttgtaacttgccaatttttgtgcgctctgtgtatctttgtttctaccgtttttcttttaacatattatggtgtcagactgaaatatctcagttcagagtgtatgtaaatctatttgcaaacaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="-" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="107034" stop="105979"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="106734" g_stop="106279" g_length="456"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="456" r_length="456" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="457" polyA_stop="473"/>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="-" ref_id="SGN-E540835" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>456</cumulative_length_of_scored_exons>
        <coverage percentage="0.964" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E540835" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="106734" e_stop="106279"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTGGTATAATGCATGTACAACCAGGACTGCTCAAGTACTTGTGATGCCGTTGATGCTCAAATCGAAACTATTGAGCAGTTTTTAGAAATGTTGAAGGCTGTATTGAAAGTAATGAGAAGTCAGATTGCTCAATGAGGTTGAGCTGATGCCTAGCTTTTTGATGCCGCATGAGCGTTTTGTGTTAAAACATCTTCAAAGACGAGGACTCAGACAAAATTGAAGTTCAGCATTTGGGGCTTTAAATATGGGTTACTAAGCTTGCTGAGTGGTTAAAATCCTCTTGTCGTTATTGTCAGTGAGATGGTGGCAGTTATATCAAACATAAGTGTCACTTGTAACTTGCCAATTTTTGTGCGCTCTGTGTATCTTTGTTTCTACCGTTTTTCTTTTAACATATTATGGTGTCAGACTGAAATATCTCAGTTCAGAGTGTATGTAAATCTATTTGCAAACA</genome_strand>
        <mrna_strand>TTGTGGTATAATGCATGTACAACCAGGACTGCTCAAGTACTTGTGATGCCGTTGATGCTCAAATCGAAACTATTGAGCAGTTTTTAGAAATGTTGAAGGCTGTATTGAAAGTAATGAGAAGTCAGATTGCTCAATGAGGTTGAGCTGATGCCTAGCTTTTTGATGCCGCATGAGCGTTTTGTGTTAAAACATCTTCAAAGACGAGGACTCAGACAAAATTGAAGTTCAGCATTTGGGGCTTTAAATATGGGTTACTAAGCTTGCTGAGTGGTTAAAATCCTCTTGTCGTTATTGTCAGTGAGATGGTGGCAGTTATATCAAACATAAGTGTCACTTGTAACTTGCCAATTTTTGTGCGCTCTGTGTATCTTTGTTTCTACCGTTTTTCTTTTAACATATTATGGTGTCAGACTGAAATATCTCAGTTCAGAGTGTATGTAAATCTATTTGCAAACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E540838" ref_strand="+" ref_description="SGN-E540838 [TUS-61-F3]">
      <seq>ttgtggtataatgcatgtacaaccaggactgctcaagtacttgtgatgccgttgatgctcaaatcgaaactattgagcagtttttagaaatgttgaaggctgtattgaaagtaatgagaagtcagattgctcaatgaggttgagctgatgcctagctttttgatgccgcatgagcgttttgtgttaaaacatcttcaaagacgaggactcagacaaaattgaagttcagcatttggggctttaaatatgggttactaagcttgctgagtggttaaaatcctcttgtcgttattgtcagtgagatggtggcagttatatcaaacataagtgtcacttgtaacttgccaatttttgtgcgctctgtgtatctttgtttctaccgtttttcttttaacatattatggtgtcagactgaaatatctcagttcagagtgtatgtaaatctatttgcaaacaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="-" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="107034" stop="105979"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="106734" g_stop="106279" g_length="456"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="456" r_length="456" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="457" polyA_stop="473"/>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="-" ref_id="SGN-E540838" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>456</cumulative_length_of_scored_exons>
        <coverage percentage="0.964" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E540838" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="106734" e_stop="106279"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTGGTATAATGCATGTACAACCAGGACTGCTCAAGTACTTGTGATGCCGTTGATGCTCAAATCGAAACTATTGAGCAGTTTTTAGAAATGTTGAAGGCTGTATTGAAAGTAATGAGAAGTCAGATTGCTCAATGAGGTTGAGCTGATGCCTAGCTTTTTGATGCCGCATGAGCGTTTTGTGTTAAAACATCTTCAAAGACGAGGACTCAGACAAAATTGAAGTTCAGCATTTGGGGCTTTAAATATGGGTTACTAAGCTTGCTGAGTGGTTAAAATCCTCTTGTCGTTATTGTCAGTGAGATGGTGGCAGTTATATCAAACATAAGTGTCACTTGTAACTTGCCAATTTTTGTGCGCTCTGTGTATCTTTGTTTCTACCGTTTTTCTTTTAACATATTATGGTGTCAGACTGAAATATCTCAGTTCAGAGTGTATGTAAATCTATTTGCAAACA</genome_strand>
        <mrna_strand>TTGTGGTATAATGCATGTACAACCAGGACTGCTCAAGTACTTGTGATGCCGTTGATGCTCAAATCGAAACTATTGAGCAGTTTTTAGAAATGTTGAAGGCTGTATTGAAAGTAATGAGAAGTCAGATTGCTCAATGAGGTTGAGCTGATGCCTAGCTTTTTGATGCCGCATGAGCGTTTTGTGTTAAAACATCTTCAAAGACGAGGACTCAGACAAAATTGAAGTTCAGCATTTGGGGCTTTAAATATGGGTTACTAAGCTTGCTGAGTGGTTAAAATCCTCTTGTCGTTATTGTCAGTGAGATGGTGGCAGTTATATCAAACATAAGTGTCACTTGTAACTTGCCAATTTTTGTGCGCTCTGTGTATCTTTGTTTCTACCGTTTTTCTTTTAACATATTATGGTGTCAGACTGAAATATCTCAGTTCAGAGTGTATGTAAATCTATTTGCAAACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E297764" ref_strand="+" ref_description="SGN-E297764 [cLET-38-C14]">
      <seq>tgtggtataatgcatgtacaaccaggactgctcaagtacttgtgatgccgttgatgctcaaatcgaaactattgagcagtttttagaaatgttgaaggctgtattgaaagtaatgagaagtcagattgctcaatgaggttgagctgatgcctagctttttgatgccgcatgagcgttttgtgttaaaacatcttcaaagacgaggactcagacaaaattgaagttcagcatttggggctttaaatatgggttactaagcttgctgagtggttaaaatcctcttgtcgttattgtcagtgagatggtggcagttatatcaaacataagtgtcacttgtaacttgccaatttttgtgcgctctgtgtatctttgtttctaccgtttttcttttaacatattatggtgtcagactgaaatatctcagttcagagtgtatgtaaatctatttgcaaaccnnanaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="-" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="107033" stop="105980"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="106733" g_stop="106280" g_length="454"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="454" r_length="454" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="458" polyA_stop="472"/>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="-" ref_id="SGN-E297764" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>454</cumulative_length_of_scored_exons>
        <coverage percentage="0.962" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E297764" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="106733" e_stop="106280"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTGGTATAATGCATGTACAACCAGGACTGCTCAAGTACTTGTGATGCCGTTGATGCTCAAATCGAAACTATTGAGCAGTTTTTAGAAATGTTGAAGGCTGTATTGAAAGTAATGAGAAGTCAGATTGCTCAATGAGGTTGAGCTGATGCCTAGCTTTTTGATGCCGCATGAGCGTTTTGTGTTAAAACATCTTCAAAGACGAGGACTCAGACAAAATTGAAGTTCAGCATTTGGGGCTTTAAATATGGGTTACTAAGCTTGCTGAGTGGTTAAAATCCTCTTGTCGTTATTGTCAGTGAGATGGTGGCAGTTATATCAAACATAAGTGTCACTTGTAACTTGCCAATTTTTGTGCGCTCTGTGTATCTTTGTTTCTACCGTTTTTCTTTTAACATATTATGGTGTCAGACTGAAATATCTCAGTTCAGAGTGTATGTAAATCTATTTGCAAAC</genome_strand>
        <mrna_strand>TGTGGTATAATGCATGTACAACCAGGACTGCTCAAGTACTTGTGATGCCGTTGATGCTCAAATCGAAACTATTGAGCAGTTTTTAGAAATGTTGAAGGCTGTATTGAAAGTAATGAGAAGTCAGATTGCTCAATGAGGTTGAGCTGATGCCTAGCTTTTTGATGCCGCATGAGCGTTTTGTGTTAAAACATCTTCAAAGACGAGGACTCAGACAAAATTGAAGTTCAGCATTTGGGGCTTTAAATATGGGTTACTAAGCTTGCTGAGTGGTTAAAATCCTCTTGTCGTTATTGTCAGTGAGATGGTGGCAGTTATATCAAACATAAGTGTCACTTGTAACTTGCCAATTTTTGTGCGCTCTGTGTATCTTTGTTTCTACCGTTTTTCTTTTAACATATTATGGTGTCAGACTGAAATATCTCAGTTCAGAGTGTATGTAAATCTATTTGCAAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E223984" ref_strand="+" ref_description="SGN-E223984 [cLEL-19-O1](-)">
      <seq>gagcagtttttagaaatgttgaaggctgtattgaaagtaatgagaagtcagattgctcaatgaggttgagctgatgcctagctttttgatgccgcatgagcgttttgtgttaaaacatcttcaaagacgaggactcagacaaaattgaagttcagcatttggggctttaaatatgggttactaagcttgctgagtggttaaaatcctcttgtcgttattgtcagtgagatggtggcagttatatcaaacataagtgtcacttgtaacttgccaatttttgtgcgctctgtgtatctttgtttctaccgtttttcttttaacatattatggtgtcagactgaaatatctcagttcagagtgtatgtaaatctatttgcaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="-" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="106960" stop="105979"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="106660" g_stop="106281" g_length="380"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="380" r_length="380" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="381" polyA_stop="396"/>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="-" ref_id="SGN-E223984" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>380</cumulative_length_of_scored_exons>
        <coverage percentage="0.960" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E223984" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="106660" e_stop="106281"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGCAGTTTTTAGAAATGTTGAAGGCTGTATTGAAAGTAATGAGAAGTCAGATTGCTCAATGAGGTTGAGCTGATGCCTAGCTTTTTGATGCCGCATGAGCGTTTTGTGTTAAAACATCTTCAAAGACGAGGACTCAGACAAAATTGAAGTTCAGCATTTGGGGCTTTAAATATGGGTTACTAAGCTTGCTGAGTGGTTAAAATCCTCTTGTCGTTATTGTCAGTGAGATGGTGGCAGTTATATCAAACATAAGTGTCACTTGTAACTTGCCAATTTTTGTGCGCTCTGTGTATCTTTGTTTCTACCGTTTTTCTTTTAACATATTATGGTGTCAGACTGAAATATCTCAGTTCAGAGTGTATGTAAATCTATTTGCAAA</genome_strand>
        <mrna_strand>GAGCAGTTTTTAGAAATGTTGAAGGCTGTATTGAAAGTAATGAGAAGTCAGATTGCTCAATGAGGTTGAGCTGATGCCTAGCTTTTTGATGCCGCATGAGCGTTTTGTGTTAAAACATCTTCAAAGACGAGGACTCAGACAAAATTGAAGTTCAGCATTTGGGGCTTTAAATATGGGTTACTAAGCTTGCTGAGTGGTTAAAATCCTCTTGTCGTTATTGTCAGTGAGATGGTGGCAGTTATATCAAACATAAGTGTCACTTGTAACTTGCCAATTTTTGTGCGCTCTGTGTATCTTTGTTTCTACCGTTTTTCTTTTAACATATTATGGTGTCAGACTGAAATATCTCAGTTCAGAGTGTATGTAAATCTATTTGCAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E223839" ref_strand="+" ref_description="SGN-E223839 [cLEL-19-O1](-)">
      <seq>agtttttagaaatgttgaaggctgtattgaaagtaatgagaagtcagattgctcaatgaggttgagctcatgcctagctttttgatgccgcatgagcgttttgtgttaaaacatcttcaaagacgaggactcagacaaaattgaagttcagcatttggggctttaaatatgggttactaagcttgctgagtggttaaaatcctcttgtcgttattgtcagtcacatggtggcagttatatcaaacataagtgtcacttgtaacttgccaatttttgtgcgctctgtgtatctttgtttctaccgtttttcttttaacatattatggtgtcagactgaaatatctcagttcagagtgtatgtaaatctatttgcaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="-" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="106956" stop="105979"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="106656" g_stop="106281" g_length="376"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="376" r_length="376" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="377" polyA_stop="391"/>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="-" ref_id="SGN-E223839" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>376</cumulative_length_of_scored_exons>
        <coverage percentage="0.962" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E223839" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="106656" e_stop="106281"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTTTTTAGAAATGTTGAAGGCTGTATTGAAAGTAATGAGAAGTCAGATTGCTCAATGAGGTTGAGCTGATGCCTAGCTTTTTGATGCCGCATGAGCGTTTTGTGTTAAAACATCTTCAAAGACGAGGACTCAGACAAAATTGAAGTTCAGCATTTGGGGCTTTAAATATGGGTTACTAAGCTTGCTGAGTGGTTAAAATCCTCTTGTCGTTATTGTCAGTGAGATGGTGGCAGTTATATCAAACATAAGTGTCACTTGTAACTTGCCAATTTTTGTGCGCTCTGTGTATCTTTGTTTCTACCGTTTTTCTTTTAACATATTATGGTGTCAGACTGAAATATCTCAGTTCAGAGTGTATGTAAATCTATTTGCAAA</genome_strand>
        <mrna_strand>AGTTTTTAGAAATGTTGAAGGCTGTATTGAAAGTAATGAGAAGTCAGATTGCTCAATGAGGTTGAGCTCATGCCTAGCTTTTTGATGCCGCATGAGCGTTTTGTGTTAAAACATCTTCAAAGACGAGGACTCAGACAAAATTGAAGTTCAGCATTTGGGGCTTTAAATATGGGTTACTAAGCTTGCTGAGTGGTTAAAATCCTCTTGTCGTTATTGTCAGTCACATGGTGGCAGTTATATCAAACATAAGTGTCACTTGTAACTTGCCAATTTTTGTGCGCTCTGTGTATCTTTGTTTCTACCGTTTTTCTTTTAACATATTATGGTGTCAGACTGAAATATCTCAGTTCAGAGTGTATGTAAATCTATTTGCAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E289882" ref_strand="+" ref_description="SGN-E289882 [cLET-9-A4]">
      <seq>tgtggtataatgcatgtacaaccaggactgctcaagtacttgtgatgccggtgatgctcaaatcgaaactattgagcagtttttagaaatgttgaaggctgtattgaaagtaatgagaagtcagattgctcaatgaggttgagctgatgcctagctttttgatgccgcatgagcgttttgtgttaaaacatcttcaaagaccaggactcagacaaaattgaagttcagcatttggggctttaaatatgggttactaagcttgctgagtggttaaaatcctcttgtcgttattgtcagtgagatggtggcagttatatcaaacataagtgtcacttgtaacttgccaatttttgtgcgctctgtgtatctttgattctaccgattttcttttaacatattatggtgtcagactgaaatatctcagttcagagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0042B19-o1aiO/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLm0042B19.2" temp_strand="-" temp_description="C02SLm0042B19.2  AC215477.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0042B19 sequenced_by:kribb upload_account_name:korea">
        <position start="107033" stop="106002"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="106733" g_stop="106302" g_length="432"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="432" r_length="432" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0042B19.2" gen_strand="-" ref_id="SGN-E289882" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>432</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0042B19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E289882" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="106733" e_stop="106302"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTGGTATAATGCATGTACAACCAGGACTGCTCAAGTACTTGTGATGCCGTTGATGCTCAAATCGAAACTATTGAGCAGTTTTTAGAAATGTTGAAGGCTGTATTGAAAGTAATGAGAAGTCAGATTGCTCAATGAGGTTGAGCTGATGCCTAGCTTTTTGATGCCGCATGAGCGTTTTGTGTTAAAACATCTTCAAAGACGAGGACTCAGACAAAATTGAAGTTCAGCATTTGGGGCTTTAAATATGGGTTACTAAGCTTGCTGAGTGGTTAAAATCCTCTTGTCGTTATTGTCAGTGAGATGGTGGCAGTTATATCAAACATAAGTGTCACTTGTAACTTGCCAATTTTTGTGCGCTCTGTGTATCTTTGTTTCTACCGTTTTTCTTTTAACATATTATGGTGTCAGACTGAAATATCTCAGTTCAGAGT</genome_strand>
        <mrna_strand>TGTGGTATAATGCATGTACAACCAGGACTGCTCAAGTACTTGTGATGCCGGTGATGCTCAAATCGAAACTATTGAGCAGTTTTTAGAAATGTTGAAGGCTGTATTGAAAGTAATGAGAAGTCAGATTGCTCAATGAGGTTGAGCTGATGCCTAGCTTTTTGATGCCGCATGAGCGTTTTGTGTTAAAACATCTTCAAAGACCAGGACTCAGACAAAATTGAAGTTCAGCATTTGGGGCTTTAAATATGGGTTACTAAGCTTGCTGAGTGGTTAAAATCCTCTTGTCGTTATTGTCAGTGAGATGGTGGCAGTTATATCAAACATAAGTGTCACTTGTAACTTGCCAATTTTTGTGCGCTCTGTGTATCTTTGATTCTACCGATTTTCTTTTAACATATTATGGTGTCAGACTGAAATATCTCAGTTCAGAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>117</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="21002" PGL_stop="21276"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="21002" e_stop="21276"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.920"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.920">
            <gDNA_exon_boundary e_start="21002" e_stop="21276" e_length="275"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21002" stop="21276"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223449" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTGCAGGCACAGGTGGACGCTAGAGCTACAGGTTCGTTGTTGCAGCTATCCGGACATCAGTATTCATCCGGAGTTTGGTAGGTCCTCATGCTTTCGAGGATGCTACTGTTTTACATTCTAGCGTAGTTTTAGAGTTGAGCTAGCGGAACATGTTCCACTAGCGTTTCTTTCCTGTTTTGGTTCAAACTTTGTATTGGTGCTATTTTGGCCGATATACAATTAATACTTAATGAATTATTTCTTTCAGTTGCTTATCTCTTAAATGTTAGATGGTT</gDNA_template>
            <first_frame> V  Q  A  Q  V  D  A  R  A  T  G  S  L  L  Q  L  S  G  H  Q  Y  S  S  G  V  W  *  V  L  M  L  S  R  M  L  L  F  Y  I  L  A  *  F  *  S  *  A  S  G  T  C  S  T  S  V  S  F  L  F  W  F  K  L  C  I  G  A  I  L  A  D  I  Q  L  I  L  N  E  L  F  L  S  V  A  Y  L  L  N  V  R  W   </first_frame>
            <second_frame>  C  R  H  R  W  T  L  E  L  Q  V  R  C  C  S  Y  P  D  I  S  I  H  P  E  F  G  R  S  S  C  F  R  G  C  Y  C  F  T  F  *  R  S  F  R  V  E  L  A  E  H  V  P  L  A  F  L  S  C  F  G  S  N  F  V  L  V  L  F  W  P  I  Y  N  *  Y  L  M  N  Y  F  F  Q  L  L  I  S  *  M  L  D  G  </second_frame>
            <third_frame>   A  G  T  G  G  R  *  S  Y  R  F  V  V  A  A  I  R  T  S  V  F  I  R  S  L  V  G  P  H  A  F  E  D  A  T  V  L  H  S  S  V  V  L  E  L  S  *  R  N  M  F  H  *  R  F  F  P  V  L  V  Q  T  L  Y  W  C  Y  F  G  R  Y  T  I  N  T  *  *  I  I  S  F  S  C  L  S  L  K  C  *  M  V </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLm0042B19.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="45314" PGL_stop="46050"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="45314" e_stop="45565"/>
            <exon e_start="45667" e_stop="45784"/>
            <exon e_start="45864" e_stop="45900"/>
            <exon e_start="46000" e_stop="46050"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.769" acc_prob="0.412" e_score="1.000"/>
          <exon-intron don_prob="0.668" acc_prob="0.966" e_score="0.992"/>
          <exon-intron don_prob="0.730" acc_prob="0.945" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="45314" e_stop="45565" e_length="252"/>
          </exon>
          <intron i_serial="1" don_prob="0.769" acc_prob="0.412">
            <gDNA_intron_boundary i_start="45566" i_stop="45666" i_length="101"/>
          </intron>
          <exon e_serial="2" e_score="0.992">
            <gDNA_exon_boundary e_start="45667" e_stop="45784" e_length="118"/>
          </exon>
          <intron i_serial="2" don_prob="0.668" acc_prob="0.966">
            <gDNA_intron_boundary i_start="45785" i_stop="45863" i_length="79"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="45864" e_stop="45900" e_length="37"/>
          </exon>
          <intron i_serial="3" don_prob="0.730" acc_prob="0.945">
            <gDNA_intron_boundary i_start="45901" i_stop="45999" i_length="99"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="46000" e_stop="46050" e_length="51"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45314" stop="45565"/>
              <exon start="45667" stop="45784"/>
              <exon start="45864" stop="45900"/>
              <exon start="46000" stop="46050"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E335305" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCAAACACAAACAAGTAAAAAATTTGATTTACATACTTCACTTCTAAAGCTATACTCTGATCTTATTGATCTTTTGGTTTGTATATATAATCCTGAAGCCCAAACAAGGTCTTGCATTCTTTGACCCTTGTGCATCCCAGTGTCCCCTTCAAAATTGTTGATATTGAAAGGTCCATATTTGATACACCAGTTAACTCTGGTTTTTATGATGTTGTATATTTGCATGCAGTGAGGATGACCTGCTTTGCCCAG : AATACATCTCTGGTGGGGTTCATCTGAGTTCCCTTAACAAATTGAGTGCAAACAATTGTTCATTCAAGCTTTCAGGATACATCTCAGGTCCTGATGTTTACCCAGTGGAAGTATACAA : TGTGGTGACGGACTGACGGTTTATTTTCAGTCGAAAG : GCCAAGTATGAAATGAAACTTGTTAACATTTGGAATAGCAAATTACAAGCT</gDNA_template>
            <first_frame> S  N  T  N  K  *  K  I  *  F  T  Y  F  T  S  K  A  I  L  *  S  Y  *  S  F  G  L  Y  I  *  S  *  S  P  N  K  V  L  H  S  L  T  L  V  H  P  S  V  P  F  K  I  V  D  I  E  R  S  I  F  D  T  P  V  N  S  G  F  Y  D  V  V  Y  L  H  A  V  R  M  T  C  F  A  Q  :  N  T  S  L  V  G  F  I  *  V  P  L  T  N  *  V  Q  T  I  V  H  S  S  F  Q  D  T  S  Q  V  L  M  F  T  Q  W  K  Y  T   : M  W  *  R  T  D  G  L  F  S  V  E  R :   P  S  M  K  *  N  L  L  T  F  G  I  A  N  Y  K   </first_frame>
            <second_frame>  Q  T  Q  T  S  K  K  F  D  L  H  T  S  L  L  K  L  Y  S  D  L  I  D  L  L  V  C  I  Y  N  P  E  A  Q  T  R  S  C  I  L  *  P  L  C  I  P  V  S  P  S  K  L  L  I  L  K  G  P  Y  L  I  H  Q  L  T  L  V  F  M  M  L  Y  I  C  M  Q  *  G  *  P  A  L  P  R :   I  H  L  W  W  G  S  S  E  F  P  *  Q  I  E  C  K  Q  L  F  I  Q  A  F  R  I  H  L  R  S  *  C  L  P  S  G  S  I  Q  :  C  G  D  G  L  T  V  Y  F  Q  S  K   : G  Q  V  *  N  E  T  C  *  H  L  E  *  Q  I  T  S  </second_frame>
            <third_frame>   K  H  K  Q  V  K  N  L  I  Y  I  L  H  F  *  S  Y  T  L  I  L  L  I  F  W  F  V  Y  I  I  L  K  P  K  Q  G  L  A  F  F  D  P  C  A  S  Q  C  P  L  Q  N  C  *  Y  *  K  V  H  I  *  Y  T  S  *  L  W  F  L  *  C  C  I  F  A  C  S  E  D  D  L  L  C  P   : E  Y  I  S  G  G  V  H  L  S  S  L  N  K  L  S  A  N  N  C  S  F  K  L  S  G  Y  I  S  G  P  D  V  Y  P  V  E  V  Y  N :   V  V  T  D  *  R  F  I  F  S  R  K  :  A  K  Y  E  M  K  L  V  N  I  W  N  S  K  L  Q  A </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLm0042B19.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="48682" PGL_stop="51474"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="48682" e_stop="48930"/>
            <exon e_start="50729" e_stop="51474"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.994" acc_prob="0.854" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="48682" e_stop="48930" e_length="249"/>
          </exon>
          <intron i_serial="1" don_prob="0.994" acc_prob="0.854">
            <gDNA_intron_boundary i_start="48931" i_stop="50728" i_length="1798"/>
          </intron>
          <exon e_serial="2" e_score="0.998">
            <gDNA_exon_boundary e_start="50729" e_stop="51474" e_length="746"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48682" stop="48930"/>
              <exon start="50729" stop="51258"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E745916" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48689" stop="48930"/>
              <exon start="50729" stop="51262"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E552253" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48689" stop="48930"/>
              <exon start="50729" stop="51260"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E552060" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48693" stop="48930"/>
              <exon start="50729" stop="51278"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E733576" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48696" stop="48930"/>
              <exon start="50729" stop="51140"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E729374" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48696" stop="48930"/>
              <exon start="50729" stop="50955"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E301548" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48697" stop="48930"/>
              <exon start="50729" stop="51128"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345805" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48697" stop="48930"/>
              <exon start="50729" stop="51101"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310999" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48704" stop="48930"/>
              <exon start="50729" stop="51305"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E733991" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48706" stop="48930"/>
              <exon start="50729" stop="51055"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E285313" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48709" stop="48930"/>
              <exon start="50729" stop="51065"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E338660" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48792" stop="48930"/>
              <exon start="50729" stop="51150"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309399" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50785" stop="51339"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E712600" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50809" stop="51348"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E398119" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51059" stop="51474"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357724" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGAAGAAGGAAGAGCTTAGCTAAGAACTCTAGAGGTTGCGAGAAGATATTATTGTAGCAATGGAGGCGGTGAGAAGGAGGAGCTTTGGTTGGCCGACAATGGCGGTGGTGCTAACATGCGCTTTGCTCGTGATGCTGCCTCAAGTGTACTCGATTCGGTACATTGTGGGATCGAGATTCGGGTGGACTAACAGTGTCAATTACACCAATTGGGCTAAGGACAAACATTTCTACAACGGAGACTGGCTCT : TTTTTGTGTATGACAGGAACCAGATGAATGTGCTTGAGCTAAACAAGACAGACTACGAGAGCTGCAATACTGATCATCCTCTCCACAATTGGACTACTGGAGCAGGAAGGGACGTTGTTCCGCTTAATGTGACTAAAACCTACTATTTCGCTAGTGGAAAAGGATACTGTTATGGAGGCATGAAAGTGGCTATTCATGTTGAAAAGGCACCTCCACCTCCAAAAGCTGCTCCAGTACGCAGCAGTTCAACAAATTTGCTCAACTCATTTAAAGCACAGATAATGATACCAGCTCTTTTCGCAACCGCTGCTGTGTGGGATGCATTTCTTCTGCTCTGGTAGGATGGTTAAGTGAACCATACATGCTGGATGCTTCAGATAATTAGTTAAACCAAGTGTCAAGAAAGTGTTTAGATTTATTTTTTGTGTGCTTGTATTTTCTTTTTTCTTGAAAGTTACCATCTTTTTTTTTTTTTACCACCAAGTGCCATTATCATTTGACCTGAAAATCAATTTTTTATTTCAGATCAAATTGGTGTGTGGGGGTTGATCTGAAAAATTTGTTTATTTATGTTGTTACCTAAACAAGTTTACAATTGTTTCATTGGAGAAATTGATTGCGTGGATCACGGAGACCTTTCATGTTACTCTTTTCATTTGTTATACCTCTCTTAATTACTTATTGTTGTATGTTAGCTGTCTCGATTTGACTTTGGAGAGTTGCAGTATATTCCAAGTTTATGCAAA</gDNA_template>
            <first_frame> R  R  R  K  S  L  A  K  N  S  R  G  C  E  K  I  L  L  *  Q  W  R  R  *  E  G  G  A  L  V  G  R  Q  W  R  W  C  *  H  A  L  C  S  *  C  C  L  K  C  T  R  F  G  T  L  W  D  R  D  S  G  G  L  T  V  S  I  T  P  I  G  L  R  T  N  I  S  T  T  E  T  G  S  :  F  L  C  M  T  G  T  R  *  M  C  L  S  *  T  R  Q  T  T  R  A  A  I  L  I  I  L  S  T  I  G  L  L  E  Q  E  G  T  L  F  R  L  M  *  L  K  P  T  I  S  L  V  E  K  D  T  V  M  E  A  *  K  W  L  F  M  L  K  R  H  L  H  L  Q  K  L  L  Q  Y  A  A  V  Q  Q  I  C  S  T  H  L  K  H  R  *  *  Y  Q  L  F  S  Q  P  L  L  C  G  M  H  F  F  C  S  G  R  M  V  K  *  T  I  H  A  G  C  F  R  *  L  V  K  P  S  V  K  K  V  F  R  F  I  F  C  V  L  V  F  S  F  F  L  K  V  T  I  F  F  F  F  Y  H  Q  V  P  L  S  F  D  L  K  I  N  F  L  F  Q  I  K  L  V  C  G  G  *  S  E  K  F  V  Y  L  C  C  Y  L  N  K  F  T  I  V  S  L  E  K  L  I  A  W  I  T  E  T  F  H  V  T  L  F  I  C  Y  T  S  L  N  Y  L  L  L  Y  V  S  C  L  D  L  T  L  E  S  C  S  I  F  Q  V  Y  A   </first_frame>
            <second_frame>  E  E  G  R  A  *  L  R  T  L  E  V  A  R  R  Y  Y  C  S  N  G  G  G  E  K  E  E  L  W  L  A  D  N  G  G  G  A  N  M  R  F  A  R  D  A  A  S  S  V  L  D  S  V  H  C  G  I  E  I  R  V  D  *  Q  C  Q  L  H  Q  L  G  *  G  Q  T  F  L  Q  R  R  L  A  L :   F  C  V  *  Q  E  P  D  E  C  A  *  A  K  Q  D  R  L  R  E  L  Q  Y  *  S  S  S  P  Q  L  D  Y  W  S  R  K  G  R  C  S  A  *  C  D  *  N  L  L  F  R  *  W  K  R  I  L  L  W  R  H  E  S  G  Y  S  C  *  K  G  T  S  T  S  K  S  C  S  S  T  Q  Q  F  N  K  F  A  Q  L  I  *  S  T  D  N  D  T  S  S  F  R  N  R  C  C  V  G  C  I  S  S  A  L  V  G  W  L  S  E  P  Y  M  L  D  A  S  D  N  *  L  N  Q  V  S  R  K  C  L  D  L  F  F  V  C  L  Y  F  L  F  S  *  K  L  P  S  F  F  F  F  T  T  K  C  H  Y  H  L  T  *  K  S  I  F  Y  F  R  S  N  W  C  V  G  V  D  L  K  N  L  F  I  Y  V  V  T  *  T  S  L  Q  L  F  H  W  R  N  *  L  R  G  S  R  R  P  F  M  L  L  F  S  F  V  I  P  L  L  I  T  Y  C  C  M  L  A  V  S  I  *  L  W  R  V  A  V  Y  S  K  F  M  Q  </second_frame>
            <third_frame>   K  K  E  E  L  S  *  E  L  *  R  L  R  E  D  I  I  V  A  M  E  A  V  R  R  R  S  F  G  W  P  T  M  A  V  V  L  T  C  A  L  L  V  M  L  P  Q  V  Y  S  I  R  Y  I  V  G  S  R  F  G  W  T  N  S  V  N  Y  T  N  W  A  K  D  K  H  F  Y  N  G  D  W  L   : F  F  V  Y  D  R  N  Q  M  N  V  L  E  L  N  K  T  D  Y  E  S  C  N  T  D  H  P  L  H  N  W  T  T  G  A  G  R  D  V  V  P  L  N  V  T  K  T  Y  Y  F  A  S  G  K  G  Y  C  Y  G  G  M  K  V  A  I  H  V  E  K  A  P  P  P  P  K  A  A  P  V  R  S  S  S  T  N  L  L  N  S  F  K  A  Q  I  M  I  P  A  L  F  A  T  A  A  V  W  D  A  F  L  L  L  W  *  D  G  *  V  N  H  T  C  W  M  L  Q  I  I  S  *  T  K  C  Q  E  S  V  *  I  Y  F  L  C  A  C  I  F  F  F  L  E  S  Y  H  L  F  F  F  L  P  P  S  A  I  I  I  *  P  E  N  Q  F  F  I  S  D  Q  I  G  V  W  G  L  I  *  K  I  C  L  F  M  L  L  P  K  Q  V  Y  N  C  F  I  G  E  I  D  C  V  D  H  G  D  L  S  C  Y  S  F  H  L  L  Y  L  S  *  L  L  I  V  V  C  *  L  S  R  F  D  F  G  E  L  Q  Y  I  P  S  L  C  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0042B19.2" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="48714" stop="48930"/>
                    <exon start="50729" stop="51069"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>555</number_coding_nucleotides>
                  <number_encoded_amino_acids>185</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RLREDIIVAMEAVRRRSFGWPTMAVVLTCALLVMLPQVYSIRYIVGSRFGWTNSVNYTNWAKDKHFYNGDWLFFVYDRNQMNVLELNKTDYESCNTDHPLHNWTTGAGRDVVPLNVTKTYYFASGKGYCYGGMKVAIHVEKAPPPPKAAPVRSSSTNLLNSFKAQIMIPALFATAAVWDAFLLLW*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0042B19.2" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="51278" stop="51472"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SEKFVYLCCYLNKFTIVSLEKLIAWITETFHVTLFICYTSLNYLLLYVSCLDLTLESCSIFQVYA</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="50658" e_stop="51474"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="50658" e_stop="51474" e_length="817"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50658" stop="51348"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E398067" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50699" stop="51358"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E393855" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50785" stop="51339"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E712600" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50809" stop="51348"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E398119" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51059" stop="51474"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357724" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGATTTGTAAAATATTGAGATATCTTCAGTTATTTGTCGTTGTTTAGTAACTCTTCCTTCTCCCATCCCAGTTTTTGTGTATGACAGGAACCAGATGAATGTGCTTGAGCTAAACAAGACAGACTACGAGAGCTGCAATACTGATCATCCTCTCCACAATTGGACTACTGGAGCAGGAAGGGACGTTGTTCCGCTTAATGTGACTAAAACCTACTATTTCGCTAGTGGAAAAGGATACTGTTATGGAGGCATGAAAGTGGCTATTCATGTTGAAAAGGCACCTCCACCTCCAAAAGCTGCTCCAGTACGCAGCAGTTCAACAAATTTGCTCAACTCATTTAAAGCACAGATAATGATACCAGCTCTTTTCGCAACCGCTGCTGTGTGGGATGCATTTCTTCTGCTCTGGTAGGATGGTTAAGTGAACCATACATGCTGGATGCTTCAGATAATTAGTTAAACCAAGTGTCAAGAAAGTGTTTAGATTTATTTTTTGTGTGCTTGTATTTTCTTTTTTCTTGAAAGTTACCATCTTTTTTTTTTTTTACCACCAAGTGCCATTATCATTTGACCTGAAAATCAATTTTTTATTTCAGATCAAATTGGTGTGTGGGGGTTGATCTGAAAAATTTGTTTATTTATGTTGTTACCTAAACAAGTTTACAATTGTTTCATTGGAGAAATTGATTGCGTGGATCACGGAGACCTTTCATGTTACTCTTTTCATTTGTTATACCTCTCTTAATTACTTATTGTTGTATGTTAGCTGTCTCGATTTGACTTTGGAGAGTTGCAGTATATTCCAAGTTTATGCAAA</gDNA_template>
            <first_frame> R  F  V  K  Y  *  D  I  F  S  Y  L  S  L  F  S  N  S  S  F  S  H  P  S  F  C  V  *  Q  E  P  D  E  C  A  *  A  K  Q  D  R  L  R  E  L  Q  Y  *  S  S  S  P  Q  L  D  Y  W  S  R  K  G  R  C  S  A  *  C  D  *  N  L  L  F  R  *  W  K  R  I  L  L  W  R  H  E  S  G  Y  S  C  *  K  G  T  S  T  S  K  S  C  S  S  T  Q  Q  F  N  K  F  A  Q  L  I  *  S  T  D  N  D  T  S  S  F  R  N  R  C  C  V  G  C  I  S  S  A  L  V  G  W  L  S  E  P  Y  M  L  D  A  S  D  N  *  L  N  Q  V  S  R  K  C  L  D  L  F  F  V  C  L  Y  F  L  F  S  *  K  L  P  S  F  F  F  F  T  T  K  C  H  Y  H  L  T  *  K  S  I  F  Y  F  R  S  N  W  C  V  G  V  D  L  K  N  L  F  I  Y  V  V  T  *  T  S  L  Q  L  F  H  W  R  N  *  L  R  G  S  R  R  P  F  M  L  L  F  S  F  V  I  P  L  L  I  T  Y  C  C  M  L  A  V  S  I  *  L  W  R  V  A  V  Y  S  K  F  M  Q  </first_frame>
            <second_frame>  D  L  *  N  I  E  I  S  S  V  I  C  R  C  L  V  T  L  P  S  P  I  P  V  F  V  Y  D  R  N  Q  M  N  V  L  E  L  N  K  T  D  Y  E  S  C  N  T  D  H  P  L  H  N  W  T  T  G  A  G  R  D  V  V  P  L  N  V  T  K  T  Y  Y  F  A  S  G  K  G  Y  C  Y  G  G  M  K  V  A  I  H  V  E  K  A  P  P  P  P  K  A  A  P  V  R  S  S  S  T  N  L  L  N  S  F  K  A  Q  I  M  I  P  A  L  F  A  T  A  A  V  W  D  A  F  L  L  L  W  *  D  G  *  V  N  H  T  C  W  M  L  Q  I  I  S  *  T  K  C  Q  E  S  V  *  I  Y  F  L  C  A  C  I  F  F  F  L  E  S  Y  H  L  F  F  F  L  P  P  S  A  I  I  I  *  P  E  N  Q  F  F  I  S  D  Q  I  G  V  W  G  L  I  *  K  I  C  L  F  M  L  L  P  K  Q  V  Y  N  C  F  I  G  E  I  D  C  V  D  H  G  D  L  S  C  Y  S  F  H  L  L  Y  L  S  *  L  L  I  V  V  C  *  L  S  R  F  D  F  G  E  L  Q  Y  I  P  S  L  C  K </second_frame>
            <third_frame>   I  C  K  I  L  R  Y  L  Q  L  F  V  V  V  *  *  L  F  L  L  P  S  Q  F  L  C  M  T  G  T  R  *  M  C  L  S  *  T  R  Q  T  T  R  A  A  I  L  I  I  L  S  T  I  G  L  L  E  Q  E  G  T  L  F  R  L  M  *  L  K  P  T  I  S  L  V  E  K  D  T  V  M  E  A  *  K  W  L  F  M  L  K  R  H  L  H  L  Q  K  L  L  Q  Y  A  A  V  Q  Q  I  C  S  T  H  L  K  H  R  *  *  Y  Q  L  F  S  Q  P  L  L  C  G  M  H  F  F  C  S  G  R  M  V  K  *  T  I  H  A  G  C  F  R  *  L  V  K  P  S  V  K  K  V  F  R  F  I  F  C  V  L  V  F  S  F  F  L  K  V  T  I  F  F  F  F  Y  H  Q  V  P  L  S  F  D  L  K  I  N  F  L  F  Q  I  K  L  V  C  G  G  *  S  E  K  F  V  Y  L  C  C  Y  L  N  K  F  T  I  V  S  L  E  K  L  I  A  W  I  T  E  T  F  H  V  T  L  F  I  C  Y  T  S  L  N  Y  L  L  L  Y  V  S  C  L  D  L  T  L  E  S  C  S  I  F  Q  V  Y  A   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0042B19.2" strand="+"/>
                <serials PGL_serial="3" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="50668" stop="51069"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>399</number_coding_nucleotides>
                  <number_encoded_amino_acids>133</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NIEISSVICRCLVTLPSPIPVFVYDRNQMNVLELNKTDYESCNTDHPLHNWTTGAGRDVVPLNVTKTYYFASGKGYCYGGMKVAIHVEKAPPPPKAAPVRSSSTNLLNSFKAQIMIPALFATAAVWDAFLLLW*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0042B19.2" strand="+"/>
                <serials PGL_serial="3" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="51278" stop="51472"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SEKFVYLCCYLNKFTIVSLEKLIAWITETFHVTLFICYTSLNYLLLYVSCLDLTLESCSIFQVYA</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="59410" PGL_stop="63069"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="59410" e_stop="59724"/>
            <exon e_start="59915" e_stop="60009"/>
            <exon e_start="60744" e_stop="60861"/>
            <exon e_start="60993" e_stop="61111"/>
            <exon e_start="61790" e_stop="61976"/>
            <exon e_start="62108" e_stop="62251"/>
            <exon e_start="62633" e_stop="63069"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.196" acc_prob="0.971" e_score="1.000"/>
          <exon-intron don_prob="0.978" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.442" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.762" e_score="1.000"/>
          <exon-intron don_prob="0.869" acc_prob="0.974" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.281" e_score="1.000"/>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="59410" e_stop="59724" e_length="315"/>
          </exon>
          <intron i_serial="1" don_prob="0.196" acc_prob="0.971">
            <gDNA_intron_boundary i_start="59725" i_stop="59914" i_length="190"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="59915" e_stop="60009" e_length="95"/>
          </exon>
          <intron i_serial="2" don_prob="0.978" acc_prob="0.000">
            <gDNA_intron_boundary i_start="60010" i_stop="60743" i_length="734"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="60744" e_stop="60861" e_length="118"/>
          </exon>
          <intron i_serial="3" don_prob="0.994" acc_prob="0.442">
            <gDNA_intron_boundary i_start="60862" i_stop="60992" i_length="131"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="60993" e_stop="61111" e_length="119"/>
          </exon>
          <intron i_serial="4" don_prob="0.997" acc_prob="0.762">
            <gDNA_intron_boundary i_start="61112" i_stop="61789" i_length="678"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="61790" e_stop="61976" e_length="187"/>
          </exon>
          <intron i_serial="5" don_prob="0.869" acc_prob="0.974">
            <gDNA_intron_boundary i_start="61977" i_stop="62107" i_length="131"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="62108" e_stop="62251" e_length="144"/>
          </exon>
          <intron i_serial="6" don_prob="1.000" acc_prob="0.281">
            <gDNA_intron_boundary i_start="62252" i_stop="62632" i_length="381"/>
          </intron>
          <exon e_serial="7" e_score="0.995">
            <gDNA_exon_boundary e_start="62633" e_stop="63069" e_length="437"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59410" stop="59724"/>
              <exon start="59915" stop="60009"/>
              <exon start="60744" stop="60861"/>
              <exon start="60993" stop="61111"/>
              <exon start="61790" stop="61976"/>
              <exon start="62108" stop="62251"/>
              <exon start="62633" stop="63069"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E745416" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59426" stop="59724"/>
              <exon start="59915" stop="60009"/>
              <exon start="60744" stop="60792"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E280018" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59427" stop="59724"/>
              <exon start="59915" stop="59997"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E254139" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59428" stop="59724"/>
              <exon start="59915" stop="60009"/>
              <exon start="60744" stop="60861"/>
              <exon start="60993" stop="61006"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E214601" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59431" stop="59724"/>
              <exon start="59915" stop="60009"/>
              <exon start="60744" stop="60861"/>
              <exon start="60993" stop="61111"/>
              <exon start="61790" stop="61976"/>
              <exon start="62108" stop="62156"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E708760" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59433" stop="59724"/>
              <exon start="59915" stop="60009"/>
              <exon start="60744" stop="60861"/>
              <exon start="60993" stop="61111"/>
              <exon start="61790" stop="61976"/>
              <exon start="62108" stop="62215"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E740139" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59433" stop="59724"/>
              <exon start="59915" stop="60009"/>
              <exon start="60744" stop="60861"/>
              <exon start="60993" stop="61111"/>
              <exon start="61790" stop="61976"/>
              <exon start="62108" stop="62177"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E738062" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59433" stop="59724"/>
              <exon start="59915" stop="60009"/>
              <exon start="60744" stop="60861"/>
              <exon start="60993" stop="61111"/>
              <exon start="61790" stop="61976"/>
              <exon start="62108" stop="62140"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E705560" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59433" stop="59724"/>
              <exon start="59915" stop="60009"/>
              <exon start="60744" stop="60861"/>
              <exon start="60993" stop="61111"/>
              <exon start="61790" stop="61966"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E705342" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59434" stop="59724"/>
              <exon start="59915" stop="60009"/>
              <exon start="60744" stop="60861"/>
              <exon start="60993" stop="61111"/>
              <exon start="61790" stop="61890"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E346201" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59434" stop="59724"/>
              <exon start="59915" stop="60009"/>
              <exon start="60744" stop="60861"/>
              <exon start="60993" stop="61082"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E346888" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59434" stop="59724"/>
              <exon start="59915" stop="60009"/>
              <exon start="60744" stop="60861"/>
              <exon start="60993" stop="61006"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E248610" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59434" stop="59724"/>
              <exon start="59915" stop="60009"/>
              <exon start="60744" stop="60799"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E367556" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59436" stop="59724"/>
              <exon start="59915" stop="60009"/>
              <exon start="60744" stop="60813"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E209113" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59438" stop="59724"/>
              <exon start="59915" stop="60009"/>
              <exon start="60744" stop="60861"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E286716" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59438" stop="59724"/>
              <exon start="59915" stop="60009"/>
              <exon start="60744" stop="60861"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331630" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59441" stop="59724"/>
              <exon start="59915" stop="60008"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244634" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59442" stop="59711"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E201024" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59454" stop="59724"/>
              <exon start="59915" stop="60009"/>
              <exon start="60744" stop="60838"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266286" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59454" stop="59724"/>
              <exon start="59915" stop="60009"/>
              <exon start="60744" stop="60805"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E209145" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59457" stop="59724"/>
              <exon start="59915" stop="60009"/>
              <exon start="60744" stop="60761"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293377" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59466" stop="59724"/>
              <exon start="59915" stop="60009"/>
              <exon start="60744" stop="60861"/>
              <exon start="60993" stop="61111"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E273152" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59466" stop="59724"/>
              <exon start="59915" stop="60009"/>
              <exon start="60744" stop="60827"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E272824" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59481" stop="59724"/>
              <exon start="59915" stop="60009"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E367453" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59516" stop="59724"/>
              <exon start="59915" stop="60009"/>
              <exon start="60744" stop="60861"/>
              <exon start="60993" stop="61111"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E291782" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59543" stop="59724"/>
              <exon start="59915" stop="60009"/>
              <exon start="60744" stop="60861"/>
              <exon start="60993" stop="61111"/>
              <exon start="61790" stop="61921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E321660" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60838" stop="60861"/>
              <exon start="60993" stop="61111"/>
              <exon start="61790" stop="61976"/>
              <exon start="62108" stop="62204"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293349" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60849" stop="60861"/>
              <exon start="60993" stop="61111"/>
              <exon start="61790" stop="61976"/>
              <exon start="62108" stop="62251"/>
              <exon start="62633" stop="62994"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E538188" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61043" stop="61111"/>
              <exon start="61790" stop="61976"/>
              <exon start="62108" stop="62251"/>
              <exon start="62633" stop="62778"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319590" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61078" stop="61111"/>
              <exon start="61790" stop="61976"/>
              <exon start="62108" stop="62198"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228387" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61890" stop="61976"/>
              <exon start="62108" stop="62251"/>
              <exon start="62633" stop="63060"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E538185" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62653" stop="63001"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E379407" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGGGTACTAACAGGAAGAAGCGTCCCAATTCCATCCGCCATGGCAACGGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCAT : CAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAAC : GTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAAATCAAAGAGACCAACATGTTTACCGTCGACAAATATCAACAG : ATTGGCTTCTTCCCCAAGGAAAAGGCATACGCACTAAGATATCAGACTGCTGGCATGTTGGAGACTGTGTTAAGACAGGGAGTGCTAGGTGAAGATGATATCGGAGAAGAATCACCAAG : AAATCTGAAGCTTCCCTCTAAACGTCCTTCTATTGTATGTGAAAATTGTCTTTATTCACTGGAGAAAGATAGGCGAGTGAGAGCATTTCATATAATGGACCCAAAAGGAGTACTGGAAATGCTTCTTGTTTTCCTTGAAGAAAGAGGGAACGGAGAGGCCATTCCTCCCTCCTTTGACGATTTCAAG : GAGGATACTGAAAGAATTCTGCCTCATCTTGGAACTTGGAAAGGTCATTCGCGAACAACACGTACTGGTGTTTATGGAGCAACAATTACTGAAGCAAGTACAACTGCTGTTCTTGAAATCAACAAGGACGGCCAGCTAATTCAG : GATATCACGTCTACTTCTGGTGCGACTAATATTACAACAAATGTACATTGGACCGGTACCATATCCAATAACCTAGTGACATTCGACGGTGGTTTCCAGCTTACTCTGTTGCCTGGGGGCATTTACATGGGATACCCATCTGATGTGGCCAAGAATGTGCAAGAATCCACAGCATTTCACGTTGAGTTTTGTTGGCTAGAATCGCCTGGCAAGAGACAAAGACTTATCCGTACTTACGATGTAGAGGGCTTTGCTGTTTCATCTACTTATTTCATCGAGTCCAAGGTCTGAGTTATTTCCCCTGATTCAAAAAGATGTGCTTCAGACATCATATTTGCTCCCGCATGAACCATTTTTCCTGGGTACAATCACCAACACTGTAGTATCAATTGTATCTATCTATCTATATATCTGTTTTTATATATAGAATAATTGTG</gDNA_template>
            <first_frame> W  V  L  T  G  R  S  V  P  I  P  S  A  M  A  T  A  P  A  I  F  V  P  S  T  S  L  A  S  S  N  A  R  K  I  N  L  S  S  W  N  E  K  L  V  I  P  Q  N  F  P  F  W  T  P  K  Y  Q  S  R  K  P  P  S  C  S  G  T  N  V  T  V  V  Q  G  D  R  N  T  T  E  L  P  M  S  I  D  A  L  D  S  F  I  R  L  N  L  G  N  W  T  G  S  F  H  :  Q  F  D  G  H  G  N  L  M  H  R  I  T  T  K  L  A  V  G  S  Y  G  E  G  E  L  M  S  L  L  Q  T :   L  Y  I  K  Q  P  P  S  T  T  S  C  S  G  D  D  C  E  S  E  W  F  E  Y  K  I  K  E  T  N  M  F  T  V  D  K  Y  Q  Q  :  I  G  F  F  P  K  E  K  A  Y  A  L  R  Y  Q  T  A  G  M  L  E  T  V  L  R  Q  G  V  L  G  E  D  D  I  G  E  E  S  P  R :   N  L  K  L  P  S  K  R  P  S  I  V  C  E  N  C  L  Y  S  L  E  K  D  R  R  V  R  A  F  H  I  M  D  P  K  G  V  L  E  M  L  L  V  F  L  E  E  R  G  N  G  E  A  I  P  P  S  F  D  D  F  K  :  E  D  T  E  R  I  L  P  H  L  G  T  W  K  G  H  S  R  T  T  R  T  G  V  Y  G  A  T  I  T  E  A  S  T  T  A  V  L  E  I  N  K  D  G  Q  L  I  Q  :  D  I  T  S  T  S  G  A  T  N  I  T  T  N  V  H  W  T  G  T  I  S  N  N  L  V  T  F  D  G  G  F  Q  L  T  L  L  P  G  G  I  Y  M  G  Y  P  S  D  V  A  K  N  V  Q  E  S  T  A  F  H  V  E  F  C  W  L  E  S  P  G  K  R  Q  R  L  I  R  T  Y  D  V  E  G  F  A  V  S  S  T  Y  F  I  E  S  K  V  *  V  I  S  P  D  S  K  R  C  A  S  D  I  I  F  A  P  A  *  T  I  F  P  G  Y  N  H  Q  H  C  S  I  N  C  I  Y  L  S  I  Y  L  F  L  Y  I  E  *  L   </first_frame>
            <second_frame>  G  Y  *  Q  E  E  A  S  Q  F  H  P  P  W  Q  R  R  Q  P  F  L  C  L  P  L  L  S  L  P  P  M  H  A  R  L  I  *  V  H  G  T  R  N  W  L  Y  P  K  I  F  H  S  G  L  P  S  T  S  L  G  N  H  R  H  A  P  V  P  M  S  R  W  S  K  V  I  G  I  Q  P  N  Y  Q  *  V  L  T  L  L  T  V  S  F  A  L  I  W  E  T  G  P  A  L  S  I :   N  L  M  V  M  E  I  *  C  I  E  L  Q  R  N  L  L  W  A  L  M  V  K  V  N  *  *  V  Y  Y  K   : R  Y  T  S  N  N  L  H  L  P  L  H  V  L  A  M  I  V  S  Q  S  G  L  S  T  K  S  K  R  P  T  C  L  P  S  T  N  I  N  R :   L  A  S  S  P  R  K  R  H  T  H  *  D  I  R  L  L  A  C  W  R  L  C  *  D  R  E  C  *  V  K  M  I  S  E  K  N  H  Q   : E  I  *  S  F  P  L  N  V  L  L  L  Y  V  K  I  V  F  I  H  W  R  K  I  G  E  *  E  H  F  I  *  W  T  Q  K  E  Y  W  K  C  F  L  F  S  L  K  K  E  G  T  E  R  P  F  L  P  P  L  T  I  S  R :   R  I  L  K  E  F  C  L  I  L  E  L  G  K  V  I  R  E  Q  H  V  L  V  F  M  E  Q  Q  L  L  K  Q  V  Q  L  L  F  L  K  S  T  R  T  A  S  *  F  R :   I  S  R  L  L  L  V  R  L  I  L  Q  Q  M  Y  I  G  P  V  P  Y  P  I  T  *  *  H  S  T  V  V  S  S  L  L  C  C  L  G  A  F  T  W  D  T  H  L  M  W  P  R  M  C  K  N  P  Q  H  F  T  L  S  F  V  G  *  N  R  L  A  R  D  K  D  L  S  V  L  T  M  *  R  A  L  L  F  H  L  L  I  S  S  S  P  R  S  E  L  F  P  L  I  Q  K  D  V  L  Q  T  S  Y  L  L  P  H  E  P  F  F  L  G  T  I  T  N  T  V  V  S  I  V  S  I  Y  L  Y  I  C  F  Y  I  *  N  N  C  </second_frame>
            <third_frame>   G  T  N  R  K  K  R  P  N  S  I  R  H  G  N  G  A  S  H  F  C  A  F  H  F  S  R  F  L  Q  C  T  Q  D  *  S  K  F  M  E  R  E  T  G  Y  T  P  K  F  S  I  L  D  S  Q  V  P  V  *  E  T  T  V  M  L  R  Y  Q  C  H  G  G  P  R  *  S  E  Y  N  R  T  T  N  E  Y  *  R  S  *  Q  F  H  S  P  *  F  G  K  L  D  R  L  F  P   : S  I  *  W  S  W  K  F  D  A  *  N  Y  N  E  T  C  C  G  L  L  W  *  R  *  T  D  E  F  I  T  N  :  V  I  H  Q  T  T  S  I  Y  H  F  M  F  W  R  *  L  *  V  R  V  V  *  V  Q  N  Q  R  D  Q  H  V  Y  R  R  Q  I  S  T   : D  W  L  L  P  Q  G  K  G  I  R  T  K  I  S  D  C  W  H  V  G  D  C  V  K  T  G  S  A  R  *  R  *  Y  R  R  R  I  T  K  :  K  S  E  A  S  L  *  T  S  F  Y  C  M  *  K  L  S  L  F  T  G  E  R  *  A  S  E  S  I  S  Y  N  G  P  K  R  S  T  G  N  A  S  C  F  P  *  R  K  R  E  R  R  G  H  S  S  L  L  *  R  F  Q   : G  G  Y  *  K  N  S  A  S  S  W  N  L  E  R  S  F  A  N  N  T  Y  W  C  L  W  S  N  N  Y  *  S  K  Y  N  C  C  S  *  N  Q  Q  G  R  P  A  N  S   : G  Y  H  V  Y  F  W  C  D  *  Y  Y  N  K  C  T  L  D  R  Y  H  I  Q  *  P  S  D  I  R  R  W  F  P  A  Y  S  V  A  W  G  H  L  H  G  I  P  I  *  C  G  Q  E  C  A  R  I  H  S  I  S  R  *  V  L  L  A  R  I  A  W  Q  E  T  K  T  Y  P  Y  L  R  C  R  G  L  C  C  F  I  Y  L  F  H  R  V  Q  G  L  S  Y  F  P  *  F  K  K  M  C  F  R  H  H  I  C  S  R  M  N  H  F  S  W  V  Q  S  P  T  L  *  Y  Q  L  Y  L  S  I  Y  I  S  V  F  I  Y  R  I  I  V </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0042B19.2" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="59410" stop="59724"/>
                    <exon start="59915" stop="60009"/>
                    <exon start="60744" stop="60861"/>
                    <exon start="60993" stop="61111"/>
                    <exon start="61790" stop="61976"/>
                    <exon start="62108" stop="62251"/>
                    <exon start="62633" stop="62923"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1266</number_coding_nucleotides>
                  <number_encoded_amino_acids>422</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>WVLTGRSVPIPSAMATAPAIFVPSTSLASSNARKINLSSWNEKLVIPQNFPFWTPKYQSRKPPSCSGTNVTVVQGDRNTTELPMSIDALDSFIRLNLGNWTGSFHQFDGHGNLMHRITTKLAVGSYGEGELMSLLQTLYIKQPPSTTSCSGDDCESEWFEYKIKETNMFTVDKYQQIGFFPKEKAYALRYQTAGMLETVLRQGVLGEDDIGEESPRNLKLPSKRPSIVCENCLYSLEKDRRVRAFHIMDPKGVLEMLLVFLEERGNGEAIPPSFDDFKEDTERILPHLGTWKGHSRTTRTGVYGATITEASTTAVLEINKDGQLIQDITSTSGATNITTNVHWTGTISNNLVTFDGGFQLTLLPGGIYMGYPSDVAKNVQESTAFHVEFCWLESPGKRQRLIRTYDVEGFAVSSTYFIESKV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="59426" e_stop="59724"/>
            <exon e_start="59915" e_stop="60009"/>
            <exon e_start="60744" e_stop="60861"/>
            <exon e_start="60936" e_stop="61111"/>
            <exon e_start="61790" e_stop="61976"/>
            <exon e_start="62108" e_stop="62251"/>
            <exon e_start="62633" e_stop="63060"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.196" acc_prob="0.971" e_score="1.000"/>
          <exon-intron don_prob="0.978" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.762" e_score="1.000"/>
          <exon-intron don_prob="0.869" acc_prob="0.974" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.281" e_score="1.000"/>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="59426" e_stop="59724" e_length="299"/>
          </exon>
          <intron i_serial="1" don_prob="0.196" acc_prob="0.971">
            <gDNA_intron_boundary i_start="59725" i_stop="59914" i_length="190"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="59915" e_stop="60009" e_length="95"/>
          </exon>
          <intron i_serial="2" don_prob="0.978" acc_prob="0.000">
            <gDNA_intron_boundary i_start="60010" i_stop="60743" i_length="734"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="60744" e_stop="60861" e_length="118"/>
          </exon>
          <intron i_serial="3" don_prob="0.994" acc_prob="0.000">
            <gDNA_intron_boundary i_start="60862" i_stop="60935" i_length="74"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="60936" e_stop="61111" e_length="176"/>
          </exon>
          <intron i_serial="4" don_prob="0.997" acc_prob="0.762">
            <gDNA_intron_boundary i_start="61112" i_stop="61789" i_length="678"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="61790" e_stop="61976" e_length="187"/>
          </exon>
          <intron i_serial="5" don_prob="0.869" acc_prob="0.974">
            <gDNA_intron_boundary i_start="61977" i_stop="62107" i_length="131"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="62108" e_stop="62251" e_length="144"/>
          </exon>
          <intron i_serial="6" don_prob="1.000" acc_prob="0.281">
            <gDNA_intron_boundary i_start="62252" i_stop="62632" i_length="381"/>
          </intron>
          <exon e_serial="7" e_score="0.995">
            <gDNA_exon_boundary e_start="62633" e_stop="63060" e_length="428"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59426" stop="59724"/>
              <exon start="59915" stop="60009"/>
              <exon start="60744" stop="60792"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E280018" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59427" stop="59724"/>
              <exon start="59915" stop="59997"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E254139" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59434" stop="59724"/>
              <exon start="59915" stop="60009"/>
              <exon start="60744" stop="60799"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E367556" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59436" stop="59724"/>
              <exon start="59915" stop="60009"/>
              <exon start="60744" stop="60813"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E209113" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59438" stop="59724"/>
              <exon start="59915" stop="60009"/>
              <exon start="60744" stop="60861"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E286716" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59438" stop="59724"/>
              <exon start="59915" stop="60009"/>
              <exon start="60744" stop="60861"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331630" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59441" stop="59724"/>
              <exon start="59915" stop="60008"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244634" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59442" stop="59711"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E201024" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59454" stop="59724"/>
              <exon start="59915" stop="60009"/>
              <exon start="60744" stop="60838"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266286" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59454" stop="59724"/>
              <exon start="59915" stop="60009"/>
              <exon start="60744" stop="60805"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E209145" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59457" stop="59724"/>
              <exon start="59915" stop="60009"/>
              <exon start="60744" stop="60761"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293377" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59466" stop="59724"/>
              <exon start="59915" stop="60009"/>
              <exon start="60744" stop="60827"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E272824" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59481" stop="59724"/>
              <exon start="59915" stop="60009"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E367453" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59592" stop="59724"/>
              <exon start="59915" stop="60009"/>
              <exon start="60744" stop="60861"/>
              <exon start="60936" stop="61111"/>
              <exon start="61790" stop="61976"/>
              <exon start="62108" stop="62136"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E320123" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59592" stop="59724"/>
              <exon start="59915" stop="60009"/>
              <exon start="60744" stop="60861"/>
              <exon start="60936" stop="61111"/>
              <exon start="61790" stop="61925"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E322109" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59592" stop="59724"/>
              <exon start="59915" stop="60009"/>
              <exon start="60744" stop="60861"/>
              <exon start="60936" stop="61111"/>
              <exon start="61790" stop="61890"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E322233" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60943" stop="61111"/>
              <exon start="61790" stop="61976"/>
              <exon start="62108" stop="62169"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E209186" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61043" stop="61111"/>
              <exon start="61790" stop="61976"/>
              <exon start="62108" stop="62251"/>
              <exon start="62633" stop="62778"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319590" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61078" stop="61111"/>
              <exon start="61790" stop="61976"/>
              <exon start="62108" stop="62198"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228387" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61890" stop="61976"/>
              <exon start="62108" stop="62251"/>
              <exon start="62633" stop="63060"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E538185" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62653" stop="63001"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E379407" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAAGCGTCCCAATTCCATCCGCCATGGCAACGGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCAT : CAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAAC : GTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAAATCAAAGAGACCAACATGTTTACCGTCGACAAATATCAACAG : TTTCTGTTTCTTTTCAGATTTTATTGCATTTGAGGTACCACTAAAAGTAGTTTGCAGATTGGCTTCTTCCCCAAGGAAAAGGCATACGCACTAAGATATCAGACTGCTGGCATGTTGGAGACTGTGTTAAGACAGGGAGTGCTAGGTGAAGATGATATCGGAGAAGAATCACCAAG : AAATCTGAAGCTTCCCTCTAAACGTCCTTCTATTGTATGTGAAAATTGTCTTTATTCACTGGAGAAAGATAGGCGAGTGAGAGCATTTCATATAATGGACCCAAAAGGAGTACTGGAAATGCTTCTTGTTTTCCTTGAAGAAAGAGGGAACGGAGAGGCCATTCCTCCCTCCTTTGACGATTTCAAG : GAGGATACTGAAAGAATTCTGCCTCATCTTGGAACTTGGAAAGGTCATTCGCGAACAACACGTACTGGTGTTTATGGAGCAACAATTACTGAAGCAAGTACAACTGCTGTTCTTGAAATCAACAAGGACGGCCAGCTAATTCAG : GATATCACGTCTACTTCTGGTGCGACTAATATTACAACAAATGTACATTGGACCGGTACCATATCCAATAACCTAGTGACATTCGACGGTGGTTTCCAGCTTACTCTGTTGCCTGGGGGCATTTACATGGGATACCCATCTGATGTGGCCAAGAATGTGCAAGAATCCACAGCATTTCACGTTGAGTTTTGTTGGCTAGAATCGCCTGGCAAGAGACAAAGACTTATCCGTACTTACGATGTAGAGGGCTTTGCTGTTTCATCTACTTATTTCATCGAGTCCAAGGTCTGAGTTATTTCCCCTGATTCAAAAAGATGTGCTTCAGACATCATATTTGCTCCCGCATGAACCATTTTTCCTGGGTACAATCACCAACACTGTAGTATCAATTGTATCTATCTATCTATATATCTGTTTTTATATATAGA</gDNA_template>
            <first_frame> E  A  S  Q  F  H  P  P  W  Q  R  R  Q  P  F  L  C  L  P  L  L  S  L  P  P  M  H  A  R  L  I  *  V  H  G  T  R  N  W  L  Y  P  K  I  F  H  S  G  L  P  S  T  S  L  G  N  H  R  H  A  P  V  P  M  S  R  W  S  K  V  I  G  I  Q  P  N  Y  Q  *  V  L  T  L  L  T  V  S  F  A  L  I  W  E  T  G  P  A  L  S  I :   N  L  M  V  M  E  I  *  C  I  E  L  Q  R  N  L  L  W  A  L  M  V  K  V  N  *  *  V  Y  Y  K   : R  Y  T  S  N  N  L  H  L  P  L  H  V  L  A  M  I  V  S  Q  S  G  L  S  T  K  S  K  R  P  T  C  L  P  S  T  N  I  N  S :   F  C  F  F  S  D  F  I  A  F  E  V  P  L  K  V  V  C  R  L  A  S  S  P  R  K  R  H  T  H  *  D  I  R  L  L  A  C  W  R  L  C  *  D  R  E  C  *  V  K  M  I  S  E  K  N  H  Q   : E  I  *  S  F  P  L  N  V  L  L  L  Y  V  K  I  V  F  I  H  W  R  K  I  G  E  *  E  H  F  I  *  W  T  Q  K  E  Y  W  K  C  F  L  F  S  L  K  K  E  G  T  E  R  P  F  L  P  P  L  T  I  S  R :   R  I  L  K  E  F  C  L  I  L  E  L  G  K  V  I  R  E  Q  H  V  L  V  F  M  E  Q  Q  L  L  K  Q  V  Q  L  L  F  L  K  S  T  R  T  A  S  *  F  R :   I  S  R  L  L  L  V  R  L  I  L  Q  Q  M  Y  I  G  P  V  P  Y  P  I  T  *  *  H  S  T  V  V  S  S  L  L  C  C  L  G  A  F  T  W  D  T  H  L  M  W  P  R  M  C  K  N  P  Q  H  F  T  L  S  F  V  G  *  N  R  L  A  R  D  K  D  L  S  V  L  T  M  *  R  A  L  L  F  H  L  L  I  S  S  S  P  R  S  E  L  F  P  L  I  Q  K  D  V  L  Q  T  S  Y  L  L  P  H  E  P  F  F  L  G  T  I  T  N  T  V  V  S  I  V  S  I  Y  L  Y  I  C  F  Y  I  *  </first_frame>
            <second_frame>  K  R  P  N  S  I  R  H  G  N  G  A  S  H  F  C  A  F  H  F  S  R  F  L  Q  C  T  Q  D  *  S  K  F  M  E  R  E  T  G  Y  T  P  K  F  S  I  L  D  S  Q  V  P  V  *  E  T  T  V  M  L  R  Y  Q  C  H  G  G  P  R  *  S  E  Y  N  R  T  T  N  E  Y  *  R  S  *  Q  F  H  S  P  *  F  G  K  L  D  R  L  F  P   : S  I  *  W  S  W  K  F  D  A  *  N  Y  N  E  T  C  C  G  L  L  W  *  R  *  T  D  E  F  I  T  N  :  V  I  H  Q  T  T  S  I  Y  H  F  M  F  W  R  *  L  *  V  R  V  V  *  V  Q  N  Q  R  D  Q  H  V  Y  R  R  Q  I  S  T   : V  S  V  S  F  Q  I  L  L  H  L  R  Y  H  *  K  *  F  A  D  W  L  L  P  Q  G  K  G  I  R  T  K  I  S  D  C  W  H  V  G  D  C  V  K  T  G  S  A  R  *  R  *  Y  R  R  R  I  T  K  :  K  S  E  A  S  L  *  T  S  F  Y  C  M  *  K  L  S  L  F  T  G  E  R  *  A  S  E  S  I  S  Y  N  G  P  K  R  S  T  G  N  A  S  C  F  P  *  R  K  R  E  R  R  G  H  S  S  L  L  *  R  F  Q   : G  G  Y  *  K  N  S  A  S  S  W  N  L  E  R  S  F  A  N  N  T  Y  W  C  L  W  S  N  N  Y  *  S  K  Y  N  C  C  S  *  N  Q  Q  G  R  P  A  N  S   : G  Y  H  V  Y  F  W  C  D  *  Y  Y  N  K  C  T  L  D  R  Y  H  I  Q  *  P  S  D  I  R  R  W  F  P  A  Y  S  V  A  W  G  H  L  H  G  I  P  I  *  C  G  Q  E  C  A  R  I  H  S  I  S  R  *  V  L  L  A  R  I  A  W  Q  E  T  K  T  Y  P  Y  L  R  C  R  G  L  C  C  F  I  Y  L  F  H  R  V  Q  G  L  S  Y  F  P  *  F  K  K  M  C  F  R  H  H  I  C  S  R  M  N  H  F  S  W  V  Q  S  P  T  L  *  Y  Q  L  Y  L  S  I  Y  I  S  V  F  I  Y  R </second_frame>
            <third_frame>   S  V  P  I  P  S  A  M  A  T  A  P  A  I  F  V  P  S  T  S  L  A  S  S  N  A  R  K  I  N  L  S  S  W  N  E  K  L  V  I  P  Q  N  F  P  F  W  T  P  K  Y  Q  S  R  K  P  P  S  C  S  G  T  N  V  T  V  V  Q  G  D  R  N  T  T  E  L  P  M  S  I  D  A  L  D  S  F  I  R  L  N  L  G  N  W  T  G  S  F  H  :  Q  F  D  G  H  G  N  L  M  H  R  I  T  T  K  L  A  V  G  S  Y  G  E  G  E  L  M  S  L  L  Q  T :   L  Y  I  K  Q  P  P  S  T  T  S  C  S  G  D  D  C  E  S  E  W  F  E  Y  K  I  K  E  T  N  M  F  T  V  D  K  Y  Q  Q  :  F  L  F  L  F  R  F  Y  C  I  *  G  T  T  K  S  S  L  Q  I  G  F  F  P  K  E  K  A  Y  A  L  R  Y  Q  T  A  G  M  L  E  T  V  L  R  Q  G  V  L  G  E  D  D  I  G  E  E  S  P  R :   N  L  K  L  P  S  K  R  P  S  I  V  C  E  N  C  L  Y  S  L  E  K  D  R  R  V  R  A  F  H  I  M  D  P  K  G  V  L  E  M  L  L  V  F  L  E  E  R  G  N  G  E  A  I  P  P  S  F  D  D  F  K  :  E  D  T  E  R  I  L  P  H  L  G  T  W  K  G  H  S  R  T  T  R  T  G  V  Y  G  A  T  I  T  E  A  S  T  T  A  V  L  E  I  N  K  D  G  Q  L  I  Q  :  D  I  T  S  T  S  G  A  T  N  I  T  T  N  V  H  W  T  G  T  I  S  N  N  L  V  T  F  D  G  G  F  Q  L  T  L  L  P  G  G  I  Y  M  G  Y  P  S  D  V  A  K  N  V  Q  E  S  T  A  F  H  V  E  F  C  W  L  E  S  P  G  K  R  Q  R  L  I  R  T  Y  D  V  E  G  F  A  V  S  S  T  Y  F  I  E  S  K  V  *  V  I  S  P  D  S  K  R  C  A  S  D  I  I  F  A  P  A  *  T  I  F  P  G  Y  N  H  Q  H  C  S  I  N  C  I  Y  L  S  I  Y  L  F  L  Y  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0042B19.2" strand="+"/>
                <serials PGL_serial="4" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="60969" stop="61111"/>
                    <exon start="61790" stop="61976"/>
                    <exon start="62108" stop="62251"/>
                    <exon start="62633" stop="62923"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>762</number_coding_nucleotides>
                  <number_encoded_amino_acids>254</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GTTKSSLQIGFFPKEKAYALRYQTAGMLETVLRQGVLGEDDIGEESPRNLKLPSKRPSIVCENCLYSLEKDRRVRAFHIMDPKGVLEMLLVFLEERGNGEAIPPSFDDFKEDTERILPHLGTWKGHSRTTRTGVYGATITEASTTAVLEINKDGQLIQDITSTSGATNITTNVHWTGTISNNLVTFDGGFQLTLLPGGIYMGYPSDVAKNVQESTAFHVEFCWLESPGKRQRLIRTYDVEGFAVSSTYFIESKV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0042B19.2" strand="+"/>
                <serials PGL_serial="4" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="59428" stop="59724"/>
                    <exon start="59915" stop="60009"/>
                    <exon start="60744" stop="60861"/>
                    <exon start="60936" stop="60968"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>540</number_coding_nucleotides>
                  <number_encoded_amino_acids>180</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SVPIPSAMATAPAIFVPSTSLASSNARKINLSSWNEKLVIPQNFPFWTPKYQSRKPPSCSGTNVTVVQGDRNTTELPMSIDALDSFIRLNLGNWTGSFHQFDGHGNLMHRITTKLAVGSYGEGELMSLLQTLYIKQPPSTTSCSGDDCESEWFEYKIKETNMFTVDKYQQFLFLFRFYCI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="59426" e_stop="59724"/>
            <exon e_start="59915" e_stop="60009"/>
            <exon e_start="60744" e_stop="60861"/>
            <exon e_start="60953" e_stop="61111"/>
            <exon e_start="61790" e_stop="61976"/>
            <exon e_start="62108" e_stop="62251"/>
            <exon e_start="62633" e_stop="63060"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.196" acc_prob="0.971" e_score="1.000"/>
          <exon-intron don_prob="0.978" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.599" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.762" e_score="0.994"/>
          <exon-intron don_prob="0.869" acc_prob="0.974" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.281" e_score="1.000"/>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="59426" e_stop="59724" e_length="299"/>
          </exon>
          <intron i_serial="1" don_prob="0.196" acc_prob="0.971">
            <gDNA_intron_boundary i_start="59725" i_stop="59914" i_length="190"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="59915" e_stop="60009" e_length="95"/>
          </exon>
          <intron i_serial="2" don_prob="0.978" acc_prob="0.000">
            <gDNA_intron_boundary i_start="60010" i_stop="60743" i_length="734"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="60744" e_stop="60861" e_length="118"/>
          </exon>
          <intron i_serial="3" don_prob="0.994" acc_prob="0.599">
            <gDNA_intron_boundary i_start="60862" i_stop="60952" i_length="91"/>
          </intron>
          <exon e_serial="4" e_score="0.994">
            <gDNA_exon_boundary e_start="60953" e_stop="61111" e_length="159"/>
          </exon>
          <intron i_serial="4" don_prob="0.997" acc_prob="0.762">
            <gDNA_intron_boundary i_start="61112" i_stop="61789" i_length="678"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="61790" e_stop="61976" e_length="187"/>
          </exon>
          <intron i_serial="5" don_prob="0.869" acc_prob="0.974">
            <gDNA_intron_boundary i_start="61977" i_stop="62107" i_length="131"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="62108" e_stop="62251" e_length="144"/>
          </exon>
          <intron i_serial="6" don_prob="1.000" acc_prob="0.281">
            <gDNA_intron_boundary i_start="62252" i_stop="62632" i_length="381"/>
          </intron>
          <exon e_serial="7" e_score="0.995">
            <gDNA_exon_boundary e_start="62633" e_stop="63060" e_length="428"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59426" stop="59724"/>
              <exon start="59915" stop="60009"/>
              <exon start="60744" stop="60792"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E280018" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59427" stop="59724"/>
              <exon start="59915" stop="59997"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E254139" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59434" stop="59724"/>
              <exon start="59915" stop="60009"/>
              <exon start="60744" stop="60861"/>
              <exon start="60953" stop="61111"/>
              <exon start="61790" stop="61823"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E314943" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59434" stop="59724"/>
              <exon start="59915" stop="60009"/>
              <exon start="60744" stop="60799"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E367556" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59436" stop="59724"/>
              <exon start="59915" stop="60009"/>
              <exon start="60744" stop="60813"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E209113" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59438" stop="59724"/>
              <exon start="59915" stop="60009"/>
              <exon start="60744" stop="60861"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E286716" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59438" stop="59724"/>
              <exon start="59915" stop="60009"/>
              <exon start="60744" stop="60861"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331630" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59441" stop="59724"/>
              <exon start="59915" stop="60008"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244634" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59442" stop="59711"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E201024" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59454" stop="59724"/>
              <exon start="59915" stop="60009"/>
              <exon start="60744" stop="60838"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266286" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59454" stop="59724"/>
              <exon start="59915" stop="60009"/>
              <exon start="60744" stop="60805"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E209145" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59457" stop="59724"/>
              <exon start="59915" stop="60009"/>
              <exon start="60744" stop="60761"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293377" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59466" stop="59724"/>
              <exon start="59915" stop="60009"/>
              <exon start="60744" stop="60827"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E272824" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59481" stop="59724"/>
              <exon start="59915" stop="60009"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E367453" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61043" stop="61111"/>
              <exon start="61790" stop="61976"/>
              <exon start="62108" stop="62251"/>
              <exon start="62633" stop="62778"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319590" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61078" stop="61111"/>
              <exon start="61790" stop="61976"/>
              <exon start="62108" stop="62198"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228387" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61890" stop="61976"/>
              <exon start="62108" stop="62251"/>
              <exon start="62633" stop="63060"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E538185" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62653" stop="63001"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E379407" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAAGCGTCCCAATTCCATCCGCCATGGCAACGGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCAT : CAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAAC : GTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAAATCAAAGAGACCAACATGTTTACCGTCGACAAATATCAACAG : ATTTTATTGCATTTGAGGTACCACTAAAAGTAGTTTGCAGATTGGCTTCTTCCCCAAGGAAAAGGCATACGCACTAAGATATCAGACTGCTGGCATGTTGGAGACTGTGTTAAGACAGGGAGTGCTAGGTGAAGATGATATCGGAGAAGAATCACCAAG : AAATCTGAAGCTTCCCTCTAAACGTCCTTCTATTGTATGTGAAAATTGTCTTTATTCACTGGAGAAAGATAGGCGAGTGAGAGCATTTCATATAATGGACCCAAAAGGAGTACTGGAAATGCTTCTTGTTTTCCTTGAAGAAAGAGGGAACGGAGAGGCCATTCCTCCCTCCTTTGACGATTTCAAG : GAGGATACTGAAAGAATTCTGCCTCATCTTGGAACTTGGAAAGGTCATTCGCGAACAACACGTACTGGTGTTTATGGAGCAACAATTACTGAAGCAAGTACAACTGCTGTTCTTGAAATCAACAAGGACGGCCAGCTAATTCAG : GATATCACGTCTACTTCTGGTGCGACTAATATTACAACAAATGTACATTGGACCGGTACCATATCCAATAACCTAGTGACATTCGACGGTGGTTTCCAGCTTACTCTGTTGCCTGGGGGCATTTACATGGGATACCCATCTGATGTGGCCAAGAATGTGCAAGAATCCACAGCATTTCACGTTGAGTTTTGTTGGCTAGAATCGCCTGGCAAGAGACAAAGACTTATCCGTACTTACGATGTAGAGGGCTTTGCTGTTTCATCTACTTATTTCATCGAGTCCAAGGTCTGAGTTATTTCCCCTGATTCAAAAAGATGTGCTTCAGACATCATATTTGCTCCCGCATGAACCATTTTTCCTGGGTACAATCACCAACACTGTAGTATCAATTGTATCTATCTATCTATATATCTGTTTTTATATATAGA</gDNA_template>
            <first_frame> E  A  S  Q  F  H  P  P  W  Q  R  R  Q  P  F  L  C  L  P  L  L  S  L  P  P  M  H  A  R  L  I  *  V  H  G  T  R  N  W  L  Y  P  K  I  F  H  S  G  L  P  S  T  S  L  G  N  H  R  H  A  P  V  P  M  S  R  W  S  K  V  I  G  I  Q  P  N  Y  Q  *  V  L  T  L  L  T  V  S  F  A  L  I  W  E  T  G  P  A  L  S  I :   N  L  M  V  M  E  I  *  C  I  E  L  Q  R  N  L  L  W  A  L  M  V  K  V  N  *  *  V  Y  Y  K   : R  Y  T  S  N  N  L  H  L  P  L  H  V  L  A  M  I  V  S  Q  S  G  L  S  T  K  S  K  R  P  T  C  L  P  S  T  N  I  N  R :   F  Y  C  I  *  G  T  T  K  S  S  L  Q  I  G  F  F  P  K  E  K  A  Y  A  L  R  Y  Q  T  A  G  M  L  E  T  V  L  R  Q  G  V  L  G  E  D  D  I  G  E  E  S  P  R :   N  L  K  L  P  S  K  R  P  S  I  V  C  E  N  C  L  Y  S  L  E  K  D  R  R  V  R  A  F  H  I  M  D  P  K  G  V  L  E  M  L  L  V  F  L  E  E  R  G  N  G  E  A  I  P  P  S  F  D  D  F  K  :  E  D  T  E  R  I  L  P  H  L  G  T  W  K  G  H  S  R  T  T  R  T  G  V  Y  G  A  T  I  T  E  A  S  T  T  A  V  L  E  I  N  K  D  G  Q  L  I  Q  :  D  I  T  S  T  S  G  A  T  N  I  T  T  N  V  H  W  T  G  T  I  S  N  N  L  V  T  F  D  G  G  F  Q  L  T  L  L  P  G  G  I  Y  M  G  Y  P  S  D  V  A  K  N  V  Q  E  S  T  A  F  H  V  E  F  C  W  L  E  S  P  G  K  R  Q  R  L  I  R  T  Y  D  V  E  G  F  A  V  S  S  T  Y  F  I  E  S  K  V  *  V  I  S  P  D  S  K  R  C  A  S  D  I  I  F  A  P  A  *  T  I  F  P  G  Y  N  H  Q  H  C  S  I  N  C  I  Y  L  S  I  Y  L  F  L  Y  I   </first_frame>
            <second_frame>  K  R  P  N  S  I  R  H  G  N  G  A  S  H  F  C  A  F  H  F  S  R  F  L  Q  C  T  Q  D  *  S  K  F  M  E  R  E  T  G  Y  T  P  K  F  S  I  L  D  S  Q  V  P  V  *  E  T  T  V  M  L  R  Y  Q  C  H  G  G  P  R  *  S  E  Y  N  R  T  T  N  E  Y  *  R  S  *  Q  F  H  S  P  *  F  G  K  L  D  R  L  F  P   : S  I  *  W  S  W  K  F  D  A  *  N  Y  N  E  T  C  C  G  L  L  W  *  R  *  T  D  E  F  I  T  N  :  V  I  H  Q  T  T  S  I  Y  H  F  M  F  W  R  *  L  *  V  R  V  V  *  V  Q  N  Q  R  D  Q  H  V  Y  R  R  Q  I  S  T   : D  F  I  A  F  E  V  P  L  K  V  V  C  R  L  A  S  S  P  R  K  R  H  T  H  *  D  I  R  L  L  A  C  W  R  L  C  *  D  R  E  C  *  V  K  M  I  S  E  K  N  H  Q   : E  I  *  S  F  P  L  N  V  L  L  L  Y  V  K  I  V  F  I  H  W  R  K  I  G  E  *  E  H  F  I  *  W  T  Q  K  E  Y  W  K  C  F  L  F  S  L  K  K  E  G  T  E  R  P  F  L  P  P  L  T  I  S  R :   R  I  L  K  E  F  C  L  I  L  E  L  G  K  V  I  R  E  Q  H  V  L  V  F  M  E  Q  Q  L  L  K  Q  V  Q  L  L  F  L  K  S  T  R  T  A  S  *  F  R :   I  S  R  L  L  L  V  R  L  I  L  Q  Q  M  Y  I  G  P  V  P  Y  P  I  T  *  *  H  S  T  V  V  S  S  L  L  C  C  L  G  A  F  T  W  D  T  H  L  M  W  P  R  M  C  K  N  P  Q  H  F  T  L  S  F  V  G  *  N  R  L  A  R  D  K  D  L  S  V  L  T  M  *  R  A  L  L  F  H  L  L  I  S  S  S  P  R  S  E  L  F  P  L  I  Q  K  D  V  L  Q  T  S  Y  L  L  P  H  E  P  F  F  L  G  T  I  T  N  T  V  V  S  I  V  S  I  Y  L  Y  I  C  F  Y  I  *  </second_frame>
            <third_frame>   S  V  P  I  P  S  A  M  A  T  A  P  A  I  F  V  P  S  T  S  L  A  S  S  N  A  R  K  I  N  L  S  S  W  N  E  K  L  V  I  P  Q  N  F  P  F  W  T  P  K  Y  Q  S  R  K  P  P  S  C  S  G  T  N  V  T  V  V  Q  G  D  R  N  T  T  E  L  P  M  S  I  D  A  L  D  S  F  I  R  L  N  L  G  N  W  T  G  S  F  H  :  Q  F  D  G  H  G  N  L  M  H  R  I  T  T  K  L  A  V  G  S  Y  G  E  G  E  L  M  S  L  L  Q  T :   L  Y  I  K  Q  P  P  S  T  T  S  C  S  G  D  D  C  E  S  E  W  F  E  Y  K  I  K  E  T  N  M  F  T  V  D  K  Y  Q  Q  :  I  L  L  H  L  R  Y  H  *  K  *  F  A  D  W  L  L  P  Q  G  K  G  I  R  T  K  I  S  D  C  W  H  V  G  D  C  V  K  T  G  S  A  R  *  R  *  Y  R  R  R  I  T  K  :  K  S  E  A  S  L  *  T  S  F  Y  C  M  *  K  L  S  L  F  T  G  E  R  *  A  S  E  S  I  S  Y  N  G  P  K  R  S  T  G  N  A  S  C  F  P  *  R  K  R  E  R  R  G  H  S  S  L  L  *  R  F  Q   : G  G  Y  *  K  N  S  A  S  S  W  N  L  E  R  S  F  A  N  N  T  Y  W  C  L  W  S  N  N  Y  *  S  K  Y  N  C  C  S  *  N  Q  Q  G  R  P  A  N  S   : G  Y  H  V  Y  F  W  C  D  *  Y  Y  N  K  C  T  L  D  R  Y  H  I  Q  *  P  S  D  I  R  R  W  F  P  A  Y  S  V  A  W  G  H  L  H  G  I  P  I  *  C  G  Q  E  C  A  R  I  H  S  I  S  R  *  V  L  L  A  R  I  A  W  Q  E  T  K  T  Y  P  Y  L  R  C  R  G  L  C  C  F  I  Y  L  F  H  R  V  Q  G  L  S  Y  F  P  *  F  K  K  M  C  F  R  H  H  I  C  S  R  M  N  H  F  S  W  V  Q  S  P  T  L  *  Y  Q  L  Y  L  S  I  Y  I  S  V  F  I  Y  R </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0042B19.2" strand="+"/>
                <serials PGL_serial="4" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="60969" stop="61111"/>
                    <exon start="61790" stop="61976"/>
                    <exon start="62108" stop="62251"/>
                    <exon start="62633" stop="62923"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>762</number_coding_nucleotides>
                  <number_encoded_amino_acids>254</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GTTKSSLQIGFFPKEKAYALRYQTAGMLETVLRQGVLGEDDIGEESPRNLKLPSKRPSIVCENCLYSLEKDRRVRAFHIMDPKGVLEMLLVFLEERGNGEAIPPSFDDFKEDTERILPHLGTWKGHSRTTRTGVYGATITEASTTAVLEINKDGQLIQDITSTSGATNITTNVHWTGTISNNLVTFDGGFQLTLLPGGIYMGYPSDVAKNVQESTAFHVEFCWLESPGKRQRLIRTYDVEGFAVSSTYFIESKV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0042B19.2" strand="+"/>
                <serials PGL_serial="4" AGS_serial="3" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="59428" stop="59724"/>
                    <exon start="59915" stop="60009"/>
                    <exon start="60744" stop="60861"/>
                    <exon start="60953" stop="60979"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>534</number_coding_nucleotides>
                  <number_encoded_amino_acids>178</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SVPIPSAMATAPAIFVPSTSLASSNARKINLSSWNEKLVIPQNFPFWTPKYQSRKPPSCSGTNVTVVQGDRNTTELPMSIDALDSFIRLNLGNWTGSFHQFDGHGNLMHRITTKLAVGSYGEGELMSLLQTLYIKQPPSTTSCSGDDCESEWFEYKIKETNMFTVDKYQQILLHLRYH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="59434" e_stop="60009"/>
            <exon e_start="60744" e_stop="60861"/>
            <exon e_start="60936" e_stop="61111"/>
            <exon e_start="61790" e_stop="61976"/>
            <exon e_start="62108" e_stop="62251"/>
            <exon e_start="62633" e_stop="63060"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.978" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.000" e_score="0.992"/>
          <exon-intron don_prob="0.997" acc_prob="0.762" e_score="1.000"/>
          <exon-intron don_prob="0.869" acc_prob="0.974" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.281" e_score="1.000"/>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="59434" e_stop="60009" e_length="576"/>
          </exon>
          <intron i_serial="1" don_prob="0.978" acc_prob="0.000">
            <gDNA_intron_boundary i_start="60010" i_stop="60743" i_length="734"/>
          </intron>
          <exon e_serial="2" e_score="0.992">
            <gDNA_exon_boundary e_start="60744" e_stop="60861" e_length="118"/>
          </exon>
          <intron i_serial="2" don_prob="0.994" acc_prob="0.000">
            <gDNA_intron_boundary i_start="60862" i_stop="60935" i_length="74"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="60936" e_stop="61111" e_length="176"/>
          </exon>
          <intron i_serial="3" don_prob="0.997" acc_prob="0.762">
            <gDNA_intron_boundary i_start="61112" i_stop="61789" i_length="678"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="61790" e_stop="61976" e_length="187"/>
          </exon>
          <intron i_serial="4" don_prob="0.869" acc_prob="0.974">
            <gDNA_intron_boundary i_start="61977" i_stop="62107" i_length="131"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="62108" e_stop="62251" e_length="144"/>
          </exon>
          <intron i_serial="5" don_prob="1.000" acc_prob="0.281">
            <gDNA_intron_boundary i_start="62252" i_stop="62632" i_length="381"/>
          </intron>
          <exon e_serial="6" e_score="0.995">
            <gDNA_exon_boundary e_start="62633" e_stop="63060" e_length="428"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59434" stop="60009"/>
              <exon start="60744" stop="60861"/>
              <exon start="60936" stop="60966"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E380004" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59434" stop="60009"/>
              <exon start="60744" stop="60819"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E213751" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59434" stop="59934"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E210154" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59442" stop="59711"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E201024" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60943" stop="61111"/>
              <exon start="61790" stop="61976"/>
              <exon start="62108" stop="62169"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E209186" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61043" stop="61111"/>
              <exon start="61790" stop="61976"/>
              <exon start="62108" stop="62251"/>
              <exon start="62633" stop="62778"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319590" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61078" stop="61111"/>
              <exon start="61790" stop="61976"/>
              <exon start="62108" stop="62198"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228387" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61890" stop="61976"/>
              <exon start="62108" stop="62251"/>
              <exon start="62633" stop="63060"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E538185" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62653" stop="63001"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E379407" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="4" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CCAATTCCATCCGCCATGGCAACGGCGCCAGCCATTTTTGTGCCTTCCACTTCTCTCGCTTCCTCCAATGCACGCAAGATTAATCTAAGTTCATGGAACGAGAAACTGGTTATACCCCAAAATTTTCCATTCTGGACTCCCAAGTACCAGTCTAGGAAACCACCGTCATGCTCCGGTACCAATGTCACGGTGGTCCAAGGTGATCGGAATACAACCGAACTACCAATGAGTATTGACGCTCTTGACAGTTTCATTCGCCTTAATTTGGGAAACTGGACCGGCTCTTTCCATGTCAGGATCAACTCCGTTCCTCTTTCTCTCTTTCTGTGGATGCATTGTCTTATTTTTGTCTATAACTTTATTATTGATAAATACACGTATATTTATGAATTTTTGATAAATATTCATATCCTATAATTTTTAGTTTGAGGTGGAAACGTGCATGGATTTGATTCCTTCATCTGCTTGATTTATTTTGCAGCAATTTGATGGTCATGGAAATTTGATGCATAGAATTACAACGAAACTTGCTGTGGGCTCTTATGGTGAAGGTGAACTGATGAGTTTATTACAAAC : GTTATACATCAAACAACCTCCATCTACCACTTCATGTTCTGGCGATGATTGTGAGTCAGAGTGGTTTGAGTACAAAATCAAAGAGACCAACATGTTTACCGTCGACAAATATCAACAG : TTTCTGTTTCTTTTCAGATTTTATTGCATTTGAGGTACCACTAAAAGTAGTTTGCAGATTGGCTTCTTCCCCAAGGAAAAGGCATACGCACTAAGATATCAGACTGCTGGCATGTTGGAGACTGTGTTAAGACAGGGAGTGCTAGGTGAAGATGATATCGGAGAAGAATCACCAAG : AAATCTGAAGCTTCCCTCTAAACGTCCTTCTATTGTATGTGAAAATTGTCTTTATTCACTGGAGAAAGATAGGCGAGTGAGAGCATTTCATATAATGGACCCAAAAGGAGTACTGGAAATGCTTCTTGTTTTCCTTGAAGAAAGAGGGAACGGAGAGGCCATTCCTCCCTCCTTTGACGATTTCAAG : GAGGATACTGAAAGAATTCTGCCTCATCTTGGAACTTGGAAAGGTCATTCGCGAACAACACGTACTGGTGTTTATGGAGCAACAATTACTGAAGCAAGTACAACTGCTGTTCTTGAAATCAACAAGGACGGCCAGCTAATTCAG : GATATCACGTCTACTTCTGGTGCGACTAATATTACAACAAATGTACATTGGACCGGTACCATATCCAATAACCTAGTGACATTCGACGGTGGTTTCCAGCTTACTCTGTTGCCTGGGGGCATTTACATGGGATACCCATCTGATGTGGCCAAGAATGTGCAAGAATCCACAGCATTTCACGTTGAGTTTTGTTGGCTAGAATCGCCTGGCAAGAGACAAAGACTTATCCGTACTTACGATGTAGAGGGCTTTGCTGTTTCATCTACTTATTTCATCGAGTCCAAGGTCTGAGTTATTTCCCCTGATTCAAAAAGATGTGCTTCAGACATCATATTTGCTCCCGCATGAACCATTTTTCCTGGGTACAATCACCAACACTGTAGTATCAATTGTATCTATCTATCTATATATCTGTTTTTATATATAGA</gDNA_template>
            <first_frame> P  I  P  S  A  M  A  T  A  P  A  I  F  V  P  S  T  S  L  A  S  S  N  A  R  K  I  N  L  S  S  W  N  E  K  L  V  I  P  Q  N  F  P  F  W  T  P  K  Y  Q  S  R  K  P  P  S  C  S  G  T  N  V  T  V  V  Q  G  D  R  N  T  T  E  L  P  M  S  I  D  A  L  D  S  F  I  R  L  N  L  G  N  W  T  G  S  F  H  V  R  I  N  S  V  P  L  S  L  F  L  W  M  H  C  L  I  F  V  Y  N  F  I  I  D  K  Y  T  Y  I  Y  E  F  L  I  N  I  H  I  L  *  F  L  V  *  G  G  N  V  H  G  F  D  S  F  I  C  L  I  Y  F  A  A  I  *  W  S  W  K  F  D  A  *  N  Y  N  E  T  C  C  G  L  L  W  *  R  *  T  D  E  F  I  T  N  :  V  I  H  Q  T  T  S  I  Y  H  F  M  F  W  R  *  L  *  V  R  V  V  *  V  Q  N  Q  R  D  Q  H  V  Y  R  R  Q  I  S  T   : V  S  V  S  F  Q  I  L  L  H  L  R  Y  H  *  K  *  F  A  D  W  L  L  P  Q  G  K  G  I  R  T  K  I  S  D  C  W  H  V  G  D  C  V  K  T  G  S  A  R  *  R  *  Y  R  R  R  I  T  K  :  K  S  E  A  S  L  *  T  S  F  Y  C  M  *  K  L  S  L  F  T  G  E  R  *  A  S  E  S  I  S  Y  N  G  P  K  R  S  T  G  N  A  S  C  F  P  *  R  K  R  E  R  R  G  H  S  S  L  L  *  R  F  Q   : G  G  Y  *  K  N  S  A  S  S  W  N  L  E  R  S  F  A  N  N  T  Y  W  C  L  W  S  N  N  Y  *  S  K  Y  N  C  C  S  *  N  Q  Q  G  R  P  A  N  S   : G  Y  H  V  Y  F  W  C  D  *  Y  Y  N  K  C  T  L  D  R  Y  H  I  Q  *  P  S  D  I  R  R  W  F  P  A  Y  S  V  A  W  G  H  L  H  G  I  P  I  *  C  G  Q  E  C  A  R  I  H  S  I  S  R  *  V  L  L  A  R  I  A  W  Q  E  T  K  T  Y  P  Y  L  R  C  R  G  L  C  C  F  I  Y  L  F  H  R  V  Q  G  L  S  Y  F  P  *  F  K  K  M  C  F  R  H  H  I  C  S  R  M  N  H  F  S  W  V  Q  S  P  T  L  *  Y  Q  L  Y  L  S  I  Y  I  S  V  F  I  Y  R </first_frame>
            <second_frame>  Q  F  H  P  P  W  Q  R  R  Q  P  F  L  C  L  P  L  L  S  L  P  P  M  H  A  R  L  I  *  V  H  G  T  R  N  W  L  Y  P  K  I  F  H  S  G  L  P  S  T  S  L  G  N  H  R  H  A  P  V  P  M  S  R  W  S  K  V  I  G  I  Q  P  N  Y  Q  *  V  L  T  L  L  T  V  S  F  A  L  I  W  E  T  G  P  A  L  S  M  S  G  S  T  P  F  L  F  L  S  F  C  G  C  I  V  L  F  L  S  I  T  L  L  L  I  N  T  R  I  F  M  N  F  *  *  I  F  I  S  Y  N  F  *  F  E  V  E  T  C  M  D  L  I  P  S  S  A  *  F  I  L  Q  Q  F  D  G  H  G  N  L  M  H  R  I  T  T  K  L  A  V  G  S  Y  G  E  G  E  L  M  S  L  L  Q  T :   L  Y  I  K  Q  P  P  S  T  T  S  C  S  G  D  D  C  E  S  E  W  F  E  Y  K  I  K  E  T  N  M  F  T  V  D  K  Y  Q  Q  :  F  L  F  L  F  R  F  Y  C  I  *  G  T  T  K  S  S  L  Q  I  G  F  F  P  K  E  K  A  Y  A  L  R  Y  Q  T  A  G  M  L  E  T  V  L  R  Q  G  V  L  G  E  D  D  I  G  E  E  S  P  R :   N  L  K  L  P  S  K  R  P  S  I  V  C  E  N  C  L  Y  S  L  E  K  D  R  R  V  R  A  F  H  I  M  D  P  K  G  V  L  E  M  L  L  V  F  L  E  E  R  G  N  G  E  A  I  P  P  S  F  D  D  F  K  :  E  D  T  E  R  I  L  P  H  L  G  T  W  K  G  H  S  R  T  T  R  T  G  V  Y  G  A  T  I  T  E  A  S  T  T  A  V  L  E  I  N  K  D  G  Q  L  I  Q  :  D  I  T  S  T  S  G  A  T  N  I  T  T  N  V  H  W  T  G  T  I  S  N  N  L  V  T  F  D  G  G  F  Q  L  T  L  L  P  G  G  I  Y  M  G  Y  P  S  D  V  A  K  N  V  Q  E  S  T  A  F  H  V  E  F  C  W  L  E  S  P  G  K  R  Q  R  L  I  R  T  Y  D  V  E  G  F  A  V  S  S  T  Y  F  I  E  S  K  V  *  V  I  S  P  D  S  K  R  C  A  S  D  I  I  F  A  P  A  *  T  I  F  P  G  Y  N  H  Q  H  C  S  I  N  C  I  Y  L  S  I  Y  L  F  L  Y  I   </second_frame>
            <third_frame>   N  S  I  R  H  G  N  G  A  S  H  F  C  A  F  H  F  S  R  F  L  Q  C  T  Q  D  *  S  K  F  M  E  R  E  T  G  Y  T  P  K  F  S  I  L  D  S  Q  V  P  V  *  E  T  T  V  M  L  R  Y  Q  C  H  G  G  P  R  *  S  E  Y  N  R  T  T  N  E  Y  *  R  S  *  Q  F  H  S  P  *  F  G  K  L  D  R  L  F  P  C  Q  D  Q  L  R  S  S  F  S  L  S  V  D  A  L  S  Y  F  C  L  *  L  Y  Y  *  *  I  H  V  Y  L  *  I  F  D  K  Y  S  Y  P  I  I  F  S  L  R  W  K  R  A  W  I  *  F  L  H  L  L  D  L  F  C  S  N  L  M  V  M  E  I  *  C  I  E  L  Q  R  N  L  L  W  A  L  M  V  K  V  N  *  *  V  Y  Y  K   : R  Y  T  S  N  N  L  H  L  P  L  H  V  L  A  M  I  V  S  Q  S  G  L  S  T  K  S  K  R  P  T  C  L  P  S  T  N  I  N  S :   F  C  F  F  S  D  F  I  A  F  E  V  P  L  K  V  V  C  R  L  A  S  S  P  R  K  R  H  T  H  *  D  I  R  L  L  A  C  W  R  L  C  *  D  R  E  C  *  V  K  M  I  S  E  K  N  H  Q   : E  I  *  S  F  P  L  N  V  L  L  L  Y  V  K  I  V  F  I  H  W  R  K  I  G  E  *  E  H  F  I  *  W  T  Q  K  E  Y  W  K  C  F  L  F  S  L  K  K  E  G  T  E  R  P  F  L  P  P  L  T  I  S  R :   R  I  L  K  E  F  C  L  I  L  E  L  G  K  V  I  R  E  Q  H  V  L  V  F  M  E  Q  Q  L  L  K  Q  V  Q  L  L  F  L  K  S  T  R  T  A  S  *  F  R :   I  S  R  L  L  L  V  R  L  I  L  Q  Q  M  Y  I  G  P  V  P  Y  P  I  T  *  *  H  S  T  V  V  S  S  L  L  C  C  L  G  A  F  T  W  D  T  H  L  M  W  P  R  M  C  K  N  P  Q  H  F  T  L  S  F  V  G  *  N  R  L  A  R  D  K  D  L  S  V  L  T  M  *  R  A  L  L  F  H  L  L  I  S  S  S  P  R  S  E  L  F  P  L  I  Q  K  D  V  L  Q  T  S  Y  L  L  P  H  E  P  F  F  L  G  T  I  T  N  T  V  V  S  I  V  S  I  Y  L  Y  I  C  F  Y  I  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0042B19.2" strand="+"/>
                <serials PGL_serial="4" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="60969" stop="61111"/>
                    <exon start="61790" stop="61976"/>
                    <exon start="62108" stop="62251"/>
                    <exon start="62633" stop="62923"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>762</number_coding_nucleotides>
                  <number_encoded_amino_acids>254</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GTTKSSLQIGFFPKEKAYALRYQTAGMLETVLRQGVLGEDDIGEESPRNLKLPSKRPSIVCENCLYSLEKDRRVRAFHIMDPKGVLEMLLVFLEERGNGEAIPPSFDDFKEDTERILPHLGTWKGHSRTTRTGVYGATITEASTTAVLEINKDGQLIQDITSTSGATNITTNVHWTGTISNNLVTFDGGFQLTLLPGGIYMGYPSDVAKNVQESTAFHVEFCWLESPGKRQRLIRTYDVEGFAVSSTYFIESKV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0042B19.2" strand="+"/>
                <serials PGL_serial="4" AGS_serial="4" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="59434" stop="59850"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>414</number_coding_nucleotides>
                  <number_encoded_amino_acids>138</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PIPSAMATAPAIFVPSTSLASSNARKINLSSWNEKLVIPQNFPFWTPKYQSRKPPSCSGTNVTVVQGDRNTTELPMSIDALDSFIRLNLGNWTGSFHVRINSVPLSLFLWMHCLIFVYNFIIDKYTYIYEFLINIHIL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0042B19.2" strand="+"/>
                <serials PGL_serial="4" AGS_serial="4" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="59903" stop="60009"/>
                    <exon start="60744" stop="60861"/>
                    <exon start="60936" stop="60968"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>255</number_coding_nucleotides>
                  <number_encoded_amino_acids>85</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FILQQFDGHGNLMHRITTKLAVGSYGEGELMSLLQTLYIKQPPSTTSCSGDDCESEWFEYKIKETNMFTVDKYQQFLFLFRFYCI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="5">
          <exon_coordinates>
            <exon e_start="61789" e_stop="61976"/>
            <exon e_start="62108" e_stop="62251"/>
            <exon e_start="62633" e_stop="63060"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.869" acc_prob="0.974" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.281" e_score="1.000"/>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="61789" e_stop="61976" e_length="188"/>
          </exon>
          <intron i_serial="1" don_prob="0.869" acc_prob="0.974">
            <gDNA_intron_boundary i_start="61977" i_stop="62107" i_length="131"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="62108" e_stop="62251" e_length="144"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.281">
            <gDNA_intron_boundary i_start="62252" i_stop="62632" i_length="381"/>
          </intron>
          <exon e_serial="3" e_score="0.995">
            <gDNA_exon_boundary e_start="62633" e_stop="63060" e_length="428"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61789" stop="61976"/>
              <exon start="62108" stop="62251"/>
              <exon start="62633" stop="62821"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E276022" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61890" stop="61976"/>
              <exon start="62108" stop="62251"/>
              <exon start="62633" stop="63060"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E538185" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62653" stop="63001"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E379407" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="5" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAAATCTGAAGCTTCCCTCTAAACGTCCTTCTATTGTATGTGAAAATTGTCTTTATTCACTGGAGAAAGATAGGCGAGTGAGAGCATTTCATATAATGGACCCAAAAGGAGTACTGGAAATGCTTCTTGTTTTCCTTGAAGAAAGAGGGAACGGAGAGGCCATTCCTCCCTCCTTTGACGATTTCAAG : GAGGATACTGAAAGAATTCTGCCTCATCTTGGAACTTGGAAAGGTCATTCGCGAACAACACGTACTGGTGTTTATGGAGCAACAATTACTGAAGCAAGTACAACTGCTGTTCTTGAAATCAACAAGGACGGCCAGCTAATTCAG : GATATCACGTCTACTTCTGGTGCGACTAATATTACAACAAATGTACATTGGACCGGTACCATATCCAATAACCTAGTGACATTCGACGGTGGTTTCCAGCTTACTCTGTTGCCTGGGGGCATTTACATGGGATACCCATCTGATGTGGCCAAGAATGTGCAAGAATCCACAGCATTTCACGTTGAGTTTTGTTGGCTAGAATCGCCTGGCAAGAGACAAAGACTTATCCGTACTTACGATGTAGAGGGCTTTGCTGTTTCATCTACTTATTTCATCGAGTCCAAGGTCTGAGTTATTTCCCCTGATTCAAAAAGATGTGCTTCAGACATCATATTTGCTCCCGCATGAACCATTTTTCCTGGGTACAATCACCAACACTGTAGTATCAATTGTATCTATCTATCTATATATCTGTTTTTATATATAGA</gDNA_template>
            <first_frame> E  I  *  S  F  P  L  N  V  L  L  L  Y  V  K  I  V  F  I  H  W  R  K  I  G  E  *  E  H  F  I  *  W  T  Q  K  E  Y  W  K  C  F  L  F  S  L  K  K  E  G  T  E  R  P  F  L  P  P  L  T  I  S  R :   R  I  L  K  E  F  C  L  I  L  E  L  G  K  V  I  R  E  Q  H  V  L  V  F  M  E  Q  Q  L  L  K  Q  V  Q  L  L  F  L  K  S  T  R  T  A  S  *  F  R :   I  S  R  L  L  L  V  R  L  I  L  Q  Q  M  Y  I  G  P  V  P  Y  P  I  T  *  *  H  S  T  V  V  S  S  L  L  C  C  L  G  A  F  T  W  D  T  H  L  M  W  P  R  M  C  K  N  P  Q  H  F  T  L  S  F  V  G  *  N  R  L  A  R  D  K  D  L  S  V  L  T  M  *  R  A  L  L  F  H  L  L  I  S  S  S  P  R  S  E  L  F  P  L  I  Q  K  D  V  L  Q  T  S  Y  L  L  P  H  E  P  F  F  L  G  T  I  T  N  T  V  V  S  I  V  S  I  Y  L  Y  I  C  F  Y  I  *  </first_frame>
            <second_frame>  K  S  E  A  S  L  *  T  S  F  Y  C  M  *  K  L  S  L  F  T  G  E  R  *  A  S  E  S  I  S  Y  N  G  P  K  R  S  T  G  N  A  S  C  F  P  *  R  K  R  E  R  R  G  H  S  S  L  L  *  R  F  Q   : G  G  Y  *  K  N  S  A  S  S  W  N  L  E  R  S  F  A  N  N  T  Y  W  C  L  W  S  N  N  Y  *  S  K  Y  N  C  C  S  *  N  Q  Q  G  R  P  A  N  S   : G  Y  H  V  Y  F  W  C  D  *  Y  Y  N  K  C  T  L  D  R  Y  H  I  Q  *  P  S  D  I  R  R  W  F  P  A  Y  S  V  A  W  G  H  L  H  G  I  P  I  *  C  G  Q  E  C  A  R  I  H  S  I  S  R  *  V  L  L  A  R  I  A  W  Q  E  T  K  T  Y  P  Y  L  R  C  R  G  L  C  C  F  I  Y  L  F  H  R  V  Q  G  L  S  Y  F  P  *  F  K  K  M  C  F  R  H  H  I  C  S  R  M  N  H  F  S  W  V  Q  S  P  T  L  *  Y  Q  L  Y  L  S  I  Y  I  S  V  F  I  Y  R </second_frame>
            <third_frame>   N  L  K  L  P  S  K  R  P  S  I  V  C  E  N  C  L  Y  S  L  E  K  D  R  R  V  R  A  F  H  I  M  D  P  K  G  V  L  E  M  L  L  V  F  L  E  E  R  G  N  G  E  A  I  P  P  S  F  D  D  F  K  :  E  D  T  E  R  I  L  P  H  L  G  T  W  K  G  H  S  R  T  T  R  T  G  V  Y  G  A  T  I  T  E  A  S  T  T  A  V  L  E  I  N  K  D  G  Q  L  I  Q  :  D  I  T  S  T  S  G  A  T  N  I  T  T  N  V  H  W  T  G  T  I  S  N  N  L  V  T  F  D  G  G  F  Q  L  T  L  L  P  G  G  I  Y  M  G  Y  P  S  D  V  A  K  N  V  Q  E  S  T  A  F  H  V  E  F  C  W  L  E  S  P  G  K  R  Q  R  L  I  R  T  Y  D  V  E  G  F  A  V  S  S  T  Y  F  I  E  S  K  V  *  V  I  S  P  D  S  K  R  C  A  S  D  I  I  F  A  P  A  *  T  I  F  P  G  Y  N  H  Q  H  C  S  I  N  C  I  Y  L  S  I  Y  L  F  L  Y  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0042B19.2" strand="+"/>
                <serials PGL_serial="4" AGS_serial="5" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="61791" stop="61976"/>
                    <exon start="62108" stop="62251"/>
                    <exon start="62633" stop="62923"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>618</number_coding_nucleotides>
                  <number_encoded_amino_acids>206</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NLKLPSKRPSIVCENCLYSLEKDRRVRAFHIMDPKGVLEMLLVFLEERGNGEAIPPSFDDFKEDTERILPHLGTWKGHSRTTRTGVYGATITEASTTAVLEINKDGQLIQDITSTSGATNITTNVHWTGTISNNLVTFDGGFQLTLLPGGIYMGYPSDVAKNVQESTAFHVEFCWLESPGKRQRLIRTYDVEGFAVSSTYFIESKV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="65732" PGL_stop="68399"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="65732" e_stop="66116"/>
            <exon e_start="66469" e_stop="67196"/>
            <exon e_start="67308" e_stop="67460"/>
            <exon e_start="68017" e_stop="68399"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.970" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.977" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="65732" e_stop="66116" e_length="385"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.996">
            <gDNA_intron_boundary i_start="66117" i_stop="66468" i_length="352"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="66469" e_stop="67196" e_length="728"/>
          </exon>
          <intron i_serial="2" don_prob="0.970" acc_prob="0.997">
            <gDNA_intron_boundary i_start="67197" i_stop="67307" i_length="111"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="67308" e_stop="67460" e_length="153"/>
          </exon>
          <intron i_serial="3" don_prob="0.997" acc_prob="0.977">
            <gDNA_intron_boundary i_start="67461" i_stop="68016" i_length="556"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="68017" e_stop="68399" e_length="383"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65732" stop="66116"/>
              <exon start="66469" stop="66953"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E705844" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65734" stop="66116"/>
              <exon start="66469" stop="66812"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E326766" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65734" stop="66116"/>
              <exon start="66469" stop="66739"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E328997" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65759" stop="66116"/>
              <exon start="66469" stop="66586"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E364738" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65773" stop="66116"/>
              <exon start="66469" stop="66571"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278858" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65801" stop="66116"/>
              <exon start="66469" stop="66766"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355776" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66078" stop="66116"/>
              <exon start="66469" stop="67056"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E236443" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66531" stop="66777"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E239839" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66810" stop="67196"/>
              <exon start="67308" stop="67460"/>
              <exon start="68017" stop="68373"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E708797" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66874" stop="67196"/>
              <exon start="67308" stop="67460"/>
              <exon start="68017" stop="68399"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E704441" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67081" stop="67196"/>
              <exon start="67308" stop="67460"/>
              <exon start="68017" stop="68374"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E235450" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CCACTTTCTTCTTTATCTCTTGAGAAGAAGAAGAAGAAAACTGAAAATGGGGGAAACAGGGGAAGCTTCAGCAATATCGTTTCCATCTTTGACAATTCCACCTCGCCCTTCATTTGAATCCTTTTTTAACATGTCTTCTTTCAGCCCAGGTCCAATGTCTCTTGTTTCCAGTTTCTTGTCTGATCAGAGCCCTGATTCTGCAGATTGTCCTCCTTCTTTCTCCCAGCTTCTCGCCGGATATGAATATTCTGGAGATCCTCCTGGGTGTCAAAAGAACTCTGGGTATAACCAAAATGGGTCTGTGAATCCTCAATTGTTCGTTATTCCCTCTGGTTTGAGTCCTTCTGGATTCCTTAATTCTCCTGGCTTTCTTTCCCCACTTCAG : AGTCCCTTTGGAATGTCACATCAGCAGGCTCTAGCACATGTTACAGCACAGGCTGAATTTTCTAGTTCATATATGCAAATGCAAATGCAAATGCAAGCCCAAGACCAGTGTTCCTCTCAGGTGGCTCCAGTAGAAGCATTAGGACATGAGTTGTCGATTGATCCAAAGGAGTCTTCCTTGCAGATAAAGGAATGTCTGCAATCTAGTTTGGATAACAAGCCATCAGACAATCAGGGTAAGCAATTTGAACAGCCGGAGGTTTCTCAATCTGAGAACAAGACATCCTCTGGTGCTCTCGATAAGCCAGCTTGTGATGGTTATAACTGGAGAAAATATGGTCAGAAAAAGGTTAAAGCTAGTGAATGCCCTAGGAGCTACTATAAGTGCACATATCTCAAATGTCTAGTGAAGAAGAAGGTTGAGCGGTCTGTTGATGGTCACATAACTGAGATCACATATAATGGCCGTCACAACCATGATCAACCAACCAAACGAAGAAAAAATGGTTCTGCTTTGGATAATACAGACTGCTTTGGAGTTCGACCAGATATTAGTACACATGATTGGACAGTAATGAATAGCTCGGATGGGTCTTCTCCTTCTCGATCTGACCAGGTTCCAACCCAAATGGTATCTGAACTTCTTGTGAAAAGAGAATGTGATGAAACCGAAAGCTATTTGATAGACGTAGATGATGAAGGGCATGATGAACCAGATGCAAAGAGAAC : GAAGACGGCAATTGAGACTGTAGCTTCATCACATGTCACAGTAGCTGAATCCAAGATTGTTCTGCAGACGAGAAGTGAAGTTGATTTCTTAGATGATGGATATAAATGGCGAAAATATGGGCAGAAGGTGGTAAAGGGGACTCAGCATCCAAG : GAGTTACTATCGGTGCACATATCCTGGATGCAATGTCCGCAAACAAGTCGAGAGGGCTTCAACTGATCCAAAAGCTGTCATAACAACATATGAAGGCAAGCATAATCATGATATTCCTACTGTTAGTGTTAGGAATAGAGGAACAAGGAATAAATACAGCTAAAGATAGCGTTGAGAACGTAAGAAACAGTGTGAAGGCCTTCAGTTCACAAAAATATCTTGGTTTCTGAAAACAACAACAAAATTCCCTCGTGTGAAAACTGAAAGATTGCAGCATTAGTAGCATCAGGAAAAGTAGAAGGGTGAAAAGATGTGGTTTGAGCTTCTTACTTCTGTACAAAAAGCTTATTATATTATCTATTCCATGTTGAAAACCACATGCT</gDNA_template>
            <first_frame> P  L  S  S  L  S  L  E  K  K  K  K  K  T  E  N  G  G  N  R  G  S  F  S  N  I  V  S  I  F  D  N  S  T  S  P  F  I  *  I  L  F  *  H  V  F  F  Q  P  R  S  N  V  S  C  F  Q  F  L  V  *  S  E  P  *  F  C  R  L  S  S  F  F  L  P  A  S  R  R  I  *  I  F  W  R  S  S  W  V  S  K  E  L  W  V  *  P  K  W  V  C  E  S  S  I  V  R  Y  S  L  W  F  E  S  F  W  I  P  *  F  S  W  L  S  F  P  T  S   : E  S  L  W  N  V  T  S  A  G  S  S  T  C  Y  S  T  G  *  I  F  *  F  I  Y  A  N  A  N  A  N  A  S  P  R  P  V  F  L  S  G  G  S  S  R  S  I  R  T  *  V  V  D  *  S  K  G  V  F  L  A  D  K  G  M  S  A  I  *  F  G  *  Q  A  I  R  Q  S  G  *  A  I  *  T  A  G  G  F  S  I  *  E  Q  D  I  L  W  C  S  R  *  A  S  L  *  W  L  *  L  E  K  I  W  S  E  K  G  *  S  *  *  M  P  *  E  L  L  *  V  H  I  S  Q  M  S  S  E  E  E  G  *  A  V  C  *  W  S  H  N  *  D  H  I  *  W  P  S  Q  P  *  S  T  N  Q  T  K  K  K  W  F  C  F  G  *  Y  R  L  L  W  S  S  T  R  Y  *  Y  T  *  L  D  S  N  E  *  L  G  W  V  F  S  F  S  I  *  P  G  S  N  P  N  G  I  *  T  S  C  E  K  R  M  *  *  N  R  K  L  F  D  R  R  R  *  *  R  A  *  *  T  R  C  K  E  N  :  E  D  G  N  *  D  C  S  F  I  T  C  H  S  S  *  I  Q  D  C  S  A  D  E  K  *  S  *  F  L  R  *  W  I  *  M  A  K  I  W  A  E  G  G  K  G  D  S  A  S  K  :  E  L  L  S  V  H  I  S  W  M  Q  C  P  Q  T  S  R  E  G  F  N  *  S  K  S  C  H  N  N  I  *  R  Q  A  *  S  *  Y  S  Y  C  *  C  *  E  *  R  N  K  E  *  I  Q  L  K  I  A  L  R  T  *  E  T  V  *  R  P  S  V  H  K  N  I  L  V  S  E  N  N  N  K  I  P  S  C  E  N  *  K  I  A  A  L  V  A  S  G  K  V  E  G  *  K  D  V  V  *  A  S  Y  F  C  T  K  S  L  L  Y  Y  L  F  H  V  E  N  H  M   </first_frame>
            <second_frame>  H  F  L  L  Y  L  L  R  R  R  R  R  K  L  K  M  G  E  T  G  E  A  S  A  I  S  F  P  S  L  T  I  P  P  R  P  S  F  E  S  F  F  N  M  S  S  F  S  P  G  P  M  S  L  V  S  S  F  L  S  D  Q  S  P  D  S  A  D  C  P  P  S  F  S  Q  L  L  A  G  Y  E  Y  S  G  D  P  P  G  C  Q  K  N  S  G  Y  N  Q  N  G  S  V  N  P  Q  L  F  V  I  P  S  G  L  S  P  S  G  F  L  N  S  P  G  F  L  S  P  L  Q  :  S  P  F  G  M  S  H  Q  Q  A  L  A  H  V  T  A  Q  A  E  F  S  S  S  Y  M  Q  M  Q  M  Q  M  Q  A  Q  D  Q  C  S  S  Q  V  A  P  V  E  A  L  G  H  E  L  S  I  D  P  K  E  S  S  L  Q  I  K  E  C  L  Q  S  S  L  D  N  K  P  S  D  N  Q  G  K  Q  F  E  Q  P  E  V  S  Q  S  E  N  K  T  S  S  G  A  L  D  K  P  A  C  D  G  Y  N  W  R  K  Y  G  Q  K  K  V  K  A  S  E  C  P  R  S  Y  Y  K  C  T  Y  L  K  C  L  V  K  K  K  V  E  R  S  V  D  G  H  I  T  E  I  T  Y  N  G  R  H  N  H  D  Q  P  T  K  R  R  K  N  G  S  A  L  D  N  T  D  C  F  G  V  R  P  D  I  S  T  H  D  W  T  V  M  N  S  S  D  G  S  S  P  S  R  S  D  Q  V  P  T  Q  M  V  S  E  L  L  V  K  R  E  C  D  E  T  E  S  Y  L  I  D  V  D  D  E  G  H  D  E  P  D  A  K  R  T :   K  T  A  I  E  T  V  A  S  S  H  V  T  V  A  E  S  K  I  V  L  Q  T  R  S  E  V  D  F  L  D  D  G  Y  K  W  R  K  Y  G  Q  K  V  V  K  G  T  Q  H  P  R :   S  Y  Y  R  C  T  Y  P  G  C  N  V  R  K  Q  V  E  R  A  S  T  D  P  K  A  V  I  T  T  Y  E  G  K  H  N  H  D  I  P  T  V  S  V  R  N  R  G  T  R  N  K  Y  S  *  R  *  R  *  E  R  K  K  Q  C  E  G  L  Q  F  T  K  I  S  W  F  L  K  T  T  T  K  F  P  R  V  K  T  E  R  L  Q  H  *  *  H  Q  E  K  *  K  G  E  K  M  W  F  E  L  L  T  S  V  Q  K  A  Y  Y  I  I  Y  S  M  L  K  T  T  C  </second_frame>
            <third_frame>   T  F  F  F  I  S  *  E  E  E  E  E  N  *  K  W  G  K  Q  G  K  L  Q  Q  Y  R  F  H  L  *  Q  F  H  L  A  L  H  L  N  P  F  L  T  C  L  L  S  A  Q  V  Q  C  L  L  F  P  V  S  C  L  I  R  A  L  I  L  Q  I  V  L  L  L  S  P  S  F  S  P  D  M  N  I  L  E  I  L  L  G  V  K  R  T  L  G  I  T  K  M  G  L  *  I  L  N  C  S  L  F  P  L  V  *  V  L  L  D  S  L  I  L  L  A  F  F  P  H  F  R :   V  P  L  E  C  H  I  S  R  L  *  H  M  L  Q  H  R  L  N  F  L  V  H  I  C  K  C  K  C  K  C  K  P  K  T  S  V  P  L  R  W  L  Q  *  K  H  *  D  M  S  C  R  L  I  Q  R  S  L  P  C  R  *  R  N  V  C  N  L  V  W  I  T  S  H  Q  T  I  R  V  S  N  L  N  S  R  R  F  L  N  L  R  T  R  H  P  L  V  L  S  I  S  Q  L  V  M  V  I  T  G  E  N  M  V  R  K  R  L  K  L  V  N  A  L  G  A  T  I  S  A  H  I  S  N  V  *  *  R  R  R  L  S  G  L  L  M  V  T  *  L  R  S  H  I  M  A  V  T  T  M  I  N  Q  P  N  E  E  K  M  V  L  L  W  I  I  Q  T  A  L  E  F  D  Q  I  L  V  H  M  I  G  Q  *  *  I  A  R  M  G  L  L  L  L  D  L  T  R  F  Q  P  K  W  Y  L  N  F  L  *  K  E  N  V  M  K  P  K  A  I  *  *  T  *  M  M  K  G  M  M  N  Q  M  Q  R  E   : R  R  R  Q  L  R  L  *  L  H  H  M  S  Q  *  L  N  P  R  L  F  C  R  R  E  V  K  L  I  S  *  M  M  D  I  N  G  E  N  M  G  R  R  W  *  R  G  L  S  I  Q   : G  V  T  I  G  A  H  I  L  D  A  M  S  A  N  K  S  R  G  L  Q  L  I  Q  K  L  S  *  Q  H  M  K  A  S  I  I  M  I  F  L  L  L  V  L  G  I  E  E  Q  G  I  N  T  A  K  D  S  V  E  N  V  R  N  S  V  K  A  F  S  S  Q  K  Y  L  G  F  *  K  Q  Q  Q  N  S  L  V  *  K  L  K  D  C  S  I  S  S  I  R  K  S  R  R  V  K  R  C  G  L  S  F  L  L  L  Y  K  K  L  I  I  L  S  I  P  C  *  K  P  H  A </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0042B19.2" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="65733" stop="66116"/>
                    <exon start="66469" stop="67196"/>
                    <exon start="67308" stop="67460"/>
                    <exon start="68017" stop="68179"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1425</number_coding_nucleotides>
                  <number_encoded_amino_acids>475</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HFLLYLLRRRRRKLKMGETGEASAISFPSLTIPPRPSFESFFNMSSFSPGPMSLVSSFLSDQSPDSADCPPSFSQLLAGYEYSGDPPGCQKNSGYNQNGSVNPQLFVIPSGLSPSGFLNSPGFLSPLQSPFGMSHQQALAHVTAQAEFSSSYMQMQMQMQAQDQCSSQVAPVEALGHELSIDPKESSLQIKECLQSSLDNKPSDNQGKQFEQPEVSQSENKTSSGALDKPACDGYNWRKYGQKKVKASECPRSYYKCTYLKCLVKKKVERSVDGHITEITYNGRHNHDQPTKRRKNGSALDNTDCFGVRPDISTHDWTVMNSSDGSSPSRSDQVPTQMVSELLVKRECDETESYLIDVDDEGHDEPDAKRTKTAIETVASSHVTVAESKIVLQTRSEVDFLDDGYKWRKYGQKVVKGTQHPRSYYRCTYPGCNVRKQVERASTDPKAVITTYEGKHNHDIPTVSVRNRGTRNKYS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="67797" e_stop="68288"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="67797" e_stop="68288" e_length="492"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67797" stop="68288"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E398658" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAGAATTTAAAGATCTTTATATGTGCATATGATTAGTCATTAGAACAAACAAGTGCAGTAAGATACTCTGGAGATTAAAATCAAGTGCTATAATCAGCTGCAGCGTCTTGTTTGAGCAATACTAGTTCTTTGTCCTTCCAGAATATGTTTATCACATGTGTCCTGTTCTTTTGCTATATGGCATCAATAATCCGCTTGTGCATCCACACTTGATATACAGGAGTTACTATCGGTGCACATATCCTGGATGCAATGTCCGCAAACAAGTCGAGAGGGCTTCAACTGATCCAAAAGCTGTCATAACAACATATGAAGGCAAGCATAATCATGATATTCCTACTGTTAGTGTTAGGAATAGAGGAACAAGGAATAAATACAGCTAAAGATAGCGTTGAGAACGTAAGAAACAGTGTGAAGGCCTTCAGTTCACAAAAATATCTTGGTTTCTGAAAACAACAACAAAATTCCCTCGTGTGAAAACTGAAAGATTGC</gDNA_template>
            <first_frame> Q  N  L  K  I  F  I  C  A  Y  D  *  S  L  E  Q  T  S  A  V  R  Y  S  G  D  *  N  Q  V  L  *  S  A  A  A  S  C  L  S  N  T  S  S  L  S  F  Q  N  M  F  I  T  C  V  L  F  F  C  Y  M  A  S  I  I  R  L  C  I  H  T  *  Y  T  G  V  T  I  G  A  H  I  L  D  A  M  S  A  N  K  S  R  G  L  Q  L  I  Q  K  L  S  *  Q  H  M  K  A  S  I  I  M  I  F  L  L  L  V  L  G  I  E  E  Q  G  I  N  T  A  K  D  S  V  E  N  V  R  N  S  V  K  A  F  S  S  Q  K  Y  L  G  F  *  K  Q  Q  Q  N  S  L  V  *  K  L  K  D  C </first_frame>
            <second_frame>  R  I  *  R  S  L  Y  V  H  M  I  S  H  *  N  K  Q  V  Q  *  D  T  L  E  I  K  I  K  C  Y  N  Q  L  Q  R  L  V  *  A  I  L  V  L  C  P  S  R  I  C  L  S  H  V  S  C  S  F  A  I  W  H  Q  *  S  A  C  A  S  T  L  D  I  Q  E  L  L  S  V  H  I  S  W  M  Q  C  P  Q  T  S  R  E  G  F  N  *  S  K  S  C  H  N  N  I  *  R  Q  A  *  S  *  Y  S  Y  C  *  C  *  E  *  R  N  K  E  *  I  Q  L  K  I  A  L  R  T  *  E  T  V  *  R  P  S  V  H  K  N  I  L  V  S  E  N  N  N  K  I  P  S  C  E  N  *  K  I   </second_frame>
            <third_frame>   E  F  K  D  L  Y  M  C  I  *  L  V  I  R  T  N  K  C  S  K  I  L  W  R  L  K  S  S  A  I  I  S  C  S  V  L  F  E  Q  Y  *  F  F  V  L  P  E  Y  V  Y  H  M  C  P  V  L  L  L  Y  G  I  N  N  P  L  V  H  P  H  L  I  Y  R  S  Y  Y  R  C  T  Y  P  G  C  N  V  R  K  Q  V  E  R  A  S  T  D  P  K  A  V  I  T  T  Y  E  G  K  H  N  H  D  I  P  T  V  S  V  R  N  R  G  T  R  N  K  Y  S  *  R  *  R  *  E  R  K  K  Q  C  E  G  L  Q  F  T  K  I  S  W  F  L  K  T  T  T  K  F  P  R  V  K  T  E  R  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0042B19.2" strand="+"/>
                <serials PGL_serial="5" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="67922" stop="68179"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>255</number_coding_nucleotides>
                  <number_encoded_amino_acids>85</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FFVLPEYVYHMCPVLLLYGINNPLVHPHLIYRSYYRCTYPGCNVRKQVERASTDPKAVITTYEGKHNHDIPTVSVRNRGTRNKYS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="65733" e_stop="66150"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.943"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.943">
            <gDNA_exon_boundary e_start="65733" e_stop="66150" e_length="418"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65733" stop="66150"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E298277" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CACTTTCTTCTTTATCTCTTGAGAAGAAGAAGAAGAAAACTGAAAATGGGGGAAACAGGGGAAGCTTCAGCAATATCGTTTCCATCTTTGACAATTCCACCTCGCCCTTCATTTGAATCCTTTTTTAACATGTCTTCTTTCAGCCCAGGTCCAATGTCTCTTGTTTCCAGTTTCTTGTCTGATCAGAGCCCTGATTCTGCAGATTGTCCTCCTTCTTTCTCCCAGCTTCTCGCCGGATATGAATATTCTGGAGATCCTCCTGGGTGTCAAAAGAACTCTGGGTATAACCAAAATGGGTCTGTGAATCCTCAATTGTTCGTTATTCCCTCTGGTTTGAGTCCTTCTGGATTCCTTAATTCTCCTGGCTTTCTTTCCCCACTTCAGGTAAAAATATAATCTGCTCAAATTCTTCATCTAT</gDNA_template>
            <first_frame> H  F  L  L  Y  L  L  R  R  R  R  R  K  L  K  M  G  E  T  G  E  A  S  A  I  S  F  P  S  L  T  I  P  P  R  P  S  F  E  S  F  F  N  M  S  S  F  S  P  G  P  M  S  L  V  S  S  F  L  S  D  Q  S  P  D  S  A  D  C  P  P  S  F  S  Q  L  L  A  G  Y  E  Y  S  G  D  P  P  G  C  Q  K  N  S  G  Y  N  Q  N  G  S  V  N  P  Q  L  F  V  I  P  S  G  L  S  P  S  G  F  L  N  S  P  G  F  L  S  P  L  Q  V  K  I  *  S  A  Q  I  L  H  L  </first_frame>
            <second_frame>  T  F  F  F  I  S  *  E  E  E  E  E  N  *  K  W  G  K  Q  G  K  L  Q  Q  Y  R  F  H  L  *  Q  F  H  L  A  L  H  L  N  P  F  L  T  C  L  L  S  A  Q  V  Q  C  L  L  F  P  V  S  C  L  I  R  A  L  I  L  Q  I  V  L  L  L  S  P  S  F  S  P  D  M  N  I  L  E  I  L  L  G  V  K  R  T  L  G  I  T  K  M  G  L  *  I  L  N  C  S  L  F  P  L  V  *  V  L  L  D  S  L  I  L  L  A  F  F  P  H  F  R  *  K  Y  N  L  L  K  F  F  I  Y </second_frame>
            <third_frame>   L  S  S  L  S  L  E  K  K  K  K  K  T  E  N  G  G  N  R  G  S  F  S  N  I  V  S  I  F  D  N  S  T  S  P  F  I  *  I  L  F  *  H  V  F  F  Q  P  R  S  N  V  S  C  F  Q  F  L  V  *  S  E  P  *  F  C  R  L  S  S  F  F  L  P  A  S  R  R  I  *  I  F  W  R  S  S  W  V  S  K  E  L  W  V  *  P  K  W  V  C  E  S  S  I  V  R  Y  S  L  W  F  E  S  F  W  I  P  *  F  S  W  L  S  F  P  T  S  G  K  N  I  I  C  S  N  S  S  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0042B19.2" strand="+"/>
                <serials PGL_serial="5" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="65733" stop="66128"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>393</number_coding_nucleotides>
                  <number_encoded_amino_acids>131</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HFLLYLLRRRRRKLKMGETGEASAISFPSLTIPPRPSFESFFNMSSFSPGPMSLVSSFLSDQSPDSADCPPSFSQLLAGYEYSGDPPGCQKNSGYNQNGSVNPQLFVIPSGLSPSGFLNSPGFLSPLQVKI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="69435" PGL_stop="72924"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="69435" e_stop="70046"/>
            <exon e_start="72430" e_stop="72714"/>
            <exon e_start="72852" e_stop="72924"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.965" acc_prob="0.992" e_score="0.997"/>
          <exon-intron don_prob="0.974" acc_prob="0.864" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="69435" e_stop="70046" e_length="612"/>
          </exon>
          <intron i_serial="1" don_prob="0.965" acc_prob="0.992">
            <gDNA_intron_boundary i_start="70047" i_stop="72429" i_length="2383"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="72430" e_stop="72714" e_length="285"/>
          </exon>
          <intron i_serial="2" don_prob="0.974" acc_prob="0.864">
            <gDNA_intron_boundary i_start="72715" i_stop="72851" i_length="137"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="72852" e_stop="72924" e_length="73"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69435" stop="70046"/>
              <exon start="72430" stop="72645"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E735877" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69437" stop="70046"/>
              <exon start="72430" stop="72595"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E740899" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69437" stop="70046"/>
              <exon start="72430" stop="72578"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E736643" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69576" stop="70046"/>
              <exon start="72430" stop="72477"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331051" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69628" stop="69872"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E395024" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69629" stop="70046"/>
              <exon start="72430" stop="72687"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E330781" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69965" stop="70046"/>
              <exon start="72430" stop="72714"/>
              <exon start="72852" stop="72924"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331314" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTCCGCATAACACGCAAAGAAAAGAGAAGGAATCCCATCTCTCTGTTCTTCTCCACCTCAAACTATTACCTCTTTTCTCAGATCAATTTTATGAAAACAATTTTTTTTTTGCAGATACAATGAGCTAATTTGGGGAGAGACCCTTTTTCCCGCACCCATTATTTTCACCTCCCTTGACCCGTTGAATCATACGGGTCGATCTGGGTCTCTCCCAACTGGATCGAATTCATTTATGGGTTTTGGGGGGTCATGGGTTGCGTCAGCTCCAAGCAGGCCACGTCCCATTCCCCGCCCCACGATTCGTCGGTGAATGTTGCCGGTGTCGACAATGTCGATCCATTATTGCATATTGGATTTGCCCCTTTGGAGAAGATCAAAGAGGAGCCTGAGAAAGAGGGAGAGGATTCCGTTAGACGATTTTCGGGGAAATTGAGAGCATCCAAGAAGGGAAATTCTGATAAGAAGGCGGCTAGTTTTAGCATCAAATTTGGAAGGTTAACTGAAGGTGAACATTTGGCCGCCGGATGGCCTGTTTGGCTGACTGCCGTTGCCGGTGAAGCTATTGATGGATGGATGCCTCTGAAATCAAACATGTTCCAGAAATTAGAAAAG : ATTGGACAAGGTACATATAGCAGTGTTTACCGAGCACGTGATATTGGAAATGGTAAAATGGTCGCCCTGAAGAAGGTGCGATTTGACAATTTCCAACCAGATAGTGTCAGATTTATGGCACGAGAAATTGCAATTCTCCGCAAACTTGACCATCCAAACATTATGAAGCTGGAAGGGATAATCACTTCTCGGTTATCATGTAGCATTTACCTTGTTTTCGAGTATATGGAACATGACCTATCTGGATTGTTATCATGTCCTGACATCAAATTTAGTGATTCGCAG : ATCAAATGCTACATGCAGCAGCTTCTGAGCGGACTAGAGCACTGCCATTCACGAGGGATAATGCATCGGGATA</gDNA_template>
            <first_frame> L  R  I  T  R  K  E  K  R  R  N  P  I  S  L  F  F  S  T  S  N  Y  Y  L  F  S  Q  I  N  F  M  K  T  I  F  F  L  Q  I  Q  *  A  N  L  G  R  D  P  F  S  R  T  H  Y  F  H  L  P  *  P  V  E  S  Y  G  S  I  W  V  S  P  N  W  I  E  F  I  Y  G  F  W  G  V  M  G  C  V  S  S  K  Q  A  T  S  H  S  P  P  H  D  S  S  V  N  V  A  G  V  D  N  V  D  P  L  L  H  I  G  F  A  P  L  E  K  I  K  E  E  P  E  K  E  G  E  D  S  V  R  R  F  S  G  K  L  R  A  S  K  K  G  N  S  D  K  K  A  A  S  F  S  I  K  F  G  R  L  T  E  G  E  H  L  A  A  G  W  P  V  W  L  T  A  V  A  G  E  A  I  D  G  W  M  P  L  K  S  N  M  F  Q  K  L  E  K  :  I  G  Q  G  T  Y  S  S  V  Y  R  A  R  D  I  G  N  G  K  M  V  A  L  K  K  V  R  F  D  N  F  Q  P  D  S  V  R  F  M  A  R  E  I  A  I  L  R  K  L  D  H  P  N  I  M  K  L  E  G  I  I  T  S  R  L  S  C  S  I  Y  L  V  F  E  Y  M  E  H  D  L  S  G  L  L  S  C  P  D  I  K  F  S  D  S  Q  :  I  K  C  Y  M  Q  Q  L  L  S  G  L  E  H  C  H  S  R  G  I  M  H  R  D  </first_frame>
            <second_frame>  S  A  *  H  A  K  K  R  E  G  I  P  S  L  C  S  S  P  P  Q  T  I  T  S  F  L  R  S  I  L  *  K  Q  F  F  F  C  R  Y  N  E  L  I  W  G  E  T  L  F  P  A  P  I  I  F  T  S  L  D  P  L  N  H  T  G  R  S  G  S  L  P  T  G  S  N  S  F  M  G  F  G  G  S  W  V  A  S  A  P  S  R  P  R  P  I  P  R  P  T  I  R  R  *  M  L  P  V  S  T  M  S  I  H  Y  C  I  L  D  L  P  L  W  R  R  S  K  R  S  L  R  K  R  E  R  I  P  L  D  D  F  R  G  N  *  E  H  P  R  R  E  I  L  I  R  R  R  L  V  L  A  S  N  L  E  G  *  L  K  V  N  I  W  P  P  D  G  L  F  G  *  L  P  L  P  V  K  L  L  M  D  G  C  L  *  N  Q  T  C  S  R  N  *  K  R :   L  D  K  V  H  I  A  V  F  T  E  H  V  I  L  E  M  V  K  W  S  P  *  R  R  C  D  L  T  I  S  N  Q  I  V  S  D  L  W  H  E  K  L  Q  F  S  A  N  L  T  I  Q  T  L  *  S  W  K  G  *  S  L  L  G  Y  H  V  A  F  T  L  F  S  S  I  W  N  M  T  Y  L  D  C  Y  H  V  L  T  S  N  L  V  I  R  R :   S  N  A  T  C  S  S  F  *  A  D  *  S  T  A  I  H  E  G  *  C  I  G  I </second_frame>
            <third_frame>   P  H  N  T  Q  R  K  E  K  E  S  H  L  S  V  L  L  H  L  K  L  L  P  L  F  S  D  Q  F  Y  E  N  N  F  F  F  A  D  T  M  S  *  F  G  E  R  P  F  F  P  H  P  L  F  S  P  P  L  T  R  *  I  I  R  V  D  L  G  L  S  Q  L  D  R  I  H  L  W  V  L  G  G  H  G  L  R  Q  L  Q  A  G  H  V  P  F  P  A  P  R  F  V  G  E  C  C  R  C  R  Q  C  R  S  I  I  A  Y  W  I  C  P  F  G  E  D  Q  R  G  A  *  E  R  G  R  G  F  R  *  T  I  F  G  E  I  E  S  I  Q  E  G  K  F  *  *  E  G  G  *  F  *  H  Q  I  W  K  V  N  *  R  *  T  F  G  R  R  M  A  C  L  A  D  C  R  C  R  *  S  Y  *  W  M  D  A  S  E  I  K  H  V  P  E  I  R  K   : D  W  T  R  Y  I  *  Q  C  L  P  S  T  *  Y  W  K  W  *  N  G  R  P  E  E  G  A  I  *  Q  F  P  T  R  *  C  Q  I  Y  G  T  R  N  C  N  S  P  Q  T  *  P  S  K  H  Y  E  A  G  R  D  N  H  F  S  V  I  M  *  H  L  P  C  F  R  V  Y  G  T  *  P  I  W  I  V  I  M  S  *  H  Q  I  *  *  F  A   : D  Q  M  L  H  A  A  A  S  E  R  T  R  A  L  P  F  T  R  D  N  A  S  G   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0042B19.2" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="69612" stop="70046"/>
                    <exon start="72430" stop="72714"/>
                    <exon start="72852" stop="72923"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>792</number_coding_nucleotides>
                  <number_encoded_amino_acids>264</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PVESYGSIWVSPNWIEFIYGFWGVMGCVSSKQATSHSPPHDSSVNVAGVDNVDPLLHIGFAPLEKIKEEPEKEGEDSVRRFSGKLRASKKGNSDKKAASFSIKFGRLTEGEHLAAGWPVWLTAVAGEAIDGWMPLKSNMFQKLEKIGQGTYSSVYRARDIGNGKMVALKKVRFDNFQPDSVRFMAREIAILRKLDHPNIMKLEGIITSRLSCSIYLVFEYMEHDLSGLLSCPDIKFSDSQIKCYMQQLLSGLEHCHSRGIMHRD</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="73015" PGL_stop="74596"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="73015" e_stop="73169"/>
            <exon e_start="73394" e_stop="73621"/>
            <exon e_start="73843" e_stop="73940"/>
            <exon e_start="74254" e_stop="74362"/>
            <exon e_start="74449" e_stop="74596"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.986" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.100" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.727" e_score="1.000"/>
          <exon-intron don_prob="0.879" acc_prob="0.923" e_score="1.000"/>
          <exon-only e_score="0.986"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="73015" e_stop="73169" e_length="155"/>
          </exon>
          <intron i_serial="1" don_prob="0.986" acc_prob="0.999">
            <gDNA_intron_boundary i_start="73170" i_stop="73393" i_length="224"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="73394" e_stop="73621" e_length="228"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.100">
            <gDNA_intron_boundary i_start="73622" i_stop="73842" i_length="221"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="73843" e_stop="73940" e_length="98"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.727">
            <gDNA_intron_boundary i_start="73941" i_stop="74253" i_length="313"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="74254" e_stop="74362" e_length="109"/>
          </exon>
          <intron i_serial="4" don_prob="0.879" acc_prob="0.923">
            <gDNA_intron_boundary i_start="74363" i_stop="74448" i_length="86"/>
          </intron>
          <exon e_serial="5" e_score="0.986">
            <gDNA_exon_boundary e_start="74449" e_stop="74596" e_length="148"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73015" stop="73169"/>
              <exon start="73394" stop="73621"/>
              <exon start="73843" stop="73940"/>
              <exon start="74254" stop="74362"/>
              <exon start="74449" stop="74596"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E314347" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AACCACTGACCAGTCGTGTGGTTACATTATGGTATCGACCTCCTGAACTACTATTGGGATCAACAAGTTATGGAGTCACTGTGGATTTGTGGAGTGTTGGTTGCGTTTTTGCTGAACTCTTTTTCGGAAGGCCACTCCTGAAAGGGAGGACTGAG : GTTGAACAACTGCACAAAATTTTCAAACTCTGTGGTTCCCCACCCGAAGATTACTGGAAAAGGTCTAAACTTCCACTTGCAACCATGTTCAAACCAAAGCAACCATATGACAGTACACTTCGAGATAGATGTAAAGAATTACCAAAAAGTGCTGTAAACCTTATTGAAACACTTATTTCAATAGATCCTCATAAACGTGGAACTGCTTCATCTGCTCTCAATTCTGAG : TATTTCAATACCAAGCCTTATGCTTGTGACTCGTCAAGCCTGCCAAAGTACCCACCGAACAAGGAAATTGATGCAAAGTTCAGGGAAGAAGCGAGAAG : AAAGAGAGCCAGTTCCACAGTGCAAACATCGGAAACTTCTAAAAATTCAAGAAAATCCAGGAAAGGTCTTCAAGAACCAAACAATTTCTGCAAAGTTGTTCCAACAGAG : GAAGTTGAGGCAAATGTTCATGGTTCTCATAGAAATTACGGTAGTAATGCACAGATATCTAAAGGAAGACGAGCTACTGTCTCACGGATATCAATGAAGCCATTGTATGACACAGTATCAGACGCTGCTTCTCAGATGACTGATGAGT</gDNA_template>
            <first_frame> N  H  *  P  V  V  W  L  H  Y  G  I  D  L  L  N  Y  Y  W  D  Q  Q  V  M  E  S  L  W  I  C  G  V  L  V  A  F  L  L  N  S  F  S  E  G  H  S  *  K  G  G  L  R :   L  N  N  C  T  K  F  S  N  S  V  V  P  H  P  K  I  T  G  K  G  L  N  F  H  L  Q  P  C  S  N  Q  S  N  H  M  T  V  H  F  E  I  D  V  K  N  Y  Q  K  V  L  *  T  L  L  K  H  L  F  Q  *  I  L  I  N  V  E  L  L  H  L  L  S  I  L  S :   I  S  I  P  S  L  M  L  V  T  R  Q  A  C  Q  S  T  H  R  T  R  K  L  M  Q  S  S  G  K  K  R  E   : E  R  E  P  V  P  Q  C  K  H  R  K  L  L  K  I  Q  E  N  P  G  K  V  F  K  N  Q  T  I  S  A  K  L  F  Q  Q  R :   K  L  R  Q  M  F  M  V  L  I  E  I  T  V  V  M  H  R  Y  L  K  E  D  E  L  L  S  H  G  Y  Q  *  S  H  C  M  T  Q  Y  Q  T  L  L  L  R  *  L  M  S </first_frame>
            <second_frame>  T  T  D  Q  S  C  G  Y  I  M  V  S  T  S  *  T  T  I  G  I  N  K  L  W  S  H  C  G  F  V  E  C  W  L  R  F  C  *  T  L  F  R  K  A  T  P  E  R  E  D  *   : G  *  T  T  A  Q  N  F  Q  T  L  W  F  P  T  R  R  L  L  E  K  V  *  T  S  T  C  N  H  V  Q  T  K  A  T  I  *  Q  Y  T  S  R  *  M  *  R  I  T  K  K  C  C  K  P  Y  *  N  T  Y  F  N  R  S  S  *  T  W  N  C  F  I  C  S  Q  F  *   : V  F  Q  Y  Q  A  L  C  L  *  L  V  K  P  A  K  V  P  T  E  Q  G  N  *  C  K  V  Q  G  R  S  E  K  :  K  E  S  Q  F  H  S  A  N  I  G  N  F  *  K  F  K  K  I  Q  E  R  S  S  R  T  K  Q  F  L  Q  S  C  S  N  R   : G  S  *  G  K  C  S  W  F  S  *  K  L  R  *  *  C  T  D  I  *  R  K  T  S  Y  C  L  T  D  I  N  E  A  I  V  *  H  S  I  R  R  C  F  S  D  D  *  *   </second_frame>
            <third_frame>   P  L  T  S  R  V  V  T  L  W  Y  R  P  P  E  L  L  L  G  S  T  S  Y  G  V  T  V  D  L  W  S  V  G  C  V  F  A  E  L  F  F  G  R  P  L  L  K  G  R  T  E  :  V  E  Q  L  H  K  I  F  K  L  C  G  S  P  P  E  D  Y  W  K  R  S  K  L  P  L  A  T  M  F  K  P  K  Q  P  Y  D  S  T  L  R  D  R  C  K  E  L  P  K  S  A  V  N  L  I  E  T  L  I  S  I  D  P  H  K  R  G  T  A  S  S  A  L  N  S  E  :  Y  F  N  T  K  P  Y  A  C  D  S  S  S  L  P  K  Y  P  P  N  K  E  I  D  A  K  F  R  E  E  A  R  R :   K  R  A  S  S  T  V  Q  T  S  E  T  S  K  N  S  R  K  S  R  K  G  L  Q  E  P  N  N  F  C  K  V  V  P  T  E  :  E  V  E  A  N  V  H  G  S  H  R  N  Y  G  S  N  A  Q  I  S  K  G  R  R  A  T  V  S  R  I  S  M  K  P  L  Y  D  T  V  S  D  A  A  S  Q  M  T  D  E  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0042B19.2" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="73017" stop="73169"/>
                    <exon start="73394" stop="73621"/>
                    <exon start="73843" stop="73940"/>
                    <exon start="74254" stop="74362"/>
                    <exon start="74449" stop="74595"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>735</number_coding_nucleotides>
                  <number_encoded_amino_acids>245</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PLTSRVVTLWYRPPELLLGSTSYGVTVDLWSVGCVFAELFFGRPLLKGRTEVEQLHKIFKLCGSPPEDYWKRSKLPLATMFKPKQPYDSTLRDRCKELPKSAVNLIETLISIDPHKRGTASSALNSEYFNTKPYACDSSSLPKYPPNKEIDAKFREEARRKRASSTVQTSETSKNSRKSRKGLQEPNNFCKVVPTEEVEANVHGSHRNYGSNAQISKGRRATVSRISMKPLYDTVSDAASQMTDE</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="75679" PGL_stop="76313"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="75679" e_stop="75783"/>
            <exon e_start="75906" e_stop="76313"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.994" acc_prob="0.984" e_score="0.962"/>
          <exon-only e_score="0.978"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.962">
            <gDNA_exon_boundary e_start="75679" e_stop="75783" e_length="105"/>
          </exon>
          <intron i_serial="1" don_prob="0.994" acc_prob="0.984">
            <gDNA_intron_boundary i_start="75784" i_stop="75905" i_length="122"/>
          </intron>
          <exon e_serial="2" e_score="0.978">
            <gDNA_exon_boundary e_start="75906" e_stop="76313" e_length="408"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75679" stop="75783"/>
              <exon start="75906" stop="76313"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E395023" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAAGGGTTGGGTTCTCCGGGCCCTTGTTATCTCAGTCCCAGACGTTTGACTCGAAGAAGGATAGTCAAACTCGAAAAGCTGGTCGTAGGTCCCGATTCTATGGAG : ATATATAATTGGAATGGCTAAGAGGACTTTGTGTCTCTCTTGTTGGTACCTCAAAGTTCATCGAAGGTTTTGGTATCGATCCTTGCAGTGAATGTTCTTACATATCTTCAGGAAGCTGGTGAAGAAATCATGCATAAGATGCAAGTTCACATCATAGAAATCAAAAGGGATAAGCCAGAATATTGATGCTCAAAGTGGTTTGCAAATTTCATTAACAGATTGGAGAACATTGAAATGCTCACCTTTTGCTATCCAAACTTGATTTTACAATCTCTTTTTTCTTTTTATTTGCTTTTCATAGTTTGTATTTTACATGTTTAGCTCATTTCTTATACAGCTTTCACATTATTTTTGTATATATATATCATGGGCAAAGAGGGTATGATTTATTACAGAGTTTTCTTTACT</gDNA_template>
            <first_frame> E  G  L  G  S  P  G  P  C  Y  L  S  P  R  R  L  T  R  R  R  I  V  K  L  E  K  L  V  V  G  P  D  S  M  E  :  I  Y  N  W  N  G  *  E  D  F  V  S  L  L  L  V  P  Q  S  S  S  K  V  L  V  S  I  L  A  V  N  V  L  T  Y  L  Q  E  A  G  E  E  I  M  H  K  M  Q  V  H  I  I  E  I  K  R  D  K  P  E  Y  *  C  S  K  W  F  A  N  F  I  N  R  L  E  N  I  E  M  L  T  F  C  Y  P  N  L  I  L  Q  S  L  F  S  F  Y  L  L  F  I  V  C  I  L  H  V  *  L  I  S  Y  T  A  F  T  L  F  L  Y  I  Y  I  M  G  K  E  G  M  I  Y  Y  R  V  F  F  T </first_frame>
            <second_frame>  K  G  W  V  L  R  A  L  V  I  S  V  P  D  V  *  L  E  E  G  *  S  N  S  K  S  W  S  *  V  P  I  L  W  R :   Y  I  I  G  M  A  K  R  T  L  C  L  S  C  W  Y  L  K  V  H  R  R  F  W  Y  R  S  L  Q  *  M  F  L  H  I  F  R  K  L  V  K  K  S  C  I  R  C  K  F  T  S  *  K  S  K  G  I  S  Q  N  I  D  A  Q  S  G  L  Q  I  S  L  T  D  W  R  T  L  K  C  S  P  F  A  I  Q  T  *  F  Y  N  L  F  F  L  F  I  C  F  S  *  F  V  F  Y  M  F  S  S  F  L  I  Q  L  S  H  Y  F  C  I  Y  I  S  W  A  K  R  V  *  F  I  T  E  F  S  L   </second_frame>
            <third_frame>   R  V  G  F  S  G  P  L  L  S  Q  S  Q  T  F  D  S  K  K  D  S  Q  T  R  K  A  G  R  R  S  R  F  Y  G   : D  I  *  L  E  W  L  R  G  L  C  V  S  L  V  G  T  S  K  F  I  E  G  F  G  I  D  P  C  S  E  C  S  Y  I  S  S  G  S  W  *  R  N  H  A  *  D  A  S  S  H  H  R  N  Q  K  G  *  A  R  I  L  M  L  K  V  V  C  K  F  H  *  Q  I  G  E  H  *  N  A  H  L  L  L  S  K  L  D  F  T  I  S  F  F  F  L  F  A  F  H  S  L  Y  F  T  C  L  A  H  F  L  Y  S  F  H  I  I  F  V  Y  I  Y  H  G  Q  R  G  Y  D  L  L  Q  S  F  L  Y  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLm0042B19.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="79287" PGL_stop="77694"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="79287" e_stop="79255"/>
            <exon e_start="78670" e_stop="78476"/>
            <exon e_start="78366" e_stop="78244"/>
            <exon e_start="78114" e_stop="77694"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.982" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.974" e_score="0.995"/>
          <exon-intron don_prob="0.918" acc_prob="0.992" e_score="1.000"/>
          <exon-only e_score="0.962"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="79287" e_stop="79255" e_length="33"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.982">
            <gDNA_intron_boundary i_start="79254" i_stop="78671" i_length="584"/>
          </intron>
          <exon e_serial="2" e_score="0.995">
            <gDNA_exon_boundary e_start="78670" e_stop="78476" e_length="195"/>
          </exon>
          <intron i_serial="2" don_prob="0.993" acc_prob="0.974">
            <gDNA_intron_boundary i_start="78475" i_stop="78367" i_length="109"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="78366" e_stop="78244" e_length="123"/>
          </exon>
          <intron i_serial="3" don_prob="0.918" acc_prob="0.992">
            <gDNA_intron_boundary i_start="78243" i_stop="78115" i_length="129"/>
          </intron>
          <exon e_serial="4" e_score="0.962">
            <gDNA_exon_boundary e_start="78114" e_stop="77694" e_length="421"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79287" stop="79255"/>
              <exon start="78670" stop="78476"/>
              <exon start="78366" stop="78244"/>
              <exon start="78114" stop="77694"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E547817" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GACGTCTCTCCTCAGTTCCTGGAAAGCATCAAG : AAACTTATCGATGATGATATGGAGAAGGTTAAAGGATTTGCAAAAGATTCAATAGTTCCTTTCAGAGAGAGGTTGAAAATAATGGTTGGGGCGGTTAATCCAGAAGATCTTGTTTCCAGTTCAACTGAAAGGAAGCTTTTGAATAGTTACAACGAGAAACCTGTGCTTTCCCGTCCTCAACACAGCTTTTATGAG : GGCTCAAATTACTTTGAGATTGATCTTGACATTCATCGCTTCAGCTACATAGCAAGAAGGGGACTTGATGCATTCAGAGATCGTTTACAACATGGCATATTGGATCTTGGTCTAACAATTCAG : GCACAAAAGCCGGAGGAGCTGCCCGAGCAAGTTCTTGCTTGTGTGAGATTGAACAAGATTGATTTTGTTGACAATGGACAAATTCCAACTCTTCTGAGCATTGAGGAAGATAATTGTTCATACTAATTTATACAAAATCAGTGATACATTTGCATATTGCATGGGGGAGTTTTCAAATGGTCCCTTGATGATCAAGCAATTCCAACTTTCTATACAAGCAAAAAAAAAAAAAACATTGTATAATAAGAAATTGTATTCTGAAAGATGAAATTTTTAAAAAAAGGTGATCATGTTGATACTAAGGTCCACCATTTTTCAACTGATCACACCCCTAACATAATTTAGTACTAATAAGAAAAAACCAATATCACTTAGCATTTACTTTATTTAAGATATTGTATATATTTTGAGAAGGCAATTG</gDNA_template>
            <first_frame> D  V  S  P  Q  F  L  E  S  I  K  :  K  L  I  D  D  D  M  E  K  V  K  G  F  A  K  D  S  I  V  P  F  R  E  R  L  K  I  M  V  G  A  V  N  P  E  D  L  V  S  S  S  T  E  R  K  L  L  N  S  Y  N  E  K  P  V  L  S  R  P  Q  H  S  F  Y  E  :  G  S  N  Y  F  E  I  D  L  D  I  H  R  F  S  Y  I  A  R  R  G  L  D  A  F  R  D  R  L  Q  H  G  I  L  D  L  G  L  T  I  Q  :  A  Q  K  P  E  E  L  P  E  Q  V  L  A  C  V  R  L  N  K  I  D  F  V  D  N  G  Q  I  P  T  L  L  S  I  E  E  D  N  C  S  Y  *  F  I  Q  N  Q  *  Y  I  C  I  L  H  G  G  V  F  K  W  S  L  D  D  Q  A  I  P  T  F  Y  T  S  K  K  K  K  N  I  V  *  *  E  I  V  F  *  K  M  K  F  L  K  K  G  D  H  V  D  T  K  V  H  H  F  S  T  D  H  T  P  N  I  I  *  Y  *  *  E  K  T  N  I  T  *  H  L  L  Y  L  R  Y  C  I  Y  F  E  K  A  I  </first_frame>
            <second_frame>  T  S  L  L  S  S  W  K  A  S  R :   N  L  S  M  M  I  W  R  R  L  K  D  L  Q  K  I  Q  *  F  L  S  E  R  G  *  K  *  W  L  G  R  L  I  Q  K  I  L  F  P  V  Q  L  K  G  S  F  *  I  V  T  T  R  N  L  C  F  P  V  L  N  T  A  F  M  R :   A  Q  I  T  L  R  L  I  L  T  F  I  A  S  A  T  *  Q  E  G  D  L  M  H  S  E  I  V  Y  N  M  A  Y  W  I  L  V  *  Q  F  R :   H  K  S  R  R  S  C  P  S  K  F  L  L  V  *  D  *  T  R  L  I  L  L  T  M  D  K  F  Q  L  F  *  A  L  R  K  I  I  V  H  T  N  L  Y  K  I  S  D  T  F  A  Y  C  M  G  E  F  S  N  G  P  L  M  I  K  Q  F  Q  L  S  I  Q  A  K  K  K  K  T  L  Y  N  K  K  L  Y  S  E  R  *  N  F  *  K  K  V  I  M  L  I  L  R  S  T  I  F  Q  L  I  T  P  L  T  *  F  S  T  N  K  K  K  P  I  S  L  S  I  Y  F  I  *  D  I  V  Y  I  L  R  R  Q  L </second_frame>
            <third_frame>   R  L  S  S  V  P  G  K  H  Q   : E  T  Y  R  *  *  Y  G  E  G  *  R  I  C  K  R  F  N  S  S  F  Q  R  E  V  E  N  N  G  W  G  G  *  S  R  R  S  C  F  Q  F  N  *  K  E  A  F  E  *  L  Q  R  E  T  C  A  F  P  S  S  T  Q  L  L  *   : G  L  K  L  L  *  D  *  S  *  H  S  S  L  Q  L  H  S  K  K  G  T  *  C  I  Q  R  S  F  T  T  W  H  I  G  S  W  S  N  N  S   : G  T  K  A  G  G  A  A  R  A  S  S  C  L  C  E  I  E  Q  D  *  F  C  *  Q  W  T  N  S  N  S  S  E  H  *  G  R  *  L  F  I  L  I  Y  T  K  S  V  I  H  L  H  I  A  W  G  S  F  Q  M  V  P  *  *  S  S  N  S  N  F  L  Y  K  Q  K  K  K  K  H  C  I  I  R  N  C  I  L  K  D  E  I  F  K  K  R  *  S  C  *  Y  *  G  P  P  F  F  N  *  S  H  P  *  H  N  L  V  L  I  R  K  N  Q  Y  H  L  A  F  T  L  F  K  I  L  Y  I  F  *  E  G  N   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0042B19.2" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="79287" stop="79255"/>
                    <exon start="78670" stop="78476"/>
                    <exon start="78366" stop="78244"/>
                    <exon start="78114" stop="77989"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>474</number_coding_nucleotides>
                  <number_encoded_amino_acids>158</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DVSPQFLESIKKLIDDDMEKVKGFAKDSIVPFRERLKIMVGAVNPEDLVSSSTERKLLNSYNEKPVLSRPQHSFYEGSNYFEIDLDIHRFSYIARRGLDAFRDRLQHGILDLGLTIQAQKPEELPEQVLACVRLNKIDFVDNGQIPTLLSIEEDNCSY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="-" PGL_start="82726" PGL_stop="79810"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="82726" e_stop="82509"/>
            <exon e_start="81605" e_stop="81564"/>
            <exon e_start="81324" e_stop="80991"/>
            <exon e_start="80685" e_stop="80602"/>
            <exon e_start="80180" e_stop="80100"/>
            <exon e_start="79863" e_stop="79810"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.410" e_score="1.000"/>
          <exon-intron don_prob="0.866" acc_prob="0.976" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.954" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.168" e_score="1.000"/>
          <exon-intron don_prob="0.977" acc_prob="0.318" e_score="0.988"/>
          <exon-only e_score="0.963"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="82726" e_stop="82509" e_length="218"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.410">
            <gDNA_intron_boundary i_start="82508" i_stop="81606" i_length="903"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="81605" e_stop="81564" e_length="42"/>
          </exon>
          <intron i_serial="2" don_prob="0.866" acc_prob="0.976">
            <gDNA_intron_boundary i_start="81563" i_stop="81325" i_length="239"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="81324" e_stop="80991" e_length="334"/>
          </exon>
          <intron i_serial="3" don_prob="0.993" acc_prob="0.954">
            <gDNA_intron_boundary i_start="80990" i_stop="80686" i_length="305"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="80685" e_stop="80602" e_length="84"/>
          </exon>
          <intron i_serial="4" don_prob="0.997" acc_prob="0.168">
            <gDNA_intron_boundary i_start="80601" i_stop="80181" i_length="421"/>
          </intron>
          <exon e_serial="5" e_score="0.988">
            <gDNA_exon_boundary e_start="80180" e_stop="80100" e_length="81"/>
          </exon>
          <intron i_serial="5" don_prob="0.977" acc_prob="0.318">
            <gDNA_intron_boundary i_start="80099" i_stop="79864" i_length="236"/>
          </intron>
          <exon e_serial="6" e_score="0.963">
            <gDNA_exon_boundary e_start="79863" e_stop="79810" e_length="54"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82726" stop="82509"/>
              <exon start="81605" stop="81564"/>
              <exon start="81324" stop="80991"/>
              <exon start="80685" stop="80632"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E334599" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82708" stop="82509"/>
              <exon start="81605" stop="81564"/>
              <exon start="81324" stop="80991"/>
              <exon start="80685" stop="80602"/>
              <exon start="80180" stop="80100"/>
              <exon start="79863" stop="79822"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E334289" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82699" stop="82509"/>
              <exon start="81605" stop="81564"/>
              <exon start="81324" stop="80991"/>
              <exon start="80685" stop="80602"/>
              <exon start="80180" stop="80100"/>
              <exon start="79863" stop="79810"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E547785" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82698" stop="82509"/>
              <exon start="81605" stop="81564"/>
              <exon start="81324" stop="80992"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E362415" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82688" stop="82509"/>
              <exon start="81605" stop="81564"/>
              <exon start="81324" stop="81241"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E359618" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82676" stop="82509"/>
              <exon start="81605" stop="81564"/>
              <exon start="81324" stop="80991"/>
              <exon start="80685" stop="80612"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E330473" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82676" stop="82509"/>
              <exon start="81605" stop="81564"/>
              <exon start="81324" stop="80991"/>
              <exon start="80685" stop="80623"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E330437" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGAAAAAAAACAAAAAAAAAATTAGTTGTGTGTATATATATATATATATAAATAATAAGATCAGTTGGTAAACAGAGCAGGTGCGGAAGTGTGCTTGGATCCGGCGTCGGAGCCCACACTTCCTCTTCCTATTCTCTGTATTCCTCCATTTTTTTTTCTTTTATACTTTCAACAGAAAGAGCCGAAGACGCTGCCTTCGTTCTTCCTTCACTATCAAG : ATTGATGATGCTTAATTTTGGAACTTTTACTTAATTCTGAGA : GTATCCGTATTTCTTGTGTTCCACCTGGAAGTGGTGTCTCGTATGGGATAGTATTGATTGGCAGAAAAATTTGTCACCTGAGTCAGAGGAATGGGTGCTTGTGTATCAACTCCAGCAATTCCAATCAAAATGAGGAGGAAACTTCCTGGTCGCCCTAGAAAGTACCATGGAAAGAACTCAAAATCTGCTTCGAAAATAAATGGTGATGCAGGATCAATGGTTACAGATATTGAGTTTGTTCACAAAACTACGACCTGCAGAAGATCTGAGTGCTCCAATTCTAAAGTTCATGTTACTCAGATGCAGTGGCACCATAGTCAAATAGATGCAAATG : TTCTTTGCCAGGAGGATGCATGGTTTGACACAGTCAGCATTTTTGAGTCTGACTCAGATGATGAATTCAGTAGTGTTAATGGAG : GTCGAGTTTCTCAAGTAAGGAAATCAACAATTATAAGGCTCTCTCTGAGAACATCTGTTGAAGAAGAAAAAAGTGGATTTC : GTGCACCAAGAAAGTATCTTTTGCGTCCCAGGGCTGGGCTCATTGTTCCTCATT</gDNA_template>
            <first_frame> R  K  K  T  K  K  K  L  V  V  C  I  Y  I  Y  I  *  I  I  R  S  V  G  K  Q  S  R  C  G  S  V  L  G  S  G  V  G  A  H  T  S  S  S  Y  S  L  Y  S  S  I  F  F  S  F  I  L  S  T  E  R  A  E  D  A  A  F  V  L  P  S  L  S  R :   L  M  M  L  N  F  G  T  F  T  *  F  *  E :   Y  P  Y  F  L  C  S  T  W  K  W  C  L  V  W  D  S  I  D  W  Q  K  N  L  S  P  E  S  E  E  W  V  L  V  Y  Q  L  Q  Q  F  Q  S  K  *  G  G  N  F  L  V  A  L  E  S  T  M  E  R  T  Q  N  L  L  R  K  *  M  V  M  Q  D  Q  W  L  Q  I  L  S  L  F  T  K  L  R  P  A  E  D  L  S  A  P  I  L  K  F  M  L  L  R  C  S  G  T  I  V  K  *  M  Q  M  :  F  F  A  R  R  M  H  G  L  T  Q  S  A  F  L  S  L  T  Q  M  M  N  S  V  V  L  M  E  :  V  E  F  L  K  *  G  N  Q  Q  L  *  G  S  L  *  E  H  L  L  K  K  K  K  V  D  F  :  V  H  Q  E  S  I  F  C  V  P  G  L  G  S  L  F  L  I </first_frame>
            <second_frame>  E  K  K  Q  K  K  N  *  L  C  V  Y  I  Y  I  Y  K  *  *  D  Q  L  V  N  R  A  G  A  E  V  C  L  D  P  A  S  E  P  T  L  P  L  P  I  L  C  I  P  P  F  F  F  L  L  Y  F  Q  Q  K  E  P  K  T  L  P  S  F  F  L  H  Y  Q   : D  *  *  C  L  I  L  E  L  L  L  N  S  E   : S  I  R  I  S  C  V  P  P  G  S  G  V  S  Y  G  I  V  L  I  G  R  K  I  C  H  L  S  Q  R  N  G  C  L  C  I  N  S  S  N  S  N  Q  N  E  E  E  T  S  W  S  P  *  K  V  P  W  K  E  L  K  I  C  F  E  N  K  W  *  C  R  I  N  G  Y  R  Y  *  V  C  S  Q  N  Y  D  L  Q  K  I  *  V  L  Q  F  *  S  S  C  Y  S  D  A  V  A  P  *  S  N  R  C  K  C :   S  L  P  G  G  C  M  V  *  H  S  Q  H  F  *  V  *  L  R  *  *  I  Q  *  C  *  W  R :   S  S  F  S  S  K  E  I  N  N  Y  K  A  L  S  E  N  I  C  *  R  R  K  K  W  I  S :   C  T  K  K  V  S  F  A  S  Q  G  W  A  H  C  S  S   </second_frame>
            <third_frame>   K  K  N  K  K  K  I  S  C  V  Y  I  Y  I  Y  I  N  N  K  I  S  W  *  T  E  Q  V  R  K  C  A  W  I  R  R  R  S  P  H  F  L  F  L  F  S  V  F  L  H  F  F  F  F  Y  T  F  N  R  K  S  R  R  R  C  L  R  S  S  F  T  I  K  :  I  D  D  A  *  F  W  N  F  Y  L  I  L  R  :  V  S  V  F  L  V  F  H  L  E  V  V  S  R  M  G  *  Y  *  L  A  E  K  F  V  T  *  V  R  G  M  G  A  C  V  S  T  P  A  I  P  I  K  M  R  R  K  L  P  G  R  P  R  K  Y  H  G  K  N  S  K  S  A  S  K  I  N  G  D  A  G  S  M  V  T  D  I  E  F  V  H  K  T  T  T  C  R  R  S  E  C  S  N  S  K  V  H  V  T  Q  M  Q  W  H  H  S  Q  I  D  A  N   : V  L  C  Q  E  D  A  W  F  D  T  V  S  I  F  E  S  D  S  D  D  E  F  S  S  V  N  G   : G  R  V  S  Q  V  R  K  S  T  I  I  R  L  S  L  R  T  S  V  E  E  E  K  S  G  F   : R  A  P  R  K  Y  L  L  R  P  R  A  G  L  I  V  P  H  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0042B19.2" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="81243" stop="80991"/>
                    <exon start="80685" stop="80602"/>
                    <exon start="80180" stop="80100"/>
                    <exon start="79863" stop="79811"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>471</number_coding_nucleotides>
                  <number_encoded_amino_acids>157</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VRGMGACVSTPAIPIKMRRKLPGRPRKYHGKNSKSASKINGDAGSMVTDIEFVHKTTTCRRSECSNSKVHVTQMQWHHSQIDANVLCQEDAWFDTVSIFESDSDDEFSSVNGGRVSQVRKSTIIRLSLRTSVEEEKSGFRAPRKYLLRPRAGLIVPH</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0042B19.2" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="82675" stop="82509"/>
                    <exon start="81605" stop="81572"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IIRSVGKQSRCGSVLGSGVGAHTSSSYSLYSSIFFSFILSTERAEDAAFVLPSLSRLMMLNFGTFT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="82726" e_stop="82509"/>
            <exon e_start="81865" e_stop="81811"/>
            <exon e_start="81605" e_stop="81564"/>
            <exon e_start="81324" e_stop="80991"/>
            <exon e_start="80685" e_stop="80602"/>
            <exon e_start="80180" e_stop="80121"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.000" e_score="0.872"/>
          <exon-intron don_prob="0.817" acc_prob="0.410" e_score="0.982"/>
          <exon-intron don_prob="0.866" acc_prob="0.976" e_score="0.881"/>
          <exon-intron don_prob="0.993" acc_prob="0.954" e_score="0.937"/>
          <exon-intron don_prob="0.997" acc_prob="0.168" e_score="0.988"/>
          <exon-only e_score="0.933"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.872">
            <gDNA_exon_boundary e_start="82726" e_stop="82509" e_length="218"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="82508" i_stop="81866" i_length="643"/>
          </intron>
          <exon e_serial="2" e_score="0.982">
            <gDNA_exon_boundary e_start="81865" e_stop="81811" e_length="55"/>
          </exon>
          <intron i_serial="2" don_prob="0.817" acc_prob="0.410">
            <gDNA_intron_boundary i_start="81810" i_stop="81606" i_length="205"/>
          </intron>
          <exon e_serial="3" e_score="0.881">
            <gDNA_exon_boundary e_start="81605" e_stop="81564" e_length="42"/>
          </exon>
          <intron i_serial="3" don_prob="0.866" acc_prob="0.976">
            <gDNA_intron_boundary i_start="81563" i_stop="81325" i_length="239"/>
          </intron>
          <exon e_serial="4" e_score="0.937">
            <gDNA_exon_boundary e_start="81324" e_stop="80991" e_length="334"/>
          </exon>
          <intron i_serial="4" don_prob="0.993" acc_prob="0.954">
            <gDNA_intron_boundary i_start="80990" i_stop="80686" i_length="305"/>
          </intron>
          <exon e_serial="5" e_score="0.988">
            <gDNA_exon_boundary e_start="80685" e_stop="80602" e_length="84"/>
          </exon>
          <intron i_serial="5" don_prob="0.997" acc_prob="0.168">
            <gDNA_intron_boundary i_start="80601" i_stop="80181" i_length="421"/>
          </intron>
          <exon e_serial="6" e_score="0.933">
            <gDNA_exon_boundary e_start="80180" e_stop="80121" e_length="60"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82726" stop="82509"/>
              <exon start="81865" stop="81811"/>
              <exon start="81605" stop="81564"/>
              <exon start="81324" stop="80991"/>
              <exon start="80685" stop="80602"/>
              <exon start="80180" stop="80121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E547818" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82725" stop="82509"/>
              <exon start="81865" stop="81811"/>
              <exon start="81605" stop="81564"/>
              <exon start="81324" stop="81245"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E364426" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81816" stop="81811"/>
              <exon start="81605" stop="81564"/>
              <exon start="81324" stop="81027"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E362097" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGAAAAAAAACAAAAAAAAAATTAGTTGTGTGTATATATATATATATATAAATAATAAGATCAGTTGGTAAACAGAGCAGGTGCGGAAGTGTGCTTGGATCCGGCGTCGGAGCCCACACTTCCTCTTCCTATTCTCTGTATTCCTCCATTTTTTTTTCTTTTATACTTTCAACAGAAAGAGCCGAAGACGCTGCCTTCGTTCTTCCTTCACTATCAAG : GGATTATTAATATCTGCATAATTCTAGTCAGCTGGCAAACGTCTTCACCTTTTCA : ATTGATGATGCTTAATTTTGGAACTTTTACTTAATTCTGAGA : GTATCCGTATTTCTTGTGTTCCACCTGGAAGTGGTGTCTCGTATGGGATAGTATTGATTGGCAGAAAAATTTGTCACCTGAGTCAGAGGAATGGGTGCTTGTGTATCAACTCCAGCAATTCCAATCAAAATGAGGAGGAAACTTCCTGGTCGCCCTAGAAAGTACCATGGAAAGAACTCAAAATCTGCTTCGAAAATAAATGGTGATGCAGGATCAATGGTTACAGATATTGAGTTTGTTCACAAAACTACGACCTGCAGAAGATCTGAGTGCTCCAATTCTAAAGTTCATGTTACTCAGATGCAGTGGCACCATAGTCAAATAGATGCAAATG : TTCTTTGCCAGGAGGATGCATGGTTTGACACAGTCAGCATTTTTGAGTCTGACTCAGATGATGAATTCAGTAGTGTTAATGGAG : GTCGAGTTTCTCAAGTAAGGAAATCAACAATTATAAGGCTCTCTCTGAGAACATCTGTTG</gDNA_template>
            <first_frame> R  K  K  T  K  K  K  L  V  V  C  I  Y  I  Y  I  *  I  I  R  S  V  G  K  Q  S  R  C  G  S  V  L  G  S  G  V  G  A  H  T  S  S  S  Y  S  L  Y  S  S  I  F  F  S  F  I  L  S  T  E  R  A  E  D  A  A  F  V  L  P  S  L  S  R :   D  Y  *  Y  L  H  N  S  S  Q  L  A  N  V  F  T  F  S  :  I  D  D  A  *  F  W  N  F  Y  L  I  L  R  :  V  S  V  F  L  V  F  H  L  E  V  V  S  R  M  G  *  Y  *  L  A  E  K  F  V  T  *  V  R  G  M  G  A  C  V  S  T  P  A  I  P  I  K  M  R  R  K  L  P  G  R  P  R  K  Y  H  G  K  N  S  K  S  A  S  K  I  N  G  D  A  G  S  M  V  T  D  I  E  F  V  H  K  T  T  T  C  R  R  S  E  C  S  N  S  K  V  H  V  T  Q  M  Q  W  H  H  S  Q  I  D  A  N   : V  L  C  Q  E  D  A  W  F  D  T  V  S  I  F  E  S  D  S  D  D  E  F  S  S  V  N  G   : G  R  V  S  Q  V  R  K  S  T  I  I  R  L  S  L  R  T  S  V  </first_frame>
            <second_frame>  E  K  K  Q  K  K  N  *  L  C  V  Y  I  Y  I  Y  K  *  *  D  Q  L  V  N  R  A  G  A  E  V  C  L  D  P  A  S  E  P  T  L  P  L  P  I  L  C  I  P  P  F  F  F  L  L  Y  F  Q  Q  K  E  P  K  T  L  P  S  F  F  L  H  Y  Q   : G  I  I  N  I  C  I  I  L  V  S  W  Q  T  S  S  P  F  Q :   L  M  M  L  N  F  G  T  F  T  *  F  *  E :   Y  P  Y  F  L  C  S  T  W  K  W  C  L  V  W  D  S  I  D  W  Q  K  N  L  S  P  E  S  E  E  W  V  L  V  Y  Q  L  Q  Q  F  Q  S  K  *  G  G  N  F  L  V  A  L  E  S  T  M  E  R  T  Q  N  L  L  R  K  *  M  V  M  Q  D  Q  W  L  Q  I  L  S  L  F  T  K  L  R  P  A  E  D  L  S  A  P  I  L  K  F  M  L  L  R  C  S  G  T  I  V  K  *  M  Q  M  :  F  F  A  R  R  M  H  G  L  T  Q  S  A  F  L  S  L  T  Q  M  M  N  S  V  V  L  M  E  :  V  E  F  L  K  *  G  N  Q  Q  L  *  G  S  L  *  E  H  L  L </second_frame>
            <third_frame>   K  K  N  K  K  K  I  S  C  V  Y  I  Y  I  Y  I  N  N  K  I  S  W  *  T  E  Q  V  R  K  C  A  W  I  R  R  R  S  P  H  F  L  F  L  F  S  V  F  L  H  F  F  F  F  Y  T  F  N  R  K  S  R  R  R  C  L  R  S  S  F  T  I  K  :  G  L  L  I  S  A  *  F  *  S  A  G  K  R  L  H  L  F   : N  *  *  C  L  I  L  E  L  L  L  N  S  E   : S  I  R  I  S  C  V  P  P  G  S  G  V  S  Y  G  I  V  L  I  G  R  K  I  C  H  L  S  Q  R  N  G  C  L  C  I  N  S  S  N  S  N  Q  N  E  E  E  T  S  W  S  P  *  K  V  P  W  K  E  L  K  I  C  F  E  N  K  W  *  C  R  I  N  G  Y  R  Y  *  V  C  S  Q  N  Y  D  L  Q  K  I  *  V  L  Q  F  *  S  S  C  Y  S  D  A  V  A  P  *  S  N  R  C  K  C :   S  L  P  G  G  C  M  V  *  H  S  Q  H  F  *  V  *  L  R  *  *  I  Q  *  C  *  W  R :   S  S  F  S  S  K  E  I  N  N  Y  K  A  L  S  E  N  I  C   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0042B19.2" strand="-"/>
                <serials PGL_serial="10" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="81243" stop="80991"/>
                    <exon start="80685" stop="80602"/>
                    <exon start="80180" stop="80122"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>396</number_coding_nucleotides>
                  <number_encoded_amino_acids>132</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VRGMGACVSTPAIPIKMRRKLPGRPRKYHGKNSKSASKINGDAGSMVTDIEFVHKTTTCRRSECSNSKVHVTQMQWHHSQIDANVLCQEDAWFDTVSIFESDSDDEFSSVNGGRVSQVRKSTIIRLSLRTSV</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0042B19.2" strand="-"/>
                <serials PGL_serial="10" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="82668" stop="82509"/>
                    <exon start="81865" stop="81811"/>
                    <exon start="81605" stop="81572"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>246</number_coding_nucleotides>
                  <number_encoded_amino_acids>82</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DQLVNRAGAEVCLDPASEPTLPLPILCIPPFFFLLYFQQKEPKTLPSFFLHYQGIINICIILVSWQTSSPFQLMMLNFGTFT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="-" PGL_start="93099" PGL_stop="88890"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="89922" e_stop="88890"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="89922" e_stop="88890" e_length="1033"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89922" stop="89337"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E235410" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89922" stop="89337"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E376854" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89922" stop="89342"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E242036" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89922" stop="89394"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E233199" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89922" stop="89695"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244776" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89913" stop="89337"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E376853" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89639" stop="88890"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540820" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GACATTGAGCAAAATGTTTGCATTGAGCGCATTGCATAATCTAAATATGAATATTATCACATATTTTAGATTCCATATACGTTGCTATAGAACCTGAGATATTTATGAAAATGATTACATGCTCTAGTGATTGAGCAGTCTTGTCAATTCTAAAAGTTGTATAGGCTCCTTATTTGAGTTGTCATTTCCTAACATGTAATGAATGTTTTTCTGCCTTTCTATGAGCGCTTCAGAGTTTGCTAAAAAAGGATAAAGAGGAGCAAAATGATCCTACAATTGCAAGTTTTCATGAGAGACTAGCCACAGCTTATCAAGATCCAGCACTGCTGCATGTCGGATATTCTGGAAATAATGCAAGTATCATTGCCCCCCTTCTTGGTACTGCTGAAGTTGATGCTTAGGGTGTAATCGAGTTATTGCTTACTGTAATCATGTAACACTTTTAGTTGGCAAACATGTGGGTATGTAGTTTGAGTTCAATCTGCTAGTCTGTATAACTCCAACTTTTTGGTTCAGTACTTTGGATAACTCCACTTTCTAGTTGACACTGTATTAGATAGTCAAAGGTATAACTTTTTACTGTCAAGAGACTTGATCAAGAATCTGCATACCAGAAAGTCCACAACTAACTATAAAGGCCTGATCCTTCAGGAACTTTAATGCCTATTTTTATTCTTATATGGAGGAACTAGAAAAGGTCAAATGTGCATCACCCCAAAGCTACTTGAATTGGTCAATTATTTGCAGTGATCATGAAGTGCAAACAATTGCATTAAAGAGATTCATATTTGTGCCTGACGTCTCCATTTGTGCGTGAGAACTTTTTGGCTTTCAGTTTTTAATGCCTTCTCGTTGGAATCTTATCAGTCCCTTTCTGAACGAATGATAATTAATGAACTATTATACATCAAGTTACATCACAAGCACTAGAAGAATTGTTAATCGTTTTGGAACTTCCATGTGGAGGATTCGGAGTGGCTGTTGACATTTCTTTTCTTGATTATGTTGAAAAAATCAGCTTTAAGCCTGACCA</gDNA_template>
            <first_frame> D  I  E  Q  N  V  C  I  E  R  I  A  *  S  K  Y  E  Y  Y  H  I  F  *  I  P  Y  T  L  L  *  N  L  R  Y  L  *  K  *  L  H  A  L  V  I  E  Q  S  C  Q  F  *  K  L  Y  R  L  L  I  *  V  V  I  S  *  H  V  M  N  V  F  L  P  F  Y  E  R  F  R  V  C  *  K  R  I  K  R  S  K  M  I  L  Q  L  Q  V  F  M  R  D  *  P  Q  L  I  K  I  Q  H  C  C  M  S  D  I  L  E  I  M  Q  V  S  L  P  P  F  L  V  L  L  K  L  M  L  R  V  *  S  S  Y  C  L  L  *  S  C  N  T  F  S  W  Q  T  C  G  Y  V  V  *  V  Q  S  A  S  L  Y  N  S  N  F  L  V  Q  Y  F  G  *  L  H  F  L  V  D  T  V  L  D  S  Q  R  Y  N  F  L  L  S  R  D  L  I  K  N  L  H  T  R  K  S  T  T  N  Y  K  G  L  I  L  Q  E  L  *  C  L  F  L  F  L  Y  G  G  T  R  K  G  Q  M  C  I  T  P  K  L  L  E  L  V  N  Y  L  Q  *  S  *  S  A  N  N  C  I  K  E  I  H  I  C  A  *  R  L  H  L  C  V  R  T  F  W  L  S  V  F  N  A  F  S  L  E  S  Y  Q  S  L  S  E  R  M  I  I  N  E  L  L  Y  I  K  L  H  H  K  H  *  K  N  C  *  S  F  W  N  F  H  V  E  D  S  E  W  L  L  T  F  L  F  L  I  M  L  K  K  S  A  L  S  L  T  </first_frame>
            <second_frame>  T  L  S  K  M  F  A  L  S  A  L  H  N  L  N  M  N  I  I  T  Y  F  R  F  H  I  R  C  Y  R  T  *  D  I  Y  E  N  D  Y  M  L  *  *  L  S  S  L  V  N  S  K  S  C  I  G  S  L  F  E  L  S  F  P  N  M  *  *  M  F  F  C  L  S  M  S  A  S  E  F  A  K  K  G  *  R  G  A  K  *  S  Y  N  C  K  F  S  *  E  T  S  H  S  L  S  R  S  S  T  A  A  C  R  I  F  W  K  *  C  K  Y  H  C  P  P  S  W  Y  C  *  S  *  C  L  G  C  N  R  V  I  A  Y  C  N  H  V  T  L  L  V  G  K  H  V  G  M  *  F  E  F  N  L  L  V  C  I  T  P  T  F  W  F  S  T  L  D  N  S  T  F  *  L  T  L  Y  *  I  V  K  G  I  T  F  Y  C  Q  E  T  *  S  R  I  C  I  P  E  S  P  Q  L  T  I  K  A  *  S  F  R  N  F  N  A  Y  F  Y  S  Y  M  E  E  L  E  K  V  K  C  A  S  P  Q  S  Y  L  N  W  S  I  I  C  S  D  H  E  V  Q  T  I  A  L  K  R  F  I  F  V  P  D  V  S  I  C  A  *  E  L  F  G  F  Q  F  L  M  P  S  R  W  N  L  I  S  P  F  L  N  E  *  *  L  M  N  Y  Y  T  S  S  Y  I  T  S  T  R  R  I  V  N  R  F  G  T  S  M  W  R  I  R  S  G  C  *  H  F  F  S  *  L  C  *  K  N  Q  L  *  A  *  P </second_frame>
            <third_frame>   H  *  A  K  C  L  H  *  A  H  C  I  I  *  I  *  I  L  S  H  I  L  D  S  I  Y  V  A  I  E  P  E  I  F  M  K  M  I  T  C  S  S  D  *  A  V  L  S  I  L  K  V  V  *  A  P  Y  L  S  C  H  F  L  T  C  N  E  C  F  S  A  F  L  *  A  L  Q  S  L  L  K  K  D  K  E  E  Q  N  D  P  T  I  A  S  F  H  E  R  L  A  T  A  Y  Q  D  P  A  L  L  H  V  G  Y  S  G  N  N  A  S  I  I  A  P  L  L  G  T  A  E  V  D  A  *  G  V  I  E  L  L  L  T  V  I  M  *  H  F  *  L  A  N  M  W  V  C  S  L  S  S  I  C  *  S  V  *  L  Q  L  F  G  S  V  L  W  I  T  P  L  S  S  *  H  C  I  R  *  S  K  V  *  L  F  T  V  K  R  L  D  Q  E  S  A  Y  Q  K  V  H  N  *  L  *  R  P  D  P  S  G  T  L  M  P  I  F  I  L  I  W  R  N  *  K  R  S  N  V  H  H  P  K  A  T  *  I  G  Q  L  F  A  V  I  M  K  C  K  Q  L  H  *  R  D  S  Y  L  C  L  T  S  P  F  V  R  E  N  F  L  A  F  S  F  *  C  L  L  V  G  I  L  S  V  P  F  *  T  N  D  N  *  *  T  I  I  H  Q  V  T  S  Q  A  L  E  E  L  L  I  V  L  E  L  P  C  G  G  F  G  V  A  V  D  I  S  F  L  D  Y  V  E  K  I  S  F  K  P  D   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLm0042B19.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="92911" e_stop="92812"/>
            <exon e_start="92707" e_stop="92431"/>
            <exon e_start="91437" e_stop="91162"/>
            <exon e_start="90704" e_stop="90471"/>
            <exon e_start="89689" e_stop="88890"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.415" acc_prob="0.935" e_score="1.000"/>
          <exon-intron don_prob="0.983" acc_prob="0.972" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.973" e_score="1.000"/>
          <exon-intron don_prob="0.956" acc_prob="0.518" e_score="1.000"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="92911" e_stop="92812" e_length="100"/>
          </exon>
          <intron i_serial="1" don_prob="0.415" acc_prob="0.935">
            <gDNA_intron_boundary i_start="92811" i_stop="92708" i_length="104"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="92707" e_stop="92431" e_length="277"/>
          </exon>
          <intron i_serial="2" don_prob="0.983" acc_prob="0.972">
            <gDNA_intron_boundary i_start="92430" i_stop="91438" i_length="993"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="91437" e_stop="91162" e_length="276"/>
          </exon>
          <intron i_serial="3" don_prob="0.986" acc_prob="0.973">
            <gDNA_intron_boundary i_start="91161" i_stop="90705" i_length="457"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="90704" e_stop="90471" e_length="234"/>
          </exon>
          <intron i_serial="4" don_prob="0.956" acc_prob="0.518">
            <gDNA_intron_boundary i_start="90470" i_stop="89690" i_length="781"/>
          </intron>
          <exon e_serial="5" e_score="0.997">
            <gDNA_exon_boundary e_start="89689" e_stop="88890" e_length="800"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92911" stop="92812"/>
              <exon start="92707" stop="92431"/>
              <exon start="91437" stop="91162"/>
              <exon start="90704" stop="90536"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E548448" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92910" stop="92812"/>
              <exon start="92707" stop="92431"/>
              <exon start="91437" stop="91308"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E291026" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91238" stop="91162"/>
              <exon start="90704" stop="90471"/>
              <exon start="89689" stop="89369"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E712486" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90683" stop="90471"/>
              <exon start="89689" stop="89324"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E366369" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89639" stop="88890"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540820" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTACAGTGCTATTTCTTATACCCGTTTTAATAGTCCAAGGGCTTACACATCTTGAGCAGTTGGAAATCTGGTTTCCCTTTTTGAAAGGATTGCTTAGAAT : AGCATTTGTTAGCCAAGTGATTACCGGATATCTTCCTAGTCTTGTACTTCAACTGTTTCTCTATGTTGTGCCATCCATAATGATTATGTTCTCATCCATACAAGGATACATTGCTATGAGCCAGATAGAGAAAAGTGCATGCATCAAAGTTCTTTGGTTTACTATATGGAACATTTTTTTTGCAAATGTGCTCTCTGGATCGGCTCTCTATCGAGTTGAAATTTTTCTTGAGCCCAAAAATATTCCTGCCATATTAGCTGTAGCAGTTCCAGGACAG : GCAACTTTCTTTATCGCCTATGTGGTTACATCTGGATGGACCAGCACTTCCTCAGAACTTTTTCAGCTGTCGACGCTCGTTTTCAATTTTATAAAGAGAAATATTTGTAGGAAATATGATGATGAGTTTGAGGTCCCTTCAGTTCCTTACCACAGTGAAATTCCCAGGATTCTTTTGTTTGGCCTCCTTGGTATAACATACTTCTTCCTTGCTCCCCTAATTCTGCCATTCCTCTTGGTTTACTACTGTCTGGGGTATCTCATCTACCGGAACCAG : CTGCTGAATGTATATGCACCCAAGTATGAGACTGGTGGAAAGTTGTGGCCTATAGTACATGATTCTATGATTTTCTCCTTGATACTGATGCATGTTATAGCCATTGGAATATTTGGGCTAAAGAAACTTCCTCTCGCTTCAAGCTTAACAGTTCCTCTTCCAATCCTTACTCTTGTGTTCAACAGCTATTGTAGGAGACGCTTCCTACCTATGTTCAAGTCTTATTCAGTCGAG : AGTTTGCTAAAAAAGGATAAAGAGGAGCAAAATGATCCTACAATTGCAAGTTTTCATGAGAGACTAGCCACAGCTTATCAAGATCCAGCACTGCTGCATGTCGGATATTCTGGAAATAATGCAAGTATCATTGCCCCCCTTCTTGGTACTGCTGAAGTTGATGCTTAGGGTGTAATCGAGTTATTGCTTACTGTAATCATGTAACACTTTTAGTTGGCAAACATGTGGGTATGTAGTTTGAGTTCAATCTGCTAGTCTGTATAACTCCAACTTTTTGGTTCAGTACTTTGGATAACTCCACTTTCTAGTTGACACTGTATTAGATAGTCAAAGGTATAACTTTTTACTGTCAAGAGACTTGATCAAGAATCTGCATACCAGAAAGTCCACAACTAACTATAAAGGCCTGATCCTTCAGGAACTTTAATGCCTATTTTTATTCTTATATGGAGGAACTAGAAAAGGTCAAATGTGCATCACCCCAAAGCTACTTGAATTGGTCAATTATTTGCAGTGATCATGAAGTGCAAACAATTGCATTAAAGAGATTCATATTTGTGCCTGACGTCTCCATTTGTGCGTGAGAACTTTTTGGCTTTCAGTTTTTAATGCCTTCTCGTTGGAATCTTATCAGTCCCTTTCTGAACGAATGATAATTAATGAACTATTATACATCAAGTTACATCACAAGCACTAGAAGAATTGTTAATCGTTTTGGAACTTCCATGTGGAGGATTCGGAGTGGCTGTTGACATTTCTTTTCTTGATTATGTTGAAAAAATCAGCTTTAAGCCTGACCA</gDNA_template>
            <first_frame> L  Q  C  Y  F  L  Y  P  F  *  *  S  K  G  L  H  I  L  S  S  W  K  S  G  F  P  F  *  K  D  C  L  E   : *  H  L  L  A  K  *  L  P  D  I  F  L  V  L  Y  F  N  C  F  S  M  L  C  H  P  *  *  L  C  S  H  P  Y  K  D  T  L  L  *  A  R  *  R  K  V  H  A  S  K  F  F  G  L  L  Y  G  T  F  F  L  Q  M  C  S  L  D  R  L  S  I  E  L  K  F  F  L  S  P  K  I  F  L  P  Y  *  L  *  Q  F  Q  D  R :   Q  L  S  L  S  P  M  W  L  H  L  D  G  P  A  L  P  Q  N  F  F  S  C  R  R  S  F  S  I  L  *  R  E  I  F  V  G  N  M  M  M  S  L  R  S  L  Q  F  L  T  T  V  K  F  P  G  F  F  C  L  A  S  L  V  *  H  T  S  S  L  L  P  *  F  C  H  S  S  W  F  T  T  V  W  G  I  S  S  T  G  T  S :   C  *  M  Y  M  H  P  S  M  R  L  V  E  S  C  G  L  *  Y  M  I  L  *  F  S  P  *  Y  *  C  M  L  *  P  L  E  Y  L  G  *  R  N  F  L  S  L  Q  A  *  Q  F  L  F  Q  S  L  L  L  C  S  T  A  I  V  G  D  A  S  Y  L  C  S  S  L  I  Q  S  R :   V  C  *  K  R  I  K  R  S  K  M  I  L  Q  L  Q  V  F  M  R  D  *  P  Q  L  I  K  I  Q  H  C  C  M  S  D  I  L  E  I  M  Q  V  S  L  P  P  F  L  V  L  L  K  L  M  L  R  V  *  S  S  Y  C  L  L  *  S  C  N  T  F  S  W  Q  T  C  G  Y  V  V  *  V  Q  S  A  S  L  Y  N  S  N  F  L  V  Q  Y  F  G  *  L  H  F  L  V  D  T  V  L  D  S  Q  R  Y  N  F  L  L  S  R  D  L  I  K  N  L  H  T  R  K  S  T  T  N  Y  K  G  L  I  L  Q  E  L  *  C  L  F  L  F  L  Y  G  G  T  R  K  G  Q  M  C  I  T  P  K  L  L  E  L  V  N  Y  L  Q  *  S  *  S  A  N  N  C  I  K  E  I  H  I  C  A  *  R  L  H  L  C  V  R  T  F  W  L  S  V  F  N  A  F  S  L  E  S  Y  Q  S  L  S  E  R  M  I  I  N  E  L  L  Y  I  K  L  H  H  K  H  *  K  N  C  *  S  F  W  N  F  H  V  E  D  S  E  W  L  L  T  F  L  F  L  I  M  L  K  K  S  A  L  S  L  T  </first_frame>
            <second_frame>  Y  S  A  I  S  Y  T  R  F  N  S  P  R  A  Y  T  S  *  A  V  G  N  L  V  S  L  F  E  R  I  A  *  N  :  S  I  C  *  P  S  D  Y  R  I  S  S  *  S  C  T  S  T  V  S  L  C  C  A  I  H  N  D  Y  V  L  I  H  T  R  I  H  C  Y  E  P  D  R  E  K  C  M  H  Q  S  S  L  V  Y  Y  M  E  H  F  F  C  K  C  A  L  W  I  G  S  L  S  S  *  N  F  S  *  A  Q  K  Y  S  C  H  I  S  C  S  S  S  R  T   : G  N  F  L  Y  R  L  C  G  Y  I  W  M  D  Q  H  F  L  R  T  F  S  A  V  D  A  R  F  Q  F  Y  K  E  K  Y  L  *  E  I  *  *  *  V  *  G  P  F  S  S  L  P  Q  *  N  S  Q  D  S  F  V  W  P  P  W  Y  N  I  L  L  P  C  S  P  N  S  A  I  P  L  G  L  L  L  S  G  V  S  H  L  P  E  P   : A  A  E  C  I  C  T  Q  V  *  D  W  W  K  V  V  A  Y  S  T  *  F  Y  D  F  L  L  D  T  D  A  C  Y  S  H  W  N  I  W  A  K  E  T  S  S  R  F  K  L  N  S  S  S  S  N  P  Y  S  C  V  Q  Q  L  L  *  E  T  L  P  T  Y  V  Q  V  L  F  S  R   : E  F  A  K  K  G  *  R  G  A  K  *  S  Y  N  C  K  F  S  *  E  T  S  H  S  L  S  R  S  S  T  A  A  C  R  I  F  W  K  *  C  K  Y  H  C  P  P  S  W  Y  C  *  S  *  C  L  G  C  N  R  V  I  A  Y  C  N  H  V  T  L  L  V  G  K  H  V  G  M  *  F  E  F  N  L  L  V  C  I  T  P  T  F  W  F  S  T  L  D  N  S  T  F  *  L  T  L  Y  *  I  V  K  G  I  T  F  Y  C  Q  E  T  *  S  R  I  C  I  P  E  S  P  Q  L  T  I  K  A  *  S  F  R  N  F  N  A  Y  F  Y  S  Y  M  E  E  L  E  K  V  K  C  A  S  P  Q  S  Y  L  N  W  S  I  I  C  S  D  H  E  V  Q  T  I  A  L  K  R  F  I  F  V  P  D  V  S  I  C  A  *  E  L  F  G  F  Q  F  L  M  P  S  R  W  N  L  I  S  P  F  L  N  E  *  *  L  M  N  Y  Y  T  S  S  Y  I  T  S  T  R  R  I  V  N  R  F  G  T  S  M  W  R  I  R  S  G  C  *  H  F  F  S  *  L  C  *  K  N  Q  L  *  A  *  P </second_frame>
            <third_frame>   T  V  L  F  L  I  P  V  L  I  V  Q  G  L  T  H  L  E  Q  L  E  I  W  F  P  F  L  K  G  L  L  R  I :   A  F  V  S  Q  V  I  T  G  Y  L  P  S  L  V  L  Q  L  F  L  Y  V  V  P  S  I  M  I  M  F  S  S  I  Q  G  Y  I  A  M  S  Q  I  E  K  S  A  C  I  K  V  L  W  F  T  I  W  N  I  F  F  A  N  V  L  S  G  S  A  L  Y  R  V  E  I  F  L  E  P  K  N  I  P  A  I  L  A  V  A  V  P  G  Q  :  A  T  F  F  I  A  Y  V  V  T  S  G  W  T  S  T  S  S  E  L  F  Q  L  S  T  L  V  F  N  F  I  K  R  N  I  C  R  K  Y  D  D  E  F  E  V  P  S  V  P  Y  H  S  E  I  P  R  I  L  L  F  G  L  L  G  I  T  Y  F  F  L  A  P  L  I  L  P  F  L  L  V  Y  Y  C  L  G  Y  L  I  Y  R  N  Q  :  L  L  N  V  Y  A  P  K  Y  E  T  G  G  K  L  W  P  I  V  H  D  S  M  I  F  S  L  I  L  M  H  V  I  A  I  G  I  F  G  L  K  K  L  P  L  A  S  S  L  T  V  P  L  P  I  L  T  L  V  F  N  S  Y  C  R  R  R  F  L  P  M  F  K  S  Y  S  V  E  :  S  L  L  K  K  D  K  E  E  Q  N  D  P  T  I  A  S  F  H  E  R  L  A  T  A  Y  Q  D  P  A  L  L  H  V  G  Y  S  G  N  N  A  S  I  I  A  P  L  L  G  T  A  E  V  D  A  *  G  V  I  E  L  L  L  T  V  I  M  *  H  F  *  L  A  N  M  W  V  C  S  L  S  S  I  C  *  S  V  *  L  Q  L  F  G  S  V  L  W  I  T  P  L  S  S  *  H  C  I  R  *  S  K  V  *  L  F  T  V  K  R  L  D  Q  E  S  A  Y  Q  K  V  H  N  *  L  *  R  P  D  P  S  G  T  L  M  P  I  F  I  L  I  W  R  N  *  K  R  S  N  V  H  H  P  K  A  T  *  I  G  Q  L  F  A  V  I  M  K  C  K  Q  L  H  *  R  D  S  Y  L  C  L  T  S  P  F  V  R  E  N  F  L  A  F  S  F  *  C  L  L  V  G  I  L  S  V  P  F  *  T  N  D  N  *  *  T  I  I  H  Q  V  T  S  Q  A  L  E  E  L  L  I  V  L  E  L  P  C  G  G  F  G  V  A  V  D  I  S  F  L  D  Y  V  E  K  I  S  F  K  P  D   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0042B19.2" strand="-"/>
                <serials PGL_serial="11" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="92909" stop="92812"/>
                    <exon start="92707" stop="92431"/>
                    <exon start="91437" stop="91162"/>
                    <exon start="90704" stop="90471"/>
                    <exon start="89689" stop="89522"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1050</number_coding_nucleotides>
                  <number_encoded_amino_acids>350</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TVLFLIPVLIVQGLTHLEQLEIWFPFLKGLLRIAFVSQVITGYLPSLVLQLFLYVVPSIMIMFSSIQGYIAMSQIEKSACIKVLWFTIWNIFFANVLSGSALYRVEIFLEPKNIPAILAVAVPGQATFFIAYVVTSGWTSTSSELFQLSTLVFNFIKRNICRKYDDEFEVPSVPYHSEIPRILLFGLLGITYFFLAPLILPFLLVYYCLGYLIYRNQLLNVYAPKYETGGKLWPIVHDSMIFSLILMHVIAIGIFGLKKLPLASSLTVPLPILTLVFNSYCRRRFLPMFKSYSVESLLKKDKEEQNDPTIASFHERLATAYQDPALLHVGYSGNNASIIAPLLGTAEVDA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="92895" e_stop="92812"/>
            <exon e_start="91437" e_stop="91162"/>
            <exon e_start="90704" e_stop="90471"/>
            <exon e_start="89689" e_stop="88890"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.415" acc_prob="0.972" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.973" e_score="1.000"/>
          <exon-intron don_prob="0.956" acc_prob="0.518" e_score="1.000"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="92895" e_stop="92812" e_length="84"/>
          </exon>
          <intron i_serial="1" don_prob="0.415" acc_prob="0.972">
            <gDNA_intron_boundary i_start="92811" i_stop="91438" i_length="1374"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="91437" e_stop="91162" e_length="276"/>
          </exon>
          <intron i_serial="2" don_prob="0.986" acc_prob="0.973">
            <gDNA_intron_boundary i_start="91161" i_stop="90705" i_length="457"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="90704" e_stop="90471" e_length="234"/>
          </exon>
          <intron i_serial="3" don_prob="0.956" acc_prob="0.518">
            <gDNA_intron_boundary i_start="90470" i_stop="89690" i_length="781"/>
          </intron>
          <exon e_serial="4" e_score="0.997">
            <gDNA_exon_boundary e_start="89689" e_stop="88890" e_length="800"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92895" stop="92812"/>
              <exon start="91437" stop="91187"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E301505" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91238" stop="91162"/>
              <exon start="90704" stop="90471"/>
              <exon start="89689" stop="89369"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E712486" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90683" stop="90471"/>
              <exon start="89689" stop="89324"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E366369" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89639" stop="88890"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540820" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TATACCCGTTTTAATAGTCCAAGGGCTTACACATCTTGAGCAGTTGGAAATCTGGTTTCCCTTTTTGAAAGGATTGCTTAGAAT : GCAACTTTCTTTATCGCCTATGTGGTTACATCTGGATGGACCAGCACTTCCTCAGAACTTTTTCAGCTGTCGACGCTCGTTTTCAATTTTATAAAGAGAAATATTTGTAGGAAATATGATGATGAGTTTGAGGTCCCTTCAGTTCCTTACCACAGTGAAATTCCCAGGATTCTTTTGTTTGGCCTCCTTGGTATAACATACTTCTTCCTTGCTCCCCTAATTCTGCCATTCCTCTTGGTTTACTACTGTCTGGGGTATCTCATCTACCGGAACCAG : CTGCTGAATGTATATGCACCCAAGTATGAGACTGGTGGAAAGTTGTGGCCTATAGTACATGATTCTATGATTTTCTCCTTGATACTGATGCATGTTATAGCCATTGGAATATTTGGGCTAAAGAAACTTCCTCTCGCTTCAAGCTTAACAGTTCCTCTTCCAATCCTTACTCTTGTGTTCAACAGCTATTGTAGGAGACGCTTCCTACCTATGTTCAAGTCTTATTCAGTCGAG : AGTTTGCTAAAAAAGGATAAAGAGGAGCAAAATGATCCTACAATTGCAAGTTTTCATGAGAGACTAGCCACAGCTTATCAAGATCCAGCACTGCTGCATGTCGGATATTCTGGAAATAATGCAAGTATCATTGCCCCCCTTCTTGGTACTGCTGAAGTTGATGCTTAGGGTGTAATCGAGTTATTGCTTACTGTAATCATGTAACACTTTTAGTTGGCAAACATGTGGGTATGTAGTTTGAGTTCAATCTGCTAGTCTGTATAACTCCAACTTTTTGGTTCAGTACTTTGGATAACTCCACTTTCTAGTTGACACTGTATTAGATAGTCAAAGGTATAACTTTTTACTGTCAAGAGACTTGATCAAGAATCTGCATACCAGAAAGTCCACAACTAACTATAAAGGCCTGATCCTTCAGGAACTTTAATGCCTATTTTTATTCTTATATGGAGGAACTAGAAAAGGTCAAATGTGCATCACCCCAAAGCTACTTGAATTGGTCAATTATTTGCAGTGATCATGAAGTGCAAACAATTGCATTAAAGAGATTCATATTTGTGCCTGACGTCTCCATTTGTGCGTGAGAACTTTTTGGCTTTCAGTTTTTAATGCCTTCTCGTTGGAATCTTATCAGTCCCTTTCTGAACGAATGATAATTAATGAACTATTATACATCAAGTTACATCACAAGCACTAGAAGAATTGTTAATCGTTTTGGAACTTCCATGTGGAGGATTCGGAGTGGCTGTTGACATTTCTTTTCTTGATTATGTTGAAAAAATCAGCTTTAAGCCTGACCA</gDNA_template>
            <first_frame> Y  T  R  F  N  S  P  R  A  Y  T  S  *  A  V  G  N  L  V  S  L  F  E  R  I  A  *  N  :  A  T  F  F  I  A  Y  V  V  T  S  G  W  T  S  T  S  S  E  L  F  Q  L  S  T  L  V  F  N  F  I  K  R  N  I  C  R  K  Y  D  D  E  F  E  V  P  S  V  P  Y  H  S  E  I  P  R  I  L  L  F  G  L  L  G  I  T  Y  F  F  L  A  P  L  I  L  P  F  L  L  V  Y  Y  C  L  G  Y  L  I  Y  R  N  Q  :  L  L  N  V  Y  A  P  K  Y  E  T  G  G  K  L  W  P  I  V  H  D  S  M  I  F  S  L  I  L  M  H  V  I  A  I  G  I  F  G  L  K  K  L  P  L  A  S  S  L  T  V  P  L  P  I  L  T  L  V  F  N  S  Y  C  R  R  R  F  L  P  M  F  K  S  Y  S  V  E  :  S  L  L  K  K  D  K  E  E  Q  N  D  P  T  I  A  S  F  H  E  R  L  A  T  A  Y  Q  D  P  A  L  L  H  V  G  Y  S  G  N  N  A  S  I  I  A  P  L  L  G  T  A  E  V  D  A  *  G  V  I  E  L  L  L  T  V  I  M  *  H  F  *  L  A  N  M  W  V  C  S  L  S  S  I  C  *  S  V  *  L  Q  L  F  G  S  V  L  W  I  T  P  L  S  S  *  H  C  I  R  *  S  K  V  *  L  F  T  V  K  R  L  D  Q  E  S  A  Y  Q  K  V  H  N  *  L  *  R  P  D  P  S  G  T  L  M  P  I  F  I  L  I  W  R  N  *  K  R  S  N  V  H  H  P  K  A  T  *  I  G  Q  L  F  A  V  I  M  K  C  K  Q  L  H  *  R  D  S  Y  L  C  L  T  S  P  F  V  R  E  N  F  L  A  F  S  F  *  C  L  L  V  G  I  L  S  V  P  F  *  T  N  D  N  *  *  T  I  I  H  Q  V  T  S  Q  A  L  E  E  L  L  I  V  L  E  L  P  C  G  G  F  G  V  A  V  D  I  S  F  L  D  Y  V  E  K  I  S  F  K  P  D   </first_frame>
            <second_frame>  I  P  V  L  I  V  Q  G  L  T  H  L  E  Q  L  E  I  W  F  P  F  L  K  G  L  L  R  M :   Q  L  S  L  S  P  M  W  L  H  L  D  G  P  A  L  P  Q  N  F  F  S  C  R  R  S  F  S  I  L  *  R  E  I  F  V  G  N  M  M  M  S  L  R  S  L  Q  F  L  T  T  V  K  F  P  G  F  F  C  L  A  S  L  V  *  H  T  S  S  L  L  P  *  F  C  H  S  S  W  F  T  T  V  W  G  I  S  S  T  G  T  S :   C  *  M  Y  M  H  P  S  M  R  L  V  E  S  C  G  L  *  Y  M  I  L  *  F  S  P  *  Y  *  C  M  L  *  P  L  E  Y  L  G  *  R  N  F  L  S  L  Q  A  *  Q  F  L  F  Q  S  L  L  L  C  S  T  A  I  V  G  D  A  S  Y  L  C  S  S  L  I  Q  S  R :   V  C  *  K  R  I  K  R  S  K  M  I  L  Q  L  Q  V  F  M  R  D  *  P  Q  L  I  K  I  Q  H  C  C  M  S  D  I  L  E  I  M  Q  V  S  L  P  P  F  L  V  L  L  K  L  M  L  R  V  *  S  S  Y  C  L  L  *  S  C  N  T  F  S  W  Q  T  C  G  Y  V  V  *  V  Q  S  A  S  L  Y  N  S  N  F  L  V  Q  Y  F  G  *  L  H  F  L  V  D  T  V  L  D  S  Q  R  Y  N  F  L  L  S  R  D  L  I  K  N  L  H  T  R  K  S  T  T  N  Y  K  G  L  I  L  Q  E  L  *  C  L  F  L  F  L  Y  G  G  T  R  K  G  Q  M  C  I  T  P  K  L  L  E  L  V  N  Y  L  Q  *  S  *  S  A  N  N  C  I  K  E  I  H  I  C  A  *  R  L  H  L  C  V  R  T  F  W  L  S  V  F  N  A  F  S  L  E  S  Y  Q  S  L  S  E  R  M  I  I  N  E  L  L  Y  I  K  L  H  H  K  H  *  K  N  C  *  S  F  W  N  F  H  V  E  D  S  E  W  L  L  T  F  L  F  L  I  M  L  K  K  S  A  L  S  L  T  </second_frame>
            <third_frame>   Y  P  F  *  *  S  K  G  L  H  I  L  S  S  W  K  S  G  F  P  F  *  K  D  C  L  E   : C  N  F  L  Y  R  L  C  G  Y  I  W  M  D  Q  H  F  L  R  T  F  S  A  V  D  A  R  F  Q  F  Y  K  E  K  Y  L  *  E  I  *  *  *  V  *  G  P  F  S  S  L  P  Q  *  N  S  Q  D  S  F  V  W  P  P  W  Y  N  I  L  L  P  C  S  P  N  S  A  I  P  L  G  L  L  L  S  G  V  S  H  L  P  E  P   : A  A  E  C  I  C  T  Q  V  *  D  W  W  K  V  V  A  Y  S  T  *  F  Y  D  F  L  L  D  T  D  A  C  Y  S  H  W  N  I  W  A  K  E  T  S  S  R  F  K  L  N  S  S  S  S  N  P  Y  S  C  V  Q  Q  L  L  *  E  T  L  P  T  Y  V  Q  V  L  F  S  R   : E  F  A  K  K  G  *  R  G  A  K  *  S  Y  N  C  K  F  S  *  E  T  S  H  S  L  S  R  S  S  T  A  A  C  R  I  F  W  K  *  C  K  Y  H  C  P  P  S  W  Y  C  *  S  *  C  L  G  C  N  R  V  I  A  Y  C  N  H  V  T  L  L  V  G  K  H  V  G  M  *  F  E  F  N  L  L  V  C  I  T  P  T  F  W  F  S  T  L  D  N  S  T  F  *  L  T  L  Y  *  I  V  K  G  I  T  F  Y  C  Q  E  T  *  S  R  I  C  I  P  E  S  P  Q  L  T  I  K  A  *  S  F  R  N  F  N  A  Y  F  Y  S  Y  M  E  E  L  E  K  V  K  C  A  S  P  Q  S  Y  L  N  W  S  I  I  C  S  D  H  E  V  Q  T  I  A  L  K  R  F  I  F  V  P  D  V  S  I  C  A  *  E  L  F  G  F  Q  F  L  M  P  S  R  W  N  L  I  S  P  F  L  N  E  *  *  L  M  N  Y  Y  T  S  S  Y  I  T  S  T  R  R  I  V  N  R  F  G  T  S  M  W  R  I  R  S  G  C  *  H  F  F  S  *  L  C  *  K  N  Q  L  *  A  *  P </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0042B19.2" strand="-"/>
                <serials PGL_serial="11" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="92814" stop="92812"/>
                    <exon start="91437" stop="91162"/>
                    <exon start="90704" stop="90471"/>
                    <exon start="89689" stop="89522"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>678</number_coding_nucleotides>
                  <number_encoded_amino_acids>226</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NATFFIAYVVTSGWTSTSSELFQLSTLVFNFIKRNICRKYDDEFEVPSVPYHSEIPRILLFGLLGITYFFLAPLILPFLLVYYCLGYLIYRNQLLNVYAPKYETGGKLWPIVHDSMIFSLILMHVIAIGIFGLKKLPLASSLTVPLPILTLVFNSYCRRRFLPMFKSYSVESLLKKDKEEQNDPTIASFHERLATAYQDPALLHVGYSGNNASIIAPLLGTAEVDA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="92895" e_stop="92812"/>
            <exon e_start="91437" e_stop="91162"/>
            <exon e_start="90519" e_stop="90471"/>
            <exon e_start="89689" e_stop="88890"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.415" acc_prob="0.972" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.470" e_score="1.000"/>
          <exon-intron don_prob="0.956" acc_prob="0.518" e_score="1.000"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="92895" e_stop="92812" e_length="84"/>
          </exon>
          <intron i_serial="1" don_prob="0.415" acc_prob="0.972">
            <gDNA_intron_boundary i_start="92811" i_stop="91438" i_length="1374"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="91437" e_stop="91162" e_length="276"/>
          </exon>
          <intron i_serial="2" don_prob="0.986" acc_prob="0.470">
            <gDNA_intron_boundary i_start="91161" i_stop="90520" i_length="642"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="90519" e_stop="90471" e_length="49"/>
          </exon>
          <intron i_serial="3" don_prob="0.956" acc_prob="0.518">
            <gDNA_intron_boundary i_start="90470" i_stop="89690" i_length="781"/>
          </intron>
          <exon e_serial="4" e_score="0.997">
            <gDNA_exon_boundary e_start="89689" e_stop="88890" e_length="800"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92895" stop="92812"/>
              <exon start="91437" stop="91187"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E301505" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91368" stop="91162"/>
              <exon start="90519" stop="90471"/>
              <exon start="89689" stop="89425"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353847" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89639" stop="88890"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540820" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="4" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TATACCCGTTTTAATAGTCCAAGGGCTTACACATCTTGAGCAGTTGGAAATCTGGTTTCCCTTTTTGAAAGGATTGCTTAGAAT : GCAACTTTCTTTATCGCCTATGTGGTTACATCTGGATGGACCAGCACTTCCTCAGAACTTTTTCAGCTGTCGACGCTCGTTTTCAATTTTATAAAGAGAAATATTTGTAGGAAATATGATGATGAGTTTGAGGTCCCTTCAGTTCCTTACCACAGTGAAATTCCCAGGATTCTTTTGTTTGGCCTCCTTGGTATAACATACTTCTTCCTTGCTCCCCTAATTCTGCCATTCCTCTTGGTTTACTACTGTCTGGGGTATCTCATCTACCGGAACCAG : CTATTGTAGGAGACGCTTCCTACCTATGTTCAAGTCTTATTCAGTCGAG : AGTTTGCTAAAAAAGGATAAAGAGGAGCAAAATGATCCTACAATTGCAAGTTTTCATGAGAGACTAGCCACAGCTTATCAAGATCCAGCACTGCTGCATGTCGGATATTCTGGAAATAATGCAAGTATCATTGCCCCCCTTCTTGGTACTGCTGAAGTTGATGCTTAGGGTGTAATCGAGTTATTGCTTACTGTAATCATGTAACACTTTTAGTTGGCAAACATGTGGGTATGTAGTTTGAGTTCAATCTGCTAGTCTGTATAACTCCAACTTTTTGGTTCAGTACTTTGGATAACTCCACTTTCTAGTTGACACTGTATTAGATAGTCAAAGGTATAACTTTTTACTGTCAAGAGACTTGATCAAGAATCTGCATACCAGAAAGTCCACAACTAACTATAAAGGCCTGATCCTTCAGGAACTTTAATGCCTATTTTTATTCTTATATGGAGGAACTAGAAAAGGTCAAATGTGCATCACCCCAAAGCTACTTGAATTGGTCAATTATTTGCAGTGATCATGAAGTGCAAACAATTGCATTAAAGAGATTCATATTTGTGCCTGACGTCTCCATTTGTGCGTGAGAACTTTTTGGCTTTCAGTTTTTAATGCCTTCTCGTTGGAATCTTATCAGTCCCTTTCTGAACGAATGATAATTAATGAACTATTATACATCAAGTTACATCACAAGCACTAGAAGAATTGTTAATCGTTTTGGAACTTCCATGTGGAGGATTCGGAGTGGCTGTTGACATTTCTTTTCTTGATTATGTTGAAAAAATCAGCTTTAAGCCTGACCA</gDNA_template>
            <first_frame> Y  T  R  F  N  S  P  R  A  Y  T  S  *  A  V  G  N  L  V  S  L  F  E  R  I  A  *  N  :  A  T  F  F  I  A  Y  V  V  T  S  G  W  T  S  T  S  S  E  L  F  Q  L  S  T  L  V  F  N  F  I  K  R  N  I  C  R  K  Y  D  D  E  F  E  V  P  S  V  P  Y  H  S  E  I  P  R  I  L  L  F  G  L  L  G  I  T  Y  F  F  L  A  P  L  I  L  P  F  L  L  V  Y  Y  C  L  G  Y  L  I  Y  R  N  Q  :  L  L  *  E  T  L  P  T  Y  V  Q  V  L  F  S  R   : E  F  A  K  K  G  *  R  G  A  K  *  S  Y  N  C  K  F  S  *  E  T  S  H  S  L  S  R  S  S  T  A  A  C  R  I  F  W  K  *  C  K  Y  H  C  P  P  S  W  Y  C  *  S  *  C  L  G  C  N  R  V  I  A  Y  C  N  H  V  T  L  L  V  G  K  H  V  G  M  *  F  E  F  N  L  L  V  C  I  T  P  T  F  W  F  S  T  L  D  N  S  T  F  *  L  T  L  Y  *  I  V  K  G  I  T  F  Y  C  Q  E  T  *  S  R  I  C  I  P  E  S  P  Q  L  T  I  K  A  *  S  F  R  N  F  N  A  Y  F  Y  S  Y  M  E  E  L  E  K  V  K  C  A  S  P  Q  S  Y  L  N  W  S  I  I  C  S  D  H  E  V  Q  T  I  A  L  K  R  F  I  F  V  P  D  V  S  I  C  A  *  E  L  F  G  F  Q  F  L  M  P  S  R  W  N  L  I  S  P  F  L  N  E  *  *  L  M  N  Y  Y  T  S  S  Y  I  T  S  T  R  R  I  V  N  R  F  G  T  S  M  W  R  I  R  S  G  C  *  H  F  F  S  *  L  C  *  K  N  Q  L  *  A  *  P </first_frame>
            <second_frame>  I  P  V  L  I  V  Q  G  L  T  H  L  E  Q  L  E  I  W  F  P  F  L  K  G  L  L  R  M :   Q  L  S  L  S  P  M  W  L  H  L  D  G  P  A  L  P  Q  N  F  F  S  C  R  R  S  F  S  I  L  *  R  E  I  F  V  G  N  M  M  M  S  L  R  S  L  Q  F  L  T  T  V  K  F  P  G  F  F  C  L  A  S  L  V  *  H  T  S  S  L  L  P  *  F  C  H  S  S  W  F  T  T  V  W  G  I  S  S  T  G  T  S :   Y  C  R  R  R  F  L  P  M  F  K  S  Y  S  V  E  :  S  L  L  K  K  D  K  E  E  Q  N  D  P  T  I  A  S  F  H  E  R  L  A  T  A  Y  Q  D  P  A  L  L  H  V  G  Y  S  G  N  N  A  S  I  I  A  P  L  L  G  T  A  E  V  D  A  *  G  V  I  E  L  L  L  T  V  I  M  *  H  F  *  L  A  N  M  W  V  C  S  L  S  S  I  C  *  S  V  *  L  Q  L  F  G  S  V  L  W  I  T  P  L  S  S  *  H  C  I  R  *  S  K  V  *  L  F  T  V  K  R  L  D  Q  E  S  A  Y  Q  K  V  H  N  *  L  *  R  P  D  P  S  G  T  L  M  P  I  F  I  L  I  W  R  N  *  K  R  S  N  V  H  H  P  K  A  T  *  I  G  Q  L  F  A  V  I  M  K  C  K  Q  L  H  *  R  D  S  Y  L  C  L  T  S  P  F  V  R  E  N  F  L  A  F  S  F  *  C  L  L  V  G  I  L  S  V  P  F  *  T  N  D  N  *  *  T  I  I  H  Q  V  T  S  Q  A  L  E  E  L  L  I  V  L  E  L  P  C  G  G  F  G  V  A  V  D  I  S  F  L  D  Y  V  E  K  I  S  F  K  P  D   </second_frame>
            <third_frame>   Y  P  F  *  *  S  K  G  L  H  I  L  S  S  W  K  S  G  F  P  F  *  K  D  C  L  E   : C  N  F  L  Y  R  L  C  G  Y  I  W  M  D  Q  H  F  L  R  T  F  S  A  V  D  A  R  F  Q  F  Y  K  E  K  Y  L  *  E  I  *  *  *  V  *  G  P  F  S  S  L  P  Q  *  N  S  Q  D  S  F  V  W  P  P  W  Y  N  I  L  L  P  C  S  P  N  S  A  I  P  L  G  L  L  L  S  G  V  S  H  L  P  E  P   : A  I  V  G  D  A  S  Y  L  C  S  S  L  I  Q  S  R :   V  C  *  K  R  I  K  R  S  K  M  I  L  Q  L  Q  V  F  M  R  D  *  P  Q  L  I  K  I  Q  H  C  C  M  S  D  I  L  E  I  M  Q  V  S  L  P  P  F  L  V  L  L  K  L  M  L  R  V  *  S  S  Y  C  L  L  *  S  C  N  T  F  S  W  Q  T  C  G  Y  V  V  *  V  Q  S  A  S  L  Y  N  S  N  F  L  V  Q  Y  F  G  *  L  H  F  L  V  D  T  V  L  D  S  Q  R  Y  N  F  L  L  S  R  D  L  I  K  N  L  H  T  R  K  S  T  T  N  Y  K  G  L  I  L  Q  E  L  *  C  L  F  L  F  L  Y  G  G  T  R  K  G  Q  M  C  I  T  P  K  L  L  E  L  V  N  Y  L  Q  *  S  *  S  A  N  N  C  I  K  E  I  H  I  C  A  *  R  L  H  L  C  V  R  T  F  W  L  S  V  F  N  A  F  S  L  E  S  Y  Q  S  L  S  E  R  M  I  I  N  E  L  L  Y  I  K  L  H  H  K  H  *  K  N  C  *  S  F  W  N  F  H  V  E  D  S  E  W  L  L  T  F  L  F  L  I  M  L  K  K  S  A  L  S  L  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0042B19.2" strand="-"/>
                <serials PGL_serial="11" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="92814" stop="92812"/>
                    <exon start="91437" stop="91162"/>
                    <exon start="90519" stop="90511"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>285</number_coding_nucleotides>
                  <number_encoded_amino_acids>95</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NATFFIAYVVTSGWTSTSSELFQLSTLVFNFIKRNICRKYDDEFEVPSVPYHSEIPRILLFGLLGITYFFLAPLILPFLLVYYCLGYLIYRNQLL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0042B19.2" strand="-"/>
                <serials PGL_serial="11" AGS_serial="4" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="91217" stop="91162"/>
                    <exon start="90519" stop="90471"/>
                    <exon start="89689" stop="89522"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>270</number_coding_nucleotides>
                  <number_encoded_amino_acids>90</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FCHSSWFTTVWGISSTGTSYCRRRFLPMFKSYSVESLLKKDKEEQNDPTIASFHERLATAYQDPALLHVGYSGNNASIIAPLLGTAEVDA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="5">
          <exon_coordinates>
            <exon e_start="93099" e_stop="92812"/>
            <exon e_start="91437" e_stop="91095"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.415" acc_prob="0.972" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="93099" e_stop="92812" e_length="288"/>
          </exon>
          <intron i_serial="1" don_prob="0.415" acc_prob="0.972">
            <gDNA_intron_boundary i_start="92811" i_stop="91438" i_length="1374"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="91437" e_stop="91095" e_length="343"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93099" stop="92812"/>
              <exon start="91437" stop="91095"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E305335" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92895" stop="92812"/>
              <exon start="91437" stop="91187"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E301505" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="5" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGCCTTTGTATCTTTCCGGACACGTTTTGCCGCAGCTTCAGCTACACACATGCAGCAAGGTGTAAATCCTACACAATGGGTCACTGAGCCAGCTCCTGATCCAGAGGATGTGTATTGGCCTTTCTTTTCAGCATCATTTCTAAAGAGATGGATTAGCAACCTGGTGGTTGTTGTGGCATGCGTCCTCCTTACAGTGCTATTTCTTATACCCGTTTTAATAGTCCAAGGGCTTACACATCTTGAGCAGTTGGAAATCTGGTTTCCCTTTTTGAAAGGATTGCTTAGAAT : GCAACTTTCTTTATCGCCTATGTGGTTACATCTGGATGGACCAGCACTTCCTCAGAACTTTTTCAGCTGTCGACGCTCGTTTTCAATTTTATAAAGAGAAATATTTGTAGGAAATATGATGATGAGTTTGAGGTCCCTTCAGTTCCTTACCACAGTGAAATTCCCAGGATTCTTTTGTTTGGCCTCCTTGGTATAACATACTTCTTCCTTGCTCCCCTAATTCTGCCATTCCTCTTGGTTTACTACTGTCTGGGGTATCTCATCTACCGGAACCAGGTTGGTTGCACATTTTTTACATTTTTCTTCTGCTTCCTTGGGATACATAAAAATGACGAATTCTACT</gDNA_template>
            <first_frame> C  L  C  I  F  P  D  T  F  C  R  S  F  S  Y  T  H  A  A  R  C  K  S  Y  T  M  G  H  *  A  S  S  *  S  R  G  C  V  L  A  F  L  F  S  I  I  S  K  E  M  D  *  Q  P  G  G  C  C  G  M  R  P  P  Y  S  A  I  S  Y  T  R  F  N  S  P  R  A  Y  T  S  *  A  V  G  N  L  V  S  L  F  E  R  I  A  *  N  :  A  T  F  F  I  A  Y  V  V  T  S  G  W  T  S  T  S  S  E  L  F  Q  L  S  T  L  V  F  N  F  I  K  R  N  I  C  R  K  Y  D  D  E  F  E  V  P  S  V  P  Y  H  S  E  I  P  R  I  L  L  F  G  L  L  G  I  T  Y  F  F  L  A  P  L  I  L  P  F  L  L  V  Y  Y  C  L  G  Y  L  I  Y  R  N  Q  V  G  C  T  F  F  T  F  F  F  C  F  L  G  I  H  K  N  D  E  F  Y  </first_frame>
            <second_frame>  A  F  V  S  F  R  T  R  F  A  A  A  S  A  T  H  M  Q  Q  G  V  N  P  T  Q  W  V  T  E  P  A  P  D  P  E  D  V  Y  W  P  F  F  S  A  S  F  L  K  R  W  I  S  N  L  V  V  V  V  A  C  V  L  L  T  V  L  F  L  I  P  V  L  I  V  Q  G  L  T  H  L  E  Q  L  E  I  W  F  P  F  L  K  G  L  L  R  M :   Q  L  S  L  S  P  M  W  L  H  L  D  G  P  A  L  P  Q  N  F  F  S  C  R  R  S  F  S  I  L  *  R  E  I  F  V  G  N  M  M  M  S  L  R  S  L  Q  F  L  T  T  V  K  F  P  G  F  F  C  L  A  S  L  V  *  H  T  S  S  L  L  P  *  F  C  H  S  S  W  F  T  T  V  W  G  I  S  S  T  G  T  R  L  V  A  H  F  L  H  F  S  S  A  S  L  G  Y  I  K  M  T  N  S  T </second_frame>
            <third_frame>   P  L  Y  L  S  G  H  V  L  P  Q  L  Q  L  H  T  C  S  K  V  *  I  L  H  N  G  S  L  S  Q  L  L  I  Q  R  M  C  I  G  L  S  F  Q  H  H  F  *  R  D  G  L  A  T  W  W  L  L  W  H  A  S  S  L  Q  C  Y  F  L  Y  P  F  *  *  S  K  G  L  H  I  L  S  S  W  K  S  G  F  P  F  *  K  D  C  L  E   : C  N  F  L  Y  R  L  C  G  Y  I  W  M  D  Q  H  F  L  R  T  F  S  A  V  D  A  R  F  Q  F  Y  K  E  K  Y  L  *  E  I  *  *  *  V  *  G  P  F  S  S  L  P  Q  *  N  S  Q  D  S  F  V  W  P  P  W  Y  N  I  L  L  P  C  S  P  N  S  A  I  P  L  G  L  L  L  S  G  V  S  H  L  P  E  P  G  W  L  H  I  F  Y  I  F  L  L  L  P  W  D  T  *  K  *  R  I  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0042B19.2" strand="-"/>
                <serials PGL_serial="11" AGS_serial="5" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="93098" stop="92812"/>
                    <exon start="91437" stop="91344"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>378</number_coding_nucleotides>
                  <number_encoded_amino_acids>126</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AFVSFRTRFAAASATHMQQGVNPTQWVTEPAPDPEDVYWPFFSASFLKRWISNLVVVVACVLLTVLFLIPVLIVQGLTHLEQLEIWFPFLKGLLRMQLSLSPMWLHLDGPALPQNFFSCRRSFSIL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0042B19.2" strand="-"/>
                <serials PGL_serial="11" AGS_serial="5" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="92814" stop="92812"/>
                    <exon start="91437" stop="91096"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>345</number_coding_nucleotides>
                  <number_encoded_amino_acids>115</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NATFFIAYVVTSGWTSTSSELFQLSTLVFNFIKRNICRKYDDEFEVPSVPYHSEIPRILLFGLLGITYFFLAPLILPFLLVYYCLGYLIYRNQVGCTFFTFFFCFLGIHKNDEFY</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="98418" PGL_stop="97194"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="98418" e_stop="98277"/>
            <exon e_start="97715" e_stop="97194"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.808" e_score="1.000"/>
          <exon-only e_score="0.969"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="98418" e_stop="98277" e_length="142"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.808">
            <gDNA_intron_boundary i_start="98276" i_stop="97716" i_length="561"/>
          </intron>
          <exon e_serial="2" e_score="0.969">
            <gDNA_exon_boundary e_start="97715" e_stop="97194" e_length="522"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98418" stop="98277"/>
              <exon start="97715" stop="97194"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E539474" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98418" stop="98277"/>
              <exon start="97715" stop="97429"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E282325" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAATAGTTTACTTAAAACTCCACTGCAACTCTTTTCGTCCCTTTTCTTCGTAGTAAAGTAAAGGTTTGACCTTTGGATCTCTCGTCTCTATCTATCTTCTTCATTAGGATTAGGGCTACAAAGGTCGTATCTTCTGTTGAAG : CTGCGATAATCTGCATTCACGAGTGTTTATTATCTGTGCTATTCGTATTCTGGTGCTGTTGATTTGAAGAGCTCATGTTGTAAGCAAACAGTTCAGTGAAAGGATTTAAGGAATGATCCTCTCAGCACTTTTGACTTCTGTTGGAATAAATCTTGGACTTTGTTTTCTGTTCTTCACATTGTATTCTATATTGAGAAAGCAGCCAGGAAATGCAGAAGTTTATGCACCACGCTTGGTTGCTGAGGGGAGATCTCAGCAAATCAGTAATTTCAATTTGGAGAGACTTTTGCCATCAGCTGGTTGGGTGACAAGAGCATGGCGACCCTCAGAAGCAGAGCTCTTAGCCAACTCAGGCTTGGATGCTGTTGTTTTCATGCGCATTTTTATATTCAGGTTACTTAAGCACTGTTATGCGATGAAGGCTTGACGAGAATTTTATGTTTATTATAGCTTCTGTGCCGAACTTCACACCTTATGTTTATTCCCAGTGAGTGACATTTGCATTTTATTTCCAGGATTTGC</gDNA_template>
            <first_frame> K  *  F  T  *  N  S  T  A  T  L  F  V  P  F  L  R  S  K  V  K  V  *  P  L  D  L  S  S  L  S  I  F  F  I  R  I  R  A  T  K  V  V  S  S  V  E   : A  A  I  I  C  I  H  E  C  L  L  S  V  L  F  V  F  W  C  C  *  F  E  E  L  M  L  *  A  N  S  S  V  K  G  F  K  E  *  S  S  Q  H  F  *  L  L  L  E  *  I  L  D  F  V  F  C  S  S  H  C  I  L  Y  *  E  S  S  Q  E  M  Q  K  F  M  H  H  A  W  L  L  R  G  D  L  S  K  S  V  I  S  I  W  R  D  F  C  H  Q  L  V  G  *  Q  E  H  G  D  P  Q  K  Q  S  S  *  P  T  Q  A  W  M  L  L  F  S  C  A  F  L  Y  S  G  Y  L  S  T  V  M  R  *  R  L  D  E  N  F  M  F  I  I  A  S  V  P  N  F  T  P  Y  V  Y  S  Q  *  V  T  F  A  F  Y  F  Q  D  L  </first_frame>
            <second_frame>  N  S  L  L  K  T  P  L  Q  L  F  S  S  L  F  F  V  V  K  *  R  F  D  L  W  I  S  R  L  Y  L  S  S  S  L  G  L  G  L  Q  R  S  Y  L  L  L  K  :  L  R  *  S  A  F  T  S  V  Y  Y  L  C  Y  S  Y  S  G  A  V  D  L  K  S  S  C  C  K  Q  T  V  Q  *  K  D  L  R  N  D  P  L  S  T  F  D  F  C  W  N  K  S  W  T  L  F  S  V  L  H  I  V  F  Y  I  E  K  A  A  R  K  C  R  S  L  C  T  T  L  G  C  *  G  E  I  S  A  N  Q  *  F  Q  F  G  E  T  F  A  I  S  W  L  G  D  K  S  M  A  T  L  R  S  R  A  L  S  Q  L  R  L  G  C  C  C  F  H  A  H  F  Y  I  Q  V  T  *  A  L  L  C  D  E  G  L  T  R  I  L  C  L  L  *  L  L  C  R  T  S  H  L  M  F  I  P  S  E  *  H  L  H  F  I  S  R  I  C </second_frame>
            <third_frame>   I  V  Y  L  K  L  H  C  N  S  F  R  P  F  S  S  *  *  S  K  G  L  T  F  G  S  L  V  S  I  Y  L  L  H  *  D  *  G  Y  K  G  R  I  F  C  *  S :   C  D  N  L  H  S  R  V  F  I  I  C  A  I  R  I  L  V  L  L  I  *  R  A  H  V  V  S  K  Q  F  S  E  R  I  *  G  M  I  L  S  A  L  L  T  S  V  G  I  N  L  G  L  C  F  L  F  F  T  L  Y  S  I  L  R  K  Q  P  G  N  A  E  V  Y  A  P  R  L  V  A  E  G  R  S  Q  Q  I  S  N  F  N  L  E  R  L  L  P  S  A  G  W  V  T  R  A  W  R  P  S  E  A  E  L  L  A  N  S  G  L  D  A  V  V  F  M  R  I  F  I  F  R  L  L  K  H  C  Y  A  M  K  A  *  R  E  F  Y  V  Y  Y  S  F  C  A  E  L  H  T  L  C  L  F  P  V  S  D  I  C  I  L  F  P  G  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0042B19.2" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="97606" stop="97289"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>315</number_coding_nucleotides>
                  <number_encoded_amino_acids>105</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GMILSALLTSVGINLGLCFLFFTLYSILRKQPGNAEVYAPRLVAEGRSQQISNFNLERLLPSAGWVTRAWRPSEAELLANSGLDAVVFMRIFIFRLLKHCYAMKA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="98417" e_stop="97943"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.943"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.943">
            <gDNA_exon_boundary e_start="98417" e_stop="97943" e_length="475"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98417" stop="97943"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E366368" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AATAGTTTACTTAAAACTCCACTGCAACTCTTTTCGTCCCTTTTCTTCGTAGTAAAGTAAAGGTTTGACCTTTGGATCTCTCGTCTCTATCTATCTTCTTCATTAGGATTAGGGCTACAAAGGTCGTATCTTCTGTTGAAGGTAATTAATCATCATTCATCACTTACTTGTACTTGTTTTGTTTTCAATATGTTTACATATCCACTCTAATTAACAAAAATAACTTTATTAAGGAAGTGGAAGATTTCTTCATGGAAAATCGTAACTCCTCTCTAAGTAATGATGCAAAATTTGCAATAATTCGATTATCTTCAATTTACGGAAGAAACAAGAATTGACAGAGGAGAAATGATTTCCAGACTAATGTGTGTGTCTGTATGTGCAAGGAAGGAGAAACCTTTTTATGTCTGTTTACTTACTTTACCTTCCTCTCTTGTGTTCTGGAGCTTCGTAGCCATCATCCGATGACTGAGAA</gDNA_template>
            <first_frame> N  S  L  L  K  T  P  L  Q  L  F  S  S  L  F  F  V  V  K  *  R  F  D  L  W  I  S  R  L  Y  L  S  S  S  L  G  L  G  L  Q  R  S  Y  L  L  L  K  V  I  N  H  H  S  S  L  T  C  T  C  F  V  F  N  M  F  T  Y  P  L  *  L  T  K  I  T  L  L  R  K  W  K  I  S  S  W  K  I  V  T  P  L  *  V  M  M  Q  N  L  Q  *  F  D  Y  L  Q  F  T  E  E  T  R  I  D  R  G  E  M  I  S  R  L  M  C  V  S  V  C  A  R  K  E  K  P  F  Y  V  C  L  L  T  L  P  S  S  L  V  F  W  S  F  V  A  I  I  R  *  L  R  </first_frame>
            <second_frame>  I  V  Y  L  K  L  H  C  N  S  F  R  P  F  S  S  *  *  S  K  G  L  T  F  G  S  L  V  S  I  Y  L  L  H  *  D  *  G  Y  K  G  R  I  F  C  *  R  *  L  I  I  I  H  H  L  L  V  L  V  L  F  S  I  C  L  H  I  H  S  N  *  Q  K  *  L  Y  *  G  S  G  R  F  L  H  G  K  S  *  L  L  S  K  *  *  C  K  I  C  N  N  S  I  I  F  N  L  R  K  K  Q  E  L  T  E  E  K  *  F  P  D  *  C  V  C  L  Y  V  Q  G  R  R  N  L  F  M  S  V  Y  L  L  Y  L  P  L  L  C  S  G  A  S  *  P  S  S  D  D  *  E </second_frame>
            <third_frame>   *  F  T  *  N  S  T  A  T  L  F  V  P  F  L  R  S  K  V  K  V  *  P  L  D  L  S  S  L  S  I  F  F  I  R  I  R  A  T  K  V  V  S  S  V  E  G  N  *  S  S  F  I  T  Y  L  Y  L  F  C  F  Q  Y  V  Y  I  S  T  L  I  N  K  N  N  F  I  K  E  V  E  D  F  F  M  E  N  R  N  S  S  L  S  N  D  A  K  F  A  I  I  R  L  S  S  I  Y  G  R  N  K  N  *  Q  R  R  N  D  F  Q  T  N  V  C  V  C  M  C  K  E  G  E  T  F  L  C  L  F  T  Y  F  T  F  L  S  C  V  L  E  L  R  S  H  H  P  M  T  E   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLm0042B19.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="+" PGL_start="105268" PGL_stop="105755"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="105268" e_stop="105755"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="105268" e_stop="105755" e_length="488"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="105268" stop="105755"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E704779" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAGCAGCAAATTCAAGCTGGATGTAGCCCTCTCTCAGAGGGAAGTGTTCTAGTCTCACCTAGTTAAAACACATACTGAAGATTCATGTGGTTGACAACGCTTCATTTGGTGAAACTGACATTCTTTATCCTTGACCATCATTAGCATGGTGGGAGGATACATTGTGCAGCTGAGAACGTGTCAGGCGTTAGGCGAAATACGTTCATTGAAGCACAAGCTTCAACCTGCTGGAGCAAAGATGGTTTCTGATTTACAAGTTGTGATCTCCATTCTGAATGCTATATGGTGCTTTACTGTTAACAGAGCCTTGTTGGCTTTCGGGGGAAGAATAGGGAGGGTTGCCTCGTGCAATTTTGAGCTTCTATAGCGGTTACTGCACTTTTAAGTTTGATAACTTAGTTGTTACCATTTTTGCTGTACAATATTGACTTGACTACAGATTAGCGATTGATATATGATGGTATGAAAGGTTACTGTTAGTTGATAC</gDNA_template>
            <first_frame> K  A  A  N  S  S  W  M  *  P  S  L  R  G  K  C  S  S  L  T  *  L  K  H  I  L  K  I  H  V  V  D  N  A  S  F  G  E  T  D  I  L  Y  P  *  P  S  L  A  W  W  E  D  T  L  C  S  *  E  R  V  R  R  *  A  K  Y  V  H  *  S  T  S  F  N  L  L  E  Q  R  W  F  L  I  Y  K  L  *  S  P  F  *  M  L  Y  G  A  L  L  L  T  E  P  C  W  L  S  G  E  E  *  G  G  L  P  R  A  I  L  S  F  Y  S  G  Y  C  T  F  K  F  D  N  L  V  V  T  I  F  A  V  Q  Y  *  L  D  Y  R  L  A  I  D  I  *  W  Y  E  R  L  L  L  V  D   </first_frame>
            <second_frame>  K  Q  Q  I  Q  A  G  C  S  P  L  S  E  G  S  V  L  V  S  P  S  *  N  T  Y  *  R  F  M  W  L  T  T  L  H  L  V  K  L  T  F  F  I  L  D  H  H  *  H  G  G  R  I  H  C  A  A  E  N  V  S  G  V  R  R  N  T  F  I  E  A  Q  A  S  T  C  W  S  K  D  G  F  *  F  T  S  C  D  L  H  S  E  C  Y  M  V  L  Y  C  *  Q  S  L  V  G  F  R  G  K  N  R  E  G  C  L  V  Q  F  *  A  S  I  A  V  T  A  L  L  S  L  I  T  *  L  L  P  F  L  L  Y  N  I  D  L  T  T  D  *  R  L  I  Y  D  G  M  K  G  Y  C  *  L  I  </second_frame>
            <third_frame>   S  S  K  F  K  L  D  V  A  L  S  Q  R  E  V  F  *  S  H  L  V  K  T  H  T  E  D  S  C  G  *  Q  R  F  I  W  *  N  *  H  S  L  S  L  T  I  I  S  M  V  G  G  Y  I  V  Q  L  R  T  C  Q  A  L  G  E  I  R  S  L  K  H  K  L  Q  P  A  G  A  K  M  V  S  D  L  Q  V  V  I  S  I  L  N  A  I  W  C  F  T  V  N  R  A  L  L  A  F  G  G  R  I  G  R  V  A  S  C  N  F  E  L  L  *  R  L  L  H  F  *  V  *  *  L  S  C  Y  H  F  C  C  T  I  L  T  *  L  Q  I  S  D  *  Y  M  M  V  *  K  V  T  V  S  *  Y </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0042B19.2" strand="+"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="105387" stop="105635"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>246</number_coding_nucleotides>
                  <number_encoded_amino_acids>82</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HSLSLTIISMVGGYIVQLRTCQALGEIRSLKHKLQPAGAKMVSDLQVVISILNAIWCFTVNRALLAFGGRIGRVASCNFELL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="-" PGL_start="106734" PGL_stop="106279"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="106734" e_stop="106279"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="106734" e_stop="106279" e_length="456"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106734" stop="106279"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540835" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106734" stop="106279"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540838" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106733" stop="106280"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E297764" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106733" stop="106302"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289882" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106660" stop="106281"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223984" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106656" stop="106281"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223839" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTGTGGTATAATGCATGTACAACCAGGACTGCTCAAGTACTTGTGATGCCGTTGATGCTCAAATCGAAACTATTGAGCAGTTTTTAGAAATGTTGAAGGCTGTATTGAAAGTAATGAGAAGTCAGATTGCTCAATGAGGTTGAGCTGATGCCTAGCTTTTTGATGCCGCATGAGCGTTTTGTGTTAAAACATCTTCAAAGACGAGGACTCAGACAAAATTGAAGTTCAGCATTTGGGGCTTTAAATATGGGTTACTAAGCTTGCTGAGTGGTTAAAATCCTCTTGTCGTTATTGTCAGTGAGATGGTGGCAGTTATATCAAACATAAGTGTCACTTGTAACTTGCCAATTTTTGTGCGCTCTGTGTATCTTTGTTTCTACCGTTTTTCTTTTAACATATTATGGTGTCAGACTGAAATATCTCAGTTCAGAGTGTATGTAAATCTATTTGCAAACA</gDNA_template>
            <first_frame> L  W  Y  N  A  C  T  T  R  T  A  Q  V  L  V  M  P  L  M  L  K  S  K  L  L  S  S  F  *  K  C  *  R  L  Y  *  K  *  *  E  V  R  L  L  N  E  V  E  L  M  P  S  F  L  M  P  H  E  R  F  V  L  K  H  L  Q  R  R  G  L  R  Q  N  *  S  S  A  F  G  A  L  N  M  G  Y  *  A  C  *  V  V  K  I  L  L  S  L  L  S  V  R  W  W  Q  L  Y  Q  T  *  V  S  L  V  T  C  Q  F  L  C  A  L  C  I  F  V  S  T  V  F  L  L  T  Y  Y  G  V  R  L  K  Y  L  S  S  E  C  M  *  I  Y  L  Q  T </first_frame>
            <second_frame>  C  G  I  M  H  V  Q  P  G  L  L  K  Y  L  *  C  R  *  C  S  N  R  N  Y  *  A  V  F  R  N  V  E  G  C  I  E  S  N  E  K  S  D  C  S  M  R  L  S  *  C  L  A  F  *  C  R  M  S  V  L  C  *  N  I  F  K  D  E  D  S  D  K  I  E  V  Q  H  L  G  L  *  I  W  V  T  K  L  A  E  W  L  K  S  S  C  R  Y  C  Q  *  D  G  G  S  Y  I  K  H  K  C  H  L  *  L  A  N  F  C  A  L  C  V  S  L  F  L  P  F  F  F  *  H  I  M  V  S  D  *  N  I  S  V  Q  S  V  C  K  S  I  C  K   </second_frame>
            <third_frame>   V  V  *  C  M  Y  N  Q  D  C  S  S  T  C  D  A  V  D  A  Q  I  E  T  I  E  Q  F  L  E  M  L  K  A  V  L  K  V  M  R  S  Q  I  A  Q  *  G  *  A  D  A  *  L  F  D  A  A  *  A  F  C  V  K  T  S  S  K  T  R  T  Q  T  K  L  K  F  S  I  W  G  F  K  Y  G  L  L  S  L  L  S  G  *  N  P  L  V  V  I  V  S  E  M  V  A  V  I  S  N  I  S  V  T  C  N  L  P  I  F  V  R  S  V  Y  L  C  F  Y  R  F  S  F  N  I  L  W  C  Q  T  E  I  S  Q  F  R  V  Y  V  N  L  F  A  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLm0042B19.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 152 chains have been computed
$ 
$ memory statistics:
$ 320200 bytes spliced alignments in total
$ 117 spliced alignments have been stored
$ 2736 bytes was the average size of a spliced alignment
$ 24904 bytes predicted gene locations in total
$ 14 predicted gene locations have been stored
$ 1778 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 170 backtrace matrices have been allocated
$ 
$ date finished: 2009-07-29 10:46:25
-->
