<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-12-01 11:31:25"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U573442" ref_strand="+" ref_description="SGN-U573442 Tomato 200607#2 [5 ESTs aligned] (*GB) gi|157338594|emb|CAO41945.1| (e_value=3e-35) unnamed; (*ATH) AT4G20030.1 (e_value=1e-32)  Symbol: None | RNA recognition motif (RRM)-containing protein, low similarity to heterogeneous nuclear ribonucleoprotein G (Mus musculus) GI:5579009; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) | chr4:10... ; (*SWP) sp|Q54PB2|MRD1_DICDI (e_value=2e-13) Multiple RNA-binding domain-containing protein 1 OS=Dictyostelium discoideum GN=mrd1; ">
      <seq>atcggccgaattggaaaaccaccattcatttgttgattgatgatgttgatgtgcaaaggggtatggccaagcagctcatccgttgttctgttgcagacaccaaatggacacaaatccttcaaaacccaagctagcttttctagctaccctcttgccagcaaagttatggttagaaatctatcatactccactgatgaaagttgtctggagaaaatattttcaaattttggtcatgttgctgaagttaagattgtgaaggatgaagtgactaaaagatcaaagggatatgcttttattcagtacacttctcaagaaaatgccatgcttgctcttgatagcatggatcacaagtacatcaatggcagggttatatttgtggaacttgcaaagcctacaaagaaagactttggcagatacccgagaagttgtggaccacctgtggagagattaccatctgaaaatgaagttccagacctaaaagaaaactgctaaggtaatgtttacgctagtgttagagtggcaatcattgataggtgcatgacagttccacaagtcatcattcttgaaactactgtgatgcagctttggttcgacttgataaaacttctattgcgtaaaatttcactcttaggtcactcctacaggttacaggactagtttacttgttctgtcatcgcattctgtgttttgcatgtaaacttcacacacatatatattgtgtttgttctattaggcatggcgcgttgcatgtcagtccaggtcaattacttcatactagaagaggctaagtgtacttccggtcatctttcaaaatctgtacttagaatcatgtatattaaatcgcaagacttgtgctttctcaacttgatgtaactagtttgatggtcaggttctgctactgtatatgtatttttagcttttacgcggtgaaaatggactatcatgatgtactttangctgctgccaagggtctgaaagttgcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0020J02.1" temp_strand="+" temp_description="C02SLm0020J02.1  AC226519.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0020J02 sequenced_by:kribb upload_account_name:korea">
        <position start="2774" stop="7067"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3079" g_stop="3238" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="16" r_stop="175" r_length="160" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="3239" i_stop="5775" i_length="2537">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.017" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="5776" g_stop="5844" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="176" r_stop="244" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="5845" i_stop="5946" i_length="102">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.902" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="5947" g_stop="6053" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="245" r_stop="351" r_length="107" r_score="0.991"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="6054" i_stop="6135" i_length="82">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.882" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="6136" g_stop="6767" g_length="632"/>
          <reference_exon_boundary r_type="cDNA" r_start="352" r_stop="983" r_length="632" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0020J02.1" gen_strand="+" ref_id="SGN-U573442" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>968</cumulative_length_of_scored_exons>
        <coverage percentage="0.985" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0020J02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U573442" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3079" e_stop="3238"/>
          <exon e_start="5776" e_stop="5844"/>
          <exon e_start="5947" e_stop="6053"/>
          <exon e_start="6136" e_stop="6767"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACCACCATTCATTTGTTGATTGATGATGTTGATGTGCAAAGGGGTATGGCCAAGCAGCTCATCCGTTGTTCTGTTGCAGACACCAAATGGACACAAATCCTTCAAAACCCAAGCTAGCTTTTCTAGCTACCCTCTTGCCAGCAAAGTTATGGTTAGAAGTAAGCAATTTACTCCCTCTTCCTTATATTTAACATTTAATATCAACAACTGTACTTTATCCCAAATGATAGGAGATAATCTACATATTTGTTTTACTAGGTTAAGTTAACTGGATGAATTTTATTCAATATATGAGCTAACTTAACTTCAAAAACTAGTTAATGAAAAGACTTTAACAGGATGGACCTGACTCTCATATATGACACCTGTGTTTTTTTTTTTTTGGGTTTCCATGTTCGGTAGCCACATTGGAGCCCGACTAAATTCACACACATGTCTTTTTTTTTCTTTTTTTGGGTTTCCCATCCGGTGTCCGGCACCCACATTGGAGCCCGAGTAAATTCGGATTTGCGCCGGAAAGTCCCACGTTGGGGTAAAACGCTCCCTAACAAAGGCGACTCCGTACCCAAGGGGCTTGAACCCGAGACCTCTTGGTTAAGGATGAATGAGTACTTACCGCTCCACCACAACACTTGTTGGTGACACCTGTGTCTAACTCAACCCCAAAAGCTAGCTAACGAGAGGACTACTGCGATTGCTCAACTCTATATAACCATACCACCAGTTCATTCTCCGACAAATGTGAGACTCTAACCCACTCTAACATTTTACTCTCTGTTGGCCCAGATTTACTTCCCTGCACAATGTTGTTCCTACTGGAAAAAGAGAAGGTGCTTGTTAAACTAGAGAACACATCTGAAAGATGACATTAGCTTCGTACTGGTAGCTAGCATCAGATTGAAAGTTTACAGCTTGAATCAATAATACGGTGTCTACTATCTATGTGTAGTGTGGATGATAGTTTTTGAACTTGTCTTCGTTATATGTTTCATCCATGTCCTATAAAAGCTAAACTTTTAAGACTTTTTGAAGCTTGGATACAACATCTGTTGGTCATAGCTGAAAAACTCTATTGACTTTGTAGTATCTTTTCCAAGAAACGGTGGGCGGAACTTAAATCAAAGAGAGAATTAAGTTTGTTTAGGATCTCTATTGGTGGAATTTGTTGTCGTCTGGGTACTGCTTGACACTAGTAATGTACAACCCACATTGCTTGCTTGTTATTCTGATCAAATAGTGATGTAGTAACTAGTGATAAGCTATGTTGCTTGAACTCTTCAAAAATGTTGACAGCTGCGTGTCCGATTCTCCAAAAATAGTGTATTTTTGAAGAATCCGACACGGATGTTGCATCAAAAGCAAAGAGTTCCGGAAACTTAGGTGATAAGCCTCATAAAATTGTATGCTCCTTTATACATTATCTTGACTCTGCATTATTGTGATAATACTAACTAATAAACCTCTTAGGAGTTTATATTTATTTATTTTTTTGAAAATAGTAATGTTAGGAGTTTATATTTCTTTATGTCATATCTTGTCTCTGCATCCTGGTACTAGTAAAAACTAGACATTGCAACATTGTATATGTTGATTGGCCAGATGTATTTGGTAAGACCATCGATCTATCGTTGTAATGATTCAGGATTTTGAGGTTTTACTGCCTATGAAGTGGTGGCATTTTTCTGTTTCACATAGATGATAAAAGCTAGTGATGCTCTTCAATTATGGTGGTGGTAGAATGTTAATTTTTATCAGCTGCTTTAAACTTCATGATTTCAAGTCTACAATTATGCTGCTTCCTGTTGAAGAAGTTGCTCGAAGACGCTAGATCTAGACATTTACGTGGTTCAAACCGTGCTTCCGGCTGAATAGAATTCAGATGTTTGGTCCGAGTAGTTATGATATTTGATGAAAAGTAAACACTTCATGTTATTGGGTAATATCCCACTTCTTGAGCTTAAAGGGCATGAAATTAAAAAGGGGCTACAGGCTTGTAGTGATTCAGCTAGTCATTATTTCAAATATACAGCACCTGGCTATACTTCCCGCTATAGTTGGCAAAGAAGTAAAATAGTGATATTAGAAAGCAATTCCTATGTAAAATGCATTCTGACTAACCTTGACATTCCAAGGTAGTAAGAAGAGTACTGTTAACTGACTACTGAAAGCAGTCACTGGAGATTTTTGCTTGTAAAAAATCAGAAAAAAAACGAGGAAAAATAGAAGAACGAATGAGGTTATGTAGAAGGAGATAAGTATCTCCATGTAATGCTGTTACTTTCCCTTTAGGAACTATGTGTTCAGTATCATTTTAGCGAGAAAATGTTGACTTCTTGTATTGTAAACTTGAAGGTTTTCTATTTACTAATATACATATACTGGAAACTTACTTAGTGCTGCTCAATGAAGAGTCCAGAATTTTCCTCTTTGATGCCTCTAAATGATAGATTCCATATTTAACTAAGTTAAAATCCTTCCTTAAAGTATTAAGCTATCATTGCACTAATTATTGTTCTCCATTGACCAAATTGTAGATGTAATGAATGTCATGTTAAGATTTTTTTTCTCTTTAACCCTTATGCTACAAGTTCAGAATTCACTTTCTGTCTTAGATATATCGATCACATGCTTTTCATTCAACGGTTGTGGTTCTCTCCTAAAGTTCCAAAATTTGTGTCTTATTTTTGAACCATAGATCTATCATACTCCACTGATGAAAGTTGTCTGGAGAAAATATTTTCAAATTTTGGTCATGTTGCTGAAGGTATGTACCGTTGCTTGAAGATAATTTTTCTTATCTATTCTACTCTTTCTTGTAGTTGAGATTGTGACCTGTATTTTTTAATGTATCTACATCCCTTACCAGTTAAGATTGTGAAGGATGAAGTGACTAAGAGATCAAAGGGATATGCTTTTATTCAGTACACTTCTCAAGAAAATGCCATGCTTGCTCTTGATAGCATGGATCACAAGGTTATACTCTATAAATTTGTTTTGGATTTTTAATTCCCTTCACAGTATGTCTTCTTCGTCACGTTCTCTCTTCCCTTGTCAGTACATCAATGGCAGGGTTATATTTGTGGAACTTGCAAAGCCTACAAAGAAAGACTTTGGCAGATACCCGAGAAGTTGTGGACCACCTGTGGAGAGATTACCATCTGAAAATGAAGTTCCAGACCTAAAAGAAAACTGCTAAGGTAATGTTTACGCTAGTGTTAGAGTGGCAATCATTGATAGGTGCATGACAGTTCCACAAGTCATCATTCTTGAAACTACTGTGATGCAGCTTTGGTTCGACTTGATAAAACTTCTATTGCGTAAAATTTCACTCTTAGGTCACTCCTACAGGTTACAGGACTAGTTTACTTGTTCTGTCATCGCATTCTGTGTTTTGCATGTAAACTTCACACACATATATATTGTGTTTGTTCTATTAGGCATGGCGCGTTGCATGTCAGTCCAGGTCAATTACTTCATACTAGAAGAGGCTAAGTGTACTTCCGGTCATCTTTCAAAATCTGTACTTAGAATCATGTATATTAAATCGCAAGACTTGTGCTTTCTCAACTTGATGTAACTAGTTTGATGGTCAGGTTCTGCTACTGTATATGTATTTTTAGCTTTTACGCGGTGAAAATGGACTATCATGATGTACTTTAGGCTGCTGCCAAGGGTCTGGAAGTTGCC</genome_strand>
        <mrna_strand>AAACCACCATTCATTTGTTGATTGATGATGTTGATGTGCAAAGGGGTATGGCCAAGCAGCTCATCCGTTGTTCTGTTGCAGACACCAAATGGACACAAATCCTTCAAAACCCAAGCTAGCTTTTCTAGCTACCCTCTTGCCAGCAAAGTTATGGTTAGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTATCATACTCCACTGATGAAAGTTGTCTGGAGAAAATATTTTCAAATTTTGGTCATGTTGCTGAAG......................................................................................................TTAAGATTGTGAAGGATGAAGTGACTAAAAGATCAAAGGGATATGCTTTTATTCAGTACACTTCTCAAGAAAATGCCATGCTTGCTCTTGATAGCATGGATCACAAG..................................................................................TACATCAATGGCAGGGTTATATTTGTGGAACTTGCAAAGCCTACAAAGAAAGACTTTGGCAGATACCCGAGAAGTTGTGGACCACCTGTGGAGAGATTACCATCTGAAAATGAAGTTCCAGACCTAAAAGAAAACTGCTAAGGTAATGTTTACGCTAGTGTTAGAGTGGCAATCATTGATAGGTGCATGACAGTTCCACAAGTCATCATTCTTGAAACTACTGTGATGCAGCTTTGGTTCGACTTGATAAAACTTCTATTGCGTAAAATTTCACTCTTAGGTCACTCCTACAGGTTACAGGACTAGTTTACTTGTTCTGTCATCGCATTCTGTGTTTTGCATGTAAACTTCACACACATATATATTGTGTTTGTTCTATTAGGCATGGCGCGTTGCATGTCAGTCCAGGTCAATTACTTCATACTAGAAGAGGCTAAGTGTACTTCCGGTCATCTTTCAAAATCTGTACTTAGAATCATGTATATTAAATCGCAAGACTTGTGCTTTCTCAACTTGATGTAACTAGTTTGATGGTCAGGTTCTGCTACTGTATATGTATTTTTAGCTTTTACGCGGTGAAAATGGACTATCATGATGTACTTTANGCTGCTGCCAAGGGTCTGAAAGTTGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U586894" ref_strand="+" ref_description="SGN-U586894 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>gagcatcagattgaaagtttacagcttgaatcaataatacggtgtctactatctatgtgtagtgtggatgatagtttttgaacttgtcttcgttatatgtttcatccatgtcctataaaagctaaacttttaagactttttgaagcttggatacaacatctgttggtcatagctgaaaaactctattgactttgtagtatcttttccaagaaacggtgggcggaacttaaatcaaagagagaattaagtttgtttaggatctctattggtggaatttgttgtcgtctgggtactgcttgacactagtaatgtacaacccacattgcttgcttgttattctgatcaaatagtgatgtagtaactagtgataagctatgttgcttgaactcttcaaaaatgttgacagctgcgtgtccgattctccaaaaatagtgtatttttgaagaatccgaccggatgttgcatcaaaagcaaagaattccggaaact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0020J02.1" temp_strand="+" temp_description="C02SLm0020J02.1  AC226519.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0020J02 sequenced_by:kribb upload_account_name:korea">
        <position start="3669" stop="4757"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3968" g_stop="4457" g_length="490"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="489" r_length="489" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0020J02.1" gen_strand="+" ref_id="SGN-U586894" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>490</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0020J02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U586894" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3968" e_stop="4457"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGCATCAGATTGAAAGTTTACAGCTTGAATCAATAATACGGTGTCTACTATCTATGTGTAGTGTGGATGATAGTTTTTGAACTTGTCTTCGTTATATGTTTCATCCATGTCCTATAAAAGCTAAACTTTTAAGACTTTTTGAAGCTTGGATACAACATCTGTTGGTCATAGCTGAAAAACTCTATTGACTTTGTAGTATCTTTTCCAAGAAACGGTGGGCGGAACTTAAATCAAAGAGAGAATTAAGTTTGTTTAGGATCTCTATTGGTGGAATTTGTTGTCGTCTGGGTACTGCTTGACACTAGTAATGTACAACCCACATTGCTTGCTTGTTATTCTGATCAAATAGTGATGTAGTAACTAGTGATAAGCTATGTTGCTTGAACTCTTCAAAAATGTTGACAGCTGCGTGTCCGATTCTCCAAAAATAGTGTATTTTTGAAGAATCCGACACGGATGTTGCATCAAAAGCAAAGAGTTCCGGAAACT</genome_strand>
        <mrna_strand>GAGCATCAGATTGAAAGTTTACAGCTTGAATCAATAATACGGTGTCTACTATCTATGTGTAGTGTGGATGATAGTTTTTGAACTTGTCTTCGTTATATGTTTCATCCATGTCCTATAAAAGCTAAACTTTTAAGACTTTTTGAAGCTTGGATACAACATCTGTTGGTCATAGCTGAAAAACTCTATTGACTTTGTAGTATCTTTTCCAAGAAACGGTGGGCGGAACTTAAATCAAAGAGAGAATTAAGTTTGTTTAGGATCTCTATTGGTGGAATTTGTTGTCGTCTGGGTACTGCTTGACACTAGTAATGTACAACCCACATTGCTTGCTTGTTATTCTGATCAAATAGTGATGTAGTAACTAGTGATAAGCTATGTTGCTTGAACTCTTCAAAAATGTTGACAGCTGCGTGTCCGATTCTCCAAAAATAGTGTATTTTTGAAGAATCCGAC-CGGATGTTGCATCAAAAGCAAAGAATTCCGGAAACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U568336" ref_strand="+" ref_description="SGN-U568336 Tomato 200607#2 [20 ESTs aligned] (*GB) gi|147777300|emb|CAN64609.1| (e_value=7e-106) hypothetical; (*ATH) AT2G32260.1 (e_value=2e-99)  Symbol: None | cholinephosphate cytidylyltransferase, putative / phosphorylcholine transferase, putative / CTP:phosphocholine cytidylyltransferase, putative, strong similarity to CTP:phosphocholine cytidylyltransferase (Brassica napus) GI:1418125; c... ; (*SWP) sp|Q9Y5K3|PCY1B_HUMAN (e_value=6e-62) Choline-phosphate cytidylyltransferase B OS=Homo sapiens GN=PCYT1B; ">
      <seq>ggggagaggagtgatgggtgtggggtggagaagaaacaaaagaggttaaatataagaagacttttttttttaaaaaaaaaattacaatttaagcgttacaattgtatttggagaagagagagagaagagagaagggcgataatactatagtaatggagaatggaggaggaggaggagaagatccacaattagaaccaccaccacagccgcagcgacggttgaagccgatcccaccgaatccaccgccaacagatcggccggctcgtatttacgccgacggaatctacgatctctttcacttcggacatgctcgcgccctcgaacaagctaagaaactattgcctaacgctcagcttcttgttggatgctgcaatgatgaaatcactcacaaattcaagggaaaaactgttatgaatgaaaaggagcgatatgaatctttgcgccactgcagatgggttgatgaagttattccagatgcgccttgggttgtaaccccagagttcattgagaaacatcggattgactatgtggcacatgacgctcttccttatgcggatgcaagtggagctggaaatgatgtttacgagtatgttaagtccattggtaagttcttggagaccaagcggactgatggaatatctacttcagatttaataatgaggattgtaaaagactacaatgaatatgtgatgcgcaatttggacagaggatattcaagaacggatcttggtctgagctacgtgaaggaaaaaaggctgagagtgaacaggggtttgaaaaagttgcatgagagagtaaagaaacaacaagagaaagtggaagagaagatacaaacagtagcaaagcatcgaaatatttgggtggagaatgctgatagattggttgctggtttccttgagatgtttgaagagggttgccacaaaatgggaactgtcataagagaccgaattcaagaacagatgaggaccaagagtataaaagggcttctatatgacaaagaagaggatgatgatgaatatgactactattacgggagcagtgacgatgatgaagaatactacgatggtgaagatgaagaatagggttgttcactttctcatgttatgtggtgatgtaaaatgtagtttatggatcaagttggatgaagatgtattatgtcctaacgtttggatgcgcgtgtgatatgcgtgttttattttggtagaatgtagtggcaattagttgtgttgtaaaccgtgatcaagcatagtcttgtaccataacgctgtcaatcagagtgatttgtcta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0020J02.1" temp_strand="+" temp_description="C02SLm0020J02.1  AC226519.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0020J02 sequenced_by:kribb upload_account_name:korea">
        <position start="10150" stop="17818"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10449" g_stop="10785" g_length="337"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="337" r_length="337" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10786" i_stop="11146" i_length="361">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11147" g_stop="11260" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="338" r_stop="451" r_length="114" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11261" i_stop="13199" i_length="1939">
            <donor d_prob="0.913" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="13200" g_stop="13295" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="452" r_stop="547" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="13296" i_stop="13560" i_length="265">
            <donor d_prob="0.719" d_score="1.00"/>
            <acceptor a_prob="0.966" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="13561" g_stop="13603" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="548" r_stop="590" r_length="43" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="13604" i_stop="13897" i_length="294">
            <donor d_prob="0.922" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="13898" g_stop="14053" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="591" r_stop="746" r_length="156" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="14054" i_stop="14336" i_length="283">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="14337" g_stop="14417" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="747" r_stop="827" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="14418" i_stop="16907" i_length="2490">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.264" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="16908" g_stop="17006" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="828" r_stop="926" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="17007" i_stop="17156" i_length="150">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="17157" g_stop="17518" g_length="362"/>
          <reference_exon_boundary r_type="cDNA" r_start="927" r_stop="1288" r_length="362" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0020J02.1" gen_strand="+" ref_id="SGN-U568336" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1288</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0020J02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U568336" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10449" e_stop="10785"/>
          <exon e_start="11147" e_stop="11260"/>
          <exon e_start="13200" e_stop="13295"/>
          <exon e_start="13561" e_stop="13603"/>
          <exon e_start="13898" e_stop="14053"/>
          <exon e_start="14337" e_stop="14417"/>
          <exon e_start="16908" e_stop="17006"/>
          <exon e_start="17157" e_stop="17518"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGCAGAGGAGTGATGGGTGTGGGGTGGAGAAGAAACAAAAGAGGTTAAATATAAGAAGACTTTTTTTTTTAAAAAAAAAATTACAATTTAAGCGTTACAATTGTATTTGGAGAAGAGAGAGAGAAGAGAGAAGGGCGATAATACTATAGTAATGGAGAATGGAGGAGGAGGAGGAGAAGATCCACAATTAGAACCACCACCACAGCCGCAGCGACGGTTGAAGCCGATCCCACCGAATCCACCGCCAACAGATCGGCCGGCTCGTATTTACGCCGACGGAATCTACGATCTCTTTCACTTCGGACATGCTCGCGCCCTCGAACAAGCTAAGAAACTGTATGTTTTCTCCTATTTTCATCCGTCGTAATACTCTATATATGATTTTTAGAATCATTAATTGACTTTTATTGTGAAAATTTCATGCCTTTTATATTCTCTATTGTGATGCTGGATTTCTGAGTGATTGTGAGAGGGATCCAATGAGATATCTGCTTGATTTCTTCTCACGTAGGTAAGCAAGACTAGGTGAGAAGACTTATGTGTCGGTGAAAGAAGAAAACCAAATAGGTGTTTGTCTAAGTTGTTGTTTTTTATTCTTATTGGAATATTATTAGTTGTATGATTGTAGAGGCATGAAGAATTTGTGAAATTGAACATACTTTTACTTTAGACTGAATTATTCATTGCCTAAATGTAGATTGCCTAACGCTCAGCTTCTTGTTGGATGCTGCAATGATGAAATCACTCACAAATTCAAGGGAAAAACTGTTATGAATGAAAAGGAGCGATATGAATCTTTGCGCCACTGCAGGTTGGTTTTATGGGGTTGTCAATTATGTTTTAAGTTTAATGTTTTTCCAGTCAGAGCATAATAAAATGATCTTTCTTCGTGAAATGATCTGAGTATATCTAATTGCCGGGGTTAGATTCATTCAGTTGTCTGATGTCTTCATAGTACATTTACAAATATATGAAGTTATGTTTTCATGTAGATGTTTCTTATATTGTGTTTATTGAGGGTAACTTTGATTTTTAAAATGATTGTAGTTGTTTGTTCGTTTTCCTTTCAGTTGTGAATGAGATGAATAGTTGAGGTAGTTATTTTGTATAAAAAATGGCTGTTGTTGTGACAAATAAGAGACACAAGGATGAGAGTAATATAGCATGTGTGAAGATCATCTTTTTATAAGATAATGAATTTCATAAGGCATCAAGAAGATGCAAAATTTACGGAAGGTAGAAAGTAAAAGACATTGTTAGCTATATTAAAAAGTAAAAGGGAGGCCATCGTGTTGGGATTACATTGCACACAAAATCATTAAATCTTTGGGGAATCACATCGATTCAAGATTCAACTTGGCTAGTTCAAACTCATATATTGATATATGTGTTGGAACCAGCCAAATTGAATCTCGAATGGATGTGATTCCCCAAAATTTTAATGATTTTGTGTGCAATGTAATCCCAAAACAATGGCCTCGCCTTCTGCTATGTAATATAGATAACAATTTAAATTGGGAAGTGTACCAACATTTAATTCTGGGAAGACAAATGGTTAGGGGGATCTACCCTAAAGAATGAATTTCCAAGCTTGTATCAGATAGCTCAGAACATAACTTTACCATCTCTCAGAATTGGCAAAATAACTGCTGGCAAATACAGTTCAGGAGGAATATTTAAGATTGGGAACTGCCTCACCTTATAGAGGTATGGCCTAAATTAGAACACTCTTGTCAAGTCATGTATTACTGACAACCTAAAATGGAAGGATGGTCCCTATTCAGTATCGGGAGGCTTTGCTCATCTATGCTCTCCTACAATGAGGTAATTGATAGATGGCTCTGGAAATTAAAGCTTCTCTCAAGATCATATGTTCTAGCTGGACAGCTTTACATGAAGCATGCCTTGCATAGGATAAACTCTACAGAAGGAAAATTCAGAGTCAGTAGATGCTTCATATGCCTAATCAAATTAGATCCCAATCGACTTCTCTTGCTTCACTTCACAATCATCACAGATATTTGGGGCATGTTTTTCTCTATTTTCGGTCTTAAAGCATAAAAGAGGCCTATGAACGCTGGTCTAAATCGAAAGTTGATTAGTCCATCGCAGATGATTCCTGCCTTATCTTTTGAGGACAGAAAAGAATTATAGATGTTTTTATGGGATTTCAACACCTACTTATTTTCTGAAGGTCTGTTATGGTTGTATAGTTTGCAGAATCTCTCCCCTGTAAATTGTCCTATTAATTTTTTGAACTTCATCAGCTCTTTAGCATTAGCTTAGGCTTTGTGGCCTATGGCTGATTATCTTTTGTGCTTCTGATCAATGTCAAACGGATTGGTAGAAGAAATGGTGAGAAAGACAGAGACAGAAAGGAACTCAAAATATTTTTGAAGACAAAAGCAGTTATATTTAGAAGATCAAGATGAATCGTCTTTCTTTGTGCTATTTTTGGTGTACGGGATCTTTTTGATCATATATGGGACTGGATAGATTTAATAGGTGGCTTGCAAGTGACTGTCACATCAGGCTTCCCTTTTTTTCTCTTTCTGAGTTGTACATACAGTTCTCAGCCCTTGCCAGGTGCTGACTTTAGTATCAGTACAAGCCTGTTACCTTCCTTTTGGAAAAAAAAATGCCGCTTATGATGGTTCTAATATTGTAGCTTCTAATGGTTGATATCTGCCTTTATCTTTAATTTGTATGGTGCATTTTCAAGTAGGTTAATTGTGTATGCATTGTTGCAGATGGGTTGATGAAGTTATTCCAGATGCGCCTTGGGTTGTAACCCCAGAGTTCATTGAGAAACATCGGATTGACTATGTGGCACATGACGCTCTTCCGTAAGGCAAAACGGCCCACAAAATTTTTACTTCTGTTGATTTGCATAAGCGTCCCTGTTTCCTTGGAACTATATTTGGACCAGCTTTTGATATGCCTTATCTGCTTATTCATTATTTTACTTTAAGATGGATTTAGCTTTACATAACTAATTTAAGGTCTTCCCCCGTTGTGTGATTTTGTTTTATTTGTTCGTATTGTTGTTTCATTCTGGGTTCCGAGATATTTTTTCTTTTAATTTTTCGTCTTCTTGTCTGTACACGTCAGTTATGCGGATGCAAGTGGAGCTGGAAATGATGTTTACGAGTATGTAAGTCCAAAATGAACTTCAGTTTATCATACGCGACTTTTACCTTGTTCATATGATGTTTCTGTTAAACAATTTAGTTTGTGTCTGTACAATGTTTTTGTGTGCATAAACCGGGGTGATTTGCAAATTGTTCATCTTTTTAATATGCTGTATGAAAGTCGGTCTTTATTTACTTATTTTGCTCATTGTTGATCCGTTTTAATCAGTGTAAGATATCTAGTTTGATATTCACTCTTTAATGCCTACTTTAATGCCATTGTGTAATGTGAATATTTTTAAAACCTGTGTTATTAGGTTAAGTCCATTGGTAAGTTCTTGGAGACCAAGCGGACTGATGGAATATCTACTTCAGATTTAATAATGAGGATTGTAAAAGACTACAATGAATATGTGATGCGCAATTTGGACAGAGGATATTCAAGAACGGATCTTGGTCTGAGCTACGTGAAGGTATACTCTTTAGTGTTTTGATTTGGTGATGTAGTAATACCTTACCTTTCTGAGGAAAGAATTGTTCTTGTTTTGCAAATGCAATGAAAAGAAAAAGGGTGCTAATTGAATTATGTAGACTTTCTGCTACGCGACAAAAAAAATAAATTATGTAGACTTTCTGCTAGCATTAGTTTTTTTATTCCTCACTAATAATAGTAGAATCAATGGCGCAGAGTCAAAGATTACATTTTCTTTCATTATTTGCTTTGCCAGGTATTAACTTCATCATTGCCTCTTTTAGGAAAAAAGGCTGAGAGTGAACAGGGGTTTGAAAAAGTTGCATGAGAGAGTAAAGAAACAACAAGAGAAAGTGGAAGAGAAGGTATATTCTTAAGTATTTGTCTGCTTTTCATTTCTCTATTTCGAATACAAACTTGTCAGAAGAGTCTCCAATCTCTATGGAATATGTGGTTTTTGAATAAAGTTTGGCAATTATCTGGAAAAAGCAAGGAAAAAGGATATTGAGATCTATGTCTTCTGTCATTTATGCAAATTATTTTTTTAAAAAGAAGGTAACCATATTTTATATAACCTAAAGAGTACATAGAGAAACATAGTTACAGGAACCCCCAAAAAAACATAAACCAATCACTTAACTAGTTACAATGACCCAATAATGTCAACTACATAATCTCTATATCTTCTGCTAGGCCTTCCTTACACCGAAAATTTGAAACAAAAATATATAAGAATATATTTTTAGTCTTCCGTTGAGTCGGCTACATCTTCAAAACACCACAGTCCACACGTTCCTTTTCTTTCCTATTGTCCACCAGATGCACATAGGAATAATTCTCCACCATCTCTTCTGCCTTACAAAATTGTCTGGACCATTCCAGCATGCTAGCAACTCAGCAGTTATCTTAATTATCCATTTGAGCCTTTCTATACTCAGTAAGAGCTGTACAGATTACAGGTAACTTACATGCTAGCAACTCAGCAGTTTTCTTAATTATCCATTTGAGCCTTTCCATACTCAGTAAGAGCTGTACAGATTACAGGTAACTTTGCAATGGATAAGTAGGTGGCTACTTGTTTCATTCATTATCCATCTGAACCCTTTCATACTCGGTAAGAGCTGCTTCAGAGTAGTGGTAACTTTGCAATGGATAAATAATAGATGGCTCTTTATTTCATTTTCTCTCCACATAGAAGGCATTTAGAACACATAGAAATATTGTGCAAATGACACTTTGAGCAATGAAGGGTAGCACGGGAAGCAATATGATGGTATATAAGGTAAGGTTGAATTCGAGGATACAATTGAATTGCCTCTCTACCTCACAAAGGTAGGCAGTAGGGGTAAGGTTTGCATAGACCCTACCCTATCCAGACCCCACTGGTGGGACTATACTGGTATATTGTTGTTGTTGTGGTGGTGAATATTATAAAGTGGAGGTGACTTGGTTTAACACATCCTACAATGGAATATCAACATTATATGTCAATGTTAGGTGTTCTAATCTTTTATCATCGCTGTGCAACTGACATGTTCTTGTAGGTTCTCGTATTATTAGATCCTTTATATTTAAAGCTGACAACATTTACATAAGGTCAAGTTTGTCCCCAAGGAGATGAATCATTTGTATTATGTCATGCATGCATAGGAACTTTTGGATACAAAACAATAGCTAACCACATTTTCATATCAGCTATATTAGCCTGGATCGATACTTGTGCATTTAGTTGCTATTTCTTATGAGTAGGGTGATGTCCAACCACTTTTAGAAGCATAAGTAGATATCTTTGCCGACCGAATTGTTTGTTTTAGTAGATGGATGGTTCTTTTGTTTAATTCAAATCTGGTGTGGTTTCATTTGTTGAGAAGCCTGGAGCTTTTAATTAGTATAAGTAATTTTCTCAGCCTATAATGAAGTGTTCATGAAATTTTGTGGTTTGCTTCCCCATTATGATGTGGCTCAGTTGATAGTAAACAAATGTATTTTTTTTAATAGGGATAGTTTATATCTTTATTTCTATCATTGAGCTTGCATCCGATTATGGTTAATGTTGTGTTGCAATGTGTACTACCTTCCGGGTAAATTTTCCTCTTACTATTCTACTAATTACTACTCCCTCTATGTGACACTCTTTCCTTTTTAGTTTGTCCAAAAAGAATGACATCTTCCCAAATTTAGTAAAATTTAACTTCAAACTTTCCATTTTATCCCTAGCGAAATGATTTATTGCCACGTAAATTTCTATAGGTTAAAATCTTCCTTTTAAAAAAAAATGAACTTGAAGCTTCCTTTTAGTCAAATGCCTTCACATAAATTGGAAGGAACTGCCAACGCAACCAAACCCCGTTCTTTTATATTATTTGTTGGAATAGATAGTAGATATATGATCGGATGCATAAGTTGGTAAGGGCTGTTTAGAGTTGGACATAAAATTACTAATTCAAATTGAAATGTACAATGATTGGGGAAATTGGAACGGGTGGAGTATTATTTCCGATTCGTTATAGTTTATCACCTTGTAGAATTTGGGTGGTGGAGATGGTGGGAGTCGCAATTATCTGGACTTTTGAAGAGTGAGCTGAAGTGCTAAACTATGTAGACGAAGCTACTTCTCATCTTATATGCTAGGTTTCTGAGTAAAGGAAGCTGTTTCTTCTCCATTGATTATTCTCACTATGTCTTTTGTACTCAGTGTTACCAAAAATAGAGCAGTATGTAGCAGTTCTGATAGCTTTTTCGTAATTTAATGAATTAAACATAAGACGGATGCTTGTCGTCATTGAAGAACCATCACTTTAAGCTATTTCTAGTCTTCTAGCACAAAACACGCTAAAAAAGAGTACCTGTTGCAGATACAAACAGTAGCAAAGCATCGAAATATTTGGGTGGAGAATGCTGATAGATTGGTTGCTGGTTTCCTTGAGATGTTTGAAGAGGGTTGCCACAAAATGGTAAGATCTCTGTGCTGCTTTTCCCATCCCTCTCTTTTCCTCTTCTCTTATCTGGTGTTCAATCCCCTAGGGTTTTCCAGTAGCACCTCCCACACACGAATGAGAGTGGTTTATATTTGCACTTCTGATGACACATTGAAATTTCAACAGGGAACTGTCATAAGAGACCGAATTCAAGAACAGATGAGGACCAAGAGTATAAAAGGGCTTCTATATGACAAAGAAGAGGATGATGATGAATATGACTACTATTACGGGAGCAGTGACGATGATGAAGAATACTACGATGGTGAAGATGAAGAATAGGGTTGTTCACTTTCTCATGTTATGTGGTGATGTAAAATGTAGTTTATGGATCAAGTTGGATGAAGATGTATTATGTCCTAACGTTTGGATGCGCGTGTGATATGCGTGTTTTATTTTGGTAGAATGTAGTGGCAATTAGTTGTGTTGTAAACCGTGATCAAGCATAGTCTTGTACCATAACGCTGTCAATCAGAGTGATTTGTCTA</genome_strand>
        <mrna_strand>GGGGAGAGGAGTGATGGGTGTGGGGTGGAGAAGAAACAAAAGAGGTTAAATATAAGAAGACTTTTTTTTTTAAAAAAAAAATTACAATTTAAGCGTTACAATTGTATTTGGAGAAGAGAGAGAGAAGAGAGAAGGGCGATAATACTATAGTAATGGAGAATGGAGGAGGAGGAGGAGAAGATCCACAATTAGAACCACCACCACAGCCGCAGCGACGGTTGAAGCCGATCCCACCGAATCCACCGCCAACAGATCGGCCGGCTCGTATTTACGCCGACGGAATCTACGATCTCTTTCACTTCGGACATGCTCGCGCCCTCGAACAAGCTAAGAAACT.........................................................................................................................................................................................................................................................................................................................................................................ATTGCCTAACGCTCAGCTTCTTGTTGGATGCTGCAATGATGAAATCACTCACAAATTCAAGGGAAAAACTGTTATGAATGAAAAGGAGCGATATGAATCTTTGCGCCACTGCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGTTGATGAAGTTATTCCAGATGCGCCTTGGGTTGTAACCCCAGAGTTCATTGAGAAACATCGGATTGACTATGTGGCACATGACGCTCTTCC.........................................................................................................................................................................................................................................................................TTATGCGGATGCAAGTGGAGCTGGAAATGATGTTTACGAGTAT......................................................................................................................................................................................................................................................................................................GTTAAGTCCATTGGTAAGTTCTTGGAGACCAAGCGGACTGATGGAATATCTACTTCAGATTTAATAATGAGGATTGTAAAAGACTACAATGAATATGTGATGCGCAATTTGGACAGAGGATATTCAAGAACGGATCTTGGTCTGAGCTACGTGAAG...........................................................................................................................................................................................................................................................................................GAAAAAAGGCTGAGAGTGAACAGGGGTTTGAAAAAGTTGCATGAGAGAGTAAAGAAACAACAAGAGAAAGTGGAAGAGAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACAAACAGTAGCAAAGCATCGAAATATTTGGGTGGAGAATGCTGATAGATTGGTTGCTGGTTTCCTTGAGATGTTTGAAGAGGGTTGCCACAAAATG......................................................................................................................................................GGAACTGTCATAAGAGACCGAATTCAAGAACAGATGAGGACCAAGAGTATAAAAGGGCTTCTATATGACAAAGAAGAGGATGATGATGAATATGACTACTATTACGGGAGCAGTGACGATGATGAAGAATACTACGATGGTGAAGATGAAGAATAGGGTTGTTCACTTTCTCATGTTATGTGGTGATGTAAAATGTAGTTTATGGATCAAGTTGGATGAAGATGTATTATGTCCTAACGTTTGGATGCGCGTGTGATATGCGTGTTTTATTTTGGTAGAATGTAGTGGCAATTAGTTGTGTTGTAAACCGTGATCAAGCATAGTCTTGTACCATAACGCTGTCAATCAGAGTGATTTGTCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U603534" ref_strand="+" ref_description="SGN-U603534 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>gccttctgctatgtaatatagataacaatttaaattgggaagtgtaccaacatttaattctgggaagacaaatggttagggggatctaccctaaagaatgaatttccaagcttgtatcagatagctcagaacataactttaccatctctcaaaattggcaaaataactgctggcaaatacagttcaggaggaatatttaagattgggaactgcctcaccttatagaggtatggcctaaattanaacactcttgtcaagtcatgtattactgacaacctaaaatggaaggatggtccctattcagtatcgggaggctttgctcatctatgctctcctacaatgaggtaattgatanatggctctggaaattaaagcttctctcaagatcatatgttctagctggacagctttacatgaagcatgccttgcataggataaactctacagaaggaaaattcagagtcagtagatgcttcatatgcctaatcaaattagatcccaatcgacttctcttgcttcacttcacaatcatcacagatatttggggcatgtttttctctattttcggtcttaaagcataaaagaggcctatgaacgctggtctaaatcgaaagttgantantccatcgcagangattcctgncttatcttttgaggacagaaaanaantatagatgtttttatgggntttcnacacctacttattttctgaagg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0020J02.1" temp_strand="+" temp_description="C02SLm0020J02.1  AC226519.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0020J02 sequenced_by:kribb upload_account_name:korea">
        <position start="11630" stop="12944"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11930" g_stop="12644" g_length="715"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="715" r_length="715" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0020J02.1" gen_strand="+" ref_id="SGN-U603534" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>715</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0020J02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U603534" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11930" e_stop="12644"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCTTCTGCTATGTAATATAGATAACAATTTAAATTGGGAAGTGTACCAACATTTAATTCTGGGAAGACAAATGGTTAGGGGGATCTACCCTAAAGAATGAATTTCCAAGCTTGTATCAGATAGCTCAGAACATAACTTTACCATCTCTCAGAATTGGCAAAATAACTGCTGGCAAATACAGTTCAGGAGGAATATTTAAGATTGGGAACTGCCTCACCTTATAGAGGTATGGCCTAAATTAGAACACTCTTGTCAAGTCATGTATTACTGACAACCTAAAATGGAAGGATGGTCCCTATTCAGTATCGGGAGGCTTTGCTCATCTATGCTCTCCTACAATGAGGTAATTGATAGATGGCTCTGGAAATTAAAGCTTCTCTCAAGATCATATGTTCTAGCTGGACAGCTTTACATGAAGCATGCCTTGCATAGGATAAACTCTACAGAAGGAAAATTCAGAGTCAGTAGATGCTTCATATGCCTAATCAAATTAGATCCCAATCGACTTCTCTTGCTTCACTTCACAATCATCACAGATATTTGGGGCATGTTTTTCTCTATTTTCGGTCTTAAAGCATAAAAGAGGCCTATGAACGCTGGTCTAAATCGAAAGTTGATTAGTCCATCGCAGATGATTCCTGCCTTATCTTTTGAGGACAGAAAAGAATTATAGATGTTTTTATGGGATTTCAACACCTACTTATTTTCTGAAGG</genome_strand>
        <mrna_strand>GCCTTCTGCTATGTAATATAGATAACAATTTAAATTGGGAAGTGTACCAACATTTAATTCTGGGAAGACAAATGGTTAGGGGGATCTACCCTAAAGAATGAATTTCCAAGCTTGTATCAGATAGCTCAGAACATAACTTTACCATCTCTCAAAATTGGCAAAATAACTGCTGGCAAATACAGTTCAGGAGGAATATTTAAGATTGGGAACTGCCTCACCTTATAGAGGTATGGCCTAAATTANAACACTCTTGTCAAGTCATGTATTACTGACAACCTAAAATGGAAGGATGGTCCCTATTCAGTATCGGGAGGCTTTGCTCATCTATGCTCTCCTACAATGAGGTAATTGATANATGGCTCTGGAAATTAAAGCTTCTCTCAAGATCATATGTTCTAGCTGGACAGCTTTACATGAAGCATGCCTTGCATAGGATAAACTCTACAGAAGGAAAATTCAGAGTCAGTAGATGCTTCATATGCCTAATCAAATTAGATCCCAATCGACTTCTCTTGCTTCACTTCACAATCATCACAGATATTTGGGGCATGTTTTTCTCTATTTTCGGTCTTAAAGCATAAAAGAGGCCTATGAACGCTGGTCTAAATCGAAAGTTGANTANTCCATCGCAGANGATTCCTGNCTTATCTTTTGAGGACAGAAAANAANTATAGATGTTTTTATGGGNTTTCNACACCTACTTATTTTCTGAAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U596906" ref_strand="+" ref_description="SGN-U596906 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>aaaacaaatcactcgtgattgacagcgttatggtacaaaactatgcttgatcacggtttacaacacaactaattgccactacattctaccaaaataaaacacccatatcacacccgcatccaaacgttaggacataaaacatcttcatccaacttgatccataaactacattttacatccccccataacaggaaaaagtgaacaaccctattcttcatcttcaccatcgtaatattcttcatcatcgtccctgcccccgtaaaagtaatcatattcatcatccccctcttctttggcaaaaaaaagcccttttaaacccttggccctcatctggtctggaattcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0020J02.1" temp_strand="-" temp_description="C02SLm0020J02.1  AC226519.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0020J02 sequenced_by:kribb upload_account_name:korea">
        <position start="17817" stop="16875"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17518" g_stop="17175" g_length="344"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="345" r_length="345" r_score="0.919"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0020J02.1" gen_strand="-" ref_id="SGN-U596906" ref_strand="+">
        <total_alignment_score>0.919</total_alignment_score>
        <cumulative_length_of_scored_exons>344</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0020J02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U596906" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17518" e_stop="17175"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGACAAATCACTC-TGATTGACAGCGTTATGGTACAAGACTATGCTTGATCACGGTTTACAACACAACTAATTGCCACTACATTCTACCAAAATAAAACACGCATATCACACGCGCATCCAAACGTTAGGACATAATACATCTTCATCCAACTTGATCCATAAACTACATTTTACATCACCACATAACATGAGAAAGTGAACAACCCTATTCTTCATCTTCACCATCGTAGTATTCTTCATCATCGTCACTGCTCCCGTAATAGTAGTCATATTCATCATCATCCTCTTCTTTGTCATATAGAAGCCCTTTTATACTCTTGGTCCTCATCTGTTCTTGAATTCG</genome_strand>
        <mrna_strand>AAAACAAATCACTCGTGATTGACAGCGTTATGGTACAAAACTATGCTTGATCACGGTTTACAACACAACTAATTGCCACTACATTCTACCAAAATAAAACACCCATATCACACCCGCATCCAAACGTTAGGACATAAAACATCTTCATCCAACTTGATCCATAAACTACATTTTACATCCCCCCATAACAGGAAAAAGTGAACAACCCTATTCTTCATCTTCACCATCGTAATATTCTTCATCATCGTCCCTGCCCCCGTAAAAGTAATCATATTCATCATCCCCCTCTTCTTTGGCAAAAAAAAGCCCTTTTAAACCCTTGGCCCTCATCTGGTCTGGAATTCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U589113" ref_strand="+" ref_description="SGN-U589113 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157351276|emb|CAO41463.1| (e_value=3e-30) unnamed; (*ATH) AT2G40430.2 (e_value=1e-28) |; (*SWP) sp|O22892|GSR2_ARATH (e_value=1e-27) Uncharacterized protein At2g40430 OS=Arabidopsis thaliana GN=At2g40430; ">
      <seq>gcctatgtgtatttggagccctaattcctaaatcaaaactcacaggccacagcctccagctctctcttttttgttctctgaactctcagagacactgtgtcggcgaccagcaagcacagcggcgcagcaaaactctcgtctgtcgactctctatctctcagcgtgacggattattggtttggccctccctgtttgtgcagcagctgtcagagatccatatcccattctacgagagttttagcttgccaaatctcgacagatttattcttaacactgtccactaatctctttgacttagctacttgttcacttaggaatcaagagtagagagatggggaagaataagagctcaaggaaagggaagaaggcatggagagccaacataagtacggaggatattgaagatttctttgacaactccactaaagatgctctttcaggcggttctcttgctcaagttcccagtgactctctcttttatgtcgacaaatccagagatctttctgtcaaacggaaaattgaaaaacaccgggagaaagtacttcgatatgatagtatactacaaagcaatgcct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0020J02.1" temp_strand="+" temp_description="C02SLm0020J02.1  AC226519.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0020J02 sequenced_by:kribb upload_account_name:korea">
        <position start="18319" stop="22911"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18618" g_stop="18789" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="172" r_length="172" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18790" i_stop="21393" i_length="2604">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="21394" g_stop="21545" g_length="152"/>
          <reference_exon_boundary r_type="cDNA" r_start="173" r_stop="324" r_length="152" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="21546" i_stop="21633" i_length="88">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.528" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="21634" g_stop="21806" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="325" r_stop="497" r_length="173" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="21807" i_stop="22533" i_length="727">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.706" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="22534" g_stop="22611" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="498" r_stop="575" r_length="78" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0020J02.1" gen_strand="+" ref_id="SGN-U589113" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>575</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0020J02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U589113" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18618" e_stop="18789"/>
          <exon e_start="21394" e_stop="21545"/>
          <exon e_start="21634" e_stop="21806"/>
          <exon e_start="22534" e_stop="22611"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCTATGTGTATTTGGAGCCCTAATTCCTAAATCAAAACTCACAGGCCACAGCCTCCAGCTCTCTCTTTTTTGTTCTCTGAACTCTCAGAGACACTGTGTCGGCGACCAGCAAGCACAGCGGCGCAGCAAAACTCTCGTCTGTCGACTCTCTATCTCTCAGCGTGACGGATTGTAAGCTACCTCATCTCCCATTAGTAATATTTAGTATGTATCTCTCGGTCTCTTTTCTCTGCCTACAGCAAAACAGCAAGCTAAATTTTAAGATATTTCTGTTGTTTTAAGTATTGAATTCTTGTGTTGAATGTTTTTGGGCTGGCTGCCTTGTTCCTGGTAATGTTATTTTATATTTGGATTGTGTTTCTGGCTTGCTGTTGCTGAAGTGTTTTGCCAAGTTAGAATTTTTTTTTTTGTGACTGCTAAGCAACTTGCTAATTGGCATGGCTGCTGCGGTGCTGGCAACTGGTTAGACTATTATGTGCAAGTGAGCCGTGCTGTACTGCTCCGAGCCTGCGAGTGGGCTGCCTGCTATGTTAGTTCACCTTGAAATAGACCAAATTTAGTTCATAGTTTAGCCTATTAAGTTAGTTCATTGTTATAAGAGCAGTGCTAACTTATTACTTAAGTATTGAATGTTGATACTTGACAACAGCGAAGAATGCTAGGCTGTTAGGCTGAGAAGAGTGTTATAAAAAAAGAGACATTACGAGACTAAGAGCCTTTATTTATTTGAATTTTCATGTTAACTTTATAAGTTAAATATTTTGATAATTTTGTTCTCATTTGCACCAAAAAACCATTTTAAAAACACTGAACCGAAGTTTGGTTCGGTATTTGGTACACACTATTTCAAATCTGAATACCGAAGAACCGAACCGGATTTGATACAAGAAAGCAAATAAAGAAAAAAAAAGTAAGACAGTTGAATCTTCTAGCCTTAAACTAAAGATTGAAACGGACTGTACTGTTCCTTTTTATTTTTAAGAGTACTTATTAATTATCTTATTATTGCTAAAAAATGGTTGGGGGCCTAAGGCAAGTTCTCTATTTTCCAATGCATACAGCTGCCCCTGATTGTAAATGTGCAATACATGCAGCTGTTACCAGGCTTTACTAGTCTATGTCTACATAGAGATGTCAATGTGAGTTTGGAACCATCAAAATGAAAAGGACTAAATCCTAGAGTTAGAATCTTATCTTCTTTACTGTTTTGATTCATTAGTCTTTATGCTTTGTGTTTTTCTTTATCAGATCTAAATGAGAAAAAGAAATGGTTAGCTTAATTACAATGTGAACTAGCTCTGGAGATCAGTAGCTAATAGCTAAGTGTGATGTATGTTCATTAGATGCCATATAGGATCAGTAGTCTATGAACTATGAAGAGGTCAGTAAGATGAGTGATCAGTCTTGTTAAGCTTAAGTCTATAATTTATTTGAACTCTATTATGTTTCTGTTAGCGGCAGCCCCTTCATGTGGATATATTGTGTTTGTATGTCGTGATTTCCTCTAGTCTAGATAGTAAAGGTTTAATAAATTTCTATCAACAAGTATTTGACTAATCAGGGATTTTTGAATTAAGGTTCTTGTTGTATTCTAGAACTTTTAGTTATCTTGCCACCTTAAAATTAGCACAAAATGGCTAAAGAATCTTGTGTTGGCCTTCTTGTTCTCATTCATAAACTTGAGATGAAGTCTTGTTGTATATGTTTTCAGCTATAAGGTTGCTGTCCAGGAGGAATATCTTTAGCTCACTTGTAAATAAAGGGAAACCCCTTCCAGTATTAGCAACATCATCTTGTGAGGGGTCTAATTGTATTATGTTCAAGACTATTTTTGTTGAGTCTCTTATTCATGAAGGGTCTAAAACTTGTGATTTTTAACTGAAATAAGTACTAAGAAATGATTTAAGGATAATCAAAAACTTGTAGATGGCCTGTTTCAGCTATGTGTTTGCAAGTCTAGTTTCAAACTTGTTTAGCTTTCCTTCATGTTTATGCTTGAGTAGTTGACTAGTTGATCTGTGACATAAGAGGCTTATCATATCCCGTTATGTGGTTGGGTAACATCTGTCTCTTTGTTTATTTAAGATCCCCTTTAACTTGAGAGGAGTTTTATTTTTGTTCAAGAAAAGATCAAGTTTGTTCAAAAATAATGCTCTCTGGTTGTGTTTGTATTTTTAAAAATGAGAAGATTTGGCATTTAAGAGAATTGTCACTGCTTACTTGAGATTAATGGTACCCCTTCCTAGTCTTGAATGGCTTAAGTATGTTGAAAACTCACTACATGAGCCCCTTTTAAAGTTCTGAACATAGCACCCTTCTTTGTTTTTTAAGTTGTGAGTAAGAAGTACTCCCTCTGTCACCAATTACTTGTCCACTTTTGAATTTGCACACCTATTAAGAAAACAATAATTGACATAGTGAGTTTACCATATTACCCCTATTAATTATGAAGTGGATGAATTGAAACTTAAGACATTCAAGAAGTTTTTACCTTTTACAAAGTAATTAATTGAGGGTATAATAGGTAAAAAAAAATTGGCCTTTCTTGATTTGTCAAAATGGACTAGTAATTAGGGATAGAGTGAGTAGCAGTTTCCTATGCAATTATTTTTTTGCGATTATTTTCTTCATTTTACTGTTCATAAACCCATGATTGTTCAGGGACTTTTTTGCTCTGTTCGATGTGCTTACCACTTCCTAAATCCTGAATAATTAACCTTAGGATCATTAGTTAAGACTAAATCCATTAAGACTTTAGTGGTAATAATTTTCCAGATTGGTTTGGCCCTCCCTGTTTGTGCAGCAGCTGTCAGAGATCCATATCCCATTCTACGAGAGTTTTAGCTTGCCAAATCTCGACAGATTTATTCTTAACACTGTCCACTAATCTCTTTGACTTAGCTACTTGTTCACTTAGGAATCAAGAGGTATAAATTCTCAAGTGACTGTTTTACATTTATGCTAAATCTGTTTTGGGACCATGTTTTCAATATGACTTTTACTGCACTTGTTAAGTAGAGAGATGGGGAAGAATAAGAGCTCAAGGAAAGGGAAGAAGGCATGGAGAGCCAACATAAGTACGGAGGATATTGAAGATTTCTTTGACAACTCCACTAAAGATGCTCTTTCAGGCGGTTCTCTTGCTCAAGTTCCCAGTGACTCTCTCTTTTATGTCGACAAATCCAGAGGTATTCTATTTTTCAGCATTTTTTTCCCGGTTGAAAATTTCCAGAAGTATCTTTTGTTCAAGTAAATAGCAAGGTAAAAAAAAGAACAAGCCGATTTTGATATCAGGCTGGTGTTCACGTATATGTTCTAGCAGCTGATATAGTCTTTAGATGGATGGTATGTATGTGATTTACTGTTCCAACAGATGTATTGAACTAACGTTGGTTGGATAACTGGTTTACTCCACATTTGAAAATGGTATTTTCTTTTAACAGTAGTTTTTTGGTACACGGGAAATAACTGAGTGCTCTGATAATCTTCTCCAGAATTTTGTTTTGGTAGAATCAGTCAAGAGTATTGTGTACTAAGACAAGTAGACCAAATAATTCGGTATCTCATAGAGTTGTAATTATGGAAAAAATTCAATCTTGAGAGCAGATTGAACTTTCATGTCTGTTTTAGACTTGCAGTAATTGTTAGGGTGTTGCTTTTCAGTCAATGGTTCGTGTTCCCATCCAATTGTTGGCTGTAATATGAAGCCGGATGAATTTTGGAGATAGTAACTGACATTTTTGGACTAGAAGAGGGCAGTTTAGAATCACCTTAAGTACTATGTCTCTGGACTATGTAGCAGTTGATGTTCATCATGGGTGCATCTTCCTTTTCCCTTTACTGCAGTTCTGTCGTTTTTTGTTGGTGAATCCTTCTTCAGTGATCAAATGACAAGTTTTTATGTCTACAATCCAGATCTTTCTGTCAAACGGAAAATTGAAAAACACCGGGAGAAAGTACTTCGATATGATAGTATACTACAAAGCAATGCCT</genome_strand>
        <mrna_strand>GCCTATGTGTATTTGGAGCCCTAATTCCTAAATCAAAACTCACAGGCCACAGCCTCCAGCTCTCTCTTTTTTGTTCTCTGAACTCTCAGAGACACTGTGTCGGCGACCAGCAAGCACAGCGGCGCAGCAAAACTCTCGTCTGTCGACTCTCTATCTCTCAGCGTGACGGATT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGTTTGGCCCTCCCTGTTTGTGCAGCAGCTGTCAGAGATCCATATCCCATTCTACGAGAGTTTTAGCTTGCCAAATCTCGACAGATTTATTCTTAACACTGTCCACTAATCTCTTTGACTTAGCTACTTGTTCACTTAGGAATCAAGAG........................................................................................TAGAGAGATGGGGAAGAATAAGAGCTCAAGGAAAGGGAAGAAGGCATGGAGAGCCAACATAAGTACGGAGGATATTGAAGATTTCTTTGACAACTCCACTAAAGATGCTCTTTCAGGCGGTTCTCTTGCTCAAGTTCCCAGTGACTCTCTCTTTTATGTCGACAAATCCAGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTTTCTGTCAAACGGAAAATTGAAAAACACCGGGAGAAAGTACTTCGATATGATAGTATACTACAAAGCAATGCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U584477" ref_strand="+" ref_description="SGN-U584477 Tomato 200607#2 [26 ESTs aligned] (*GB) gi|157351276|emb|CAO41463.1| (e_value=3e-120) unnamed; (*ATH) AT2G40430.2 (e_value=7e-59) |; (*SWP) sp|O22892|GSR2_ARATH (e_value=7e-58) Uncharacterized protein At2g40430 OS=Arabidopsis thaliana GN=At2g40430; ">
      <seq>gctccagctctctcttttttgttctctgaactctcagagacactgtgtcggcgaccagcaagcacagcggcgcagcaaaactctcgtctgtcgactctctatctctcagcgtgacggatttagagagatggggaagaataagagctcaaggaaagggaagaaggcatggagagccaacataagtacggaggatattgaagatttctttgacaactccactaaagatgctctttcaggcggttctcttgctcaagttcccagtgactctctcttttatgtcgacaaatccagagatctttctgtcaaacggaaaattgaaaaacaccgggagaaagtacttcgatatgatagtatactacaaagcaatgcctttgttgaacctgtaccttcttcaactgggaagaaatccaagaagaaaagtaaacttcagatagccaaggatactgctcaacagggtcaaaaggattcgtctggtggagactctggcatggttgacatttggaatgataaagatgaactggtcatcaaaaccaaaaagaagcccaagacttctgttatacctgctgtggaagttgagcctccaggatgctcattcaatcctccatccgaaagtcatcaggatgcattagcttgtgctgttgcagatgaaatgcagaaaatttatagaaatgaattgggtccggagcctattccattggttgttcctggagaggtagtcaatgaagaagatatgtatttccttgaagcggacagtgggagtgacacggagaatgaaaatctagtggaagacggaaaaacagatttggataaaaggccgcaaaagcccaaaatgctgactcaagttgagaagaatcgacgggctagacgcaaagaacagttgaaagcagaagctgaagcaacaaaagcagcacaactctccaaagagattgatagcttaccggatattattcaagaaatagagagagaggaaggagaaaaacagaaacgacatctacgtcgtgtcactgctataaaagaaaaactaaaatcttgtccaccacgcttgggaaagcgcaaattcgtgcctgctcctgctcaggttttactgtctgaagagattactggttccctgcgtaaattaaagggatgttgcacccttgcaagagatcgatttaaaagcctggagaaaaggggactagttgttccttcaaaaaagagtagcaggaaatagagtgaattgcaagtaacacagataaatgttttcatcaccgcactatgagaccatcatcccgatcacctggatgagagacactgtagacagcaaggtgttggtttatgtctgcaaatttggagtggtagagctggctgctcttactgttagcaaaatggagatgtagatctgtttatcttactgatgcatatggttcattacacaatattttatagtcatggtcaagttactttgggagcaaaagtgataattaattactgatgtatctggaggcagaagattggtgtgatttctcttgatgaaccagaaatgattcccagagtcagccttttttaaattttaaaatgggaactctcataatcaatatgtaccccaaagtttttaattactctaattaggtcaactttttatttgatcacattagatcaactatatatcacaaattttgattttcaagacttgaaagacaacattttctact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0020J02.1" temp_strand="+" temp_description="C02SLm0020J02.1  AC226519.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0020J02 sequenced_by:kribb upload_account_name:korea">
        <position start="18371" stop="28196"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18670" g_stop="18789" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="120" r_length="120" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18790" i_stop="21633" i_length="2844">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.528" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="21634" g_stop="21806" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="121" r_stop="293" r_length="173" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="21807" i_stop="22533" i_length="727">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.706" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="22534" g_stop="22703" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="294" r_stop="463" r_length="170" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="22704" i_stop="22871" i_length="168">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="22872" g_stop="22920" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="464" r_stop="512" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="22921" i_stop="23007" i_length="87">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="23008" g_stop="23033" g_length="26"/>
          <reference_exon_boundary r_type="cDNA" r_start="513" r_stop="538" r_length="26" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="23034" i_stop="24376" i_length="1343">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="24377" g_stop="24457" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="539" r_stop="619" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="24458" i_stop="24545" i_length="88">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.907" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="24546" g_stop="24656" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="620" r_stop="730" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="24657" i_stop="24773" i_length="117">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="24774" g_stop="24856" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="731" r_stop="813" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="24857" i_stop="26043" i_length="1187">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="26044" g_stop="26163" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="814" r_stop="933" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="26164" i_stop="26255" i_length="92">
            <donor d_prob="0.960" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="26256" g_stop="26378" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="934" r_stop="1056" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="26379" i_stop="26633" i_length="255">
            <donor d_prob="0.918" d_score="1.00"/>
            <acceptor a_prob="0.942" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="26634" g_stop="26700" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="1057" r_stop="1123" r_length="67" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="26701" i_stop="26790" i_length="90">
            <donor d_prob="0.942" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="26791" g_stop="26870" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="1124" r_stop="1203" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="26871" i_stop="27408" i_length="538">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="27409" g_stop="27896" g_length="488"/>
          <reference_exon_boundary r_type="cDNA" r_start="1204" r_stop="1691" r_length="488" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0020J02.1" gen_strand="+" ref_id="SGN-U584477" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1691</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0020J02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U584477" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18670" e_stop="18789"/>
          <exon e_start="21634" e_stop="21806"/>
          <exon e_start="22534" e_stop="22703"/>
          <exon e_start="22872" e_stop="22920"/>
          <exon e_start="23008" e_stop="23033"/>
          <exon e_start="24377" e_stop="24457"/>
          <exon e_start="24546" e_stop="24656"/>
          <exon e_start="24774" e_stop="24856"/>
          <exon e_start="26044" e_stop="26163"/>
          <exon e_start="26256" e_stop="26378"/>
          <exon e_start="26634" e_stop="26700"/>
          <exon e_start="26791" e_stop="26870"/>
          <exon e_start="27409" e_stop="27896"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTCCAGCTCTCTCTTTTTTGTTCTCTGAACTCTCAGAGACACTGTGTCGGCGACCAGCAAGCACAGCGGCGCAGCAAAACTCTCGTCTGTCGACTCTCTATCTCTCAGCGTGACGGATTGTAAGCTACCTCATCTCCCATTAGTAATATTTAGTATGTATCTCTCGGTCTCTTTTCTCTGCCTACAGCAAAACAGCAAGCTAAATTTTAAGATATTTCTGTTGTTTTAAGTATTGAATTCTTGTGTTGAATGTTTTTGGGCTGGCTGCCTTGTTCCTGGTAATGTTATTTTATATTTGGATTGTGTTTCTGGCTTGCTGTTGCTGAAGTGTTTTGCCAAGTTAGAATTTTTTTTTTTGTGACTGCTAAGCAACTTGCTAATTGGCATGGCTGCTGCGGTGCTGGCAACTGGTTAGACTATTATGTGCAAGTGAGCCGTGCTGTACTGCTCCGAGCCTGCGAGTGGGCTGCCTGCTATGTTAGTTCACCTTGAAATAGACCAAATTTAGTTCATAGTTTAGCCTATTAAGTTAGTTCATTGTTATAAGAGCAGTGCTAACTTATTACTTAAGTATTGAATGTTGATACTTGACAACAGCGAAGAATGCTAGGCTGTTAGGCTGAGAAGAGTGTTATAAAAAAAGAGACATTACGAGACTAAGAGCCTTTATTTATTTGAATTTTCATGTTAACTTTATAAGTTAAATATTTTGATAATTTTGTTCTCATTTGCACCAAAAAACCATTTTAAAAACACTGAACCGAAGTTTGGTTCGGTATTTGGTACACACTATTTCAAATCTGAATACCGAAGAACCGAACCGGATTTGATACAAGAAAGCAAATAAAGAAAAAAAAAGTAAGACAGTTGAATCTTCTAGCCTTAAACTAAAGATTGAAACGGACTGTACTGTTCCTTTTTATTTTTAAGAGTACTTATTAATTATCTTATTATTGCTAAAAAATGGTTGGGGGCCTAAGGCAAGTTCTCTATTTTCCAATGCATACAGCTGCCCCTGATTGTAAATGTGCAATACATGCAGCTGTTACCAGGCTTTACTAGTCTATGTCTACATAGAGATGTCAATGTGAGTTTGGAACCATCAAAATGAAAAGGACTAAATCCTAGAGTTAGAATCTTATCTTCTTTACTGTTTTGATTCATTAGTCTTTATGCTTTGTGTTTTTCTTTATCAGATCTAAATGAGAAAAAGAAATGGTTAGCTTAATTACAATGTGAACTAGCTCTGGAGATCAGTAGCTAATAGCTAAGTGTGATGTATGTTCATTAGATGCCATATAGGATCAGTAGTCTATGAACTATGAAGAGGTCAGTAAGATGAGTGATCAGTCTTGTTAAGCTTAAGTCTATAATTTATTTGAACTCTATTATGTTTCTGTTAGCGGCAGCCCCTTCATGTGGATATATTGTGTTTGTATGTCGTGATTTCCTCTAGTCTAGATAGTAAAGGTTTAATAAATTTCTATCAACAAGTATTTGACTAATCAGGGATTTTTGAATTAAGGTTCTTGTTGTATTCTAGAACTTTTAGTTATCTTGCCACCTTAAAATTAGCACAAAATGGCTAAAGAATCTTGTGTTGGCCTTCTTGTTCTCATTCATAAACTTGAGATGAAGTCTTGTTGTATATGTTTTCAGCTATAAGGTTGCTGTCCAGGAGGAATATCTTTAGCTCACTTGTAAATAAAGGGAAACCCCTTCCAGTATTAGCAACATCATCTTGTGAGGGGTCTAATTGTATTATGTTCAAGACTATTTTTGTTGAGTCTCTTATTCATGAAGGGTCTAAAACTTGTGATTTTTAACTGAAATAAGTACTAAGAAATGATTTAAGGATAATCAAAAACTTGTAGATGGCCTGTTTCAGCTATGTGTTTGCAAGTCTAGTTTCAAACTTGTTTAGCTTTCCTTCATGTTTATGCTTGAGTAGTTGACTAGTTGATCTGTGACATAAGAGGCTTATCATATCCCGTTATGTGGTTGGGTAACATCTGTCTCTTTGTTTATTTAAGATCCCCTTTAACTTGAGAGGAGTTTTATTTTTGTTCAAGAAAAGATCAAGTTTGTTCAAAAATAATGCTCTCTGGTTGTGTTTGTATTTTTAAAAATGAGAAGATTTGGCATTTAAGAGAATTGTCACTGCTTACTTGAGATTAATGGTACCCCTTCCTAGTCTTGAATGGCTTAAGTATGTTGAAAACTCACTACATGAGCCCCTTTTAAAGTTCTGAACATAGCACCCTTCTTTGTTTTTTAAGTTGTGAGTAAGAAGTACTCCCTCTGTCACCAATTACTTGTCCACTTTTGAATTTGCACACCTATTAAGAAAACAATAATTGACATAGTGAGTTTACCATATTACCCCTATTAATTATGAAGTGGATGAATTGAAACTTAAGACATTCAAGAAGTTTTTACCTTTTACAAAGTAATTAATTGAGGGTATAATAGGTAAAAAAAAATTGGCCTTTCTTGATTTGTCAAAATGGACTAGTAATTAGGGATAGAGTGAGTAGCAGTTTCCTATGCAATTATTTTTTTGCGATTATTTTCTTCATTTTACTGTTCATAAACCCATGATTGTTCAGGGACTTTTTTGCTCTGTTCGATGTGCTTACCACTTCCTAAATCCTGAATAATTAACCTTAGGATCATTAGTTAAGACTAAATCCATTAAGACTTTAGTGGTAATAATTTTCCAGATTGGTTTGGCCCTCCCTGTTTGTGCAGCAGCTGTCAGAGATCCATATCCCATTCTACGAGAGTTTTAGCTTGCCAAATCTCGACAGATTTATTCTTAACACTGTCCACTAATCTCTTTGACTTAGCTACTTGTTCACTTAGGAATCAAGAGGTATAAATTCTCAAGTGACTGTTTTACATTTATGCTAAATCTGTTTTGGGACCATGTTTTCAATATGACTTTTACTGCACTTGTTAAGTAGAGAGATGGGGAAGAATAAGAGCTCAAGGAAAGGGAAGAAGGCATGGAGAGCCAACATAAGTACGGAGGATATTGAAGATTTCTTTGACAACTCCACTAAAGATGCTCTTTCAGGCGGTTCTCTTGCTCAAGTTCCCAGTGACTCTCTCTTTTATGTCGACAAATCCAGAGGTATTCTATTTTTCAGCATTTTTTTCCCGGTTGAAAATTTCCAGAAGTATCTTTTGTTCAAGTAAATAGCAAGGTAAAAAAAAGAACAAGCCGATTTTGATATCAGGCTGGTGTTCACGTATATGTTCTAGCAGCTGATATAGTCTTTAGATGGATGGTATGTATGTGATTTACTGTTCCAACAGATGTATTGAACTAACGTTGGTTGGATAACTGGTTTACTCCACATTTGAAAATGGTATTTTCTTTTAACAGTAGTTTTTTGGTACACGGGAAATAACTGAGTGCTCTGATAATCTTCTCCAGAATTTTGTTTTGGTAGAATCAGTCAAGAGTATTGTGTACTAAGACAAGTAGACCAAATAATTCGGTATCTCATAGAGTTGTAATTATGGAAAAAATTCAATCTTGAGAGCAGATTGAACTTTCATGTCTGTTTTAGACTTGCAGTAATTGTTAGGGTGTTGCTTTTCAGTCAATGGTTCGTGTTCCCATCCAATTGTTGGCTGTAATATGAAGCCGGATGAATTTTGGAGATAGTAACTGACATTTTTGGACTAGAAGAGGGCAGTTTAGAATCACCTTAAGTACTATGTCTCTGGACTATGTAGCAGTTGATGTTCATCATGGGTGCATCTTCCTTTTCCCTTTACTGCAGTTCTGTCGTTTTTTGTTGGTGAATCCTTCTTCAGTGATCAAATGACAAGTTTTTATGTCTACAATCCAGATCTTTCTGTCAAACGGAAAATTGAAAAACACCGGGAGAAAGTACTTCGATATGATAGTATACTACAAAGCAATGCCTTTGTTGAACCTGTACCTTCTTCAACTGGGAAGAAATCCAAGAAGAAAAGTAAACTTCAGATAGCCAAGGATACTGCTCAACAGGGTCAAAAGGTTGTTCACTATTTCATTTTAAATGTTCAACTCTCCAATTGCAAGATGTTATGGCTGATGCTTCCTTGGCATAATGTGCTTCTCTCAATAGGAGAAAAATCTTTTCTTTTGAGTGCAAATGCCTAATGGATCCTCATTGTTTATTTCTTGTTAACTTTGTGTGATTAGGATTCGTCTGGTGGAGACTCTGGCATGGTTGACATTTGGAATGATAAAGGTGTCCTTGTGATTAGAGCCTTTTTGTTCTTCGTCACTTTTGTAGTAAAATGACTTTTCTAATACAGCCTTCGTTGCATTGTTGCAGATGAACTGGTCATCAAAACCAAAAAGGTACACTTTTTTCTCCTACCTGTATTTGAAAATTTTTATTTCTTTTCTCCTCTCCTTATCTTTTTTGTGGCCACTTGTCAGGAACTTTCTTTTCAATTTTGGTGTCCTTTTACATGAAAAACATATTTTAAATCATCTGGATGTAGTCCTTCTAAGTTGTACTGCAATACCTGCTATAGGTTTTCTTAATGCAACCTGCCTTTCTTTATGAGCACTACTATTATTGCCTTATAGTGATTACTTCTTAGTCCACTTAAAAAATAAGTCGTCTTAAGTCAATTGAATCTCTTATTTTTCAAGAAAACATCACATCTAAAAAGCATCTTTGCGATGAACCTTTTCCTTGCACATCCTCTGCATTGCTTATCCTCTCAGAGGATAGATGAGAGTAATAAAGGAAAAAAGACGCACGAGATTGGATATAAAAGATCCTTTATCGTGGAAGGTAATGGACCTAAATAAAGCAAAATGGATGTGGTGAACCATTATAGCTGACCCTAACTATGTCTGTGATTGATACATAGTTGATTGATTGATTCATTTAGTTTTCCATTCACTCGACAAACTTTCACCACTTCATTTGACGAATTAGAATATGCACAGATACAATGATCTGTAACTGATACAAGCTTTCATTGAATAAGATAACATGCATCCAAAAAGAGATTCTTTTCCATTTTGATCATTCCTCAGTTTGGCAGATTGAGATCCTTCCTTTTAGCATTATTGATGCTCTAGGCTGTCTAAAGATCTTGATCAAAATATGTGATGCATGTTTAGATAGTAATTGCATTTCAGGGTTTGGTTTTCTGTACTTTCCTGCTGTTGCGGAGTGAAGTCTTTTCATAATTTTCCCTTTTCAGTAGCTGGGGTAGATTGGATGGTGACACAAGCTTATTTGGTTGCGTTACGATGATGTTATAAAGTCAGTATTAGAACAACTAAAATGATCAAAATAACTGTCATGTATTTTGATCATTTTCTATAATTAAACAGAACACGTATTTAAATGTACAAATATTATTCATGCATTTTTAATACTTGTATTACTCTAATCCCTAAGATACAATCCTTACATTATAGTCCTTTCAGAACTTGTCTCTAAAGACCCCTTGGTGTATATTTTTTGTACCTCCCTGTATTCTTCTTCTTCTTAGTTCCATTTTTTGTTATCTTAACTGTGTATGTTATTTATTTATTATCCTAAAGCTCGAGCATTTGAATTGTGAACGTATGACTTCCCTAGAACAATAACAATTTTGCATCAGTTTACTTTTCGAAAAGGGAAGAGAGAAATCTGCATTAGTATATGTAATCAATTTTATATGCATTGCCTGTGACAGAAGCCCAAGACTTCTGTTATACCTGCTGTGGAAGTTGAGCCTCCAGGATGCTCATTCAATCCTCCATCCGAAAGTCATCAGGTAAAAATTTTTCTGTATGTCACATTTTGCTATTATCGAGCTCCTAGTCCACGCAATTAATAATTCGCTCTGTGTCTTCTCAATTCAGGATGCATTAGCTTGTGCTGTTGCAGATGAAATGCAGAAAATTTATAGAAATGAATTGGGTCCGGAGCCTATTCCATTGGTTGTTCCTGGAGAGGTAGTCAATGAAGAAGATGTAAGTTTAAGCTGCTACTTTCTTGTTAGTACTTTTGACCATGGCTGTTGCAGATGCATCATGGGCTATGTTTTCTTATACTGGGTAAAGTATGCACTGAAGATTCATTTGCCTCAGATGTATTTCCTTGAAGCGGACAGTGGGAGTGACACGGAGAATGAAAATCTAGTGGAAGACGGAAAAACAGATTTGGATAAAAGGTAAGCTTCTATATTGCTCGTCTGTAGTGATAGTGTTAGGGGTTGAAACATGTTCTATTCCTTGCTTGCTTAGTATTAGGGAGTACTTAAAATTATACTTAAAATTTACTCACCTGTGTCTATTCATATTTGTATAGTGAATTGACACTTCTTTGACGATCTTTAGGCTTTAGGCTTCAGAGAAATTAATTATGTGACAGTTCGATGTGTTAAATCTATATGATAAATTTTGCTGCAGTAAACTCAATAACATTTCAATCTCTGGACACTGGTTATACCCAATTAGCTTTAAGTCCTAAATTTTTTTTTGCAACTTTACAAGGCTAACATGAGTTGCCTTGTCCTCGTTTTTGTTCGTGGCTCACAATTCCTTATCATTCATGATCACTAGAAATACAATCTTATTTTATGTGGCTTTGCATGTTTAATAGTTGACATAGTCCTAAGCTGATGGATGTTTATGAGGTCAAAGGCAATATATGTACTGCTACGACTGATGGTCTAAGACATCGTGCTTCCTTCATCCTTATTTATTTGAATCCAGTTTTGCCCTTTTCTGTTTGTTTACTTTTTGCTGCTGGTGGGGGAAGAAGCTTTTATTTCCAGCATTTGTAGTAGTTCTTATTTTTGTCCACCAAGGCTAGGACAGATGGGAAGAATAACCTAGTGTTTTTTGTCTCTACTGAGTTTTGAACCTGACACCTTAGGGTTCTCAACCACTTATTGACTGTAGGCCACACCTTGGGTGCAACGAGTATCCTTTATATTTGGTTAAAGATGCTGAATGAGTACATTGTATATCACTGATATTTGGTTGCTTGGATATGTTCAGACCTCAGTTTAAGTCACCTACATCTGAAATCAGATTTTTAAATGTAAAGGGGTTTGATCCTTAATCTAGCTGAGTTAGATTGTGAGCTAAGTCCCCAGTAAGTGTGATATCCGACGTTATATCTGTTTGCTTTGGTGGTCATGATCCAAATGTCCTAATGATGGTCAGTTGTAGAGTGAACCAGCGTTCAAGATTTTCTTTTTTTGTAAGTCAGTTATGTGTTCTGAATGTTTGCAGTGTGCTAACTTCAGCTACGTTGGCAATCCATGTTACATTGAGTGCATTTTTGCTAGTCGTCAGATCTTTAATTTACTACTATATGAAATTATACATCATCAATTTTAACTTCATTCAGGCCGCAAAAGCCCAAAATGCTGACTCAAGTTGAGAAGAATCGACGGGCTAGACGCAAAGAACAGTTGAAAGCAGAAGCTGAAGCAACAAAAGCAGCACAACTCTCCAAAGAGATTGATAGGTTTGCTGATATTTCGAATATCAGGCTCATCATATTCCAGTTAAATAGAATTTGCCTTTTGTATAGATTATGATATGTTCTTGTGCCTGCAGCTTACCGGATATTATTCAAGAAATAGAGAGAGAGGAAGGAGAAAAACAGAAACGACATCTACGTCGTGTCACTGCTATAAAAGAAAAACTAAAATCTTGTCCACCACGCTTGGGAAAGCGCAAGTATGTACTGTTTCATTTTGAAGTAAAAAATTTCAACAATTGATTTGCTGAGAAAAAGTGTTTTCATAGAACATCAGATTTTAAAGGGATTTTTATGGTTATAACTCTTTTAAAAATGTTTCAACTGGGAGCTTGGGGTTTCAAAGAATGATGATTGCATGAGCTGAGCAATGAGACTCATTTTCTTGTGGTTTTGGTTTTTTCCTGCTATAACTTCAGTGTTGACAAAAAGATAATTGACCTATGTGATTTCAGATTCGTGCCTGCTCCTGCTCAGGTTTTACTGTCTGAAGAGATTACTGGTTCCCTGCGTAAATTAAAGGTTGCATTCCTGATTTCAATTTTCTCCAAATTGGCTGTCTGTATTTTCAAATTTTTTCTCTTATGTTATTTGTCTTCCTGTTTCAAACAGGGATGTTGCACCCTTGCAAGAGATCGATTTAAAAGCCTGGAGAAAAGGGGACTAGTTGTTCCTTCAAAAAAGAGTAGCAGGTTAGTAAAGATTGCTTCTTGTTTGAAATTAAGCCACACTTTCTGGTTTTGGCTTGCTTATTATTTGAAACTAAAAGTATTGCATGCTGTCTTGAAGTGTGTGTGAACCATGTGACACTGAGACAATTGCGGAGTAATCTCTTTTTCTTTAAAGTTTTTGACAGTGAGCTTTGTGCACGTTCCTAATGGCATCATAGTTGATCATAAATTTTGACAATACACCTTGCGGCTAACAAGATGTGAGGAAAATCACCAAAAATTGTTACCAATCGTTTGGGATCAAAAACTAGTATTTTGATAGTGAGCGTCATGTTCCTGATTCGCTATAATTGGAAATTCTGTCATTTCAATGTAACATTAAAGCTTGTGTTTGTGATAACAAATGCTTAAACTTCCCCTGCTTTTGGTTTCAACTTTCAATTAACGGAACTCATCTTTTCTCTGCATGTATCGAGCCATTATATACACTGTTTCAAAAGAAACATTCAGAGTATCAAAACATCTCTTGCTAATTGTTTCTGGTATGGGATGTGTGCAGGAAATAGAGTGAATTGCAAGTAACACAGATAAATGTTTTCATCACCGCACTATGAGACCATCATCCCGATCACCTGGATGAGAGACACTGTAGACAGCAAGGTGTTGGTTTATGTCTGCAAATTTGGAGTGGTAGAGCTGGCTGCTCTTACTGTTAGCAAAATGGAGATGTAGATCTGTTTATCTTACTGATGCATATGGTTCATTACACAATATTTTATAGTCATGGTCAAGTTACTTTGGGAGCAAAAGTGATAATTAATTACTGATGTATCTGGAGGCAGAAGATTGGTGTGATTTCTCTTGATGAACCAGAAATGATTCCCAGAGTCAGCCTTTTTTAAATTTTAAAATGGGAACTCTCATAATCAATATGTACCCCAAAGTTTTTAATTACTCTAATTAGGTCAACTTTTTATTTGATCACATTAGATCAACTATATATCACAAATTTTGATTTTCAAGACTTGAAAGACAACATTTTCTACT</genome_strand>
        <mrna_strand>GCTCCAGCTCTCTCTTTTTTGTTCTCTGAACTCTCAGAGACACTGTGTCGGCGACCAGCAAGCACAGCGGCGCAGCAAAACTCTCGTCTGTCGACTCTCTATCTCTCAGCGTGACGGATT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAGAGATGGGGAAGAATAAGAGCTCAAGGAAAGGGAAGAAGGCATGGAGAGCCAACATAAGTACGGAGGATATTGAAGATTTCTTTGACAACTCCACTAAAGATGCTCTTTCAGGCGGTTCTCTTGCTCAAGTTCCCAGTGACTCTCTCTTTTATGTCGACAAATCCAGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTTTCTGTCAAACGGAAAATTGAAAAACACCGGGAGAAAGTACTTCGATATGATAGTATACTACAAAGCAATGCCTTTGTTGAACCTGTACCTTCTTCAACTGGGAAGAAATCCAAGAAGAAAAGTAAACTTCAGATAGCCAAGGATACTGCTCAACAGGGTCAAAAG........................................................................................................................................................................GATTCGTCTGGTGGAGACTCTGGCATGGTTGACATTTGGAATGATAAAG.......................................................................................ATGAACTGGTCATCAAAACCAAAAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCCCAAGACTTCTGTTATACCTGCTGTGGAAGTTGAGCCTCCAGGATGCTCATTCAATCCTCCATCCGAAAGTCATCAG........................................................................................GATGCATTAGCTTGTGCTGTTGCAGATGAAATGCAGAAAATTTATAGAAATGAATTGGGTCCGGAGCCTATTCCATTGGTTGTTCCTGGAGAGGTAGTCAATGAAGAAGAT.....................................................................................................................ATGTATTTCCTTGAAGCGGACAGTGGGAGTGACACGGAGAATGAAAATCTAGTGGAAGACGGAAAAACAGATTTGGATAAAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGCAAAAGCCCAAAATGCTGACTCAAGTTGAGAAGAATCGACGGGCTAGACGCAAAGAACAGTTGAAAGCAGAAGCTGAAGCAACAAAAGCAGCACAACTCTCCAAAGAGATTGATAG............................................................................................CTTACCGGATATTATTCAAGAAATAGAGAGAGAGGAAGGAGAAAAACAGAAACGACATCTACGTCGTGTCACTGCTATAAAAGAAAAACTAAAATCTTGTCCACCACGCTTGGGAAAGCGCAA...............................................................................................................................................................................................................................................................ATTCGTGCCTGCTCCTGCTCAGGTTTTACTGTCTGAAGAGATTACTGGTTCCCTGCGTAAATTAAAG..........................................................................................GGATGTTGCACCCTTGCAAGAGATCGATTTAAAAGCCTGGAGAAAAGGGGACTAGTTGTTCCTTCAAAAAAGAGTAGCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATAGAGTGAATTGCAAGTAACACAGATAAATGTTTTCATCACCGCACTATGAGACCATCATCCCGATCACCTGGATGAGAGACACTGTAGACAGCAAGGTGTTGGTTTATGTCTGCAAATTTGGAGTGGTAGAGCTGGCTGCTCTTACTGTTAGCAAAATGGAGATGTAGATCTGTTTATCTTACTGATGCATATGGTTCATTACACAATATTTTATAGTCATGGTCAAGTTACTTTGGGAGCAAAAGTGATAATTAATTACTGATGTATCTGGAGGCAGAAGATTGGTGTGATTTCTCTTGATGAACCAGAAATGATTCCCAGAGTCAGCCTTTTTTAAATTTTAAAATGGGAACTCTCATAATCAATATGTACCCCAAAGTTTTTAATTACTCTAATTAGGTCAACTTTTTATTTGATCACATTAGATCAACTATATATCACAAATTTTGATTTTCAAGACTTGAAAGACAACATTTTCTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U564787" ref_strand="+" ref_description="SGN-U564787 Tomato 200607#2 [9 ESTs aligned] (*GB) gi|15235269|ref|NP_193738.1| (e_value=6e-158) expressed protein [Arabidopsis thaliana]; (*ATH) AT4G20050.2 (e_value=4e-160) |; ">
      <seq>gggcaaacagcatgggagaaaaaacatgggctttgtccttgttttttatctttgcttgtctatccaatgtttatggaaatgttcattcatatgatcatcaattgaggaaattacaagcttttacagctgaaattgctagtcgcgattcgatttctccttttccttctccttctcctactagattttctccatcgccatcatcaccatcagtaataactgtaagtctttttaacttttttcctcaatttatgttaaacgtatcgtaaattacctattttatgtattatattaggttacaccaagtccaaaagtatatcatgtaacatcatatggtgctgatccaactggaaaattagatagcacacaagctattctacaagcaatttctgatgcacttgaaggtccatctaatggtttcttaatgcaaggaatttcaaatcttggtggtgctcaaattaatcttgaaggtggaaattatttaattagccaaccattacaattccctattgttagccgtggcaatctaatgattcatggaggtaccctaaaagcttcagatgattttccaagagatggatatttactcgatttatcgacatcttcaagcaacggtcctgagtttttattcgaattcataactttaagagatttattacttgatgcaaatttcagaggaggcggtatacaagtgataaattcactaagaacaagcattgacaattgttacatcacacatttcacaacaaatggtatcatagccaaaggtggacatgaaacatacattagaaattcatttcttggacaacatatcactgctggtggtgataaaggggagaggaatttctccggcaccgcgataaatctagcgggaaatgataattctgttactgatgtagtgatattctcagctgaaattggtgtaattgtatcaggtcaagcaaatttgttatcaggtatacattgttacaataaggctacaggatttggtgggactggaatttacttaaaactccctggtttaacacaaacaaggattgtggattcttatttggattacactggaatagtggcagaggatcctgttcaactcacaatctcaaacacattttttctaggagatggatttgttaagttgaagtcaataaatggtgttgtgaatggagttaacatagtggataatatgttttctggatcaaataaagggatcgatattgttcaattggatcaaagtaatggaccatttaagacaattgaacaagttgtggtggatagaaataatgttaaggggatgaatctcaagggcacaattggaagtggagttgttgaagggaatggtacatcatggactatggattttaatccaattcttgtatttcctaaccttattaaacatgttcagtacacgtttttccctagcgggaacgtgttcgttaatcatgctttgagaaatatatcgaataataaggttatcgttgaatctaacgttcaagttccagcaagggttctcgtgacggtggatcaagggaaatgagcttatttgagctaacaaaaattagggatttatctagctagttattatgttacaaaggtgattaggtctctttgaatcattcttgaaaaaagaaatgtttatgtttaagaaaaattcaaaaagtataatccagcaatacaaggaatgctttttgattggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0020J02.1" temp_strand="-" temp_description="C02SLm0020J02.1  AC226519.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0020J02 sequenced_by:kribb upload_account_name:korea">
        <position start="44852" stop="42309"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44553" g_stop="44025" g_length="529"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="529" r_length="529" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="44024" i_stop="43771" i_length="254">
            <donor d_prob="0.969" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="43770" g_stop="42609" g_length="1162"/>
          <reference_exon_boundary r_type="cDNA" r_start="530" r_stop="1691" r_length="1162" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0020J02.1" gen_strand="-" ref_id="SGN-U564787" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>1691</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0020J02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U564787" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44553" e_stop="44025"/>
          <exon e_start="43770" e_stop="42609"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGCAAACAGCATGGGAGAAAAAACATGGGCTTTGTCCTTGTTTTTTATCTTTGCTTGTCTATCCAATGTTTATGGAAATGTTCATTCATATGATCATCAATTGAGGAAATTACAAGCTTTTACAGCTGAAATTGCTAGTCGCGATTCGATTTCTCCTTTTCCTTCTCCTTCTCCTACTAGATTTTCTCCATCGCCATCATCACCATCAGTAATAACTGTAAGTCTTTTTAACTTTTTTCCTCAATTTATGTTAAACGTATCGTAAATTACCTATTTTATGTATTATATTAGGTTACACCAAGTCCAAAAGTATATCATGTAACATCATATGGTGCTGATCCAACTGGAAAATTAGATAGCACACAAGCTATTCTACAAGCAATTTCTGATGCACTTGAAGGTCCATCTAATGGTTTCTTAATGCAAGGAATTTCAAATCTTGGTGGTGCTCAAATTAATCTTGAAGGTGGAAATTATTTAATTAGCCAACCATTACAATTCCCTATTGTTAGCCGTGGCAATCTAATGGTACGTTCTGTTATAACACGTTAAATTATACTGACTCATCAATAAATAATAGAATGGTTACATGTCTTCCTTTGATTCTTTTCTATTCTTTTTTTTTGGGGTCAAATCTCTTGACTTGACCTTTTTGAAATATAGAAAAGTAAAATTAATTTTTTTTTCTCATGTAATCTCAAGACTTTTTAACTTACATTTCTAAAATTTCTACCTAGTTAGTTATTTTAATTACGATATTACCCCTCCATTTTATGAAACAGATTCATGGAGGTACCCTAAAAGCTTCAGATGATTTTCCAAGAGATGGATATTTACTCGATTTATCGACATCTTCAAGCAACGGTCCTGAGTTTTTATTCGAATTCATAACTTTAAGAGATTTATTACTTGATGCAAATTTCAGAGGAGGCGGTATACAAGTGATAAATTCACTAAGAACAAGCATTGACAATTGTTACATCACACATTTCACAACAAATGGTATCATAGCCAAAGGTGGACATGAAACATACATTAGAAATTCATTTCTTGGACAACATATCACTGCTGGTGGTGATAAAGGGGAGAGGAATTTCTCCGGCACCGCGATAAATCTAGCGGGAAATGATAATTCTGTTACTGATGTAGTGATATTCTCAGCTGAAATTGGTGTAATTGTATCAGGTCAAGCAAATTTGTTATCAGGTATACATTGTTACAATAAGGCTACAGGATTTGGTGGGACTGGAATTTACTTAAAACTCCCTGGTTTAACACAAACAAGGATTGTGGATTCTTATTTGGATTACACTGGAATTGTGGCAGAGGATCCTGTTCAACTCACAATTTCAAACACATTTTTTCTTGGAGATGGATTTGTTAAGTTGAAGTCAATAAATGGTGTTGTGAATGGAGTTAACATAGTGGATAATATGTTTTCTGGATCAAATAAAGGGATTGATATTGTTCAATTGGATCAAAGTAATGGACCATTTAAGACAATTGAACAAGTTGTGGTGGATAGAAATAATGTTAAGGGGATGAATCTCAAGGGCACAATTGGAAGTGGAGTTGTTGAAGGGAATGGTACATCATGGACTATGGATTTTAATCCAATTCTTGTATTTCCTAACCTTATTAAACATGTTCAGTACACGTTTTTCCCTAGCGGGAACGTGTTCGTTAATCATGCTTTGAGAAATATATCGAATAATAAGGTTATCGTTGAATCTAACGTTCAAGTTCCAGCAAGGGTTCTCGTGACGGTGGATCAAGGGAAATGAGCTTATTTGAGCTAACAAAAATTAGGGATTTATCTAGCTAGTTATTATGTTACAAAGGTGATTAGGTCTCTTTGAATCATTCTTGAAAAAAGAAATGTTTATGTTTAAGAAAAATTCAAAAAGTATAATCCAGCAATACAAGGAATGCTTTTTGATTGGC</genome_strand>
        <mrna_strand>GGGCAAACAGCATGGGAGAAAAAACATGGGCTTTGTCCTTGTTTTTTATCTTTGCTTGTCTATCCAATGTTTATGGAAATGTTCATTCATATGATCATCAATTGAGGAAATTACAAGCTTTTACAGCTGAAATTGCTAGTCGCGATTCGATTTCTCCTTTTCCTTCTCCTTCTCCTACTAGATTTTCTCCATCGCCATCATCACCATCAGTAATAACTGTAAGTCTTTTTAACTTTTTTCCTCAATTTATGTTAAACGTATCGTAAATTACCTATTTTATGTATTATATTAGGTTACACCAAGTCCAAAAGTATATCATGTAACATCATATGGTGCTGATCCAACTGGAAAATTAGATAGCACACAAGCTATTCTACAAGCAATTTCTGATGCACTTGAAGGTCCATCTAATGGTTTCTTAATGCAAGGAATTTCAAATCTTGGTGGTGCTCAAATTAATCTTGAAGGTGGAAATTATTTAATTAGCCAACCATTACAATTCCCTATTGTTAGCCGTGGCAATCTAATG..............................................................................................................................................................................................................................................................ATTCATGGAGGTACCCTAAAAGCTTCAGATGATTTTCCAAGAGATGGATATTTACTCGATTTATCGACATCTTCAAGCAACGGTCCTGAGTTTTTATTCGAATTCATAACTTTAAGAGATTTATTACTTGATGCAAATTTCAGAGGAGGCGGTATACAAGTGATAAATTCACTAAGAACAAGCATTGACAATTGTTACATCACACATTTCACAACAAATGGTATCATAGCCAAAGGTGGACATGAAACATACATTAGAAATTCATTTCTTGGACAACATATCACTGCTGGTGGTGATAAAGGGGAGAGGAATTTCTCCGGCACCGCGATAAATCTAGCGGGAAATGATAATTCTGTTACTGATGTAGTGATATTCTCAGCTGAAATTGGTGTAATTGTATCAGGTCAAGCAAATTTGTTATCAGGTATACATTGTTACAATAAGGCTACAGGATTTGGTGGGACTGGAATTTACTTAAAACTCCCTGGTTTAACACAAACAAGGATTGTGGATTCTTATTTGGATTACACTGGAATAGTGGCAGAGGATCCTGTTCAACTCACAATCTCAAACACATTTTTTCTAGGAGATGGATTTGTTAAGTTGAAGTCAATAAATGGTGTTGTGAATGGAGTTAACATAGTGGATAATATGTTTTCTGGATCAAATAAAGGGATCGATATTGTTCAATTGGATCAAAGTAATGGACCATTTAAGACAATTGAACAAGTTGTGGTGGATAGAAATAATGTTAAGGGGATGAATCTCAAGGGCACAATTGGAAGTGGAGTTGTTGAAGGGAATGGTACATCATGGACTATGGATTTTAATCCAATTCTTGTATTTCCTAACCTTATTAAACATGTTCAGTACACGTTTTTCCCTAGCGGGAACGTGTTCGTTAATCATGCTTTGAGAAATATATCGAATAATAAGGTTATCGTTGAATCTAACGTTCAAGTTCCAGCAAGGGTTCTCGTGACGGTGGATCAAGGGAAATGAGCTTATTTGAGCTAACAAAAATTAGGGATTTATCTAGCTAGTTATTATGTTACAAAGGTGATTAGGTCTCTTTGAATCATTCTTGAAAAAAGAAATGTTTATGTTTAAGAAAAATTCAAAAAGTATAATCCAGCAATACAAGGAATGCTTTTTGATTGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U564783" ref_strand="+" ref_description="SGN-U564783 Tomato 200607#2 [9 ESTs aligned] (*GB) gi|15235269|ref|NP_193738.1| (e_value=2e-62) expressed protein [Arabidopsis thaliana]; (*ATH) AT4G20050.2 (e_value=1e-64) |; ">
      <seq>gatgggagaaaaaacatgggctttgtccttgttttttatctttgcttgtctatccaatgtttatggaaatgttcattcatatgatcatcaattgaggaaattacaagcttttacagctgaaattgctagtcgcgattcgatttctccttttccttctccttctcctactagattttctccatcgccatcatcaccatcagtaataactgttacaccaagtccaaaagtatatcatgtaacatcatatggtgctgatccaactggaaaattagatagcacacaagctattctacaagcaatttctgatgcacttgaaggtccatctaatggtttcttaatgcaaggaatttcaaatcttggtggtgctcaaattaatcttgaaggtggaaattatttaattagccaaccattacaattccctattgttagccgtggcaatctaatgattcatggaggtaccctaaaagcttcagatgattttccaagagatggatatttactcgatttatcgacatcttcaagcaacggtcctgagtttttattcgaattcataactttaagagatttattacttgatgcaaatttcagaggaggcggtatacaagtgataaattcactaaaaacaagcattgacaattgttacatcacacatttcacaacaaatggtatcatagccaaaggtggacatgaaacatacattaaaaattcatttcttggacacatatcactgctggtggtgataaaggggagaggaatttctccggcaccgcgataatctagcgggaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0020J02.1" temp_strand="-" temp_description="C02SLm0020J02.1  AC226519.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0020J02 sequenced_by:kribb upload_account_name:korea">
        <position start="44842" stop="43128"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44543" g_stop="44336" g_length="208"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="208" r_length="208" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="44335" i_stop="44262" i_length="74">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="44261" g_stop="44025" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="209" r_stop="445" r_length="237" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="44024" i_stop="43771" i_length="254">
            <donor d_prob="0.969" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="43770" g_stop="43428" g_length="343"/>
          <reference_exon_boundary r_type="cDNA" r_start="446" r_stop="786" r_length="341" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0020J02.1" gen_strand="-" ref_id="SGN-U564783" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>788</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0020J02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U564783" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44543" e_stop="44336"/>
          <exon e_start="44261" e_stop="44025"/>
          <exon e_start="43770" e_stop="43428"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATGGGAGAAAAAACATGGGCTTTGTCCTTGTTTTTTATCTTTGCTTGTCTATCCAATGTTTATGGAAATGTTCATTCATATGATCATCAATTGAGGAAATTACAAGCTTTTACAGCTGAAATTGCTAGTCGCGATTCGATTTCTCCTTTTCCTTCTCCTTCTCCTACTAGATTTTCTCCATCGCCATCATCACCATCAGTAATAACTGTAAGTCTTTTTAACTTTTTTCCTCAATTTATGTTAAACGTATCGTAAATTACCTATTTTATGTATTATATTAGGTTACACCAAGTCCAAAAGTATATCATGTAACATCATATGGTGCTGATCCAACTGGAAAATTAGATAGCACACAAGCTATTCTACAAGCAATTTCTGATGCACTTGAAGGTCCATCTAATGGTTTCTTAATGCAAGGAATTTCAAATCTTGGTGGTGCTCAAATTAATCTTGAAGGTGGAAATTATTTAATTAGCCAACCATTACAATTCCCTATTGTTAGCCGTGGCAATCTAATGGTACGTTCTGTTATAACACGTTAAATTATACTGACTCATCAATAAATAATAGAATGGTTACATGTCTTCCTTTGATTCTTTTCTATTCTTTTTTTTTGGGGTCAAATCTCTTGACTTGACCTTTTTGAAATATAGAAAAGTAAAATTAATTTTTTTTTCTCATGTAATCTCAAGACTTTTTAACTTACATTTCTAAAATTTCTACCTAGTTAGTTATTTTAATTACGATATTACCCCTCCATTTTATGAAACAGATTCATGGAGGTACCCTAAAAGCTTCAGATGATTTTCCAAGAGATGGATATTTACTCGATTTATCGACATCTTCAAGCAACGGTCCTGAGTTTTTATTCGAATTCATAACTTTAAGAGATTTATTACTTGATGCAAATTTCAGAGGAGGCGGTATACAAGTGATAAATTCACTAAGAACAAGCATTGACAATTGTTACATCACACATTTCACAACAAATGGTATCATAGCCAAAGGTGGACATGAAACATACATTAGAAATTCATTTCTTGGACAACATATCACTGCTGGTGGTGATAAAGGGGAGAGGAATTTCTCCGGCACCGCGATAAATCTAGCGGGAA</genome_strand>
        <mrna_strand>GATGGGAGAAAAAACATGGGCTTTGTCCTTGTTTTTTATCTTTGCTTGTCTATCCAATGTTTATGGAAATGTTCATTCATATGATCATCAATTGAGGAAATTACAAGCTTTTACAGCTGAAATTGCTAGTCGCGATTCGATTTCTCCTTTTCCTTCTCCTTCTCCTACTAGATTTTCTCCATCGCCATCATCACCATCAGTAATAACT..........................................................................GTTACACCAAGTCCAAAAGTATATCATGTAACATCATATGGTGCTGATCCAACTGGAAAATTAGATAGCACACAAGCTATTCTACAAGCAATTTCTGATGCACTTGAAGGTCCATCTAATGGTTTCTTAATGCAAGGAATTTCAAATCTTGGTGGTGCTCAAATTAATCTTGAAGGTGGAAATTATTTAATTAGCCAACCATTACAATTCCCTATTGTTAGCCGTGGCAATCTAATG..............................................................................................................................................................................................................................................................ATTCATGGAGGTACCCTAAAAGCTTCAGATGATTTTCCAAGAGATGGATATTTACTCGATTTATCGACATCTTCAAGCAACGGTCCTGAGTTTTTATTCGAATTCATAACTTTAAGAGATTTATTACTTGATGCAAATTTCAGAGGAGGCGGTATACAAGTGATAAATTCACTAAAAACAAGCATTGACAATTGTTACATCACACATTTCACAACAAATGGTATCATAGCCAAAGGTGGACATGAAACATACATTAAAAATTCATTTCTTGGAC-ACATATCACTGCTGGTGGTGATAAAGGGGAGAGGAATTTCTCCGGCACCGCGAT-AATCTAGCGGGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U570799" ref_strand="+" ref_description="SGN-U570799 Tomato 200607#2 [7 ESTs aligned] (*GB) gi|157338459|emb|CAO39503.1| (e_value=4e-57) unnamed; (*ATH) AT1G53530.1 (e_value=1e-57)  Symbol: None | signal peptidase I family protein, contains similarity to SP:P28627 Mitochondrial inner membrane protease subunit 1 (EC 3.4.99.-) {Saccharomyces cerevisiae}; contains Pfam profile PF00461: Signal peptidase I | chr1:19981821-19983751 F... ; (*SWP) sp|Q9CQU8|IMP1L_MOUSE (e_value=2e-26) Mitochondrial inner membrane protease subunit 1 OS=Mus musculus GN=Immp1l; ">
      <seq>acctatttcattcatggttttgtaaaggtgggagaagataatgcgattgtttcagtacttgagtcaatggaaatccaaagccaatgacggaattcaacaatcacttcttatcgccaaattcctctgcttattacatgtcacaagcaactacgttttctctccagtaatggtgtacggtccgagcatgttgccgaccctgaatcttaccggtgatgttttgctggttgaacatttgtcgccgttgttcgataagttgggacctggagatgtaatccttgttcggtcacctgataaccctaggaagactgtaactaaacgaattattggcatggagggtgatactgtcacttttctagctgacccttcaaaaagtgaccggtatattagcttaaaggttccaaaggggcatgtttggattcaaggagataacatctatgcttcaaaggattcacgacagctcgggccaatcccttgtggccttatctcgggaaaagtgttatacagagtatggcctccagagtgttttggttcattatgaccacaaaaacaatgtattgtactgaagatatacaattaaaatgagaaatgtgattctttactagtccttattacctaattctaaataatgattgttaatttattttggtaaggatgctttaccatgaatttgatttttttgtacatttgcaatatttaaggtatgaaatcaagaaaaatgttgagagaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0020J02.1" temp_strand="-" temp_description="C02SLm0020J02.1  AC226519.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0020J02 sequenced_by:kribb upload_account_name:korea">
        <position start="56699" stop="52781"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="56399" g_stop="56231" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="169" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="56230" i_stop="56151" i_length="80">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="56150" g_stop="55926" g_length="225"/>
          <reference_exon_boundary r_type="cDNA" r_start="170" r_stop="394" r_length="225" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="55925" i_stop="53879" i_length="2047">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="53878" g_stop="53768" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="395" r_stop="505" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="53767" i_stop="53307" i_length="461">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="53306" g_stop="53080" g_length="227"/>
          <reference_exon_boundary r_type="cDNA" r_start="506" r_stop="732" r_length="227" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0020J02.1" gen_strand="-" ref_id="SGN-U570799" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>732</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0020J02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U570799" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="56399" e_stop="56231"/>
          <exon e_start="56150" e_stop="55926"/>
          <exon e_start="53878" e_stop="53768"/>
          <exon e_start="53306" e_stop="53080"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCTATTTCATTCATGGTTTTGTAAAGGTGGGAGAAGATAATGCGATTGTTTCAGTACTTGAGTCAATGGAAATCCAAAGCCAATGACGGAATTCAACAATCACTTCTTATCGCCAAATTCCTCTGCTTATTACATGTCACAAGCAACTACGTTTTCTCTCCAGTAATGGTACGTATTTTCTCCATTTTATCTGCAATTTTACCGCTAAGAAATTAGGTTATGCGGATAAAATTTTTCTACTGTTTTAGGTGTACGGTCCGAGCATGTTGCCGACCCTGAATCTTACCGGTGATGTTTTGCTGGTTGAACATTTGTCGCCGTTGTTCGATAAGTTGGGACCTGGAGATGTAATCCTTGTTCGGTCACCTGATAACCCTAGGAAGACTGTAACTAAACGAATTATTGGCATGGAGGGTGATACTGTCACTTTTCTAGCTGACCCTTCAAAAAGTGACCGGTATATTAGCTTAAAGGTGTGTTCTTTTCTTTAGTGTAATTTTGCCCTTTTTCCATTCTTGGATTGATTGTTGATTGTTGTTAGGTGAGGAGCCATAGCCTCAAACAATGTGTTCCTTTTGTTGGCTAAGTATATGACCATATGTGGGCTAGCATGAGTTATTGTTGTAATGAAGAAGTCTAGGAAGGCTTAAAGAAGAATGTGCTAGGATTAACCCCTTTATAGATAGGGTGAGCAAGGAGGTTCTAAACAGAAATGTCCTAGGATTTAGCCCCTTTAGAGATAGTGGCAAGTCAGGAGTTTTAGACAAAAATGTCCTAAGATTAGCCCCTTTAGAGATAGGGGTGAGTTACTAGCTTGTAAACGAAAATATGCTAGGATTAGCCTTTTTAGAGATAGGGGCGAGTCAGGAGCTTTTAAACAAAAATGTCCTAGCATTGAGCCCCTTTAGAAATAGTGGTGAGTCAGGAGCTTTTAGACAAAAATTGTCCTAGGATTAGCCCCTTGAGAGATAGGGGCGAGTTAGGAGCTTTTAAACAAAAATGTGCTAGGATTAACCCCTTTAGAGAAAGGGGCGAGTCAGGAGCTTTTAAATAAAAATGTGCTAGGATAGCCCTCTAGAGATAAGGGTGAGCCAGGTGCTTACTGTGGGTATTTATGACTCTGGTGGCAGCACGTGACAGTCGAATAACATGATTCTCAAGGAGTTACATGACTGCCAAGCCAATTCTTTTAAGACTTGTGGCTGCTTTAATTTCTATTGTTGATGATTTTCTATTAACTATAGTCCAGTTTTGTCATTGGTCTGTAGATTCACTGTTTTTATCTTCCTAGTGCTCTCTGTCTTTTCTCTTTCCTTATAGATGCAAACCTCTTGTTCTTCATTAGATTTCACCTTAGTTAGAGATAACAGACAGTTGCTAGTTTCTGCAGTGAATGCTTTAAATTCTTGGAGTCCCTTTACTTCATTAAGCAAATGAGAGAAAAAGTTGTATCTTTCAATCTTTGGACTTCCTAGTTTTCCACCCTTTCATAGAAACCACACATGGGATAAAACAAAAGGAGGTCACATTAGATGGTTTGACCTATATAGACCAATAAATTTGTTTGTCAGTGGTTCGGACTCTAGGATGGTTTAGTGTTAAAAGATAACATTGGTAGATTTAAAATCCAATGGAGTGAAGTTGTTTCAAAAGACCAACTATTTGTCCGAAGCTAGTTAAGAAGATACTTTAATGGAAACACTGAATCCTAACTAGTTTAGCATTGAGGTATAGTTGTTGTAAAGAGAACTGCATATGACCAAAAACATCCACTAATTGCTTGGGAAGTACTCTTAATTCTTGCTGAGTAATGGACCTTACTGTCTTCTTTAATATTTGTAATTGCCAGGACCTAGGATATTGTGGTGTCAATTCTCTTTAGAAACCTGAAATTTGGGCTCTGAACACAATGTTAGGCATGCCACCAAGCTTCCTTATGCTTACCCACTAAGGTTTTCTCTCTCATTGTTGTTTCCAGGCTCACCTTCAGTTTCTTATATCCAAGGTCTTATTATTTTGGCAGAGTATGTGAATCTATTTCGTTTGCCACATTTCATCTCAAAGTAAACGGGAAAATGAGAATCCAATTTTCTTTTTAATACCTGAGTAAACCCGAAGTGTGAGTAGTGCACAGTTCGAAACTCTGGACAATGGGCCTTGCCCTCTAATCTCTATATATAACTGAGGATTTTATTTGAAGCACTAAAGATGCTCTATTTTTTACTTTATTTAGATGTTGTATGCTTTTTAGTAGTTTCATTCTGATTTTCTGGAATACCACCTGAAATAGCAATTTGAAACTGGCTTGGAATTCTTTCTTGTGTTAATAAATATATTTCGTTAGAAGAGAAAAAGTTTATCCATCTTTGAGGTGACTATCCACTGCTTACGATGTGACTGAGGCGATACATGTTTTCTCATTCCATAATATACTGTAGTTTTATTTTTGATGCTTTATATTCTTATAGTTTCTTTGGTTTCTCCCATCCTTTTCAATTCTTTTCATGTGGGGTTATCTAGGTTCCAAAGGGGCATGTTTGGATTCAAGGAGATAACATCTATGCTTCAAAGGATTCACGACAGCTCGGGCCAATCCCTTGTGGCCTTATCTCGGGAAAAGTGTTATACAGAGTAAGTTTCATTACCTTTACTGTCTTGAGTCATTCGAACCATCTTAATGAATCCTCAACTTCTTAAATGATTTTACCTCTGGGATGGATTAGCATCTAGGAATCGTGCTTTCCCTTAAAAGTTCAGTATACGACTAGAAAACTCTAGCCCATGGCTTAGGCAAGTTTACGCAGAACTCTGCTAACTCCAAGTCTAATATGCAATTGTAGTTCATCTGCCTTTACATCCTGAACAAGATAAGAGTCCATAACCATCATCTGCTTTGAAGTCTTTACATTTGATATTTGATGGTTGCTTACCTTTACTTAGAATGCTTCTTTATGCAAATTAATCGACTTACATCAACAATATTAATATCGATATTATGGTCATAGATACACAAATATTGGGGGTGGAGTAGCCATTTGAGAATCTCGTATATAGAAACTAATTAGCACCCTCTTGTGTTTTTGCATATGTAGGTATGGCCTCCAGAGTGTTTTGGTTCATTATGACCACAAAAACAATGTATTGTACTGAAGATATACAATTAAAATGAGAAATGTGATTCTTTACTAGTCCTTATTACCTAATTCTAAATAATGATTGTTAATTTATTTTGGTAAGGATGCTTTACCATGAATTTGATTTTTTTGTACATTTGCAATATTTAAGGTATGAAATCAAGAAAAATGTTGAGAGACAATAT</genome_strand>
        <mrna_strand>ACCTATTTCATTCATGGTTTTGTAAAGGTGGGAGAAGATAATGCGATTGTTTCAGTACTTGAGTCAATGGAAATCCAAAGCCAATGACGGAATTCAACAATCACTTCTTATCGCCAAATTCCTCTGCTTATTACATGTCACAAGCAACTACGTTTTCTCTCCAGTAATG................................................................................GTGTACGGTCCGAGCATGTTGCCGACCCTGAATCTTACCGGTGATGTTTTGCTGGTTGAACATTTGTCGCCGTTGTTCGATAAGTTGGGACCTGGAGATGTAATCCTTGTTCGGTCACCTGATAACCCTAGGAAGACTGTAACTAAACGAATTATTGGCATGGAGGGTGATACTGTCACTTTTCTAGCTGACCCTTCAAAAAGTGACCGGTATATTAGCTTAAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCAAAGGGGCATGTTTGGATTCAAGGAGATAACATCTATGCTTCAAAGGATTCACGACAGCTCGGGCCAATCCCTTGTGGCCTTATCTCGGGAAAAGTGTTATACAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATGGCCTCCAGAGTGTTTTGGTTCATTATGACCACAAAAACAATGTATTGTACTGAAGATATACAATTAAAATGAGAAATGTGATTCTTTACTAGTCCTTATTACCTAATTCTAAATAATGATTGTTAATTTATTTTGGTAAGGATGCTTTACCATGAATTTGATTTTTTTGTACATTTGCAATATTTAAGGTATGAAATCAAGAAAAATGTTGAGAGAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U562908" ref_strand="+" ref_description="SGN-U562908 Tomato 200607#2 [5 ESTs aligned] (*GB) gi|157338589|emb|CAO41940.1| (e_value=5e-75) unnamed; (*ATH) AT4G20070.1 (e_value=9e-71)  Symbol: None | peptidase M20/M25/M40 family protein, contains similarity to hydantoin utilization protein C (Pseudomonas sp.) SWISS-PROT:Q01264; contains Pfam profile PF01546: Peptidase family M20/M25/M40 | chr4:10861465-10864705 FORWARD | Aliases: ... ; (*SWP) sp|O49434|AAH_ARATH (e_value=8e-70) Allantoate deiminase, chloroplastic OS=Arabidopsis thaliana GN=AAH; ">
      <seq>gagttcattttatcttctctcattccaattttggagtgccgtggcgttgttcgcttgcttttataagcctttgcagcaagcagccatggcggcgcctcctccttctattacattctcatttccagttccccatgcaatcatgatgaaatctatgtcaatcttatccttcattcttcttctttcacctttgttcgccatggctaacacatcatttggtgctgaaaatacagaaggcataaagtatgatcttttccctgaaatcctcaaggaggaagctgtaggaagacttaatgagcttggaaaggtaagtgatgcaaatggctacctagagaggaccttccagagccctgcatcggtcagagcaggaaatcttcttcgtgcatggatggaagatgcaggcttgaaaacgtgggtggaccaaatgggcaatgtccatggtcgggctgaaggaattaatccaagtgaaaaggctttgttaattggctctcatttggatacagttattgatgctggattctttgatggttcattgggcataatttgtgcaatatctgcattgaaggcactgaattcctctggaaggttgggtaaactccggcggccagttgaggtaatcgcatttagtgatgaggagggagtaaggtttcagtcaaccttcttgggtagtgcagctattgctggcatattaccagtttcagcgttgcaagtacatgataagaatggtgtgacagtgcaaggtgctctgagagcaagttctatagagactacagaagaaaacctttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0020J02.1" temp_strand="+" temp_description="C02SLm0020J02.1  AC226519.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0020J02 sequenced_by:kribb upload_account_name:korea">
        <position start="60523" stop="64776"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60822" g_stop="61036" g_length="215"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="215" r_length="215" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="61037" i_stop="61843" i_length="807">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="61844" g_stop="61932" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="216" r_stop="304" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="61933" i_stop="62114" i_length="182">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62115" g_stop="62218" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="305" r_stop="408" r_length="104" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62219" i_stop="62289" i_length="71">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62290" g_stop="62374" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="409" r_stop="493" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="62375" i_stop="62489" i_length="115">
            <donor d_prob="0.801" d_score="1.00"/>
            <acceptor a_prob="0.891" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="62490" g_stop="62606" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="494" r_stop="610" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="62607" i_stop="64224" i_length="1618">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="64225" g_stop="64334" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="611" r_stop="720" r_length="110" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="64335" i_stop="64413" i_length="79">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.959" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="64414" g_stop="64476" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="721" r_stop="783" r_length="63" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0020J02.1" gen_strand="+" ref_id="SGN-U562908" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>783</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0020J02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U562908" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60822" e_stop="61036"/>
          <exon e_start="61844" e_stop="61932"/>
          <exon e_start="62115" e_stop="62218"/>
          <exon e_start="62290" e_stop="62374"/>
          <exon e_start="62490" e_stop="62606"/>
          <exon e_start="64225" e_stop="64334"/>
          <exon e_start="64414" e_stop="64476"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGTTCATTTTATCTTCTCTCATTCCAATTTTGGAGTGCCGTGGCGTTGTTCGCTTGCTTTTATAAGCCTTTGCAGCAAGCAGCCATGGCGGCGCCTCCTCCTTCTATTACATTCTCATTTCCAGTTCCCCATGCAATCATGATGAAATCTATGTCAATCTTATCCTTCATTCTTCTTCTTTCACCTTTGTTCGCCATGGCTAACACATCATTTGGTAATTATTTGTGTTCTTCACATGTAAAGTTTTGATTTTTTTTACACCCTTTTGGGTAATGAATGAACCCTTTTAATGTTTCTGTTAGGATCTTTGGAAATGTGATGATTTTGCAAGTATTTGTACTTTTTTTTTTCTTCCAGGTGGAAAGCTTGCGTGTAAAAGTTGAAGTATATTCTGTCTGACTTTACTAGGTCTTTGAAGTTTATGTGTTGATTTGATTCTATTTAGAAAAAAAGATGGTTTCTTTATTGTGAAAATGGAATTATATTGTGACCTGTTTTTCTTAGGTAGCTGGTTCTTTGTGTTCTTGAAATCTATGTTTTGTTCGGAATCTTTAAAAATGTCTACGCGTATTGGATAGTCTAAAAGTAGTGTATTTTTTAAGGGTTCGATACGGATGGGGAAAGAGTTTTGGAGAGTCCGAGCTACATAGGTTGAAGTTATACTAGCTGTTTCATAAGAATTAATTAGTGATTGTCAAGATGGAAAAATTAGCTCCTTTAAGTTCTCACTAGTTTGTATATTCATGCCATTTTCAATTTGTTTCGTCTTGAACTGTAACATTATATGATGTACACAGCTATGATTCTGTTTCTTTCATTAGTTTGATTGTTTTCCAATGTGAAGTTCTATAAACAATGATTCTTTAAAAAACCCAAATGTTGTGTTCTTTATCGCAATGAACTGTTCCATTCATCTCACTAAACAAGATTCATCCGTCCCCCCATCCCCCTTGATTCAGTTGCTCTTTTTATGCTAAATACCTAAAATCTGTAATAATGTGGTGCTCTTTGTGATGATTAGGTGCTGAAAATACAGAAGGCATAAAGTATGATCTTTTCCCTGAAATCCTCAAGGAGGAAGCTGTAGGAAGACTTAATGAGCTTGGAAAGGTATCAAAGCAAGACAAACTACTTTAATCTAATCATTATTAGTGGAAGTCAAATTTCCCGGGAAGCATTTTTTTCTTGTATCTTAACTGAGTTTTTATCTTTCTTAGTGTACAATTCATTATGCATCAATGAATAATGAATTTGTTGTGTTGATTTAACAAATTTGTTGTGTTGTGTGACAGGTAAGTGATGCAAATGGCTACCTAGAGAGGACCTTCCAGAGCCCTGCATCGGTCAGAGCAGGAAATCTTCTTCGTGCATGGATGGAAGATGCAGGCTTGAAAACGTATGTTTTCAACTTATCTTACAGTATTTTTAATGCTTCAGAAACTTAATTGAGAGCACTCCTGGTTCCAGGTGGGTGGACCAAATGGGCAATGTCCATGGTCGGGCTGAAGGAATTAATCCAAGTGAAAAGGCTTTGTTAATTGGCTCTCATTTGGTGAAGCATTGATTACTTACATCTTCTTCTGATAGTAGATTTGCTTAACTTCACAGCATTACTAGTTCAAGATGCTGCAGAAGGACCTGCCATTAAATATTTTGTATTTCAACAGGATACAGTTATTGATGCTGGATTCTTTGATGGTTCATTGGGCATAATTTGTGCAATATCTGCATTGAAGGCACTGAATTCCTCTGGAAGGTTGGGTAAACTCCGGCGGCCAGTTGAGGTGAGACACATAAAACATGTTAGCCTGGAATGTCAATCGTCTTTCATGTTTTCTGTCCTGTTATTCTTTGTTGCAACCAGAAGTTCATTTTTCTTTTTCAATCACACTAGTAATGCATTTTTAAGGAGTGGGGGCACTGTACTTTATTTGTGTCTCCTAAAGACAAAATCCGTTAGCGGAACTGCTCAATCTGAAGTCCAAAAAGTAATTGCTCTTTAACTCTAACTCCAGAAAGTTCAGGCACTAGTCATGAGCTTTCCCATTTAAATTTTGGCTATGTTCTGGTGTCGACTGCTAAGTCTCAGACTGTTCCAATTTTGTTTTGGGTTTACACTTAAAACCAATCCTTGAAGAGGCTTATGTTTGTGGTTGCAAGCTCCATTAAAAATGTGTTTTGCATATGAGGCGATGAAAGTGGATGGTAAATGGGGTTAATACTTGGTACGTCTCTGACTTGACCAACATAGTCTAGTATGCTGATATCTGAATAATGAGTTAGATAAATCCTTACTACCTGGGGTTTCTATCATTATGCTATCTCTCTTTTCATGGTATATATTTGTTCACAATTATGAACATGCAAACAGTTAGGTCCACATCTGCCTCATGTTGCTAGATAACTAAATTGTTGACCGATGAGAGGAACTTGGGAGCTAAAGTACAAGAGAACTATGTTGCTTGGACTCTTAAGTAAACCGCTAGGTTCATGTCATCCTTCAAAAACAGGACATTTTTTAAGGATCTGACATGAGTGCAGCATTATTGGAGAGTCCGAGCAACATGCAAGAGAGTGCACAAATAATCCTATGGTATTACCAAAAGAAATTATCATTATGATCAAATAGAATCCTACGGTAATACACTTAAAAAATATTATCACAACATTCGAGTTGATTCTTGCTGACATAGTTGTAACCTGCGCACGGACAATATCAAATCCATCTATTAGAGTTTTGGAGTATGTATTAATGTTCCCTGGTTTTACTTCTCCCTCTTCTCGCATCTTTCATCTCTTTTTCTTATCTCCTTGTCTTTCAGCTTTGAGATGTATGAACTCACTAATGAGCTTTGTAATTTCACCCTCTTGCCCATCTAACCCTAGCTTCAAATGGTATGTCATGTCCTCTTTGAAATGCTATAACCTTGAACATGCAAATTTGAGTTTACGTTCCTTATTTTCATGTACTTGACATAACTAGACCTTCTAGGGGAGAATTGAGTTATATCTAACAAATAATCCTGTCTGTTTAGAATCTAAAATAGTAGACCTTCTAGGGGAGACTATCACACTTTTGCACCAGTCTGTCTATGATCTAAATATTGGCATAAGCACTTAAGTAATTTTATATCACCAGTCATCATTTGTGGTAGCAGGATTATCAGGAGTCAGAAAGAATATACTTAATGTGCAATGACAAAATAAAGTTGTTTAAGGAGAAGTTGTAGCAAGTTTTACAGCACAAGTAGTAGTCCAGTGGCTCAATGTGTAATTGCTGTCAACTCTCCTTTGTATTCCTTCCATCTTTTTTATTTTGAGTTGATATCATATCATAAAATATTTTGTTTCTCCTGCTTTTTAGTATTAAAAATTGCAAATTTCTTATGTACTATTTTGCAGGTAATCGCATTTAGTGATGAGGAGGGAGTAAGGTTTCAGTCAACCTTCTTGGGTAGTGCAGCTATTGCTGGCATATTACCAGTTTCAGCGTTGCAAGTACATGATAAGAAGTTTGTATGGCTAACCCAAAAGCTTGTCTTTGTTCGTATAGCTACTGTGTCACAGTATACTAATGTGCAAGTGTTTCAGTGGTGTGACAGTGCAAGGTGCTCTGAGAGCAAGTTCTATAGAGACTACAGAAGAAAACCTTTT</genome_strand>
        <mrna_strand>GAGTTCATTTTATCTTCTCTCATTCCAATTTTGGAGTGCCGTGGCGTTGTTCGCTTGCTTTTATAAGCCTTTGCAGCAAGCAGCCATGGCGGCGCCTCCTCCTTCTATTACATTCTCATTTCCAGTTCCCCATGCAATCATGATGAAATCTATGTCAATCTTATCCTTCATTCTTCTTCTTTCACCTTTGTTCGCCATGGCTAACACATCATTTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCTGAAAATACAGAAGGCATAAAGTATGATCTTTTCCCTGAAATCCTCAAGGAGGAAGCTGTAGGAAGACTTAATGAGCTTGGAAAG......................................................................................................................................................................................GTAAGTGATGCAAATGGCTACCTAGAGAGGACCTTCCAGAGCCCTGCATCGGTCAGAGCAGGAAATCTTCTTCGTGCATGGATGGAAGATGCAGGCTTGAAAAC.......................................................................GTGGGTGGACCAAATGGGCAATGTCCATGGTCGGGCTGAAGGAATTAATCCAAGTGAAAAGGCTTTGTTAATTGGCTCTCATTTG...................................................................................................................GATACAGTTATTGATGCTGGATTCTTTGATGGTTCATTGGGCATAATTTGTGCAATATCTGCATTGAAGGCACTGAATTCCTCTGGAAGGTTGGGTAAACTCCGGCGGCCAGTTGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAATCGCATTTAGTGATGAGGAGGGAGTAAGGTTTCAGTCAACCTTCTTGGGTAGTGCAGCTATTGCTGGCATATTACCAGTTTCAGCGTTGCAAGTACATGATAAGAA...............................................................................TGGTGTGACAGTGCAAGGTGCTCTGAGAGCAAGTTCTATAGAGACTACAGAAGAAAACCTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U562909" ref_strand="+" ref_description="SGN-U562909 Tomato 200607#2 [7 ESTs aligned] (*GB) gi|15235272|ref|NP_193740.1| (e_value=8e-170) hydantoin utilization protein-related [Arabidopsis thaliana]; (*ATH) AT4G20070.1 (e_value=7e-172)  Symbol: None | peptidase M20/M25/M40 family protein, contains similarity to hydantoin utilization protein C (Pseudomonas sp.) SWISS-PROT:Q01264; contains Pfam profile PF01546: Peptidase family M20/M25/M40 | chr4:10861465-10864705 FORWARD | Aliases: ... ; (*SWP) sp|O49434|AAH_ARATH (e_value=6e-171) Allantoate deiminase, chloroplastic OS=Arabidopsis thaliana GN=AAH; ">
      <seq>gagtgccgtggcgttgttcgcttgcttttataagcctttgcagcaagcagccatggcggcgcctcctccttctattacattctcatttccagttccccatgcaatcatgatgaaatctatgtcaatcttatccttcattcttcttctttcacctttgttcgccatggctaacacatcatttggtgctgaaaatacagaaggcataaagtatgatcttttccctgaaatcctcaaggaggaagctgtaggaagacttaatgagcttggaaaggtaagtgatgcaaatggctacctagagaggaccttccagagccctgcatcggtcagagcaggaaatcttcttcgtgcatggatggaagatgcaggcttgaaaacgatacagttattgatgctggattctttgatggttcattgggcataatttgtgcaatatctgcattgaaggcactgaattcctctggaaggttgggtaaactccggcggccagttgaggtaatcgcatttagtgatgaggagggagtaaggtttcagtcaaccttcttgggtagtgcagctattgctggcatattaccagtttcagcgttgcaagtacatgataagaatggtgtgacagtgcaaggtgctctgagagcaagttctatagagactacagaagaaaaccttttgcagctcaaatatgaaccagaatctgtttggggctatgttgaggttcacattgaacagggacctgtactggagaatgtcggtctccctcttggttcagtaaaaggcattgcagggcagacaagattgaaggtgacagtgaaaggcacacaaggacatgcagggacagtacccatgaatatgcgacaggatcctatggttgcagctgctgaactaattgtatttctggaaagtctttgtaaacaacctgactattatctgtcatatgatggtcaatgcacatcttcaacagtggaatctcttgcaggatctctggtctgtactgttggagagatatcaacttggccaagtgcaagtaatgtcattccaggccaggtcacattcaccgtagatgtacgtgcgatggatgacttaggacgagaagctataatttatgaattctctaatagactctaccatatgtgtgataggcgttctgtcttctgtaacgttgagagaaagcatgatgcaaatgctgtggtttgcgatcctagcctgagtagacagctaaaatctgcatcttatactgctttgaaaagaataactgatgaggatccaggtgatgttcctgtactgatgagtggagcaggacatgatgcaatggccatgtctcatctaaccaaggtgggaatgctatttgtgcgttgtcgcggaggcatcagccattctccagcagaacatgtattggatgatgatgtttgggcagctggaatggctgtccttgcatttttggagacactcttgtaattgttggcattttgcaatgcaaactagtaggctagtttgctattcataatcccatttttgtatatatatgtatccattcaatttctatagttgtagtaatgagaatgtatatttgcaataaaacaagttgacctgtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0020J02.1" temp_strand="+" temp_description="C02SLm0020J02.1  AC226519.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0020J02 sequenced_by:kribb upload_account_name:korea">
        <position start="60555" stop="66727"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60855" g_stop="61036" g_length="182"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="182" r_length="182" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="61037" i_stop="61843" i_length="807">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="61844" g_stop="61932" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="183" r_stop="271" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="61933" i_stop="62114" i_length="182">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62115" g_stop="62218" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="272" r_stop="375" r_length="104" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62219" i_stop="62489" i_length="271">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.891" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62490" g_stop="62606" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="376" r_stop="492" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="62607" i_stop="64224" i_length="1618">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="64225" g_stop="64334" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="493" r_stop="602" r_length="110" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="64335" i_stop="64413" i_length="79">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.959" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="64414" g_stop="64519" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="603" r_stop="708" r_length="106" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="64520" i_stop="64625" i_length="106">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="64626" g_stop="64712" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="709" r_stop="795" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="64713" i_stop="65261" i_length="549">
            <donor d_prob="0.924" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="65262" g_stop="65504" g_length="243"/>
          <reference_exon_boundary r_type="cDNA" r_start="796" r_stop="1038" r_length="243" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="65505" i_stop="65617" i_length="113">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="65618" g_stop="65743" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="1039" r_stop="1164" r_length="126" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="65744" i_stop="65816" i_length="73">
            <donor d_prob="0.894" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="65817" g_stop="65978" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="1165" r_stop="1326" r_length="162" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="65979" i_stop="66167" i_length="189">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="66168" g_stop="66427" g_length="260"/>
          <reference_exon_boundary r_type="cDNA" r_start="1327" r_stop="1586" r_length="260" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0020J02.1" gen_strand="+" ref_id="SGN-U562909" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1586</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0020J02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U562909" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60855" e_stop="61036"/>
          <exon e_start="61844" e_stop="61932"/>
          <exon e_start="62115" e_stop="62218"/>
          <exon e_start="62490" e_stop="62606"/>
          <exon e_start="64225" e_stop="64334"/>
          <exon e_start="64414" e_stop="64519"/>
          <exon e_start="64626" e_stop="64712"/>
          <exon e_start="65262" e_stop="65504"/>
          <exon e_start="65618" e_stop="65743"/>
          <exon e_start="65817" e_stop="65978"/>
          <exon e_start="66168" e_stop="66427"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGTGCCGTGGCGTTGTTCGCTTGCTTTTATAAGCCTTTGCAGCAAGCAGCCATGGCGGCGCCTCCTCCTTCTATTACATTCTCATTTCCAGTTCCCCATGCAATCATGATGAAATCTATGTCAATCTTATCCTTCATTCTTCTTCTTTCACCTTTGTTCGCCATGGCTAACACATCATTTGGTAATTATTTGTGTTCTTCACATGTAAAGTTTTGATTTTTTTTACACCCTTTTGGGTAATGAATGAACCCTTTTAATGTTTCTGTTAGGATCTTTGGAAATGTGATGATTTTGCAAGTATTTGTACTTTTTTTTTTCTTCCAGGTGGAAAGCTTGCGTGTAAAAGTTGAAGTATATTCTGTCTGACTTTACTAGGTCTTTGAAGTTTATGTGTTGATTTGATTCTATTTAGAAAAAAAGATGGTTTCTTTATTGTGAAAATGGAATTATATTGTGACCTGTTTTTCTTAGGTAGCTGGTTCTTTGTGTTCTTGAAATCTATGTTTTGTTCGGAATCTTTAAAAATGTCTACGCGTATTGGATAGTCTAAAAGTAGTGTATTTTTTAAGGGTTCGATACGGATGGGGAAAGAGTTTTGGAGAGTCCGAGCTACATAGGTTGAAGTTATACTAGCTGTTTCATAAGAATTAATTAGTGATTGTCAAGATGGAAAAATTAGCTCCTTTAAGTTCTCACTAGTTTGTATATTCATGCCATTTTCAATTTGTTTCGTCTTGAACTGTAACATTATATGATGTACACAGCTATGATTCTGTTTCTTTCATTAGTTTGATTGTTTTCCAATGTGAAGTTCTATAAACAATGATTCTTTAAAAAACCCAAATGTTGTGTTCTTTATCGCAATGAACTGTTCCATTCATCTCACTAAACAAGATTCATCCGTCCCCCCATCCCCCTTGATTCAGTTGCTCTTTTTATGCTAAATACCTAAAATCTGTAATAATGTGGTGCTCTTTGTGATGATTAGGTGCTGAAAATACAGAAGGCATAAAGTATGATCTTTTCCCTGAAATCCTCAAGGAGGAAGCTGTAGGAAGACTTAATGAGCTTGGAAAGGTATCAAAGCAAGACAAACTACTTTAATCTAATCATTATTAGTGGAAGTCAAATTTCCCGGGAAGCATTTTTTTCTTGTATCTTAACTGAGTTTTTATCTTTCTTAGTGTACAATTCATTATGCATCAATGAATAATGAATTTGTTGTGTTGATTTAACAAATTTGTTGTGTTGTGTGACAGGTAAGTGATGCAAATGGCTACCTAGAGAGGACCTTCCAGAGCCCTGCATCGGTCAGAGCAGGAAATCTTCTTCGTGCATGGATGGAAGATGCAGGCTTGAAAACGTATGTTTTCAACTTATCTTACAGTATTTTTAATGCTTCAGAAACTTAATTGAGAGCACTCCTGGTTCCAGGTGGGTGGACCAAATGGGCAATGTCCATGGTCGGGCTGAAGGAATTAATCCAAGTGAAAAGGCTTTGTTAATTGGCTCTCATTTGGTGAAGCATTGATTACTTACATCTTCTTCTGATAGTAGATTTGCTTAACTTCACAGCATTACTAGTTCAAGATGCTGCAGAAGGACCTGCCATTAAATATTTTGTATTTCAACAGGATACAGTTATTGATGCTGGATTCTTTGATGGTTCATTGGGCATAATTTGTGCAATATCTGCATTGAAGGCACTGAATTCCTCTGGAAGGTTGGGTAAACTCCGGCGGCCAGTTGAGGTGAGACACATAAAACATGTTAGCCTGGAATGTCAATCGTCTTTCATGTTTTCTGTCCTGTTATTCTTTGTTGCAACCAGAAGTTCATTTTTCTTTTTCAATCACACTAGTAATGCATTTTTAAGGAGTGGGGGCACTGTACTTTATTTGTGTCTCCTAAAGACAAAATCCGTTAGCGGAACTGCTCAATCTGAAGTCCAAAAAGTAATTGCTCTTTAACTCTAACTCCAGAAAGTTCAGGCACTAGTCATGAGCTTTCCCATTTAAATTTTGGCTATGTTCTGGTGTCGACTGCTAAGTCTCAGACTGTTCCAATTTTGTTTTGGGTTTACACTTAAAACCAATCCTTGAAGAGGCTTATGTTTGTGGTTGCAAGCTCCATTAAAAATGTGTTTTGCATATGAGGCGATGAAAGTGGATGGTAAATGGGGTTAATACTTGGTACGTCTCTGACTTGACCAACATAGTCTAGTATGCTGATATCTGAATAATGAGTTAGATAAATCCTTACTACCTGGGGTTTCTATCATTATGCTATCTCTCTTTTCATGGTATATATTTGTTCACAATTATGAACATGCAAACAGTTAGGTCCACATCTGCCTCATGTTGCTAGATAACTAAATTGTTGACCGATGAGAGGAACTTGGGAGCTAAAGTACAAGAGAACTATGTTGCTTGGACTCTTAAGTAAACCGCTAGGTTCATGTCATCCTTCAAAAACAGGACATTTTTTAAGGATCTGACATGAGTGCAGCATTATTGGAGAGTCCGAGCAACATGCAAGAGAGTGCACAAATAATCCTATGGTATTACCAAAAGAAATTATCATTATGATCAAATAGAATCCTACGGTAATACACTTAAAAAATATTATCACAACATTCGAGTTGATTCTTGCTGACATAGTTGTAACCTGCGCACGGACAATATCAAATCCATCTATTAGAGTTTTGGAGTATGTATTAATGTTCCCTGGTTTTACTTCTCCCTCTTCTCGCATCTTTCATCTCTTTTTCTTATCTCCTTGTCTTTCAGCTTTGAGATGTATGAACTCACTAATGAGCTTTGTAATTTCACCCTCTTGCCCATCTAACCCTAGCTTCAAATGGTATGTCATGTCCTCTTTGAAATGCTATAACCTTGAACATGCAAATTTGAGTTTACGTTCCTTATTTTCATGTACTTGACATAACTAGACCTTCTAGGGGAGAATTGAGTTATATCTAACAAATAATCCTGTCTGTTTAGAATCTAAAATAGTAGACCTTCTAGGGGAGACTATCACACTTTTGCACCAGTCTGTCTATGATCTAAATATTGGCATAAGCACTTAAGTAATTTTATATCACCAGTCATCATTTGTGGTAGCAGGATTATCAGGAGTCAGAAAGAATATACTTAATGTGCAATGACAAAATAAAGTTGTTTAAGGAGAAGTTGTAGCAAGTTTTACAGCACAAGTAGTAGTCCAGTGGCTCAATGTGTAATTGCTGTCAACTCTCCTTTGTATTCCTTCCATCTTTTTTATTTTGAGTTGATATCATATCATAAAATATTTTGTTTCTCCTGCTTTTTAGTATTAAAAATTGCAAATTTCTTATGTACTATTTTGCAGGTAATCGCATTTAGTGATGAGGAGGGAGTAAGGTTTCAGTCAACCTTCTTGGGTAGTGCAGCTATTGCTGGCATATTACCAGTTTCAGCGTTGCAAGTACATGATAAGAAGTTTGTATGGCTAACCCAAAAGCTTGTCTTTGTTCGTATAGCTACTGTGTCACAGTATACTAATGTGCAAGTGTTTCAGTGGTGTGACAGTGCAAGGTGCTCTGAGAGCAAGTTCTATAGAGACTACAGAAGAAAACCTTTTGCAGCTCAAATATGAACCAGAATCTGTTTGGGGCTATGTTGAGGTCAATAATAGTTCTCTATATACCATATCAAAGTCACTAACTACTTCATAAGATCCCAGGTAATGTAGTTGCTGATGATAAATCTTATTATAATGGTCTTTTGCAGGTTCACATTGAACAGGGACCTGTACTGGAGAATGTCGGTCTCCCTCTTGGTTCAGTAAAAGGCATTGCAGGGCAGACAAGATTGAAGGTGTGTATTCTTATCCTACCGCCTCTCGGCTGCTTTATGTGATCGCAGCATCAAAGATAGTCTGAATTTTCTACAGCAGAAGTCGTCTACTTCTATTCTAAGTTTTTTAATGTAACTTAGTAGGAGCACATTTTCAAGTAGTTTTCGTCTTTGTGATGATATGGCGTTACAAAGTAGAGAAGTACTTATATGATGTATGTACCACTTTGCTTGATTGAACTCCAAGTTGGAATCTTGATCCTTATTATGGGAGAATTGGATCTTACTTTGGTGCATTGAAGCTAAATTCTAAAGATTGCAATTAATAAATTCAAGAAACATATTTCAAGCCCTTGGGCAATAAATCAATTGATCAGTAAGAGAGGAATAGTTAAGTCAGAGCTCTAAAGGGTGAGAAAATTATCTCCCTGGGAAATGTGTTGTTGGCACAATCTACAGCTTGGCTACTTCCACTTGTCACGACTAAAATCTCCTTTGGTGTACACTGCCGCTTATAAATTTGGTTTAAGTAATGCTTGCTTGACCAGACTTTTGAATTAAGCATTGCAGGTGACAGTGAAAGGCACACAAGGACATGCAGGGACAGTACCCATGAATATGCGACAGGATCCTATGGTTGCAGCTGCTGAACTAATTGTATTTCTGGAAAGTCTTTGTAAACAACCTGACTATTATCTGTCATATGATGGTCAATGCACATCTTCAACAGTGGAATCTCTTGCAGGATCTCTGGTCTGTACTGTTGGAGAGATATCAACTTGGCCAAGTGCAAGTAATGTCATTCCAGGCCAGGCAAGCTCTCCTTAAACTGCTGACACACAAGTTACATATTGTTGTTTGTTATTCATACAGGGTAAGTACTCCAATTTCTAGAATGTTCATTACTACATGTGCATTTATTGCAGGTCACATTCACCGTAGATGTACGTGCGATGGATGACTTAGGACGAGAAGCTATAATTTATGAATTCTCTAATAGACTCTACCATATGTGTGATAGGCGTTCTGTCTTCTGTAACGTTGAGAGAAAGGTGAGAGATTCTTAGATCATATGTAGCGAATTCTGATGCATGTTCATGACTAACGCTTGTCTTGTTGATTTAGCATGATGCAAATGCTGTGGTTTGCGATCCTAGCCTGAGTAGACAGCTAAAATCTGCATCTTATACTGCTTTGAAAAGAATAACTGATGAGGATCCAGGTGATGTTCCTGTACTGATGAGTGGAGCAGGACATGATGCAATGGCCATGTCTCATCTAACCAAGGTGAGTTATACTCAAACCTTGTATTTTACTACTCCAGACGTGATCTTTTTTCGTTTTCTTATCCAAGCCACCTTGTGCACCTATACTATTACATCCTATATAGGTGTTTCAAAGTTTTAACCTGGTTCATTGACACTTGAATGTAATTTTCCTTCTTATTTTTACTAAAGATTGACTACTTTTCGATAGGTGGGAATGCTATTTGTGCGTTGTCGCGGAGGCATCAGCCATTCTCCAGCAGAACATGTATTGGATGATGATGTTTGGGCAGCTGGAATGGCTGTCCTTGCATTTTTGGAGACACTCTTGTAATTGTTGGCATTTTGCAATGCAAACTAGTAGGCTAGTTTGCTATTCATAATCCCATTTTTGTATATATATGTATCCATTCAATTTCTATAGTTGTAGTAATGAGAATGTATATTTGCAATAAAACAAGTTGACCTGTT</genome_strand>
        <mrna_strand>GAGTGCCGTGGCGTTGTTCGCTTGCTTTTATAAGCCTTTGCAGCAAGCAGCCATGGCGGCGCCTCCTCCTTCTATTACATTCTCATTTCCAGTTCCCCATGCAATCATGATGAAATCTATGTCAATCTTATCCTTCATTCTTCTTCTTTCACCTTTGTTCGCCATGGCTAACACATCATTTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCTGAAAATACAGAAGGCATAAAGTATGATCTTTTCCCTGAAATCCTCAAGGAGGAAGCTGTAGGAAGACTTAATGAGCTTGGAAAG......................................................................................................................................................................................GTAAGTGATGCAAATGGCTACCTAGAGAGGACCTTCCAGAGCCCTGCATCGGTCAGAGCAGGAAATCTTCTTCGTGCATGGATGGAAGATGCAGGCTTGAAAAC...............................................................................................................................................................................................................................................................................GATACAGTTATTGATGCTGGATTCTTTGATGGTTCATTGGGCATAATTTGTGCAATATCTGCATTGAAGGCACTGAATTCCTCTGGAAGGTTGGGTAAACTCCGGCGGCCAGTTGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAATCGCATTTAGTGATGAGGAGGGAGTAAGGTTTCAGTCAACCTTCTTGGGTAGTGCAGCTATTGCTGGCATATTACCAGTTTCAGCGTTGCAAGTACATGATAAGAA...............................................................................TGGTGTGACAGTGCAAGGTGCTCTGAGAGCAAGTTCTATAGAGACTACAGAAGAAAACCTTTTGCAGCTCAAATATGAACCAGAATCTGTTTGGGGCTATGTTGAG..........................................................................................................GTTCACATTGAACAGGGACCTGTACTGGAGAATGTCGGTCTCCCTCTTGGTTCAGTAAAAGGCATTGCAGGGCAGACAAGATTGAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGACAGTGAAAGGCACACAAGGACATGCAGGGACAGTACCCATGAATATGCGACAGGATCCTATGGTTGCAGCTGCTGAACTAATTGTATTTCTGGAAAGTCTTTGTAAACAACCTGACTATTATCTGTCATATGATGGTCAATGCACATCTTCAACAGTGGAATCTCTTGCAGGATCTCTGGTCTGTACTGTTGGAGAGATATCAACTTGGCCAAGTGCAAGTAATGTCATTCCAGGCCAG.................................................................................................................GTCACATTCACCGTAGATGTACGTGCGATGGATGACTTAGGACGAGAAGCTATAATTTATGAATTCTCTAATAGACTCTACCATATGTGTGATAGGCGTTCTGTCTTCTGTAACGTTGAGAGAAAG.........................................................................CATGATGCAAATGCTGTGGTTTGCGATCCTAGCCTGAGTAGACAGCTAAAATCTGCATCTTATACTGCTTTGAAAAGAATAACTGATGAGGATCCAGGTGATGTTCCTGTACTGATGAGTGGAGCAGGACATGATGCAATGGCCATGTCTCATCTAACCAAG.............................................................................................................................................................................................GTGGGAATGCTATTTGTGCGTTGTCGCGGAGGCATCAGCCATTCTCCAGCAGAACATGTATTGGATGATGATGTTTGGGCAGCTGGAATGGCTGTCCTTGCATTTTTGGAGACACTCTTGTAATTGTTGGCATTTTGCAATGCAAACTAGTAGGCTAGTTTGCTATTCATAATCCCATTTTTGTATATATATGTATCCATTCAATTTCTATAGTTGTAGTAATGAGAATGTATATTTGCAATAAAACAAGTTGACCTGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U566752" ref_strand="+" ref_description="SGN-U566752 Tomato 200607#2 [10 ESTs aligned] (*GB) gi|15218209|ref|NP_175641.1| (e_value=0) protein kinase family [Arabidopsis thaliana]; (*ATH) AT1G52310.1 (e_value=0) | Symbol: None | protein kinase family protein / C-type lectin domain-containing protein, contains protein kinase domain, Pfam:PF00069, PF00059 Lectin C-type domain | chr1:19481793-19484279 FORWARD | Aliases: F19K6.8, F19K6_8; (*SWP) sp|Q3EDL4|Y1154_ARATH (e_value=1e-48) Putative serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540; ">
      <seq>gggaagtcattaaaaatggtggggacaaacataaggtgagaaattaactactctgtctgaacaaacactttcttcttcaaagaaaattcaactaaccattggagactccaaatgtgaactctttactcttcttttttttttttttttccatctaaacgaaaaaccctatccacaatgcccaaccccacactcaaaattagtctaggttttgctatacagtgagaacaagtgatgatggctgttaaacttccgttccctttgtttctactttcttgttttctgcttcacctctgtgcttctacttctgtttctaataagacacaagtagtttcctctgctgggaatcaaagtcatgatgatggaagatgtgatcctggttggtttaacggcccaaaagggaaaaagtgcttcaaatattatgctacgtctttgcaatggaatgaatcagagacttactgcaatggttttggaggaaacctggctgccataacatcttcagaagaactgaactttgtccagaagctctgtggcaatgatagtaacggatgctgggttggtggaaggagcatcaatatcacagctgggttgggttggaaatggtctgataatgcttctagctggaatgagagtattgctcctaagacaactttggactcaagttgcaaaaatttctcatgctatggctttaagtcggtggatttgtgtacatcgataatcagtggtgctattatagctgagagatgcaatgtaactcatgcttctatatgcacacttgatgctgggagcaagtgtcgccatatgcggtgccacagggagtatctcattattcttgcagttgttagtgggttgatcctttgcactactttggctattgtgatatggcttcttgtatttaggcgaagtaaaagacgcaaaagatcattgcgtgcttcattagcattagttcccccgtcttggaaaattttcagtcgtgatgaagtaaagtccatgacaaagaatttcagtgaagcaaatcgtctccttggggacgccaaaacaggtggtacctatagtgggcttttacctgatggttcaagggtggctgtgaaaagattgaagaggtgcggtattcagaggaagaaagagttctactctgagattggaagggttgcaagacttcatcattcaaatctggtatctatcaaaggatgttgctatcatcatggtgaccgctatattctgtacgagttcatcatcaatggacccctggataggtggctacaccatattcctagaggaggtaggagtttggactggagcatgagaatgaaggtcgccaccacccttgctcaagggattgcgtttcttcatgacaaaatgaagccacaagttgtgcatagggatatccgtgcaagcaatgtccttcttgacgaagaatttggcgcccatctaatgggagttggtctgtctaagtttgtgccatgggaaatcatgcacgagaggagagtcatggcaggtggtactcatgggtatcttgctccggagtttgtttacagaaatgagcttactacaaagagtgacgtctacagctttggagtcctcttgcttgaaataattagtggacgaagaccagcacaggcagtagattctgttggatggcaaagtatatttgaatgggccacgcctctggtgcaagctcatcgatatgttgaactcttggatcctctcatatcatcttcttcctcttctcagattcctgaagttggagtcatccaaaaagttgttgatcttgtttattcttgtacacaacatgtaccatcaatgcgtccgaggatgtcacacgtcgtccatcagctacaacaattagctcagcctcctattgtaaagtaagtggataagagttatagatcagcatttcttttgactgaaaccagcctgcaatcttttatcctagttacaagggctaactgtattaggcatttattttttaaaacttgccaatgacatgcaaggccttgagccttgaaccagtccatgatggtttgagatgttatacaacaactaatttgtattaccaaagccagtatgttttcatctgctgctgctgctttgcattgtttacttgtaacacctat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0020J02.1" temp_strand="-" temp_description="C02SLm0020J02.1  AC226519.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0020J02 sequenced_by:kribb upload_account_name:korea">
        <position start="73609" stop="68039"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73308" g_stop="73007" g_length="302"/>
          <reference_exon_boundary r_type="cDNA" r_start="3" r_stop="306" r_length="304" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="73006" i_stop="72875" i_length="132">
            <donor d_prob="0.417" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72874" g_stop="72820" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="307" r_stop="361" r_length="55" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="72819" i_stop="71831" i_length="989">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.938" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="71830" g_stop="71411" g_length="420"/>
          <reference_exon_boundary r_type="cDNA" r_start="362" r_stop="781" r_length="420" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="71410" i_stop="71163" i_length="248">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="71162" g_stop="70604" g_length="559"/>
          <reference_exon_boundary r_type="cDNA" r_start="782" r_stop="1340" r_length="559" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="70603" i_stop="69113" i_length="1491">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="69112" g_stop="68339" g_length="774"/>
          <reference_exon_boundary r_type="cDNA" r_start="1341" r_stop="2114" r_length="774" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0020J02.1" gen_strand="-" ref_id="SGN-U566752" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>2110</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0020J02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U566752" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73308" e_stop="73007"/>
          <exon e_start="72874" e_stop="72820"/>
          <exon e_start="71830" e_stop="71411"/>
          <exon e_start="71162" e_stop="70604"/>
          <exon e_start="69112" e_stop="68339"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGTCATTAAAAATGGTGGGGACAAACATAAGGTGAGAAATTAACTACTCTGTCTGAACAAACACTTTCTTCTTCAAAGAAAATTCAACTAACCATTGGAGACTCCAAATGTGAACTCTTTACTCTTC--TTTTTTTTTTTTTTCCATCTAAACGAAAAACCCTATCCACAATGCCCAACCCCACACTCAAAATTAGTCTAGGTTTTGCTATACAGTGAGAACAAGTGATGATGGCTGTTAAACTTCCGTTCCCTTTGTTTCTACTTTCTTGTTTTCTGCTTCACCTCTGTGCTTCTACTTCTGTAAGTAAAGAAAAGATTATAGTAATAACTTTTTATTTAGAGAAAAGGGTGTCTGAATATGTTGTCAGAATTCATTTTAGTGTGTGAATTTGGAGAAAGTTTTGATTTTTATTTTTTTGATTTTTTTTTCAGGTTTCTAATAAGACACAAGTAGTTTCCTCTGCTGGGAATCAAAGTCATGATGATGGTAATGTTTTGGAATTAATTAGATTATTGTTCTGTCTATTTTCTTTGAACTGATAGATTGGCTTGTGCTGATTAGATTAGAGCTCTTTTCAGAATCAGTAATGGAGTTGCATCTATAATCATCTTTTCAACTTAATGTTCAACTACTCTATGTTACTTTGTGTATAATATGTTGGGATTTCTTACTGGTGCTTCTTATGTAATGCGTGTATATCTATGTGCCAATTGCTTATTTAAACTAGCATAGTGAACTTTTGGATTTGAAGCAAATAAAGGATGACAAATACAATCTTGTTTATCAAGTTTCTATAGGTTTAAGGTCTACAAGTTCGGGTGTTTTGTGCCAAACTATCATTCATAAATCAAGATTTTGAAAACTACGTCACTTCCCAGCATCATTAAGCTCAGGCCATAAAAGACTGTCTTGCAACTAGTTATCCCACAAAAATAGAAGATGAACTTGCAACTATTTATTTATCAGCTTCCTACTTCTTCTTAAAAAATTAATTGACCAGCCTCTCATTTCCAGTTTGCAAAGTTATGGATTTCCATTCCTTCAAGACAGTTGTTCTTGGAATATTCTTAGAACAATATTCTATTTGACTGATCGATTATCCTTCTAAGAAATCCTGGTGGTCATAATCACCTGATTGAATTTTATTTTTTCGGTCGAGAAAGGAGCAGACGTAGATTCTGCTCATTTCATGCTTAAAGGCATGTTTAGGTTACTCTTAAAGTGAAACTTTGGTTCTATTTGAGGGAGATAACATATATGCTTTTATGGTGGATCAATGATGGCGTTGATGAATAATGTTGTCCAGTTCCTTTCCTATTGAGGAACTCCTCCCTTGGATTATATTAATACACTAGTTCAACTGGAACTTATTTGGACCTCTCAACGTGGTTTTCTTAGTGTATATTTTTTGTTTTTACCGGTCAAGTTATTATGTCTCATCTCTTTGGCACCGTTGTTTATTGTTTCGCAAGCAGGAAGATGTGATCCTGGTTGGTTTAACGGCCCAAAAGGGAAAAAGTGCTTCAAATATTATGCTACGTCTTTGCAATGGAATGAATCAGAGACTTACTGCAATGGTTTTGGAGGAAACCTGGCTGCCATAACATCTTCAGAAGAACTGAACTTTGTCCAGAAGCTCTGTGGCAATGATAGTAACGGATGCTGGGTTGGTGGAAGGAGCATCAATATCACAGCTGGGTTGGGTTGGAAATGGTCTGATAATGCTTCTAGCTGGAATGAGAGTATTGCTCCTAAGACAACTTTGGACTCAAGTTGCAAAAATTTCTCATGCTATGGCTTTAAGTCGGTGGATTTGTGTACATCGATAATCAGTGGTGCTATTATAGCTGAGAGATGCAATGTAACTCATGCTTCTATATGCACACTTGATGCTGGTAAGTGATTGCAGACCAATTTATCTCTAATAGTTTCTTTCACCCAGTGTAATTTTGAAAAGTAGTAGCAAAACTCTTTCCCTGATATAGTGTGGTTATAATATGTGATTAAAAACTTCATAGTCCCCTTTTTTTTCCCCACGAGAAGTGCATTTTAGCTAACCATTATACAGGCCTACATTGTTATCTGGATAAATCTATTACATTCCTTAATTGTTTTTTATATAATCTTCTAAATTTTACATTAGGGAGCAAGTGTCGCCATATGCGGTGCCACAGGGAGTATCTCATTATTCTTGCAGTTGTTAGTGGGTTGATCCTTTGCACTACTTTGGCTATTGTGATATGGCTTCTTGTATTTAGGCGAAGTAAAAGACGCAAAAGATCATTGCGTGCTTCATTAGCATTAGTTCCCCCGTCTTGGAAAATTTTCAGTCGTGATGAAGTAAAGTCCATGACAAAGAATTTCAGTGAAGCAAATCGTCTCCTTGGGGACGCCAAAACAGGTGGTACCTATAGTGGGCTTTTACCTGATGGTTCAAGGGTGGCTGTGAAAAGATTGAAGAGGTGCGGTATTCAGAGGAAGAAAGAGTTCTACTCTGAGATTGGAAGGGTTGCAAGACTTCATCATTCAAATCTGGTATCTATCAAAGGATGTTGCTATCATCATGGTGACCGCTATATTCTGTACGAGTTCATCATCAATGGACCCCTGGATAGGTGGCTACACCATATTCCTAGAGGAGGTAGGAGTTTGGACTGGAGCATGAGAATGAAGGTCGCCACCACCCTTGCTCAAGGGATTGCGTAAGTAGTGTTCCAACATTATCTTCATGTGCATTGTAGATTAGGAATAAATATTTTAACTCATCCTTGAGGTGTATTGATTTTAGTCAGAAATGTGAGTTTATTCTTTAAATTTTATCATACTTCCATTCTTAGTCATGAGTATGAACTCATATATACATGTTTAGGTTGATGTCCAATGAAGATGTTATTGTGGAAGTCAAACAAGGGTGAAAATAGATGATAAGAATGCATTATCTATATTGTTAAGAAAAAAAGGTATTATACCTGTCCTGCAATATTCCTTTGCCTATTTTCTTTTTTCTTCTCTAGATATTTCATTCAGAAGAAATTCAAATACTGCACATCTTGACCAAGATACTTCTTGTTAACATATAATGCAATTAATAAATGAAAGCCTTTTTGGTTTACAACATCAGTTCCAGTGCCATGTAGAATTCACTTCCTAGGGATCTACCTATCTGCTTTTCCTACTCCAGCTAGATCTTACCATTGTCAAACGTGTCTTTGCAGCACTGCCCTTCTGGCTTCTCGTGTTTTCTTTCAGGTTTGGGGTGGATCTTTCCTTTCTCAATTATCACATACTCGGTTAGGTCGCCCGTGTGTGTCTTTCAATTTAAATTGTTTAAGCAGGAAATCTCTTCATGAATCTCACTAAATATTGTAGGAAAGCTATGATTGATTTTCTATTCGGGGATTCATTATTAAGTATTATGACCCTATTTAGGTGACAGAATTGTTGAACTTTTATCTAGTGAATATTTCCTTGACATGGAAATTATGGCGAATAAATTTTTCAGGGGTTTGTGAGACTACTCAGACCTAACCCCCAACAACAAATATACATGGAAGAAATATTGAAGTGTACAAAAAGAAGCCAATATATTATCCAATTATTCACGATGAGATAGTGAAGTAATCAGCATAAGATAGACAAAACCTTAGGCTTATCTACATCACCAGGTTTAATATATGCAATGCATTATGTATGGTCCCTGGTAGTTTAACTTTTCATGGACTTCTTTATTAAGAGGTATTATTTTCCATAATTTATTCAGTGTAAGTTGAAAAATATAGGCCACTTGAGTAAGCTGGGTTCGTTTTATAATGTACATACTTTTAAAGATTTCAATAGTTTGCAAGTACTTTGTAATTTTTATATTCTACAAGGAATTCAGACAGAAGTGAGTGAGAAAAGATGAAATACTTGAGGAAATGGATACCAGCGACATCTTAGTAAGAAAATAAAAACTGCATATTACTGTCCTGTTGTCTTCATGAGTTTTTGTTCCAGTCTGGTTGTGTTATGGTTGTATTTTTAACCATGAAAGGTGGTGACAGTTTTAAGACTCTGTTTTGTGCCACTGTCTCAGCTATTGCATAAGAGGAAGTGAGAGTGGCCAAAAGCATGACATCGTTTGTTTGCTAATGTCTATGATGGCAGTTTCTTTGCTTATATTGTTTAGTGCTTACTTCCATCAAATGTGACAGGTTTCTTCATGACAAAATGAAGCCACAAGTTGTGCATAGGGATATCCGTGCAAGCAATGTCCTTCTTGACGAAGAATTTGGCGCCCATCTAATGGGAGTTGGTCTGTCTAAGTTTGTGCCATGGGAAATCATGCACGAGAGGAGAGTCATGGCAGGTGGTACTCATGGGTATCTTGCTCCGGAGTTTGTTTACAGAAATGAGCTTACTACAAAGAGTGACGTCTACAGCTTTGGAGTCCTCTTGCTTGAAATAATTAGTGGACGAAGACCAGCACAGGCAGTAGATTCTGTTGGATGGCAAAGTATATTTGAATGGGCCACGCCTCTGGTGCAAGCTCATCGATATGTTGAACTCTTGGATCCTCTCATATCATCTTCTTCCTCTTCTCAGATTCCTGAAGTTGGAGTCATCCAAAAAGTTGTTGATCTTGTTTATTCTTGTACACAACATGTACCATCAATGCGTCCGAGGATGTCACACGTCGTCCATCAGCTACAACAATTAGCTCAGCCTCCTATTGTAAAGTAAGTGGATAAGAGTTATAGATCAGCATTTCTTTTGACTGAAACCAGCCTGCAATCTTTTATCCTAGTTACAAGGGCTAACTGTATTAGGCATTTATTTTTTAAAACTTGCCAATGACATGCAAGGCCTTGAGCCTTGAACCAGTCCATGATGGTTTGAGATGTTATACAACAACTAATTTGTATTACCAAAGCCAGTATGTTTTCATCTGCTGCTGCTGCTTTGCATTGTTTACTTGTAACACCTAT</genome_strand>
        <mrna_strand>GAAGTCATTAAAAATGGTGGGGACAAACATAAGGTGAGAAATTAACTACTCTGTCTGAACAAACACTTTCTTCTTCAAAGAAAATTCAACTAACCATTGGAGACTCCAAATGTGAACTCTTTACTCTTCTTTTTTTTTTTTTTTTCCATCTAAACGAAAAACCCTATCCACAATGCCCAACCCCACACTCAAAATTAGTCTAGGTTTTGCTATACAGTGAGAACAAGTGATGATGGCTGTTAAACTTCCGTTCCCTTTGTTTCTACTTTCTTGTTTTCTGCTTCACCTCTGTGCTTCTACTTCT....................................................................................................................................GTTTCTAATAAGACACAAGTAGTTTCCTCTGCTGGGAATCAAAGTCATGATGATG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGATGTGATCCTGGTTGGTTTAACGGCCCAAAAGGGAAAAAGTGCTTCAAATATTATGCTACGTCTTTGCAATGGAATGAATCAGAGACTTACTGCAATGGTTTTGGAGGAAACCTGGCTGCCATAACATCTTCAGAAGAACTGAACTTTGTCCAGAAGCTCTGTGGCAATGATAGTAACGGATGCTGGGTTGGTGGAAGGAGCATCAATATCACAGCTGGGTTGGGTTGGAAATGGTCTGATAATGCTTCTAGCTGGAATGAGAGTATTGCTCCTAAGACAACTTTGGACTCAAGTTGCAAAAATTTCTCATGCTATGGCTTTAAGTCGGTGGATTTGTGTACATCGATAATCAGTGGTGCTATTATAGCTGAGAGATGCAATGTAACTCATGCTTCTATATGCACACTTGATGCTG........................................................................................................................................................................................................................................................GGAGCAAGTGTCGCCATATGCGGTGCCACAGGGAGTATCTCATTATTCTTGCAGTTGTTAGTGGGTTGATCCTTTGCACTACTTTGGCTATTGTGATATGGCTTCTTGTATTTAGGCGAAGTAAAAGACGCAAAAGATCATTGCGTGCTTCATTAGCATTAGTTCCCCCGTCTTGGAAAATTTTCAGTCGTGATGAAGTAAAGTCCATGACAAAGAATTTCAGTGAAGCAAATCGTCTCCTTGGGGACGCCAAAACAGGTGGTACCTATAGTGGGCTTTTACCTGATGGTTCAAGGGTGGCTGTGAAAAGATTGAAGAGGTGCGGTATTCAGAGGAAGAAAGAGTTCTACTCTGAGATTGGAAGGGTTGCAAGACTTCATCATTCAAATCTGGTATCTATCAAAGGATGTTGCTATCATCATGGTGACCGCTATATTCTGTACGAGTTCATCATCAATGGACCCCTGGATAGGTGGCTACACCATATTCCTAGAGGAGGTAGGAGTTTGGACTGGAGCATGAGAATGAAGGTCGCCACCACCCTTGCTCAAGGGATTGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCTTCATGACAAAATGAAGCCACAAGTTGTGCATAGGGATATCCGTGCAAGCAATGTCCTTCTTGACGAAGAATTTGGCGCCCATCTAATGGGAGTTGGTCTGTCTAAGTTTGTGCCATGGGAAATCATGCACGAGAGGAGAGTCATGGCAGGTGGTACTCATGGGTATCTTGCTCCGGAGTTTGTTTACAGAAATGAGCTTACTACAAAGAGTGACGTCTACAGCTTTGGAGTCCTCTTGCTTGAAATAATTAGTGGACGAAGACCAGCACAGGCAGTAGATTCTGTTGGATGGCAAAGTATATTTGAATGGGCCACGCCTCTGGTGCAAGCTCATCGATATGTTGAACTCTTGGATCCTCTCATATCATCTTCTTCCTCTTCTCAGATTCCTGAAGTTGGAGTCATCCAAAAAGTTGTTGATCTTGTTTATTCTTGTACACAACATGTACCATCAATGCGTCCGAGGATGTCACACGTCGTCCATCAGCTACAACAATTAGCTCAGCCTCCTATTGTAAAGTAAGTGGATAAGAGTTATAGATCAGCATTTCTTTTGACTGAAACCAGCCTGCAATCTTTTATCCTAGTTACAAGGGCTAACTGTATTAGGCATTTATTTTTTAAAACTTGCCAATGACATGCAAGGCCTTGAGCCTTGAACCAGTCCATGATGGTTTGAGATGTTATACAACAACTAATTTGTATTACCAAAGCCAGTATGTTTTCATCTGCTGCTGCTGCTTTGCATTGTTTACTTGTAACACCTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U594400" ref_strand="+" ref_description="SGN-U594400 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>ccgagggtcatccaaaaagttgttgatcttgtttattcttgtacacaacatgtaccatcaatgcggcctctggtgatacacggaacatcataatctacaacaattagctcagcctcctattgtaaagtaagtggataagagttatagatcagcatttcttttgactgaaaccagcctgcaatcttttatcctagttacaagggctaactgtattaggcatttattttttaaaacttgccaatgacatgcaaggccttgagccttgaaccagtccatgatggtttgagatgttatacaacaactaatttgtattaccaaagccagtatgttttcatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0020J02.1" temp_strand="-" temp_description="C02SLm0020J02.1  AC226519.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0020J02 sequenced_by:kribb upload_account_name:korea">
        <position start="69009" stop="68078"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68712" g_stop="68378" g_length="335"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="336" r_length="336" r_score="0.937"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0020J02.1" gen_strand="-" ref_id="SGN-U594400" ref_strand="+">
        <total_alignment_score>0.937</total_alignment_score>
        <cumulative_length_of_scored_exons>335</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0020J02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U594400" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68712" e_stop="68378"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGGAGTCATCCAAAAAGTTGTTGATCTTGTTTATTCTTGTACACAACATGTACCATCAATGCGTCCGAGGATGTCACAC-GTCGTCCATCAGCTACAACAATTAGCTCAGCCTCCTATTGTAAAGTAAGTGGATAAGAGTTATAGATCAGCATTTCTTTTGACTGAAACCAGCCTGCAATCTTTTATCCTAGTTACAAGGGCTAACTGTATTAGGCATTTATTTTTTAAAACTTGCCAATGACATGCAAGGCCTTGAGCCTTGAACCAGTCCATGATGGTTTGAGATGTTATACAACAACTAATTTGTATTACCAAAGCCAGTATGTTTTCATC</genome_strand>
        <mrna_strand>CCGAGGGTCATCCAAAAAGTTGTTGATCTTGTTTATTCTTGTACACAACATGTACCATCAATGCGGCCTCTGGTGATACACGGAACATCATAATCTACAACAATTAGCTCAGCCTCCTATTGTAAAGTAAGTGGATAAGAGTTATAGATCAGCATTTCTTTTGACTGAAACCAGCCTGCAATCTTTTATCCTAGTTACAAGGGCTAACTGTATTAGGCATTTATTTTTTAAAACTTGCCAATGACATGCAAGGCCTTGAGCCTTGAACCAGTCCATGATGGTTTGAGATGTTATACAACAACTAATTTGTATTACCAAAGCCAGTATGTTTTCATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U575287" ref_strand="+" ref_description="SGN-U575287 Tomato 200607#2 [10 ESTs aligned] (*GB) gi|32488671|emb|CAE03598.1| (e_value=4e-101) OSJNBa0087O24.21 [Oryza sativa (japonica cultivar-group)]; (*ATH) AT1G78690.1 (e_value=7e-97) | Symbol: None | phospholipid/glycerol acyltransferase family protein, similar to SP:Q16635 Tafazzin from Homo sapiens; contains Pfam profile: PF01553 Acyltransferase | chr1:29601548-29603522 FORWARD | Aliases: F9K20.27, F9K20_27; (*SWP) sp|Q54DX7|TAZ1_DICDI (e_value=2e-28) Putative lysophosphatidylcholine acyltransferase OS=Dictyostelium discoideum GN=taz; ">
      <seq>gtgcccaatgaaaggagtttatgccgccggactttgacatcagtgtggaatttttgggaaatgggtggccggacgatggaatgggcggcgagagcaaaccacctggggggtatacctcggaaagtggtgatcacggcgataggtactttcgctaaggcggtggccaatctattgaacaccaccaccgtgcacaacggcgacgtccttatccggctagttcgatcccgcccagccggcgttcctctcctcaccgtcagcaatcacatgtccactttagatgacccagttatgtgggcattcaaaggttttccaatttgtgatgcaaagctggctcgatgggtactggcagcggaagacatatgctttaaaaatacagtattgtcatactttttccggatcggtgtgtaatctgttggtctgggaaatgtataccaataacaagagggggtggaatatatcaagaacatatgaacgaagctcttgatcgtttgactgaaggagcctggctgcatacatttccagaagggaaggtctgtcaagaagatgctcctataagacgattgaagtggggaactgccagtctcattgctcgtgcccccgtgactccaattgtcttgccaattatccatcatggttttgaaaaggttatgcctgagaactatgcttttgggagaagacctccagtccctttatggaaccaggagataaaaatagttgttggtgagccaatggaattcaaccttcctgaactgcgagagatggctctatctcagtctcgggattcatcatcttccagtgggcagtggccaagaaacatcctcgggggattgaacgaagcagcacaaaaatgtctgtacatgactatatctgatcaaatccgaactaccttggaaaacttaaggaattttagtaaatcttatgccaaggcagagcaataaagtaggcaatttccaagcattcaaagataaattcataagttgcatctgttttgaaggtcttgtaacttttcatttcaagattttgttagtttgagggtagacttctcatccccttaattgaggacacggggtaataagttccccagtatcatccttgtagctgcattttttaccataatgaaatgaaagatttcacatcaattctgaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0020J02.1" temp_strand="+" temp_description="C02SLm0020J02.1  AC226519.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0020J02 sequenced_by:kribb upload_account_name:korea">
        <position start="74153" stop="78278"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="74453" g_stop="74724" g_length="272"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="272" r_length="272" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="74725" i_stop="75015" i_length="291">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="75016" g_stop="75163" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="273" r_stop="420" r_length="148" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75164" i_stop="76314" i_length="1151">
            <donor d_prob="0.495" d_score="1.00"/>
            <acceptor a_prob="0.930" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="76315" g_stop="76400" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="421" r_stop="506" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="76401" i_stop="76714" i_length="314">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="76715" g_stop="76852" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="507" r_stop="644" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="76853" i_stop="77474" i_length="622">
            <donor d_prob="0.719" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="77475" g_stop="77978" g_length="504"/>
          <reference_exon_boundary r_type="cDNA" r_start="645" r_stop="1148" r_length="504" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1149" polyA_stop="1163"/>
      <MATCH_line gen_id="C02SLm0020J02.1" gen_strand="+" ref_id="SGN-U575287" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>1148</cumulative_length_of_scored_exons>
        <coverage percentage="0.987" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0020J02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U575287" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="74453" e_stop="74724"/>
          <exon e_start="75016" e_stop="75163"/>
          <exon e_start="76315" e_stop="76400"/>
          <exon e_start="76715" e_stop="76852"/>
          <exon e_start="77475" e_stop="77978"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGCCCAATGAAAGGAGTTTATGCCGCCGGACTTTGACATCAGTGTGGAATTTTTGGGAAATGGGTGGCCGGACGATGGAATGGGCGGCGAGAGCAAACCACCTGGGGGGTATACCTCGGAAAGTGGTGATCACGGCGATAGGTACTTTCGCTAAGGCGGTGGCCAATCTATTGAACACCACCACCGTGCACAACGGCGACGTCCTTATCCGGCTAGTTCGATCCCGCCCAGCCGGCGTTCCTCTCCTCACCGTCAGCAATCACATGTCCACGTAAGTCACTTTATCTCTTCATTACGAGCTTCCTGTGACAGAAAAAACTTGTTAGTAGAAATTTGGTGAAATTGTTTATTGGGTAAACTAGCTATTATTGAATTTAATGCTTAACGGACGAAGAATTACAGAAATATTTTGCTGATATTTGGTATGCGTATAGAGGATTCATATAAAAATTCCATTTTGGGGTTGAAGCATAGTTGATTTAATCATTGATAGAGTGAGTTTCTCGAATACTTTGATTGTTGTAGTCATGTCTCTTATTTCCTATTGTGTTTCTAACTGCAGTTTAGATGACCCAGTTATGTGGGCATTCAAAGGTTTTCCAATTTGTGATGCAAAGCTGGCTCGATGGGTACTGGCAGCGGAAGACATATGCTTTAAAAATACAGTATTGTCATACTTTTTCCGGATCGGTGTGTAATCTGTTGGTCTGGTACACTTCTGTTCTTGTATTTTCATGCCCTATCTTTTGGTGTTTTTATTACTTGTACGAACTTTATATCACAGTGGGATATATGGTAGACCATTCCTCAGTGTGTTTGGTGGGTGAATTGGAAGGAGAGGAACCAAAGATGTTTGAAAGTGGACATGTATTTTCATCGCAGATGCATTCCCTATGAGAATATTTACACTATGAAATATATATTTATTTCCCTTTTGGGATTTTGGTGTAGGCTAGAAGATGTCAAATACAGTTAATAGGATGATAGGTTTTCTCAGCTTCTTACAGTAATCGTAAAGGAACTGATCCGTATGTAATTTTTGGCATAATCCTAGTGCGTCATTTTACAACCTTACTATTCCTCAAAAATGAACTCCATATCATAGTAGGGTTCAAAAGTGAAAAGCAAAATGCAAGTTATGCTTTGTCAGTGGACATGCATTTTTGAAGCAGAATATTAGGTTCCCTTAGGAAGGACAGAGCATGTTCTTGCATAGATATTCTATCAAGAACTTTGAGAATATTTGGAGATCATTTACTTTTTAATGGTTCAGTAGTGAAGGGGCTTTTGGGTGTAGGAATGATGCAATAAATGTCTTTGGAATCAGCTGCATAATCGTGATAAAAATGTGTAACTACCTATGCTTATATAAACTGAAGTAGTGCCTCAAAACTCAAGGTGATATCTTGGTGGAATAGGACTTAGGTTTAGCTTGAAATTTCCATGTTAGCACTTACTCGAATCTGCATGCGCACCTGTGGTTTCTGTACCATTCACATGGATATTAAGCTTTTCATGCTGAGCGGTTATTCAGATTATCCATCCTCTTGTAGAGCAAGCTTCCATATCGAGCAATTATTCATTTCTGCACCTATACTTCTGTTCAACATGCTTCCGTATTGACCATTCAGATCTGGATCTGTCACTGTGTGGTTTATTCTCCACTGACATGTATAACAGTCAATTTTATATTTTCTTATTTATTTCCCTTGCCAAAACGTGAAACAGAGGACTCTTAATTTGATGTGCATTAGGGGATTTGAGGTTCTGGGTTTCATTTGCAGGCCTACATGAATTCCTCAATTTAATACAGAATGTAATTGTTGGTGGGGGTTACTACTCACTTTGTGAAGATGTGCAGGGAAATGTATACCAATAACAAGAGGGGGTGGAATATATCAAGAACATATGAACGAAGCTCTTGATCGTTTGACTGAAGGAGCCTGGGTAATTCGCCTTTTACCCTTGTATTCTTTCATCTAGTAATGGATGTTAATGTGAATTTTTTTATGCTTAGTCAATTGATCTTTTAGTACGCTCTAGGTGTTATTTTGTTACACTAAAATGGATATGCATATGATATGATATTATGTTATTCTGGAATTGAGGATTGAATTTGAAATGATCCAGTGTCACTTAACATAACCTCCATTTCATCCAGAAGTCATGAGAATGATGTATAATTTTGTCAACATTTCCTATTAAGTTTCCGCTAAATTGAAATGACATGTTTGGCTAAAGACCAACTTCCAAATGGGCAGCTGCATACATTTCCAGAAGGGAAGGTCTGTCAAGAAGATGCTCCTATAAGACGATTGAAGTGGGGAACTGCCAGTCTCATTGCTCGTGCCCCCGTGACTCCAATTGTCTTGCCAATTATCCATCATGGTTTTGAAAAGGTAGGTTCTTGAAATGATAGCTGTCCACACACAGAAACGAACAATGGGGCTAATGCCTAAATAGCAAGGGACAATGGATTCATTTGGTTTCGGTTGTGTAGGCAGGCCTTAGGATGTTCGAATTATTGTTATTCTGTAATTTATAGTACCTGTCTAGTTATATATTTCACATTGGTTGTTTAATTCACGTGTTTCAGTACTAATTTTATCGTAAGAATAAGGTAGTGTAGCTTAGAGGATAGAGGTTATGCAGTTCCGAAAGTGTTTTAAAATCACTCTGTTGCATTTATGGCACTGCTTCATTGTTGTTATGAAGTTCATTGATTCTTTTGTGAACTTCACCAATAAATTGAGCCAATACCGTAGTTGCTTTCTCCTTTCCCTCCTGTCCAATCCTAGGAAAAGAAAATAAGAGTGGCCAAAATGCTGCGACTGTCTAACAATCTTCTGTTCTTCTTTATGCTCAAACCATTTTTGAGGAGATAAAATACGCACACATGCACACATGCATCCGTCGTATCCATATTAAGTATTGATTATGAGATTGAACCAGCGTTTATTTATATAATTCAAATTTGATCCTTGGGATTGTGATGCATTGTGTGCTTTGATCAATTTTCAGGTTATGCCTGAGAACTATGCTTTTGGGAGAAGACCTCCAGTCCCTTTATGGAACCAGGAGATAAAAATAGTTGTTGGTGAGCCAATGGAATTCAACCTTCCTGAACTGCGAGAGATGGCTCTATCTCAGTCTCGGGATTCATCATCTTCCAGTGGGCAGTGGCCAAGAAACATCCTCGGGGGATTGAACGAAGCAGCACAAAAATGTCTGTACATGACTATATCTGATCAAATCCGAACTACCTTGGAAAACTTAAGGAATTTTAGTAAATCTTATGCCAAGGCAGAGCAATAAAGTAGGCAATTTCCAAGCATTCAAAGATAAATTCATAAGTTGCATCTGTTTTGAAGGTCTTGTAACTTTTCATTTCAAGATTTTGTTAGTTTGAGGGTAGACTTCTCATCCCCTTAATTGAGGACACGGGGTAAT-ATTTTCCCAGTATCATCCTTGTAGCTGCATTTTTTTGCATTTTGAAATGAAAGATTTCACATCAATTCTTGAAAA</genome_strand>
        <mrna_strand>GTGCCCAATGAAAGGAGTTTATGCCGCCGGACTTTGACATCAGTGTGGAATTTTTGGGAAATGGGTGGCCGGACGATGGAATGGGCGGCGAGAGCAAACCACCTGGGGGGTATACCTCGGAAAGTGGTGATCACGGCGATAGGTACTTTCGCTAAGGCGGTGGCCAATCTATTGAACACCACCACCGTGCACAACGGCGACGTCCTTATCCGGCTAGTTCGATCCCGCCCAGCCGGCGTTCCTCTCCTCACCGTCAGCAATCACATGTCCAC...................................................................................................................................................................................................................................................................................................TTTAGATGACCCAGTTATGTGGGCATTCAAAGGTTTTCCAATTTGTGATGCAAAGCTGGCTCGATGGGTACTGGCAGCGGAAGACATATGCTTTAAAAATACAGTATTGTCATACTTTTTCCGGATCGGTGTGTAATCTGTTGGTCTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAAATGTATACCAATAACAAGAGGGGGTGGAATATATCAAGAACATATGAACGAAGCTCTTGATCGTTTGACTGAAGGAGCCTGG..........................................................................................................................................................................................................................................................................................................................CTGCATACATTTCCAGAAGGGAAGGTCTGTCAAGAAGATGCTCCTATAAGACGATTGAAGTGGGGAACTGCCAGTCTCATTGCTCGTGCCCCCGTGACTCCAATTGTCTTGCCAATTATCCATCATGGTTTTGAAAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATGCCTGAGAACTATGCTTTTGGGAGAAGACCTCCAGTCCCTTTATGGAACCAGGAGATAAAAATAGTTGTTGGTGAGCCAATGGAATTCAACCTTCCTGAACTGCGAGAGATGGCTCTATCTCAGTCTCGGGATTCATCATCTTCCAGTGGGCAGTGGCCAAGAAACATCCTCGGGGGATTGAACGAAGCAGCACAAAAATGTCTGTACATGACTATATCTGATCAAATCCGAACTACCTTGGAAAACTTAAGGAATTTTAGTAAATCTTATGCCAAGGCAGAGCAATAAAGTAGGCAATTTCCAAGCATTCAAAGATAAATTCATAAGTTGCATCTGTTTTGAAGGTCTTGTAACTTTTCATTTCAAGATTTTGTTAGTTTGAGGGTAGACTTCTCATCCCCTTAATTGAGGACACGGGGTAATAAGTTCCCCAGTATCATCCTTGTAGCTGCATTTTTTACCATAATGAAATGAAAGATTTCACATCAATTC-TGAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U579169" ref_strand="+" ref_description="SGN-U579169 Tomato 200607#2 [6 ESTs aligned] (*GB) gi|157348752|emb|CAO23644.1| (e_value=4e-99) unnamed; ">
      <seq>ctccgctattcccttttccagttcccagccctgaaaacagtagaagaaactgtgtcatcgcttttaccactccccaaaactacgcaccaagattatctgaactcatacatctcaaaggatggacacccctttggtgtcctaccgtcattgttgaatctacggaacaaacaatctcttccattcatcactacctcaacccacaagctggtatcgatgaacccaattcgtttcttgaagaattttcagctctagcgttcacttcaagaactgggattactgctttttcacaagctttatctatgaaccccacacccccattaaccccaaatggagaaattctcacaattgcagctttgggtaatgatgctgagcttctggatcgagatttcattcgaaaaatgtgtgaaaaccctgaaagaattcgagttttggttccttcagttgcaaccccatctgggttagtggaggcattaggattaggtcaaggaagaaaagtgttatgcccagttccattagtgattgggttgaatgaaccacctgttgtgccgaaattccttgatgatttatcgaaaagggggtggattccattgagattagacgcgtatgagacgcgatgggcaggggcgacatgcgctgtggatgtggtggcaaagagtgaagaagagtgtggatttgatgcaattgtgtttactagtactggagaagtggaaggtttgttgaagagtttggaggaatttggattggattggtcaatggtgaggaggagatgtccaagaatggtggtggcagctcatggccctgttacagctgctggtgctgagagtttgggtgttggcattgatgtggtaagttcaaattttggtagctttgatggtgtggttgatgcattagctcataaatggaaatcattgcaaaatcaagaatcttgaaatttggtttttgctcatcattcaaagttttgattggagctacaatttgctatttatagccaaaacttctataattgtctagttcacagcatgtctttttgttttgtactaatttggaaaagttttagtaatttttgatgttgtgagttacaaagttttgatgtttatatggatgcaacatttctcataaatgcaatcaattgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0020J02.1" temp_strand="+" temp_description="C02SLm0020J02.1  AC226519.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0020J02 sequenced_by:kribb upload_account_name:korea">
        <position start="78041" stop="79774"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="78341" g_stop="79474" g_length="1134"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1134" r_length="1134" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0020J02.1" gen_strand="+" ref_id="SGN-U579169" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1134</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0020J02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U579169" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="78341" e_stop="79474"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCCGCTATTCCCTTTTCCAGTTCCCAGCCCTGAAAACAGTAGAAGAAACTGTGTCATCGCTTTTACCACTCCCCAAAACTACGCACCAAGATTATCTGAACTCATACATCTCAAAGGATGGACACCCCTTTGGTGTCCTACCGTCATTGTTGAATCTACGGAACAAACAATCTCTTCCATTCATCACTACCTCAACCCACAAGCTGGTATCGATGAACCCAATTCGTTTCTTGAAGAATTTTCAGCTCTAGCGTTCACTTCAAGAACTGGGATTACTGCTTTTTCACAAGCTTTATCTATGAACCCCACACCCCCATTAACCCCAAATGGAGAAATTCTCACAATTGCAGCTTTGGGTAATGATGCTGAGCTTCTGGATCGAGATTTCATTCGAAAAATGTGTGAAAACCCTGAAAGAATTCGAGTTTTGGTTCCTTCAGTTGCAACCCCATCTGGGTTAGTGGAGGCATTAGGATTAGGTCAAGGAAGAAAAGTGTTATGCCCAGTTCCATTAGTGATTGGGTTGAATGAACCACCTGTTGTGCCGAAATTCCTTGATGATTTATCGAAAAGGGGGTGGATTCCATTGAGATTAGACGCGTATGAGACGCGATGGGCAGGGGCGACATGCGCTGTGGATGTGGTGGCAAAGAGTGAAGAAGAGTGTGGATTTGATGCAATTGTGTTTACTAGTACTGGAGAAGTGGAAGGTTTGTTGAAGAGTTTGGAGGAATTTGGATTGGATTGGTCAATGGTGAGGAGGAGATGTCCAAGAATGGTGGTGGCAGCTCATGGCCCTGTTACAGCTGCTGGTGCTGAGAGTTTGGGTGTTGGCATTGATGTGGTAAGTTCAAATTTTGGTAGCTTTGATGGTGTGGTTGATGCATTAGCTCATAAATGGAAATCATTGCAAAATCAAGAATCTTGAAATTTGGTTTTTGCTCATCATTCAAAGTTTTGATTGGAGCTACAATTTGCTATTTATAGCCAAAACTTCTATAATTGTCTAGTTCACAGCATGTCTTTTTGTTTTGTACTAATTTGGAAAAGTTTTAGTAATTTTTGATGTTGTGAGTTACAAAGTTTTGATGTTTATATGGATGCAACATTTCTCATAAATGCAATCAATTGGA</genome_strand>
        <mrna_strand>CTCCGCTATTCCCTTTTCCAGTTCCCAGCCCTGAAAACAGTAGAAGAAACTGTGTCATCGCTTTTACCACTCCCCAAAACTACGCACCAAGATTATCTGAACTCATACATCTCAAAGGATGGACACCCCTTTGGTGTCCTACCGTCATTGTTGAATCTACGGAACAAACAATCTCTTCCATTCATCACTACCTCAACCCACAAGCTGGTATCGATGAACCCAATTCGTTTCTTGAAGAATTTTCAGCTCTAGCGTTCACTTCAAGAACTGGGATTACTGCTTTTTCACAAGCTTTATCTATGAACCCCACACCCCCATTAACCCCAAATGGAGAAATTCTCACAATTGCAGCTTTGGGTAATGATGCTGAGCTTCTGGATCGAGATTTCATTCGAAAAATGTGTGAAAACCCTGAAAGAATTCGAGTTTTGGTTCCTTCAGTTGCAACCCCATCTGGGTTAGTGGAGGCATTAGGATTAGGTCAAGGAAGAAAAGTGTTATGCCCAGTTCCATTAGTGATTGGGTTGAATGAACCACCTGTTGTGCCGAAATTCCTTGATGATTTATCGAAAAGGGGGTGGATTCCATTGAGATTAGACGCGTATGAGACGCGATGGGCAGGGGCGACATGCGCTGTGGATGTGGTGGCAAAGAGTGAAGAAGAGTGTGGATTTGATGCAATTGTGTTTACTAGTACTGGAGAAGTGGAAGGTTTGTTGAAGAGTTTGGAGGAATTTGGATTGGATTGGTCAATGGTGAGGAGGAGATGTCCAAGAATGGTGGTGGCAGCTCATGGCCCTGTTACAGCTGCTGGTGCTGAGAGTTTGGGTGTTGGCATTGATGTGGTAAGTTCAAATTTTGGTAGCTTTGATGGTGTGGTTGATGCATTAGCTCATAAATGGAAATCATTGCAAAATCAAGAATCTTGAAATTTGGTTTTTGCTCATCATTCAAAGTTTTGATTGGAGCTACAATTTGCTATTTATAGCCAAAACTTCTATAATTGTCTAGTTCACAGCATGTCTTTTTGTTTTGTACTAATTTGGAAAAGTTTTAGTAATTTTTGATGTTGTGAGTTACAAAGTTTTGATGTTTATATGGATGCAACATTTCTCATAAATGCAATCAATTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U602015" ref_strand="+" ref_description="SGN-U602015 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>gttaacatctctttctctctctggtaccgatctttcttctaagtaaagctccattttcagcagaaattcaaaatgggtttcatcatatcctcttcgtattctcatatattctgagatttcctatttctaatttctgagcttatgaacaccatttttgcttagctacacgaagccccaaaacaagagaacacaaacccagaggtttttaggcgttttattatgagttacacctcataccatgctgttttgttaaatggggttttgcgttttttctgttttgttactgtggtttctcgatctactgcactgggttacgacttattgtcttttttaccaatgtgaactaccaagttcgaatttttaaagtattttatactgttctgtgcttgtgggtacatggatcttggtgggtaatttctttggtgcttgattagtagaaaacattgctggtaattagggagcttgctaagttatctgattttcatgagttttctgtgagctttgtagcatatcgtgcaatgttgatcgtatttttgtgattctgtttggatttttagtgttgattttggtttgggccttctgttgactatttgttgaaattggcttcttctttatgccggggttataatgttttggacttctttgatttttagtatcatggtgttactaaattggttaggtaactgctgaagttattgaagattaccgtttaattgaggagttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0020J02.1" temp_strand="+" temp_description="C02SLm0020J02.1  AC226519.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0020J02 sequenced_by:kribb upload_account_name:korea">
        <position start="88130" stop="89454"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88429" g_stop="89154" g_length="726"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="724" r_length="724" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0020J02.1" gen_strand="+" ref_id="SGN-U602015" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>726</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0020J02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U602015" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88429" e_stop="89154"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTAACATCTCTTTCTCTCTCTGGTACCGATCTTTCTTCTAAGTAAAGCTCCATTTTCAGCAGAAATTCAAAATGGGTTTCATCATATCCTCTTCGTATTCTCATATATTCTGAGATTTCCTATTTCTAATTTCTGAGCTTATGAACACCATTTTTGCTTAGCTACACGAAGCCCCAAAACAAGAGAACACAAACCCAGAGGTTTTTAGGCGTTTTATTATGAGTTACACCTCATACCATGCTGTTTTGTTAAATGGGGTTTTGCGTTTTTTCTGTTTTGTTACTGTGGTTTCTCGATCTACTGCACTGGGTTACGACTTATTGTCTTTTTTACCAATGTGAACTACCAAGTTCGAATTTTTAAAGTATTTTATACTGTTCTGTGCTTGTGGGTACATGGATCTTGGTGGGTAATTTCTTTGGTGCTTGATTAGTAGAAAACATTGCTGGTAATTAGGGAGCTTGCTAAGTTATCTGATTTTCATGAGTTTTCTGTGAGCTTTGTAGCATATCGTGCAATGTTGATCGTATTTTTGTGATTCTGTTTGGATTTTTAGTGTTGATTTTGGTTTGGGACTTCTGTTGACTATTTGTTGAAATTGGCTTCTTCTTTAATGCGGGGGTTATATGTTTTTGGACTTCTTTGATTTTTAGTAATCATGGTGTTACTAAATTGGTTAGGTAACTGCTGAAGTTATTGAAGATTACCGTTTAATTGAGGAGTTG</genome_strand>
        <mrna_strand>GTTAACATCTCTTTCTCTCTCTGGTACCGATCTTTCTTCTAAGTAAAGCTCCATTTTCAGCAGAAATTCAAAATGGGTTTCATCATATCCTCTTCGTATTCTCATATATTCTGAGATTTCCTATTTCTAATTTCTGAGCTTATGAACACCATTTTTGCTTAGCTACACGAAGCCCCAAAACAAGAGAACACAAACCCAGAGGTTTTTAGGCGTTTTATTATGAGTTACACCTCATACCATGCTGTTTTGTTAAATGGGGTTTTGCGTTTTTTCTGTTTTGTTACTGTGGTTTCTCGATCTACTGCACTGGGTTACGACTTATTGTCTTTTTTACCAATGTGAACTACCAAGTTCGAATTTTTAAAGTATTTTATACTGTTCTGTGCTTGTGGGTACATGGATCTTGGTGGGTAATTTCTTTGGTGCTTGATTAGTAGAAAACATTGCTGGTAATTAGGGAGCTTGCTAAGTTATCTGATTTTCATGAGTTTTCTGTGAGCTTTGTAGCATATCGTGCAATGTTGATCGTATTTTTGTGATTCTGTTTGGATTTTTAGTGTTGATTTTGGTTTGGGCCTTCTGTTGACTATTTGTTGAAATTGGCTTCTTCTTT-ATGCCGGGGTTATAATGTTTTGGACTTCTTTGATTTTTAGT-ATCATGGTGTTACTAAATTGGTTAGGTAACTGCTGAAGTTATTGAAGATTACCGTTTAATTGAGGAGTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U567056" ref_strand="-" ref_description="SGN-U567056 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|1369852|gb|AAB37756.1| (e_value=7e-167) kinesin; (*ATH) AT5G65930.2 (e_value=2e-138) | Symbol: None | kinesin-like calmodulin-binding protein (ZWICHEL), identical to kinesin-like protein GI:2224925 from (Arabidopsis thaliana) | chr5:26387427-26393746 REVERSE | Aliases: None; (*SWP) sp|P46864|ATK2_ARATH (e_value=1e-54) Kinesin-2 OS=Arabidopsis thaliana GN=ATK2; ">
      <seq>gaaatgaaagaggatattgatcgaaaaaatgcacaaactgctgccatcttgaaaatgcaaggggctcaattggcagaaatggaagcactttaccgggaagaacaagttctaaggaaaaagtatttcaacataatagaagatatgaaaggcaagatcagagtctactgtagattaagaccactttgtgaaaaggaaattatagcaaaggaaagaaatgccatcagaagtgttgatgagtttactgttgaacatttatggaaagatgataaagcaaaacagcacatgtatgatcgtgtctttgatggaaatgccacccaagatgatgtgttcgaagatactaagtacttggttcaatcagctgttgatggatataatgtttgcatatttgcatatggacagactggatctggcaagacattcacaatctatggagctgatagtaatccaggactgacaccaagagctatgtccgaactctttcgaattatgaaaaaagaccgtaatacgttctctttctctttaaaggcgtacatggtagagttgtatcaggatacgttggtggatcttttattgccaaagcaagcaaagcgcttgaaattggatataaaaaaggacgcaaagggcatggtttctgtggagaatgtgacagtggtgtctatttcaacgtacgaggagcttaagacaataatccaaagaggatctgaacagcgtcatacgactggaaccttgatgaatgagcagagttcaagatctcatcttattgtttcagttattatcgagagtaccaatcttcaaactccggcgattgccacagggaagctgagttttgtggatcttgctggctcagaaagagttaaaaagtctggctcagctggcaaccaattacaagaagctcaaagcattaacaagtccctgccagcacttggtgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0020J02.1" temp_strand="+" temp_description="C02SLm0020J02.1  AC226519.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0020J02 sequenced_by:kribb upload_account_name:korea">
        <position start="95057" stop="97591"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95057" g_stop="95067" g_length="11"/>
          <reference_exon_boundary r_type="cDNA" r_start="2" r_stop="12" r_length="11" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="95068" i_stop="95365" i_length="298">
            <donor d_prob="0.966" d_score="0.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="95366" g_stop="95492" g_length="127"/>
          <reference_exon_boundary r_type="cDNA" r_start="13" r_stop="139" r_length="127" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="95493" i_stop="95586" i_length="94">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="95587" g_stop="95789" g_length="203"/>
          <reference_exon_boundary r_type="cDNA" r_start="140" r_stop="342" r_length="203" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="95790" i_stop="95883" i_length="94">
            <donor d_prob="0.938" d_score="1.00"/>
            <acceptor a_prob="0.808" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="95884" g_stop="96066" g_length="183"/>
          <reference_exon_boundary r_type="cDNA" r_start="343" r_stop="525" r_length="183" r_score="0.989"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="96067" i_stop="96450" i_length="384">
            <donor d_prob="0.642" d_score="0.96"/>
            <acceptor a_prob="0.879" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="96451" g_stop="96546" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="526" r_stop="621" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="96547" i_stop="96695" i_length="149">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="96696" g_stop="96893" g_length="198"/>
          <reference_exon_boundary r_type="cDNA" r_start="622" r_stop="819" r_length="198" r_score="0.990"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="96894" i_stop="97179" i_length="286">
            <donor d_prob="0.972" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="97180" g_stop="97291" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="820" r_stop="931" r_length="112" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0020J02.1" gen_strand="+" ref_id="SGN-U567056" ref_strand="-">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>930</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0020J02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U567056" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="95057" e_stop="95067"/>
          <exon e_start="95366" e_stop="95492"/>
          <exon e_start="95587" e_stop="95789"/>
          <exon e_start="95884" e_stop="96066"/>
          <exon e_start="96451" e_stop="96546"/>
          <exon e_start="96696" e_stop="96893"/>
          <exon e_start="97180" e_stop="97291"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATGAAAGAGGTGAACATCTTGTACTAATATTTACAACAACTATGGTTCTATCCCAAGTCAGTTGCTTTCGCTTATGTGATCCTCAGTACCCATTGGTTTTGAATTGCAAGGGTTCATGATTCAAAACTAATTTATACTGGCAGTGCACTTACTATACCTCTTCCTTTTGATATTTTGGAACTGGCAATGTTAGCAAGCTCACACAGCCAAAGTTTATGCTTAGATATTTGTGTTATAATATATGCCCTATTTGTTATGGCATATCAAGCATCATATTTTCATTTTTAATTTGACAATTATTTAACAGGATATTGATCGAAAAAATGCACAAACTGCTGCCATCTTGAAAATGCAAGGGGCTCAATTGGCAGAAATGGAAGCACTTTACCGGGAAGAACAAGTTCTAAGGAAAAAGTATTTCAACATAATAGAAGGTAAAGTTACCGGCCTTTTTTTTTGCGCCACTGAACAAAAATTATTTGCTATTTCTATTGAAGTGTAATGTTATGGACCTTACTCATGTCTCAGATATGAAAGGCAAGATCAGAGTCTACTGTAGATTAAGACCACTTTGTGAAAAGGAAATTATAGCAAAGGAAAGAAATGCCATCAGAAGTGTTGATGAGTTTACTGTTGAACATTTATGGAAAGATGATAAAGCAAAACAGCACATGTATGATCGTGTCTTTGATGGAAATGCCACCCAAGATGATGTGTTCGAAGATACTAAGGTAAGCAAGAAGTCAATTGATTTCGCTGAGAACTCTGTTAGGATCTAATCTATATTGCCTACCATTTTCTAAGTTTGACATGTTGGTGGTGCAGTACTTGGTTCAATCAGCTGTTGATGGATATAATGTTTGCATATTTGCATATGGACAGACTGGATCTGGCAAGACATTCACAATCTATGGAGCTGATAGTAATCCAGGACTGACACCAAGAGCTATGTCCGAACTCTTTCGAATTATGAAAAAAGACAGTAATAAGTTCTCTTTCTCTTTAAAGGTAGACTCTTCCCATTCTTAAAAGATTATGATAGGTTTTTATTCCGGCTTTAATTAATTTAGGTAGTACATCAATTATGCTTCAAATTACCTTACCTTATAAAGAAGCCACATTAATTATGCTGTGCTTCAAGTTTTTAAATTTCCACTTCTTCAGTGACATTTATTACAAAAGTTGTCAAGACTATGAGTGTTTGAATGTTTTCACCTTTTGAGAATGAGTAAATAAAAACAAATCATTTTTTTTTCAAAAAAATCTTTTCAACTTGTTTTGTTTTCATAAGATTTCTCTCCTTATTCGGTGCTTGTAAGTGATACAGTACCTGAATAGATGGATTTCCAGAAGGCTCATTGTAAACTCACGAGTGTTTATGAACTTGTTCAGGCGTACATGGTAGAGTTGTATCAGGATACGTTGGTGGATCTTTTATTGCCAAAGCAAGCAAAGCGCTTGAAATTGGATATAAAAAAGGACGCAAAGGTGATTGTTATTTGGAGCTTCTTAAATTATCAATACTTAATATGTCAATAAGTCCTTTGCAGTTCTCTTTTCATTTTACTAAGCTTGGATAAGCTTATGTTTATCTTTTAATTTTGGCTGTAACAATTAGCAAAATTTGGCTCAAACAGGGCATGGTTTCTGTGGAGAATGTGACAGTGGTGTCTATTTCAACGTACGAGGAGCTTAAGACAATAATCCAAAGAGGATCTGAACAGCGTCATACGACTGGAACCTTGATGAATGAGCAGAGTTCAAGATCTCATCTTATTGTTTCAGTTATTATCGAGAGTACCAATCTTCAAACTCAGGCGATTGCCAGAGGGAAGGTAGGTGTATCACACCCTTCTGCTTAATTGCCACAATTTGAACTAGTGCGACTTATATGATGTGCATTCTTGGGAATTTCAAAGTGCATCTAGATAGAAGATAGTGATATTGGTCCCTCACTTTTGCTTTAGTTTGAATATTAAACCTCTTCGCATCCTTATAGTTTGATGGAGTAGCTCAAGTTTTATTTCTTAGCATCTTTAGGTAGATTTTAGAGCTAGTATATCTAAAAAGTTTAGCTTTGTATCTTTTGCTTATGCTTTATTCTTTTCTCTGTGTCTGCAGCTGAGTTTTGTGGATCTTGCTGGCTCAGAAAGAGTTAAAAAGTCTGGCTCAGCTGGCAATCAATTAAAAGAAGCTCAAAGCATTAACAAGTCCCTGTCAGCACTTGGTGATG</genome_strand>
        <mrna_strand>AAATGAAAGAG..........................................................................................................................................................................................................................................................................................................GATATTGATCGAAAAAATGCACAAACTGCTGCCATCTTGAAAATGCAAGGGGCTCAATTGGCAGAAATGGAAGCACTTTACCGGGAAGAACAAGTTCTAAGGAAAAAGTATTTCAACATAATAGAAG..............................................................................................ATATGAAAGGCAAGATCAGAGTCTACTGTAGATTAAGACCACTTTGTGAAAAGGAAATTATAGCAAAGGAAAGAAATGCCATCAGAAGTGTTGATGAGTTTACTGTTGAACATTTATGGAAAGATGATAAAGCAAAACAGCACATGTATGATCGTGTCTTTGATGGAAATGCCACCCAAGATGATGTGTTCGAAGATACTAAG..............................................................................................TACTTGGTTCAATCAGCTGTTGATGGATATAATGTTTGCATATTTGCATATGGACAGACTGGATCTGGCAAGACATTCACAATCTATGGAGCTGATAGTAATCCAGGACTGACACCAAGAGCTATGTCCGAACTCTTTCGAATTATGAAAAAAGACCGTAATACGTTCTCTTTCTCTTTAAAG................................................................................................................................................................................................................................................................................................................................................................................................GCGTACATGGTAGAGTTGTATCAGGATACGTTGGTGGATCTTTTATTGCCAAAGCAAGCAAAGCGCTTGAAATTGGATATAAAAAAGGACGCAAAG.....................................................................................................................................................GGCATGGTTTCTGTGGAGAATGTGACAGTGGTGTCTATTTCAACGTACGAGGAGCTTAAGACAATAATCCAAAGAGGATCTGAACAGCGTCATACGACTGGAACCTTGATGAATGAGCAGAGTTCAAGATCTCATCTTATTGTTTCAGTTATTATCGAGAGTACCAATCTTCAAACTCCGGCGATTGCCACAGGGAAG..............................................................................................................................................................................................................................................................................................CTGAGTTTTGTGGATCTTGCTGGCTCAGAAAGAGTTAAAAAGTCTGGCTCAGCTGGCAACCAATTACAAGAAGCTCAAAGCATTAACAAGTCCCTGCCAGCACTTGGTGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U567055" ref_strand="+" ref_description="SGN-U567055 Tomato 200607#2 [6 ESTs aligned] (*GB) gi|1369852|gb|AAB37756.1| (e_value=7e-84) kinesin; (*ATH) AT5G65930.2 (e_value=2e-70) | Symbol: None | kinesin-like calmodulin-binding protein (ZWICHEL), identical to kinesin-like protein GI:2224925 from (Arabidopsis thaliana) | chr5:26387427-26393746 REVERSE | Aliases: None; (*SWP) sp|O81635|ATK4_ARATH (e_value=1e-30) Kinesin-4 OS=Arabidopsis thaliana GN=ATK4; ">
      <seq>gcaatcttcaaactcaggcgattgccagagggaagctgagttttgtggatcttgctgacccagaaagagttaaaaagtctggctcagctggcaatcaattaaaagaagctcaaagcattaacaagtccctgtcagcacttggtgatgttataagtgcattatcttcaggaaatcaacacattccttatcgaaatcacaagctaaccatgttgatgagcgactcgttaggtggaaatgctaaaaccctgatgtttgtaaacatctctccagcagaatcaaacttggatgagactcacaattccttgacgtatgcatcaagagttcgttctattgtaaatgatcccagcaaaaatgtttcctctaaggaagtcgctcgtttaaagaagctggtctcatattggaaggaacaagctggtagaaaaggagatgatgaggaattggaggaaatccaagacgaacgaccatctaaagacaagaatgatggtcgttattccatgtaaaacctctcgaattgaacacgcggaacgaaaatcaagttatcttgtttagctgcctcaaaagtgatgaggaaaatagtgaacaattgaacagcttgttcaagctgtgttactaagtggtttgagattttccttcccagaattttgttgtctgattgggtggcttaaagaagttagtttagggagtcctcaatcctcatgttgtatagagttatatgtgtatattatatcaatcaatggttaactacattctttctcccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0020J02.1" temp_strand="+" temp_description="C02SLm0020J02.1  AC226519.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0020J02 sequenced_by:kribb upload_account_name:korea">
        <position start="96560" stop="98349"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="96859" g_stop="96893" g_length="35"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="35" r_length="35" r_score="0.971"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="96894" i_stop="97179" i_length="286">
            <donor d_prob="0.972" d_score="0.00"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="97180" g_stop="97451" g_length="272"/>
          <reference_exon_boundary r_type="cDNA" r_start="36" r_stop="307" r_length="272" r_score="0.993"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="97452" i_stop="97598" i_length="147">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="97599" g_stop="98049" g_length="451"/>
          <reference_exon_boundary r_type="cDNA" r_start="308" r_stop="758" r_length="451" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0020J02.1" gen_strand="+" ref_id="SGN-U567055" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>758</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0020J02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U567055" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="96859" e_stop="96893"/>
          <exon e_start="97180" e_stop="97451"/>
          <exon e_start="97599" e_stop="98049"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAATCTTCAAACTCAGGCGATTGCCAGAGGGAAGGTAGGTGTATCACACCCTTCTGCTTAATTGCCACAATTTGAACTAGTGCGACTTATATGATGTGCATTCTTGGGAATTTCAAAGTGCATCTAGATAGAAGATAGTGATATTGGTCCCTCACTTTTGCTTTAGTTTGAATATTAAACCTCTTCGCATCCTTATAGTTTGATGGAGTAGCTCAAGTTTTATTTCTTAGCATCTTTAGGTAGATTTTAGAGCTAGTATATCTAAAAAGTTTAGCTTTGTATCTTTTGCTTATGCTTTATTCTTTTCTCTGTGTCTGCAGCTGAGTTTTGTGGATCTTGCTGGCTCAGAAAGAGTTAAAAAGTCTGGCTCAGCTGGCAATCAATTAAAAGAAGCTCAAAGCATTAACAAGTCCCTGTCAGCACTTGGTGATGTTATAAGTGCATTATCTTCAGGAAATCAACACATTCCTTATCGAAATCACAAGCTAACCATGTTGATGAGCGACTCGTTAGGTGGAAATGCTAAAACCCTGATGTTTGTAAACATCTCTCCAGCAGAATCAAACTTGGATGAGACTCACAATTCCTTGACGTATGTTCTTTATTGTTTCACTTCTTTATCATGTTATTCATATTTACATGAGCGAATAACTTTCCTCCTTCAATTGGTCATGTCAATCATACGACTTGTATTCAATGGTTACAACTTATCTAGGAATTTGGTTTCCATGCTTCACAGGTATGCATCAAGAGTTCGTTCTATTGTAAATGATCCCAGCAAAAATGTTTCCTCTAAGGAAGTCGCTCGTTTAAAGAAGCTGGTCTCATATTGGAAGGAACAAGCTGGTAGAAAAGGAGATGATGAGGAATTGGAGGAAATCCAAGACGAACGACCATCTAAAGACAAGAATGATGGTCGTTATTCCATGTAAAACCTCTCGAATTGAACACGCGGAACGAAAATCAAGTTATCTTGTTTAGCTGCCTCAAAAGTGATGAGGAAAATAGTGAACAATTGAACAGCTTGTTCAAGCTGTGTTACTAAGTGGTTTGAGATTTTCCTTCCCAGAATTTTGTTGTCTGATTGGGTGGCTTAAAGAAGTTAGTTTAGGGAGTCCTCAATCCTCATGTTGTATAGAGTTATATGTGTATATTATATCAATCAATGGTTAACTACATTCTTTCTCCCC</genome_strand>
        <mrna_strand>GCAATCTTCAAACTCAGGCGATTGCCAGAGGGAAG..............................................................................................................................................................................................................................................................................................CTGAGTTTTGTGGATCTTGCTGACCCAGAAAGAGTTAAAAAGTCTGGCTCAGCTGGCAATCAATTAAAAGAAGCTCAAAGCATTAACAAGTCCCTGTCAGCACTTGGTGATGTTATAAGTGCATTATCTTCAGGAAATCAACACATTCCTTATCGAAATCACAAGCTAACCATGTTGATGAGCGACTCGTTAGGTGGAAATGCTAAAACCCTGATGTTTGTAAACATCTCTCCAGCAGAATCAAACTTGGATGAGACTCACAATTCCTTGAC...................................................................................................................................................GTATGCATCAAGAGTTCGTTCTATTGTAAATGATCCCAGCAAAAATGTTTCCTCTAAGGAAGTCGCTCGTTTAAAGAAGCTGGTCTCATATTGGAAGGAACAAGCTGGTAGAAAAGGAGATGATGAGGAATTGGAGGAAATCCAAGACGAACGACCATCTAAAGACAAGAATGATGGTCGTTATTCCATGTAAAACCTCTCGAATTGAACACGCGGAACGAAAATCAAGTTATCTTGTTTAGCTGCCTCAAAAGTGATGAGGAAAATAGTGAACAATTGAACAGCTTGTTCAAGCTGTGTTACTAAGTGGTTTGAGATTTTCCTTCCCAGAATTTTGTTGTCTGATTGGGTGGCTTAAAGAAGTTAGTTTAGGGAGTCCTCAATCCTCATGTTGTATAGAGTTATATGTGTATATTATATCAATCAATGGTTAACTACATTCTTTCTCCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U595368" ref_strand="+" ref_description="SGN-U595368 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>agcccaattttgtattataattatcaacaataattaggatttccaaatccaaaacaaagcaaaaaaaatttggggagaaaaaatggaattaacccttgattgatataatatacacatataactctatacaacatggggattgaggactccctaaactaacttttttaagccacccaatcagacaaaaaatttttgggaaggaaaatctcaaaccccttagtaacacaacttgaacaagctggtcaaatggtcactattttccccaccacttttgaggcaccgaaacaaaataacttgattttccttccgcgtgttcaattcgaaaggttttacctggaataacaaccatccttcttgtctttagatgggcgtccgacttggaattcctccaattcctcattatttcctttttcacccacttgttccttcca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0020J02.1" temp_strand="-" temp_description="C02SLm0020J02.1  AC226519.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0020J02 sequenced_by:kribb upload_account_name:korea">
        <position start="98420" stop="97390"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98120" g_stop="97690" g_length="431"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="431" r_length="431" r_score="0.914"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0020J02.1" gen_strand="-" ref_id="SGN-U595368" ref_strand="+">
        <total_alignment_score>0.914</total_alignment_score>
        <cumulative_length_of_scored_exons>431</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0020J02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U595368" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98120" e_stop="97690"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCCTAATTATGTATTATAATTATCAACAATAATTAGGATTTCCAAATCCAAAACAAAGCACAAAAAATTTGGGGAGAAAGAATGTAGTTAACCATTGATTGATATAATATACACATATAACTCTATACAACATGAGGATTGAGGACTCCCTAAACTAACTTCTTTAAGCCACCCAATCAGACAACAAAATTCTGGGAAGGAAAATCTCAAACCACTTAGTAACACAGCTTGAACAAGCTGTTCAATTGTTCACTATTTTCCTCATCACTTTTGAGGCAGCTAAACAAGATAACTTGATTTTCGTTCCGCGTGTTCAATTCGAGAGGTTTTACATGGAATAACGACCATCATTCTTGTCTTTAGATGGTCGTTCGTCTTGGATTTCCTCCAATTCCTCATCATCTCCTTTTCTACCAGCTTGTTCCTTCCA</genome_strand>
        <mrna_strand>AGCCCAATTTTGTATTATAATTATCAACAATAATTAGGATTTCCAAATCCAAAACAAAGCAAAAAAAATTTGGGGAGAAAAAATGGAATTAACCCTTGATTGATATAATATACACATATAACTCTATACAACATGGGGATTGAGGACTCCCTAAACTAACTTTTTTAAGCCACCCAATCAGACAAAAAATTTTTGGGAAGGAAAATCTCAAACCCCTTAGTAACACAACTTGAACAAGCTGGTCAAATGGTCACTATTTTCCCCACCACTTTTGAGGCACCGAAACAAAATAACTTGATTTTCCTTCCGCGTGTTCAATTCGAAAGGTTTTACCTGGAATAACAACCATCCTTCTTGTCTTTAGATGGGCGTCCGACTTGGAATTCCTCCAATTCCTCATTATTTCCTTTTTCACCCACTTGTTCCTTCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U564520" ref_strand="+" ref_description="SGN-U564520 Tomato 200607#2 [11 ESTs aligned] (*GB) gi|147781479|emb|CAN69444.1| (e_value=1e-114) hypothetical; (*ATH) AT1G14130.1 (e_value=6e-91)  Symbol: None | 2-oxoglutarate-dependent dioxygenase, putative, similar to adventitious rooting related oxygenase ARRO-1 from Malus x domestica, gi:3492806; contains Pfam domain PF03171, 2OG-Fe(II) oxygenase superfamily | chr1:4835721-4837588 REVERSE... ; (*SWP) sp|Q96330|FLS1_ARATH (e_value=8e-24) Flavonol synthase/flavanone 3-hydroxylase OS=Arabidopsis thaliana GN=FLS1; ">
      <seq>ccgctaataaactccaagttccaaaaaaaaaaatctaaggtaagcgcaagagcaaaaacacaaaatggagagtgaaaattcagtgccagtaattgatttagaggattttccaaggcaattatctaagttaatttgggcatgtgaagaatggggttgtttcagaattttgaaccatgataaaatccttccagtttcactcatggcagagatgaaggaagtggtgagggcattgtttgatcttccaactgaaatcaagaaacgcaacaaagatgtacttgtaggatctgggtacatggctcctagtgaaaaaaaccctctttatgaagcttttggtctctataatatgtcttgtcatgaagatttagatgagttttgtactcagttggatgcatctccacaccaaagagagacaattaagaagtatgctgcagcaattaatggactaatgatggacattctgcgaaagatgagtgaagggttgggactgccaaatgtttcttttgaggattggccttgtcagtttaggattaacaagtacaacttcacgccagaagttgtaggttcctctggggttcagatacacacagacttggcattccttactattctacaggatgatgaaagcgttggtggtcttgaggtaatgaagaagtctggtgaatttgtagcagttgatcgttggccaaacaccctccttgtgaatcttggagacataggcacggtatggagcaatggaagattacactctgtcaagcatagagtgatatgcaaggaagcaaaactacgggtatctattgcttcattcatcttgggaccaagggacacagcagtggaaccaccatctgagctggtagatgctgaacacccccgtatgtatgttcctttcactttcactgattatagaaagctccgttactcaacaaagttgcaggcaggggaaactcttgaacttatgcgtactaacttgtaaaactttggcaagcatctaagatcctccgttatattgatttacagaaatgatcttgaaagtaagaaagacaatatatcttagtgggatttcatcatctatatatcgtcaatgatctaagctaccatagcctattaaatggcagagcatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0020J02.1" temp_strand="+" temp_description="C02SLm0020J02.1  AC226519.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0020J02 sequenced_by:kribb upload_account_name:korea">
        <position start="101963" stop="111029"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102260" g_stop="102421" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="162" r_length="162" r_score="0.975"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="102422" i_stop="108514" i_length="6093">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.765" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108515" g_stop="108757" g_length="243"/>
          <reference_exon_boundary r_type="cDNA" r_start="163" r_stop="405" r_length="243" r_score="0.996"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108758" i_stop="109839" i_length="1082">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.394" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="109840" g_stop="110155" g_length="316"/>
          <reference_exon_boundary r_type="cDNA" r_start="406" r_stop="721" r_length="316" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="110156" i_stop="110332" i_length="177">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.933" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="110333" g_stop="110729" g_length="397"/>
          <reference_exon_boundary r_type="cDNA" r_start="722" r_stop="1118" r_length="397" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0020J02.1" gen_strand="+" ref_id="SGN-U564520" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>1118</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0020J02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U564520" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102260" e_stop="102421"/>
          <exon e_start="108515" e_stop="108757"/>
          <exon e_start="109840" e_stop="110155"/>
          <exon e_start="110333" e_stop="110729"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACAAATAAACTCCAAGTTCCAAAAAAAAAAATCTAAGGTAAGAGCAAGAGCAAAAACACAAAATGGAGAGTGAAAATTCAGTGCCAGTAATTGATTTAGAGGATTTTCCAAGGCAATTATCTAAGTTAATTTGGGCATGTGAAGAATGGGGTTGTTTCAGAATTTTGAACCATGATAAAATCCTTCCAGTTTCACTCATGGCAGAGATGAAGGAAGTGGTGAGGGCATTGTTTGATCTTCCAACTGAAATCAAGAAACGCAACAAAGATGTAATTGCAGGATCTGGGTATATGGCTCCTAGTGAAAGAAACCCTCTTTATGAAGCTTTGGGTCTCTATGATATGTCTTGTGTTGAAGATGTAGATGAGTTTTGTACTCAGTTGGATGCATCTCCACATCAAAGGTTTGATTTTTACTTTTTCAGTTTCTTGAAAATGAAAAAGTTGAGTTCTTTGTTTAGCTCATTGGTGTAACCTTTGATCAATTTGATACGTCAGTGACTTCTCTGTGTGGAATGTTGGAATAGGAAAATTTAGTAAATATAGAAAAAGATAATCTTTTTGGGGCAATCTGAAAAAGGGAAGTAAGACACTTGAATTGGGATGGAGGGAGTACTTTTTTTAGTTTCTTGATAATGGAAAGTTGAGTTCTTTGTGCATTGATAGTTGGTGGTGTTGGAGTTCTGTAAATGAAAAGTAGAGTTCATTTGTTGCTGATATCCTTGATGAATTAGCTATGTGAGTGACTTGCTGATGGGATCTGGAATTGATTTGTTCATATTTGGAGTAAGTTTGGTACTTAATTTTGATACAATAGTTGAAGGAACTTAAATGATCAGTGAAGCTAATAGACACTTGAGAGCTTTTGTTTCTCTTGTTTTTCCTCTTTTTCATAATTGTAATTTGTGTTAAAACAATAACACAAGTGGGGTTTGGGGAGGGTAGTGTGTACACAAACCTTACTGTTACTTTGGGAGGTAGAGGTTGTTTTCTATAGAACCCCGGCTCAAGAAAATAACAAGAGTGAAGAAACAAGGCAAAATACTAAACAAAGCATGACAAAACAATCTGTAACTACAACAAAAATAATGTGATAACCGAAGTACAAGGAACAATAAATAGTAATAGACTATCCAAAAGGAAGTGCTCCTTACAAGCTGTAGTGGCTTAATGAAGAAATTGATATCTGAACATAGTTTAAGAACAATTGGGGCATGTTTGGGTAAAGTGTAAACTATACTTACTTTTCGTGTTGAAGAAATCTGAAAAAACTTTTCTACTATAATGGTTAAAAAGCATTTTGATTGCTACTGTGAACAGAGAGACAATCAAGAAGTATGCTGCAGCAATTAATGGACTAATGATGGACATTCTGCGAAAGATGAGTGAAGGATTGGGACTGCGAAATGTTTCGTTTGAGGATTGGCCTTGTCAGTTTAGGATTAACAAGTACCACTTCACCCCAGAAGCTGTAGGTTCCTATGGGGTTCAGATACACACAGACTCAGGATTCCTTACTATTCTACAGGATGATGAATGCGTTGGTGGTCTCGAGGTCATGAAGAAGTCTGGTGAATTTGTAGCAGTTGATCCTTGGCCAAACACCCTCCTTGTGAATCTTGGAGACATAGGCACGGTAACTATACTGCTACTCTACCTAGTTCATTTTCAAGATTTGACGTGTTCCAACAATCTGATGCTAGCCTCTGGCAGAGTTTGTTTAGCAGGAAGTTAGATAATTCCTACTCCCTCACCCCTGGTAAGATAGAGAAAAAAGAACTAGACAATGATACTTTCCTTTTGCTATGTGAAGGTATGGAGCAATGGAAGACTATACTCCGCCAAGCATAGAGTGATATGCAAGGAAGCAAAACTACGAGTGTCTATTGCTTCATTCCTCTTGGGACCAAGGGACACGGCAGTGGAACCACCACCTGAGCTGGTAAATGCTGAACACCCCCGTATCTATGTTCCTTTCACTTTCAATGATTATAGGAAGCTCCGTTTATCGACAAAGTTGCAGGCAGGGGAAGCTCTTGATCTTATGCGAACTAACCTGTAAAACTTTGGAAAGCATCTCAGGTCCTCCGTTATATTGATTTACAGAAATGATCTTGAAAGTAAGAAAGATAATATATCTTAGTGGGATTTCATCATCTATATATCGTCATATGTGTGGTGGAGCAATAAAATCATATGTGCACACATCGAATTTTTAGATGGAAATTATTTGGTTCTTGATCCCGAACCAATTGTGATAGGAGAACCTTGTTGGCTTGATGCATACATGTTAAATAAACTCATCTGATACCAAATTTTATTTGAGAGATTCGTTCTCATAATCAATGGTCTAGCTATTATTGGAGGCAAATAATTTCTGCTAAACTCATTAGTATTATCAACATAATTTTATAGTTTGAAACTATGTTCTTAATTTAACAATTTGAGCGAACAACCTTAGAAAAATCAATTTGTAAGTTGATACAAATGCACACGTGGTCATACCATAGATGCATCTATTAAATCATAATAGTAAGTGGTCCACATGGCAGGTGAACAAACCCATATTCACCTTTTTATATATTCACCTTTTTATATGTTGCAAATAATTTCGGGGGATACAATTTCAACCTTACCTGGTACAACGATCATTTTATCATGAGAACAAGCGACACATGAGAATTCTTGAAGAATCCTTTATTTCTTGAACATATAAAAACATGAATTCTTAATTCTTTTACATTACATTTGAACTGAAATGGTCAACCAATTATACCAACTGATATTTATTCTAGTAAACTCCTAGTTTACTTTTGTATGTAATTCCATCATCATGCTCATATTTGTATACAAGAAATAACGAGAAAAAATGAGTAGTATTATACGTAAATAATTATAGCCTACTATGGTTGTAGTAATTTGAAAATATTAAATTTTCTCATAAGTTAAAGTATCAATATAAAAAAAAAATTCTTTTCAATTCTTTCGATAGTTAAAAAGTTTGTCTTGAGACTTGCTACAACCCCAATATTATGAGCAGTTTCATTCCTCCGAATAGTGACAAATTAGTCATTTCAAGACTCTTAATTAATTTTGTTTACTATCACAAATTTTACAAAGCCATTCTTTTATGGTGACCATCTCCTACAAGAAGAAAATTATTATTATTGTCATGATTAAAATCATCACATGCAAGACATACTACTAGACAACCAATGACAAATTTGTGTTGTCACACAACACTAGTTATTATCGTCATGACCACAAGTCCACAACCTTTATAGGAAAGTCTTTTGTCCTTCTATAACTTAACATACCACAATATCTGTCTAGTACTTGATCATAGATTTTTCAAATAATATTTGAGAGAAAATTTGGCAAACAGCGTTTGTCCATACAATTTGTCATTATTTCATAAATATTTTTGGCAAATATCCCAAATTTTCAAATACTAGTTTTTTCTAGTATTTGGGTTTGATCTCATTATTTGGGATCTCTTGAAAATTGAAATTTACACCAAACTTTTATCTTGTACAAAAACAACCTCTATAGTAGTTGTTTGCGTTGTATTACATAATTTTTTACGTAAACACCAAAATAGTGATGAAATATTCGGTGCATATTAAATGATGATATATGCTTTGTCTACTTTATGATATATGAAATGATGCTTGTCCAAAATGTCACATTGCTCTAGTGTCGTGGACACTTTGTTATTTATTGCAACGAAGATTCTTGAGTTGTAATACAAACTTATGGTTAGTTATAATAGTTTTTAAAACTTATGGGTATAAATTATATTTTTCTAAAACGTGAAATATATTTTTCAAATACTATGGCCAAACACATGGTCCCGAAATTTTCATCCAAATAATATTTGCCAAGAATATTTGGAAATCAATGATCAAACGCTAGCGTAAGCTTTATGTTAGTGATCATCACATCATCACTATAGTGCATTAAGACTTACACCCAATGTATTACCCATATAAAAACGTCTTTGGTCATAAATCAGTGGGATTTCAACTGAACTTCTTATTATCATGGTGCACCGGGATTTTAACTGTGTCTTGCCCAATTGATGCGGTGAAATTTGAATTCAACGTCTTACCCTCAACTAATGTCTTGATAAATCAAATACATTACCAAAAAAATAATTATCGAAAACTATAAATATAATCTGAATTTGACTTAAAGTACAAAAAAAAATGAACAAAATCAATTAATTAGAACAACATGTTGAAATCATATAAAAGTCCCAAATTGAAATAAGTTAATACCTTTTAAAATTTCTTGTCAATATTGTTACGAAGATTTACATAATTTACAAACCATTTTAAAATAACCACAAAACAAATTTTGTTAGTACAAATAATATATTAATTACTCAACAAGTAAATATTTAGATAAAGAAAAATAAAGAGGTGTAAAAGCAACCAATAATGATAATCCAATCAATATGTATCGATGTTAATTCAATCAATATGTATATGCCACGTAACTCAATAACTTATCTTTTAATAAAACAAGATCATAAAGAACAATTTCTTTTACAAATTATTAACTTAAAAAACTAATTTTACTTTTTAAATAAAAAAATGATTAAAACTGCTGGACTCATATAATTTTGAGATGGTAAGAAAAACTACTGATGCATAGTCCAACGTAAAATATAAAATAGATTATATAGTAATTTATCTTATTTTCGAGAGAAAAATAAACAATAATATTTTTACCTTCTTTATATATACTTTGCTTCAATTCTTTTATAGTTGAACAATATAACATATTATAAAATTAAAGCAAAATAAAAAAAGAAGTATAGAAGATGAAAATAATATAAATATAGAGATAAGATATGAGAGTATTTTTTATTTTTCACAGTACTCACTAAAATTTTTAATTATTCCTTTTCTATTACTTTCACAATTACAAATTAATTGAATAATTATTGAGATGTTTTTTGTTTTCTAAATTAATTTAATTGTTTAATTTTTAATATTGCTTTTAGAATGTCCTCTCAAATTTATCCTTCACTAGTTAGTTTATTAATTAATATTAAATTATTTTAATCATAAACATGATAATAATTAATAAGGATAAAAATAAAATGGAGGGAGTACCTTTAACTACAATTATTCTTAGTGATAACATATATTCAATAAAGAAAAATTACATCTTAAGACATTAATACGAATAAAATAATCAAGAATTTCCAAATTAATATTGTTTTAAAAGTAATCTATAAAAGAAACGTAACAAATAATTTGTATAAAATGAAATTGTTATAAACAATTTGTATTATAATGAATGTCTAATTATGTGGAGTCCTTGTAAGATATGGTTAAAAATTTACTTGGGGACCAAGTAAGGTTTTCCTGTAAATAAAGAATTTTCCTTCGTTGTAAATAAGATTGGTGAAAGATGTATGATAACTAAATATACTTCAAAAGAAATAAAAAGTTTTTTCTCTTCTCCCTATTTTCTTCTTCTTCTAAATTTATATAGTTTCATGACAGAAATGAATTACTCTATTTGTTTGGTTTTTGAGACAATCGTGCAGAAAGACCCAAGTTGTGTTCCTTCGACGCATCCAAATTCTTCATGTCTTTCGTTCATATTTATCTCAATTTACGTGACTATCAAAATATCAATTATAAATTTTAACAAAAAAATTTTTAATTACAATTTTAACAAATTTTTTTTTAATTTGATCAAAACGATAAAATAAATGTATTATTTTATTTTTTTAATATTTTATTCTTTTAAGTTTAACATCTTTCAATTAAAAAATAAAATAAATATCAATTTATTTTAAAACAAAAAAAATACTCTGGGTGAGAAAAGAATGACCTAGTTTGATTTGGAATCGAATTTAAGAGAAAAAAAAACTTTTTAATCTTGTGGTCATAAACTAAAGTTATGTCAAATGTACTAAAATATCCTTTAATCTTGTGATTTTAAACATGCCACGTGGAAAGTTAAAATTAAAGTATTGCAAACATTCTTTTTTAAATAAACTAAAAAAAAATAAAATATATTCATTTTAAAACAAAAAGAATAATTTTTCTGATCAGATTTTCTTACCTATTAACATTACATATAGAAACCGAAGTTCCAAAAAAAGAAGAAAAAAGTTAAGAGCAAAAACACAAAATGGAGAGTGAAAATTCAGTGCCAGTAATTGATTTAGATGATTTTCCAAGGCAATTGTCCAAGTTAATTTGGGCCTGTGAAGAATGGGGTTGTTTCAGAATTTTGAACCATGATAAAATCCTTCCAGTTTCACTCATGGCAGAGATGAAGGAAGTGGTGAGGGCATTGTTTTATCTTCCAACTGAAATCAAGAAACGCAACAAAGATGTACTTGTAGGATCTGGGTACATGGCTCCTAGTGAAAAAAACCCTCTTTATGAAGCTTTTGGTCTCTATAATATGTCTTGTCATGAAGATTTAGATGAGTTTTGTACTCAGTTGGATGCATCTCCACACCAAAGGTTCGATTTTTACTTTTTTAAGTTTCTTGAAAATGAATAAGTTGAGTTCATTGCTGTTTCCTTTGATCAATTAGCTATGTTCAGTGAAAAAATTAGTAGGTAAATATAGAAAAAGACAATCTTTTTGGTTTCTTGATGATGGAAAGTTTAGTTCTTTGTGCATTATAAGTTGTTTGATGAAGTTTTGAAATGAATAGTAGGATTCATTGTTGTTACCCTTGATCAATTAGCTTGTGACTTTTGTCATGTAGAGTGTCGAATTGGAAATTTACTAAGTGTAGAAAAAGACACTTTGTGGGACAGATAGGAAATGGAAAGTAAGACACTTGAATTGGGACAGAGGGAGTACTTATTTAGTGTTCTCGATAATGAAAAGTTGAGTTCTTTGTGCATCATTAATAGTTGGTATTGCTGTTTTGAAAATGAAAAGCAGGATTTATTTATTACGGATAATCCTTGATAAATTAGCTATGTCAGCGACTTGCTGGTGGGATCTGGAAGTGATTTGTTCGTATTGCTAGCAAATTTAGTACTTATGTTTAGCACAGTAGTTTAAGGAACTTCAATGATCAGTGAAGCTAATAATCACTTAATTTTCTCTTGTTTCTTACTTTAGTTTTTTTCATATTTGCAATATGAGTTAAACACCAACATACTCAGTTTAGTCCTGGGGTCTGGGGAAGTTAGTGTGTATGTAAACATTACCCTACTTTGGGAGGTTGATTCCGATAGACCCTCAGCTTAAGAAAATAAGAGTACTGAAGAAACAAGGCATGACCAAGCAATCTATAACTACAACAAAATAATTAGATTATTGAAGTACAAGGAATAATAAATAGTAACAGAAATCAAAGAAATAAGAAACTACAAGAGTAATACTACGACTATCCTAAAAGAAGTGCTTCTTACATGCTGGAGTGGCATCATAAAGAAATTAACAAGAAAAAGGAATCGGTATTTGGATATATTTTAAAAATTGTGGGAATCTTTGGGTAAATTATACTTACATTTCATATTGAAGAAATCTCAAAAGACTGCTCTCCAAGAATGCTTAATAGCAGTTTGATTGCTACTGTGAACAGAGAGACAATTAAGAAGTATGCTGCAGCAATTAATGGACTAATGATGGACATTCTGCGAAAGATGAGTGAAGGGTTGGGACTGCCAAATGTTTCTTTTGAGGATTGGCCTTGTCAGTTTAGGATTAACAAGTACAACTTCACGCCAGAAGTTGTAGGTTCCTCTGGGGTTCAGATACACACAGACTTGGCATTCCTTACTATTCTACAGGATGATGAAAGCGTTGGTGGTCTTGAGGTAATGAAGAAGTCTGGTGAATTTGTAGCAGTTGATCGTTGGCCAAACACCCTCCTTGTGAATCTTGGAGACATAGGCACGGTAACTATGCTGCTACTCTACCTAGTTCGTTTTCAAGATTTGACGTGTTCCAACAATCTGATGCCAGCCTCTGGCAGGGTTTGTTTAGCAGGAACTTAGATAATTCCTACTCCCTTACCCCTTGTAAAATTGAGATAAAAGAAGTAGACAGTGATACTTGCCTTTTGCAATGTGAAGGTATGGAGCAATGGAAGATTACACTCTGTCAAGCATAGAGTGATATGCAAGGAAGCAAAACTACGGGTATCTATTGCTTCATTCATCTTGGGACCAAGGGACACAGCAGTGGAACCACCATCTGAGCTGGTAGATGCTGAACACCCCCGTATGTATGTTCCTTTCACTTTCACTGATTATAGAAAGCTCCGTTACTCAACAAAGTTGCAGGCAGGGGAAACTCTTGAACTTATGCGTACTAACTTGTAAAACTTTGGCAAGCATCTAAGATCCTCCGTTATATTGATTTACAGAAATGATCTTGAAAGTAAGAAAGACAATATATCTTAGTGGGATTTCATCATCTATATATCGTCAATGATCTAAGCTACAATAGCCTATAAAATGGCAGAGCATT</genome_strand>
        <mrna_strand>CCGCTAATAAACTCCAAGTTCCAAAAAAAAAAATCTAAGGTAAGCGCAAGAGCAAAAACACAAAATGGAGAGTGAAAATTCAGTGCCAGTAATTGATTTAGAGGATTTTCCAAGGCAATTATCTAAGTTAATTTGGGCATGTGAAGAATGGGGTTGTTTCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTTTGAACCATGATAAAATCCTTCCAGTTTCACTCATGGCAGAGATGAAGGAAGTGGTGAGGGCATTGTTTGATCTTCCAACTGAAATCAAGAAACGCAACAAAGATGTACTTGTAGGATCTGGGTACATGGCTCCTAGTGAAAAAAACCCTCTTTATGAAGCTTTTGGTCTCTATAATATGTCTTGTCATGAAGATTTAGATGAGTTTTGTACTCAGTTGGATGCATCTCCACACCAAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGACAATTAAGAAGTATGCTGCAGCAATTAATGGACTAATGATGGACATTCTGCGAAAGATGAGTGAAGGGTTGGGACTGCCAAATGTTTCTTTTGAGGATTGGCCTTGTCAGTTTAGGATTAACAAGTACAACTTCACGCCAGAAGTTGTAGGTTCCTCTGGGGTTCAGATACACACAGACTTGGCATTCCTTACTATTCTACAGGATGATGAAAGCGTTGGTGGTCTTGAGGTAATGAAGAAGTCTGGTGAATTTGTAGCAGTTGATCGTTGGCCAAACACCCTCCTTGTGAATCTTGGAGACATAGGCACG.................................................................................................................................................................................GTATGGAGCAATGGAAGATTACACTCTGTCAAGCATAGAGTGATATGCAAGGAAGCAAAACTACGGGTATCTATTGCTTCATTCATCTTGGGACCAAGGGACACAGCAGTGGAACCACCATCTGAGCTGGTAGATGCTGAACACCCCCGTATGTATGTTCCTTTCACTTTCACTGATTATAGAAAGCTCCGTTACTCAACAAAGTTGCAGGCAGGGGAAACTCTTGAACTTATGCGTACTAACTTGTAAAACTTTGGCAAGCATCTAAGATCCTCCGTTATATTGATTTACAGAAATGATCTTGAAAGTAAGAAAGACAATATATCTTAGTGGGATTTCATCATCTATATATCGTCAATGATCTAAGCTACCATAGCCTATTAAATGGCAGAGCATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U564521" ref_strand="+" ref_description="SGN-U564521 Tomato 200607#2 [6 ESTs aligned] (*GB) gi|147781479|emb|CAN69444.1| (e_value=3e-54) hypothetical; (*ATH) AT1G14130.1 (e_value=1e-44)  Symbol: None | 2-oxoglutarate-dependent dioxygenase, putative, similar to adventitious rooting related oxygenase ARRO-1 from Malus x domestica, gi:3492806; contains Pfam domain PF03171, 2OG-Fe(II) oxygenase superfamily | chr1:4835721-4837588 REVERSE... ; (*SWP) sp|P54847|ACCO3_CUCME (e_value=7e-18) 1-aminocyclopropane-1-carboxylate oxidase 3 OS=Cucumis melo GN=ACO3; ">
      <seq>gagtgaaggattgggactgcgaaatgttttcgtttgaggattggccttgtcagtttaggattaaacaagtaccacttcacccccagaagctgtagtttcntatggggttcagatacacacagactcaggattccttactattctacaggatgatgaatgcgttggtggtctcgaggtcatgaagaagtctggtgaatttgtagcagttgatccttggccaaacaccctccttgtgaatcttggagacataggcacggtatggagcaatggaagactatactccgccaagcatagagtgatatgcaaggaagcaaaactacgagtgtctattgcttcattcctcttgggaccaagggacacggcagtggaaccaccacctgagctggtaaatgctgaacacccccgtatctatgttcctttcactttcaatgattataggaagctccgtttatcgacaaagttgcaggcaggggaagctcttgatcttatgcgaactaacctgtaaaactttggaaagcatctcaggtcctccgttatattgatttacagaaatgatcttgaaagtaagaaagataatatatcttagtgggatttcatcatctatatatcgtcatatgtgtggtggagcaataaaatcatatgtgcacacatcgaatttttagatggaaattatttggttcttgatcccgaaccaattgtgataggagaaccttgttggcttgatgcatacatgttaaataaactcatctgataccaaattttatttgagagattcgttctcataatcaatggtctagctattattggaggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0020J02.1" temp_strand="+" temp_description="C02SLm0020J02.1  AC226519.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0020J02 sequenced_by:kribb upload_account_name:korea">
        <position start="103344" stop="104928"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="103644" g_stop="103896" g_length="253"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="256" r_length="256" r_score="0.968"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="103897" i_stop="104073" i_length="177">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="104074" g_stop="104626" g_length="553"/>
          <reference_exon_boundary r_type="cDNA" r_start="257" r_stop="809" r_length="553" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0020J02.1" gen_strand="+" ref_id="SGN-U564521" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>806</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0020J02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U564521" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="103644" e_stop="103896"/>
          <exon e_start="104074" e_stop="104626"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGTGAAGGATTGGGACTGCGAAATG-TTTCGTTTGAGGATTGGCCTTGTCAGTTTAGGATT-AACAAGTACCACTTCACCCC-AGAAGCTGTAGGTTCCTATGGGGTTCAGATACACACAGACTCAGGATTCCTTACTATTCTACAGGATGATGAATGCGTTGGTGGTCTCGAGGTCATGAAGAAGTCTGGTGAATTTGTAGCAGTTGATCCTTGGCCAAACACCCTCCTTGTGAATCTTGGAGACATAGGCACGGTAACTATACTGCTACTCTACCTAGTTCATTTTCAAGATTTGACGTGTTCCAACAATCTGATGCTAGCCTCTGGCAGAGTTTGTTTAGCAGGAAGTTAGATAATTCCTACTCCCTCACCCCTGGTAAGATAGAGAAAAAAGAACTAGACAATGATACTTTCCTTTTGCTATGTGAAGGTATGGAGCAATGGAAGACTATACTCCGCCAAGCATAGAGTGATATGCAAGGAAGCAAAACTACGAGTGTCTATTGCTTCATTCCTCTTGGGACCAAGGGACACGGCAGTGGAACCACCACCTGAGCTGGTAAATGCTGAACACCCCCGTATCTATGTTCCTTTCACTTTCAATGATTATAGGAAGCTCCGTTTATCGACAAAGTTGCAGGCAGGGGAAGCTCTTGATCTTATGCGAACTAACCTGTAAAACTTTGGAAAGCATCTCAGGTCCTCCGTTATATTGATTTACAGAAATGATCTTGAAAGTAAGAAAGATAATATATCTTAGTGGGATTTCATCATCTATATATCGTCATATGTGTGGTGGAGCAATAAAATCATATGTGCACACATCGAATTTTTAGATGGAAATTATTTGGTTCTTGATCCCGAACCAATTGTGATAGGAGAACCTTGTTGGCTTGATGCATACATGTTAAATAAACTCATCTGATACCAAATTTTATTTGAGAGATTCGTTCTCATAATCAATGGTCTAGCTATTATTGGAG</genome_strand>
        <mrna_strand>GAGTGAAGGATTGGGACTGCGAAATGTTTTCGTTTGAGGATTGGCCTTGTCAGTTTAGGATTAAACAAGTACCACTTCACCCCCAGAAGCTGTAGTTTCNTATGGGGTTCAGATACACACAGACTCAGGATTCCTTACTATTCTACAGGATGATGAATGCGTTGGTGGTCTCGAGGTCATGAAGAAGTCTGGTGAATTTGTAGCAGTTGATCCTTGGCCAAACACCCTCCTTGTGAATCTTGGAGACATAGGCACG.................................................................................................................................................................................GTATGGAGCAATGGAAGACTATACTCCGCCAAGCATAGAGTGATATGCAAGGAAGCAAAACTACGAGTGTCTATTGCTTCATTCCTCTTGGGACCAAGGGACACGGCAGTGGAACCACCACCTGAGCTGGTAAATGCTGAACACCCCCGTATCTATGTTCCTTTCACTTTCAATGATTATAGGAAGCTCCGTTTATCGACAAAGTTGCAGGCAGGGGAAGCTCTTGATCTTATGCGAACTAACCTGTAAAACTTTGGAAAGCATCTCAGGTCCTCCGTTATATTGATTTACAGAAATGATCTTGAAAGTAAGAAAGATAATATATCTTAGTGGGATTTCATCATCTATATATCGTCATATGTGTGGTGGAGCAATAAAATCATATGTGCACACATCGAATTTTTAGATGGAAATTATTTGGTTCTTGATCCCGAACCAATTGTGATAGGAGAACCTTGTTGGCTTGATGCATACATGTTAAATAAACTCATCTGATACCAAATTTTATTTGAGAGATTCGTTCTCATAATCAATGGTCTAGCTATTATTGGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U570570" ref_strand="+" ref_description="SGN-U570570 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|5545339|dbj|BAA82556.1| (e_value=2e-77) lectin-like protein kinase [Populus nigra]; (*ATH) AT5G06740.1 (e_value=2e-40)  Symbol: None | lectin protein kinase family protein, contains Legume lectins beta-chain signature, PROSITE:PS00307 and Serine/Threonine protein kinases active-site signature, PROSITE:PS00108 | chr5:2084095-2086053 FORWARD | Aliases: MPH15.10, MPH15_... ; (*SWP) sp|Q9CAL2|CRK3_ARATH (e_value=2e-25) Cysteine-rich receptor-like protein kinase 3 OS=Arabidopsis thaliana GN=CRK3; ">
      <seq>gcgacctgaaggcgagtaacatcatgcttgactcaaagttcaatgcgcgccttggggactttggccttgcgcgagcacttgacaacgaaaggacctcgtatgctgaggcagaaggagtgcttggtacaatgggatacattgcaccagagtgtttccacacagggaaagccacacagcaatctgatgtgtacgcgtttggggcagtgttattggaagttgtatgtggccagagacctggaaccaagattaatggctttcaattctttgttgattgggtttggtacttgcaccgcgatggccgtatcttggaagctgttgatccaaggcttggagatgactatgttgctgatgaagcaaagaaacttttactacttggtttggcttgtgcacatcctatagctactgacaggcctaaaacacaggcaatagttcagattatatcagggtcagcaccagcaccagaagttccaccattcaagccagcatttgtgtggccatcaatggtgccaattgacatagactcaagtgttatggacacaacatccattactacttctcacttcaattcaggatggagtctagactatcaaagcagggagaccccaacatatgcagatcactctttggtgtagttacttgatggtaaacaactattaccaaaaggaaaattgatttttttggccttcaattttttaaaaatatttcctgtaattatgttttcctgggaggaggttaaaaatttccttcagtttttcactttttggaagatgttatttttcttcttccgaatttgttgagggagcatgatgaaaagatcaggcagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0020J02.1" temp_strand="-" temp_description="C02SLm0020J02.1  AC226519.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0020J02 sequenced_by:kribb upload_account_name:korea">
        <position start="112118" stop="110695"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="111818" g_stop="110995" g_length="824"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="824" r_length="824" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0020J02.1" gen_strand="-" ref_id="SGN-U570570" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>824</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0020J02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U570570" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="111818" e_stop="110995"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCGACCTGAAGGCGAGTAACATCATGCTTGACTCAAAGTTCAATGCGCGCCTTGGGGACTTTGGCCTTGCGCGAGCACTTGACAACGAAAGGACCTCGTATGCTGAGGCAGAAGGAGTGCTTGGTACAATGGGATACATTGCACCAGAGTGTTTCCACACAGGGAAAGCCACACAGCAATCTGATGTGTACGCGTTTGGGGCAGTGTTATTGGAAGTTGTATGTGGCCAGAGACCTGGAACCAAGATTAATGGCTTTCAATTCTTTGTTGATTGGGTTTGGTACTTGCACCGCGATGGCCGTATCTTGGAAGCTGTTGATCCAAGGCTTGGAGATGACTATGTTGCTGATGAAGCAAAGAAACTTTTACTACTTGGTTTGGCTTGTGCACATCCTATAGCTACTGACAGGCCTAAAACACAGGCAATAGTTCAGATTATATCAGGGTCAGCACCAGCACCAGAAGTTCCACCATTCAAGCCAGCATTTGTGTGGCCATCAATGGTGCCAATTGACATAGACTCAAGTGTTATGGACACAACATCCATTACTACTTCTCACTTCAATTCAGGATGGAGTCTAGACTATCAAAGCAGGGAGACCCCAACATATGCAGATCACTCTTTGGTGTAGTTACTTGATGGTAAACAACTATTACCAAAAGGAAAATTGATTTTTTTGGCCTTCAATTTTTTAAAAATATTTCCTGTAATTATGTTTTCCTGGGAGGAGGTTAAAAATTTCCTTCAGTTTTTCACTTTTTGTTTGATGTTATTTTTCTTCTTTTCAATTTGTTAATGGAGCATGATGAAAAGATCAGGCAGC</genome_strand>
        <mrna_strand>GCGACCTGAAGGCGAGTAACATCATGCTTGACTCAAAGTTCAATGCGCGCCTTGGGGACTTTGGCCTTGCGCGAGCACTTGACAACGAAAGGACCTCGTATGCTGAGGCAGAAGGAGTGCTTGGTACAATGGGATACATTGCACCAGAGTGTTTCCACACAGGGAAAGCCACACAGCAATCTGATGTGTACGCGTTTGGGGCAGTGTTATTGGAAGTTGTATGTGGCCAGAGACCTGGAACCAAGATTAATGGCTTTCAATTCTTTGTTGATTGGGTTTGGTACTTGCACCGCGATGGCCGTATCTTGGAAGCTGTTGATCCAAGGCTTGGAGATGACTATGTTGCTGATGAAGCAAAGAAACTTTTACTACTTGGTTTGGCTTGTGCACATCCTATAGCTACTGACAGGCCTAAAACACAGGCAATAGTTCAGATTATATCAGGGTCAGCACCAGCACCAGAAGTTCCACCATTCAAGCCAGCATTTGTGTGGCCATCAATGGTGCCAATTGACATAGACTCAAGTGTTATGGACACAACATCCATTACTACTTCTCACTTCAATTCAGGATGGAGTCTAGACTATCAAAGCAGGGAGACCCCAACATATGCAGATCACTCTTTGGTGTAGTTACTTGATGGTAAACAACTATTACCAAAAGGAAAATTGATTTTTTTGGCCTTCAATTTTTTAAAAATATTTCCTGTAATTATGTTTTCCTGGGAGGAGGTTAAAAATTTCCTTCAGTTTTTCACTTTTTGGAAGATGTTATTTTTCTTCTTCCGAATTTGTTGAGGGAGCATGATGAAAAGATCAGGCAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U565077" ref_strand="+" ref_description="SGN-U565077 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|157359769|emb|CAO68491.1| (e_value=3e-87) unnamed; (*ATH) AT3G55550.1 (e_value=2e-45)  Symbol: None | lectin protein kinase, putative, similar to receptor lectin kinase 3 (Arabidopsis thaliana) gi:4100060:gb:AAD00733; contains protein kinase domain, Pfam:PF00069; contains legume lectins alpha and beta domains, Pfam:PF00138 and Pfam:PF... ; (*SWP) sp|Q9M0X5|CRK25_ARATH (e_value=4e-28) Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25; ">
      <seq>cccatggtatagaactgctccntattggtgcaagattctataatgtttgggtacagtatgatggaatcaagaaagttcttgatgtttatattgttgaacaagcactgaaaaatgggtctaccccacctataccaaaaacccccattttaacatatgatcttgatttgaaagaacatgtaaatcaagaatcatattttgggttttctgcatcaactgggactaactaccaactcaactgcgtattgagatggaacttaacagttgagtatttccctgaaaagaaaaatccttggttgaagattgttttaggtgttgggattcctgtagtgtctcttttgattcttggcgcggcgtgtttagggtattgttatcataagaaaaggattgataggtcacagtctaacatattgggtgcactcaagagtttgcctggaactccacaagagtttcagttcaaggctttgaagaaagctacaaacaattttgatgaaaagaataagcttgggcaaggaggatatggagttgtttacagaggatttttagctggtgaggagaacaaagatattgctgtcaaatggttttctagggaaagcatcaaagggcaagatgatttcttggctgagcttactattatcaatcgtcttcgacataaacatcttgtcaaattgcttggatggtgtcacaagaatggaaagctactgcttgtatatgaatacatgcctaatggcagtctagatatgcacctctttgcgggcccagataaagagccgctgagctggcacgtccgctacaagattgtgcaaggtgtggcctcagcattacattatctgca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0020J02.1" temp_strand="-" temp_description="C02SLm0020J02.1  AC226519.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0020J02 sequenced_by:kribb upload_account_name:korea">
        <position start="114926" stop="111548"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="114626" g_stop="113955" g_length="672"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="672" r_length="672" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="113954" i_stop="112008" i_length="1947">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.917" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="112007" g_stop="111848" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="673" r_stop="832" r_length="160" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0020J02.1" gen_strand="-" ref_id="SGN-U565077" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>832</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0020J02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U565077" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="114626" e_stop="113955"/>
          <exon e_start="112007" e_stop="111848"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCATGGTATAGAACTTGCTCC-TATTGGTGCAAGATTCTATAATGTTTGGGTACAGTATGATGGAATCAAGAAAGTTCTTGATGTTTATATTGTTGAACAAGCACTGAAAAATGGGTCTACCCCACCTATACCAAAAACCCCCATTTTAACATATGATCTTGATTTGAAAGAACATGTAAATCAAGAATCATATTTTGGGTTTTCTGCATCAACTGGGACTAACTACCAACTCAACTGCGTATTGAGATGGAACTTAACAGTTGAGTATTTCCCTGAAAAGAAAAATCCTTGGTTGAAGATTGTTTTAGGTGTTGGGATTCCTGTAGTGTCTCTTTTGATTCTTGGCGCGGCGTGTTTAGGGTATTGTTATCATAAGAAAAGGATTGATAGGTCACAGTCTAACATATTGGGTGCACTCAAGAGTTTGCCTGGAACTCCACAAGAGTTTCAGTTCAAGGCTTTGAAGAAAGCTACAAACAATTTTGATGAAAAGAATAAGCTTGGGCAAGGAGGATATGGAGTTGTTTACAGAGGATTTTTAGCTGGTGAGGAGAACAAAGATATTGCTGTCAAATGGTTTTCTAGGGAAAGCATCAAAGGGCAAGATGATTTCTTGGCTGAGCTTACTATTATCAATCGTCTTCGACATAAACATCTTGTCAAATTGCTTGGTAAGTGTTCTTAGTTTTTCTTCAAACATAGATTTTGTGCATTTGTTTGAGTAGAGTATTAGAGTTATATTGTGCATGTTTTGTTTATGATCTTTAATAACGTTAGGGAAATGGTACTGATAACTGATAAAGTTGATGTCATGTGATCCAAAGTTATTAAGACTCTTGTGATCCAATCTTTCTCAGTATAACTACAAGTTTTGAGTCTCAAATAAGGCCTTATCTCCAATATTTCAATTGAAAATTAAACAAATAGGGTAAAGATTAGTTTTTTTTGAGTATGTACATGAAATATGTGAATAACCTTTAAGGCAAAGGAAGTTTCAAATGTAGGGTAAATTTTGCTCAAAATTAGTTGCATTTTCTTGAATTCAGCAATCAGAAATAGAAATTGTCCTCTTATGTTTTTTGATTCTCAATGAAAGAGAGAATTTATTACCAGGATTCATTGATGTGACTTGAAATAATGGTGCCAAAAACCTTGTAAAAGTTGCTGACAATTTAAAGCCAAAGATTGGTGGGACATCAAATTTAATACTCCTTTTGTTTCAATTTATATGGCTTTTTTTCTTCTTTCTTTTTTTATTATAAAAAAGAATGATTTTTTACCTTTTTTATTTCAAACTCCATCTTTTCAACTTTATACGTAATATGTTTAAGAGACTAATATTATAGAATATTTTGTATTTGACATATTTTTTTACTTTAAAATCATAAAAATCTAAAATTCTCTTTATATCTTAAACTTCGTGTAAATCGACATATAAATTGAAACGGAAGGAATTTATGTGATCTGTTTTTCAGACTCTCCAGCAGTGTTGTTGCACATGCATTGGATTCTTTTTAGAAAAAAATACTTTTTTTTTAAGGATCTGATATGTATTCATCGACATTTTTAGAGAGTGAGCAACACTATTACAATAGACTCATTAAATGCATGAGGACATGCCCTTATCTTTTTATGCTTTTCTTTTCCTAGTAACTACTAGTAAGTGATCCATGATCTTACATGCTTCTTCAACTAATTTGTGTAATTTTGGCATGGTACTAGTCTTTCTAGTCTGACATTTAGCATGCTAGGAATTTACTAAGTTGGATCATCTTCTGACAAGCAAATTTCCTCTTTTGAAGAATCAAAGTTTTCTTGAACATTTATAATAACTTGGTCCTCCTTTTTGTCTTCAATCTCCTTTTCCATTCTTAGAATTCTCAAGTCATCCCAAGGATTTGTCTAAGTTTTTGTTACCTGACTAACTAGATTTGCGTCGCATAGGGTCTATCAAAGTGAGAAACACAATATATCAAGAGTGTCTCCAATTTTTTTTAATGTTTGAAGTCGAAACCTCTAGTTAATGAACCACACTCTACTACAGTAAATGTTTTAATAGTTGATGGTACGTAAGAGTTCAAGCCAAAAATATCAAGGAAGTTAGAAAAACTAATGGAATGCCTTAAAAGTTTTGACCAAGAACCAACTTGTTGCTATGGTCCCTCCAATTTAGAAGAACAAGGCACTATCTTGAAGTGCTTCATTTTGATTTGCTTAAAAGAAGATGATCATCCTTTGTTGACCATGGAATAAAGCAGCCATTCGTCAAAGTTCAATACAATTTTTTTATGTCAAAATTTTGTGAAGCTTCCTTCTTGTCCTAACATCCCTTTCATTCATTGTCAATGATTAACACAAGTTTTGGATGTTAGTTGAATGATGATAAATTAAATCCAATGAAAAGGACATTAATTCTGTATTTTAGTATACATTCATATCTTCAAACACCTAATCTTTGTGTCACCTACTCTTGTCATCTGGCCCTACAAAGAGATAAGGTTTGTAAAATACAACAAAAAGTTGACAATTTGGGTAGTGTGCAACTTCTGTATCTAGTTATTTTTACTGATTAAAAAACAAACATAAGCATCTTACAAGATTGCATGTTATGGTGACAGGATGGTGTCACAAGAATGGAAAGCTACTGCTTGTATATGAATACATGCCTAATGGCAGTCTAGATATGCACCTCTTTGCGGGCCCAGATAAAGAGCCGCTGAGCTGGCACGTCCGCTACAAGATTGTGCAAGGTGTGGCCTCAGCATTACATTATCTGCA</genome_strand>
        <mrna_strand>CCCATGGTATAGAAC-TGCTCCNTATTGGTGCAAGATTCTATAATGTTTGGGTACAGTATGATGGAATCAAGAAAGTTCTTGATGTTTATATTGTTGAACAAGCACTGAAAAATGGGTCTACCCCACCTATACCAAAAACCCCCATTTTAACATATGATCTTGATTTGAAAGAACATGTAAATCAAGAATCATATTTTGGGTTTTCTGCATCAACTGGGACTAACTACCAACTCAACTGCGTATTGAGATGGAACTTAACAGTTGAGTATTTCCCTGAAAAGAAAAATCCTTGGTTGAAGATTGTTTTAGGTGTTGGGATTCCTGTAGTGTCTCTTTTGATTCTTGGCGCGGCGTGTTTAGGGTATTGTTATCATAAGAAAAGGATTGATAGGTCACAGTCTAACATATTGGGTGCACTCAAGAGTTTGCCTGGAACTCCACAAGAGTTTCAGTTCAAGGCTTTGAAGAAAGCTACAAACAATTTTGATGAAAAGAATAAGCTTGGGCAAGGAGGATATGGAGTTGTTTACAGAGGATTTTTAGCTGGTGAGGAGAACAAAGATATTGCTGTCAAATGGTTTTCTAGGGAAAGCATCAAAGGGCAAGATGATTTCTTGGCTGAGCTTACTATTATCAATCGTCTTCGACATAAACATCTTGTCAAATTGCTTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGTGTCACAAGAATGGAAAGCTACTGCTTGTATATGAATACATGCCTAATGGCAGTCTAGATATGCACCTCTTTGCGGGCCCAGATAAAGAGCCGCTGAGCTGGCACGTCCGCTACAAGATTGTGCAAGGTGTGGCCTCAGCATTACATTATCTGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U596257" ref_strand="+" ref_description="SGN-U596257 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>ccaaaaacccccattttaacatatgatcttgtttctaatgaacatgttaatcaagaatcatattttggggttgctggattaactgggactaactaccaactcaactgcgcattgagatggaacttaacagttgagtatttccctgaaaagaaaaatacttgtgttgaagattgttttacgtgtcgggattcct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0020J02.1" temp_strand="-" temp_description="C02SLm0020J02.1  AC226519.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0020J02 sequenced_by:kribb upload_account_name:korea">
        <position start="114795" stop="114004"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="114495" g_stop="114304" g_length="192"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="193" r_length="193" r_score="0.922"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0020J02.1" gen_strand="-" ref_id="SGN-U596257" ref_strand="+">
        <total_alignment_score>0.922</total_alignment_score>
        <cumulative_length_of_scored_exons>192</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0020J02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U596257" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="114495" e_stop="114304"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAAAAACCCCCATTTTAACATATGATCTTGATTTGAAAGAACATGTAAATCAAGAATCATATTTTGGGTTTTCTGCATCAACTGGGACTAACTACCAACTCAACTGCGTATTGAGATGGAACTTAACAGTTGAGTATTTCCCTGAAAAGAAAAATCCTTG-GTTGAAGATTGTTTTAGGTGTTGGGATTCCT</genome_strand>
        <mrna_strand>CCAAAAACCCCCATTTTAACATATGATCTTGTTTCTAATGAACATGTTAATCAAGAATCATATTTTGGGGTTGCTGGATTAACTGGGACTAACTACCAACTCAACTGCGCATTGAGATGGAACTTAACAGTTGAGTATTTCCCTGAAAAGAAAAATACTTGTGTTGAAGATTGTTTTACGTGTCGGGATTCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U563791" ref_strand="+" ref_description="SGN-U563791 Tomato 200607#2 [5 ESTs aligned] (*GB) gi|5545339|dbj|BAA82556.1| (e_value=4e-47) lectin-like protein kinase [Populus nigra]; (*ATH) AT5G06740.1 (e_value=2e-19)  Symbol: None | lectin protein kinase family protein, contains Legume lectins beta-chain signature, PROSITE:PS00307 and Serine/Threonine protein kinases active-site signature, PROSITE:PS00108 | chr5:2084095-2086053 FORWARD | Aliases: MPH15.10, MPH15_... ; (*SWP) sp|P16270|LECN_PEA (e_value=2e-16) Non-seed lectin OS=Pisum sativum; ">
      <seq>acgaaagagtgtgagactaagccaaaaacctattcaaacttctttaacaaaaaatgtctctaattatttgagtagtatatctcattttcttcactcattgatcaattattttatttgtatctacaaaaaagcaagagaaactcaacgtgcttcaaagtttctgctcattgattttttcttcttcccctgttttcttgtccatcaccaaatctacttcctctgtaagccaagaagaaactcactgctgatgaaaaatggggttgttaacaccaacaacactcaccattttcatcatgctcttctctttacttcaactcaagcttcaagctcagaaaatggaacatctcaacttaaaatatgcatcttttgatgaaactttctttgacatctttgaagttgaaaagcctgcaacaattagtaacgctgctcttcaagtaacccctgattctgcttcttcagatttcaatcgctacaataactcaggaagaatcctctttaagcaaccatttaagctctgggatggtgatgttttcgacaatacaacaagggttgcatctttcaactcttcttttcttgtcaatatttacagaccaaataatgaaacagctgccgaagggttagcattcttgatttcaccagatttggagaagccagataatagccagggccagtatttagggttaacaaatggttctacagatgggatttctagtaacaaagttgttgctgttgagcttgatacttctaaacaaagctttgaccctgatganaatcatataggtattgatgttcatagtgntanatctgtaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0020J02.1" temp_strand="-" temp_description="C02SLm0020J02.1  AC226519.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0020J02 sequenced_by:kribb upload_account_name:korea">
        <position start="115754" stop="114344"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="115454" g_stop="114644" g_length="811"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="811" r_length="811" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0020J02.1" gen_strand="-" ref_id="SGN-U563791" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>811</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0020J02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U563791" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="115454" e_stop="114644"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGAAAGAGTGTGAGACTAAGCCAAAAACCTATTCAAACTTCTTTAACAAAAAATGTCTCTAATTATTTGAGTAGTATATCTCATTTTCTTCACTCATTGATCAATTATTTTATTTGTATCTACAAAAAAGCAAGAGAAACTCAACGTGCTTCAAAGTTTCTGCTCATTGATTTTTTCTTCTTCCCCTGTTTTCTTGTCCATCACCAAATCTACTTCCTCTGTAAGCCAAGAAGAAACTCACTGCTGATGAAAAATGGGGTTGTTAACACCAACAACACTCACCATTTTCATCATGCTCTTCTCTTTACTTCAACTCAAGCTTCAAGCTCAGAAAATGGAACATCTCAACTTAAAATATGCATCTTTTGATGAAACTTTCTTTGACATCTTTGAAGTTGAAAAGCCTGCAACAATTAGTAACGCTGCTCTTCAAGTAACCCCTGATTCTGCTTCTTCAGATTTCAATCGCTACAATAACTCAGGAAGAATCCTCTTTAAGCAACCATTTAAGCTCTGGGATGGTGATGTTTTCGACAATACAACAAGGGTTGCATCTTTCAACTCTTCTTTTCTTGTCAATATTTACAGACCAAATAATGAAACAGCTGCCGAAGGGTTAGCATTCTTGATTTCACCAGATTTGGAGAAGCCAGATAATAGCCAGGGCCAGTATTTAGGGTTAACAAATGGTTCTACAGATGGGATTTCTAGTAACAAAGTTGTTGCTGTTGAGCTTGATACTTCTAAACAAAGCTTTGACCCTGATGATAATCATATAGGTATTGATGTTCATAGTGTTAGATCTGTAAA</genome_strand>
        <mrna_strand>ACGAAAGAGTGTGAGACTAAGCCAAAAACCTATTCAAACTTCTTTAACAAAAAATGTCTCTAATTATTTGAGTAGTATATCTCATTTTCTTCACTCATTGATCAATTATTTTATTTGTATCTACAAAAAAGCAAGAGAAACTCAACGTGCTTCAAAGTTTCTGCTCATTGATTTTTTCTTCTTCCCCTGTTTTCTTGTCCATCACCAAATCTACTTCCTCTGTAAGCCAAGAAGAAACTCACTGCTGATGAAAAATGGGGTTGTTAACACCAACAACACTCACCATTTTCATCATGCTCTTCTCTTTACTTCAACTCAAGCTTCAAGCTCAGAAAATGGAACATCTCAACTTAAAATATGCATCTTTTGATGAAACTTTCTTTGACATCTTTGAAGTTGAAAAGCCTGCAACAATTAGTAACGCTGCTCTTCAAGTAACCCCTGATTCTGCTTCTTCAGATTTCAATCGCTACAATAACTCAGGAAGAATCCTCTTTAAGCAACCATTTAAGCTCTGGGATGGTGATGTTTTCGACAATACAACAAGGGTTGCATCTTTCAACTCTTCTTTTCTTGTCAATATTTACAGACCAAATAATGAAACAGCTGCCGAAGGGTTAGCATTCTTGATTTCACCAGATTTGGAGAAGCCAGATAATAGCCAGGGCCAGTATTTAGGGTTAACAAATGGTTCTACAGATGGGATTTCTAGTAACAAAGTTGTTGCTGTTGAGCTTGATACTTCTAAACAAAGCTTTGACCCTGATGANAATCATATAGGTATTGATGTTCATAGTGNTANATCTGTAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U584833" ref_strand="+" ref_description="SGN-U584833 Tomato 200607#2 [5 ESTs aligned] (*GB) gi|118483980|gb|ABK93877.1| (e_value=2e-13) unknown; ">
      <seq>accggattaaccctggtggtagctcgtccaaaatcggaatttggaggacagcaaaaagcccgttcttctttgctgtaaagctcagagaagttgcctccgccgatttgcacagagaattcagccgccaaattgacagccgttcaattttgccggtaaattttggggcaagaaaaggagatcaattttagagatatgcaagaccagagaggacttgaggaagcttcagctcctaaaatgcggaaaaagaaaacatcacaaccgaaggctacagtattgcaaaaagaagggaataaggcaaaaaggatacaagatgtgcatgcaatgccaattcaaaatgggttaaaacacaccaagagagtcccaccaaacgaagtttccccattattccaatatgctgagaaatcaacacctgaattctcgccagatacttccacttctggaaaagaatatcgggcattaaggagaaagtatctattgctggaagaagaaagttttggtcttaataaagaattgagagaaaccgatgatgagatcaaggcccttgaagacgagaagctaacactccttgatgatcttgttgtgttagaaggcctggttgatccttcagatattcaatcccaaggccagcgattatgatggtttatttataatgtgttttttcggtaaactggggatatatacagaattgtgtacaataatccaacttctgttagcataaagttgagattgtaacgatgccattatataacatcgactngattgtttattgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0020J02.1" temp_strand="+" temp_description="C02SLm0020J02.1  AC226519.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0020J02 sequenced_by:kribb upload_account_name:korea">
        <position start="126825" stop="131187"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="127125" g_stop="127301" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="177" r_length="177" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="127302" i_stop="130296" i_length="2995">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="130297" g_stop="130887" g_length="591"/>
          <reference_exon_boundary r_type="cDNA" r_start="178" r_stop="770" r_length="593" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0020J02.1" gen_strand="+" ref_id="SGN-U584833" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>768</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0020J02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U584833" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="127125" e_stop="127301"/>
          <exon e_start="130297" e_stop="130887"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCGGATTAACCCTGGTGGTAGCTCGTCCAAAATCGGAATTTGGAGGACAGCAAAAAGCCCGTTCTTCTTTGCTGTAAAGCTCAGAGAAGTTGCCTCCGCCGATTTGCACAGAGAATTCAGCCGCCAAATTGACAGCCGTTCAATTTTGCCGGTAAATTTTGGGGCAAGAAAAGGAGGTGATTTTTATAATCTAGGTCTAATTGCTTAATGTTAAAATCATAAATATTCTATTACTGATGTGTTCATAGGTCCAGGGTTTATTTACGCAGTTGAATTTCATCTTCTTCGTTTACTATAATTTAAGAGGATTATTATTAGAGTTTGAACTCGATTTAGCTTTATGAAGTCTGAAAGATTTCATCTTTTTCCCCATTCAATGAATATGACTATGACTTGATGATTTAGCTATTGTTAATCAGGAATTTGTTAGGTTGCCTTTTTCCTAAGTCCAATTTATGTTACTCTGGTTTCGAGTTTTGCCTGGATATGGAGGGCAAGAAGGAACACTAGTCTGCTGTGTTTTGATTATCCTGGTAAAATATGATAAGCATCTGCTAAGCTTCCCAGATTAGGGATGAATTGGTTAAGGATTATTATAAAGGTTTTCTAATTTAATATATTTGTGATGAATAAGCGTGTTTTAGAAACGTTTGTGTCAAAGTAATGATGGCTATTGGAGGAAGAAGATTGATTGCTAATGTTTTCTTCAAAAAAAATGGAGAGAAATTACTTAAATAGCGGCAATGGTTCTTCCATACAAAAGAATGGATGTATCATGTGTGAAATGTATTCTTAATTAGAATACATGTATTCGGTGCTTGTGTTGTTCCAACTCTTCAGATATATAACTATTGGGGTTTAAATTTTCTAAGGGCCCGTTTGGATGGGCTTAATAAAAGCAGCTTTAAAAAAGTACTTTTAAAAGTGCTGAAACTTATTTTTAAAATAAGCAGTTATGCGTTTGGATAAAAGTGCTGAAGTTGTTATGTCAAACGTGAAAAAGGGAAAAATGGAAGAGAGAAATGTTAGGGTTATATGGGTAATTTGGAGATTGTATAAAAATATTAAGCACAAAAAGATAAAAATGTGGTCAACTTAAAACAGCTTATAAGCTAAAAAAAAAGCACCCCTACCCCAGCTTTTAACTTTTGGCTTAAAATAAGTTTTTTTTAACTTAAAATAAGCTGTTTTGAGTATTGCCAAACAGCTAAATAAGTCAAAAACCAGCTTTTAAGTCAGTTTGACCAGCTTTTAAGCTGAGCCAAACAAGCTCTAAGTCTCTGTCTAGCTTCGAAACCTTAGAGTTCAATTCCTTTTTTTTTTCTTTTGAGGACAAGGGAAATCCGCAGCCGCTACCCTTTGGGTGCGCACTGGGTAAAATCCCGCTCCTATTCAATAGCTCGCAAACCACAGAGGTAACCCGCACTAGATAAGCCTGGTGCGACGAGCTCGACCCAGAAGGAAAACCCCTTGCTTTCGCTGGTAAGGGGTTTCGAACTTGAGACCTCCAACATGGAGGTCCCAAGCTCAAACCACTGGGCCACCCCGAAGGGTAACCAAGCTCAATTCCTTTTTGGTTTTTGATTTTTGTAATCTGGAGTCATTCAAGGCTAAGTTTGCACAAAAAAATTGAAGTCGTTTCTTTGAAATGTTTGCTGTTCAGACTGTGAAATGTTTTCTTAGATTTGTTAAATTTGAGTAGAGAGCTTGTGAAAAGGACAATGTCTTTGGAGGAGATTTCCTTGTAAAATGACCATTCAATTTCGTTAATCCCCCACTAGACTCTAGAGACAGTTTGGTCAAAGATTGACTTTAACTTGCAGTGTTGTTAATGTAGGCTCATTCAATTTGGAACTTTGAAGCCTTCAAGTCTGGCATTGTAAGCAATTCTAGTCTTTGGATTGACAAATGAATTTTCCTTGCTCAACTTTGAGAATACTAAAACCTGTGTCTATTGTAGTTTGACTTTGAATGCAGAACATTGACTTTCTTATCACGAAGATTTCACTGAAATTACTGATGGAAAGGATCTAATTGAAACATCCCTCCATTATTGACTCAATACTTATTTACTCAAATCATAATAGGTCATTGTTTTTAAGTAAACAAAGGGATATATCTGTTAAATTTCGAAGGATATTAGTTGCTTGGACGTAGGAATCATATGACTTTGTGGATGTTTTAGTAAGAAACTGTGGTAACCTATGGAACCTATCTTCTTTTCTACATCCAATCCCCTAAATATGATAATAGTGGTGTGAAATATCAACTCTAATGACTTACAAATTTACTTGTAATTCTTTTGTCCTATGTTCTTCTGGTTATGTTAGGAGACTTATTGTTTGGCTGGGCATCATAAGGCCCATCATTTTGATGGTCATACATTAAGTGTTATTCTTTGAGTCTAAAGTCAAAACTGCCAATACCAGCCAAAATTGATGATAAGATATTCTTGTTAGAAAAAAAGCCTCAAAAACAGTCACCTTGGTATAGTGCTCTCATCTTGAATTAGAGTATAATGTAATCGTTTTGCTTAATTAGAACTGTAAAATGTATGGAGAAGGTAGAACAAATGAAGGTCAAAGCTTTTGACAAGGACAGAGATTCTTCACCATGACCCTCTATCCAGTCTTTCAAATCGTTTTATAGAATGGGAAAAAACTGATGTTTTTGGTGTCCAATTTAGTTTAAAATAAATTATGTGCCATGCTATGTCGGTGCTCTGTATATTGAGTTGTCTGGAACAGTATTCTCTATATTATTCAGTGGGTTCTTGTTGATAGAACTCATCTTTTCCCTCTATATTTTCCTTGAGAGTGTTAAGAAATTGATAATGTTGGTAAGTGGTTTTCATGTTACCTGGGACTCATACTTTACAGTAGTAATCTGACGTTTTTATTAATTCCTGAGTGGATCCTCTCCCGCTGCCCCACCAACACCCCAAAGATATTGTGGATGATGATCAGAACATAATGGGATATTACCTTGGACTGCATGCATGAATTACCAATTATCTTTTCAGGGTTCTTTAGTTTTTATGTGTGAGATTGGTGAGAAAGATTGCATAAGTTAGAATCTAGAAGTTGGATTCTATTATTCTTGTGGATTATACAACTGTAGCTTTCTTTCAGACTCCAGCCTTTTGATATCAATAGCTGTTTATCCTTGTAGATCAATTTTAGAGATATGCAAGACCAGAGAGGACTTGAGGAAGCTTCAGCTCCTAAAATGCGGAAAAAGAAAACATCACAACCGAAGGCTACAGTATTGCAAAAAGAAGGGAATAAGGCAAAAAGGATACAAGATGTGCATGCAATGCCAATTCAAAATGGGTTAAAACACACCAAGAGAGTCCCACCAAACGAAGTTTCCCCATTATTCCAATATGCTGAGAAATCAACACCTGAATTCTCGCCAGATACTTCCACTTCTGGAAAAGAATATCGGGCATTAAGGAGAAAGTATCTATTGCTGGAAGAAGAAAGTTTTGGTCTTAATAAAGAATTGAGAGAAACCGATGATGAGATCAAGGCCCTTGAAGACGAGAAGCTAACACTCCTTGATGATCTTGTTGTGTTAGAAGGCCTGGTTGATCCTTCAGATATTCAATCCCAAGGCCAGCGATTATGATGGTTTATTTATAATGTGTTTTTTCGGTAAACTGGGGATATATACAGAATTGTGTACAATAATCCAACTTCTGTTAGCATAAAGTTGAGATTGTAACGATG-CATTATATAACATCGACT-GATTGTTTATTGC</genome_strand>
        <mrna_strand>ACCGGATTAACCCTGGTGGTAGCTCGTCCAAAATCGGAATTTGGAGGACAGCAAAAAGCCCGTTCTTCTTTGCTGTAAAGCTCAGAGAAGTTGCCTCCGCCGATTTGCACAGAGAATTCAGCCGCCAAATTGACAGCCGTTCAATTTTGCCGGTAAATTTTGGGGCAAGAAAAGGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAATTTTAGAGATATGCAAGACCAGAGAGGACTTGAGGAAGCTTCAGCTCCTAAAATGCGGAAAAAGAAAACATCACAACCGAAGGCTACAGTATTGCAAAAAGAAGGGAATAAGGCAAAAAGGATACAAGATGTGCATGCAATGCCAATTCAAAATGGGTTAAAACACACCAAGAGAGTCCCACCAAACGAAGTTTCCCCATTATTCCAATATGCTGAGAAATCAACACCTGAATTCTCGCCAGATACTTCCACTTCTGGAAAAGAATATCGGGCATTAAGGAGAAAGTATCTATTGCTGGAAGAAGAAAGTTTTGGTCTTAATAAAGAATTGAGAGAAACCGATGATGAGATCAAGGCCCTTGAAGACGAGAAGCTAACACTCCTTGATGATCTTGTTGTGTTAGAAGGCCTGGTTGATCCTTCAGATATTCAATCCCAAGGCCAGCGATTATGATGGTTTATTTATAATGTGTTTTTTCGGTAAACTGGGGATATATACAGAATTGTGTACAATAATCCAACTTCTGTTAGCATAAAGTTGAGATTGTAACGATGCCATTATATAACATCGACTNGATTGTTTATTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U566126" ref_strand="+" ref_description="SGN-U566126 Tomato 200607#2 [13 ESTs aligned] (*GB) gi|27529828|dbj|BAC53929.1| (e_value=0) serine protease-like protein [Nicotiana tabacum]; (*ATH) AT4G34980.1 (e_value=3e-141) | Symbol: None | subtilase family protein, similar to SBT1, a subtilase from tomato plants GI:1771160 from (Lycopersicon esculentum) | chr4:16656696-16659344 REVERSE | Aliases: M4E13.40, M4E13_40; (*SWP) sp|O65351|SUBL_ARATH (e_value=5e-69) Subtilisin-like protease OS=Arabidopsis thaliana GN=ARA12; ">
      <seq>gggaatttggcctgagtctccaagttttagggacacccacatgcctccagtgcctgctggatggaaaggacaatgccaatcaggggaagcattcaatgcctcaatatgcaacaggaaaataattggggcaagatattatatgagtggctatgcagctgaagaagatgaaaagatcatgttcaagtctgccagggacagttctggtcatggaagtcatacagcttcaactgctgctgggcgttatgtagctgatatgaattacaaaggtttggcatctggaggagccagaggtggtgccccaatggccaggatagcagtgtacaaaacctgctggagttctggttgctatgatgttgatttgttggctgcatttgatgatgcaattagagatggggttcatgtcatttctatatctttgggcccagatgctccccaaggagattattttagtgatgcaatttctgtggggtcatttcatgctgttagccgtgggatacttgtagtggcctccgttggaaatgaaggaacctctggttcagccacaaatttagctccttggatgatcacagttgcagccagttcaaccgatagagattttacatctgatgttttactaggaaatagagttcaactcacgggtgaaagtcttagcttatctcaaatgcatacatctgcaaaaatcatacctgcttctgaagcttatgctggatacttcactccttatcaatccaggtgaagcagaagttattgcttagatagttctttgaatagaactaaggccaaagggaaggttcttgtgtgtcgacatgctggaagctcaagtgagtcaaagctggagaaaagcaatatagttaaacaagctggtggagttgggatgatccttattgatgaagcagacaagggtgtggctattcccttctccattccagcagcaactgttgggcaaaagattggaaaaaagatcctagcttacattaataatacacggttcacttctttgttagtggctgttgatatttgtttttattgttctttgatgttgttagcaatcatctcatctcttttatatttacagcctccctactgcaagaattctctctgctaaaactgttttgggagctcaacctgctcctcgagtaacagcattttcttcaagaggtcctaattctctaacaccagaaattttgaagcctgatattactgctcccggtttaaatatcctggcagcatggtccccagcaatgtctaggttgaagttcaacatactctctggaacctccatggcttgccctcacatatcaggagttgttgccttgttaaaagccgtgcatccatcatggtctccctctgcaatcaaatcagccatcatgacaacagccaaactatcagatatgcatcacaaacccataatagtagatcctgaagggaagaaggctaatccatttgattttggttctggatttgttaaccccacgaaagtcctcaatcctggtctgatatatgatgcacaaccagaagattacagagcatttctttgttcaattggttatgacgagaaatctctgcatctaattacaagggacaacagaacgtgtgatcaaacctttgcatcgccaaatgaactaaattatccctccatcacagtaccaaacctcagaaacaattactcagtatctcgaactgtcacaaatgtgggaaagtcaaggagtacttacaaggcagttatatttgcaccaaagggtatcaatgttactgtggtgccgcgaagattagccttcactagatattaccagaagatgaatttcacagtgactttcaaagtggctgcacctacacagggatatgtctttgggtccttgtcatggaggaacaaaagaacatgggtaacatctccacttgttgtcagagcacattccaatatgggtactgtggtatagttcagctgcagtgcctatttatttgtgttatagacaggtaagtaacaagatattgcaaccagtagctgctgaaaatggttgcatgaagaagccaacacaaaattcttagaagaatacatgtaattagtagcagaatacaaataattagtaattctttattctatttgtcctttagttttgagttttggttcttgctacctagtcaggttttactaatagggatactgcaaattcttttacttgtctagtaattgcattatgtattggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0020J02.1" temp_strand="-" temp_description="C02SLm0020J02.1  AC226519.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0020J02 sequenced_by:kribb upload_account_name:korea">
        <position start="134261" stop="130753"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="133962" g_stop="133849" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="114" r_length="114" r_score="0.991"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="133848" i_stop="133764" i_length="85">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="133763" g_stop="133241" g_length="523"/>
          <reference_exon_boundary r_type="cDNA" r_start="115" r_stop="637" r_length="523" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="133240" i_stop="133161" i_length="80">
            <donor d_prob="0.904" d_score="1.00"/>
            <acceptor a_prob="0.766" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="133160" g_stop="133054" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="638" r_stop="744" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="133053" i_stop="132972" i_length="82">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="132971" g_stop="132526" g_length="446"/>
          <reference_exon_boundary r_type="cDNA" r_start="745" r_stop="1190" r_length="446" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="132525" i_stop="132278" i_length="248">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="132277" g_stop="132091" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="1191" r_stop="1377" r_length="187" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="132090" i_stop="131882" i_length="209">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="131881" g_stop="131053" g_length="829"/>
          <reference_exon_boundary r_type="cDNA" r_start="1378" r_stop="2205" r_length="828" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0020J02.1" gen_strand="-" ref_id="SGN-U566126" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>2206</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0020J02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U566126" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="133962" e_stop="133849"/>
          <exon e_start="133763" e_stop="133241"/>
          <exon e_start="133160" e_stop="133054"/>
          <exon e_start="132971" e_stop="132526"/>
          <exon e_start="132277" e_stop="132091"/>
          <exon e_start="131881" e_stop="131053"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGAATTTGGCCTGAGTCTCCAAGTTTTAGGGACACCCACATGCCTCCAGTGCCTGCTGGATGGAAAGGACAATGCCAATCAGGGGAAGCATTCAATGCCTCAATATGCAACAGGTTTCTTTTAATTATCAACCATTTCTTGCAGTTTAATGTATTGTTTTATAGATGACAAGTCTAATAAGAATTTTGTCTTGTATAGGAAAATAATTGGGGCAAGATATTATATGAGTGGCTATGCAGCTGAAGAAGATGAAAAGATCATGTTCAAGTCTGCCAGGGACAGTTCTGGTCATGGAAGTCATACAGCTTCAACTGCTGCTGGGCGTTATGTAGCTGATATGAATTACAAAGGTTTGGCATCTGGAGGAGCCAGAGGTGGTGCCCCAATGGCCAGGATAGCAGTGTACAAAACCTGCTGGAGTTCTGGTTGCTATGATGTTGATTTGTTGGCTGCATTTGATGATGCAATTAGAGATGGGGTTCATGTCATTTCTATATCTTTGGGCCCAGATGCTCCCCAAGGAGATTATTTTAGTGATGCAATTTCTGTGGGGTCATTTCATGCTGTTAGCCGTGGGATACTTGTAGTGGCCTCCGTTGGAAATGAAGGAACCTCTGGTTCAGCCACAAATTTAGCTCCTTGGATGATCACAGTTGCAGCCAGTTCAACCGATAGAGATTTTACATCTGATGTTTTACTAGGAAATAGAGTTCAACTCACGGTAATCCCACTTTTCGAATAGTTCATATGTGAAGTTATATCCAGTTTCTATCTCCTCATTATGTTCTGGATATTTGGAAGGGTGAAAGTCTTAGCTTATCTCAAATGCATACATCTGCAAAAATCATACCTGCTTCTGAAGCTTATGCTGGATACTTCACTCCTTATCAATCCAGGTGAAGCAGAAGGTACTTAACTGTTTGTTAATTGTAGATATGTATGCATTGACAATTATATTAAAGTACTTTTCGTTCCTATCTTTTCCACTAGTTATTGCTTAGATAGTTCTTTGAATAGAACTAAGGCCAAAGGGAAGGTTCTTGTGTGTCGACATGCTGGAAGCTCAAGTGAGTCAAAGCTGGAGAAAAGCAATATAGTTAAACAAGCTGGTGGAGTTGGGATGATCCTTATTGATGAAGCAGACAAGGGTGTGGCTATTCCCTTCTCCATTCCAGCAGCAACTGTTGGGCAAAAGATTGGAAAAAAGATCCTAGCTTACATTAATAATACACGGTTCACTTCTTTGTTAGTGGCTGTTGATATTTGTTTTTATTGTTCTTTGATGTTGTTAGCAATCATCTCATCTCTTTTATATTTACAGCCTCCCTACTGCAAGAATTCTCTCTGCTAAAACTGTTTTGGGAGCTCAACCTGCTCCTCGAGTAACAGCATTTTCTTCAAGAGGTCCTAATTCTCTAACACCAGAAATTTTGAAGGTAATTTATTTGCTTAAAATAGTACCGAATTAAAAGTCTTTCAACTGCTCCTTTGTTTTCTACATCGATCCCTCTTTGCATTTATCATTTAGACCAACAAAGTCTTATGTTGCATCCTGAGATTTCCTTCCAGGATCTTCAATGTGGTTTTAGATTCTTTCTTTTAACTTTGCATCTCTTTGTTCCTACTTTATATGAGGATTTACTTTTTTTCTTGCAAGTAATATACCTGCTGATTTTCCTTGTAGCCTGATATTACTGCTCCCGGTTTAAATATCCTGGCAGCATGGTCCCCAGCAATGTCTAGGTTGAAGTTCAACATACTCTCTGGAACCTCCATGGCTTGCCCTCACATATCAGGAGTTGTTGCCTTGTTAAAAGCCGTGCATCCATCATGGTCTCCCTCTGCAATCAAATCAGCCATCATGACAACAGGTAAACTAGATGCCTTACATAGTCTAACTATGCAACTCTTGATTCTGAGGTTTGCTTTAAAGAAGGAAAAGGGTGAGGGGATCAAGATTTGGTTTTGTTTGAGCATATTATCTTAAAAATACTTATGGTTTTATTTGAGCATTGTATGTTAATGTATAAAGTGAATTTAACTATTACAGAATAATCTAATGTCATGAATGTTAATGCAGCCAAACTATCAGATATGCATCACAAACCCATAATAGTAGATCCTGAAGGGAAGAAGGCTAATCCATTTGATTTTGGTTCTGGATTTGTTAACCCCACGAAAGTCCTCAATCCTGGTCTGATATATGATGCACAACCAGAAGATTACAGAGCATTTCTTTGTTCAATTGGTTATGACGAGAAATCTCTGCATCTAATTACAAGGGACAACAGAACGTGTGATCAAACCTTTGCATCGCCAAATGAACTAAATTATCCCTCCATCACAGTACCAAACCTCAGAAACAATTACTCAGTATCTCGAACTGTCACAAATGTGGGAAAGTCAAGGAGTACTTACAAGGCAGTTATATTTGCACCAAAGGGTATCAATGTTACTGTGGTGCCGCGAAGATTAGCCTTCACTAGATATTACCAGAAGATGAATTTCACAGTGACTTTCAAAGTGGCTGCACCTACACAGGGATATGTCTTTGGGTCCTTGTCATGGAGGAACAAAAGAACATGGGTAACATCTCCACTTGTTGTCAGAGTGGCACATTCCAATATGGGTACTGTGGTATAGTTCAGCTGCAGTG-CTATTTATTTGTGTTATATA-AGGTAAGTAACAAGATATTGCAACCAGTAGCTGCTGAAAATGGTTGCATGAAGAAGCCAACACAAAATTCTTAGAAGAATACATGTAATTAGTAGCAGAATACAAATAATTAGTAATTCTTTATTCTATTTGTCCTTTAGTTTTGAGTTTTGGTTCTTGCTACCTAGTCAGGTTTTACTAATAGGGATACTGCAAATTCTTTTACTTGTCTAGTAATTGCATTATGTATTGGC</genome_strand>
        <mrna_strand>GGGAATTTGGCCTGAGTCTCCAAGTTTTAGGGACACCCACATGCCTCCAGTGCCTGCTGGATGGAAAGGACAATGCCAATCAGGGGAAGCATTCAATGCCTCAATATGCAACAG.....................................................................................GAAAATAATTGGGGCAAGATATTATATGAGTGGCTATGCAGCTGAAGAAGATGAAAAGATCATGTTCAAGTCTGCCAGGGACAGTTCTGGTCATGGAAGTCATACAGCTTCAACTGCTGCTGGGCGTTATGTAGCTGATATGAATTACAAAGGTTTGGCATCTGGAGGAGCCAGAGGTGGTGCCCCAATGGCCAGGATAGCAGTGTACAAAACCTGCTGGAGTTCTGGTTGCTATGATGTTGATTTGTTGGCTGCATTTGATGATGCAATTAGAGATGGGGTTCATGTCATTTCTATATCTTTGGGCCCAGATGCTCCCCAAGGAGATTATTTTAGTGATGCAATTTCTGTGGGGTCATTTCATGCTGTTAGCCGTGGGATACTTGTAGTGGCCTCCGTTGGAAATGAAGGAACCTCTGGTTCAGCCACAAATTTAGCTCCTTGGATGATCACAGTTGCAGCCAGTTCAACCGATAGAGATTTTACATCTGATGTTTTACTAGGAAATAGAGTTCAACTCACG................................................................................GGTGAAAGTCTTAGCTTATCTCAAATGCATACATCTGCAAAAATCATACCTGCTTCTGAAGCTTATGCTGGATACTTCACTCCTTATCAATCCAGGTGAAGCAGAAG..................................................................................TTATTGCTTAGATAGTTCTTTGAATAGAACTAAGGCCAAAGGGAAGGTTCTTGTGTGTCGACATGCTGGAAGCTCAAGTGAGTCAAAGCTGGAGAAAAGCAATATAGTTAAACAAGCTGGTGGAGTTGGGATGATCCTTATTGATGAAGCAGACAAGGGTGTGGCTATTCCCTTCTCCATTCCAGCAGCAACTGTTGGGCAAAAGATTGGAAAAAAGATCCTAGCTTACATTAATAATACACGGTTCACTTCTTTGTTAGTGGCTGTTGATATTTGTTTTTATTGTTCTTTGATGTTGTTAGCAATCATCTCATCTCTTTTATATTTACAGCCTCCCTACTGCAAGAATTCTCTCTGCTAAAACTGTTTTGGGAGCTCAACCTGCTCCTCGAGTAACAGCATTTTCTTCAAGAGGTCCTAATTCTCTAACACCAGAAATTTTGAAG........................................................................................................................................................................................................................................................CCTGATATTACTGCTCCCGGTTTAAATATCCTGGCAGCATGGTCCCCAGCAATGTCTAGGTTGAAGTTCAACATACTCTCTGGAACCTCCATGGCTTGCCCTCACATATCAGGAGTTGTTGCCTTGTTAAAAGCCGTGCATCCATCATGGTCTCCCTCTGCAATCAAATCAGCCATCATGACAACAG.................................................................................................................................................................................................................CCAAACTATCAGATATGCATCACAAACCCATAATAGTAGATCCTGAAGGGAAGAAGGCTAATCCATTTGATTTTGGTTCTGGATTTGTTAACCCCACGAAAGTCCTCAATCCTGGTCTGATATATGATGCACAACCAGAAGATTACAGAGCATTTCTTTGTTCAATTGGTTATGACGAGAAATCTCTGCATCTAATTACAAGGGACAACAGAACGTGTGATCAAACCTTTGCATCGCCAAATGAACTAAATTATCCCTCCATCACAGTACCAAACCTCAGAAACAATTACTCAGTATCTCGAACTGTCACAAATGTGGGAAAGTCAAGGAGTACTTACAAGGCAGTTATATTTGCACCAAAGGGTATCAATGTTACTGTGGTGCCGCGAAGATTAGCCTTCACTAGATATTACCAGAAGATGAATTTCACAGTGACTTTCAAAGTGGCTGCACCTACACAGGGATATGTCTTTGGGTCCTTGTCATGGAGGAACAAAAGAACATGGGTAACATCTCCACTTGTTGTCAGA---GCACATTCCAATATGGGTACTGTGGTATAGTTCAGCTGCAGTGCCTATTTATTTGTGTTATAGACAGGTAAGTAACAAGATATTGCAACCAGTAGCTGCTGAAAATGGTTGCATGAAGAAGCCAACACAAAATTCTTAGAAGAATACATGTAATTAGTAGCAGAATACAAATAATTAGTAATTCTTTATTCTATTTGTCCTTTAGTTTTGAGTTTTGGTTCTTGCTACCTAGTCAGGTTTTACTAATAGGGATACTGCAAATTCTTTTACTTGTCTAGTAATTGCATTATGTATTGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U566125" ref_strand="+" ref_description="SGN-U566125 Tomato 200607#2 [6 ESTs aligned] (*GB) gi|27529828|dbj|BAC53929.1| (e_value=3e-101) serine protease-like protein [Nicotiana tabacum]; (*ATH) AT4G10520.1 (e_value=5e-45) | Symbol: None | subtilase family protein, contains similarity to subtilase; SP1 GI:9957714 from (Oryza sativa) | chr4:6499790-6502862 FORWARD | Aliases: F7L13.100, F7L13_100; (*SWP) sp|Q39547|CUCM1_CUCME (e_value=3e-31) Cucumisin OS=Cucumis melo; ">
      <seq>tctcgtatccattttcttttgtctaaacaatcgcgaaaaaaaggatttaagagatcgaatatgattatatgaaatatctcttaattttatccgacgcagtacgtcaatggaaatatattatgtctactactattacacagtatacctgtgactgaataatctctttctctttctctctccctctcctctttattttcaaatcattctctctctctgtgtgtcttgttctgctataaaaaacctcatctttttttgttttcatcttgtagttgataatacattcttttactagccttatacatcaagataggagatgggtgtttcaaaaaagactctttttttactatttgttagtgtttttcttggagaaattagtctctgctcttctaccaagttatatgtggtgtacatgggaagcaaagatagtgatgagcatcaagatgagattttgaggcaaaaccatcaaatgcttactgatattcatggaggaaatgttgaacaagccaagagttctcatgtatacagttatagacatggttttaaaggctttgcagccaagttgactgagaaacaggcttctgaaatatctaaaatgcctggtgtggtatctgtatttccaaatactaagagaaacctgcatacaactcattcatgggattttatggggctcagtgaagatgaaacaatggaaatcccaggtttttccaccaagaaccaagttaatgtaatcattggtttcattgatacaggaatttggcctgagtctccaagttttagggacacccacatgcctccngtgcctgctggatggaaaggacaatgccaatcaggggaagcattcaatgcctcaatatgcaacaggaaaataattggggcaagatattatatgagtggctatgcagctgaanaanatgaaaagatcatgttcaagtctgccngnnnagttctggncatggnngtcatacagcttcanntgctgctgggcgttatgtagct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0020J02.1" temp_strand="-" temp_description="C02SLm0020J02.1  AC226519.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0020J02 sequenced_by:kribb upload_account_name:korea">
        <position start="135842" stop="133328"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="135542" g_stop="135150" g_length="393"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="394" r_length="394" r_score="0.977"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="135149" i_stop="135060" i_length="90">
            <donor d_prob="0.267" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="135059" g_stop="134962" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="395" r_stop="492" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="134961" i_stop="134866" i_length="96">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.932" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="134865" g_stop="134768" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="493" r_stop="590" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="134767" i_stop="134677" i_length="91">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="134676" g_stop="134518" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="591" r_stop="749" r_length="159" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="134517" i_stop="133961" i_length="557">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.850" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="133960" g_stop="133849" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="750" r_stop="861" r_length="112" r_score="0.991"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="133848" i_stop="133764" i_length="85">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="133763" g_stop="133628" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="862" r_stop="996" r_length="135" r_score="0.912"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0020J02.1" gen_strand="-" ref_id="SGN-U566125" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>996</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0020J02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U566125" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="135542" e_stop="135150"/>
          <exon e_start="135059" e_stop="134962"/>
          <exon e_start="134865" e_stop="134768"/>
          <exon e_start="134676" e_stop="134518"/>
          <exon e_start="133960" e_stop="133849"/>
          <exon e_start="133763" e_stop="133628"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCACGTTTCCATTTTCTTTTGTCTAAGCAATCGCGAAAAAAATTATTTAAGAGATCGAATATGATTATATGAAATATCTCTTAATTTTATCCGACGCAGTACGTTAATGGAAATATATTTTGTCTACTACTATTACACAGTATACCTGTGACTGAATAATCTCTTTCTCTTTCTCTCTCCCTCTCCTCTTTATTTTCAAATCATTCTCTCTCTCTGTGTGTCTTGTTCTGCTATAAAAAACCTCATCTTTTTTT-TTTTCATCTTGTAGTTGATAATACATTCTTTTACTAGCCTTATACATCAAGATAGGAGATGGGTGTTTCAAAAAAGACTCTTTTTTTACTATTTGTTAGTGTTTTTCTTGGAGAAATTAGTCTCTGCTCTTCTACCAAGGTAAATTTGGCTCTGTGTGAACTATGGGGACATATGGGGTTTTCTTTGAATGATGAATAGTTAGTAAAGTTGTGTTTTTTCTGTGTTTAGTTATATGTGGTGTACATGGGAAGCAAAGATAGTGATGAGCATCAAGATGAGATTTTGAGGCAAAACCATCAAATGCTTACTGATATTCATGGAGGAAAGTAAGTTGTTGGTACTTTTAGCTATGAGTTTGTTTTCCCCCTTTTTGTCTGTTTTTGGCAAAAATAAAAAACTGAAGTGGTTAATAATCTTTACAGTGTTGAACAAGCCAAGAGTTCTCATGTATACAGTTATAGACATGGTTTTAAAGGCTTTGCAGCCAAGTTGACTGAGAAACAGGCTTCTGAAATATCTAGTGAGTCTTTTACCTAATGTTTTATGTTACTGTTGATTACCTAATTTGATGGTTTGTACTCAGTCCACTGTTTGATGTTGAAACAAAACAGAAATGCCTGGTGTGGTATCTGTATTTCCAAATACTAAGAGAAACCTGCATACAACTCATTCATGGGATTTTATGGGGCTCAGTGAAGATGAAACAATGGAAATCCCAGGTTTTTCCACCAAGAACCAAGTTAATGTAATCATTGGTTTCATTGATACAGGTGATCATTTCTCTGTTCAACTAGCTCAAAGTTGTCTTAATTGCTGCAATCTTGTTCCAGTTAGGTGAAAGATATGATTGTTTAGGTGATCGATGGCACAAACAAAGTCGGTCCCTTCACTGATTGTGTTGTCACGTAATCACTAGTTACTTTTCTTAAGAAGAGTACAATAACATGACTCTGAAAAAGTGCTGAGTTTGTCATTTAGGTACATATGGTTGAACCTGGGGAAAGTAGTTCCTTTAGTACGTTGTTCCCTTTTCATCTCTGTAGGCATGTAGGATAAGTTTTACTGCGCATCAATCAATTCTTGTTTCAATCATTTGAGAATGATGGGATATGTTTGCTTAGATTTTCTTTAGCCCAAGTTTATTCAATTTTTCAACTTCCCAGTTTCTTCTTTGCATTTGTTGTACTGCTTGTGAATGTAAATAGAGTAAAGTCATCTCTCTGTTCATAACCTTATCAGTTTATCATTAGCCTGGTCCCCAGCTTCCTTGTTTTTTTCGAACTAATTAGATTTTGAGGTTAAGATCTTGAGACATTTACTGAAACAGGAATTTGGCCTGAGTCTCCAAGTTTTAGGGACACCCACATGCCTCCAGTGCCTGCTGGATGGAAAGGACAATGCCAATCAGGGGAAGCATTCAATGCCTCAATATGCAACAGGTTTCTTTTAATTATCAACCATTTCTTGCAGTTTAATGTATTGTTTTATAGATGACAAGTCTAATAAGAATTTTGTCTTGTATAGGAAAATAATTGGGGCAAGATATTATATGAGTGGCTATGCAGCTGAAGAAGATGAAAAGATCATGTTCAAGTCTGCCAGGGACAGTTCTGGTCATGGAAGTCATACAGCTTCAACTGCTGCTGGGCGTTATGTAGCT</genome_strand>
        <mrna_strand>TCTCGTATCCATTTTCTTTTGTCTAAACAATCGCGAAAAAAAGGATTTAAGAGATCGAATATGATTATATGAAATATCTCTTAATTTTATCCGACGCAGTACGTCAATGGAAATATATTATGTCTACTACTATTACACAGTATACCTGTGACTGAATAATCTCTTTCTCTTTCTCTCTCCCTCTCCTCTTTATTTTCAAATCATTCTCTCTCTCTGTGTGTCTTGTTCTGCTATAAAAAACCTCATCTTTTTTTGTTTTCATCTTGTAGTTGATAATACATTCTTTTACTAGCCTTATACATCAAGATAGGAGATGGGTGTTTCAAAAAAGACTCTTTTTTTACTATTTGTTAGTGTTTTTCTTGGAGAAATTAGTCTCTGCTCTTCTACCAAG..........................................................................................TTATATGTGGTGTACATGGGAAGCAAAGATAGTGATGAGCATCAAGATGAGATTTTGAGGCAAAACCATCAAATGCTTACTGATATTCATGGAGGAAA................................................................................................TGTTGAACAAGCCAAGAGTTCTCATGTATACAGTTATAGACATGGTTTTAAAGGCTTTGCAGCCAAGTTGACTGAGAAACAGGCTTCTGAAATATCTA...........................................................................................AAATGCCTGGTGTGGTATCTGTATTTCCAAATACTAAGAGAAACCTGCATACAACTCATTCATGGGATTTTATGGGGCTCAGTGAAGATGAAACAATGGAAATCCCAGGTTTTTCCACCAAGAACCAAGTTAATGTAATCATTGGTTTCATTGATACAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATTTGGCCTGAGTCTCCAAGTTTTAGGGACACCCACATGCCTCCNGTGCCTGCTGGATGGAAAGGACAATGCCAATCAGGGGAAGCATTCAATGCCTCAATATGCAACAG.....................................................................................GAAAATAATTGGGGCAAGATATTATATGAGTGGCTATGCAGCTGAANAANATGAAAAGATCATGTTCAAGTCTGCC-NGNNNAGTTCTGGNCATGGNNGTCATACAGCTTCANNTGCTGCTGGGCGTTATGTAGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U586244" ref_strand="+" ref_description="SGN-U586244 Tomato 200607#2 [9 ESTs aligned] (*GB) gi|118484433|gb|ABK94093.1| (e_value=5e-46) unknown; (*ATH) AT3G51510.1 (e_value=7e-45) | Symbol: None | expressed protein | chr3:19120041-19121030 FORWARD | Aliases: F26O13.150; ">
      <seq>gagtgaacctctttatctcttattcacaattgattgccatattccaccatgaaaatatacagtgcaaaaaacatcaacaaaaatggtggcattagcttcttcatctctctgcaattccccttcttcaattatccattcctcaaaaacatctatacccaatttcattacattctcttccttaagttattacaagaaaaggggaaaatcgcttgcaagtcgtagccttggaattgttgctgctactgaaggttctgttaacaaatctagtggaaaagatgaggaaaaacaagaagacccatcagttcctacatgggctaaacccggtacggatgagcctccaccatgggctagaaatgaagcacagaaagattcttcaagcattcaagttccattcgttgtttatttgcttgcttctgctgtcacagcaattgcagcgattggttctattttcgagtacacgaatcagaaacctgtgtttggagttttgggttcagatagtgttttttatgctccattgcttgggttctttgtgttcactggcattcccacttctgcattcctttggttcaaatcagtacaagttgctaacaaggaggctgaggaacaagaccgcagggatggatatatgtaacatctaatatgcaatctttaggtgatatctgcagcatcttatatgcatttttcagatgttgttgatggttgtttcctaaaatactatcatcgcaaatgaatactttctcgaggtttgttctttctagagcagcatgagtgtaaaaattgtcttctcaataccagttattccgctttatcaattctaaaagtctttaatcaccagatttgactatttccatctctcatttgaaaaaatagtttatcgatttgtggttagacaagttacttgctgatcttttggcacaacttgtgtaagttatccaccaatctggtgttgcttcttaactcttaacatatcgaccttggtaaatcactaattctctatcttgtccctcactaccaagacttaggagcttgaggctttggttcacaacgtatttactaataagttgtaataaatagtcaaaagaatattcaaataggtcctgtgagttaaatacatagcataacttacaagttcagtctactctcattttgatggtatatcagcacttattccttcctcttatttattaagtgaacgaaaaaagttcacactctaatagcatcatagcatgtattgtctgcttgccttcacatgtctttttggtttcaagtgtttgtacctaagaaaccagcaagtcatttgtttcttggaattgagtagtgatatctgcagaatggtttgatactacattctacatgttgtatttcatttctttgaaataggatcgatatagttcttaatctgaagactatctctaaagtatgcttatattgctttagtttactgtttctcatttttgtagtatctgcctgagaatttcttgaaaaactgatcgcgagctagtaaaaaaaaatgttcagtcgttccacaacattctctctccttcctcgttgtgctatcacacagaactctgaattttgcagtctacttcctttgagcttttcaactctctggggcggtgaagttcatccatttctccaagagaagagaaaagatagggaagcaacatcatatgaagtcatgtgaacacaacttttgtccctgtagggaggacaattgtatttttccctcagaaatgaactttaatatagaaatatgtcatgggcatttcgaatcagaaaggaacttcaatatagaaatatgtcatgggcatttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0020J02.1" temp_strand="+" temp_description="C02SLm0020J02.1  AC226519.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0020J02 sequenced_by:kribb upload_account_name:korea">
        <position start="145685" stop="149132"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="145985" g_stop="146420" g_length="436"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="436" r_length="436" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="146421" i_stop="146519" i_length="99">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.954" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="146520" g_stop="146636" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="437" r_stop="553" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="146637" i_stop="147571" i_length="935">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.695" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="147572" g_stop="148832" g_length="1261"/>
          <reference_exon_boundary r_type="cDNA" r_start="554" r_stop="1814" r_length="1261" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0020J02.1" gen_strand="+" ref_id="SGN-U586244" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1814</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0020J02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U586244" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="145985" e_stop="146420"/>
          <exon e_start="146520" e_stop="146636"/>
          <exon e_start="147572" e_stop="148832"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGTGAACCTCTTTATCTCTTATTCACAATTGATTGCCATATTCCACCATGAAAATATACAGTGCAAAAAACATCAACAAAAATGGTGGCATTAGCTTCTTCATCTCTCTGCAATTCCCCTTCTTCAATTATCCATTCCTCAAAAACATCTATACCCAATTTCATTACATTCTCTTCCTTAAGTTATTACAAGAAAAGGGGAAAATCGCTTGCAAGTCGTAGCCTTGGAATTGTTGCTGCTACTGAAGGTTCTGTTAACAAATCTAGTGGAAAAGATGAGGAAAAACAAGAAGACCCATCAGTTCCTACATGGGCTAAACCCGGTACGGATGAGCCTCCACCATGGGCTAGAAATGAAGCACAGAAAGATTCTTCAAGCATTCAAGTTCCATTCGTTGTTTATTTGCTTGCTTCTGCTGTCACAGCAATTGCAGCGGTGAGTTTTTTTCTTTTAAATCAGGAATTTCATTTTCTAGTGGAGAAGTTTTTTGGGGTCATTATAAAGATTGATTCTTGATTGGGTTTTTGAGTGCAGATTGGTTCTATTTTCGAGTACACGAATCAGAAACCTGTGTTTGGAGTTTTGGGTTCAGATAGTGTTTTTTATGCTCCATTGCTTGGGTTCTTTGTGTTCACTGGCATTCCCACTTCTGTAAGTTGATTTATTTTTTTCTCTGTTCATGTCTTTCTGCTGTTTACGTTATGTTGAATTGTTTTGAATGATGAAACTAAGTTAGCGTTTGACCATAAATTTTGGACTAAATTTTGGTAATTTATATTTTGAATATCCGTTTGGCCGTGAAATTTGATTAGTTTTTGAAAATATGATCCTCAAAATACTTTTCAAGTTCCCAAAAGGGGCTTTTTTAGTTTTTGGGACTTCCACTCACGAGACATCAAATGTATGGCCAAATACAACTTTAAGTTCTAAAACTAACAACTTCAAAGAGTTTCTACCTCCGTCTTCAAATCTATGGCCAAACGGGAGCTTAAGACTATACAAATTTGGTCTTTTTGCAAGTTCTGTTTTCAACCCACTTGTAGGTGATTTACTGCCTGTATTTCCATATTTTAAGATAATGGTAGCTACTTCTGTTATTTAAATTATAAGGTAACAATTTCATTAATTGGAAAGAGGAACCAATGAAGAAGTTCCTTAATAGATCTTTGTTTTGTTAGTTACATTTCGGTTCAAAAATATTCCCTTGTTTCAATTTGTTTGTTCTAATTTCCATTTTAGTCCGTTTAAGAAAGAACAGGTTTTTCCTTTTCTAGAAATTCGGTAATTCTAACTTTCTATATGATATGTTTAAGACTACAAAATTCAAAAGATATTTTTACTTTCTTGAATTCCGTGCCAAGTTAATACTAGACAAACAAATTGGCTAAATATGCCAGTCTTGCCTGCATGGTGAGTACTGTATGGCTGGCATAATTTGTGGAACCTAACAGGGTTGGCTCCTCGGCCGACCCTCCATTTAAAAATAATAATAATAATAAAATCAGGGGAGTACTACTTTTGGCAAAAAGAAAAAGGAAAAGTTGATGTTTCTATATTCATTTGAGCTGATTAGAACATATATCCAGGCATTCCTTTGGTTCAAATCAGTACAAGTTGCTAACAAGGAGGCTGAGGAACAAGACCGCAGGGATGGATATATGTAACATCTAATATGCAATCTTTAGGTGATATCTGCAGCATCTTATATGCATTTTTCAGATGTTGTTGATGGTTGTTTCCTAAAATACTATCATCGCAAATGAATACTTTCTCGAGGTTTGTTCTTTCTAGAGCAGCATGAGTGTAAAAATTGTCTTCTCAATACCAGTTATTCCGCTTTATCAATTCTAAAAGTCTTTAATCACCAGATTTGACTATTTCCATCTCTCATTTGAAAAAATAGTTTATCGATTTGTGGTTAGACAAGTTACTTGCTGATCTTTTGGCACAACTTGTGTAAGTTATCCACCAATCTGGTGTTGCTTCTTAACTCTTAACATATCGACCTTGGTAAATCACTAATTCTCTATCTTGTCCCTCACTACCAAGACTTAGGAGCTTGAGGCTTTGGTTCACAACGTATTTACTAATAAGTTGTAATAAATAGTCAAAAGAATATTCAAATAGGTCCTGTGAGTTAAATACATAGCATAACTTACAAGTTCAGTCTACTCTCATTTTGATGGTATATCAGCACTTATTCCTTCCTCTTATTTATTAAGTGAACGAAAAAAGTTCACACTCTAATAGCATCATAGCATGTATTGTCTGCTTGCCTTCACATGTCTTTTTGGTTTCAAGTGTTTGTACCTAAGAAACCAGCAAGTCATTTGTTTCTTGGAATTGAGTAGTGATATCTGCAGAATGGTTTGATACTACATTCTACATGTTGTATTTCATTTCTTTGAAATAGGATCGATATAGTTCTTAATCTGAAGACTATCTCTAAAGTATGCTTATATTGCTTTAGTTTACTGTTTCTCATTTTTGTAGTATCTGCCTGAGAATTTCTTGAAAAACTGATCGCGAGCTAGTAAAAAAAAATGTTCAGTCGTTCCACAACATTCTCTCTCCTTCCTCGTTGTGCTATCACACAGAACTCTGAATTTTGCAGTCTACTTCCTTTGAGCTTTTCAACTCTCTGGGGCGGTGAAGTTCATCCATTTCTCCAAGAGAAGAGAAAAGATAGGGAAGCAACATCATATGAAGTCATGTGAACACAACTTTTGTCCCTGTAGGGAGGACAATTGTATTTTTCCCTCAGAAATGAACTTTAATATAGAAATATGTCATGGGCATTTCGAATCAGAAAGGAACTTCAATATAGAAATATGTCATGGGCATTTC</genome_strand>
        <mrna_strand>GAGTGAACCTCTTTATCTCTTATTCACAATTGATTGCCATATTCCACCATGAAAATATACAGTGCAAAAAACATCAACAAAAATGGTGGCATTAGCTTCTTCATCTCTCTGCAATTCCCCTTCTTCAATTATCCATTCCTCAAAAACATCTATACCCAATTTCATTACATTCTCTTCCTTAAGTTATTACAAGAAAAGGGGAAAATCGCTTGCAAGTCGTAGCCTTGGAATTGTTGCTGCTACTGAAGGTTCTGTTAACAAATCTAGTGGAAAAGATGAGGAAAAACAAGAAGACCCATCAGTTCCTACATGGGCTAAACCCGGTACGGATGAGCCTCCACCATGGGCTAGAAATGAAGCACAGAAAGATTCTTCAAGCATTCAAGTTCCATTCGTTGTTTATTTGCTTGCTTCTGCTGTCACAGCAATTGCAGCG...................................................................................................ATTGGTTCTATTTTCGAGTACACGAATCAGAAACCTGTGTTTGGAGTTTTGGGTTCAGATAGTGTTTTTTATGCTCCATTGCTTGGGTTCTTTGTGTTCACTGGCATTCCCACTTCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTCCTTTGGTTCAAATCAGTACAAGTTGCTAACAAGGAGGCTGAGGAACAAGACCGCAGGGATGGATATATGTAACATCTAATATGCAATCTTTAGGTGATATCTGCAGCATCTTATATGCATTTTTCAGATGTTGTTGATGGTTGTTTCCTAAAATACTATCATCGCAAATGAATACTTTCTCGAGGTTTGTTCTTTCTAGAGCAGCATGAGTGTAAAAATTGTCTTCTCAATACCAGTTATTCCGCTTTATCAATTCTAAAAGTCTTTAATCACCAGATTTGACTATTTCCATCTCTCATTTGAAAAAATAGTTTATCGATTTGTGGTTAGACAAGTTACTTGCTGATCTTTTGGCACAACTTGTGTAAGTTATCCACCAATCTGGTGTTGCTTCTTAACTCTTAACATATCGACCTTGGTAAATCACTAATTCTCTATCTTGTCCCTCACTACCAAGACTTAGGAGCTTGAGGCTTTGGTTCACAACGTATTTACTAATAAGTTGTAATAAATAGTCAAAAGAATATTCAAATAGGTCCTGTGAGTTAAATACATAGCATAACTTACAAGTTCAGTCTACTCTCATTTTGATGGTATATCAGCACTTATTCCTTCCTCTTATTTATTAAGTGAACGAAAAAAGTTCACACTCTAATAGCATCATAGCATGTATTGTCTGCTTGCCTTCACATGTCTTTTTGGTTTCAAGTGTTTGTACCTAAGAAACCAGCAAGTCATTTGTTTCTTGGAATTGAGTAGTGATATCTGCAGAATGGTTTGATACTACATTCTACATGTTGTATTTCATTTCTTTGAAATAGGATCGATATAGTTCTTAATCTGAAGACTATCTCTAAAGTATGCTTATATTGCTTTAGTTTACTGTTTCTCATTTTTGTAGTATCTGCCTGAGAATTTCTTGAAAAACTGATCGCGAGCTAGTAAAAAAAAATGTTCAGTCGTTCCACAACATTCTCTCTCCTTCCTCGTTGTGCTATCACACAGAACTCTGAATTTTGCAGTCTACTTCCTTTGAGCTTTTCAACTCTCTGGGGCGGTGAAGTTCATCCATTTCTCCAAGAGAAGAGAAAAGATAGGGAAGCAACATCATATGAAGTCATGTGAACACAACTTTTGTCCCTGTAGGGAGGACAATTGTATTTTTCCCTCAGAAATGAACTTTAATATAGAAATATGTCATGGGCATTTCGAATCAGAAAGGAACTTCAATATAGAAATATGTCATGGGCATTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U587018" ref_strand="+" ref_description="SGN-U587018 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|118484433|gb|ABK94093.1| (e_value=2e-46) unknown; (*ATH) AT3G51510.1 (e_value=2e-45) | Symbol: None | expressed protein | chr3:19120041-19121030 FORWARD | Aliases: F26O13.150; ">
      <seq>tctgcaattccccttcttcaattatccattcctcaaaaacatctatacccaatttcattacattctcttccttaagttattacaagaaaaggggaaaatcgcttgcaagtcgtagccttggaattgttgctgctactgaaggttctgttaacaaatctagtggaaaagatgaggaaaaacaagaagacccatcagttcctacatgggctaaacccggtacggatgagcctccaccatgggctagaaatgaagcacagaaagattcttcaagcattcaagttccattcgttgtttatttgcttgcttctgctgtcacagcaattgcagcgattggttctattttcgagtacacgaatcagaaacctgtgtttggagttttgggttcagatagtgttttttatgctccattgcttgggttctttgtgttcactggcattcccacttctgcattcctttggttcaaatcagtacaagttgctaacaaggaggctgaggaacaagaccgcagggatggatatattctacttcctttgagcttttcaactctctggggcggtgaagttcatccatttctccaagagaagagaaaagatagggaagcaacatcatatgaagtcatgtgaacacaacttttgtccctgtagggaggacaattgtatttttccctcanaaatgaactttaatatagaaatatgtcatgggcatttcnaatcanaaaggaacttcaatatagaaatatgtcatnnnatttcaaatannaatgcatantgatgnactcaaactanttngct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0020J02-qqTP9/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0020J02.1" temp_strand="+" temp_description="C02SLm0020J02.1  AC226519.1 htgs_phase:3 submitted_to_sgn_as:C02SLm0020J02 sequenced_by:kribb upload_account_name:korea">
        <position start="145792" stop="149123"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="146092" g_stop="146420" g_length="329"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="329" r_length="329" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="146421" i_stop="146519" i_length="99">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.954" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="146520" g_stop="146636" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="330" r_stop="446" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="146637" i_stop="147571" i_length="935">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.695" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="147572" g_stop="147645" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="447" r_stop="520" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="147646" i_stop="148599" i_length="954">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.568" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="148600" g_stop="148872" g_length="273"/>
          <reference_exon_boundary r_type="cDNA" r_start="521" r_stop="791" r_length="271" r_score="0.949"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0020J02.1" gen_strand="+" ref_id="SGN-U587018" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>793</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0020J02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U587018" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="146092" e_stop="146420"/>
          <exon e_start="146520" e_stop="146636"/>
          <exon e_start="147572" e_stop="147645"/>
          <exon e_start="148600" e_stop="148872"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTGCAATTCCCCTTCTTCAATTATCCATTCCTCAAAAACATCTATACCCAATTTCATTACATTCTCTTCCTTAAGTTATTACAAGAAAAGGGGAAAATCGCTTGCAAGTCGTAGCCTTGGAATTGTTGCTGCTACTGAAGGTTCTGTTAACAAATCTAGTGGAAAAGATGAGGAAAAACAAGAAGACCCATCAGTTCCTACATGGGCTAAACCCGGTACGGATGAGCCTCCACCATGGGCTAGAAATGAAGCACAGAAAGATTCTTCAAGCATTCAAGTTCCATTCGTTGTTTATTTGCTTGCTTCTGCTGTCACAGCAATTGCAGCGGTGAGTTTTTTTCTTTTAAATCAGGAATTTCATTTTCTAGTGGAGAAGTTTTTTGGGGTCATTATAAAGATTGATTCTTGATTGGGTTTTTGAGTGCAGATTGGTTCTATTTTCGAGTACACGAATCAGAAACCTGTGTTTGGAGTTTTGGGTTCAGATAGTGTTTTTTATGCTCCATTGCTTGGGTTCTTTGTGTTCACTGGCATTCCCACTTCTGTAAGTTGATTTATTTTTTTCTCTGTTCATGTCTTTCTGCTGTTTACGTTATGTTGAATTGTTTTGAATGATGAAACTAAGTTAGCGTTTGACCATAAATTTTGGACTAAATTTTGGTAATTTATATTTTGAATATCCGTTTGGCCGTGAAATTTGATTAGTTTTTGAAAATATGATCCTCAAAATACTTTTCAAGTTCCCAAAAGGGGCTTTTTTAGTTTTTGGGACTTCCACTCACGAGACATCAAATGTATGGCCAAATACAACTTTAAGTTCTAAAACTAACAACTTCAAAGAGTTTCTACCTCCGTCTTCAAATCTATGGCCAAACGGGAGCTTAAGACTATACAAATTTGGTCTTTTTGCAAGTTCTGTTTTCAACCCACTTGTAGGTGATTTACTGCCTGTATTTCCATATTTTAAGATAATGGTAGCTACTTCTGTTATTTAAATTATAAGGTAACAATTTCATTAATTGGAAAGAGGAACCAATGAAGAAGTTCCTTAATAGATCTTTGTTTTGTTAGTTACATTTCGGTTCAAAAATATTCCCTTGTTTCAATTTGTTTGTTCTAATTTCCATTTTAGTCCGTTTAAGAAAGAACAGGTTTTTCCTTTTCTAGAAATTCGGTAATTCTAACTTTCTATATGATATGTTTAAGACTACAAAATTCAAAAGATATTTTTACTTTCTTGAATTCCGTGCCAAGTTAATACTAGACAAACAAATTGGCTAAATATGCCAGTCTTGCCTGCATGGTGAGTACTGTATGGCTGGCATAATTTGTGGAACCTAACAGGGTTGGCTCCTCGGCCGACCCTCCATTTAAAAATAATAATAATAATAAAATCAGGGGAGTACTACTTTTGGCAAAAAGAAAAAGGAAAAGTTGATGTTTCTATATTCATTTGAGCTGATTAGAACATATATCCAGGCATTCCTTTGGTTCAAATCAGTACAAGTTGCTAACAAGGAGGCTGAGGAACAAGACCGCAGGGATGGATATATGTAACATCTAATATGCAATCTTTAGGTGATATCTGCAGCATCTTATATGCATTTTTCAGATGTTGTTGATGGTTGTTTCCTAAAATACTATCATCGCAAATGAATACTTTCTCGAGGTTTGTTCTTTCTAGAGCAGCATGAGTGTAAAAATTGTCTTCTCAATACCAGTTATTCCGCTTTATCAATTCTAAAAGTCTTTAATCACCAGATTTGACTATTTCCATCTCTCATTTGAAAAAATAGTTTATCGATTTGTGGTTAGACAAGTTACTTGCTGATCTTTTGGCACAACTTGTGTAAGTTATCCACCAATCTGGTGTTGCTTCTTAACTCTTAACATATCGACCTTGGTAAATCACTAATTCTCTATCTTGTCCCTCACTACCAAGACTTAGGAGCTTGAGGCTTTGGTTCACAACGTATTTACTAATAAGTTGTAATAAATAGTCAAAAGAATATTCAAATAGGTCCTGTGAGTTAAATACATAGCATAACTTACAAGTTCAGTCTACTCTCATTTTGATGGTATATCAGCACTTATTCCTTCCTCTTATTTATTAAGTGAACGAAAAAAGTTCACACTCTAATAGCATCATAGCATGTATTGTCTGCTTGCCTTCACATGTCTTTTTGGTTTCAAGTGTTTGTACCTAAGAAACCAGCAAGTCATTTGTTTCTTGGAATTGAGTAGTGATATCTGCAGAATGGTTTGATACTACATTCTACATGTTGTATTTCATTTCTTTGAAATAGGATCGATATAGTTCTTAATCTGAAGACTATCTCTAAAGTATGCTTATATTGCTTTAGTTTACTGTTTCTCATTTTTGTAGTATCTGCCTGAGAATTTCTTGAAAAACTGATCGCGAGCTAGTAAAAAAAAATGTTCAGTCGTTCCACAACATTCTCTCTCCTTCCTCGTTGTGCTATCACACAGAACTCTGAATTTTGCAGTCTACTTCCTTTGAGCTTTTCAACTCTCTGGGGCGGTGAAGTTCATCCATTTCTCCAAGAGAAGAGAAAAGATAGGGAAGCAACATCATATGAAGTCATGTGAACACAACTTTTGTCCCTGTAGGGAGGACAATTGTATTTTTCCCTCAGAAATGAACTTTAATATAGAAATATGTCATGGGCATTTCGAATCAGAAAGGAACTTCAATATAGAAATATGTCATGGGCATTTCAAATATAAATGCATAGTGATTGCACTCAAACTATTTGGCT</genome_strand>
        <mrna_strand>TCTGCAATTCCCCTTCTTCAATTATCCATTCCTCAAAAACATCTATACCCAATTTCATTACATTCTCTTCCTTAAGTTATTACAAGAAAAGGGGAAAATCGCTTGCAAGTCGTAGCCTTGGAATTGTTGCTGCTACTGAAGGTTCTGTTAACAAATCTAGTGGAAAAGATGAGGAAAAACAAGAAGACCCATCAGTTCCTACATGGGCTAAACCCGGTACGGATGAGCCTCCACCATGGGCTAGAAATGAAGCACAGAAAGATTCTTCAAGCATTCAAGTTCCATTCGTTGTTTATTTGCTTGCTTCTGCTGTCACAGCAATTGCAGCG...................................................................................................ATTGGTTCTATTTTCGAGTACACGAATCAGAAACCTGTGTTTGGAGTTTTGGGTTCAGATAGTGTTTTTTATGCTCCATTGCTTGGGTTCTTTGTGTTCACTGGCATTCCCACTTCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTCCTTTGGTTCAAATCAGTACAAGTTGCTAACAAGGAGGCTGAGGAACAAGACCGCAGGGATGGATATAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTACTTCCTTTGAGCTTTTCAACTCTCTGGGGCGGTGAAGTTCATCCATTTCTCCAAGAGAAGAGAAAAGATAGGGAAGCAACATCATATGAAGTCATGTGAACACAACTTTTGTCCCTGTAGGGAGGACAATTGTATTTTTCCCTCANAAATGAACTTTAATATAGAAATATGTCATGGGCATTTCNAATCANAAAGGAACTTCAATATAGAAATATGTCAT-NNNATTTCAAATANNAATGCATANTGA-TGNACTCAAACTANTTNGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>31</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="3079" PGL_stop="6767"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="3079" e_stop="3238"/>
            <exon e_start="5776" e_stop="5844"/>
            <exon e_start="5947" e_stop="6053"/>
            <exon e_start="6136" e_stop="6767"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.017" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.902" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.882" e_score="0.991"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="3079" e_stop="3238" e_length="160"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.017">
            <gDNA_intron_boundary i_start="3239" i_stop="5775" i_length="2537"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="5776" e_stop="5844" e_length="69"/>
          </exon>
          <intron i_serial="2" don_prob="0.995" acc_prob="0.902">
            <gDNA_intron_boundary i_start="5845" i_stop="5946" i_length="102"/>
          </intron>
          <exon e_serial="3" e_score="0.991">
            <gDNA_exon_boundary e_start="5947" e_stop="6053" e_length="107"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.882">
            <gDNA_intron_boundary i_start="6054" i_stop="6135" i_length="82"/>
          </intron>
          <exon e_serial="4" e_score="0.997">
            <gDNA_exon_boundary e_start="6136" e_stop="6767" e_length="632"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3079" stop="3238"/>
              <exon start="5776" stop="5844"/>
              <exon start="5947" stop="6053"/>
              <exon start="6136" stop="6767"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U573442" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAACCACCATTCATTTGTTGATTGATGATGTTGATGTGCAAAGGGGTATGGCCAAGCAGCTCATCCGTTGTTCTGTTGCAGACACCAAATGGACACAAATCCTTCAAAACCCAAGCTAGCTTTTCTAGCTACCCTCTTGCCAGCAAAGTTATGGTTAGAA : ATCTATCATACTCCACTGATGAAAGTTGTCTGGAGAAAATATTTTCAAATTTTGGTCATGTTGCTGAAG : TTAAGATTGTGAAGGATGAAGTGACTAAGAGATCAAAGGGATATGCTTTTATTCAGTACACTTCTCAAGAAAATGCCATGCTTGCTCTTGATAGCATGGATCACAAG : TACATCAATGGCAGGGTTATATTTGTGGAACTTGCAAAGCCTACAAAGAAAGACTTTGGCAGATACCCGAGAAGTTGTGGACCACCTGTGGAGAGATTACCATCTGAAAATGAAGTTCCAGACCTAAAAGAAAACTGCTAAGGTAATGTTTACGCTAGTGTTAGAGTGGCAATCATTGATAGGTGCATGACAGTTCCACAAGTCATCATTCTTGAAACTACTGTGATGCAGCTTTGGTTCGACTTGATAAAACTTCTATTGCGTAAAATTTCACTCTTAGGTCACTCCTACAGGTTACAGGACTAGTTTACTTGTTCTGTCATCGCATTCTGTGTTTTGCATGTAAACTTCACACACATATATATTGTGTTTGTTCTATTAGGCATGGCGCGTTGCATGTCAGTCCAGGTCAATTACTTCATACTAGAAGAGGCTAAGTGTACTTCCGGTCATCTTTCAAAATCTGTACTTAGAATCATGTATATTAAATCGCAAGACTTGTGCTTTCTCAACTTGATGTAACTAGTTTGATGGTCAGGTTCTGCTACTGTATATGTATTTTTAGCTTTTACGCGGTGAAAATGGACTATCATGATGTACTTTAGGCTGCTGCCAAGGGTCTGGAAGTTGCC</gDNA_template>
            <first_frame> K  P  P  F  I  C  *  L  M  M  L  M  C  K  G  V  W  P  S  S  S  S  V  V  L  L  Q  T  P  N  G  H  K  S  F  K  T  Q  A  S  F  S  S  Y  P  L  A  S  K  V  M  V  R   : N  L  S  Y  S  T  D  E  S  C  L  E  K  I  F  S  N  F  G  H  V  A  E   : V  K  I  V  K  D  E  V  T  K  R  S  K  G  Y  A  F  I  Q  Y  T  S  Q  E  N  A  M  L  A  L  D  S  M  D  H  K  :  Y  I  N  G  R  V  I  F  V  E  L  A  K  P  T  K  K  D  F  G  R  Y  P  R  S  C  G  P  P  V  E  R  L  P  S  E  N  E  V  P  D  L  K  E  N  C  *  G  N  V  Y  A  S  V  R  V  A  I  I  D  R  C  M  T  V  P  Q  V  I  I  L  E  T  T  V  M  Q  L  W  F  D  L  I  K  L  L  L  R  K  I  S  L  L  G  H  S  Y  R  L  Q  D  *  F  T  C  S  V  I  A  F  C  V  L  H  V  N  F  T  H  I  Y  I  V  F  V  L  L  G  M  A  R  C  M  S  V  Q  V  N  Y  F  I  L  E  E  A  K  C  T  S  G  H  L  S  K  S  V  L  R  I  M  Y  I  K  S  Q  D  L  C  F  L  N  L  M  *  L  V  *  W  S  G  S  A  T  V  Y  V  F  L  A  F  T  R  *  K  W  T  I  M  M  Y  F  R  L  L  P  R  V  W  K  L   </first_frame>
            <second_frame>  N  H  H  S  F  V  D  *  *  C  *  C  A  K  G  Y  G  Q  A  A  H  P  L  F  C  C  R  H  Q  M  D  T  N  P  S  K  P  K  L  A  F  L  A  T  L  L  P  A  K  L  W  L  E  :  I  Y  H  T  P  L  M  K  V  V  W  R  K  Y  F  Q  I  L  V  M  L  L  K  :  L  R  L  *  R  M  K  *  L  R  D  Q  R  D  M  L  L  F  S  T  L  L  K  K  M  P  C  L  L  L  I  A  W  I  T  S :   T  S  M  A  G  L  Y  L  W  N  L  Q  S  L  Q  R  K  T  L  A  D  T  R  E  V  V  D  H  L  W  R  D  Y  H  L  K  M  K  F  Q  T  *  K  K  T  A  K  V  M  F  T  L  V  L  E  W  Q  S  L  I  G  A  *  Q  F  H  K  S  S  F  L  K  L  L  *  C  S  F  G  S  T  *  *  N  F  Y  C  V  K  F  H  S  *  V  T  P  T  G  Y  R  T  S  L  L  V  L  S  S  H  S  V  F  C  M  *  T  S  H  T  Y  I  L  C  L  F  Y  *  A  W  R  V  A  C  Q  S  R  S  I  T  S  Y  *  K  R  L  S  V  L  P  V  I  F  Q  N  L  Y  L  E  S  C  I  L  N  R  K  T  C  A  F  S  T  *  C  N  *  F  D  G  Q  V  L  L  L  Y  M  Y  F  *  L  L  R  G  E  N  G  L  S  *  C  T  L  G  C  C  Q  G  S  G  S  C  </second_frame>
            <third_frame>   T  T  I  H  L  L  I  D  D  V  D  V  Q  R  G  M  A  K  Q  L  I  R  C  S  V  A  D  T  K  W  T  Q  I  L  Q  N  P  S  *  L  F  *  L  P  S  C  Q  Q  S  Y  G  *  K :   S  I  I  L  H  *  *  K  L  S  G  E  N  I  F  K  F  W  S  C  C  *  S :   *  D  C  E  G  *  S  D  *  E  I  K  G  I  C  F  Y  S  V  H  F  S  R  K  C  H  A  C  S  *  *  H  G  S  Q   : V  H  Q  W  Q  G  Y  I  C  G  T  C  K  A  Y  K  E  R  L  W  Q  I  P  E  K  L  W  T  T  C  G  E  I  T  I  *  K  *  S  S  R  P  K  R  K  L  L  R  *  C  L  R  *  C  *  S  G  N  H  *  *  V  H  D  S  S  T  S  H  H  S  *  N  Y  C  D  A  A  L  V  R  L  D  K  T  S  I  A  *  N  F  T  L  R  S  L  L  Q  V  T  G  L  V  Y  L  F  C  H  R  I  L  C  F  A  C  K  L  H  T  H  I  Y  C  V  C  S  I  R  H  G  A  L  H  V  S  P  G  Q  L  L  H  T  R  R  G  *  V  Y  F  R  S  S  F  K  I  C  T  *  N  H  V  Y  *  I  A  R  L  V  L  S  Q  L  D  V  T  S  L  M  V  R  F  C  Y  C  I  C  I  F  S  F  Y  A  V  K  M  D  Y  H  D  V  L  *  A  A  A  K  G  L  E  V  A </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0020J02.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="3100" stop="3238"/>
                    <exon start="5776" stop="5844"/>
                    <exon start="5947" stop="6053"/>
                    <exon start="6136" stop="6276"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>453</number_coding_nucleotides>
                  <number_encoded_amino_acids>151</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LMMLMCKGVWPSSSSVVLLQTPNGHKSFKTQASFSSYPLASKVMVRNLSYSTDESCLEKIFSNFGHVAEVKIVKDEVTKRSKGYAFIQYTSQENAMLALDSMDHKYINGRVIFVELAKPTKKDFGRYPRSCGPPVERLPSENEVPDLKENC*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0020J02.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="6442" stop="6657"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>213</number_coding_nucleotides>
                  <number_encoded_amino_acids>71</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FTCSVIAFCVLHVNFTHIYIVFVLLGMARCMSVQVNYFILEEAKCTSGHLSKSVLRIMYIKSQDLCFLNLM*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="3968" e_stop="4457"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="3968" e_stop="4457" e_length="490"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3968" stop="4457"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U586894" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAGCATCAGATTGAAAGTTTACAGCTTGAATCAATAATACGGTGTCTACTATCTATGTGTAGTGTGGATGATAGTTTTTGAACTTGTCTTCGTTATATGTTTCATCCATGTCCTATAAAAGCTAAACTTTTAAGACTTTTTGAAGCTTGGATACAACATCTGTTGGTCATAGCTGAAAAACTCTATTGACTTTGTAGTATCTTTTCCAAGAAACGGTGGGCGGAACTTAAATCAAAGAGAGAATTAAGTTTGTTTAGGATCTCTATTGGTGGAATTTGTTGTCGTCTGGGTACTGCTTGACACTAGTAATGTACAACCCACATTGCTTGCTTGTTATTCTGATCAAATAGTGATGTAGTAACTAGTGATAAGCTATGTTGCTTGAACTCTTCAAAAATGTTGACAGCTGCGTGTCCGATTCTCCAAAAATAGTGTATTTTTGAAGAATCCGACACGGATGTTGCATCAAAAGCAAAGAGTTCCGGAAACT</gDNA_template>
            <first_frame> *  H  Q  I  E  S  L  Q  L  E  S  I  I  R  C  L  L  S  M  C  S  V  D  D  S  F  *  T  C  L  R  Y  M  F  H  P  C  P  I  K  A  K  L  L  R  L  F  E  A  W  I  Q  H  L  L  V  I  A  E  K  L  Y  *  L  C  S  I  F  S  K  K  R  W  A  E  L  K  S  K  R  E  L  S  L  F  R  I  S  I  G  G  I  C  C  R  L  G  T  A  *  H  *  *  C  T  T  H  I  A  C  L  L  F  *  S  N  S  D  V  V  T  S  D  K  L  C  C  L  N  S  S  K  M  L  T  A  A  C  P  I  L  Q  K  *  C  I  F  E  E  S  D  T  D  V  A  S  K  A  K  S  S  G  N  </first_frame>
            <second_frame>  S  I  R  L  K  V  Y  S  L  N  Q  *  Y  G  V  Y  Y  L  C  V  V  W  M  I  V  F  E  L  V  F  V  I  C  F  I  H  V  L  *  K  L  N  F  *  D  F  L  K  L  G  Y  N  I  C  W  S  *  L  K  N  S  I  D  F  V  V  S  F  P  R  N  G  G  R  N  L  N  Q  R  E  N  *  V  C  L  G  S  L  L  V  E  F  V  V  V  W  V  L  L  D  T  S  N  V  Q  P  T  L  L  A  C  Y  S  D  Q  I  V  M  *  *  L  V  I  S  Y  V  A  *  T  L  Q  K  C  *  Q  L  R  V  R  F  S  K  N  S  V  F  L  K  N  P  T  R  M  L  H  Q  K  Q  R  V  P  E  T </second_frame>
            <third_frame>   A  S  D  *  K  F  T  A  *  I  N  N  T  V  S  T  I  Y  V  *  C  G  *  *  F  L  N  L  S  S  L  Y  V  S  S  M  S  Y  K  S  *  T  F  K  T  F  *  S  L  D  T  T  S  V  G  H  S  *  K  T  L  L  T  L  *  Y  L  F  Q  E  T  V  G  G  T  *  I  K  E  R  I  K  F  V  *  D  L  Y  W  W  N  L  L  S  S  G  Y  C  L  T  L  V  M  Y  N  P  H  C  L  L  V  I  L  I  K  *  *  C  S  N  *  *  *  A  M  L  L  E  L  F  K  N  V  D  S  C  V  S  D  S  P  K  I  V  Y  F  *  R  I  R  H  G  C  C  I  K  S  K  E  F  R  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLm0020J02.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="10449" PGL_stop="17518"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="10449" e_stop="10785"/>
            <exon e_start="11147" e_stop="11260"/>
            <exon e_start="13200" e_stop="13295"/>
            <exon e_start="13561" e_stop="13603"/>
            <exon e_start="13898" e_stop="14053"/>
            <exon e_start="14337" e_stop="14417"/>
            <exon e_start="16908" e_stop="17006"/>
            <exon e_start="17157" e_stop="17518"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.984" e_score="0.994"/>
          <exon-intron don_prob="0.913" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.719" acc_prob="0.966" e_score="1.000"/>
          <exon-intron don_prob="0.922" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.971" acc_prob="0.988" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.264" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.987" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="10449" e_stop="10785" e_length="337"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.984">
            <gDNA_intron_boundary i_start="10786" i_stop="11146" i_length="361"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="11147" e_stop="11260" e_length="114"/>
          </exon>
          <intron i_serial="2" don_prob="0.913" acc_prob="1.000">
            <gDNA_intron_boundary i_start="11261" i_stop="13199" i_length="1939"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="13200" e_stop="13295" e_length="96"/>
          </exon>
          <intron i_serial="3" don_prob="0.719" acc_prob="0.966">
            <gDNA_intron_boundary i_start="13296" i_stop="13560" i_length="265"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="13561" e_stop="13603" e_length="43"/>
          </exon>
          <intron i_serial="4" don_prob="0.922" acc_prob="0.995">
            <gDNA_intron_boundary i_start="13604" i_stop="13897" i_length="294"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="13898" e_stop="14053" e_length="156"/>
          </exon>
          <intron i_serial="5" don_prob="0.971" acc_prob="0.988">
            <gDNA_intron_boundary i_start="14054" i_stop="14336" i_length="283"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="14337" e_stop="14417" e_length="81"/>
          </exon>
          <intron i_serial="6" don_prob="0.996" acc_prob="0.264">
            <gDNA_intron_boundary i_start="14418" i_stop="16907" i_length="2490"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="16908" e_stop="17006" e_length="99"/>
          </exon>
          <intron i_serial="7" don_prob="0.997" acc_prob="0.987">
            <gDNA_intron_boundary i_start="17007" i_stop="17156" i_length="150"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="17157" e_stop="17518" e_length="362"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10449" stop="10785"/>
              <exon start="11147" stop="11260"/>
              <exon start="13200" stop="13295"/>
              <exon start="13561" stop="13603"/>
              <exon start="13898" stop="14053"/>
              <exon start="14337" stop="14417"/>
              <exon start="16908" stop="17006"/>
              <exon start="17157" stop="17518"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U568336" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGGCAGAGGAGTGATGGGTGTGGGGTGGAGAAGAAACAAAAGAGGTTAAATATAAGAAGACTTTTTTTTTTAAAAAAAAAATTACAATTTAAGCGTTACAATTGTATTTGGAGAAGAGAGAGAGAAGAGAGAAGGGCGATAATACTATAGTAATGGAGAATGGAGGAGGAGGAGGAGAAGATCCACAATTAGAACCACCACCACAGCCGCAGCGACGGTTGAAGCCGATCCCACCGAATCCACCGCCAACAGATCGGCCGGCTCGTATTTACGCCGACGGAATCTACGATCTCTTTCACTTCGGACATGCTCGCGCCCTCGAACAAGCTAAGAAACT : ATTGCCTAACGCTCAGCTTCTTGTTGGATGCTGCAATGATGAAATCACTCACAAATTCAAGGGAAAAACTGTTATGAATGAAAAGGAGCGATATGAATCTTTGCGCCACTGCAG : ATGGGTTGATGAAGTTATTCCAGATGCGCCTTGGGTTGTAACCCCAGAGTTCATTGAGAAACATCGGATTGACTATGTGGCACATGACGCTCTTCC : TTATGCGGATGCAAGTGGAGCTGGAAATGATGTTTACGAGTAT : GTTAAGTCCATTGGTAAGTTCTTGGAGACCAAGCGGACTGATGGAATATCTACTTCAGATTTAATAATGAGGATTGTAAAAGACTACAATGAATATGTGATGCGCAATTTGGACAGAGGATATTCAAGAACGGATCTTGGTCTGAGCTACGTGAAG : GAAAAAAGGCTGAGAGTGAACAGGGGTTTGAAAAAGTTGCATGAGAGAGTAAAGAAACAACAAGAGAAAGTGGAAGAGAAG : ATACAAACAGTAGCAAAGCATCGAAATATTTGGGTGGAGAATGCTGATAGATTGGTTGCTGGTTTCCTTGAGATGTTTGAAGAGGGTTGCCACAAAATG : GGAACTGTCATAAGAGACCGAATTCAAGAACAGATGAGGACCAAGAGTATAAAAGGGCTTCTATATGACAAAGAAGAGGATGATGATGAATATGACTACTATTACGGGAGCAGTGACGATGATGAAGAATACTACGATGGTGAAGATGAAGAATAGGGTTGTTCACTTTCTCATGTTATGTGGTGATGTAAAATGTAGTTTATGGATCAAGTTGGATGAAGATGTATTATGTCCTAACGTTTGGATGCGCGTGTGATATGCGTGTTTTATTTTGGTAGAATGTAGTGGCAATTAGTTGTGTTGTAAACCGTGATCAAGCATAGTCTTGTACCATAACGCTGTCAATCAGAGTGATTTGTCTA</gDNA_template>
            <first_frame> W  Q  R  S  D  G  C  G  V  E  K  K  Q  K  R  L  N  I  R  R  L  F  F  L  K  K  K  L  Q  F  K  R  Y  N  C  I  W  R  R  E  R  E  E  R  R  A  I  I  L  *  *  W  R  M  E  E  E  E  E  K  I  H  N  *  N  H  H  H  S  R  S  D  G  *  S  R  S  H  R  I  H  R  Q  Q  I  G  R  L  V  F  T  P  T  E  S  T  I  S  F  T  S  D  M  L  A  P  S  N  K  L  R  N   : Y  C  L  T  L  S  F  L  L  D  A  A  M  M  K  S  L  T  N  S  R  E  K  L  L  *  M  K  R  S  D  M  N  L  C  A  T  A   : D  G  L  M  K  L  F  Q  M  R  L  G  L  *  P  Q  S  S  L  R  N  I  G  L  T  M  W  H  M  T  L  F   : L  M  R  M  Q  V  E  L  E  M  M  F  T  S  M :   L  S  P  L  V  S  S  W  R  P  S  G  L  M  E  Y  L  L  Q  I  *  *  *  G  L  *  K  T  T  M  N  M  *  C  A  I  W  T  E  D  I  Q  E  R  I  L  V  *  A  T  *  R :   K  K  G  *  E  *  T  G  V  *  K  S  C  M  R  E  *  R  N  N  K  R  K  W  K  R  R :   Y  K  Q  *  Q  S  I  E  I  F  G  W  R  M  L  I  D  W  L  L  V  S  L  R  C  L  K  R  V  A  T  K  W :   E  L  S  *  E  T  E  F  K  N  R  *  G  P  R  V  *  K  G  F  Y  M  T  K  K  R  M  M  M  N  M  T  T  I  T  G  A  V  T  M  M  K  N  T  T  M  V  K  M  K  N  R  V  V  H  F  L  M  L  C  G  D  V  K  C  S  L  W  I  K  L  D  E  D  V  L  C  P  N  V  W  M  R  V  *  Y  A  C  F  I  L  V  E  C  S  G  N  *  L  C  C  K  P  *  S  S  I  V  L  Y  H  N  A  V  N  Q  S  D  L  S  </first_frame>
            <second_frame>  G  R  G  V  M  G  V  G  W  R  R  N  K  R  G  *  I  *  E  D  F  F  F  *  K  K  N  Y  N  L  S  V  T  I  V  F  G  E  E  R  E  K  R  E  G  R  *  Y  Y  S  N  G  E  W  R  R  R  R  R  R  S  T  I  R  T  T  T  T  A  A  A  T  V  E  A  D  P  T  E  S  T  A  N  R  S  A  G  S  Y  L  R  R  R  N  L  R  S  L  S  L  R  T  C  S  R  P  R  T  S  *  E  T  :  I  A  *  R  S  A  S  C  W  M  L  Q  *  *  N  H  S  Q  I  Q  G  K  N  C  Y  E  *  K  G  A  I  *  I  F  A  P  L  Q  :  M  G  *  *  S  Y  S  R  C  A  L  G  C  N  P  R  V  H  *  E  T  S  D  *  L  C  G  T  *  R  S  S  :  L  C  G  C  K  W  S  W  K  *  C  L  R  V   : C  *  V  H  W  *  V  L  G  D  Q  A  D  *  W  N  I  Y  F  R  F  N  N  E  D  C  K  R  L  Q  *  I  C  D  A  Q  F  G  Q  R  I  F  K  N  G  S  W  S  E  L  R  E   : G  K  K  A  E  S  E  Q  G  F  E  K  V  A  *  E  S  K  E  T  T  R  E  S  G  R  E   : D  T  N  S  S  K  A  S  K  Y  L  G  G  E  C  *  *  I  G  C  W  F  P  *  D  V  *  R  G  L  P  Q  N   : G  N  C  H  K  R  P  N  S  R  T  D  E  D  Q  E  Y  K  R  A  S  I  *  Q  R  R  G  *  *  *  I  *  L  L  L  R  E  Q  *  R  *  *  R  I  L  R  W  *  R  *  R  I  G  L  F  T  F  S  C  Y  V  V  M  *  N  V  V  Y  G  S  S  W  M  K  M  Y  Y  V  L  T  F  G  C  A  C  D  M  R  V  L  F  W  *  N  V  V  A  I  S  C  V  V  N  R  D  Q  A  *  S  C  T  I  T  L  S  I  R  V  I  C  L </second_frame>
            <third_frame>   A  E  E  *  W  V  W  G  G  E  E  T  K  E  V  K  Y  K  K  T  F  F  F  K  K  K  I  T  I  *  A  L  Q  L  Y  L  E  K  R  E  R  R  E  K  G  D  N  T  I  V  M  E  N  G  G  G  G  G  E  D  P  Q  L  E  P  P  P  Q  P  Q  R  R  L  K  P  I  P  P  N  P  P  P  T  D  R  P  A  R  I  Y  A  D  G  I  Y  D  L  F  H  F  G  H  A  R  A  L  E  Q  A  K  K  L :   L  P  N  A  Q  L  L  V  G  C  C  N  D  E  I  T  H  K  F  K  G  K  T  V  M  N  E  K  E  R  Y  E  S  L  R  H  C  R :   W  V  D  E  V  I  P  D  A  P  W  V  V  T  P  E  F  I  E  K  H  R  I  D  Y  V  A  H  D  A  L  P :   Y  A  D  A  S  G  A  G  N  D  V  Y  E  Y  :  V  K  S  I  G  K  F  L  E  T  K  R  T  D  G  I  S  T  S  D  L  I  M  R  I  V  K  D  Y  N  E  Y  V  M  R  N  L  D  R  G  Y  S  R  T  D  L  G  L  S  Y  V  K  :  E  K  R  L  R  V  N  R  G  L  K  K  L  H  E  R  V  K  K  Q  Q  E  K  V  E  E  K  :  I  Q  T  V  A  K  H  R  N  I  W  V  E  N  A  D  R  L  V  A  G  F  L  E  M  F  E  E  G  C  H  K  M  :  G  T  V  I  R  D  R  I  Q  E  Q  M  R  T  K  S  I  K  G  L  L  Y  D  K  E  E  D  D  D  E  Y  D  Y  Y  Y  G  S  S  D  D  D  E  E  Y  Y  D  G  E  D  E  E  *  G  C  S  L  S  H  V  M  W  *  C  K  M  *  F  M  D  Q  V  G  *  R  C  I  M  S  *  R  L  D  A  R  V  I  C  V  F  Y  F  G  R  M  *  W  Q  L  V  V  L  *  T  V  I  K  H  S  L  V  P  *  R  C  Q  S  E  *  F  V   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0020J02.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="10541" stop="10785"/>
                    <exon start="11147" stop="11260"/>
                    <exon start="13200" stop="13295"/>
                    <exon start="13561" stop="13603"/>
                    <exon start="13898" stop="14053"/>
                    <exon start="14337" stop="14417"/>
                    <exon start="16908" stop="17006"/>
                    <exon start="17157" stop="17312"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>987</number_coding_nucleotides>
                  <number_encoded_amino_acids>329</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ALQLYLEKRERREKGDNTIVMENGGGGGEDPQLEPPPQPQRRLKPIPPNPPPTDRPARIYADGIYDLFHFGHARALEQAKKLLPNAQLLVGCCNDEITHKFKGKTVMNEKERYESLRHCRWVDEVIPDAPWVVTPEFIEKHRIDYVAHDALPYADASGAGNDVYEYVKSIGKFLETKRTDGISTSDLIMRIVKDYNEYVMRNLDRGYSRTDLGLSYVKEKRLRVNRGLKKLHERVKKQQEKVEEKIQTVAKHRNIWVENADRLVAGFLEMFEEGCHKMGTVIRDRIQEQMRTKSIKGLLYDKEEDDDEYDYYYGSSDDDEEYYDGEDEE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="11930" e_stop="12644"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.985"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.985">
            <gDNA_exon_boundary e_start="11930" e_stop="12644" e_length="715"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11930" stop="12644"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U603534" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCCTTCTGCTATGTAATATAGATAACAATTTAAATTGGGAAGTGTACCAACATTTAATTCTGGGAAGACAAATGGTTAGGGGGATCTACCCTAAAGAATGAATTTCCAAGCTTGTATCAGATAGCTCAGAACATAACTTTACCATCTCTCAGAATTGGCAAAATAACTGCTGGCAAATACAGTTCAGGAGGAATATTTAAGATTGGGAACTGCCTCACCTTATAGAGGTATGGCCTAAATTAGAACACTCTTGTCAAGTCATGTATTACTGACAACCTAAAATGGAAGGATGGTCCCTATTCAGTATCGGGAGGCTTTGCTCATCTATGCTCTCCTACAATGAGGTAATTGATAGATGGCTCTGGAAATTAAAGCTTCTCTCAAGATCATATGTTCTAGCTGGACAGCTTTACATGAAGCATGCCTTGCATAGGATAAACTCTACAGAAGGAAAATTCAGAGTCAGTAGATGCTTCATATGCCTAATCAAATTAGATCCCAATCGACTTCTCTTGCTTCACTTCACAATCATCACAGATATTTGGGGCATGTTTTTCTCTATTTTCGGTCTTAAAGCATAAAAGAGGCCTATGAACGCTGGTCTAAATCGAAAGTTGATTAGTCCATCGCAGATGATTCCTGCCTTATCTTTTGAGGACAGAAAAGAATTATAGATGTTTTTATGGGATTTCAACACCTACTTATTTTCTGAAGG</gDNA_template>
            <first_frame> A  F  C  Y  V  I  *  I  T  I  *  I  G  K  C  T  N  I  *  F  W  E  D  K  W  L  G  G  S  T  L  K  N  E  F  P  S  L  Y  Q  I  A  Q  N  I  T  L  P  S  L  R  I  G  K  I  T  A  G  K  Y  S  S  G  G  I  F  K  I  G  N  C  L  T  L  *  R  Y  G  L  N  *  N  T  L  V  K  S  C  I  T  D  N  L  K  W  K  D  G  P  Y  S  V  S  G  G  F  A  H  L  C  S  P  T  M  R  *  L  I  D  G  S  G  N  *  S  F  S  Q  D  H  M  F  *  L  D  S  F  T  *  S  M  P  C  I  G  *  T  L  Q  K  E  N  S  E  S  V  D  A  S  Y  A  *  S  N  *  I  P  I  D  F  S  C  F  T  S  Q  S  S  Q  I  F  G  A  C  F  S  L  F  S  V  L  K  H  K  R  G  L  *  T  L  V  *  I  E  S  *  L  V  H  R  R  *  F  L  P  Y  L  L  R  T  E  K  N  Y  R  C  F  Y  G  I  S  T  P  T  Y  F  L  K  </first_frame>
            <second_frame>  P  S  A  M  *  Y  R  *  Q  F  K  L  G  S  V  P  T  F  N  S  G  K  T  N  G  *  G  D  L  P  *  R  M  N  F  Q  A  C  I  R  *  L  R  T  *  L  Y  H  L  S  E  L  A  K  *  L  L  A  N  T  V  Q  E  E  Y  L  R  L  G  T  A  S  P  Y  R  G  M  A  *  I  R  T  L  L  S  S  H  V  L  L  T  T  *  N  G  R  M  V  P  I  Q  Y  R  E  A  L  L  I  Y  A  L  L  Q  *  G  N  *  *  M  A  L  E  I  K  A  S  L  K  I  I  C  S  S  W  T  A  L  H  E  A  C  L  A  *  D  K  L  Y  R  R  K  I  Q  S  Q  *  M  L  H  M  P  N  Q  I  R  S  Q  S  T  S  L  A  S  L  H  N  H  H  R  Y  L  G  H  V  F  L  Y  F  R  S  *  S  I  K  E  A  Y  E  R  W  S  K  S  K  V  D  *  S  I  A  D  D  S  C  L  I  F  *  G  Q  K  R  I  I  D  V  F  M  G  F  Q  H  L  L  I  F  *  R </second_frame>
            <third_frame>   L  L  L  C  N  I  D  N  N  L  N  W  E  V  Y  Q  H  L  I  L  G  R  Q  M  V  R  G  I  Y  P  K  E  *  I  S  K  L  V  S  D  S  S  E  H  N  F  T  I  S  Q  N  W  Q  N  N  C  W  Q  I  Q  F  R  R  N  I  *  D  W  E  L  P  H  L  I  E  V  W  P  K  L  E  H  S  C  Q  V  M  Y  Y  *  Q  P  K  M  E  G  W  S  L  F  S  I  G  R  L  C  S  S  M  L  S  Y  N  E  V  I  D  R  W  L  W  K  L  K  L  L  S  R  S  Y  V  L  A  G  Q  L  Y  M  K  H  A  L  H  R  I  N  S  T  E  G  K  F  R  V  S  R  C  F  I  C  L  I  K  L  D  P  N  R  L  L  L  L  H  F  T  I  I  T  D  I  W  G  M  F  F  S  I  F  G  L  K  A  *  K  R  P  M  N  A  G  L  N  R  K  L  I  S  P  S  Q  M  I  P  A  L  S  F  E  D  R  K  E  L  *  M  F  L  W  D  F  N  T  Y  L  F  S  E   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0020J02.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="12202" stop="12510"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>306</number_coding_nucleotides>
                  <number_encoded_amino_acids>102</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QPKMEGWSLFSIGRLCSSMLSYNEVIDRWLWKLKLLSRSYVLAGQLYMKHALHRINSTEGKFRVSRCFICLIKLDPNRLLLLHFTIITDIWGMFFSIFGLKA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="17518" PGL_stop="17175"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="17518" e_stop="17175"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.919"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.919">
            <gDNA_exon_boundary e_start="17518" e_stop="17175" e_length="344"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17518" stop="17175"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U596906" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TAGACAAATCACTCTGATTGACAGCGTTATGGTACAAGACTATGCTTGATCACGGTTTACAACACAACTAATTGCCACTACATTCTACCAAAATAAAACACGCATATCACACGCGCATCCAAACGTTAGGACATAATACATCTTCATCCAACTTGATCCATAAACTACATTTTACATCACCACATAACATGAGAAAGTGAACAACCCTATTCTTCATCTTCACCATCGTAGTATTCTTCATCATCGTCACTGCTCCCGTAATAGTAGTCATATTCATCATCATCCTCTTCTTTGTCATATAGAAGCCCTTTTATACTCTTGGTCCTCATCTGTTCTTGAATTCG</gDNA_template>
            <first_frame> *  T  N  H  S  D  *  Q  R  Y  G  T  R  L  C  L  I  T  V  Y  N  T  T  N  C  H  Y  I  L  P  K  *  N  T  H  I  T  R  A  S  K  R  *  D  I  I  H  L  H  P  T  *  S  I  N  Y  I  L  H  H  H  I  T  *  E  S  E  Q  P  Y  S  S  S  S  P  S  *  Y  S  S  S  S  S  L  L  P  *  *  *  S  Y  S  S  S  S  S  S  L  S  Y  R  S  P  F  I  L  L  V  L  I  C  S  *  I   </first_frame>
            <second_frame>  R  Q  I  T  L  I  D  S  V  M  V  Q  D  Y  A  *  S  R  F  T  T  Q  L  I  A  T  T  F  Y  Q  N  K  T  R  I  S  H  A  H  P  N  V  R  T  *  Y  I  F  I  Q  L  D  P  *  T  T  F  Y  I  T  T  *  H  E  K  V  N  N  P  I  L  H  L  H  H  R  S  I  L  H  H  R  H  C  S  R  N  S  S  H  I  H  H  H  P  L  L  C  H  I  E  A  L  L  Y  S  W  S  S  S  V  L  E  F  </second_frame>
            <third_frame>   D  K  S  L  *  L  T  A  L  W  Y  K  T  M  L  D  H  G  L  Q  H  N  *  L  P  L  H  S  T  K  I  K  H  A  Y  H  T  R  I  Q  T  L  G  H  N  T  S  S  S  N  L  I  H  K  L  H  F  T  S  P  H  N  M  R  K  *  T  T  L  F  F  I  F  T  I  V  V  F  F  I  I  V  T  A  P  V  I  V  V  I  F  I  I  I  L  F  F  V  I  *  K  P  F  Y  T  L  G  P  H  L  F  L  N  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLm0020J02.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="18618" PGL_stop="27896"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="18618" e_stop="18789"/>
            <exon e_start="21394" e_stop="21545"/>
            <exon e_start="21634" e_stop="21806"/>
            <exon e_start="22534" e_stop="22611"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.984" e_score="0.994"/>
          <exon-intron don_prob="0.985" acc_prob="0.528" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.706" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="18618" e_stop="18789" e_length="172"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.984">
            <gDNA_intron_boundary i_start="18790" i_stop="21393" i_length="2604"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="21394" e_stop="21545" e_length="152"/>
          </exon>
          <intron i_serial="2" don_prob="0.985" acc_prob="0.528">
            <gDNA_intron_boundary i_start="21546" i_stop="21633" i_length="88"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="21634" e_stop="21806" e_length="173"/>
          </exon>
          <intron i_serial="3" don_prob="0.986" acc_prob="0.706">
            <gDNA_intron_boundary i_start="21807" i_stop="22533" i_length="727"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="22534" e_stop="22611" e_length="78"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18618" stop="18789"/>
              <exon start="21394" stop="21545"/>
              <exon start="21634" stop="21806"/>
              <exon start="22534" stop="22611"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U589113" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACCTATGTGTATTTGGAGCCCTAATTCCTAAATCAAAACTCACAGGCCACAGCCTCCAGCTCTCTCTTTTTTGTTCTCTGAACTCTCAGAGACACTGTGTCGGCGACCAGCAAGCACAGCGGCGCAGCAAAACTCTCGTCTGTCGACTCTCTATCTCTCAGCGTGACGGATT : ATTGGTTTGGCCCTCCCTGTTTGTGCAGCAGCTGTCAGAGATCCATATCCCATTCTACGAGAGTTTTAGCTTGCCAAATCTCGACAGATTTATTCTTAACACTGTCCACTAATCTCTTTGACTTAGCTACTTGTTCACTTAGGAATCAAGAG : TAGAGAGATGGGGAAGAATAAGAGCTCAAGGAAAGGGAAGAAGGCATGGAGAGCCAACATAAGTACGGAGGATATTGAAGATTTCTTTGACAACTCCACTAAAGATGCTCTTTCAGGCGGTTCTCTTGCTCAAGTTCCCAGTGACTCTCTCTTTTATGTCGACAAATCCAGAG : ATCTTTCTGTCAAACGGAAAATTGAAAAACACCGGGAGAAAGTACTTCGATATGATAGTATACTACAAAGCAATGCCT</gDNA_template>
            <first_frame> T  Y  V  Y  L  E  P  *  F  L  N  Q  N  S  Q  A  T  A  S  S  S  L  F  F  V  L  *  T  L  R  D  T  V  S  A  T  S  K  H  S  G  A  A  K  L  S  S  V  D  S  L  S  L  S  V  T  D   : Y  W  F  G  P  P  C  L  C  S  S  C  Q  R  S  I  S  H  S  T  R  V  L  A  C  Q  I  S  T  D  L  F  L  T  L  S  T  N  L  F  D  L  A  T  C  S  L  R  N  Q  E  :  *  R  D  G  E  E  *  E  L  K  E  R  E  E  G  M  E  S  Q  H  K  Y  G  G  Y  *  R  F  L  *  Q  L  H  *  R  C  S  F  R  R  F  S  C  S  S  S  Q  *  L  S  L  L  C  R  Q  I  Q  R :   S  F  C  Q  T  E  N  *  K  T  P  G  E  S  T  S  I  *  *  Y  T  T  K  Q  C   </first_frame>
            <second_frame>  P  M  C  I  W  S  P  N  S  *  I  K  T  H  R  P  Q  P  P  A  L  S  F  L  F  S  E  L  S  E  T  L  C  R  R  P  A  S  T  A  A  Q  Q  N  S  R  L  S  T  L  Y  L  S  A  *  R  I  :  I  G  L  A  L  P  V  C  A  A  A  V  R  D  P  Y  P  I  L  R  E  F  *  L  A  K  S  R  Q  I  Y  S  *  H  C  P  L  I  S  L  T  *  L  L  V  H  L  G  I  K  S :   R  E  M  G  K  N  K  S  S  R  K  G  K  K  A  W  R  A  N  I  S  T  E  D  I  E  D  F  F  D  N  S  T  K  D  A  L  S  G  G  S  L  A  Q  V  P  S  D  S  L  F  Y  V  D  K  S  R   : D  L  S  V  K  R  K  I  E  K  H  R  E  K  V  L  R  Y  D  S  I  L  Q  S  N  A  </second_frame>
            <third_frame>   L  C  V  F  G  A  L  I  P  K  S  K  L  T  G  H  S  L  Q  L  S  L  F  C  S  L  N  S  Q  R  H  C  V  G  D  Q  Q  A  Q  R  R  S  K  T  L  V  C  R  L  S  I  S  Q  R  D  G  L :   L  V  W  P  S  L  F  V  Q  Q  L  S  E  I  H  I  P  F  Y  E  S  F  S  L  P  N  L  D  R  F  I  L  N  T  V  H  *  S  L  *  L  S  Y  L  F  T  *  E  S  R   : V  E  R  W  G  R  I  R  A  Q  G  K  G  R  R  H  G  E  P  T  *  V  R  R  I  L  K  I  S  L  T  T  P  L  K  M  L  F  Q  A  V  L  L  L  K  F  P  V  T  L  S  F  M  S  T  N  P  E  :  I  F  L  S  N  G  K  L  K  N  T  G  R  K  Y  F  D  M  I  V  Y  Y  K  A  M  P </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0020J02.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="18620" stop="18789"/>
                    <exon start="21394" stop="21505"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>279</number_coding_nucleotides>
                  <number_encoded_amino_acids>93</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LCVFGALIPKSKLTGHSLQLSLFCSLNSQRHCVGDQQAQRRSKTLVCRLSISQRDGLLVWPSLFVQQLSEIHIPFYESFSLPNLDRFILNTVH*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0020J02.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="21520" stop="21545"/>
                    <exon start="21634" stop="21806"/>
                    <exon start="22534" stop="22610"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>276</number_coding_nucleotides>
                  <number_encoded_amino_acids>92</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLVHLGIKSREMGKNKSSRKGKKAWRANISTEDIEDFFDNSTKDALSGGSLAQVPSDSLFYVDKSRDLSVKRKIEKHREKVLRYDSILQSNA</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0020J02.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="18699" stop="18789"/>
                    <exon start="21394" stop="21545"/>
                    <exon start="21634" stop="21636"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>243</number_coding_nucleotides>
                  <number_encoded_amino_acids>81</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TLRDTVSATSKHSGAAKLSSVDSLSLSVTDYWFGPPCLCSSCQRSISHSTRVLACQISTDLFLTLSTNLFDLATCSLRNQE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="18670" e_stop="18789"/>
            <exon e_start="21634" e_stop="21806"/>
            <exon e_start="22534" e_stop="22703"/>
            <exon e_start="22872" e_stop="22920"/>
            <exon e_start="23008" e_stop="23033"/>
            <exon e_start="24377" e_stop="24457"/>
            <exon e_start="24546" e_stop="24656"/>
            <exon e_start="24774" e_stop="24856"/>
            <exon e_start="26044" e_stop="26163"/>
            <exon e_start="26256" e_stop="26378"/>
            <exon e_start="26634" e_stop="26700"/>
            <exon e_start="26791" e_stop="26870"/>
            <exon e_start="27409" e_stop="27896"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.528" e_score="0.992"/>
          <exon-intron don_prob="0.986" acc_prob="0.706" e_score="1.000"/>
          <exon-intron don_prob="0.977" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.907" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.969" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.960" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.918" acc_prob="0.942" e_score="1.000"/>
          <exon-intron don_prob="0.942" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.997" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.992">
            <gDNA_exon_boundary e_start="18670" e_stop="18789" e_length="120"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.528">
            <gDNA_intron_boundary i_start="18790" i_stop="21633" i_length="2844"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="21634" e_stop="21806" e_length="173"/>
          </exon>
          <intron i_serial="2" don_prob="0.986" acc_prob="0.706">
            <gDNA_intron_boundary i_start="21807" i_stop="22533" i_length="727"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="22534" e_stop="22703" e_length="170"/>
          </exon>
          <intron i_serial="3" don_prob="0.977" acc_prob="0.998">
            <gDNA_intron_boundary i_start="22704" i_stop="22871" i_length="168"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="22872" e_stop="22920" e_length="49"/>
          </exon>
          <intron i_serial="4" don_prob="0.900" acc_prob="0.990">
            <gDNA_intron_boundary i_start="22921" i_stop="23007" i_length="87"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="23008" e_stop="23033" e_length="26"/>
          </exon>
          <intron i_serial="5" don_prob="1.000" acc_prob="0.987">
            <gDNA_intron_boundary i_start="23034" i_stop="24376" i_length="1343"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="24377" e_stop="24457" e_length="81"/>
          </exon>
          <intron i_serial="6" don_prob="1.000" acc_prob="0.907">
            <gDNA_intron_boundary i_start="24458" i_stop="24545" i_length="88"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="24546" e_stop="24656" e_length="111"/>
          </exon>
          <intron i_serial="7" don_prob="0.997" acc_prob="0.969">
            <gDNA_intron_boundary i_start="24657" i_stop="24773" i_length="117"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="24774" e_stop="24856" e_length="83"/>
          </exon>
          <intron i_serial="8" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="24857" i_stop="26043" i_length="1187"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="26044" e_stop="26163" e_length="120"/>
          </exon>
          <intron i_serial="9" don_prob="0.960" acc_prob="1.000">
            <gDNA_intron_boundary i_start="26164" i_stop="26255" i_length="92"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="26256" e_stop="26378" e_length="123"/>
          </exon>
          <intron i_serial="10" don_prob="0.918" acc_prob="0.942">
            <gDNA_intron_boundary i_start="26379" i_stop="26633" i_length="255"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="26634" e_stop="26700" e_length="67"/>
          </exon>
          <intron i_serial="11" don_prob="0.942" acc_prob="1.000">
            <gDNA_intron_boundary i_start="26701" i_stop="26790" i_length="90"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="26791" e_stop="26870" e_length="80"/>
          </exon>
          <intron i_serial="12" don_prob="0.989" acc_prob="0.997">
            <gDNA_intron_boundary i_start="26871" i_stop="27408" i_length="538"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="27409" e_stop="27896" e_length="488"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18670" stop="18789"/>
              <exon start="21634" stop="21806"/>
              <exon start="22534" stop="22703"/>
              <exon start="22872" stop="22920"/>
              <exon start="23008" stop="23033"/>
              <exon start="24377" stop="24457"/>
              <exon start="24546" stop="24656"/>
              <exon start="24774" stop="24856"/>
              <exon start="26044" stop="26163"/>
              <exon start="26256" stop="26378"/>
              <exon start="26634" stop="26700"/>
              <exon start="26791" stop="26870"/>
              <exon start="27409" stop="27896"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U584477" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CCTCCAGCTCTCTCTTTTTTGTTCTCTGAACTCTCAGAGACACTGTGTCGGCGACCAGCAAGCACAGCGGCGCAGCAAAACTCTCGTCTGTCGACTCTCTATCTCTCAGCGTGACGGATT : TAGAGAGATGGGGAAGAATAAGAGCTCAAGGAAAGGGAAGAAGGCATGGAGAGCCAACATAAGTACGGAGGATATTGAAGATTTCTTTGACAACTCCACTAAAGATGCTCTTTCAGGCGGTTCTCTTGCTCAAGTTCCCAGTGACTCTCTCTTTTATGTCGACAAATCCAGAG : ATCTTTCTGTCAAACGGAAAATTGAAAAACACCGGGAGAAAGTACTTCGATATGATAGTATACTACAAAGCAATGCCTTTGTTGAACCTGTACCTTCTTCAACTGGGAAGAAATCCAAGAAGAAAAGTAAACTTCAGATAGCCAAGGATACTGCTCAACAGGGTCAAAAG : GATTCGTCTGGTGGAGACTCTGGCATGGTTGACATTTGGAATGATAAAG : ATGAACTGGTCATCAAAACCAAAAAG : AAGCCCAAGACTTCTGTTATACCTGCTGTGGAAGTTGAGCCTCCAGGATGCTCATTCAATCCTCCATCCGAAAGTCATCAG : GATGCATTAGCTTGTGCTGTTGCAGATGAAATGCAGAAAATTTATAGAAATGAATTGGGTCCGGAGCCTATTCCATTGGTTGTTCCTGGAGAGGTAGTCAATGAAGAAGAT : ATGTATTTCCTTGAAGCGGACAGTGGGAGTGACACGGAGAATGAAAATCTAGTGGAAGACGGAAAAACAGATTTGGATAAAAG : GCCGCAAAAGCCCAAAATGCTGACTCAAGTTGAGAAGAATCGACGGGCTAGACGCAAAGAACAGTTGAAAGCAGAAGCTGAAGCAACAAAAGCAGCACAACTCTCCAAAGAGATTGATAG : CTTACCGGATATTATTCAAGAAATAGAGAGAGAGGAAGGAGAAAAACAGAAACGACATCTACGTCGTGTCACTGCTATAAAAGAAAAACTAAAATCTTGTCCACCACGCTTGGGAAAGCGCAA : ATTCGTGCCTGCTCCTGCTCAGGTTTTACTGTCTGAAGAGATTACTGGTTCCCTGCGTAAATTAAAG : GGATGTTGCACCCTTGCAAGAGATCGATTTAAAAGCCTGGAGAAAAGGGGACTAGTTGTTCCTTCAAAAAAGAGTAGCAG : GAAATAGAGTGAATTGCAAGTAACACAGATAAATGTTTTCATCACCGCACTATGAGACCATCATCCCGATCACCTGGATGAGAGACACTGTAGACAGCAAGGTGTTGGTTTATGTCTGCAAATTTGGAGTGGTAGAGCTGGCTGCTCTTACTGTTAGCAAAATGGAGATGTAGATCTGTTTATCTTACTGATGCATATGGTTCATTACACAATATTTTATAGTCATGGTCAAGTTACTTTGGGAGCAAAAGTGATAATTAATTACTGATGTATCTGGAGGCAGAAGATTGGTGTGATTTCTCTTGATGAACCAGAAATGATTCCCAGAGTCAGCCTTTTTTAAATTTTAAAATGGGAACTCTCATAATCAATATGTACCCCAAAGTTTTTAATTACTCTAATTAGGTCAACTTTTTATTTGATCACATTAGATCAACTATATATCACAAATTTTGATTTTCAAGACTTGAAAGACAACATTTTCTACT</gDNA_template>
            <first_frame> P  P  A  L  S  F  L  F  S  E  L  S  E  T  L  C  R  R  P  A  S  T  A  A  Q  Q  N  S  R  L  S  T  L  Y  L  S  A  *  R  I  :  *  R  D  G  E  E  *  E  L  K  E  R  E  E  G  M  E  S  Q  H  K  Y  G  G  Y  *  R  F  L  *  Q  L  H  *  R  C  S  F  R  R  F  S  C  S  S  S  Q  *  L  S  L  L  C  R  Q  I  Q  R :   S  F  C  Q  T  E  N  *  K  T  P  G  E  S  T  S  I  *  *  Y  T  T  K  Q  C  L  C  *  T  C  T  F  F  N  W  E  E  I  Q  E  E  K  *  T  S  D  S  Q  G  Y  C  S  T  G  S  K   : G  F  V  W  W  R  L  W  H  G  *  H  L  E  *  *  R :   *  T  G  H  Q  N  Q  K   : E  A  Q  D  F  C  Y  T  C  C  G  S  *  A  S  R  M  L  I  Q  S  S  I  R  K  S  S   : G  C  I  S  L  C  C  C  R  *  N  A  E  N  L  *  K  *  I  G  S  G  A  Y  S  I  G  C  S  W  R  G  S  Q  *  R  R   : Y  V  F  P  *  S  G  Q  W  E  *  H  G  E  *  K  S  S  G  R  R  K  N  R  F  G  *  K  :  A  A  K  A  Q  N  A  D  S  S  *  E  E  S  T  G  *  T  Q  R  T  V  E  S  R  S  *  S  N  K  S  S  T  T  L  Q  R  D  *  *  :  L  T  G  Y  Y  S  R  N  R  E  R  G  R  R  K  T  E  T  T  S  T  S  C  H  C  Y  K  R  K  T  K  I  L  S  T  T  L  G  K  A  Q  :  I  R  A  C  S  C  S  G  F  T  V  *  R  D  Y  W  F  P  A  *  I  K   : G  M  L  H  P  C  K  R  S  I  *  K  P  G  E  K  G  T  S  C  S  F  K  K  E  *  Q  :  E  I  E  *  I  A  S  N  T  D  K  C  F  H  H  R  T  M  R  P  S  S  R  S  P  G  *  E  T  L  *  T  A  R  C  W  F  M  S  A  N  L  E  W  *  S  W  L  L  L  L  L  A  K  W  R  C  R  S  V  Y  L  T  D  A  Y  G  S  L  H  N  I  L  *  S  W  S  S  Y  F  G  S  K  S  D  N  *  L  L  M  Y  L  E  A  E  D  W  C  D  F  S  *  *  T  R  N  D  S  Q  S  Q  P  F  L  N  F  K  M  G  T  L  I  I  N  M  Y  P  K  V  F  N  Y  S  N  *  V  N  F  L  F  D  H  I  R  S  T  I  Y  H  K  F  *  F  S  R  L  E  R  Q  H  F  L   </first_frame>
            <second_frame>  L  Q  L  S  L  F  C  S  L  N  S  Q  R  H  C  V  G  D  Q  Q  A  Q  R  R  S  K  T  L  V  C  R  L  S  I  S  Q  R  D  G  F :   R  E  M  G  K  N  K  S  S  R  K  G  K  K  A  W  R  A  N  I  S  T  E  D  I  E  D  F  F  D  N  S  T  K  D  A  L  S  G  G  S  L  A  Q  V  P  S  D  S  L  F  Y  V  D  K  S  R   : D  L  S  V  K  R  K  I  E  K  H  R  E  K  V  L  R  Y  D  S  I  L  Q  S  N  A  F  V  E  P  V  P  S  S  T  G  K  K  S  K  K  K  S  K  L  Q  I  A  K  D  T  A  Q  Q  G  Q  K  :  D  S  S  G  G  D  S  G  M  V  D  I  W  N  D  K   : D  E  L  V  I  K  T  K  K  :  K  P  K  T  S  V  I  P  A  V  E  V  E  P  P  G  C  S  F  N  P  P  S  E  S  H  Q  :  D  A  L  A  C  A  V  A  D  E  M  Q  K  I  Y  R  N  E  L  G  P  E  P  I  P  L  V  V  P  G  E  V  V  N  E  E  D  :  M  Y  F  L  E  A  D  S  G  S  D  T  E  N  E  N  L  V  E  D  G  K  T  D  L  D  K  R :   P  Q  K  P  K  M  L  T  Q  V  E  K  N  R  R  A  R  R  K  E  Q  L  K  A  E  A  E  A  T  K  A  A  Q  L  S  K  E  I  D  S :   L  P  D  I  I  Q  E  I  E  R  E  E  G  E  K  Q  K  R  H  L  R  R  V  T  A  I  K  E  K  L  K  S  C  P  P  R  L  G  K  R  K :   F  V  P  A  P  A  Q  V  L  L  S  E  E  I  T  G  S  L  R  K  L  K  :  G  C  C  T  L  A  R  D  R  F  K  S  L  E  K  R  G  L  V  V  P  S  K  K  S  S  R :   K  *  S  E  L  Q  V  T  Q  I  N  V  F  I  T  A  L  *  D  H  H  P  D  H  L  D  E  R  H  C  R  Q  Q  G  V  G  L  C  L  Q  I  W  S  G  R  A  G  C  S  Y  C  *  Q  N  G  D  V  D  L  F  I  L  L  M  H  M  V  H  Y  T  I  F  Y  S  H  G  Q  V  T  L  G  A  K  V  I  I  N  Y  *  C  I  W  R  Q  K  I  G  V  I  S  L  D  E  P  E  M  I  P  R  V  S  L  F  *  I  L  K  W  E  L  S  *  S  I  C  T  P  K  F  L  I  T  L  I  R  S  T  F  Y  L  I  T  L  D  Q  L  Y  I  T  N  F  D  F  Q  D  L  K  D  N  I  F  Y  </second_frame>
            <third_frame>   S  S  S  L  F  F  V  L  *  T  L  R  D  T  V  S  A  T  S  K  H  S  G  A  A  K  L  S  S  V  D  S  L  S  L  S  V  T  D   : L  E  R  W  G  R  I  R  A  Q  G  K  G  R  R  H  G  E  P  T  *  V  R  R  I  L  K  I  S  L  T  T  P  L  K  M  L  F  Q  A  V  L  L  L  K  F  P  V  T  L  S  F  M  S  T  N  P  E  :  I  F  L  S  N  G  K  L  K  N  T  G  R  K  Y  F  D  M  I  V  Y  Y  K  A  M  P  L  L  N  L  Y  L  L  Q  L  G  R  N  P  R  R  K  V  N  F  R  *  P  R  I  L  L  N  R  V  K  R :   I  R  L  V  E  T  L  A  W  L  T  F  G  M  I  K  :  M  N  W  S  S  K  P  K  R :   S  P  R  L  L  L  Y  L  L  W  K  L  S  L  Q  D  A  H  S  I  L  H  P  K  V  I  R :   M  H  *  L  V  L  L  Q  M  K  C  R  K  F  I  E  M  N  W  V  R  S  L  F  H  W  L  F  L  E  R  *  S  M  K  K  I :   C  I  S  L  K  R  T  V  G  V  T  R  R  M  K  I  *  W  K  T  E  K  Q  I  W  I  K   : G  R  K  S  P  K  C  *  L  K  L  R  R  I  D  G  L  D  A  K  N  S  *  K  Q  K  L  K  Q  Q  K  Q  H  N  S  P  K  R  L  I   : A  Y  R  I  L  F  K  K  *  R  E  R  K  E  K  N  R  N  D  I  Y  V  V  S  L  L  *  K  K  N  *  N  L  V  H  H  A  W  E  S  A   : N  S  C  L  L  L  L  R  F  Y  C  L  K  R  L  L  V  P  C  V  N  *  R :   D  V  A  P  L  Q  E  I  D  L  K  A  W  R  K  G  D  *  L  F  L  Q  K  R  V  A   : G  N  R  V  N  C  K  *  H  R  *  M  F  S  S  P  H  Y  E  T  I  I  P  I  T  W  M  R  D  T  V  D  S  K  V  L  V  Y  V  C  K  F  G  V  V  E  L  A  A  L  T  V  S  K  M  E  M  *  I  C  L  S  Y  *  C  I  W  F  I  T  Q  Y  F  I  V  M  V  K  L  L  W  E  Q  K  *  *  L  I  T  D  V  S  G  G  R  R  L  V  *  F  L  L  M  N  Q  K  *  F  P  E  S  A  F  F  K  F  *  N  G  N  S  H  N  Q  Y  V  P  Q  S  F  *  L  L  *  L  G  Q  L  F  I  *  S  H  *  I  N  Y  I  S  Q  I  L  I  F  K  T  *  K  T  T  F  S  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0020J02.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="18671" stop="18789"/>
                    <exon start="21634" stop="21806"/>
                    <exon start="22534" stop="22703"/>
                    <exon start="22872" stop="22920"/>
                    <exon start="23008" stop="23033"/>
                    <exon start="24377" stop="24457"/>
                    <exon start="24546" stop="24656"/>
                    <exon start="24774" stop="24856"/>
                    <exon start="26044" stop="26163"/>
                    <exon start="26256" stop="26378"/>
                    <exon start="26634" stop="26700"/>
                    <exon start="26791" stop="26870"/>
                    <exon start="27409" stop="27415"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1206</number_coding_nucleotides>
                  <number_encoded_amino_acids>402</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LQLSLFCSLNSQRHCVGDQQAQRRSKTLVCRLSISQRDGFREMGKNKSSRKGKKAWRANISTEDIEDFFDNSTKDALSGGSLAQVPSDSLFYVDKSRDLSVKRKIEKHREKVLRYDSILQSNAFVEPVPSSTGKKSKKKSKLQIAKDTAQQGQKDSSGGDSGMVDIWNDKDELVIKTKKKPKTSVIPAVEVEPPGCSFNPPSESHQDALACAVADEMQKIYRNELGPEPIPLVVPGEVVNEEDMYFLEADSGSDTENENLVEDGKTDLDKRPQKPKMLTQVEKNRRARRKEQLKAEAEATKAAQLSKEIDSLPDIIQEIEREEGEKQKRHLRRVTAIKEKLKSCPPRLGKRKFVPAPAQVLLSEEITGSLRKLKGCCTLARDRFKSLEKRGLVVPSKKSSRK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="44553" PGL_stop="42609"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="44553" e_stop="44025"/>
            <exon e_start="43770" e_stop="42609"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.969" acc_prob="0.990" e_score="0.998"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="44553" e_stop="44025" e_length="529"/>
          </exon>
          <intron i_serial="1" don_prob="0.969" acc_prob="0.990">
            <gDNA_intron_boundary i_start="44024" i_stop="43771" i_length="254"/>
          </intron>
          <exon e_serial="2" e_score="0.997">
            <gDNA_exon_boundary e_start="43770" e_stop="42609" e_length="1162"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44553" stop="44025"/>
              <exon start="43770" stop="42609"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U564787" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGGCAAACAGCATGGGAGAAAAAACATGGGCTTTGTCCTTGTTTTTTATCTTTGCTTGTCTATCCAATGTTTATGGAAATGTTCATTCATATGATCATCAATTGAGGAAATTACAAGCTTTTACAGCTGAAATTGCTAGTCGCGATTCGATTTCTCCTTTTCCTTCTCCTTCTCCTACTAGATTTTCTCCATCGCCATCATCACCATCAGTAATAACTGTAAGTCTTTTTAACTTTTTTCCTCAATTTATGTTAAACGTATCGTAAATTACCTATTTTATGTATTATATTAGGTTACACCAAGTCCAAAAGTATATCATGTAACATCATATGGTGCTGATCCAACTGGAAAATTAGATAGCACACAAGCTATTCTACAAGCAATTTCTGATGCACTTGAAGGTCCATCTAATGGTTTCTTAATGCAAGGAATTTCAAATCTTGGTGGTGCTCAAATTAATCTTGAAGGTGGAAATTATTTAATTAGCCAACCATTACAATTCCCTATTGTTAGCCGTGGCAATCTAATG : ATTCATGGAGGTACCCTAAAAGCTTCAGATGATTTTCCAAGAGATGGATATTTACTCGATTTATCGACATCTTCAAGCAACGGTCCTGAGTTTTTATTCGAATTCATAACTTTAAGAGATTTATTACTTGATGCAAATTTCAGAGGAGGCGGTATACAAGTGATAAATTCACTAAGAACAAGCATTGACAATTGTTACATCACACATTTCACAACAAATGGTATCATAGCCAAAGGTGGACATGAAACATACATTAGAAATTCATTTCTTGGACAACATATCACTGCTGGTGGTGATAAAGGGGAGAGGAATTTCTCCGGCACCGCGATAAATCTAGCGGGAAATGATAATTCTGTTACTGATGTAGTGATATTCTCAGCTGAAATTGGTGTAATTGTATCAGGTCAAGCAAATTTGTTATCAGGTATACATTGTTACAATAAGGCTACAGGATTTGGTGGGACTGGAATTTACTTAAAACTCCCTGGTTTAACACAAACAAGGATTGTGGATTCTTATTTGGATTACACTGGAATTGTGGCAGAGGATCCTGTTCAACTCACAATTTCAAACACATTTTTTCTTGGAGATGGATTTGTTAAGTTGAAGTCAATAAATGGTGTTGTGAATGGAGTTAACATAGTGGATAATATGTTTTCTGGATCAAATAAAGGGATTGATATTGTTCAATTGGATCAAAGTAATGGACCATTTAAGACAATTGAACAAGTTGTGGTGGATAGAAATAATGTTAAGGGGATGAATCTCAAGGGCACAATTGGAAGTGGAGTTGTTGAAGGGAATGGTACATCATGGACTATGGATTTTAATCCAATTCTTGTATTTCCTAACCTTATTAAACATGTTCAGTACACGTTTTTCCCTAGCGGGAACGTGTTCGTTAATCATGCTTTGAGAAATATATCGAATAATAAGGTTATCGTTGAATCTAACGTTCAAGTTCCAGCAAGGGTTCTCGTGACGGTGGATCAAGGGAAATGAGCTTATTTGAGCTAACAAAAATTAGGGATTTATCTAGCTAGTTATTATGTTACAAAGGTGATTAGGTCTCTTTGAATCATTCTTGAAAAAAGAAATGTTTATGTTTAAGAAAAATTCAAAAAGTATAATCCAGCAATACAAGGAATGCTTTTTGATTGGC</gDNA_template>
            <first_frame> R  Q  T  A  W  E  K  K  H  G  L  C  P  C  F  L  S  L  L  V  Y  P  M  F  M  E  M  F  I  H  M  I  I  N  *  G  N  Y  K  L  L  Q  L  K  L  L  V  A  I  R  F  L  L  F  L  L  L  L  L  L  D  F  L  H  R  H  H  H  H  Q  *  *  L  *  V  F  L  T  F  F  L  N  L  C  *  T  Y  R  K  L  P  I  L  C  I  I  L  G  Y  T  K  S  K  S  I  S  C  N  I  I  W  C  *  S  N  W  K  I  R  *  H  T  S  Y  S  T  S  N  F  *  C  T  *  R  S  I  *  W  F  L  N  A  R  N  F  K  S  W  W  C  S  N  *  S  *  R  W  K  L  F  N  *  P  T  I  T  I  P  Y  C  *  P  W  Q  S  N   : D  S  W  R  Y  P  K  S  F  R  *  F  S  K  R  W  I  F  T  R  F  I  D  I  F  K  Q  R  S  *  V  F  I  R  I  H  N  F  K  R  F  I  T  *  C  K  F  Q  R  R  R  Y  T  S  D  K  F  T  K  N  K  H  *  Q  L  L  H  H  T  F  H  N  K  W  Y  H  S  Q  R  W  T  *  N  I  H  *  K  F  I  S  W  T  T  Y  H  C  W  W  *  *  R  G  E  E  F  L  R  H  R  D  K  S  S  G  K  *  *  F  C  Y  *  C  S  D  I  L  S  *  N  W  C  N  C  I  R  S  S  K  F  V  I  R  Y  T  L  L  Q  *  G  Y  R  I  W  W  D  W  N  L  L  K  T  P  W  F  N  T  N  K  D  C  G  F  L  F  G  L  H  W  N  C  G  R  G  S  C  S  T  H  N  F  K  H  I  F  S  W  R  W  I  C  *  V  E  V  N  K  W  C  C  E  W  S  *  H  S  G  *  Y  V  F  W  I  K  *  R  D  *  Y  C  S  I  G  S  K  *  W  T  I  *  D  N  *  T  S  C  G  G  *  K  *  C  *  G  D  E  S  Q  G  H  N  W  K  W  S  C  *  R  E  W  Y  I  M  D  Y  G  F  *  S  N  S  C  I  S  *  P  Y  *  T  C  S  V  H  V  F  P  *  R  E  R  V  R  *  S  C  F  E  K  Y  I  E  *  *  G  Y  R  *  I  *  R  S  S  S  S  K  G  S  R  D  G  G  S  R  E  M  S  L  F  E  L  T  K  I  R  D  L  S  S  *  L  L  C  Y  K  G  D  *  V  S  L  N  H  S  *  K  K  K  C  L  C  L  R  K  I  Q  K  V  *  S  S  N  T  R  N  A  F  *  L   </first_frame>
            <second_frame>  G  K  Q  H  G  R  K  N  M  G  F  V  L  V  F  Y  L  C  L  S  I  Q  C  L  W  K  C  S  F  I  *  S  S  I  E  E  I  T  S  F  Y  S  *  N  C  *  S  R  F  D  F  S  F  S  F  S  F  S  Y  *  I  F  S  I  A  I  I  T  I  S  N  N  C  K  S  F  *  L  F  S  S  I  Y  V  K  R  I  V  N  Y  L  F  Y  V  L  Y  *  V  T  P  S  P  K  V  Y  H  V  T  S  Y  G  A  D  P  T  G  K  L  D  S  T  Q  A  I  L  Q  A  I  S  D  A  L  E  G  P  S  N  G  F  L  M  Q  G  I  S  N  L  G  G  A  Q  I  N  L  E  G  G  N  Y  L  I  S  Q  P  L  Q  F  P  I  V  S  R  G  N  L  M  :  I  H  G  G  T  L  K  A  S  D  D  F  P  R  D  G  Y  L  L  D  L  S  T  S  S  S  N  G  P  E  F  L  F  E  F  I  T  L  R  D  L  L  L  D  A  N  F  R  G  G  G  I  Q  V  I  N  S  L  R  T  S  I  D  N  C  Y  I  T  H  F  T  T  N  G  I  I  A  K  G  G  H  E  T  Y  I  R  N  S  F  L  G  Q  H  I  T  A  G  G  D  K  G  E  R  N  F  S  G  T  A  I  N  L  A  G  N  D  N  S  V  T  D  V  V  I  F  S  A  E  I  G  V  I  V  S  G  Q  A  N  L  L  S  G  I  H  C  Y  N  K  A  T  G  F  G  G  T  G  I  Y  L  K  L  P  G  L  T  Q  T  R  I  V  D  S  Y  L  D  Y  T  G  I  V  A  E  D  P  V  Q  L  T  I  S  N  T  F  F  L  G  D  G  F  V  K  L  K  S  I  N  G  V  V  N  G  V  N  I  V  D  N  M  F  S  G  S  N  K  G  I  D  I  V  Q  L  D  Q  S  N  G  P  F  K  T  I  E  Q  V  V  V  D  R  N  N  V  K  G  M  N  L  K  G  T  I  G  S  G  V  V  E  G  N  G  T  S  W  T  M  D  F  N  P  I  L  V  F  P  N  L  I  K  H  V  Q  Y  T  F  F  P  S  G  N  V  F  V  N  H  A  L  R  N  I  S  N  N  K  V  I  V  E  S  N  V  Q  V  P  A  R  V  L  V  T  V  D  Q  G  K  *  A  Y  L  S  *  Q  K  L  G  I  Y  L  A  S  Y  Y  V  T  K  V  I  R  S  L  *  I  I  L  E  K  R  N  V  Y  V  *  E  K  F  K  K  Y  N  P  A  I  Q  G  M  L  F  D  W  </second_frame>
            <third_frame>   A  N  S  M  G  E  K  T  W  A  L  S  L  F  F  I  F  A  C  L  S  N  V  Y  G  N  V  H  S  Y  D  H  Q  L  R  K  L  Q  A  F  T  A  E  I  A  S  R  D  S  I  S  P  F  P  S  P  S  P  T  R  F  S  P  S  P  S  S  P  S  V  I  T  V  S  L  F  N  F  F  P  Q  F  M  L  N  V  S  *  I  T  Y  F  M  Y  Y  I  R  L  H  Q  V  Q  K  Y  I  M  *  H  H  M  V  L  I  Q  L  E  N  *  I  A  H  K  L  F  Y  K  Q  F  L  M  H  L  K  V  H  L  M  V  S  *  C  K  E  F  Q  I  L  V  V  L  K  L  I  L  K  V  E  I  I  *  L  A  N  H  Y  N  S  L  L  L  A  V  A  I  *  * :   F  M  E  V  P  *  K  L  Q  M  I  F  Q  E  M  D  I  Y  S  I  Y  R  H  L  Q  A  T  V  L  S  F  Y  S  N  S  *  L  *  E  I  Y  Y  L  M  Q  I  S  E  E  A  V  Y  K  *  *  I  H  *  E  Q  A  L  T  I  V  T  S  H  I  S  Q  Q  M  V  S  *  P  K  V  D  M  K  H  T  L  E  I  H  F  L  D  N  I  S  L  L  V  V  I  K  G  R  G  I  S  P  A  P  R  *  I  *  R  E  M  I  I  L  L  L  M  *  *  Y  S  Q  L  K  L  V  *  L  Y  Q  V  K  Q  I  C  Y  Q  V  Y  I  V  T  I  R  L  Q  D  L  V  G  L  E  F  T  *  N  S  L  V  *  H  K  Q  G  L  W  I  L  I  W  I  T  L  E  L  W  Q  R  I  L  F  N  S  Q  F  Q  T  H  F  F  L  E  M  D  L  L  S  *  S  Q  *  M  V  L  *  M  E  L  T  *  W  I  I  C  F  L  D  Q  I  K  G  L  I  L  F  N  W  I  K  V  M  D  H  L  R  Q  L  N  K  L  W  W  I  E  I  M  L  R  G  *  I  S  R  A  Q  L  E  V  E  L  L  K  G  M  V  H  H  G  L  W  I  L  I  Q  F  L  Y  F  L  T  L  L  N  M  F  S  T  R  F  S  L  A  G  T  C  S  L  I  M  L  *  E  I  Y  R  I  I  R  L  S  L  N  L  T  F  K  F  Q  Q  G  F  S  *  R  W  I  K  G  N  E  L  I  *  A  N  K  N  *  G  F  I  *  L  V  I  M  L  Q  R  *  L  G  L  F  E  S  F  L  K  K  E  M  F  M  F  K  K  N  S  K  S  I  I  Q  Q  Y  K  E  C  F  L  I  G </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0020J02.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="44261" stop="44025"/>
                    <exon start="43770" stop="42769"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1236</number_coding_nucleotides>
                  <number_encoded_amino_acids>412</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VTPSPKVYHVTSYGADPTGKLDSTQAILQAISDALEGPSNGFLMQGISNLGGAQINLEGGNYLISQPLQFPIVSRGNLMIHGGTLKASDDFPRDGYLLDLSTSSSNGPEFLFEFITLRDLLLDANFRGGGIQVINSLRTSIDNCYITHFTTNGIIAKGGHETYIRNSFLGQHITAGGDKGERNFSGTAINLAGNDNSVTDVVIFSAEIGVIVSGQANLLSGIHCYNKATGFGGTGIYLKLPGLTQTRIVDSYLDYTGIVAEDPVQLTISNTFFLGDGFVKLKSINGVVNGVNIVDNMFSGSNKGIDIVQLDQSNGPFKTIEQVVVDRNNVKGMNLKGTIGSGVVEGNGTSWTMDFNPILVFPNLIKHVQYTFFPSGNVFVNHALRNISNNKVIVESNVQVPARVLVTVDQGK*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0020J02.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="44551" stop="44288"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>261</number_coding_nucleotides>
                  <number_encoded_amino_acids>87</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ANSMGEKTWALSLFFIFACLSNVYGNVHSYDHQLRKLQAFTAEIASRDSISPFPSPSPTRFSPSPSSPSVITVSLFNFFPQFMLNVS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="44543" e_stop="44336"/>
            <exon e_start="44261" e_stop="44025"/>
            <exon e_start="43770" e_stop="43428"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.963" e_score="0.995"/>
          <exon-intron don_prob="0.969" acc_prob="0.990" e_score="1.000"/>
          <exon-only e_score="0.988"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="44543" e_stop="44336" e_length="208"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.963">
            <gDNA_intron_boundary i_start="44335" i_stop="44262" i_length="74"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="44261" e_stop="44025" e_length="237"/>
          </exon>
          <intron i_serial="2" don_prob="0.969" acc_prob="0.990">
            <gDNA_intron_boundary i_start="44024" i_stop="43771" i_length="254"/>
          </intron>
          <exon e_serial="3" e_score="0.988">
            <gDNA_exon_boundary e_start="43770" e_stop="43428" e_length="343"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44543" stop="44336"/>
              <exon start="44261" stop="44025"/>
              <exon start="43770" stop="43428"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U564783" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CATGGGAGAAAAAACATGGGCTTTGTCCTTGTTTTTTATCTTTGCTTGTCTATCCAATGTTTATGGAAATGTTCATTCATATGATCATCAATTGAGGAAATTACAAGCTTTTACAGCTGAAATTGCTAGTCGCGATTCGATTTCTCCTTTTCCTTCTCCTTCTCCTACTAGATTTTCTCCATCGCCATCATCACCATCAGTAATAACT : GTTACACCAAGTCCAAAAGTATATCATGTAACATCATATGGTGCTGATCCAACTGGAAAATTAGATAGCACACAAGCTATTCTACAAGCAATTTCTGATGCACTTGAAGGTCCATCTAATGGTTTCTTAATGCAAGGAATTTCAAATCTTGGTGGTGCTCAAATTAATCTTGAAGGTGGAAATTATTTAATTAGCCAACCATTACAATTCCCTATTGTTAGCCGTGGCAATCTAATG : ATTCATGGAGGTACCCTAAAAGCTTCAGATGATTTTCCAAGAGATGGATATTTACTCGATTTATCGACATCTTCAAGCAACGGTCCTGAGTTTTTATTCGAATTCATAACTTTAAGAGATTTATTACTTGATGCAAATTTCAGAGGAGGCGGTATACAAGTGATAAATTCACTAAGAACAAGCATTGACAATTGTTACATCACACATTTCACAACAAATGGTATCATAGCCAAAGGTGGACATGAAACATACATTAGAAATTCATTTCTTGGACAACATATCACTGCTGGTGGTGATAAAGGGGAGAGGAATTTCTCCGGCACCGCGATAAATCTAGCGGGAA</gDNA_template>
            <first_frame> H  G  R  K  N  M  G  F  V  L  V  F  Y  L  C  L  S  I  Q  C  L  W  K  C  S  F  I  *  S  S  I  E  E  I  T  S  F  Y  S  *  N  C  *  S  R  F  D  F  S  F  S  F  S  F  S  Y  *  I  F  S  I  A  I  I  T  I  S  N  N   : C  Y  T  K  S  K  S  I  S  C  N  I  I  W  C  *  S  N  W  K  I  R  *  H  T  S  Y  S  T  S  N  F  *  C  T  *  R  S  I  *  W  F  L  N  A  R  N  F  K  S  W  W  C  S  N  *  S  *  R  W  K  L  F  N  *  P  T  I  T  I  P  Y  C  *  P  W  Q  S  N   : D  S  W  R  Y  P  K  S  F  R  *  F  S  K  R  W  I  F  T  R  F  I  D  I  F  K  Q  R  S  *  V  F  I  R  I  H  N  F  K  R  F  I  T  *  C  K  F  Q  R  R  R  Y  T  S  D  K  F  T  K  N  K  H  *  Q  L  L  H  H  T  F  H  N  K  W  Y  H  S  Q  R  W  T  *  N  I  H  *  K  F  I  S  W  T  T  Y  H  C  W  W  *  *  R  G  E  E  F  L  R  H  R  D  K  S  S  G   </first_frame>
            <second_frame>  M  G  E  K  T  W  A  L  S  L  F  F  I  F  A  C  L  S  N  V  Y  G  N  V  H  S  Y  D  H  Q  L  R  K  L  Q  A  F  T  A  E  I  A  S  R  D  S  I  S  P  F  P  S  P  S  P  T  R  F  S  P  S  P  S  S  P  S  V  I  T  :  V  T  P  S  P  K  V  Y  H  V  T  S  Y  G  A  D  P  T  G  K  L  D  S  T  Q  A  I  L  Q  A  I  S  D  A  L  E  G  P  S  N  G  F  L  M  Q  G  I  S  N  L  G  G  A  Q  I  N  L  E  G  G  N  Y  L  I  S  Q  P  L  Q  F  P  I  V  S  R  G  N  L  M  :  I  H  G  G  T  L  K  A  S  D  D  F  P  R  D  G  Y  L  L  D  L  S  T  S  S  S  N  G  P  E  F  L  F  E  F  I  T  L  R  D  L  L  L  D  A  N  F  R  G  G  G  I  Q  V  I  N  S  L  R  T  S  I  D  N  C  Y  I  T  H  F  T  T  N  G  I  I  A  K  G  G  H  E  T  Y  I  R  N  S  F  L  G  Q  H  I  T  A  G  G  D  K  G  E  R  N  F  S  G  T  A  I  N  L  A  G  </second_frame>
            <third_frame>   W  E  K  K  H  G  L  C  P  C  F  L  S  L  L  V  Y  P  M  F  M  E  M  F  I  H  M  I  I  N  *  G  N  Y  K  L  L  Q  L  K  L  L  V  A  I  R  F  L  L  F  L  L  L  L  L  L  D  F  L  H  R  H  H  H  H  Q  *  *  L :   L  H  Q  V  Q  K  Y  I  M  *  H  H  M  V  L  I  Q  L  E  N  *  I  A  H  K  L  F  Y  K  Q  F  L  M  H  L  K  V  H  L  M  V  S  *  C  K  E  F  Q  I  L  V  V  L  K  L  I  L  K  V  E  I  I  *  L  A  N  H  Y  N  S  L  L  L  A  V  A  I  *  * :   F  M  E  V  P  *  K  L  Q  M  I  F  Q  E  M  D  I  Y  S  I  Y  R  H  L  Q  A  T  V  L  S  F  Y  S  N  S  *  L  *  E  I  Y  Y  L  M  Q  I  S  E  E  A  V  Y  K  *  *  I  H  *  E  Q  A  L  T  I  V  T  S  H  I  S  Q  Q  M  V  S  *  P  K  V  D  M  K  H  T  L  E  I  H  F  L  D  N  I  S  L  L  V  V  I  K  G  R  G  I  S  P  A  P  R  *  I  *  R  E </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0020J02.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="44542" stop="44336"/>
                    <exon start="44261" stop="44025"/>
                    <exon start="43770" stop="43429"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>786</number_coding_nucleotides>
                  <number_encoded_amino_acids>262</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MGEKTWALSLFFIFACLSNVYGNVHSYDHQLRKLQAFTAEIASRDSISPFPSPSPTRFSPSPSSPSVITVTPSPKVYHVTSYGADPTGKLDSTQAILQAISDALEGPSNGFLMQGISNLGGAQINLEGGNYLISQPLQFPIVSRGNLMIHGGTLKASDDFPRDGYLLDLSTSSSNGPEFLFEFITLRDLLLDANFRGGGIQVINSLRTSIDNCYITHFTTNGIIAKGGHETYIRNSFLGQHITAGGDKGERNFSGTAINLAG</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="56399" PGL_stop="53080"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="56399" e_stop="56231"/>
            <exon e_start="56150" e_stop="55926"/>
            <exon e_start="53878" e_stop="53768"/>
            <exon e_start="53306" e_stop="53080"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.972" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.977" e_score="1.000"/>
          <exon-only e_score="0.987"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="56399" e_stop="56231" e_length="169"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.995">
            <gDNA_intron_boundary i_start="56230" i_stop="56151" i_length="80"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="56150" e_stop="55926" e_length="225"/>
          </exon>
          <intron i_serial="2" don_prob="0.972" acc_prob="0.990">
            <gDNA_intron_boundary i_start="55925" i_stop="53879" i_length="2047"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="53878" e_stop="53768" e_length="111"/>
          </exon>
          <intron i_serial="3" don_prob="0.992" acc_prob="0.977">
            <gDNA_intron_boundary i_start="53767" i_stop="53307" i_length="461"/>
          </intron>
          <exon e_serial="4" e_score="0.987">
            <gDNA_exon_boundary e_start="53306" e_stop="53080" e_length="227"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="56399" stop="56231"/>
              <exon start="56150" stop="55926"/>
              <exon start="53878" stop="53768"/>
              <exon start="53306" stop="53080"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U570799" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACCTATTTCATTCATGGTTTTGTAAAGGTGGGAGAAGATAATGCGATTGTTTCAGTACTTGAGTCAATGGAAATCCAAAGCCAATGACGGAATTCAACAATCACTTCTTATCGCCAAATTCCTCTGCTTATTACATGTCACAAGCAACTACGTTTTCTCTCCAGTAATG : GTGTACGGTCCGAGCATGTTGCCGACCCTGAATCTTACCGGTGATGTTTTGCTGGTTGAACATTTGTCGCCGTTGTTCGATAAGTTGGGACCTGGAGATGTAATCCTTGTTCGGTCACCTGATAACCCTAGGAAGACTGTAACTAAACGAATTATTGGCATGGAGGGTGATACTGTCACTTTTCTAGCTGACCCTTCAAAAAGTGACCGGTATATTAGCTTAAAG : GTTCCAAAGGGGCATGTTTGGATTCAAGGAGATAACATCTATGCTTCAAAGGATTCACGACAGCTCGGGCCAATCCCTTGTGGCCTTATCTCGGGAAAAGTGTTATACAGA : GTATGGCCTCCAGAGTGTTTTGGTTCATTATGACCACAAAAACAATGTATTGTACTGAAGATATACAATTAAAATGAGAAATGTGATTCTTTACTAGTCCTTATTACCTAATTCTAAATAATGATTGTTAATTTATTTTGGTAAGGATGCTTTACCATGAATTTGATTTTTTTGTACATTTGCAATATTTAAGGTATGAAATCAAGAAAAATGTTGAGAGACAATAT</gDNA_template>
            <first_frame> T  Y  F  I  H  G  F  V  K  V  G  E  D  N  A  I  V  S  V  L  E  S  M  E  I  Q  S  Q  *  R  N  S  T  I  T  S  Y  R  Q  I  P  L  L  I  T  C  H  K  Q  L  R  F  L  S  S  N   : G  V  R  S  E  H  V  A  D  P  E  S  Y  R  *  C  F  A  G  *  T  F  V  A  V  V  R  *  V  G  T  W  R  C  N  P  C  S  V  T  *  *  P  *  E  D  C  N  *  T  N  Y  W  H  G  G  *  Y  C  H  F  S  S  *  P  F  K  K  *  P  V  Y  *  L  K   : G  S  K  G  A  C  L  D  S  R  R  *  H  L  C  F  K  G  F  T  T  A  R  A  N  P  L  W  P  Y  L  G  K  S  V  I  Q   : S  M  A  S  R  V  F  W  F  I  M  T  T  K  T  M  Y  C  T  E  D  I  Q  L  K  *  E  M  *  F  F  T  S  P  Y  Y  L  I  L  N  N  D  C  *  F  I  L  V  R  M  L  Y  H  E  F  D  F  F  V  H  L  Q  Y  L  R  Y  E  I  K  K  N  V  E  R  Q  Y </first_frame>
            <second_frame>  P  I  S  F  M  V  L  *  R  W  E  K  I  M  R  L  F  Q  Y  L  S  Q  W  K  S  K  A  N  D  G  I  Q  Q  S  L  L  I  A  K  F  L  C  L  L  H  V  T  S  N  Y  V  F  S  P  V  M  :  V  Y  G  P  S  M  L  P  T  L  N  L  T  G  D  V  L  L  V  E  H  L  S  P  L  F  D  K  L  G  P  G  D  V  I  L  V  R  S  P  D  N  P  R  K  T  V  T  K  R  I  I  G  M  E  G  D  T  V  T  F  L  A  D  P  S  K  S  D  R  Y  I  S  L  K  :  V  P  K  G  H  V  W  I  Q  G  D  N  I  Y  A  S  K  D  S  R  Q  L  G  P  I  P  C  G  L  I  S  G  K  V  L  Y  R  :  V  W  P  P  E  C  F  G  S  L  *  P  Q  K  Q  C  I  V  L  K  I  Y  N  *  N  E  K  C  D  S  L  L  V  L  I  T  *  F  *  I  M  I  V  N  L  F  W  *  G  C  F  T  M  N  L  I  F  L  Y  I  C  N  I  *  G  M  K  S  R  K  M  L  R  D  N   </second_frame>
            <third_frame>   L  F  H  S  W  F  C  K  G  G  R  R  *  C  D  C  F  S  T  *  V  N  G  N  P  K  P  M  T  E  F  N  N  H  F  L  S  P  N  S  S  A  Y  Y  M  S  Q  A  T  T  F  S  L  Q  *  W :   C  T  V  R  A  C  C  R  P  *  I  L  P  V  M  F  C  W  L  N  I  C  R  R  C  S  I  S  W  D  L  E  M  *  S  L  F  G  H  L  I  T  L  G  R  L  *  L  N  E  L  L  A  W  R  V  I  L  S  L  F  *  L  T  L  Q  K  V  T  G  I  L  A  *  R :   F  Q  R  G  M  F  G  F  K  E  I  T  S  M  L  Q  R  I  H  D  S  S  G  Q  S  L  V  A  L  S  R  E  K  C  Y  T  E :   Y  G  L  Q  S  V  L  V  H  Y  D  H  K  N  N  V  L  Y  *  R  Y  T  I  K  M  R  N  V  I  L  Y  *  S  L  L  P  N  S  K  *  *  L  L  I  Y  F  G  K  D  A  L  P  *  I  *  F  F  C  T  F  A  I  F  K  V  *  N  Q  E  K  C  *  E  T  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0020J02.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="56374" stop="56231"/>
                    <exon start="56150" stop="55926"/>
                    <exon start="53878" stop="53768"/>
                    <exon start="53306" stop="53274"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>510</number_coding_nucleotides>
                  <number_encoded_amino_acids>170</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RWEKIMRLFQYLSQWKSKANDGIQQSLLIAKFLCLLHVTSNYVFSPVMVYGPSMLPTLNLTGDVLLVEHLSPLFDKLGPGDVILVRSPDNPRKTVTKRIIGMEGDTVTFLADPSKSDRYISLKVPKGHVWIQGDNIYASKDSRQLGPIPCGLISGKVLYRVWPPECFGSL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="60822" PGL_stop="66427"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="60822" e_stop="61036"/>
            <exon e_start="61844" e_stop="61932"/>
            <exon e_start="62115" e_stop="62218"/>
            <exon e_start="62290" e_stop="62374"/>
            <exon e_start="62490" e_stop="62606"/>
            <exon e_start="64225" e_stop="64334"/>
            <exon e_start="64414" e_stop="64476"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.978" acc_prob="0.998" e_score="0.995"/>
          <exon-intron don_prob="0.998" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.982" e_score="1.000"/>
          <exon-intron don_prob="0.801" acc_prob="0.891" e_score="1.000"/>
          <exon-intron don_prob="0.976" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.959" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="60822" e_stop="61036" e_length="215"/>
          </exon>
          <intron i_serial="1" don_prob="0.978" acc_prob="0.998">
            <gDNA_intron_boundary i_start="61037" i_stop="61843" i_length="807"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="61844" e_stop="61932" e_length="89"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="1.000">
            <gDNA_intron_boundary i_start="61933" i_stop="62114" i_length="182"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="62115" e_stop="62218" e_length="104"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.982">
            <gDNA_intron_boundary i_start="62219" i_stop="62289" i_length="71"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="62290" e_stop="62374" e_length="85"/>
          </exon>
          <intron i_serial="4" don_prob="0.801" acc_prob="0.891">
            <gDNA_intron_boundary i_start="62375" i_stop="62489" i_length="115"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="62490" e_stop="62606" e_length="117"/>
          </exon>
          <intron i_serial="5" don_prob="0.976" acc_prob="1.000">
            <gDNA_intron_boundary i_start="62607" i_stop="64224" i_length="1618"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="64225" e_stop="64334" e_length="110"/>
          </exon>
          <intron i_serial="6" don_prob="0.000" acc_prob="0.959">
            <gDNA_intron_boundary i_start="64335" i_stop="64413" i_length="79"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="64414" e_stop="64476" e_length="63"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60822" stop="61036"/>
              <exon start="61844" stop="61932"/>
              <exon start="62115" stop="62218"/>
              <exon start="62290" stop="62374"/>
              <exon start="62490" stop="62606"/>
              <exon start="64225" stop="64334"/>
              <exon start="64414" stop="64476"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U562908" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAGTTCATTTTATCTTCTCTCATTCCAATTTTGGAGTGCCGTGGCGTTGTTCGCTTGCTTTTATAAGCCTTTGCAGCAAGCAGCCATGGCGGCGCCTCCTCCTTCTATTACATTCTCATTTCCAGTTCCCCATGCAATCATGATGAAATCTATGTCAATCTTATCCTTCATTCTTCTTCTTTCACCTTTGTTCGCCATGGCTAACACATCATTTG : GTGCTGAAAATACAGAAGGCATAAAGTATGATCTTTTCCCTGAAATCCTCAAGGAGGAAGCTGTAGGAAGACTTAATGAGCTTGGAAAG : GTAAGTGATGCAAATGGCTACCTAGAGAGGACCTTCCAGAGCCCTGCATCGGTCAGAGCAGGAAATCTTCTTCGTGCATGGATGGAAGATGCAGGCTTGAAAAC : GTGGGTGGACCAAATGGGCAATGTCCATGGTCGGGCTGAAGGAATTAATCCAAGTGAAAAGGCTTTGTTAATTGGCTCTCATTTG : GATACAGTTATTGATGCTGGATTCTTTGATGGTTCATTGGGCATAATTTGTGCAATATCTGCATTGAAGGCACTGAATTCCTCTGGAAGGTTGGGTAAACTCCGGCGGCCAGTTGAG : GTAATCGCATTTAGTGATGAGGAGGGAGTAAGGTTTCAGTCAACCTTCTTGGGTAGTGCAGCTATTGCTGGCATATTACCAGTTTCAGCGTTGCAAGTACATGATAAGAA : TGGTGTGACAGTGCAAGGTGCTCTGAGAGCAAGTTCTATAGAGACTACAGAAGAAAACCTTTT</gDNA_template>
            <first_frame> K  F  I  L  S  S  L  I  P  I  L  E  C  R  G  V  V  R  L  L  L  *  A  F  A  A  S  S  H  G  G  A  S  S  F  Y  Y  I  L  I  S  S  S  P  C  N  H  D  E  I  Y  V  N  L  I  L  H  S  S  S  F  T  F  V  R  H  G  *  H  I  I  W :   C  *  K  Y  R  R  H  K  V  *  S  F  P  *  N  P  Q  G  G  S  C  R  K  T  *  *  A  W  K   : G  K  *  C  K  W  L  P  R  E  D  L  P  E  P  C  I  G  Q  S  R  K  S  S  S  C  M  D  G  R  C  R  L  E  N  :  V  G  G  P  N  G  Q  C  P  W  S  G  *  R  N  *  S  K  *  K  G  F  V  N  W  L  S  F   : G  Y  S  Y  *  C  W  I  L  *  W  F  I  G  H  N  L  C  N  I  C  I  E  G  T  E  F  L  W  K  V  G  *  T  P  A  A  S  *   : G  N  R  I  *  *  *  G  G  S  K  V  S  V  N  L  L  G  *  C  S  Y  C  W  H  I  T  S  F  S  V  A  S  T  *  *  E  :  W  C  D  S  A  R  C  S  E  S  K  F  Y  R  D  Y  R  R  K  P  F </first_frame>
            <second_frame>  S  S  F  Y  L  L  S  F  Q  F  W  S  A  V  A  L  F  A  C  F  Y  K  P  L  Q  Q  A  A  M  A  A  P  P  P  S  I  T  F  S  F  P  V  P  H  A  I  M  M  K  S  M  S  I  L  S  F  I  L  L  L  S  P  L  F  A  M  A  N  T  S  F   : G  A  E  N  T  E  G  I  K  Y  D  L  F  P  E  I  L  K  E  E  A  V  G  R  L  N  E  L  G  K  :  V  S  D  A  N  G  Y  L  E  R  T  F  Q  S  P  A  S  V  R  A  G  N  L  L  R  A  W  M  E  D  A  G  L  K  T :   W  V  D  Q  M  G  N  V  H  G  R  A  E  G  I  N  P  S  E  K  A  L  L  I  G  S  H  L  :  D  T  V  I  D  A  G  F  F  D  G  S  L  G  I  I  C  A  I  S  A  L  K  A  L  N  S  S  G  R  L  G  K  L  R  R  P  V  E  :  V  I  A  F  S  D  E  E  G  V  R  F  Q  S  T  F  L  G  S  A  A  I  A  G  I  L  P  V  S  A  L  Q  V  H  D  K  N :   G  V  T  V  Q  G  A  L  R  A  S  S  I  E  T  T  E  E  N  L   </second_frame>
            <third_frame>   V  H  F  I  F  S  H  S  N  F  G  V  P  W  R  C  S  L  A  F  I  S  L  C  S  K  Q  P  W  R  R  L  L  L  L  L  H  S  H  F  Q  F  P  M  Q  S  *  *  N  L  C  Q  S  Y  P  S  F  F  F  F  H  L  C  S  P  W  L  T  H  H  L  :  V  L  K  I  Q  K  A  *  S  M  I  F  S  L  K  S  S  R  R  K  L  *  E  D  L  M  S  L  E  R :   *  V  M  Q  M  A  T  *  R  G  P  S  R  A  L  H  R  S  E  Q  E  I  F  F  V  H  G  W  K  M  Q  A  *  K   : R  G  W  T  K  W  A  M  S  M  V  G  L  K  E  L  I  Q  V  K  R  L  C  *  L  A  L  I  W :   I  Q  L  L  M  L  D  S  L  M  V  H  W  A  *  F  V  Q  Y  L  H  *  R  H  *  I  P  L  E  G  W  V  N  S  G  G  Q  L  R :   *  S  H  L  V  M  R  R  E  *  G  F  S  Q  P  S  W  V  V  Q  L  L  L  A  Y  Y  Q  F  Q  R  C  K  Y  M  I  R   : M  V  *  Q  C  K  V  L  *  E  Q  V  L  *  R  L  Q  K  K  T  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0020J02.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="60823" stop="61036"/>
                    <exon start="61844" stop="61932"/>
                    <exon start="62115" stop="62218"/>
                    <exon start="62290" stop="62374"/>
                    <exon start="62490" stop="62606"/>
                    <exon start="64225" stop="64334"/>
                    <exon start="64414" stop="64474"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>780</number_coding_nucleotides>
                  <number_encoded_amino_acids>260</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SSFYLLSFQFWSAVALFACFYKPLQQAAMAAPPPSITFSFPVPHAIMMKSMSILSFILLLSPLFAMANTSFGAENTEGIKYDLFPEILKEEAVGRLNELGKVSDANGYLERTFQSPASVRAGNLLRAWMEDAGLKTWVDQMGNVHGRAEGINPSEKALLIGSHLDTVIDAGFFDGSLGIICAISALKALNSSGRLGKLRRPVEVIAFSDEEGVRFQSTFLGSAAIAGILPVSALQVHDKNGVTVQGALRASSIETTEENL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="60855" e_stop="61036"/>
            <exon e_start="61844" e_stop="61932"/>
            <exon e_start="62115" e_stop="62218"/>
            <exon e_start="62490" e_stop="62606"/>
            <exon e_start="64225" e_stop="64334"/>
            <exon e_start="64414" e_stop="64519"/>
            <exon e_start="64626" e_stop="64712"/>
            <exon e_start="65262" e_stop="65504"/>
            <exon e_start="65618" e_stop="65743"/>
            <exon e_start="65817" e_stop="65978"/>
            <exon e_start="66168" e_stop="66427"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.978" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.891" e_score="1.000"/>
          <exon-intron don_prob="0.976" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.959" e_score="1.000"/>
          <exon-intron don_prob="0.964" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.924" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.894" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.996" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="60855" e_stop="61036" e_length="182"/>
          </exon>
          <intron i_serial="1" don_prob="0.978" acc_prob="0.998">
            <gDNA_intron_boundary i_start="61037" i_stop="61843" i_length="807"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="61844" e_stop="61932" e_length="89"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="1.000">
            <gDNA_intron_boundary i_start="61933" i_stop="62114" i_length="182"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="62115" e_stop="62218" e_length="104"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.891">
            <gDNA_intron_boundary i_start="62219" i_stop="62489" i_length="271"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="62490" e_stop="62606" e_length="117"/>
          </exon>
          <intron i_serial="4" don_prob="0.976" acc_prob="1.000">
            <gDNA_intron_boundary i_start="62607" i_stop="64224" i_length="1618"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="64225" e_stop="64334" e_length="110"/>
          </exon>
          <intron i_serial="5" don_prob="0.000" acc_prob="0.959">
            <gDNA_intron_boundary i_start="64335" i_stop="64413" i_length="79"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="64414" e_stop="64519" e_length="106"/>
          </exon>
          <intron i_serial="6" don_prob="0.964" acc_prob="0.994">
            <gDNA_intron_boundary i_start="64520" i_stop="64625" i_length="106"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="64626" e_stop="64712" e_length="87"/>
          </exon>
          <intron i_serial="7" don_prob="0.924" acc_prob="0.997">
            <gDNA_intron_boundary i_start="64713" i_stop="65261" i_length="549"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="65262" e_stop="65504" e_length="243"/>
          </exon>
          <intron i_serial="8" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="65505" i_stop="65617" i_length="113"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="65618" e_stop="65743" e_length="126"/>
          </exon>
          <intron i_serial="9" don_prob="0.894" acc_prob="0.985">
            <gDNA_intron_boundary i_start="65744" i_stop="65816" i_length="73"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="65817" e_stop="65978" e_length="162"/>
          </exon>
          <intron i_serial="10" don_prob="1.000" acc_prob="0.996">
            <gDNA_intron_boundary i_start="65979" i_stop="66167" i_length="189"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="66168" e_stop="66427" e_length="260"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60855" stop="61036"/>
              <exon start="61844" stop="61932"/>
              <exon start="62115" stop="62218"/>
              <exon start="62490" stop="62606"/>
              <exon start="64225" stop="64334"/>
              <exon start="64414" stop="64519"/>
              <exon start="64626" stop="64712"/>
              <exon start="65262" stop="65504"/>
              <exon start="65618" stop="65743"/>
              <exon start="65817" stop="65978"/>
              <exon start="66168" stop="66427"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U562909" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAGTGCCGTGGCGTTGTTCGCTTGCTTTTATAAGCCTTTGCAGCAAGCAGCCATGGCGGCGCCTCCTCCTTCTATTACATTCTCATTTCCAGTTCCCCATGCAATCATGATGAAATCTATGTCAATCTTATCCTTCATTCTTCTTCTTTCACCTTTGTTCGCCATGGCTAACACATCATTTG : GTGCTGAAAATACAGAAGGCATAAAGTATGATCTTTTCCCTGAAATCCTCAAGGAGGAAGCTGTAGGAAGACTTAATGAGCTTGGAAAG : GTAAGTGATGCAAATGGCTACCTAGAGAGGACCTTCCAGAGCCCTGCATCGGTCAGAGCAGGAAATCTTCTTCGTGCATGGATGGAAGATGCAGGCTTGAAAAC : GATACAGTTATTGATGCTGGATTCTTTGATGGTTCATTGGGCATAATTTGTGCAATATCTGCATTGAAGGCACTGAATTCCTCTGGAAGGTTGGGTAAACTCCGGCGGCCAGTTGAG : GTAATCGCATTTAGTGATGAGGAGGGAGTAAGGTTTCAGTCAACCTTCTTGGGTAGTGCAGCTATTGCTGGCATATTACCAGTTTCAGCGTTGCAAGTACATGATAAGAA : TGGTGTGACAGTGCAAGGTGCTCTGAGAGCAAGTTCTATAGAGACTACAGAAGAAAACCTTTTGCAGCTCAAATATGAACCAGAATCTGTTTGGGGCTATGTTGAG : GTTCACATTGAACAGGGACCTGTACTGGAGAATGTCGGTCTCCCTCTTGGTTCAGTAAAAGGCATTGCAGGGCAGACAAGATTGAAG : GTGACAGTGAAAGGCACACAAGGACATGCAGGGACAGTACCCATGAATATGCGACAGGATCCTATGGTTGCAGCTGCTGAACTAATTGTATTTCTGGAAAGTCTTTGTAAACAACCTGACTATTATCTGTCATATGATGGTCAATGCACATCTTCAACAGTGGAATCTCTTGCAGGATCTCTGGTCTGTACTGTTGGAGAGATATCAACTTGGCCAAGTGCAAGTAATGTCATTCCAGGCCAG : GTCACATTCACCGTAGATGTACGTGCGATGGATGACTTAGGACGAGAAGCTATAATTTATGAATTCTCTAATAGACTCTACCATATGTGTGATAGGCGTTCTGTCTTCTGTAACGTTGAGAGAAAG : CATGATGCAAATGCTGTGGTTTGCGATCCTAGCCTGAGTAGACAGCTAAAATCTGCATCTTATACTGCTTTGAAAAGAATAACTGATGAGGATCCAGGTGATGTTCCTGTACTGATGAGTGGAGCAGGACATGATGCAATGGCCATGTCTCATCTAACCAAG : GTGGGAATGCTATTTGTGCGTTGTCGCGGAGGCATCAGCCATTCTCCAGCAGAACATGTATTGGATGATGATGTTTGGGCAGCTGGAATGGCTGTCCTTGCATTTTTGGAGACACTCTTGTAATTGTTGGCATTTTGCAATGCAAACTAGTAGGCTAGTTTGCTATTCATAATCCCATTTTTGTATATATATGTATCCATTCAATTTCTATAGTTGTAGTAATGAGAATGTATATTTGCAATAAAACAAGTTGACCTGTT</gDNA_template>
            <first_frame> E  C  R  G  V  V  R  L  L  L  *  A  F  A  A  S  S  H  G  G  A  S  S  F  Y  Y  I  L  I  S  S  S  P  C  N  H  D  E  I  Y  V  N  L  I  L  H  S  S  S  F  T  F  V  R  H  G  *  H  I  I  W :   C  *  K  Y  R  R  H  K  V  *  S  F  P  *  N  P  Q  G  G  S  C  R  K  T  *  *  A  W  K   : G  K  *  C  K  W  L  P  R  E  D  L  P  E  P  C  I  G  Q  S  R  K  S  S  S  C  M  D  G  R  C  R  L  E  N  :  D  T  V  I  D  A  G  F  F  D  G  S  L  G  I  I  C  A  I  S  A  L  K  A  L  N  S  S  G  R  L  G  K  L  R  R  P  V  E  :  V  I  A  F  S  D  E  E  G  V  R  F  Q  S  T  F  L  G  S  A  A  I  A  G  I  L  P  V  S  A  L  Q  V  H  D  K  N :   G  V  T  V  Q  G  A  L  R  A  S  S  I  E  T  T  E  E  N  L  L  Q  L  K  Y  E  P  E  S  V  W  G  Y  V  E  :  V  H  I  E  Q  G  P  V  L  E  N  V  G  L  P  L  G  S  V  K  G  I  A  G  Q  T  R  L  K  :  V  T  V  K  G  T  Q  G  H  A  G  T  V  P  M  N  M  R  Q  D  P  M  V  A  A  A  E  L  I  V  F  L  E  S  L  C  K  Q  P  D  Y  Y  L  S  Y  D  G  Q  C  T  S  S  T  V  E  S  L  A  G  S  L  V  C  T  V  G  E  I  S  T  W  P  S  A  S  N  V  I  P  G  Q  :  V  T  F  T  V  D  V  R  A  M  D  D  L  G  R  E  A  I  I  Y  E  F  S  N  R  L  Y  H  M  C  D  R  R  S  V  F  C  N  V  E  R  K  :  H  D  A  N  A  V  V  C  D  P  S  L  S  R  Q  L  K  S  A  S  Y  T  A  L  K  R  I  T  D  E  D  P  G  D  V  P  V  L  M  S  G  A  G  H  D  A  M  A  M  S  H  L  T  K  :  V  G  M  L  F  V  R  C  R  G  G  I  S  H  S  P  A  E  H  V  L  D  D  D  V  W  A  A  G  M  A  V  L  A  F  L  E  T  L  L  *  L  L  A  F  C  N  A  N  *  *  A  S  L  L  F  I  I  P  F  L  Y  I  Y  V  S  I  Q  F  L  *  L  *  *  *  E  C  I  F  A  I  K  Q  V  D  L   </first_frame>
            <second_frame>  S  A  V  A  L  F  A  C  F  Y  K  P  L  Q  Q  A  A  M  A  A  P  P  P  S  I  T  F  S  F  P  V  P  H  A  I  M  M  K  S  M  S  I  L  S  F  I  L  L  L  S  P  L  F  A  M  A  N  T  S  F   : G  A  E  N  T  E  G  I  K  Y  D  L  F  P  E  I  L  K  E  E  A  V  G  R  L  N  E  L  G  K  :  V  S  D  A  N  G  Y  L  E  R  T  F  Q  S  P  A  S  V  R  A  G  N  L  L  R  A  W  M  E  D  A  G  L  K  T :   I  Q  L  L  M  L  D  S  L  M  V  H  W  A  *  F  V  Q  Y  L  H  *  R  H  *  I  P  L  E  G  W  V  N  S  G  G  Q  L  R :   *  S  H  L  V  M  R  R  E  *  G  F  S  Q  P  S  W  V  V  Q  L  L  L  A  Y  Y  Q  F  Q  R  C  K  Y  M  I  R   : M  V  *  Q  C  K  V  L  *  E  Q  V  L  *  R  L  Q  K  K  T  F  C  S  S  N  M  N  Q  N  L  F  G  A  M  L  R :   F  T  L  N  R  D  L  Y  W  R  M  S  V  S  L  L  V  Q  *  K  A  L  Q  G  R  Q  D  *  R :   *  Q  *  K  A  H  K  D  M  Q  G  Q  Y  P  *  I  C  D  R  I  L  W  L  Q  L  L  N  *  L  Y  F  W  K  V  F  V  N  N  L  T  I  I  C  H  M  M  V  N  A  H  L  Q  Q  W  N  L  L  Q  D  L  W  S  V  L  L  E  R  Y  Q  L  G  Q  V  Q  V  M  S  F  Q  A  R :   S  H  S  P  *  M  Y  V  R  W  M  T  *  D  E  K  L  *  F  M  N  S  L  I  D  S  T  I  C  V  I  G  V  L  S  S  V  T  L  R  E  S :   M  M  Q  M  L  W  F  A  I  L  A  *  V  D  S  *  N  L  H  L  I  L  L  *  K  E  *  L  M  R  I  Q  V  M  F  L  Y  *  *  V  E  Q  D  M  M  Q  W  P  C  L  I  *  P  R :   W  E  C  Y  L  C  V  V  A  E  A  S  A  I  L  Q  Q  N  M  Y  W  M  M  M  F  G  Q  L  E  W  L  S  L  H  F  W  R  H  S  C  N  C  W  H  F  A  M  Q  T  S  R  L  V  C  Y  S  *  S  H  F  C  I  Y  M  Y  P  F  N  F  Y  S  C  S  N  E  N  V  Y  L  Q  *  N  K  L  T  C  </second_frame>
            <third_frame>   V  P  W  R  C  S  L  A  F  I  S  L  C  S  K  Q  P  W  R  R  L  L  L  L  L  H  S  H  F  Q  F  P  M  Q  S  *  *  N  L  C  Q  S  Y  P  S  F  F  F  F  H  L  C  S  P  W  L  T  H  H  L  :  V  L  K  I  Q  K  A  *  S  M  I  F  S  L  K  S  S  R  R  K  L  *  E  D  L  M  S  L  E  R :   *  V  M  Q  M  A  T  *  R  G  P  S  R  A  L  H  R  S  E  Q  E  I  F  F  V  H  G  W  K  M  Q  A  *  K   : R  Y  S  Y  *  C  W  I  L  *  W  F  I  G  H  N  L  C  N  I  C  I  E  G  T  E  F  L  W  K  V  G  *  T  P  A  A  S  *   : G  N  R  I  *  *  *  G  G  S  K  V  S  V  N  L  L  G  *  C  S  Y  C  W  H  I  T  S  F  S  V  A  S  T  *  *  E  :  W  C  D  S  A  R  C  S  E  S  K  F  Y  R  D  Y  R  R  K  P  F  A  A  Q  I  *  T  R  I  C  L  G  L  C  *   : G  S  H  *  T  G  T  C  T  G  E  C  R  S  P  S  W  F  S  K  R  H  C  R  A  D  K  I  E   : G  D  S  E  R  H  T  R  T  C  R  D  S  T  H  E  Y  A  T  G  S  Y  G  C  S  C  *  T  N  C  I  S  G  K  S  L  *  T  T  *  L  L  S  V  I  *  W  S  M  H  I  F  N  S  G  I  S  C  R  I  S  G  L  Y  C  W  R  D  I  N  L  A  K  C  K  *  C  H  S  R  P   : G  H  I  H  R  R  C  T  C  D  G  *  L  R  T  R  S  Y  N  L  *  I  L  *  *  T  L  P  Y  V  *  *  A  F  C  L  L  *  R  *  E  K   : A  *  C  K  C  C  G  L  R  S  *  P  E  *  T  A  K  I  C  I  L  Y  C  F  E  K  N  N  *  *  G  S  R  *  C  S  C  T  D  E  W  S  R  T  *  C  N  G  H  V  S  S  N  Q   : G  G  N  A  I  C  A  L  S  R  R  H  Q  P  F  S  S  R  T  C  I  G  *  *  C  L  G  S  W  N  G  C  P  C  I  F  G  D  T  L  V  I  V  G  I  L  Q  C  K  L  V  G  *  F  A  I  H  N  P  I  F  V  Y  I  C  I  H  S  I  S  I  V  V  V  M  R  M  Y  I  C  N  K  T  S  *  P  V </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0020J02.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="62123" stop="62218"/>
                    <exon start="62490" stop="62606"/>
                    <exon start="64225" stop="64334"/>
                    <exon start="64414" stop="64519"/>
                    <exon start="64626" stop="64712"/>
                    <exon start="65262" stop="65504"/>
                    <exon start="65618" stop="65743"/>
                    <exon start="65817" stop="65978"/>
                    <exon start="66168" stop="66290"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1167</number_coding_nucleotides>
                  <number_encoded_amino_acids>389</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CKWLPREDLPEPCIGQSRKSSSCMDGRCRLENDTVIDAGFFDGSLGIICAISALKALNSSGRLGKLRRPVEVIAFSDEEGVRFQSTFLGSAAIAGILPVSALQVHDKNGVTVQGALRASSIETTEENLLQLKYEPESVWGYVEVHIEQGPVLENVGLPLGSVKGIAGQTRLKVTVKGTQGHAGTVPMNMRQDPMVAAAELIVFLESLCKQPDYYLSYDGQCTSSTVESLAGSLVCTVGEISTWPSASNVIPGQVTFTVDVRAMDDLGREAIIYEFSNRLYHMCDRRSVFCNVERKHDANAVVCDPSLSRQLKSASYTALKRITDEDPGDVPVLMSGAGHDAMAMSHLTKVGMLFVRCRGGISHSPAEHVLDDDVWAAGMAVLAFLETLL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="73308" PGL_stop="68339"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="73308" e_stop="73007"/>
            <exon e_start="72874" e_stop="72820"/>
            <exon e_start="71830" e_stop="71411"/>
            <exon e_start="71162" e_stop="70604"/>
            <exon e_start="69112" e_stop="68339"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.417" acc_prob="0.999" e_score="0.987"/>
          <exon-intron don_prob="0.985" acc_prob="0.938" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.997" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.987">
            <gDNA_exon_boundary e_start="73308" e_stop="73007" e_length="302"/>
          </exon>
          <intron i_serial="1" don_prob="0.417" acc_prob="0.999">
            <gDNA_intron_boundary i_start="73006" i_stop="72875" i_length="132"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="72874" e_stop="72820" e_length="55"/>
          </exon>
          <intron i_serial="2" don_prob="0.985" acc_prob="0.938">
            <gDNA_intron_boundary i_start="72819" i_stop="71831" i_length="989"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="71830" e_stop="71411" e_length="420"/>
          </exon>
          <intron i_serial="3" don_prob="0.997" acc_prob="0.992">
            <gDNA_intron_boundary i_start="71410" i_stop="71163" i_length="248"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="71162" e_stop="70604" e_length="559"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="0.997">
            <gDNA_intron_boundary i_start="70603" i_stop="69113" i_length="1491"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="69112" e_stop="68339" e_length="774"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73308" stop="73007"/>
              <exon start="72874" stop="72820"/>
              <exon start="71830" stop="71411"/>
              <exon start="71162" stop="70604"/>
              <exon start="69112" stop="68339"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U566752" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68712" stop="68378"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U594400" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAAGTCATTAAAAATGGTGGGGACAAACATAAGGTGAGAAATTAACTACTCTGTCTGAACAAACACTTTCTTCTTCAAAGAAAATTCAACTAACCATTGGAGACTCCAAATGTGAACTCTTTACTCTTCTTTTTTTTTTTTTTCCATCTAAACGAAAAACCCTATCCACAATGCCCAACCCCACACTCAAAATTAGTCTAGGTTTTGCTATACAGTGAGAACAAGTGATGATGGCTGTTAAACTTCCGTTCCCTTTGTTTCTACTTTCTTGTTTTCTGCTTCACCTCTGTGCTTCTACTTCT : GTTTCTAATAAGACACAAGTAGTTTCCTCTGCTGGGAATCAAAGTCATGATGATG : GAAGATGTGATCCTGGTTGGTTTAACGGCCCAAAAGGGAAAAAGTGCTTCAAATATTATGCTACGTCTTTGCAATGGAATGAATCAGAGACTTACTGCAATGGTTTTGGAGGAAACCTGGCTGCCATAACATCTTCAGAAGAACTGAACTTTGTCCAGAAGCTCTGTGGCAATGATAGTAACGGATGCTGGGTTGGTGGAAGGAGCATCAATATCACAGCTGGGTTGGGTTGGAAATGGTCTGATAATGCTTCTAGCTGGAATGAGAGTATTGCTCCTAAGACAACTTTGGACTCAAGTTGCAAAAATTTCTCATGCTATGGCTTTAAGTCGGTGGATTTGTGTACATCGATAATCAGTGGTGCTATTATAGCTGAGAGATGCAATGTAACTCATGCTTCTATATGCACACTTGATGCTG : GGAGCAAGTGTCGCCATATGCGGTGCCACAGGGAGTATCTCATTATTCTTGCAGTTGTTAGTGGGTTGATCCTTTGCACTACTTTGGCTATTGTGATATGGCTTCTTGTATTTAGGCGAAGTAAAAGACGCAAAAGATCATTGCGTGCTTCATTAGCATTAGTTCCCCCGTCTTGGAAAATTTTCAGTCGTGATGAAGTAAAGTCCATGACAAAGAATTTCAGTGAAGCAAATCGTCTCCTTGGGGACGCCAAAACAGGTGGTACCTATAGTGGGCTTTTACCTGATGGTTCAAGGGTGGCTGTGAAAAGATTGAAGAGGTGCGGTATTCAGAGGAAGAAAGAGTTCTACTCTGAGATTGGAAGGGTTGCAAGACTTCATCATTCAAATCTGGTATCTATCAAAGGATGTTGCTATCATCATGGTGACCGCTATATTCTGTACGAGTTCATCATCAATGGACCCCTGGATAGGTGGCTACACCATATTCCTAGAGGAGGTAGGAGTTTGGACTGGAGCATGAGAATGAAGGTCGCCACCACCCTTGCTCAAGGGATTGC : GTTTCTTCATGACAAAATGAAGCCACAAGTTGTGCATAGGGATATCCGTGCAAGCAATGTCCTTCTTGACGAAGAATTTGGCGCCCATCTAATGGGAGTTGGTCTGTCTAAGTTTGTGCCATGGGAAATCATGCACGAGAGGAGAGTCATGGCAGGTGGTACTCATGGGTATCTTGCTCCGGAGTTTGTTTACAGAAATGAGCTTACTACAAAGAGTGACGTCTACAGCTTTGGAGTCCTCTTGCTTGAAATAATTAGTGGACGAAGACCAGCACAGGCAGTAGATTCTGTTGGATGGCAAAGTATATTTGAATGGGCCACGCCTCTGGTGCAAGCTCATCGATATGTTGAACTCTTGGATCCTCTCATATCATCTTCTTCCTCTTCTCAGATTCCTGAAGTTGGAGTCATCCAAAAAGTTGTTGATCTTGTTTATTCTTGTACACAACATGTACCATCAATGCGTCCGAGGATGTCACACGTCGTCCATCAGCTACAACAATTAGCTCAGCCTCCTATTGTAAAGTAAGTGGATAAGAGTTATAGATCAGCATTTCTTTTGACTGAAACCAGCCTGCAATCTTTTATCCTAGTTACAAGGGCTAACTGTATTAGGCATTTATTTTTTAAAACTTGCCAATGACATGCAAGGCCTTGAGCCTTGAACCAGTCCATGATGGTTTGAGATGTTATACAACAACTAATTTGTATTACCAAAGCCAGTATGTTTTCATCTGCTGCTGCTGCTTTGCATTGTTTACTTGTAACACCTAT</gDNA_template>
            <first_frame> E  V  I  K  N  G  G  D  K  H  K  V  R  N  *  L  L  C  L  N  K  H  F  L  L  Q  R  K  F  N  *  P  L  E  T  P  N  V  N  S  L  L  F  F  F  F  F  F  H  L  N  E  K  P  Y  P  Q  C  P  T  P  H  S  K  L  V  *  V  L  L  Y  S  E  N  K  *  *  W  L  L  N  F  R  S  L  C  F  Y  F  L  V  F  C  F  T  S  V  L  L  L  L :   F  L  I  R  H  K  *  F  P  L  L  G  I  K  V  M  M  M  :  E  D  V  I  L  V  G  L  T  A  Q  K  G  K  S  A  S  N  I  M  L  R  L  C  N  G  M  N  Q  R  L  T  A  M  V  L  E  E  T  W  L  P  *  H  L  Q  K  N  *  T  L  S  R  S  S  V  A  M  I  V  T  D  A  G  L  V  E  G  A  S  I  S  Q  L  G  W  V  G  N  G  L  I  M  L  L  A  G  M  R  V  L  L  L  R  Q  L  W  T  Q  V  A  K  I  S  H  A  M  A  L  S  R  W  I  C  V  H  R  *  S  V  V  L  L  *  L  R  D  A  M  *  L  M  L  L  Y  A  H  L  M  L  :  G  A  S  V  A  I  C  G  A  T  G  S  I  S  L  F  L  Q  L  L  V  G  *  S  F  A  L  L  W  L  L  *  Y  G  F  L  Y  L  G  E  V  K  D  A  K  D  H  C  V  L  H  *  H  *  F  P  R  L  G  K  F  S  V  V  M  K  *  S  P  *  Q  R  I  S  V  K  Q  I  V  S  L  G  T  P  K  Q  V  V  P  I  V  G  F  Y  L  M  V  Q  G  W  L  *  K  D  *  R  G  A  V  F  R  G  R  K  S  S  T  L  R  L  E  G  L  Q  D  F  I  I  Q  I  W  Y  L  S  K  D  V  A  I  I  M  V  T  A  I  F  C  T  S  S  S  S  M  D  P  W  I  G  G  Y  T  I  F  L  E  E  V  G  V  W  T  G  A  *  E  *  R  S  P  P  P  L  L  K  G  L   : R  F  F  M  T  K  *  S  H  K  L  C  I  G  I  S  V  Q  A  M  S  F  L  T  K  N  L  A  P  I  *  W  E  L  V  C  L  S  L  C  H  G  K  S  C  T  R  G  E  S  W  Q  V  V  L  M  G  I  L  L  R  S  L  F  T  E  M  S  L  L  Q  R  V  T  S  T  A  L  E  S  S  C  L  K  *  L  V  D  E  D  Q  H  R  Q  *  I  L  L  D  G  K  V  Y  L  N  G  P  R  L  W  C  K  L  I  D  M  L  N  S  W  I  L  S  Y  H  L  L  P  L  L  R  F  L  K  L  E  S  S  K  K  L  L  I  L  F  I  L  V  H  N  M  Y  H  Q  C  V  R  G  C  H  T  S  S  I  S  Y  N  N  *  L  S  L  L  L  *  S  K  W  I  R  V  I  D  Q  H  F  F  *  L  K  P  A  C  N  L  L  S  *  L  Q  G  L  T  V  L  G  I  Y  F  L  K  L  A  N  D  M  Q  G  L  E  P  *  T  S  P  *  W  F  E  M  L  Y  N  N  *  F  V  L  P  K  P  V  C  F  H  L  L  L  L  L  C  I  V  Y  L  *  H  L  </first_frame>
            <second_frame>  K  S  L  K  M  V  G  T  N  I  R  *  E  I  N  Y  S  V  *  T  N  T  F  F  F  K  E  N  S  T  N  H  W  R  L  Q  M  *  T  L  Y  S  S  F  F  F  F  S  I  *  T  K  N  P  I  H  N  A  Q  P  H  T  Q  N  *  S  R  F  C  Y  T  V  R  T  S  D  D  G  C  *  T  S  V  P  F  V  S  T  F  L  F  S  A  S  P  L  C  F  Y  F   : C  F  *  *  D  T  S  S  F  L  C  W  E  S  K  S  *  *  W :   K  M  *  S  W  L  V  *  R  P  K  R  E  K  V  L  Q  I  L  C  Y  V  F  A  M  E  *  I  R  D  L  L  Q  W  F  W  R  K  P  G  C  H  N  I  F  R  R  T  E  L  C  P  E  A  L  W  Q  *  *  *  R  M  L  G  W  W  K  E  H  Q  Y  H  S  W  V  G  L  E  M  V  *  *  C  F  *  L  E  *  E  Y  C  S  *  D  N  F  G  L  K  L  Q  K  F  L  M  L  W  L  *  V  G  G  F  V  Y  I  D  N  Q  W  C  Y  Y  S  *  E  M  Q  C  N  S  C  F  Y  M  H  T  *  C  W :   E  Q  V  S  P  Y  A  V  P  Q  G  V  S  H  Y  S  C  S  C  *  W  V  D  P  L  H  Y  F  G  Y  C  D  M  A  S  C  I  *  A  K  *  K  T  Q  K  I  I  A  C  F  I  S  I  S  S  P  V  L  E  N  F  Q  S  *  *  S  K  V  H  D  K  E  F  Q  *  S  K  S  S  P  W  G  R  Q  N  R  W  Y  L  *  W  A  F  T  *  W  F  K  G  G  C  E  K  I  E  E  V  R  Y  S  E  E  E  R  V  L  L  *  D  W  K  G  C  K  T  S  S  F  K  S  G  I  Y  Q  R  M  L  L  S  S  W  *  P  L  Y  S  V  R  V  H  H  Q  W  T  P  G  *  V  A  T  P  Y  S  *  R  R  *  E  F  G  L  E  H  E  N  E  G  R  H  H  P  C  S  R  D  C  :  V  S  S  *  Q  N  E  A  T  S  C  A  *  G  Y  P  C  K  Q  C  P  S  *  R  R  I  W  R  P  S  N  G  S  W  S  V  *  V  C  A  M  G  N  H  A  R  E  E  S  H  G  R  W  Y  S  W  V  S  C  S  G  V  C  L  Q  K  *  A  Y  Y  K  E  *  R  L  Q  L  W  S  P  L  A  *  N  N  *  W  T  K  T  S  T  G  S  R  F  C  W  M  A  K  Y  I  *  M  G  H  A  S  G  A  S  S  S  I  C  *  T  L  G  S  S  H  I  I  F  F  L  F  S  D  S  *  S  W  S  H  P  K  S  C  *  S  C  L  F  L  Y  T  T  C  T  I  N  A  S  E  D  V  T  R  R  P  S  A  T  T  I  S  S  A  S  Y  C  K  V  S  G  *  E  L  *  I  S  I  S  F  D  *  N  Q  P  A  I  F  Y  P  S  Y  K  G  *  L  Y  *  A  F  I  F  *  N  L  P  M  T  C  K  A  L  S  L  E  P  V  H  D  G  L  R  C  Y  T  T  T  N  L  Y  Y  Q  S  Q  Y  V  F  I  C  C  C  C  F  A  L  F  T  C  N  T  Y </second_frame>
            <third_frame>   S  H  *  K  W  W  G  Q  T  *  G  E  K  L  T  T  L  S  E  Q  T  L  S  S  S  K  K  I  Q  L  T  I  G  D  S  K  C  E  L  F  T  L  L  F  F  F  F  P  S  K  R  K  T  L  S  T  M  P  N  P  T  L  K  I  S  L  G  F  A  I  Q  *  E  Q  V  M  M  A  V  K  L  P  F  P  L  F  L  L  S  C  F  L  L  H  L  C  A  S  T  S  :  V  S  N  K  T  Q  V  V  S  S  A  G  N  Q  S  H  D  D   : G  R  C  D  P  G  W  F  N  G  P  K  G  K  K  C  F  K  Y  Y  A  T  S  L  Q  W  N  E  S  E  T  Y  C  N  G  F  G  G  N  L  A  A  I  T  S  S  E  E  L  N  F  V  Q  K  L  C  G  N  D  S  N  G  C  W  V  G  G  R  S  I  N  I  T  A  G  L  G  W  K  W  S  D  N  A  S  S  W  N  E  S  I  A  P  K  T  T  L  D  S  S  C  K  N  F  S  C  Y  G  F  K  S  V  D  L  C  T  S  I  I  S  G  A  I  I  A  E  R  C  N  V  T  H  A  S  I  C  T  L  D  A   : G  S  K  C  R  H  M  R  C  H  R  E  Y  L  I  I  L  A  V  V  S  G  L  I  L  C  T  T  L  A  I  V  I  W  L  L  V  F  R  R  S  K  R  R  K  R  S  L  R  A  S  L  A  L  V  P  P  S  W  K  I  F  S  R  D  E  V  K  S  M  T  K  N  F  S  E  A  N  R  L  L  G  D  A  K  T  G  G  T  Y  S  G  L  L  P  D  G  S  R  V  A  V  K  R  L  K  R  C  G  I  Q  R  K  K  E  F  Y  S  E  I  G  R  V  A  R  L  H  H  S  N  L  V  S  I  K  G  C  C  Y  H  H  G  D  R  Y  I  L  Y  E  F  I  I  N  G  P  L  D  R  W  L  H  H  I  P  R  G  G  R  S  L  D  W  S  M  R  M  K  V  A  T  T  L  A  Q  G  I  A :   F  L  H  D  K  M  K  P  Q  V  V  H  R  D  I  R  A  S  N  V  L  L  D  E  E  F  G  A  H  L  M  G  V  G  L  S  K  F  V  P  W  E  I  M  H  E  R  R  V  M  A  G  G  T  H  G  Y  L  A  P  E  F  V  Y  R  N  E  L  T  T  K  S  D  V  Y  S  F  G  V  L  L  L  E  I  I  S  G  R  R  P  A  Q  A  V  D  S  V  G  W  Q  S  I  F  E  W  A  T  P  L  V  Q  A  H  R  Y  V  E  L  L  D  P  L  I  S  S  S  S  S  S  Q  I  P  E  V  G  V  I  Q  K  V  V  D  L  V  Y  S  C  T  Q  H  V  P  S  M  R  P  R  M  S  H  V  V  H  Q  L  Q  Q  L  A  Q  P  P  I  V  K  *  V  D  K  S  Y  R  S  A  F  L  L  T  E  T  S  L  Q  S  F  I  L  V  T  R  A  N  C  I  R  H  L  F  F  K  T  C  Q  *  H  A  R  P  *  A  L  N  Q  S  M  M  V  *  D  V  I  Q  Q  L  I  C  I  T  K  A  S  M  F  S  S  A  A  A  A  L  H  C  L  L  V  T  P   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0020J02.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="73090" stop="73007"/>
                    <exon start="72874" stop="72820"/>
                    <exon start="71830" stop="71411"/>
                    <exon start="71162" stop="70604"/>
                    <exon start="69112" stop="68584"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1644</number_coding_nucleotides>
                  <number_encoded_amino_acids>548</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EQVMMAVKLPFPLFLLSCFLLHLCASTSVSNKTQVVSSAGNQSHDDGRCDPGWFNGPKGKKCFKYYATSLQWNESETYCNGFGGNLAAITSSEELNFVQKLCGNDSNGCWVGGRSINITAGLGWKWSDNASSWNESIAPKTTLDSSCKNFSCYGFKSVDLCTSIISGAIIAERCNVTHASICTLDAGSKCRHMRCHREYLIILAVVSGLILCTTLAIVIWLLVFRRSKRRKRSLRASLALVPPSWKIFSRDEVKSMTKNFSEANRLLGDAKTGGTYSGLLPDGSRVAVKRLKRCGIQRKKEFYSEIGRVARLHHSNLVSIKGCCYHHGDRYILYEFIINGPLDRWLHHIPRGGRSLDWSMRMKVATTLAQGIAFLHDKMKPQVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPWEIMHERRVMAGGTHGYLAPEFVYRNELTTKSDVYSFGVLLLEIISGRRPAQAVDSVGWQSIFEWATPLVQAHRYVELLDPLISSSSSSQIPEVGVIQKVVDLVYSCTQHVPSMRPRMSHVVHQLQQLAQPPIVK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="74453" PGL_stop="77978"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="74453" e_stop="74724"/>
            <exon e_start="75016" e_stop="75163"/>
            <exon e_start="76315" e_stop="76400"/>
            <exon e_start="76715" e_stop="76852"/>
            <exon e_start="77475" e_stop="77978"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.495" acc_prob="0.930" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.719" acc_prob="0.986" e_score="1.000"/>
          <exon-only e_score="0.982"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="74453" e_stop="74724" e_length="272"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.990">
            <gDNA_intron_boundary i_start="74725" i_stop="75015" i_length="291"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="75016" e_stop="75163" e_length="148"/>
          </exon>
          <intron i_serial="2" don_prob="0.495" acc_prob="0.930">
            <gDNA_intron_boundary i_start="75164" i_stop="76314" i_length="1151"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="76315" e_stop="76400" e_length="86"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.000">
            <gDNA_intron_boundary i_start="76401" i_stop="76714" i_length="314"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="76715" e_stop="76852" e_length="138"/>
          </exon>
          <intron i_serial="4" don_prob="0.719" acc_prob="0.986">
            <gDNA_intron_boundary i_start="76853" i_stop="77474" i_length="622"/>
          </intron>
          <exon e_serial="5" e_score="0.982">
            <gDNA_exon_boundary e_start="77475" e_stop="77978" e_length="504"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="74453" stop="74724"/>
              <exon start="75016" stop="75163"/>
              <exon start="76315" stop="76400"/>
              <exon start="76715" stop="76852"/>
              <exon start="77475" stop="77978"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U575287" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTGCCCAATGAAAGGAGTTTATGCCGCCGGACTTTGACATCAGTGTGGAATTTTTGGGAAATGGGTGGCCGGACGATGGAATGGGCGGCGAGAGCAAACCACCTGGGGGGTATACCTCGGAAAGTGGTGATCACGGCGATAGGTACTTTCGCTAAGGCGGTGGCCAATCTATTGAACACCACCACCGTGCACAACGGCGACGTCCTTATCCGGCTAGTTCGATCCCGCCCAGCCGGCGTTCCTCTCCTCACCGTCAGCAATCACATGTCCAC : TTTAGATGACCCAGTTATGTGGGCATTCAAAGGTTTTCCAATTTGTGATGCAAAGCTGGCTCGATGGGTACTGGCAGCGGAAGACATATGCTTTAAAAATACAGTATTGTCATACTTTTTCCGGATCGGTGTGTAATCTGTTGGTCTG : GGAAATGTATACCAATAACAAGAGGGGGTGGAATATATCAAGAACATATGAACGAAGCTCTTGATCGTTTGACTGAAGGAGCCTGG : CTGCATACATTTCCAGAAGGGAAGGTCTGTCAAGAAGATGCTCCTATAAGACGATTGAAGTGGGGAACTGCCAGTCTCATTGCTCGTGCCCCCGTGACTCCAATTGTCTTGCCAATTATCCATCATGGTTTTGAAAAG : GTTATGCCTGAGAACTATGCTTTTGGGAGAAGACCTCCAGTCCCTTTATGGAACCAGGAGATAAAAATAGTTGTTGGTGAGCCAATGGAATTCAACCTTCCTGAACTGCGAGAGATGGCTCTATCTCAGTCTCGGGATTCATCATCTTCCAGTGGGCAGTGGCCAAGAAACATCCTCGGGGGATTGAACGAAGCAGCACAAAAATGTCTGTACATGACTATATCTGATCAAATCCGAACTACCTTGGAAAACTTAAGGAATTTTAGTAAATCTTATGCCAAGGCAGAGCAATAAAGTAGGCAATTTCCAAGCATTCAAAGATAAATTCATAAGTTGCATCTGTTTTGAAGGTCTTGTAACTTTTCATTTCAAGATTTTGTTAGTTTGAGGGTAGACTTCTCATCCCCTTAATTGAGGACACGGGGTAATATTTTCCCAGTATCATCCTTGTAGCTGCATTTTTTTGCATTTTGAAATGAAAGATTTCACATCAATTCTTGAAAA</gDNA_template>
            <first_frame> V  P  N  E  R  S  L  C  R  R  T  L  T  S  V  W  N  F  W  E  M  G  G  R  T  M  E  W  A  A  R  A  N  H  L  G  G  I  P  R  K  V  V  I  T  A  I  G  T  F  A  K  A  V  A  N  L  L  N  T  T  T  V  H  N  G  D  V  L  I  R  L  V  R  S  R  P  A  G  V  P  L  L  T  V  S  N  H  M  S  T :   L  D  D  P  V  M  W  A  F  K  G  F  P  I  C  D  A  K  L  A  R  W  V  L  A  A  E  D  I  C  F  K  N  T  V  L  S  Y  F  F  R  I  G  V  *  S  V  G  L  :  G  N  V  Y  Q  *  Q  E  G  V  E  Y  I  K  N  I  *  T  K  L  L  I  V  *  L  K  E  P  G :   C  I  H  F  Q  K  G  R  S  V  K  K  M  L  L  *  D  D  *  S  G  E  L  P  V  S  L  L  V  P  P  *  L  Q  L  S  C  Q  L  S  I  M  V  L  K  R :   L  C  L  R  T  M  L  L  G  E  D  L  Q  S  L  Y  G  T  R  R  *  K  *  L  L  V  S  Q  W  N  S  T  F  L  N  C  E  R  W  L  Y  L  S  L  G  I  H  H  L  P  V  G  S  G  Q  E  T  S  S  G  D  *  T  K  Q  H  K  N  V  C  T  *  L  Y  L  I  K  S  E  L  P  W  K  T  *  G  I  L  V  N  L  M  P  R  Q  S  N  K  V  G  N  F  Q  A  F  K  D  K  F  I  S  C  I  C  F  E  G  L  V  T  F  H  F  K  I  L  L  V  *  G  *  T  S  H  P  L  N  *  G  H  G  V  I  F  S  Q  Y  H  P  C  S  C  I  F  L  H  F  E  M  K  D  F  T  S  I  L  E   </first_frame>
            <second_frame>  C  P  M  K  G  V  Y  A  A  G  L  *  H  Q  C  G  I  F  G  K  W  V  A  G  R  W  N  G  R  R  E  Q  T  T  W  G  V  Y  L  G  K  W  *  S  R  R  *  V  L  S  L  R  R  W  P  I  Y  *  T  P  P  P  C  T  T  A  T  S  L  S  G  *  F  D  P  A  Q  P  A  F  L  S  S  P  S  A  I  T  C  P   : L  *  M  T  Q  L  C  G  H  S  K  V  F  Q  F  V  M  Q  S  W  L  D  G  Y  W  Q  R  K  T  Y  A  L  K  I  Q  Y  C  H  T  F  S  G  S  V  C  N  L  L  V  W :   E  M  Y  T  N  N  K  R  G  W  N  I  S  R  T  Y  E  R  S  S  *  S  F  D  *  R  S  L   : A  A  Y  I  S  R  R  E  G  L  S  R  R  C  S  Y  K  T  I  E  V  G  N  C  Q  S  H  C  S  C  P  R  D  S  N  C  L  A  N  Y  P  S  W  F  *  K   : G  Y  A  *  E  L  C  F  W  E  K  T  S  S  P  F  M  E  P  G  D  K  N  S  C  W  *  A  N  G  I  Q  P  S  *  T  A  R  D  G  S  I  S  V  S  G  F  I  I  F  Q  W  A  V  A  K  K  H  P  R  G  I  E  R  S  S  T  K  M  S  V  H  D  Y  I  *  S  N  P  N  Y  L  G  K  L  K  E  F  *  *  I  L  C  Q  G  R  A  I  K  *  A  I  S  K  H  S  K  I  N  S  *  V  A  S  V  L  K  V  L  *  L  F  I  S  R  F  C  *  F  E  G  R  L  L  I  P  L  I  E  D  T  G  *  Y  F  P  S  I  I  L  V  A  A  F  F  C  I  L  K  *  K  I  S  H  Q  F  L  K  </second_frame>
            <third_frame>   A  Q  *  K  E  F  M  P  P  D  F  D  I  S  V  E  F  L  G  N  G  W  P  D  D  G  M  G  G  E  S  K  P  P  G  G  Y  T  S  E  S  G  D  H  G  D  R  Y  F  R  *  G  G  G  Q  S  I  E  H  H  H  R  A  Q  R  R  R  P  Y  P  A  S  S  I  P  P  S  R  R  S  S  P  H  R  Q  Q  S  H  V  H  :  F  R  *  P  S  Y  V  G  I  Q  R  F  S  N  L  *  C  K  A  G  S  M  G  T  G  S  G  R  H  M  L  *  K  Y  S  I  V  I  L  F  P  D  R  C  V  I  C  W  S   : G  K  C  I  P  I  T  R  G  G  G  I  Y  Q  E  H  M  N  E  A  L  D  R  L  T  E  G  A  W  :  L  H  T  F  P  E  G  K  V  C  Q  E  D  A  P  I  R  R  L  K  W  G  T  A  S  L  I  A  R  A  P  V  T  P  I  V  L  P  I  I  H  H  G  F  E  K  :  V  M  P  E  N  Y  A  F  G  R  R  P  P  V  P  L  W  N  Q  E  I  K  I  V  V  G  E  P  M  E  F  N  L  P  E  L  R  E  M  A  L  S  Q  S  R  D  S  S  S  S  S  G  Q  W  P  R  N  I  L  G  G  L  N  E  A  A  Q  K  C  L  Y  M  T  I  S  D  Q  I  R  T  T  L  E  N  L  R  N  F  S  K  S  Y  A  K  A  E  Q  *  S  R  Q  F  P  S  I  Q  R  *  I  H  K  L  H  L  F  *  R  S  C  N  F  S  F  Q  D  F  V  S  L  R  V  D  F  S  S  P  *  L  R  T  R  G  N  I  F  P  V  S  S  L  *  L  H  F  F  A  F  *  N  E  R  F  H  I  N  S  *  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0020J02.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="75112" stop="75163"/>
                    <exon start="76315" stop="76400"/>
                    <exon start="76715" stop="76852"/>
                    <exon start="77475" stop="77768"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>567</number_coding_nucleotides>
                  <number_encoded_amino_acids>189</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KYSIVILFPDRCVICWSGKCIPITRGGGIYQEHMNEALDRLTEGAWLHTFPEGKVCQEDAPIRRLKWGTASLIARAPVTPIVLPIIHHGFEKVMPENYAFGRRPPVPLWNQEIKIVVGEPMEFNLPELREMALSQSRDSSSSSGQWPRNILGGLNEAAQKCLYMTISDQIRTTLENLRNFSKSYAKAEQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="78341" PGL_stop="79474"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="78341" e_stop="79474"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="78341" e_stop="79474" e_length="1134"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="78341" stop="79474"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U579169" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTCCGCTATTCCCTTTTCCAGTTCCCAGCCCTGAAAACAGTAGAAGAAACTGTGTCATCGCTTTTACCACTCCCCAAAACTACGCACCAAGATTATCTGAACTCATACATCTCAAAGGATGGACACCCCTTTGGTGTCCTACCGTCATTGTTGAATCTACGGAACAAACAATCTCTTCCATTCATCACTACCTCAACCCACAAGCTGGTATCGATGAACCCAATTCGTTTCTTGAAGAATTTTCAGCTCTAGCGTTCACTTCAAGAACTGGGATTACTGCTTTTTCACAAGCTTTATCTATGAACCCCACACCCCCATTAACCCCAAATGGAGAAATTCTCACAATTGCAGCTTTGGGTAATGATGCTGAGCTTCTGGATCGAGATTTCATTCGAAAAATGTGTGAAAACCCTGAAAGAATTCGAGTTTTGGTTCCTTCAGTTGCAACCCCATCTGGGTTAGTGGAGGCATTAGGATTAGGTCAAGGAAGAAAAGTGTTATGCCCAGTTCCATTAGTGATTGGGTTGAATGAACCACCTGTTGTGCCGAAATTCCTTGATGATTTATCGAAAAGGGGGTGGATTCCATTGAGATTAGACGCGTATGAGACGCGATGGGCAGGGGCGACATGCGCTGTGGATGTGGTGGCAAAGAGTGAAGAAGAGTGTGGATTTGATGCAATTGTGTTTACTAGTACTGGAGAAGTGGAAGGTTTGTTGAAGAGTTTGGAGGAATTTGGATTGGATTGGTCAATGGTGAGGAGGAGATGTCCAAGAATGGTGGTGGCAGCTCATGGCCCTGTTACAGCTGCTGGTGCTGAGAGTTTGGGTGTTGGCATTGATGTGGTAAGTTCAAATTTTGGTAGCTTTGATGGTGTGGTTGATGCATTAGCTCATAAATGGAAATCATTGCAAAATCAAGAATCTTGAAATTTGGTTTTTGCTCATCATTCAAAGTTTTGATTGGAGCTACAATTTGCTATTTATAGCCAAAACTTCTATAATTGTCTAGTTCACAGCATGTCTTTTTGTTTTGTACTAATTTGGAAAAGTTTTAGTAATTTTTGATGTTGTGAGTTACAAAGTTTTGATGTTTATATGGATGCAACATTTCTCATAAATGCAATCAATTGGA</gDNA_template>
            <first_frame> L  R  Y  S  L  F  Q  F  P  A  L  K  T  V  E  E  T  V  S  S  L  L  P  L  P  K  T  T  H  Q  D  Y  L  N  S  Y  I  S  K  D  G  H  P  F  G  V  L  P  S  L  L  N  L  R  N  K  Q  S  L  P  F  I  T  T  S  T  H  K  L  V  S  M  N  P  I  R  F  L  K  N  F  Q  L  *  R  S  L  Q  E  L  G  L  L  L  F  H  K  L  Y  L  *  T  P  H  P  H  *  P  Q  M  E  K  F  S  Q  L  Q  L  W  V  M  M  L  S  F  W  I  E  I  S  F  E  K  C  V  K  T  L  K  E  F  E  F  W  F  L  Q  L  Q  P  H  L  G  *  W  R  H  *  D  *  V  K  E  E  K  C  Y  A  Q  F  H  *  *  L  G  *  M  N  H  L  L  C  R  N  S  L  M  I  Y  R  K  G  G  G  F  H  *  D  *  T  R  M  R  R  D  G  Q  G  R  H  A  L  W  M  W  W  Q  R  V  K  K  S  V  D  L  M  Q  L  C  L  L  V  L  E  K  W  K  V  C  *  R  V  W  R  N  L  D  W  I  G  Q  W  *  G  G  D  V  Q  E  W  W  W  Q  L  M  A  L  L  Q  L  L  V  L  R  V  W  V  L  A  L  M  W  *  V  Q  I  L  V  A  L  M  V  W  L  M  H  *  L  I  N  G  N  H  C  K  I  K  N  L  E  I  W  F  L  L  I  I  Q  S  F  D  W  S  Y  N  L  L  F  I  A  K  T  S  I  I  V  *  F  T  A  C  L  F  V  L  Y  *  F  G  K  V  L  V  I  F  D  V  V  S  Y  K  V  L  M  F  I  W  M  Q  H  F  S  *  M  Q  S  I  G </first_frame>
            <second_frame>  S  A  I  P  F  S  S  S  Q  P  *  K  Q  *  K  K  L  C  H  R  F  Y  H  S  P  K  L  R  T  K  I  I  *  T  H  T  S  Q  R  M  D  T  P  L  V  S  Y  R  H  C  *  I  Y  G  T  N  N  L  F  H  S  S  L  P  Q  P  T  S  W  Y  R  *  T  Q  F  V  S  *  R  I  F  S  S  S  V  H  F  K  N  W  D  Y  C  F  F  T  S  F  I  Y  E  P  H  T  P  I  N  P  K  W  R  N  S  H  N  C  S  F  G  *  *  C  *  A  S  G  S  R  F  H  S  K  N  V  *  K  P  *  K  N  S  S  F  G  S  F  S  C  N  P  I  W  V  S  G  G  I  R  I  R  S  R  K  K  S  V  M  P  S  S  I  S  D  W  V  E  *  T  T  C  C  A  E  I  P  *  *  F  I  E  K  G  V  D  S  I  E  I  R  R  V  *  D  A  M  G  R  G  D  M  R  C  G  C  G  G  K  E  *  R  R  V  W  I  *  C  N  C  V  Y  *  Y  W  R  S  G  R  F  V  E  E  F  G  G  I  W  I  G  L  V  N  G  E  E  E  M  S  K  N  G  G  G  S  S  W  P  C  Y  S  C  W  C  *  E  F  G  C  W  H  *  C  G  K  F  K  F  W  *  L  *  W  C  G  *  C  I  S  S  *  M  E  I  I  A  K  S  R  I  L  K  F  G  F  C  S  S  F  K  V  L  I  G  A  T  I  C  Y  L  *  P  K  L  L  *  L  S  S  S  Q  H  V  F  L  F  C  T  N  L  E  K  F  *  *  F  L  M  L  *  V  T  K  F  *  C  L  Y  G  C  N  I  S  H  K  C  N  Q  L   </second_frame>
            <third_frame>   P  L  F  P  F  P  V  P  S  P  E  N  S  R  R  N  C  V  I  A  F  T  T  P  Q  N  Y  A  P  R  L  S  E  L  I  H  L  K  G  W  T  P  L  W  C  P  T  V  I  V  E  S  T  E  Q  T  I  S  S  I  H  H  Y  L  N  P  Q  A  G  I  D  E  P  N  S  F  L  E  E  F  S  A  L  A  F  T  S  R  T  G  I  T  A  F  S  Q  A  L  S  M  N  P  T  P  P  L  T  P  N  G  E  I  L  T  I  A  A  L  G  N  D  A  E  L  L  D  R  D  F  I  R  K  M  C  E  N  P  E  R  I  R  V  L  V  P  S  V  A  T  P  S  G  L  V  E  A  L  G  L  G  Q  G  R  K  V  L  C  P  V  P  L  V  I  G  L  N  E  P  P  V  V  P  K  F  L  D  D  L  S  K  R  G  W  I  P  L  R  L  D  A  Y  E  T  R  W  A  G  A  T  C  A  V  D  V  V  A  K  S  E  E  E  C  G  F  D  A  I  V  F  T  S  T  G  E  V  E  G  L  L  K  S  L  E  E  F  G  L  D  W  S  M  V  R  R  R  C  P  R  M  V  V  A  A  H  G  P  V  T  A  A  G  A  E  S  L  G  V  G  I  D  V  V  S  S  N  F  G  S  F  D  G  V  V  D  A  L  A  H  K  W  K  S  L  Q  N  Q  E  S  *  N  L  V  F  A  H  H  S  K  F  *  L  E  L  Q  F  A  I  Y  S  Q  N  F  Y  N  C  L  V  H  S  M  S  F  C  F  V  L  I  W  K  S  F  S  N  F  *  C  C  E  L  Q  S  F  D  V  Y  M  D  A  T  F  L  I  N  A  I  N  W  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0020J02.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="78343" stop="79269"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>924</number_coding_nucleotides>
                  <number_encoded_amino_acids>308</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PLFPFPVPSPENSRRNCVIAFTTPQNYAPRLSELIHLKGWTPLWCPTVIVESTEQTISSIHHYLNPQAGIDEPNSFLEEFSALAFTSRTGITAFSQALSMNPTPPLTPNGEILTIAALGNDAELLDRDFIRKMCENPERIRVLVPSVATPSGLVEALGLGQGRKVLCPVPLVIGLNEPPVVPKFLDDLSKRGWIPLRLDAYETRWAGATCAVDVVAKSEEECGFDAIVFTSTGEVEGLLKSLEEFGLDWSMVRRRCPRMVVAAHGPVTAAGAESLGVGIDVVSSNFGSFDGVVDALAHKWKSLQNQES*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="88429" PGL_stop="89154"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="88429" e_stop="89154"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.989"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.989">
            <gDNA_exon_boundary e_start="88429" e_stop="89154" e_length="726"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88429" stop="89154"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U602015" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATTAACATCTCTTTCTCTCTCTGGTACCGATCTTTCTTCTAAGTAAAGCTCCATTTTCAGCAGAAATTCAAAATGGGTTTCATCATATCCTCTTCGTATTCTCATATATTCTGAGATTTCCTATTTCTAATTTCTGAGCTTATGAACACCATTTTTGCTTAGCTACACGAAGCCCCAAAACAAGAGAACACAAACCCAGAGGTTTTTAGGCGTTTTATTATGAGTTACACCTCATACCATGCTGTTTTGTTAAATGGGGTTTTGCGTTTTTTCTGTTTTGTTACTGTGGTTTCTCGATCTACTGCACTGGGTTACGACTTATTGTCTTTTTTACCAATGTGAACTACCAAGTTCGAATTTTTAAAGTATTTTATACTGTTCTGTGCTTGTGGGTACATGGATCTTGGTGGGTAATTTCTTTGGTGCTTGATTAGTAGAAAACATTGCTGGTAATTAGGGAGCTTGCTAAGTTATCTGATTTTCATGAGTTTTCTGTGAGCTTTGTAGCATATCGTGCAATGTTGATCGTATTTTTGTGATTCTGTTTGGATTTTTAGTGTTGATTTTGGTTTGGGACTTCTGTTGACTATTTGTTGAAATTGGCTTCTTCTTTAATGCGGGGGTTATATGTTTTTGGACTTCTTTGATTTTTAGTAATCATGGTGTTACTAAATTGGTTAGGTAACTGCTGAAGTTATTGAAGATTACCGTTTAATTGAGGAGTTG</gDNA_template>
            <first_frame> I  N  I  S  F  S  L  W  Y  R  S  F  F  *  V  K  L  H  F  Q  Q  K  F  K  M  G  F  I  I  S  S  S  Y  S  H  I  F  *  D  F  L  F  L  I  S  E  L  M  N  T  I  F  A  *  L  H  E  A  P  K  Q  E  N  T  N  P  E  V  F  R  R  F  I  M  S  Y  T  S  Y  H  A  V  L  L  N  G  V  L  R  F  F  C  F  V  T  V  V  S  R  S  T  A  L  G  Y  D  L  L  S  F  L  P  M  *  T  T  K  F  E  F  L  K  Y  F  I  L  F  C  A  C  G  Y  M  D  L  G  G  *  F  L  W  C  L  I  S  R  K  H  C  W  *  L  G  S  L  L  S  Y  L  I  F  M  S  F  L  *  A  L  *  H  I  V  Q  C  *  S  Y  F  C  D  S  V  W  I  F  S  V  D  F  G  L  G  L  L  L  T  I  C  *  N  W  L  L  L  *  C  G  G  Y  M  F  L  D  F  F  D  F  *  *  S  W  C  Y  *  I  G  *  V  T  A  E  V  I  E  D  Y  R  L  I  E  E  L </first_frame>
            <second_frame>  L  T  S  L  S  L  S  G  T  D  L  S  S  K  *  S  S  I  F  S  R  N  S  K  W  V  S  S  Y  P  L  R  I  L  I  Y  S  E  I  S  Y  F  *  F  L  S  L  *  T  P  F  L  L  S  Y  T  K  P  Q  N  K  R  T  Q  T  Q  R  F  L  G  V  L  L  *  V  T  P  H  T  M  L  F  C  *  M  G  F  C  V  F  S  V  L  L  L  W  F  L  D  L  L  H  W  V  T  T  Y  C  L  F  Y  Q  C  E  L  P  S  S  N  F  *  S  I  L  Y  C  S  V  L  V  G  T  W  I  L  V  G  N  F  F  G  A  *  L  V  E  N  I  A  G  N  *  G  A  C  *  V  I  *  F  S  *  V  F  C  E  L  C  S  I  S  C  N  V  D  R  I  F  V  I  L  F  G  F  L  V  L  I  L  V  W  D  F  C  *  L  F  V  E  I  G  F  F  F  N  A  G  V  I  C  F  W  T  S  L  I  F  S  N  H  G  V  T  K  L  V  R  *  L  L  K  L  L  K  I  T  V  *  L  R  S   </second_frame>
            <third_frame>   *  H  L  F  L  S  L  V  P  I  F  L  L  S  K  A  P  F  S  A  E  I  Q  N  G  F  H  H  I  L  F  V  F  S  Y  I  L  R  F  P  I  S  N  F  *  A  Y  E  H  H  F  C  L  A  T  R  S  P  K  T  R  E  H  K  P  R  G  F  *  A  F  Y  Y  E  L  H  L  I  P  C  C  F  V  K  W  G  F  A  F  F  L  F  C  Y  C  G  F  S  I  Y  C  T  G  L  R  L  I  V  F  F  T  N  V  N  Y  Q  V  R  I  F  K  V  F  Y  T  V  L  C  L  W  V  H  G  S  W  W  V  I  S  L  V  L  D  *  *  K  T  L  L  V  I  R  E  L  A  K  L  S  D  F  H  E  F  S  V  S  F  V  A  Y  R  A  M  L  I  V  F  L  *  F  C  L  D  F  *  C  *  F  W  F  G  T  S  V  D  Y  L  L  K  L  A  S  S  L  M  R  G  L  Y  V  F  G  L  L  *  F  L  V  I  M  V  L  L  N  W  L  G  N  C  *  S  Y  *  R  L  P  F  N  *  G  V  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0020J02.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="88638" stop="88862"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>222</number_coding_nucleotides>
                  <number_encoded_amino_acids>74</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AFYYELHLIPCCFVKWGFAFFLFCYCGFSIYCTGLRLIVFFTNVNYQVRIFKVFYTVLCLWVHGSWWVISLVLD*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="+" PGL_start="95057" PGL_stop="98049"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="95057" e_stop="95067"/>
            <exon e_start="95366" e_stop="95492"/>
            <exon e_start="95587" e_stop="95789"/>
            <exon e_start="95884" e_stop="96066"/>
            <exon e_start="96451" e_stop="96546"/>
            <exon e_start="96696" e_stop="96893"/>
            <exon e_start="97180" e_stop="97451"/>
            <exon e_start="97599" e_stop="98049"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.966" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.931" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.938" acc_prob="0.808" e_score="1.000"/>
          <exon-intron don_prob="0.642" acc_prob="0.879" e_score="0.989"/>
          <exon-intron don_prob="0.994" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.972" acc_prob="0.999" e_score="0.990"/>
          <exon-intron don_prob="0.999" acc_prob="0.984" e_score="0.993"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="95057" e_stop="95067" e_length="11"/>
          </exon>
          <intron i_serial="1" don_prob="0.966" acc_prob="0.996">
            <gDNA_intron_boundary i_start="95068" i_stop="95365" i_length="298"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="95366" e_stop="95492" e_length="127"/>
          </exon>
          <intron i_serial="2" don_prob="0.931" acc_prob="0.990">
            <gDNA_intron_boundary i_start="95493" i_stop="95586" i_length="94"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="95587" e_stop="95789" e_length="203"/>
          </exon>
          <intron i_serial="3" don_prob="0.938" acc_prob="0.808">
            <gDNA_intron_boundary i_start="95790" i_stop="95883" i_length="94"/>
          </intron>
          <exon e_serial="4" e_score="0.989">
            <gDNA_exon_boundary e_start="95884" e_stop="96066" e_length="183"/>
          </exon>
          <intron i_serial="4" don_prob="0.642" acc_prob="0.879">
            <gDNA_intron_boundary i_start="96067" i_stop="96450" i_length="384"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="96451" e_stop="96546" e_length="96"/>
          </exon>
          <intron i_serial="5" don_prob="0.994" acc_prob="0.991">
            <gDNA_intron_boundary i_start="96547" i_stop="96695" i_length="149"/>
          </intron>
          <exon e_serial="6" e_score="0.990">
            <gDNA_exon_boundary e_start="96696" e_stop="96893" e_length="198"/>
          </exon>
          <intron i_serial="6" don_prob="0.972" acc_prob="0.999">
            <gDNA_intron_boundary i_start="96894" i_stop="97179" i_length="286"/>
          </intron>
          <exon e_serial="7" e_score="0.993">
            <gDNA_exon_boundary e_start="97180" e_stop="97451" e_length="272"/>
          </exon>
          <intron i_serial="7" don_prob="0.999" acc_prob="0.984">
            <gDNA_intron_boundary i_start="97452" i_stop="97598" i_length="147"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="97599" e_stop="98049" e_length="451"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95057" stop="95067"/>
              <exon start="95366" stop="95492"/>
              <exon start="95587" stop="95789"/>
              <exon start="95884" stop="96066"/>
              <exon start="96451" stop="96546"/>
              <exon start="96696" stop="96893"/>
              <exon start="97180" stop="97291"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U567056" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="96859" stop="96893"/>
              <exon start="97180" stop="97451"/>
              <exon start="97599" stop="98049"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U567055" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAATGAAAGAG : GATATTGATCGAAAAAATGCACAAACTGCTGCCATCTTGAAAATGCAAGGGGCTCAATTGGCAGAAATGGAAGCACTTTACCGGGAAGAACAAGTTCTAAGGAAAAAGTATTTCAACATAATAGAAG : ATATGAAAGGCAAGATCAGAGTCTACTGTAGATTAAGACCACTTTGTGAAAAGGAAATTATAGCAAAGGAAAGAAATGCCATCAGAAGTGTTGATGAGTTTACTGTTGAACATTTATGGAAAGATGATAAAGCAAAACAGCACATGTATGATCGTGTCTTTGATGGAAATGCCACCCAAGATGATGTGTTCGAAGATACTAAG : TACTTGGTTCAATCAGCTGTTGATGGATATAATGTTTGCATATTTGCATATGGACAGACTGGATCTGGCAAGACATTCACAATCTATGGAGCTGATAGTAATCCAGGACTGACACCAAGAGCTATGTCCGAACTCTTTCGAATTATGAAAAAAGACAGTAATAAGTTCTCTTTCTCTTTAAAG : GCGTACATGGTAGAGTTGTATCAGGATACGTTGGTGGATCTTTTATTGCCAAAGCAAGCAAAGCGCTTGAAATTGGATATAAAAAAGGACGCAAAG : GGCATGGTTTCTGTGGAGAATGTGACAGTGGTGTCTATTTCAACGTACGAGGAGCTTAAGACAATAATCCAAAGAGGATCTGAACAGCGTCATACGACTGGAACCTTGATGAATGAGCAGAGTTCAAGATCTCATCTTATTGTTTCAGTTATTATCGAGAGTACCAATCTTCAAACTCAGGCGATTGCCAGAGGGAAG : CTGAGTTTTGTGGATCTTGCTGGCTCAGAAAGAGTTAAAAAGTCTGGCTCAGCTGGCAATCAATTAAAAGAAGCTCAAAGCATTAACAAGTCCCTGTCAGCACTTGGTGATGTTATAAGTGCATTATCTTCAGGAAATCAACACATTCCTTATCGAAATCACAAGCTAACCATGTTGATGAGCGACTCGTTAGGTGGAAATGCTAAAACCCTGATGTTTGTAAACATCTCTCCAGCAGAATCAAACTTGGATGAGACTCACAATTCCTTGAC : GTATGCATCAAGAGTTCGTTCTATTGTAAATGATCCCAGCAAAAATGTTTCCTCTAAGGAAGTCGCTCGTTTAAAGAAGCTGGTCTCATATTGGAAGGAACAAGCTGGTAGAAAAGGAGATGATGAGGAATTGGAGGAAATCCAAGACGAACGACCATCTAAAGACAAGAATGATGGTCGTTATTCCATGTAAAACCTCTCGAATTGAACACGCGGAACGAAAATCAAGTTATCTTGTTTAGCTGCCTCAAAAGTGATGAGGAAAATAGTGAACAATTGAACAGCTTGTTCAAGCTGTGTTACTAAGTGGTTTGAGATTTTCCTTCCCAGAATTTTGTTGTCTGATTGGGTGGCTTAAAGAAGTTAGTTTAGGGAGTCCTCAATCCTCATGTTGTATAGAGTTATATGTGTATATTATATCAATCAATGGTTAACTACATTCTTTCTCCCC</gDNA_template>
            <first_frame> K  *  K  R :   I  L  I  E  K  M  H  K  L  L  P  S  *  K  C  K  G  L  N  W  Q  K  W  K  H  F  T  G  K  N  K  F  *  G  K  S  I  S  T  *  *  K  :  I  *  K  A  R  S  E  S  T  V  D  *  D  H  F  V  K  R  K  L  *  Q  R  K  E  M  P  S  E  V  L  M  S  L  L  L  N  I  Y  G  K  M  I  K  Q  N  S  T  C  M  I  V  S  L  M  E  M  P  P  K  M  M  C  S  K  I  L  S :   T  W  F  N  Q  L  L  M  D  I  M  F  A  Y  L  H  M  D  R  L  D  L  A  R  H  S  Q  S  M  E  L  I  V  I  Q  D  *  H  Q  E  L  C  P  N  S  F  E  L  *  K  K  T  V  I  S  S  L  S  L  *  R :   R  T  W  *  S  C  I  R  I  R  W  W  I  F  Y  C  Q  S  K  Q  S  A  *  N  W  I  *  K  R  T  Q  R :   A  W  F  L  W  R  M  *  Q  W  C  L  F  Q  R  T  R  S  L  R  Q  *  S  K  E  D  L  N  S  V  I  R  L  E  P  *  *  M  S  R  V  Q  D  L  I  L  L  F  Q  L  L  S  R  V  P  I  F  K  L  R  R  L  P  E  G  S :   *  V  L  W  I  L  L  A  Q  K  E  L  K  S  L  A  Q  L  A  I  N  *  K  K  L  K  A  L  T  S  P  C  Q  H  L  V  M  L  *  V  H  Y  L  Q  E  I  N  T  F  L  I  E  I  T  S  *  P  C  *  *  A  T  R  *  V  E  M  L  K  P  *  C  L  *  T  S  L  Q  Q  N  Q  T  W  M  R  L  T  I  P  *   : R  M  H  Q  E  F  V  L  L  *  M  I  P  A  K  M  F  P  L  R  K  S  L  V  *  R  S  W  S  H  I  G  R  N  K  L  V  E  K  E  M  M  R  N  W  R  K  S  K  T  N  D  H  L  K  T  R  M  M  V  V  I  P  C  K  T  S  R  I  E  H  A  E  R  K  S  S  Y  L  V  *  L  P  Q  K  *  *  G  K  *  *  T  I  E  Q  L  V  Q  A  V  L  L  S  G  L  R  F  S  F  P  E  F  C  C  L  I  G  W  L  K  E  V  S  L  G  S  P  Q  S  S  C  C  I  E  L  Y  V  Y  I  I  S  I  N  G  *  L  H  S  F  S   </first_frame>
            <second_frame>  N  E  R   : G  Y  *  S  K  K  C  T  N  C  C  H  L  E  N  A  R  G  S  I  G  R  N  G  S  T  L  P  G  R  T  S  S  K  E  K  V  F  Q  H  N  R  R :   Y  E  R  Q  D  Q  S  L  L  *  I  K  T  T  L  *  K  G  N  Y  S  K  G  K  K  C  H  Q  K  C  *  *  V  Y  C  *  T  F  M  E  R  *  *  S  K  T  A  H  V  *  S  C  L  *  W  K  C  H  P  R  *  C  V  R  R  Y  *   : V  L  G  S  I  S  C  *  W  I  *  C  L  H  I  C  I  W  T  D  W  I  W  Q  D  I  H  N  L  W  S  *  *  *  S  R  T  D  T  K  S  Y  V  R  T  L  S  N  Y  E  K  R  Q  *  *  V  L  F  L  F  K   : G  V  H  G  R  V  V  S  G  Y  V  G  G  S  F  I  A  K  A  S  K  A  L  E  I  G  Y  K  K  G  R  K   : G  H  G  F  C  G  E  C  D  S  G  V  Y  F  N  V  R  G  A  *  D  N  N  P  K  R  I  *  T  A  S  Y  D  W  N  L  D  E  *  A  E  F  K  I  S  S  Y  C  F  S  Y  Y  R  E  Y  Q  S  S  N  S  G  D  C  Q  R  E   : A  E  F  C  G  S  C  W  L  R  K  S  *  K  V  W  L  S  W  Q  S  I  K  R  S  S  K  H  *  Q  V  P  V  S  T  W  *  C  Y  K  C  I  I  F  R  K  S  T  H  S  L  S  K  S  Q  A  N  H  V  D  E  R  L  V  R  W  K  C  *  N  P  D  V  C  K  H  L  S  S  R  I  K  L  G  *  D  S  Q  F  L  D  :  V  C  I  K  S  S  F  Y  C  K  *  S  Q  Q  K  C  F  L  *  G  S  R  S  F  K  E  A  G  L  I  L  E  G  T  S  W  *  K  R  R  *  *  G  I  G  G  N  P  R  R  T  T  I  *  R  Q  E  *  W  S  L  F  H  V  K  P  L  E  L  N  T  R  N  E  N  Q  V  I  L  F  S  C  L  K  S  D  E  E  N  S  E  Q  L  N  S  L  F  K  L  C  Y  *  V  V  *  D  F  P  S  Q  N  F  V  V  *  L  G  G  L  K  K  L  V  *  G  V  L  N  P  H  V  V  *  S  Y  M  C  I  L  Y  Q  S  M  V  N  Y  I  L  S  P  </second_frame>
            <third_frame>   M  K  E  :  D  I  D  R  K  N  A  Q  T  A  A  I  L  K  M  Q  G  A  Q  L  A  E  M  E  A  L  Y  R  E  E  Q  V  L  R  K  K  Y  F  N  I  I  E   : D  M  K  G  K  I  R  V  Y  C  R  L  R  P  L  C  E  K  E  I  I  A  K  E  R  N  A  I  R  S  V  D  E  F  T  V  E  H  L  W  K  D  D  K  A  K  Q  H  M  Y  D  R  V  F  D  G  N  A  T  Q  D  D  V  F  E  D  T  K  :  Y  L  V  Q  S  A  V  D  G  Y  N  V  C  I  F  A  Y  G  Q  T  G  S  G  K  T  F  T  I  Y  G  A  D  S  N  P  G  L  T  P  R  A  M  S  E  L  F  R  I  M  K  K  D  S  N  K  F  S  F  S  L  K  :  A  Y  M  V  E  L  Y  Q  D  T  L  V  D  L  L  L  P  K  Q  A  K  R  L  K  L  D  I  K  K  D  A  K  :  G  M  V  S  V  E  N  V  T  V  V  S  I  S  T  Y  E  E  L  K  T  I  I  Q  R  G  S  E  Q  R  H  T  T  G  T  L  M  N  E  Q  S  S  R  S  H  L  I  V  S  V  I  I  E  S  T  N  L  Q  T  Q  A  I  A  R  G  K  :  L  S  F  V  D  L  A  G  S  E  R  V  K  K  S  G  S  A  G  N  Q  L  K  E  A  Q  S  I  N  K  S  L  S  A  L  G  D  V  I  S  A  L  S  S  G  N  Q  H  I  P  Y  R  N  H  K  L  T  M  L  M  S  D  S  L  G  G  N  A  K  T  L  M  F  V  N  I  S  P  A  E  S  N  L  D  E  T  H  N  S  L  T :   Y  A  S  R  V  R  S  I  V  N  D  P  S  K  N  V  S  S  K  E  V  A  R  L  K  K  L  V  S  Y  W  K  E  Q  A  G  R  K  G  D  D  E  E  L  E  E  I  Q  D  E  R  P  S  K  D  K  N  D  G  R  Y  S  M  *  N  L  S  N  *  T  R  G  T  K  I  K  L  S  C  L  A  A  S  K  V  M  R  K  I  V  N  N  *  T  A  C  S  S  C  V  T  K  W  F  E  I  F  L  P  R  I  L  L  S  D  W  V  A  *  R  S  *  F  R  E  S  S  I  L  M  L  Y  R  V  I  C  V  Y  Y  I  N  Q  W  L  T  T  F  F  L  P </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0020J02.1" strand="+"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="95059" stop="95067"/>
                    <exon start="95366" stop="95492"/>
                    <exon start="95587" stop="95789"/>
                    <exon start="95884" stop="96066"/>
                    <exon start="96451" stop="96546"/>
                    <exon start="96696" stop="96893"/>
                    <exon start="97180" stop="97451"/>
                    <exon start="97599" stop="97791"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1278</number_coding_nucleotides>
                  <number_encoded_amino_acids>426</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MKEDIDRKNAQTAAILKMQGAQLAEMEALYREEQVLRKKYFNIIEDMKGKIRVYCRLRPLCEKEIIAKERNAIRSVDEFTVEHLWKDDKAKQHMYDRVFDGNATQDDVFEDTKYLVQSAVDGYNVCIFAYGQTGSGKTFTIYGADSNPGLTPRAMSELFRIMKKDSNKFSFSLKAYMVELYQDTLVDLLLPKQAKRLKLDIKKDAKGMVSVENVTVVSISTYEELKTIIQRGSEQRHTTGTLMNEQSSRSHLIVSVIIESTNLQTQAIARGKLSFVDLAGSERVKKSGSAGNQLKEAQSINKSLSALGDVISALSSGNQHIPYRNHKLTMLMSDSLGGNAKTLMFVNISPAESNLDETHNSLTYASRVRSIVNDPSKNVSSKEVARLKKLVSYWKEQAGRKGDDEELEEIQDERPSKDKNDGRYSM*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="98120" PGL_stop="97690"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="98120" e_stop="97690"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.914"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.914">
            <gDNA_exon_boundary e_start="98120" e_stop="97690" e_length="431"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98120" stop="97690"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U595368" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGCCTAATTATGTATTATAATTATCAACAATAATTAGGATTTCCAAATCCAAAACAAAGCACAAAAAATTTGGGGAGAAAGAATGTAGTTAACCATTGATTGATATAATATACACATATAACTCTATACAACATGAGGATTGAGGACTCCCTAAACTAACTTCTTTAAGCCACCCAATCAGACAACAAAATTCTGGGAAGGAAAATCTCAAACCACTTAGTAACACAGCTTGAACAAGCTGTTCAATTGTTCACTATTTTCCTCATCACTTTTGAGGCAGCTAAACAAGATAACTTGATTTTCGTTCCGCGTGTTCAATTCGAGAGGTTTTACATGGAATAACGACCATCATTCTTGTCTTTAGATGGTCGTTCGTCTTGGATTTCCTCCAATTCCTCATCATCTCCTTTTCTACCAGCTTGTTCCTTCCA</gDNA_template>
            <first_frame> S  L  I  M  Y  Y  N  Y  Q  Q  *  L  G  F  P  N  P  K  Q  S  T  K  N  L  G  R  K  N  V  V  N  H  *  L  I  *  Y  T  H  I  T  L  Y  N  M  R  I  E  D  S  L  N  *  L  L  *  A  T  Q  S  D  N  K  I  L  G  R  K  I  S  N  H  L  V  T  Q  L  E  Q  A  V  Q  L  F  T  I  F  L  I  T  F  E  A  A  K  Q  D  N  L  I  F  V  P  R  V  Q  F  E  R  F  Y  M  E  *  R  P  S  F  L  S  L  D  G  R  S  S  W  I  S  S  N  S  S  S  S  P  F  L  P  A  C  S  F   </first_frame>
            <second_frame>  A  *  L  C  I  I  I  I  N  N  N  *  D  F  Q  I  Q  N  K  A  Q  K  I  W  G  E  R  M  *  L  T  I  D  *  Y  N  I  H  I  *  L  Y  T  T  *  G  L  R  T  P  *  T  N  F  F  K  P  P  N  Q  T  T  K  F  W  E  G  K  S  Q  T  T  *  *  H  S  L  N  K  L  F  N  C  S  L  F  S  S  S  L  L  R  Q  L  N  K  I  T  *  F  S  F  R  V  F  N  S  R  G  F  T  W  N  N  D  H  H  S  C  L  *  M  V  V  R  L  G  F  P  P  I  P  H  H  L  L  F  Y  Q  L  V  P  S  </second_frame>
            <third_frame>   P  N  Y  V  L  *  L  S  T  I  I  R  I  S  K  S  K  T  K  H  K  K  F  G  E  K  E  C  S  *  P  L  I  D  I  I  Y  T  Y  N  S  I  Q  H  E  D  *  G  L  P  K  L  T  S  L  S  H  P  I  R  Q  Q  N  S  G  K  E  N  L  K  P  L  S  N  T  A  *  T  S  C  S  I  V  H  Y  F  P  H  H  F  *  G  S  *  T  R  *  L  D  F  R  S  A  C  S  I  R  E  V  L  H  G  I  T  T  I  I  L  V  F  R  W  S  F  V  L  D  F  L  Q  F  L  I  I  S  F  S  T  S  L  F  L  P </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLm0020J02.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="+" PGL_start="102260" PGL_stop="110729"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="102260" e_stop="102421"/>
            <exon e_start="108515" e_stop="108757"/>
            <exon e_start="109840" e_stop="110155"/>
            <exon e_start="110333" e_stop="110729"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.765" e_score="0.975"/>
          <exon-intron don_prob="0.983" acc_prob="0.394" e_score="0.996"/>
          <exon-intron don_prob="0.971" acc_prob="0.933" e_score="1.000"/>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.975">
            <gDNA_exon_boundary e_start="102260" e_stop="102421" e_length="162"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.765">
            <gDNA_intron_boundary i_start="102422" i_stop="108514" i_length="6093"/>
          </intron>
          <exon e_serial="2" e_score="0.996">
            <gDNA_exon_boundary e_start="108515" e_stop="108757" e_length="243"/>
          </exon>
          <intron i_serial="2" don_prob="0.983" acc_prob="0.394">
            <gDNA_intron_boundary i_start="108758" i_stop="109839" i_length="1082"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="109840" e_stop="110155" e_length="316"/>
          </exon>
          <intron i_serial="3" don_prob="0.971" acc_prob="0.933">
            <gDNA_intron_boundary i_start="110156" i_stop="110332" i_length="177"/>
          </intron>
          <exon e_serial="4" e_score="0.995">
            <gDNA_exon_boundary e_start="110333" e_stop="110729" e_length="397"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102260" stop="102421"/>
              <exon start="108515" stop="108757"/>
              <exon start="109840" stop="110155"/>
              <exon start="110333" stop="110729"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U564520" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAACAAATAAACTCCAAGTTCCAAAAAAAAAAATCTAAGGTAAGAGCAAGAGCAAAAACACAAAATGGAGAGTGAAAATTCAGTGCCAGTAATTGATTTAGAGGATTTTCCAAGGCAATTATCTAAGTTAATTTGGGCATGTGAAGAATGGGGTTGTTTCAG : AATTTTGAACCATGATAAAATCCTTCCAGTTTCACTCATGGCAGAGATGAAGGAAGTGGTGAGGGCATTGTTTTATCTTCCAACTGAAATCAAGAAACGCAACAAAGATGTACTTGTAGGATCTGGGTACATGGCTCCTAGTGAAAAAAACCCTCTTTATGAAGCTTTTGGTCTCTATAATATGTCTTGTCATGAAGATTTAGATGAGTTTTGTACTCAGTTGGATGCATCTCCACACCAAAG : AGAGACAATTAAGAAGTATGCTGCAGCAATTAATGGACTAATGATGGACATTCTGCGAAAGATGAGTGAAGGGTTGGGACTGCCAAATGTTTCTTTTGAGGATTGGCCTTGTCAGTTTAGGATTAACAAGTACAACTTCACGCCAGAAGTTGTAGGTTCCTCTGGGGTTCAGATACACACAGACTTGGCATTCCTTACTATTCTACAGGATGATGAAAGCGTTGGTGGTCTTGAGGTAATGAAGAAGTCTGGTGAATTTGTAGCAGTTGATCGTTGGCCAAACACCCTCCTTGTGAATCTTGGAGACATAGGCACG : GTATGGAGCAATGGAAGATTACACTCTGTCAAGCATAGAGTGATATGCAAGGAAGCAAAACTACGGGTATCTATTGCTTCATTCATCTTGGGACCAAGGGACACAGCAGTGGAACCACCATCTGAGCTGGTAGATGCTGAACACCCCCGTATGTATGTTCCTTTCACTTTCACTGATTATAGAAAGCTCCGTTACTCAACAAAGTTGCAGGCAGGGGAAACTCTTGAACTTATGCGTACTAACTTGTAAAACTTTGGCAAGCATCTAAGATCCTCCGTTATATTGATTTACAGAAATGATCTTGAAAGTAAGAAAGACAATATATCTTAGTGGGATTTCATCATCTATATATCGTCAATGATCTAAGCTACAATAGCCTATAAAATGGCAGAGCATT</gDNA_template>
            <first_frame> Q  Q  I  N  S  K  F  Q  K  K  K  S  K  V  R  A  R  A  K  T  Q  N  G  E  *  K  F  S  A  S  N  *  F  R  G  F  S  K  A  I  I  *  V  N  L  G  M  *  R  M  G  L  F  Q  :  N  F  E  P  *  *  N  P  S  S  F  T  H  G  R  D  E  G  S  G  E  G  I  V  L  S  S  N  *  N  Q  E  T  Q  Q  R  C  T  C  R  I  W  V  H  G  S  *  *  K  K  P  S  L  *  S  F  W  S  L  *  Y  V  L  S  *  R  F  R  *  V  L  Y  S  V  G  C  I  S  T  P  K  :  R  D  N  *  E  V  C  C  S  N  *  W  T  N  D  G  H  S  A  K  D  E  *  R  V  G  T  A  K  C  F  F  *  G  L  A  L  S  V  *  D  *  Q  V  Q  L  H  A  R  S  C  R  F  L  W  G  S  D  T  H  R  L  G  I  P  Y  Y  S  T  G  *  *  K  R  W  W  S  *  G  N  E  E  V  W  *  I  C  S  S  *  S  L  A  K  H  P  P  C  E  S  W  R  H  R  H   : G  M  E  Q  W  K  I  T  L  C  Q  A  *  S  D  M  Q  G  S  K  T  T  G  I  Y  C  F  I  H  L  G  T  K  G  H  S  S  G  T  T  I  *  A  G  R  C  *  T  P  P  Y  V  C  S  F  H  F  H  *  L  *  K  A  P  L  L  N  K  V  A  G  R  G  N  S  *  T  Y  A  Y  *  L  V  K  L  W  Q  A  S  K  I  L  R  Y  I  D  L  Q  K  *  S  *  K  *  E  R  Q  Y  I  L  V  G  F  H  H  L  Y  I  V  N  D  L  S  Y  N  S  L  *  N  G  R  A   </first_frame>
            <second_frame>  N  K  *  T  P  S  S  K  K  K  N  L  R  *  E  Q  E  Q  K  H  K  M  E  S  E  N  S  V  P  V  I  D  L  E  D  F  P  R  Q  L  S  K  L  I  W  A  C  E  E  W  G  C  F  R :   I  L  N  H  D  K  I  L  P  V  S  L  M  A  E  M  K  E  V  V  R  A  L  F  Y  L  P  T  E  I  K  K  R  N  K  D  V  L  V  G  S  G  Y  M  A  P  S  E  K  N  P  L  Y  E  A  F  G  L  Y  N  M  S  C  H  E  D  L  D  E  F  C  T  Q  L  D  A  S  P  H  Q  R :   E  T  I  K  K  Y  A  A  A  I  N  G  L  M  M  D  I  L  R  K  M  S  E  G  L  G  L  P  N  V  S  F  E  D  W  P  C  Q  F  R  I  N  K  Y  N  F  T  P  E  V  V  G  S  S  G  V  Q  I  H  T  D  L  A  F  L  T  I  L  Q  D  D  E  S  V  G  G  L  E  V  M  K  K  S  G  E  F  V  A  V  D  R  W  P  N  T  L  L  V  N  L  G  D  I  G  T  :  V  W  S  N  G  R  L  H  S  V  K  H  R  V  I  C  K  E  A  K  L  R  V  S  I  A  S  F  I  L  G  P  R  D  T  A  V  E  P  P  S  E  L  V  D  A  E  H  P  R  M  Y  V  P  F  T  F  T  D  Y  R  K  L  R  Y  S  T  K  L  Q  A  G  E  T  L  E  L  M  R  T  N  L  *  N  F  G  K  H  L  R  S  S  V  I  L  I  Y  R  N  D  L  E  S  K  K  D  N  I  S  *  W  D  F  I  I  Y  I  S  S  M  I  *  A  T  I  A  Y  K  M  A  E  H  </second_frame>
            <third_frame>   T  N  K  L  Q  V  P  K  K  K  I  *  G  K  S  K  S  K  N  T  K  W  R  V  K  I  Q  C  Q  *  L  I  *  R  I  F  Q  G  N  Y  L  S  *  F  G  H  V  K  N  G  V  V  S   : E  F  *  T  M  I  K  S  F  Q  F  H  S  W  Q  R  *  R  K  W  *  G  H  C  F  I  F  Q  L  K  S  R  N  A  T  K  M  Y  L  *  D  L  G  T  W  L  L  V  K  K  T  L  F  M  K  L  L  V  S  I  I  C  L  V  M  K  I  *  M  S  F  V  L  S  W  M  H  L  H  T  K   : E  R  Q  L  R  S  M  L  Q  Q  L  M  D  *  *  W  T  F  C  E  R  *  V  K  G  W  D  C  Q  M  F  L  L  R  I  G  L  V  S  L  G  L  T  S  T  T  S  R  Q  K  L  *  V  P  L  G  F  R  Y  T  Q  T  W  H  S  L  L  F  Y  R  M  M  K  A  L  V  V  L  R  *  *  R  S  L  V  N  L  *  Q  L  I  V  G  Q  T  P  S  L  *  I  L  E  T  *  A  R :   Y  G  A  M  E  D  Y  T  L  S  S  I  E  *  Y  A  R  K  Q  N  Y  G  Y  L  L  L  H  S  S  W  D  Q  G  T  Q  Q  W  N  H  H  L  S  W  *  M  L  N  T  P  V  C  M  F  L  S  L  S  L  I  I  E  S  S  V  T  Q  Q  S  C  R  Q  G  K  L  L  N  L  C  V  L  T  C  K  T  L  A  S  I  *  D  P  P  L  Y  *  F  T  E  M  I  L  K  V  R  K  T  I  Y  L  S  G  I  S  S  S  I  Y  R  Q  *  S  K  L  Q  *  P  I  K  W  Q  S  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0020J02.1" strand="+"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="102303" stop="102421"/>
                    <exon start="108515" stop="108757"/>
                    <exon start="109840" stop="110155"/>
                    <exon start="110333" stop="110581"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>924</number_coding_nucleotides>
                  <number_encoded_amino_acids>308</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EQEQKHKMESENSVPVIDLEDFPRQLSKLIWACEEWGCFRILNHDKILPVSLMAEMKEVVRALFYLPTEIKKRNKDVLVGSGYMAPSEKNPLYEAFGLYNMSCHEDLDEFCTQLDASPHQRETIKKYAAAINGLMMDILRKMSEGLGLPNVSFEDWPCQFRINKYNFTPEVVGSSGVQIHTDLAFLTILQDDESVGGLEVMKKSGEFVAVDRWPNTLLVNLGDIGTVWSNGRLHSVKHRVICKEAKLRVSIASFILGPRDTAVEPPSELVDAEHPRMYVPFTFTDYRKLRYSTKLQAGETLELMRTNL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="103644" e_stop="103896"/>
            <exon e_start="104074" e_stop="104626"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.975" e_score="0.968"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.968">
            <gDNA_exon_boundary e_start="103644" e_stop="103896" e_length="253"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.975">
            <gDNA_intron_boundary i_start="103897" i_stop="104073" i_length="177"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="104074" e_stop="104626" e_length="553"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103644" stop="103896"/>
              <exon start="104074" stop="104626"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U564521" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAGTGAAGGATTGGGACTGCGAAATGTTTCGTTTGAGGATTGGCCTTGTCAGTTTAGGATTAACAAGTACCACTTCACCCCAGAAGCTGTAGGTTCCTATGGGGTTCAGATACACACAGACTCAGGATTCCTTACTATTCTACAGGATGATGAATGCGTTGGTGGTCTCGAGGTCATGAAGAAGTCTGGTGAATTTGTAGCAGTTGATCCTTGGCCAAACACCCTCCTTGTGAATCTTGGAGACATAGGCACG : GTATGGAGCAATGGAAGACTATACTCCGCCAAGCATAGAGTGATATGCAAGGAAGCAAAACTACGAGTGTCTATTGCTTCATTCCTCTTGGGACCAAGGGACACGGCAGTGGAACCACCACCTGAGCTGGTAAATGCTGAACACCCCCGTATCTATGTTCCTTTCACTTTCAATGATTATAGGAAGCTCCGTTTATCGACAAAGTTGCAGGCAGGGGAAGCTCTTGATCTTATGCGAACTAACCTGTAAAACTTTGGAAAGCATCTCAGGTCCTCCGTTATATTGATTTACAGAAATGATCTTGAAAGTAAGAAAGATAATATATCTTAGTGGGATTTCATCATCTATATATCGTCATATGTGTGGTGGAGCAATAAAATCATATGTGCACACATCGAATTTTTAGATGGAAATTATTTGGTTCTTGATCCCGAACCAATTGTGATAGGAGAACCTTGTTGGCTTGATGCATACATGTTAAATAAACTCATCTGATACCAAATTTTATTTGAGAGATTCGTTCTCATAATCAATGGTCTAGCTATTATTGGAG</gDNA_template>
            <first_frame> E  *  R  I  G  T  A  K  C  F  V  *  G  L  A  L  S  V  *  D  *  Q  V  P  L  H  P  R  S  C  R  F  L  W  G  S  D  T  H  R  L  R  I  P  Y  Y  S  T  G  *  *  M  R  W  W  S  R  G  H  E  E  V  W  *  I  C  S  S  *  S  L  A  K  H  P  P  C  E  S  W  R  H  R  H   : G  M  E  Q  W  K  T  I  L  R  Q  A  *  S  D  M  Q  G  S  K  T  T  S  V  Y  C  F  I  P  L  G  T  K  G  H  G  S  G  T  T  T  *  A  G  K  C  *  T  P  P  Y  L  C  S  F  H  F  Q  *  L  *  E  A  P  F  I  D  K  V  A  G  R  G  S  S  *  S  Y  A  N  *  P  V  K  L  W  K  A  S  Q  V  L  R  Y  I  D  L  Q  K  *  S  *  K  *  E  R  *  Y  I  L  V  G  F  H  H  L  Y  I  V  I  C  V  V  E  Q  *  N  H  M  C  T  H  R  I  F  R  W  K  L  F  G  S  *  S  R  T  N  C  D  R  R  T  L  L  A  *  C  I  H  V  K  *  T  H  L  I  P  N  F  I  *  E  I  R  S  H  N  Q  W  S  S  Y  Y  W   </first_frame>
            <second_frame>  S  E  G  L  G  L  R  N  V  S  F  E  D  W  P  C  Q  F  R  I  N  K  Y  H  F  T  P  E  A  V  G  S  Y  G  V  Q  I  H  T  D  S  G  F  L  T  I  L  Q  D  D  E  C  V  G  G  L  E  V  M  K  K  S  G  E  F  V  A  V  D  P  W  P  N  T  L  L  V  N  L  G  D  I  G  T  :  V  W  S  N  G  R  L  Y  S  A  K  H  R  V  I  C  K  E  A  K  L  R  V  S  I  A  S  F  L  L  G  P  R  D  T  A  V  E  P  P  P  E  L  V  N  A  E  H  P  R  I  Y  V  P  F  T  F  N  D  Y  R  K  L  R  L  S  T  K  L  Q  A  G  E  A  L  D  L  M  R  T  N  L  *  N  F  G  K  H  L  R  S  S  V  I  L  I  Y  R  N  D  L  E  S  K  K  D  N  I  S  *  W  D  F  I  I  Y  I  S  S  Y  V  W  W  S  N  K  I  I  C  A  H  I  E  F  L  D  G  N  Y  L  V  L  D  P  E  P  I  V  I  G  E  P  C  W  L  D  A  Y  M  L  N  K  L  I  *  Y  Q  I  L  F  E  R  F  V  L  I  I  N  G  L  A  I  I  G  </second_frame>
            <third_frame>   V  K  D  W  D  C  E  M  F  R  L  R  I  G  L  V  S  L  G  L  T  S  T  T  S  P  Q  K  L  *  V  P  M  G  F  R  Y  T  Q  T  Q  D  S  L  L  F  Y  R  M  M  N  A  L  V  V  S  R  S  *  R  S  L  V  N  L  *  Q  L  I  L  G  Q  T  P  S  L  *  I  L  E  T  *  A  R :   Y  G  A  M  E  D  Y  T  P  P  S  I  E  *  Y  A  R  K  Q  N  Y  E  C  L  L  L  H  S  S  W  D  Q  G  T  R  Q  W  N  H  H  L  S  W  *  M  L  N  T  P  V  S  M  F  L  S  L  S  M  I  I  G  S  S  V  Y  R  Q  S  C  R  Q  G  K  L  L  I  L  C  E  L  T  C  K  T  L  E  S  I  S  G  P  P  L  Y  *  F  T  E  M  I  L  K  V  R  K  I  I  Y  L  S  G  I  S  S  S  I  Y  R  H  M  C  G  G  A  I  K  S  Y  V  H  T  S  N  F  *  M  E  I  I  W  F  L  I  P  N  Q  L  *  *  E  N  L  V  G  L  M  H  T  C  *  I  N  S  S  D  T  K  F  Y  L  R  D  S  F  S  *  S  M  V  *  L  L  L  E </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0020J02.1" strand="+"/>
                <serials PGL_serial="14" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="103645" stop="103896"/>
                    <exon start="104074" stop="104322"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>498</number_coding_nucleotides>
                  <number_encoded_amino_acids>166</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SEGLGLRNVSFEDWPCQFRINKYHFTPEAVGSYGVQIHTDSGFLTILQDDECVGGLEVMKKSGEFVAVDPWPNTLLVNLGDIGTVWSNGRLYSAKHRVICKEAKLRVSIASFLLGPRDTAVEPPPELVNAEHPRIYVPFTFNDYRKLRLSTKLQAGEALDLMRTNL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="-" PGL_start="111818" PGL_stop="110995"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="111818" e_stop="110995"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.990"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.990">
            <gDNA_exon_boundary e_start="111818" e_stop="110995" e_length="824"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111818" stop="110995"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U570570" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCGACCTGAAGGCGAGTAACATCATGCTTGACTCAAAGTTCAATGCGCGCCTTGGGGACTTTGGCCTTGCGCGAGCACTTGACAACGAAAGGACCTCGTATGCTGAGGCAGAAGGAGTGCTTGGTACAATGGGATACATTGCACCAGAGTGTTTCCACACAGGGAAAGCCACACAGCAATCTGATGTGTACGCGTTTGGGGCAGTGTTATTGGAAGTTGTATGTGGCCAGAGACCTGGAACCAAGATTAATGGCTTTCAATTCTTTGTTGATTGGGTTTGGTACTTGCACCGCGATGGCCGTATCTTGGAAGCTGTTGATCCAAGGCTTGGAGATGACTATGTTGCTGATGAAGCAAAGAAACTTTTACTACTTGGTTTGGCTTGTGCACATCCTATAGCTACTGACAGGCCTAAAACACAGGCAATAGTTCAGATTATATCAGGGTCAGCACCAGCACCAGAAGTTCCACCATTCAAGCCAGCATTTGTGTGGCCATCAATGGTGCCAATTGACATAGACTCAAGTGTTATGGACACAACATCCATTACTACTTCTCACTTCAATTCAGGATGGAGTCTAGACTATCAAAGCAGGGAGACCCCAACATATGCAGATCACTCTTTGGTGTAGTTACTTGATGGTAAACAACTATTACCAAAAGGAAAATTGATTTTTTTGGCCTTCAATTTTTTAAAAATATTTCCTGTAATTATGTTTTCCTGGGAGGAGGTTAAAAATTTCCTTCAGTTTTTCACTTTTTGTTTGATGTTATTTTTCTTCTTTTCAATTTGTTAATGGAGCATGATGAAAAGATCAGGCAGC</gDNA_template>
            <first_frame> A  T  *  R  R  V  T  S  C  L  T  Q  S  S  M  R  A  L  G  T  L  A  L  R  E  H  L  T  T  K  G  P  R  M  L  R  Q  K  E  C  L  V  Q  W  D  T  L  H  Q  S  V  S  T  Q  G  K  P  H  S  N  L  M  C  T  R  L  G  Q  C  Y  W  K  L  Y  V  A  R  D  L  E  P  R  L  M  A  F  N  S  L  L  I  G  F  G  T  C  T  A  M  A  V  S  W  K  L  L  I  Q  G  L  E  M  T  M  L  L  M  K  Q  R  N  F  Y  Y  L  V  W  L  V  H  I  L  *  L  L  T  G  L  K  H  R  Q  *  F  R  L  Y  Q  G  Q  H  Q  H  Q  K  F  H  H  S  S  Q  H  L  C  G  H  Q  W  C  Q  L  T  *  T  Q  V  L  W  T  Q  H  P  L  L  L  L  T  S  I  Q  D  G  V  *  T  I  K  A  G  R  P  Q  H  M  Q  I  T  L  W  C  S  Y  L  M  V  N  N  Y  Y  Q  K  E  N  *  F  F  W  P  S  I  F  *  K  Y  F  L  *  L  C  F  P  G  R  R  L  K  I  S  F  S  F  S  L  F  V  *  C  Y  F  S  S  F  Q  F  V  N  G  A  *  *  K  D  Q  A   </first_frame>
            <second_frame>  R  P  E  G  E  *  H  H  A  *  L  K  V  Q  C  A  P  W  G  L  W  P  C  A  S  T  *  Q  R  K  D  L  V  C  *  G  R  R  S  A  W  Y  N  G  I  H  C  T  R  V  F  P  H  R  E  S  H  T  A  I  *  C  V  R  V  W  G  S  V  I  G  S  C  M  W  P  E  T  W  N  Q  D  *  W  L  S  I  L  C  *  L  G  L  V  L  A  P  R  W  P  Y  L  G  S  C  *  S  K  A  W  R  *  L  C  C  *  *  S  K  E  T  F  T  T  W  F  G  L  C  T  S  Y  S  Y  *  Q  A  *  N  T  G  N  S  S  D  Y  I  R  V  S  T  S  T  R  S  S  T  I  Q  A  S  I  C  V  A  I  N  G  A  N  *  H  R  L  K  C  Y  G  H  N  I  H  Y  Y  F  S  L  Q  F  R  M  E  S  R  L  S  K  Q  G  D  P  N  I  C  R  S  L  F  G  V  V  T  *  W  *  T  T  I  T  K  R  K  I  D  F  F  G  L  Q  F  F  K  N  I  S  C  N  Y  V  F  L  G  G  G  *  K  F  P  S  V  F  H  F  L  F  D  V  I  F  L  L  F  N  L  L  M  E  H  D  E  K  I  R  Q  </second_frame>
            <third_frame>   D  L  K  A  S  N  I  M  L  D  S  K  F  N  A  R  L  G  D  F  G  L  A  R  A  L  D  N  E  R  T  S  Y  A  E  A  E  G  V  L  G  T  M  G  Y  I  A  P  E  C  F  H  T  G  K  A  T  Q  Q  S  D  V  Y  A  F  G  A  V  L  L  E  V  V  C  G  Q  R  P  G  T  K  I  N  G  F  Q  F  F  V  D  W  V  W  Y  L  H  R  D  G  R  I  L  E  A  V  D  P  R  L  G  D  D  Y  V  A  D  E  A  K  K  L  L  L  L  G  L  A  C  A  H  P  I  A  T  D  R  P  K  T  Q  A  I  V  Q  I  I  S  G  S  A  P  A  P  E  V  P  P  F  K  P  A  F  V  W  P  S  M  V  P  I  D  I  D  S  S  V  M  D  T  T  S  I  T  T  S  H  F  N  S  G  W  S  L  D  Y  Q  S  R  E  T  P  T  Y  A  D  H  S  L  V  *  L  L  D  G  K  Q  L  L  P  K  G  K  L  I  F  L  A  F  N  F  L  K  I  F  P  V  I  M  F  S  W  E  E  V  K  N  F  L  Q  F  F  T  F  C  L  M  L  F  F  F  F  S  I  C  *  W  S  M  M  K  R  S  G  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0020J02.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="111816" stop="111187"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>627</number_coding_nucleotides>
                  <number_encoded_amino_acids>209</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DLKASNIMLDSKFNARLGDFGLARALDNERTSYAEAEGVLGTMGYIAPECFHTGKATQQSDVYAFGAVLLEVVCGQRPGTKINGFQFFVDWVWYLHRDGRILEAVDPRLGDDYVADEAKKLLLLGLACAHPIATDRPKTQAIVQIISGSAPAPEVPPFKPAFVWPSMVPIDIDSSVMDTTSITTSHFNSGWSLDYQSRETPTYADHSLV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="-" PGL_start="114626" PGL_stop="111848"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="114626" e_stop="113955"/>
            <exon e_start="112007" e_stop="111848"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.989" acc_prob="0.917" e_score="0.996"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="114626" e_stop="113955" e_length="672"/>
          </exon>
          <intron i_serial="1" don_prob="0.989" acc_prob="0.917">
            <gDNA_intron_boundary i_start="113954" i_stop="112008" i_length="1947"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="112007" e_stop="111848" e_length="160"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="114626" stop="113955"/>
              <exon start="112007" stop="111848"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U565077" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="114495" stop="114304"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U596257" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CCCATGGTATAGAACTTGCTCCTATTGGTGCAAGATTCTATAATGTTTGGGTACAGTATGATGGAATCAAGAAAGTTCTTGATGTTTATATTGTTGAACAAGCACTGAAAAATGGGTCTACCCCACCTATACCAAAAACCCCCATTTTAACATATGATCTTGATTTGAAAGAACATGTAAATCAAGAATCATATTTTGGGTTTTCTGCATCAACTGGGACTAACTACCAACTCAACTGCGTATTGAGATGGAACTTAACAGTTGAGTATTTCCCTGAAAAGAAAAATCCTTGGTTGAAGATTGTTTTAGGTGTTGGGATTCCTGTAGTGTCTCTTTTGATTCTTGGCGCGGCGTGTTTAGGGTATTGTTATCATAAGAAAAGGATTGATAGGTCACAGTCTAACATATTGGGTGCACTCAAGAGTTTGCCTGGAACTCCACAAGAGTTTCAGTTCAAGGCTTTGAAGAAAGCTACAAACAATTTTGATGAAAAGAATAAGCTTGGGCAAGGAGGATATGGAGTTGTTTACAGAGGATTTTTAGCTGGTGAGGAGAACAAAGATATTGCTGTCAAATGGTTTTCTAGGGAAAGCATCAAAGGGCAAGATGATTTCTTGGCTGAGCTTACTATTATCAATCGTCTTCGACATAAACATCTTGTCAAATTGCTTG : GATGGTGTCACAAGAATGGAAAGCTACTGCTTGTATATGAATACATGCCTAATGGCAGTCTAGATATGCACCTCTTTGCGGGCCCAGATAAAGAGCCGCTGAGCTGGCACGTCCGCTACAAGATTGTGCAAGGTGTGGCCTCAGCATTACATTATCTGCA</gDNA_template>
            <first_frame> P  M  V  *  N  L  L  L  L  V  Q  D  S  I  M  F  G  Y  S  M  M  E  S  R  K  F  L  M  F  I  L  L  N  K  H  *  K  M  G  L  P  H  L  Y  Q  K  P  P  F  *  H  M  I  L  I  *  K  N  M  *  I  K  N  H  I  L  G  F  L  H  Q  L  G  L  T  T  N  S  T  A  Y  *  D  G  T  *  Q  L  S  I  S  L  K  R  K  I  L  G  *  R  L  F  *  V  L  G  F  L  *  C  L  F  *  F  L  A  R  R  V  *  G  I  V  I  I  R  K  G  L  I  G  H  S  L  T  Y  W  V  H  S  R  V  C  L  E  L  H  K  S  F  S  S  R  L  *  R  K  L  Q  T  I  L  M  K  R  I  S  L  G  K  E  D  M  E  L  F  T  E  D  F  *  L  V  R  R  T  K  I  L  L  S  N  G  F  L  G  K  A  S  K  G  K  M  I  S  W  L  S  L  L  L  S  I  V  F  D  I  N  I  L  S  N  C  L  :  D  G  V  T  R  M  E  S  Y  C  L  Y  M  N  T  C  L  M  A  V  *  I  C  T  S  L  R  A  Q  I  K  S  R  *  A  G  T  S  A  T  R  L  C  K  V  W  P  Q  H  Y  I  I  C  </first_frame>
            <second_frame>  P  W  Y  R  T  C  S  Y  W  C  K  I  L  *  C  L  G  T  V  *  W  N  Q  E  S  S  *  C  L  Y  C  *  T  S  T  E  K  W  V  Y  P  T  Y  T  K  N  P  H  F  N  I  *  S  *  F  E  R  T  C  K  S  R  I  I  F  W  V  F  C  I  N  W  D  *  L  P  T  Q  L  R  I  E  M  E  L  N  S  *  V  F  P  *  K  E  K  S  L  V  E  D  C  F  R  C  W  D  S  C  S  V  S  F  D  S  W  R  G  V  F  R  V  L  L  S  *  E  K  D  *  *  V  T  V  *  H  I  G  C  T  Q  E  F  A  W  N  S  T  R  V  S  V  Q  G  F  E  E  S  Y  K  Q  F  *  *  K  E  *  A  W  A  R  R  I  W  S  C  L  Q  R  I  F  S  W  *  G  E  Q  R  Y  C  C  Q  M  V  F  *  G  K  H  Q  R  A  R  *  F  L  G  *  A  Y  Y  Y  Q  S  S  S  T  *  T  S  C  Q  I  A  W :   M  V  S  Q  E  W  K  A  T  A  C  I  *  I  H  A  *  W  Q  S  R  Y  A  P  L  C  G  P  R  *  R  A  A  E  L  A  R  P  L  Q  D  C  A  R  C  G  L  S  I  T  L  S  A </second_frame>
            <third_frame>   H  G  I  E  L  A  P  I  G  A  R  F  Y  N  V  W  V  Q  Y  D  G  I  K  K  V  L  D  V  Y  I  V  E  Q  A  L  K  N  G  S  T  P  P  I  P  K  T  P  I  L  T  Y  D  L  D  L  K  E  H  V  N  Q  E  S  Y  F  G  F  S  A  S  T  G  T  N  Y  Q  L  N  C  V  L  R  W  N  L  T  V  E  Y  F  P  E  K  K  N  P  W  L  K  I  V  L  G  V  G  I  P  V  V  S  L  L  I  L  G  A  A  C  L  G  Y  C  Y  H  K  K  R  I  D  R  S  Q  S  N  I  L  G  A  L  K  S  L  P  G  T  P  Q  E  F  Q  F  K  A  L  K  K  A  T  N  N  F  D  E  K  N  K  L  G  Q  G  G  Y  G  V  V  Y  R  G  F  L  A  G  E  E  N  K  D  I  A  V  K  W  F  S  R  E  S  I  K  G  Q  D  D  F  L  A  E  L  T  I  I  N  R  L  R  H  K  H  L  V  K  L  L   : G  W  C  H  K  N  G  K  L  L  L  V  Y  E  Y  M  P  N  G  S  L  D  M  H  L  F  A  G  P  D  K  E  P  L  S  W  H  V  R  Y  K  I  V  Q  G  V  A  S  A  L  H  Y  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0020J02.1" strand="-"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="114624" stop="113955"/>
                    <exon start="112007" stop="111850"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>828</number_coding_nucleotides>
                  <number_encoded_amino_acids>276</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HGIELAPIGARFYNVWVQYDGIKKVLDVYIVEQALKNGSTPPIPKTPILTYDLDLKEHVNQESYFGFSASTGTNYQLNCVLRWNLTVEYFPEKKNPWLKIVLGVGIPVVSLLILGAACLGYCYHKKRIDRSQSNILGALKSLPGTPQEFQFKALKKATNNFDEKNKLGQGGYGVVYRGFLAGEENKDIAVKWFSRESIKGQDDFLAELTIINRLRHKHLVKLLGWCHKNGKLLLVYEYMPNGSLDMHLFAGPDKEPLSWHVRYKIVQGVASALHYL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="-" PGL_start="115454" PGL_stop="114644"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="115454" e_stop="114644"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="115454" e_stop="114644" e_length="811"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="115454" stop="114644"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U563791" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATGAAAGAGTGTGAGACTAAGCCAAAAACCTATTCAAACTTCTTTAACAAAAAATGTCTCTAATTATTTGAGTAGTATATCTCATTTTCTTCACTCATTGATCAATTATTTTATTTGTATCTACAAAAAAGCAAGAGAAACTCAACGTGCTTCAAAGTTTCTGCTCATTGATTTTTTCTTCTTCCCCTGTTTTCTTGTCCATCACCAAATCTACTTCCTCTGTAAGCCAAGAAGAAACTCACTGCTGATGAAAAATGGGGTTGTTAACACCAACAACACTCACCATTTTCATCATGCTCTTCTCTTTACTTCAACTCAAGCTTCAAGCTCAGAAAATGGAACATCTCAACTTAAAATATGCATCTTTTGATGAAACTTTCTTTGACATCTTTGAAGTTGAAAAGCCTGCAACAATTAGTAACGCTGCTCTTCAAGTAACCCCTGATTCTGCTTCTTCAGATTTCAATCGCTACAATAACTCAGGAAGAATCCTCTTTAAGCAACCATTTAAGCTCTGGGATGGTGATGTTTTCGACAATACAACAAGGGTTGCATCTTTCAACTCTTCTTTTCTTGTCAATATTTACAGACCAAATAATGAAACAGCTGCCGAAGGGTTAGCATTCTTGATTTCACCAGATTTGGAGAAGCCAGATAATAGCCAGGGCCAGTATTTAGGGTTAACAAATGGTTCTACAGATGGGATTTCTAGTAACAAAGTTGTTGCTGTTGAGCTTGATACTTCTAAACAAAGCTTTGACCCTGATGATAATCATATAGGTATTGATGTTCATAGTGTTAGATCTGTAAA</gDNA_template>
            <first_frame> M  K  E  C  E  T  K  P  K  T  Y  S  N  F  F  N  K  K  C  L  *  L  F  E  *  Y  I  S  F  S  S  L  I  D  Q  L  F  Y  L  Y  L  Q  K  S  K  R  N  S  T  C  F  K  V  S  A  H  *  F  F  L  L  P  L  F  S  C  P  S  P  N  L  L  P  L  *  A  K  K  K  L  T  A  D  E  K  W  G  C  *  H  Q  Q  H  S  P  F  S  S  C  S  S  L  Y  F  N  S  S  F  K  L  R  K  W  N  I  S  T  *  N  M  H  L  L  M  K  L  S  L  T  S  L  K  L  K  S  L  Q  Q  L  V  T  L  L  F  K  *  P  L  I  L  L  L  Q  I  S  I  A  T  I  T  Q  E  E  S  S  L  S  N  H  L  S  S  G  M  V  M  F  S  T  I  Q  Q  G  L  H  L  S  T  L  L  F  L  S  I  F  T  D  Q  I  M  K  Q  L  P  K  G  *  H  S  *  F  H  Q  I  W  R  S  Q  I  I  A  R  A  S  I  *  G  *  Q  M  V  L  Q  M  G  F  L  V  T  K  L  L  L  L  S  L  I  L  L  N  K  A  L  T  L  M  I  I  I  *  V  L  M  F  I  V  L  D  L  *  </first_frame>
            <second_frame>  *  K  S  V  R  L  S  Q  K  P  I  Q  T  S  L  T  K  N  V  S  N  Y  L  S  S  I  S  H  F  L  H  S  L  I  N  Y  F  I  C  I  Y  K  K  A  R  E  T  Q  R  A  S  K  F  L  L  I  D  F  F  F  F  P  C  F  L  V  H  H  Q  I  Y  F  L  C  K  P  R  R  N  S  L  L  M  K  N  G  V  V  N  T  N  N  T  H  H  F  H  H  A  L  L  F  T  S  T  Q  A  S  S  S  E  N  G  T  S  Q  L  K  I  C  I  F  *  *  N  F  L  *  H  L  *  S  *  K  A  C  N  N  *  *  R  C  S  S  S  N  P  *  F  C  F  F  R  F  Q  S  L  Q  *  L  R  K  N  P  L  *  A  T  I  *  A  L  G  W  *  C  F  R  Q  Y  N  K  G  C  I  F  Q  L  F  F  S  C  Q  Y  L  Q  T  K  *  *  N  S  C  R  R  V  S  I  L  D  F  T  R  F  G  E  A  R  *  *  P  G  P  V  F  R  V  N  K  W  F  Y  R  W  D  F  *  *  Q  S  C  C  C  *  A  *  Y  F  *  T  K  L  *  P  *  *  *  S  Y  R  Y  *  C  S  *  C  *  I  C  K </second_frame>
            <third_frame>   E  R  V  *  D  *  A  K  N  L  F  K  L  L  *  Q  K  M  S  L  I  I  *  V  V  Y  L  I  F  F  T  H  *  S  I  I  L  F  V  S  T  K  K  Q  E  K  L  N  V  L  Q  S  F  C  S  L  I  F  S  S  S  P  V  F  L  S  I  T  K  S  T  S  S  V  S  Q  E  E  T  H  C  *  *  K  M  G  L  L  T  P  T  T  L  T  I  F  I  M  L  F  S  L  L  Q  L  K  L  Q  A  Q  K  M  E  H  L  N  L  K  Y  A  S  F  D  E  T  F  F  D  I  F  E  V  E  K  P  A  T  I  S  N  A  A  L  Q  V  T  P  D  S  A  S  S  D  F  N  R  Y  N  N  S  G  R  I  L  F  K  Q  P  F  K  L  W  D  G  D  V  F  D  N  T  T  R  V  A  S  F  N  S  S  F  L  V  N  I  Y  R  P  N  N  E  T  A  A  E  G  L  A  F  L  I  S  P  D  L  E  K  P  D  N  S  Q  G  Q  Y  L  G  L  T  N  G  S  T  D  G  I  S  S  N  K  V  V  A  V  E  L  D  T  S  K  Q  S  F  D  P  D  D  N  H  I  G  I  D  V  H  S  V  R  S  V   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0020J02.1" strand="-"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="115203" stop="114646"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>558</number_coding_nucleotides>
                  <number_encoded_amino_acids>186</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KMGLLTPTTLTIFIMLFSLLQLKLQAQKMEHLNLKYASFDETFFDIFEVEKPATISNAALQVTPDSASSDFNRYNNSGRILFKQPFKLWDGDVFDNTTRVASFNSSFLVNIYRPNNETAAEGLAFLISPDLEKPDNSQGQYLGLTNGSTDGISSNKVVAVELDTSKQSFDPDDNHIGIDVHSVRSV</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="18" PGL_strand="+" PGL_start="127125" PGL_stop="130887"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="127125" e_stop="127301"/>
            <exon e_start="130297" e_stop="130887"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.981" acc_prob="0.988" e_score="1.000"/>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="127125" e_stop="127301" e_length="177"/>
          </exon>
          <intron i_serial="1" don_prob="0.981" acc_prob="0.988">
            <gDNA_intron_boundary i_start="127302" i_stop="130296" i_length="2995"/>
          </intron>
          <exon e_serial="2" e_score="0.993">
            <gDNA_exon_boundary e_start="130297" e_stop="130887" e_length="591"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="127125" stop="127301"/>
              <exon start="130297" stop="130887"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U584833" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACCGGATTAACCCTGGTGGTAGCTCGTCCAAAATCGGAATTTGGAGGACAGCAAAAAGCCCGTTCTTCTTTGCTGTAAAGCTCAGAGAAGTTGCCTCCGCCGATTTGCACAGAGAATTCAGCCGCCAAATTGACAGCCGTTCAATTTTGCCGGTAAATTTTGGGGCAAGAAAAGGAG : ATCAATTTTAGAGATATGCAAGACCAGAGAGGACTTGAGGAAGCTTCAGCTCCTAAAATGCGGAAAAAGAAAACATCACAACCGAAGGCTACAGTATTGCAAAAAGAAGGGAATAAGGCAAAAAGGATACAAGATGTGCATGCAATGCCAATTCAAAATGGGTTAAAACACACCAAGAGAGTCCCACCAAACGAAGTTTCCCCATTATTCCAATATGCTGAGAAATCAACACCTGAATTCTCGCCAGATACTTCCACTTCTGGAAAAGAATATCGGGCATTAAGGAGAAAGTATCTATTGCTGGAAGAAGAAAGTTTTGGTCTTAATAAAGAATTGAGAGAAACCGATGATGAGATCAAGGCCCTTGAAGACGAGAAGCTAACACTCCTTGATGATCTTGTTGTGTTAGAAGGCCTGGTTGATCCTTCAGATATTCAATCCCAAGGCCAGCGATTATGATGGTTTATTTATAATGTGTTTTTTCGGTAAACTGGGGATATATACAGAATTGTGTACAATAATCCAACTTCTGTTAGCATAAAGTTGAGATTGTAACGATGCATTATATAACATCGACTGATTGTTTATTGC</gDNA_template>
            <first_frame> T  G  L  T  L  V  V  A  R  P  K  S  E  F  G  G  Q  Q  K  A  R  S  S  L  L  *  S  S  E  K  L  P  P  P  I  C  T  E  N  S  A  A  K  L  T  A  V  Q  F  C  R  *  I  L  G  Q  E  K  E  :  I  N  F  R  D  M  Q  D  Q  R  G  L  E  E  A  S  A  P  K  M  R  K  K  K  T  S  Q  P  K  A  T  V  L  Q  K  E  G  N  K  A  K  R  I  Q  D  V  H  A  M  P  I  Q  N  G  L  K  H  T  K  R  V  P  P  N  E  V  S  P  L  F  Q  Y  A  E  K  S  T  P  E  F  S  P  D  T  S  T  S  G  K  E  Y  R  A  L  R  R  K  Y  L  L  L  E  E  E  S  F  G  L  N  K  E  L  R  E  T  D  D  E  I  K  A  L  E  D  E  K  L  T  L  L  D  D  L  V  V  L  E  G  L  V  D  P  S  D  I  Q  S  Q  G  Q  R  L  *  W  F  I  Y  N  V  F  F  R  *  T  G  D  I  Y  R  I  V  Y  N  N  P  T  S  V  S  I  K  L  R  L  *  R  C  I  I  *  H  R  L  I  V  Y  C </first_frame>
            <second_frame>  P  D  *  P  W  W  *  L  V  Q  N  R  N  L  E  D  S  K  K  P  V  L  L  C  C  K  A  Q  R  S  C  L  R  R  F  A  Q  R  I  Q  P  P  N  *  Q  P  F  N  F  A  G  K  F  W  G  K  K  R  R :   S  I  L  E  I  C  K  T  R  E  D  L  R  K  L  Q  L  L  K  C  G  K  R  K  H  H  N  R  R  L  Q  Y  C  K  K  K  G  I  R  Q  K  G  Y  K  M  C  M  Q  C  Q  F  K  M  G  *  N  T  P  R  E  S  H  Q  T  K  F  P  H  Y  S  N  M  L  R  N  Q  H  L  N  S  R  Q  I  L  P  L  L  E  K  N  I  G  H  *  G  E  S  I  Y  C  W  K  K  K  V  L  V  L  I  K  N  *  E  K  P  M  M  R  S  R  P  L  K  T  R  S  *  H  S  L  M  I  L  L  C  *  K  A  W  L  I  L  Q  I  F  N  P  K  A  S  D  Y  D  G  L  F  I  M  C  F  F  G  K  L  G  I  Y  T  E  L  C  T  I  I  Q  L  L  L  A  *  S  *  D  C  N  D  A  L  Y  N  I  D  *  L  F  I   </second_frame>
            <third_frame>   R  I  N  P  G  G  S  S  S  K  I  G  I  W  R  T  A  K  S  P  F  F  F  A  V  K  L  R  E  V  A  S  A  D  L  H  R  E  F  S  R  Q  I  D  S  R  S  I  L  P  V  N  F  G  A  R  K  G   : D  Q  F  *  R  Y  A  R  P  E  R  T  *  G  S  F  S  S  *  N  A  E  K  E  N  I  T  T  E  G  Y  S  I  A  K  R  R  E  *  G  K  K  D  T  R  C  A  C  N  A  N  S  K  W  V  K  T  H  Q  E  S  P  T  K  R  S  F  P  I  I  P  I  C  *  E  I  N  T  *  I  L  A  R  Y  F  H  F  W  K  R  I  S  G  I  K  E  K  V  S  I  A  G  R  R  K  F  W  S  *  *  R  I  E  R  N  R  *  *  D  Q  G  P  *  R  R  E  A  N  T  P  *  *  S  C  C  V  R  R  P  G  *  S  F  R  Y  S  I  P  R  P  A  I  M  M  V  Y  L  *  C  V  F  S  V  N  W  G  Y  I  Q  N  C  V  Q  *  S  N  F  C  *  H  K  V  E  I  V  T  M  H  Y  I  T  S  T  D  C  L  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0020J02.1" strand="+"/>
                <serials PGL_serial="18" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="127281" stop="127301"/>
                    <exon start="130297" stop="130755"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>477</number_coding_nucleotides>
                  <number_encoded_amino_acids>159</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ILGQEKEINFRDMQDQRGLEEASAPKMRKKKTSQPKATVLQKEGNKAKRIQDVHAMPIQNGLKHTKRVPPNEVSPLFQYAEKSTPEFSPDTSTSGKEYRALRRKYLLLEEESFGLNKELRETDDEIKALEDEKLTLLDDLVVLEGLVDPSDIQSQGQRL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="19" PGL_strand="-" PGL_start="135542" PGL_stop="131053"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="135542" e_stop="135150"/>
            <exon e_start="135059" e_stop="134962"/>
            <exon e_start="134865" e_stop="134768"/>
            <exon e_start="134676" e_stop="134518"/>
            <exon e_start="133960" e_stop="133849"/>
            <exon e_start="133763" e_stop="133628"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.267" acc_prob="0.994" e_score="0.977"/>
          <exon-intron don_prob="0.989" acc_prob="0.932" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.975" e_score="1.000"/>
          <exon-intron don_prob="0.980" acc_prob="0.850" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.986" e_score="0.991"/>
          <exon-only e_score="0.912"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.977">
            <gDNA_exon_boundary e_start="135542" e_stop="135150" e_length="393"/>
          </exon>
          <intron i_serial="1" don_prob="0.267" acc_prob="0.994">
            <gDNA_intron_boundary i_start="135149" i_stop="135060" i_length="90"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="135059" e_stop="134962" e_length="98"/>
          </exon>
          <intron i_serial="2" don_prob="0.989" acc_prob="0.932">
            <gDNA_intron_boundary i_start="134961" i_stop="134866" i_length="96"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="134865" e_stop="134768" e_length="98"/>
          </exon>
          <intron i_serial="3" don_prob="0.993" acc_prob="0.975">
            <gDNA_intron_boundary i_start="134767" i_stop="134677" i_length="91"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="134676" e_stop="134518" e_length="159"/>
          </exon>
          <intron i_serial="4" don_prob="0.980" acc_prob="0.850">
            <gDNA_intron_boundary i_start="134517" i_stop="133961" i_length="557"/>
          </intron>
          <exon e_serial="5" e_score="0.991">
            <gDNA_exon_boundary e_start="133960" e_stop="133849" e_length="112"/>
          </exon>
          <intron i_serial="5" don_prob="0.999" acc_prob="0.986">
            <gDNA_intron_boundary i_start="133848" i_stop="133764" i_length="85"/>
          </intron>
          <exon e_serial="6" e_score="0.912">
            <gDNA_exon_boundary e_start="133763" e_stop="133628" e_length="136"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="135542" stop="135150"/>
              <exon start="135059" stop="134962"/>
              <exon start="134865" stop="134768"/>
              <exon start="134676" stop="134518"/>
              <exon start="133960" stop="133849"/>
              <exon start="133763" stop="133628"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U566125" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCACGTTTCCATTTTCTTTTGTCTAAGCAATCGCGAAAAAAATTATTTAAGAGATCGAATATGATTATATGAAATATCTCTTAATTTTATCCGACGCAGTACGTTAATGGAAATATATTTTGTCTACTACTATTACACAGTATACCTGTGACTGAATAATCTCTTTCTCTTTCTCTCTCCCTCTCCTCTTTATTTTCAAATCATTCTCTCTCTCTGTGTGTCTTGTTCTGCTATAAAAAACCTCATCTTTTTTTTTTTCATCTTGTAGTTGATAATACATTCTTTTACTAGCCTTATACATCAAGATAGGAGATGGGTGTTTCAAAAAAGACTCTTTTTTTACTATTTGTTAGTGTTTTTCTTGGAGAAATTAGTCTCTGCTCTTCTACCAAG : TTATATGTGGTGTACATGGGAAGCAAAGATAGTGATGAGCATCAAGATGAGATTTTGAGGCAAAACCATCAAATGCTTACTGATATTCATGGAGGAAA : TGTTGAACAAGCCAAGAGTTCTCATGTATACAGTTATAGACATGGTTTTAAAGGCTTTGCAGCCAAGTTGACTGAGAAACAGGCTTCTGAAATATCTA : AAATGCCTGGTGTGGTATCTGTATTTCCAAATACTAAGAGAAACCTGCATACAACTCATTCATGGGATTTTATGGGGCTCAGTGAAGATGAAACAATGGAAATCCCAGGTTTTTCCACCAAGAACCAAGTTAATGTAATCATTGGTTTCATTGATACAG : GAATTTGGCCTGAGTCTCCAAGTTTTAGGGACACCCACATGCCTCCAGTGCCTGCTGGATGGAAAGGACAATGCCAATCAGGGGAAGCATTCAATGCCTCAATATGCAACAG : GAAAATAATTGGGGCAAGATATTATATGAGTGGCTATGCAGCTGAAGAAGATGAAAAGATCATGTTCAAGTCTGCCAGGGACAGTTCTGGTCATGGAAGTCATACAGCTTCAACTGCTGCTGGGCGTTATGTAGCT</gDNA_template>
            <first_frame> S  R  F  H  F  L  L  S  K  Q  S  R  K  K  L  F  K  R  S  N  M  I  I  *  N  I  S  *  F  Y  P  T  Q  Y  V  N  G  N  I  F  C  L  L  L  L  H  S  I  P  V  T  E  *  S  L  S  L  S  L  S  L  S  S  L  F  S  N  H  S  L  S  L  C  V  L  F  C  Y  K  K  P  H  L  F  F  F  H  L  V  V  D  N  T  F  F  Y  *  P  Y  T  S  R  *  E  M  G  V  S  K  K  T  L  F  L  L  F  V  S  V  F  L  G  E  I  S  L  C  S  S  T  K  :  L  Y  V  V  Y  M  G  S  K  D  S  D  E  H  Q  D  E  I  L  R  Q  N  H  Q  M  L  T  D  I  H  G  G  N :   V  E  Q  A  K  S  S  H  V  Y  S  Y  R  H  G  F  K  G  F  A  A  K  L  T  E  K  Q  A  S  E  I  S   : K  M  P  G  V  V  S  V  F  P  N  T  K  R  N  L  H  T  T  H  S  W  D  F  M  G  L  S  E  D  E  T  M  E  I  P  G  F  S  T  K  N  Q  V  N  V  I  I  G  F  I  D  T   : G  I  W  P  E  S  P  S  F  R  D  T  H  M  P  P  V  P  A  G  W  K  G  Q  C  Q  S  G  E  A  F  N  A  S  I  C  N  R :   K  I  I  G  A  R  Y  Y  M  S  G  Y  A  A  E  E  D  E  K  I  M  F  K  S  A  R  D  S  S  G  H  G  S  H  T  A  S  T  A  A  G  R  Y  V  A </first_frame>
            <second_frame>  H  V  S  I  F  F  C  L  S  N  R  E  K  N  Y  L  R  D  R  I  *  L  Y  E  I  S  L  N  F  I  R  R  S  T  L  M  E  I  Y  F  V  Y  Y  Y  Y  T  V  Y  L  *  L  N  N  L  F  L  F  L  S  P  S  P  L  Y  F  Q  I  I  L  S  L  C  V  S  C  S  A  I  K  N  L  I  F  F  F  F  I  L  *  L  I  I  H  S  F  T  S  L  I  H  Q  D  R  R  W  V  F  Q  K  R  L  F  F  Y  Y  L  L  V  F  F  L  E  K  L  V  S  A  L  L  P  S :   Y  M  W  C  T  W  E  A  K  I  V  M  S  I  K  M  R  F  *  G  K  T  I  K  C  L  L  I  F  M  E  E   : M  L  N  K  P  R  V  L  M  Y  T  V  I  D  M  V  L  K  A  L  Q  P  S  *  L  R  N  R  L  L  K  Y  L  :  K  C  L  V  W  Y  L  Y  F  Q  I  L  R  E  T  C  I  Q  L  I  H  G  I  L  W  G  S  V  K  M  K  Q  W  K  S  Q  V  F  P  P  R  T  K  L  M  *  S  L  V  S  L  I  Q  :  E  F  G  L  S  L  Q  V  L  G  T  P  T  C  L  Q  C  L  L  D  G  K  D  N  A  N  Q  G  K  H  S  M  P  Q  Y  A  T   : G  K  *  L  G  Q  D  I  I  *  V  A  M  Q  L  K  K  M  K  R  S  C  S  S  L  P  G  T  V  L  V  M  E  V  I  Q  L  Q  L  L  L  G  V  M  *   </second_frame>
            <third_frame>   T  F  P  F  S  F  V  *  A  I  A  K  K  I  I  *  E  I  E  Y  D  Y  M  K  Y  L  L  I  L  S  D  A  V  R  *  W  K  Y  I  L  S  T  T  I  T  Q  Y  T  C  D  *  I  I  S  F  S  F  S  L  P  L  L  F  I  F  K  S  F  S  L  S  V  C  L  V  L  L  *  K  T  S  S  F  F  F  S  S  C  S  *  *  Y  I  L  L  L  A  L  Y  I  K  I  G  D  G  C  F  K  K  D  S  F  F  T  I  C  *  C  F  S  W  R  N  *  S  L  L  F  Y  Q   : V  I  C  G  V  H  G  K  Q  R  *  *  *  A  S  R  *  D  F  E  A  K  P  S  N  A  Y  *  Y  S  W  R  K  :  C  *  T  S  Q  E  F  S  C  I  Q  L  *  T  W  F  *  R  L  C  S  Q  V  D  *  E  T  G  F  *  N  I  * :   N  A  W  C  G  I  C  I  S  K  Y  *  E  K  P  A  Y  N  S  F  M  G  F  Y  G  A  Q  *  R  *  N  N  G  N  P  R  F  F  H  Q  E  P  S  *  C  N  H  W  F  H  *  Y  R :   N  L  A  *  V  S  K  F  *  G  H  P  H  A  S  S  A  C  W  M  E  R  T  M  P  I  R  G  S  I  Q  C  L  N  M  Q  Q  :  E  N  N  W  G  K  I  L  Y  E  W  L  C  S  *  R  R  *  K  D  H  V  Q  V  C  Q  G  Q  F  W  S  W  K  S  Y  S  F  N  C  C  W  A  L  C  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0020J02.1" strand="-"/>
                <serials PGL_serial="19" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="135233" stop="135150"/>
                    <exon start="135059" stop="134962"/>
                    <exon start="134865" stop="134768"/>
                    <exon start="134676" stop="134518"/>
                    <exon start="133960" stop="133849"/>
                    <exon start="133763" stop="133628"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>687</number_coding_nucleotides>
                  <number_encoded_amino_acids>229</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EMGVSKKTLFLLFVSVFLGEISLCSSTKLYVVYMGSKDSDEHQDEILRQNHQMLTDIHGGNVEQAKSSHVYSYRHGFKGFAAKLTEKQASEISKMPGVVSVFPNTKRNLHTTHSWDFMGLSEDETMEIPGFSTKNQVNVIIGFIDTGIWPESPSFRDTHMPPVPAGWKGQCQSGEAFNASICNRKIIGARYYMSGYAAEEDEKIMFKSARDSSGHGSHTASTAAGRYVA</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="133962" e_stop="133849"/>
            <exon e_start="133763" e_stop="133241"/>
            <exon e_start="133160" e_stop="133054"/>
            <exon e_start="132971" e_stop="132526"/>
            <exon e_start="132277" e_stop="132091"/>
            <exon e_start="131881" e_stop="131053"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.986" e_score="0.991"/>
          <exon-intron don_prob="0.904" acc_prob="0.766" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.953" e_score="1.000"/>
          <exon-only e_score="0.990"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.991">
            <gDNA_exon_boundary e_start="133962" e_stop="133849" e_length="114"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.986">
            <gDNA_intron_boundary i_start="133848" i_stop="133764" i_length="85"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="133763" e_stop="133241" e_length="523"/>
          </exon>
          <intron i_serial="2" don_prob="0.904" acc_prob="0.766">
            <gDNA_intron_boundary i_start="133240" i_stop="133161" i_length="80"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="133160" e_stop="133054" e_length="107"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.000">
            <gDNA_intron_boundary i_start="133053" i_stop="132972" i_length="82"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="132971" e_stop="132526" e_length="446"/>
          </exon>
          <intron i_serial="4" don_prob="0.991" acc_prob="0.990">
            <gDNA_intron_boundary i_start="132525" i_stop="132278" i_length="248"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="132277" e_stop="132091" e_length="187"/>
          </exon>
          <intron i_serial="5" don_prob="0.999" acc_prob="0.953">
            <gDNA_intron_boundary i_start="132090" i_stop="131882" i_length="209"/>
          </intron>
          <exon e_serial="6" e_score="0.990">
            <gDNA_exon_boundary e_start="131881" e_stop="131053" e_length="829"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="133962" stop="133849"/>
              <exon start="133763" stop="133241"/>
              <exon start="133160" stop="133054"/>
              <exon start="132971" stop="132526"/>
              <exon start="132277" stop="132091"/>
              <exon start="131881" stop="131053"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U566126" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGGAATTTGGCCTGAGTCTCCAAGTTTTAGGGACACCCACATGCCTCCAGTGCCTGCTGGATGGAAAGGACAATGCCAATCAGGGGAAGCATTCAATGCCTCAATATGCAACAG : GAAAATAATTGGGGCAAGATATTATATGAGTGGCTATGCAGCTGAAGAAGATGAAAAGATCATGTTCAAGTCTGCCAGGGACAGTTCTGGTCATGGAAGTCATACAGCTTCAACTGCTGCTGGGCGTTATGTAGCTGATATGAATTACAAAGGTTTGGCATCTGGAGGAGCCAGAGGTGGTGCCCCAATGGCCAGGATAGCAGTGTACAAAACCTGCTGGAGTTCTGGTTGCTATGATGTTGATTTGTTGGCTGCATTTGATGATGCAATTAGAGATGGGGTTCATGTCATTTCTATATCTTTGGGCCCAGATGCTCCCCAAGGAGATTATTTTAGTGATGCAATTTCTGTGGGGTCATTTCATGCTGTTAGCCGTGGGATACTTGTAGTGGCCTCCGTTGGAAATGAAGGAACCTCTGGTTCAGCCACAAATTTAGCTCCTTGGATGATCACAGTTGCAGCCAGTTCAACCGATAGAGATTTTACATCTGATGTTTTACTAGGAAATAGAGTTCAACTCACG : GGTGAAAGTCTTAGCTTATCTCAAATGCATACATCTGCAAAAATCATACCTGCTTCTGAAGCTTATGCTGGATACTTCACTCCTTATCAATCCAGGTGAAGCAGAAG : TTATTGCTTAGATAGTTCTTTGAATAGAACTAAGGCCAAAGGGAAGGTTCTTGTGTGTCGACATGCTGGAAGCTCAAGTGAGTCAAAGCTGGAGAAAAGCAATATAGTTAAACAAGCTGGTGGAGTTGGGATGATCCTTATTGATGAAGCAGACAAGGGTGTGGCTATTCCCTTCTCCATTCCAGCAGCAACTGTTGGGCAAAAGATTGGAAAAAAGATCCTAGCTTACATTAATAATACACGGTTCACTTCTTTGTTAGTGGCTGTTGATATTTGTTTTTATTGTTCTTTGATGTTGTTAGCAATCATCTCATCTCTTTTATATTTACAGCCTCCCTACTGCAAGAATTCTCTCTGCTAAAACTGTTTTGGGAGCTCAACCTGCTCCTCGAGTAACAGCATTTTCTTCAAGAGGTCCTAATTCTCTAACACCAGAAATTTTGAAG : CCTGATATTACTGCTCCCGGTTTAAATATCCTGGCAGCATGGTCCCCAGCAATGTCTAGGTTGAAGTTCAACATACTCTCTGGAACCTCCATGGCTTGCCCTCACATATCAGGAGTTGTTGCCTTGTTAAAAGCCGTGCATCCATCATGGTCTCCCTCTGCAATCAAATCAGCCATCATGACAACAG : CCAAACTATCAGATATGCATCACAAACCCATAATAGTAGATCCTGAAGGGAAGAAGGCTAATCCATTTGATTTTGGTTCTGGATTTGTTAACCCCACGAAAGTCCTCAATCCTGGTCTGATATATGATGCACAACCAGAAGATTACAGAGCATTTCTTTGTTCAATTGGTTATGACGAGAAATCTCTGCATCTAATTACAAGGGACAACAGAACGTGTGATCAAACCTTTGCATCGCCAAATGAACTAAATTATCCCTCCATCACAGTACCAAACCTCAGAAACAATTACTCAGTATCTCGAACTGTCACAAATGTGGGAAAGTCAAGGAGTACTTACAAGGCAGTTATATTTGCACCAAAGGGTATCAATGTTACTGTGGTGCCGCGAAGATTAGCCTTCACTAGATATTACCAGAAGATGAATTTCACAGTGACTTTCAAAGTGGCTGCACCTACACAGGGATATGTCTTTGGGTCCTTGTCATGGAGGAACAAAAGAACATGGGTAACATCTCCACTTGTTGTCAGAGTGGCACATTCCAATATGGGTACTGTGGTATAGTTCAGCTGCAGTGCTATTTATTTGTGTTATATAAGGTAAGTAACAAGATATTGCAACCAGTAGCTGCTGAAAATGGTTGCATGAAGAAGCCAACACAAAATTCTTAGAAGAATACATGTAATTAGTAGCAGAATACAAATAATTAGTAATTCTTTATTCTATTTGTCCTTTAGTTTTGAGTTTTGGTTCTTGCTACCTAGTCAGGTTTTACTAATAGGGATACTGCAAATTCTTTTACTTGTCTAGTAATTGCATTATGTATTGGC</gDNA_template>
            <first_frame> R  N  L  A  *  V  S  K  F  *  G  H  P  H  A  S  S  A  C  W  M  E  R  T  M  P  I  R  G  S  I  Q  C  L  N  M  Q  Q  :  E  N  N  W  G  K  I  L  Y  E  W  L  C  S  *  R  R  *  K  D  H  V  Q  V  C  Q  G  Q  F  W  S  W  K  S  Y  S  F  N  C  C  W  A  L  C  S  *  Y  E  L  Q  R  F  G  I  W  R  S  Q  R  W  C  P  N  G  Q  D  S  S  V  Q  N  L  L  E  F  W  L  L  *  C  *  F  V  G  C  I  *  *  C  N  *  R  W  G  S  C  H  F  Y  I  F  G  P  R  C  S  P  R  R  L  F  *  *  C  N  F  C  G  V  I  S  C  C  *  P  W  D  T  C  S  G  L  R  W  K  *  R  N  L  W  F  S  H  K  F  S  S  L  D  D  H  S  C  S  Q  F  N  R  *  R  F  Y  I  *  C  F  T  R  K  *  S  S  T  H   : G  *  K  S  *  L  I  S  N  A  Y  I  C  K  N  H  T  C  F  *  S  L  C  W  I  L  H  S  L  S  I  Q  V  K  Q  K  :  L  L  L  R  *  F  F  E  *  N  *  G  Q  R  E  G  S  C  V  S  T  C  W  K  L  K  *  V  K  A  G  E  K  Q  Y  S  *  T  S  W  W  S  W  D  D  P  Y  *  *  S  R  Q  G  C  G  Y  S  L  L  H  S  S  S  N  C  W  A  K  D  W  K  K  D  P  S  L  H  *  *  Y  T  V  H  F  F  V  S  G  C  *  Y  L  F  L  L  F  F  D  V  V  S  N  H  L  I  S  F  I  F  T  A  S  L  L  Q  E  F  S  L  L  K  L  F  W  E  L  N  L  L  L  E  *  Q  H  F  L  Q  E  V  L  I  L  *  H  Q  K  F  *  S :   L  I  L  L  L  P  V  *  I  S  W  Q  H  G  P  Q  Q  C  L  G  *  S  S  T  Y  S  L  E  P  P  W  L  A  L  T  Y  Q  E  L  L  P  C  *  K  P  C  I  H  H  G  L  P  L  Q  S  N  Q  P  S  *  Q  Q  :  P  N  Y  Q  I  C  I  T  N  P  *  *  *  I  L  K  G  R  R  L  I  H  L  I  L  V  L  D  L  L  T  P  R  K  S  S  I  L  V  *  Y  M  M  H  N  Q  K  I  T  E  H  F  F  V  Q  L  V  M  T  R  N  L  C  I  *  L  Q  G  T  T  E  R  V  I  K  P  L  H  R  Q  M  N  *  I  I  P  P  S  Q  Y  Q  T  S  E  T  I  T  Q  Y  L  E  L  S  Q  M  W  E  S  Q  G  V  L  T  R  Q  L  Y  L  H  Q  R  V  S  M  L  L  W  C  R  E  D  *  P  S  L  D  I  T  R  R  *  I  S  Q  *  L  S  K  W  L  H  L  H  R  D  M  S  L  G  P  C  H  G  G  T  K  E  H  G  *  H  L  H  L  L  S  E  W  H  I  P  I  W  V  L  W  Y  S  S  A  A  V  L  F  I  C  V  I  *  G  K  *  Q  D  I  A  T  S  S  C  *  K  W  L  H  E  E  A  N  T  K  F  L  E  E  Y  M  *  L  V  A  E  Y  K  *  L  V  I  L  Y  S  I  C  P  L  V  L  S  F  G  S  C  Y  L  V  R  F  Y  *  *  G  Y  C  K  F  F  Y  L  S  S  N  C  I  M  Y  W  </first_frame>
            <second_frame>  G  I  W  P  E  S  P  S  F  R  D  T  H  M  P  P  V  P  A  G  W  K  G  Q  C  Q  S  G  E  A  F  N  A  S  I  C  N  R :   K  I  I  G  A  R  Y  Y  M  S  G  Y  A  A  E  E  D  E  K  I  M  F  K  S  A  R  D  S  S  G  H  G  S  H  T  A  S  T  A  A  G  R  Y  V  A  D  M  N  Y  K  G  L  A  S  G  G  A  R  G  G  A  P  M  A  R  I  A  V  Y  K  T  C  W  S  S  G  C  Y  D  V  D  L  L  A  A  F  D  D  A  I  R  D  G  V  H  V  I  S  I  S  L  G  P  D  A  P  Q  G  D  Y  F  S  D  A  I  S  V  G  S  F  H  A  V  S  R  G  I  L  V  V  A  S  V  G  N  E  G  T  S  G  S  A  T  N  L  A  P  W  M  I  T  V  A  A  S  S  T  D  R  D  F  T  S  D  V  L  L  G  N  R  V  Q  L  T  :  G  E  S  L  S  L  S  Q  M  H  T  S  A  K  I  I  P  A  S  E  A  Y  A  G  Y  F  T  P  Y  Q  S  R  *  S  R  S :   Y  C  L  D  S  S  L  N  R  T  K  A  K  G  K  V  L  V  C  R  H  A  G  S  S  S  E  S  K  L  E  K  S  N  I  V  K  Q  A  G  G  V  G  M  I  L  I  D  E  A  D  K  G  V  A  I  P  F  S  I  P  A  A  T  V  G  Q  K  I  G  K  K  I  L  A  Y  I  N  N  T  R  F  T  S  L  L  V  A  V  D  I  C  F  Y  C  S  L  M  L  L  A  I  I  S  S  L  L  Y  L  Q  P  P  Y  C  K  N  S  L  C  *  N  C  F  G  S  S  T  C  S  S  S  N  S  I  F  F  K  R  S  *  F  S  N  T  R  N  F  E   : A  *  Y  Y  C  S  R  F  K  Y  P  G  S  M  V  P  S  N  V  *  V  E  V  Q  H  T  L  W  N  L  H  G  L  P  S  H  I  R  S  C  C  L  V  K  S  R  A  S  I  M  V  S  L  C  N  Q  I  S  H  H  D  N  S :   Q  T  I  R  Y  A  S  Q  T  H  N  S  R  S  *  R  E  E  G  *  S  I  *  F  W  F  W  I  C  *  P  H  E  S  P  Q  S  W  S  D  I  *  C  T  T  R  R  L  Q  S  I  S  L  F  N  W  L  *  R  E  I  S  A  S  N  Y  K  G  Q  Q  N  V  *  S  N  L  C  I  A  K  *  T  K  L  S  L  H  H  S  T  K  P  Q  K  Q  L  L  S  I  S  N  C  H  K  C  G  K  V  K  E  Y  L  Q  G  S  Y  I  C  T  K  G  Y  Q  C  Y  C  G  A  A  K  I  S  L  H  *  I  L  P  E  D  E  F  H  S  D  F  Q  S  G  C  T  Y  T  G  I  C  L  W  V  L  V  M  E  E  Q  K  N  M  G  N  I  S  T  C  C  Q  S  G  T  F  Q  Y  G  Y  C  G  I  V  Q  L  Q  C  Y  L  F  V  L  Y  K  V  S  N  K  I  L  Q  P  V  A  A  E  N  G  C  M  K  K  P  T  Q  N  S  *  K  N  T  C  N  *  *  Q  N  T  N  N  *  *  F  F  I  L  F  V  L  *  F  *  V  L  V  L  A  T  *  S  G  F  T  N  R  D  T  A  N  S  F  T  C  L  V  I  A  L  C  I  G </second_frame>
            <third_frame>   E  F  G  L  S  L  Q  V  L  G  T  P  T  C  L  Q  C  L  L  D  G  K  D  N  A  N  Q  G  K  H  S  M  P  Q  Y  A  T   : G  K  *  L  G  Q  D  I  I  *  V  A  M  Q  L  K  K  M  K  R  S  C  S  S  L  P  G  T  V  L  V  M  E  V  I  Q  L  Q  L  L  L  G  V  M  *  L  I  *  I  T  K  V  W  H  L  E  E  P  E  V  V  P  Q  W  P  G  *  Q  C  T  K  P  A  G  V  L  V  A  M  M  L  I  C  W  L  H  L  M  M  Q  L  E  M  G  F  M  S  F  L  Y  L  W  A  Q  M  L  P  K  E  I  I  L  V  M  Q  F  L  W  G  H  F  M  L  L  A  V  G  Y  L  *  W  P  P  L  E  M  K  E  P  L  V  Q  P  Q  I  *  L  L  G  *  S  Q  L  Q  P  V  Q  P  I  E  I  L  H  L  M  F  Y  *  E  I  E  F  N  S  R :   V  K  V  L  A  Y  L  K  C  I  H  L  Q  K  S  Y  L  L  L  K  L  M  L  D  T  S  L  L  I  N  P  G  E  A  E   : V  I  A  *  I  V  L  *  I  E  L  R  P  K  G  R  F  L  C  V  D  M  L  E  A  Q  V  S  Q  S  W  R  K  A  I  *  L  N  K  L  V  E  L  G  *  S  L  L  M  K  Q  T  R  V  W  L  F  P  S  P  F  Q  Q  Q  L  L  G  K  R  L  E  K  R  S  *  L  T  L  I  I  H  G  S  L  L  C  *  W  L  L  I  F  V  F  I  V  L  *  C  C  *  Q  S  S  H  L  F  Y  I  Y  S  L  P  T  A  R  I  L  S  A  K  T  V  L  G  A  Q  P  A  P  R  V  T  A  F  S  S  R  G  P  N  S  L  T  P  E  I  L  K  :  P  D  I  T  A  P  G  L  N  I  L  A  A  W  S  P  A  M  S  R  L  K  F  N  I  L  S  G  T  S  M  A  C  P  H  I  S  G  V  V  A  L  L  K  A  V  H  P  S  W  S  P  S  A  I  K  S  A  I  M  T  T   : A  K  L  S  D  M  H  H  K  P  I  I  V  D  P  E  G  K  K  A  N  P  F  D  F  G  S  G  F  V  N  P  T  K  V  L  N  P  G  L  I  Y  D  A  Q  P  E  D  Y  R  A  F  L  C  S  I  G  Y  D  E  K  S  L  H  L  I  T  R  D  N  R  T  C  D  Q  T  F  A  S  P  N  E  L  N  Y  P  S  I  T  V  P  N  L  R  N  N  Y  S  V  S  R  T  V  T  N  V  G  K  S  R  S  T  Y  K  A  V  I  F  A  P  K  G  I  N  V  T  V  V  P  R  R  L  A  F  T  R  Y  Y  Q  K  M  N  F  T  V  T  F  K  V  A  A  P  T  Q  G  Y  V  F  G  S  L  S  W  R  N  K  R  T  W  V  T  S  P  L  V  V  R  V  A  H  S  N  M  G  T  V  V  *  F  S  C  S  A  I  Y  L  C  Y  I  R  *  V  T  R  Y  C  N  Q  *  L  L  K  M  V  A  *  R  S  Q  H  K  I  L  R  R  I  H  V  I  S  S  R  I  Q  I  I  S  N  S  L  F  Y  L  S  F  S  F  E  F  W  F  L  L  P  S  Q  V  L  L  I  G  I  L  Q  I  L  L  L  V  *  *  L  H  Y  V  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0020J02.1" strand="-"/>
                <serials PGL_serial="19" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="132669" stop="132526"/>
                    <exon start="132277" stop="132091"/>
                    <exon start="131881" stop="131319"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>891</number_coding_nucleotides>
                  <number_encoded_amino_acids>297</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QSSHLFYIYSLPTARILSAKTVLGAQPAPRVTAFSSRGPNSLTPEILKPDITAPGLNILAAWSPAMSRLKFNILSGTSMACPHISGVVALLKAVHPSWSPSAIKSAIMTTAKLSDMHHKPIIVDPEGKKANPFDFGSGFVNPTKVLNPGLIYDAQPEDYRAFLCSIGYDEKSLHLITRDNRTCDQTFASPNELNYPSITVPNLRNNYSVSRTVTNVGKSRSTYKAVIFAPKGINVTVVPRRLAFTRYYQKMNFTVTFKVAAPTQGYVFGSLSWRNKRTWVTSPLVVRVAHSNMGTVV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0020J02.1" strand="-"/>
                <serials PGL_serial="19" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="133961" stop="133849"/>
                    <exon start="133763" stop="133241"/>
                    <exon start="133160" stop="133062"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>732</number_coding_nucleotides>
                  <number_encoded_amino_acids>244</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GIWPESPSFRDTHMPPVPAGWKGQCQSGEAFNASICNRKIIGARYYMSGYAAEEDEKIMFKSARDSSGHGSHTASTAAGRYVADMNYKGLASGGARGGAPMARIAVYKTCWSSGCYDVDLLAAFDDAIRDGVHVISISLGPDAPQGDYFSDAISVGSFHAVSRGILVVASVGNEGTSGSATNLAPWMITVAASSTDRDFTSDVLLGNRVQLTGESLSLSQMHTSAKIIPASEAYAGYFTPYQSR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="20" PGL_strand="+" PGL_start="145985" PGL_stop="148872"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="145985" e_stop="146420"/>
            <exon e_start="146520" e_stop="146636"/>
            <exon e_start="147572" e_stop="148832"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.954" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.695" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="145985" e_stop="146420" e_length="436"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.954">
            <gDNA_intron_boundary i_start="146421" i_stop="146519" i_length="99"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="146520" e_stop="146636" e_length="117"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.695">
            <gDNA_intron_boundary i_start="146637" i_stop="147571" i_length="935"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="147572" e_stop="148832" e_length="1261"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="145985" stop="146420"/>
              <exon start="146520" stop="146636"/>
              <exon start="147572" stop="148832"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U586244" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="20" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAGTGAACCTCTTTATCTCTTATTCACAATTGATTGCCATATTCCACCATGAAAATATACAGTGCAAAAAACATCAACAAAAATGGTGGCATTAGCTTCTTCATCTCTCTGCAATTCCCCTTCTTCAATTATCCATTCCTCAAAAACATCTATACCCAATTTCATTACATTCTCTTCCTTAAGTTATTACAAGAAAAGGGGAAAATCGCTTGCAAGTCGTAGCCTTGGAATTGTTGCTGCTACTGAAGGTTCTGTTAACAAATCTAGTGGAAAAGATGAGGAAAAACAAGAAGACCCATCAGTTCCTACATGGGCTAAACCCGGTACGGATGAGCCTCCACCATGGGCTAGAAATGAAGCACAGAAAGATTCTTCAAGCATTCAAGTTCCATTCGTTGTTTATTTGCTTGCTTCTGCTGTCACAGCAATTGCAGCG : ATTGGTTCTATTTTCGAGTACACGAATCAGAAACCTGTGTTTGGAGTTTTGGGTTCAGATAGTGTTTTTTATGCTCCATTGCTTGGGTTCTTTGTGTTCACTGGCATTCCCACTTCT : GCATTCCTTTGGTTCAAATCAGTACAAGTTGCTAACAAGGAGGCTGAGGAACAAGACCGCAGGGATGGATATATGTAACATCTAATATGCAATCTTTAGGTGATATCTGCAGCATCTTATATGCATTTTTCAGATGTTGTTGATGGTTGTTTCCTAAAATACTATCATCGCAAATGAATACTTTCTCGAGGTTTGTTCTTTCTAGAGCAGCATGAGTGTAAAAATTGTCTTCTCAATACCAGTTATTCCGCTTTATCAATTCTAAAAGTCTTTAATCACCAGATTTGACTATTTCCATCTCTCATTTGAAAAAATAGTTTATCGATTTGTGGTTAGACAAGTTACTTGCTGATCTTTTGGCACAACTTGTGTAAGTTATCCACCAATCTGGTGTTGCTTCTTAACTCTTAACATATCGACCTTGGTAAATCACTAATTCTCTATCTTGTCCCTCACTACCAAGACTTAGGAGCTTGAGGCTTTGGTTCACAACGTATTTACTAATAAGTTGTAATAAATAGTCAAAAGAATATTCAAATAGGTCCTGTGAGTTAAATACATAGCATAACTTACAAGTTCAGTCTACTCTCATTTTGATGGTATATCAGCACTTATTCCTTCCTCTTATTTATTAAGTGAACGAAAAAAGTTCACACTCTAATAGCATCATAGCATGTATTGTCTGCTTGCCTTCACATGTCTTTTTGGTTTCAAGTGTTTGTACCTAAGAAACCAGCAAGTCATTTGTTTCTTGGAATTGAGTAGTGATATCTGCAGAATGGTTTGATACTACATTCTACATGTTGTATTTCATTTCTTTGAAATAGGATCGATATAGTTCTTAATCTGAAGACTATCTCTAAAGTATGCTTATATTGCTTTAGTTTACTGTTTCTCATTTTTGTAGTATCTGCCTGAGAATTTCTTGAAAAACTGATCGCGAGCTAGTAAAAAAAAATGTTCAGTCGTTCCACAACATTCTCTCTCCTTCCTCGTTGTGCTATCACACAGAACTCTGAATTTTGCAGTCTACTTCCTTTGAGCTTTTCAACTCTCTGGGGCGGTGAAGTTCATCCATTTCTCCAAGAGAAGAGAAAAGATAGGGAAGCAACATCATATGAAGTCATGTGAACACAACTTTTGTCCCTGTAGGGAGGACAATTGTATTTTTCCCTCAGAAATGAACTTTAATATAGAAATATGTCATGGGCATTTCGAATCAGAAAGGAACTTCAATATAGAAATATGTCATGGGCATTTC</gDNA_template>
            <first_frame> E  *  T  S  L  S  L  I  H  N  *  L  P  Y  S  T  M  K  I  Y  S  A  K  N  I  N  K  N  G  G  I  S  F  F  I  S  L  Q  F  P  F  F  N  Y  P  F  L  K  N  I  Y  T  Q  F  H  Y  I  L  F  L  K  L  L  Q  E  K  G  K  I  A  C  K  S  *  P  W  N  C  C  C  Y  *  R  F  C  *  Q  I  *  W  K  R  *  G  K  T  R  R  P  I  S  S  Y  M  G  *  T  R  Y  G  *  A  S  T  M  G  *  K  *  S  T  E  R  F  F  K  H  S  S  S  I  R  C  L  F  A  C  F  C  C  H  S  N  C  S   : D  W  F  Y  F  R  V  H  E  S  E  T  C  V  W  S  F  G  F  R  *  C  F  L  C  S  I  A  W  V  L  C  V  H  W  H  S  H  F   : C  I  P  L  V  Q  I  S  T  S  C  *  Q  G  G  *  G  T  R  P  Q  G  W  I  Y  V  T  S  N  M  Q  S  L  G  D  I  C  S  I  L  Y  A  F  F  R  C  C  *  W  L  F  P  K  I  L  S  S  Q  M  N  T  F  S  R  F  V  L  S  R  A  A  *  V  *  K  L  S  S  Q  Y  Q  L  F  R  F  I  N  S  K  S  L  *  S  P  D  L  T  I  S  I  S  H  L  K  K  *  F  I  D  L  W  L  D  K  L  L  A  D  L  L  A  Q  L  V  *  V  I  H  Q  S  G  V  A  S  *  L  L  T  Y  R  P  W  *  I  T  N  S  L  S  C  P  S  L  P  R  L  R  S  L  R  L  W  F  T  T  Y  L  L  I  S  C  N  K  *  S  K  E  Y  S  N  R  S  C  E  L  N  T  *  H  N  L  Q  V  Q  S  T  L  I  L  M  V  Y  Q  H  L  F  L  P  L  I  Y  *  V  N  E  K  S  S  H  S  N  S  I  I  A  C  I  V  C  L  P  S  H  V  F  L  V  S  S  V  C  T  *  E  T  S  K  S  F  V  S  W  N  *  V  V  I  S  A  E  W  F  D  T  T  F  Y  M  L  Y  F  I  S  L  K  *  D  R  Y  S  S  *  S  E  D  Y  L  *  S  M  L  I  L  L  *  F  T  V  S  H  F  C  S  I  C  L  R  I  S  *  K  T  D  R  E  L  V  K  K  N  V  Q  S  F  H  N  I  L  S  P  S  S  L  C  Y  H  T  E  L  *  I  L  Q  S  T  S  F  E  L  F  N  S  L  G  R  *  S  S  S  I  S  P  R  E  E  K  R  *  G  S  N  I  I  *  S  H  V  N  T  T  F  V  P  V  G  R  T  I  V  F  F  P  Q  K  *  T  L  I  *  K  Y  V  M  G  I  S  N  Q  K  G  T  S  I  *  K  Y  V  M  G  I   </first_frame>
            <second_frame>  S  E  P  L  Y  L  L  F  T  I  D  C  H  I  P  P  *  K  Y  T  V  Q  K  T  S  T  K  M  V  A  L  A  S  S  S  L  C  N  S  P  S  S  I  I  H  S  S  K  T  S  I  P  N  F  I  T  F  S  S  L  S  Y  Y  K  K  R  G  K  S  L  A  S  R  S  L  G  I  V  A  A  T  E  G  S  V  N  K  S  S  G  K  D  E  E  K  Q  E  D  P  S  V  P  T  W  A  K  P  G  T  D  E  P  P  P  W  A  R  N  E  A  Q  K  D  S  S  S  I  Q  V  P  F  V  V  Y  L  L  A  S  A  V  T  A  I  A  A  :  I  G  S  I  F  E  Y  T  N  Q  K  P  V  F  G  V  L  G  S  D  S  V  F  Y  A  P  L  L  G  F  F  V  F  T  G  I  P  T  S  :  A  F  L  W  F  K  S  V  Q  V  A  N  K  E  A  E  E  Q  D  R  R  D  G  Y  M  *  H  L  I  C  N  L  *  V  I  S  A  A  S  Y  M  H  F  S  D  V  V  D  G  C  F  L  K  Y  Y  H  R  K  *  I  L  S  R  G  L  F  F  L  E  Q  H  E  C  K  N  C  L  L  N  T  S  Y  S  A  L  S  I  L  K  V  F  N  H  Q  I  *  L  F  P  S  L  I  *  K  N  S  L  S  I  C  G  *  T  S  Y  L  L  I  F  W  H  N  L  C  K  L  S  T  N  L  V  L  L  L  N  S  *  H  I  D  L  G  K  S  L  I  L  Y  L  V  P  H  Y  Q  D  L  G  A  *  G  F  G  S  Q  R  I  Y  *  *  V  V  I  N  S  Q  K  N  I  Q  I  G  P  V  S  *  I  H  S  I  T  Y  K  F  S  L  L  S  F  *  W  Y  I  S  T  Y  S  F  L  L  F  I  K  *  T  K  K  V  H  T  L  I  A  S  *  H  V  L  S  A  C  L  H  M  S  F  W  F  Q  V  F  V  P  K  K  P  A  S  H  L  F  L  G  I  E  *  *  Y  L  Q  N  G  L  I  L  H  S  T  C  C  I  S  F  L  *  N  R  I  D  I  V  L  N  L  K  T  I  S  K  V  C  L  Y  C  F  S  L  L  F  L  I  F  V  V  S  A  *  E  F  L  E  K  L  I  A  S  *  *  K  K  M  F  S  R  S  T  T  F  S  L  L  P  R  C  A  I  T  Q  N  S  E  F  C  S  L  L  P  L  S  F  S  T  L  W  G  G  E  V  H  P  F  L  Q  E  K  R  K  D  R  E  A  T  S  Y  E  V  M  *  T  Q  L  L  S  L  *  G  G  Q  L  Y  F  S  L  R  N  E  L  *  Y  R  N  M  S  W  A  F  R  I  R  K  E  L  Q  Y  R  N  M  S  W  A  F  </second_frame>
            <third_frame>   V  N  L  F  I  S  Y  S  Q  L  I  A  I  F  H  H  E  N  I  Q  C  K  K  H  Q  Q  K  W  W  H  *  L  L  H  L  S  A  I  P  L  L  Q  L  S  I  P  Q  K  H  L  Y  P  I  S  L  H  S  L  P  *  V  I  T  R  K  G  E  N  R  L  Q  V  V  A  L  E  L  L  L  L  L  K  V  L  L  T  N  L  V  E  K  M  R  K  N  K  K  T  H  Q  F  L  H  G  L  N  P  V  R  M  S  L  H  H  G  L  E  M  K  H  R  K  I  L  Q  A  F  K  F  H  S  L  F  I  C  L  L  L  L  S  Q  Q  L  Q  R :   L  V  L  F  S  S  T  R  I  R  N  L  C  L  E  F  W  V  Q  I  V  F  F  M  L  H  C  L  G  S  L  C  S  L  A  F  P  L  L :   H  S  F  G  S  N  Q  Y  K  L  L  T  R  R  L  R  N  K  T  A  G  M  D  I  C  N  I  *  Y  A  I  F  R  *  Y  L  Q  H  L  I  C  I  F  Q  M  L  L  M  V  V  S  *  N  T  I  I  A  N  E  Y  F  L  E  V  C  S  F  *  S  S  M  S  V  K  I  V  F  S  I  P  V  I  P  L  Y  Q  F  *  K  S  L  I  T  R  F  D  Y  F  H  L  S  F  E  K  I  V  Y  R  F  V  V  R  Q  V  T  C  *  S  F  G  T  T  C  V  S  Y  P  P  I  W  C  C  F  L  T  L  N  I  S  T  L  V  N  H  *  F  S  I  L  S  L  T  T  K  T  *  E  L  E  A  L  V  H  N  V  F  T  N  K  L  *  *  I  V  K  R  I  F  K  *  V  L  *  V  K  Y  I  A  *  L  T  S  S  V  Y  S  H  F  D  G  I  S  A  L  I  P  S  S  Y  L  L  S  E  R  K  K  F  T  L  *  *  H  H  S  M  Y  C  L  L  A  F  T  C  L  F  G  F  K  C  L  Y  L  R  N  Q  Q  V  I  C  F  L  E  L  S  S  D  I  C  R  M  V  *  Y  Y  I  L  H  V  V  F  H  F  F  E  I  G  S  I  *  F  L  I  *  R  L  S  L  K  Y  A  Y  I  A  L  V  Y  C  F  S  F  L  *  Y  L  P  E  N  F  L  K  N  *  S  R  A  S  K  K  K  C  S  V  V  P  Q  H  S  L  S  F  L  V  V  L  S  H  R  T  L  N  F  A  V  Y  F  L  *  A  F  Q  L  S  G  A  V  K  F  I  H  F  S  K  R  R  E  K  I  G  K  Q  H  H  M  K  S  C  E  H  N  F  C  P  C  R  E  D  N  C  I  F  P  S  E  M  N  F  N  I  E  I  C  H  G  H  F  E  S  E  R  N  F  N  I  E  I  C  H  G  H  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0020J02.1" strand="+"/>
                <serials PGL_serial="20" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="146037" stop="146420"/>
                    <exon start="146520" stop="146636"/>
                    <exon start="147572" stop="147649"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>576</number_coding_nucleotides>
                  <number_encoded_amino_acids>192</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KYTVQKTSTKMVALASSSLCNSPSSIIHSSKTSIPNFITFSSLSYYKKRGKSLASRSLGIVAATEGSVNKSSGKDEEKQEDPSVPTWAKPGTDEPPPWARNEAQKDSSSIQVPFVVYLLASAVTAIAAIGSIFEYTNQKPVFGVLGSDSVFYAPLLGFFVFTGIPTSAFLWFKSVQVANKEAEEQDRRDGYM*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0020J02.1" strand="+"/>
                <serials PGL_serial="20" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="148614" stop="148832"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>219</number_coding_nucleotides>
                  <number_encoded_amino_acids>73</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AFQLSGAVKFIHFSKRREKIGKQHHMKSCEHNFCPCREDNCIFPSEMNFNIEICHGHFESERNFNIEICHGHF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="146092" e_stop="146420"/>
            <exon e_start="146520" e_stop="146636"/>
            <exon e_start="147572" e_stop="147645"/>
            <exon e_start="148600" e_stop="148872"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.954" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.695" e_score="1.000"/>
          <exon-intron don_prob="0.985" acc_prob="0.568" e_score="1.000"/>
          <exon-only e_score="0.949"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="146092" e_stop="146420" e_length="329"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.954">
            <gDNA_intron_boundary i_start="146421" i_stop="146519" i_length="99"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="146520" e_stop="146636" e_length="117"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.695">
            <gDNA_intron_boundary i_start="146637" i_stop="147571" i_length="935"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="147572" e_stop="147645" e_length="74"/>
          </exon>
          <intron i_serial="3" don_prob="0.985" acc_prob="0.568">
            <gDNA_intron_boundary i_start="147646" i_stop="148599" i_length="954"/>
          </intron>
          <exon e_serial="4" e_score="0.949">
            <gDNA_exon_boundary e_start="148600" e_stop="148872" e_length="273"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="146092" stop="146420"/>
              <exon start="146520" stop="146636"/>
              <exon start="147572" stop="147645"/>
              <exon start="148600" stop="148872"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U587018" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="20" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCTGCAATTCCCCTTCTTCAATTATCCATTCCTCAAAAACATCTATACCCAATTTCATTACATTCTCTTCCTTAAGTTATTACAAGAAAAGGGGAAAATCGCTTGCAAGTCGTAGCCTTGGAATTGTTGCTGCTACTGAAGGTTCTGTTAACAAATCTAGTGGAAAAGATGAGGAAAAACAAGAAGACCCATCAGTTCCTACATGGGCTAAACCCGGTACGGATGAGCCTCCACCATGGGCTAGAAATGAAGCACAGAAAGATTCTTCAAGCATTCAAGTTCCATTCGTTGTTTATTTGCTTGCTTCTGCTGTCACAGCAATTGCAGCG : ATTGGTTCTATTTTCGAGTACACGAATCAGAAACCTGTGTTTGGAGTTTTGGGTTCAGATAGTGTTTTTTATGCTCCATTGCTTGGGTTCTTTGTGTTCACTGGCATTCCCACTTCT : GCATTCCTTTGGTTCAAATCAGTACAAGTTGCTAACAAGGAGGCTGAGGAACAAGACCGCAGGGATGGATATAT : TCTACTTCCTTTGAGCTTTTCAACTCTCTGGGGCGGTGAAGTTCATCCATTTCTCCAAGAGAAGAGAAAAGATAGGGAAGCAACATCATATGAAGTCATGTGAACACAACTTTTGTCCCTGTAGGGAGGACAATTGTATTTTTCCCTCAGAAATGAACTTTAATATAGAAATATGTCATGGGCATTTCGAATCAGAAAGGAACTTCAATATAGAAATATGTCATGGGCATTTCAAATATAAATGCATAGTGATTGCACTCAAACTATTTGGCT</gDNA_template>
            <first_frame> S  A  I  P  L  L  Q  L  S  I  P  Q  K  H  L  Y  P  I  S  L  H  S  L  P  *  V  I  T  R  K  G  E  N  R  L  Q  V  V  A  L  E  L  L  L  L  L  K  V  L  L  T  N  L  V  E  K  M  R  K  N  K  K  T  H  Q  F  L  H  G  L  N  P  V  R  M  S  L  H  H  G  L  E  M  K  H  R  K  I  L  Q  A  F  K  F  H  S  L  F  I  C  L  L  L  L  S  Q  Q  L  Q  R :   L  V  L  F  S  S  T  R  I  R  N  L  C  L  E  F  W  V  Q  I  V  F  F  M  L  H  C  L  G  S  L  C  S  L  A  F  P  L  L :   H  S  F  G  S  N  Q  Y  K  L  L  T  R  R  L  R  N  K  T  A  G  M  D  I   : F  Y  F  L  *  A  F  Q  L  S  G  A  V  K  F  I  H  F  S  K  R  R  E  K  I  G  K  Q  H  H  M  K  S  C  E  H  N  F  C  P  C  R  E  D  N  C  I  F  P  S  E  M  N  F  N  I  E  I  C  H  G  H  F  E  S  E  R  N  F  N  I  E  I  C  H  G  H  F  K  Y  K  C  I  V  I  A  L  K  L  F  G  </first_frame>
            <second_frame>  L  Q  F  P  F  F  N  Y  P  F  L  K  N  I  Y  T  Q  F  H  Y  I  L  F  L  K  L  L  Q  E  K  G  K  I  A  C  K  S  *  P  W  N  C  C  C  Y  *  R  F  C  *  Q  I  *  W  K  R  *  G  K  T  R  R  P  I  S  S  Y  M  G  *  T  R  Y  G  *  A  S  T  M  G  *  K  *  S  T  E  R  F  F  K  H  S  S  S  I  R  C  L  F  A  C  F  C  C  H  S  N  C  S   : D  W  F  Y  F  R  V  H  E  S  E  T  C  V  W  S  F  G  F  R  *  C  F  L  C  S  I  A  W  V  L  C  V  H  W  H  S  H  F   : C  I  P  L  V  Q  I  S  T  S  C  *  Q  G  G  *  G  T  R  P  Q  G  W  I  Y  :  S  T  S  F  E  L  F  N  S  L  G  R  *  S  S  S  I  S  P  R  E  E  K  R  *  G  S  N  I  I  *  S  H  V  N  T  T  F  V  P  V  G  R  T  I  V  F  F  P  Q  K  *  T  L  I  *  K  Y  V  M  G  I  S  N  Q  K  G  T  S  I  *  K  Y  V  M  G  I  S  N  I  N  A  *  *  L  H  S  N  Y  L  A </second_frame>
            <third_frame>   C  N  S  P  S  S  I  I  H  S  S  K  T  S  I  P  N  F  I  T  F  S  S  L  S  Y  Y  K  K  R  G  K  S  L  A  S  R  S  L  G  I  V  A  A  T  E  G  S  V  N  K  S  S  G  K  D  E  E  K  Q  E  D  P  S  V  P  T  W  A  K  P  G  T  D  E  P  P  P  W  A  R  N  E  A  Q  K  D  S  S  S  I  Q  V  P  F  V  V  Y  L  L  A  S  A  V  T  A  I  A  A  :  I  G  S  I  F  E  Y  T  N  Q  K  P  V  F  G  V  L  G  S  D  S  V  F  Y  A  P  L  L  G  F  F  V  F  T  G  I  P  T  S  :  A  F  L  W  F  K  S  V  Q  V  A  N  K  E  A  E  E  Q  D  R  R  D  G  Y  I :   L  L  P  L  S  F  S  T  L  W  G  G  E  V  H  P  F  L  Q  E  K  R  K  D  R  E  A  T  S  Y  E  V  M  *  T  Q  L  L  S  L  *  G  G  Q  L  Y  F  S  L  R  N  E  L  *  Y  R  N  M  S  W  A  F  R  I  R  K  E  L  Q  Y  R  N  M  S  W  A  F  Q  I  *  M  H  S  D  C  T  Q  T  I  W   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0020J02.1" strand="+"/>
                <serials PGL_serial="20" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="146094" stop="146420"/>
                    <exon start="146520" stop="146636"/>
                    <exon start="147572" stop="147645"/>
                    <exon start="148600" stop="148702"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>618</number_coding_nucleotides>
                  <number_encoded_amino_acids>206</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CNSPSSIIHSSKTSIPNFITFSSLSYYKKRGKSLASRSLGIVAATEGSVNKSSGKDEEKQEDPSVPTWAKPGTDEPPPWARNEAQKDSSSIQVPFVVYLLASAVTAIAAIGSIFEYTNQKPVFGVLGSDSVFYAPLLGFFVFTGIPTSAFLWFKSVQVANKEAEEQDRRDGYILLPLSFSTLWGGEVHPFLQEKRKDREATSYEVM*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 41 chains have been computed
$ 
$ memory statistics:
$ 67528 bytes spliced alignments in total
$ 31 spliced alignments have been stored
$ 2178 bytes was the average size of a spliced alignment
$ 31232 bytes predicted gene locations in total
$ 20 predicted gene locations have been stored
$ 1561 bytes was the average size of a predicted gene location
$ 1 megabytes was the average size of the backtrace matrix
$ 45 backtrace matrices have been allocated
$ 
$ date finished: 2009-12-01 11:32:00
-->
