<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-12-01 11:14:39"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02SLm0014P22-osNUq/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U584013" ref_strand="+" ref_description="SGN-U584013 Tomato 200607#2 [5 ESTs aligned] (*GB) gi|29373073|gb|AAO72532.1| (e_value=4e-58) aldehyde dehydrogenase 1 precursor [Lotus corniculatus]; (*ATH) AT3G48000.1 (e_value=2e-57)  Symbol: None | aldehyde dehydrogenase (ALDH2), identical to aldehyde dehydrogenase (Arabidopsis thaliana) GI:8574427; similar to mitochondrial aldehyde dehydrogenase (Arabidopsis thaliana) gi:19850249:gb:AAL99612; identical to cDNA aldehyde dehydrog... ; (*SWP) sp|Q9SU63|AL2B4_ARATH (e_value=2e-56) Aldehyde dehydrogenase family 2 member B4, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B4; ">
      <seq>ggtcttttaacacgcttgaaacccccacaaggtccaagggagtttcagtatcaaatttgaaatgttggattgtataaaggagtgtcagaacacggtatttcagtttcaacatatctctaggtagcaatgaagctatccgtcgctaattctaccccctcttccatcccaaagaagattaaaagaagtaaatagcctaattatagtgtctcattagatagtataatccacatgtagaaaatgaagaaaatcatatctttttcttccagcttccccattaaaagtcaataaacaacataaagaggttatgcatcctgatgtcctttcagcttttgtatttcatgcttgcttttattgatgcagctgtgatgtgtaaagttttctgagtgaatactctggaatagatgagggagactgaaggagcactgacatcttctactacttgttttcgtatagatttaaacagcttggtcctcgacattacttgcatcttttccccctgtaaaatgtttttttttggtgattttttaatttttctgtgatgtctaaattgcgatgtgtctctacatcactccttttggtgtctacagattgcttttacagggtccacagaaactggtaaagctgtcgtaggtgcagctgcaaagagcaacctaaaacctgtgacattggagctcggaggaaaatctcctttcatcatttgtgaagatgcagacgttgataaagctgttgagttggctcattctgctgttttctttaaccagggacaatgctgctgtgctggatctcggacattcgtacatgaaagagtatatgatgaatttgtggagaaagccaaagctcgtgctttaaaacgcattgttggagaccctttcaagaagggagttgaacaaggtccgcagattgatacagagcaatttgagaagatcctgaagtacataaaatctggtactgaaagcgggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0014P22.2" temp_strand="-" temp_description="C02SLm0014P22.2  AC215471.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0014P22 sequenced_by:kribb upload_account_name:korea">
        <position start="1559" stop="1"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1249" g_stop="521" g_length="729"/>
          <reference_exon_boundary r_type="cDNA" r_start="33" r_stop="761" r_length="729" r_score="0.999"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="520" i_stop="442" i_length="79">
            <donor d_prob="0.933" d_score="1.00"/>
            <acceptor a_prob="0.857" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="441" g_stop="304" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="762" r_stop="899" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="303" i_stop="24" i_length="280">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="23" g_stop="1" g_length="23"/>
          <reference_exon_boundary r_type="cDNA" r_start="900" r_stop="922" r_length="23" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0014P22.2" gen_strand="-" ref_id="SGN-U584013" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>890</cumulative_length_of_scored_exons>
        <coverage percentage="0.927" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0014P22.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U584013" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1249" e_stop="521"/>
          <exon e_start="441" e_stop="304"/>
          <exon e_start="23" e_stop="1"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCAAGGCAGTTTCAGTATCAAATTTGAAATGTTGGATTGTATAAAGGAGTGTCAGAACACGGTATTTCAGTTTCAACATATCTCTAGGTAGCAATGAAGCTATCCGTCGCTAATTCTACCCCCTCTTCCATCCCAAAGAAGATTAAAAGAAGTAAATAGCCTAATTATAGTGTCTCATTAGATAGTATAATCCACATGTAGAAAATGAAGAAAATCATATCTTTTTCTTCCAGCTTCCCCATTAAAAGTCAATAAACAACATAAAGAGGTTATGCATCCTGATGTCCTTTCAGCTTTTGTATTTCATGCTTGCTTTTATTGATGCAGCTGTGATGTGTAAAGTTTTCTGAGTGAATACTCTGGAATAGATGAGGGAGACTGAAGGAGCACTGACATCTTCTACTACTTGTTTTCGTATAGATTTAAACAGCTTGGTCCTCGACATTACTTGCATCTTTTCCCCCTGTAAAATGTTTTTTTTTGGTGATTTTTTAATTTTTCTGTGATGTCTAAATTGCGATGTGTCTCTACATCACTCCTTTTGGTGTCTACAGATTGCTTTTACAGGGTCCACAGAAACTGGTAAAGCTGTCGTAGGTGCAGCTGCAAAGAGCAACCTAAAACCTGTGACATTGGAGCTCGGAGGAAAATCTCCTTTCATCATTTGTGAAGATGCAGACGTTGATAAAGCTGTTGAGTTGGCTCATTCTGCTGTTTTCTTTAACCAGGTAGCAAAAATTTCCACTCTTGGAAAATTGCAACCTCTGATGCTTGCTCCAGAATGGAATAAATTTCAAGTATCTGCAGGGACAATGCTGCTGTGCTGGATCTCGGACATTCGTACATGAAAGAGTATATGATGAATTTGTGGAGAAAGCCAAAGCTCGTGCTTTAAAACGCATTGTTGGAGACCCTTTCAAGAAGGGAGTTGAACAAGGTCCGCAGGTACTGTTTTTTCGTGTATCGCTGTCCCCTCTGTCATGGATAATATATAAAAAGAGAATAGTTAAACAAATTCTTTGCCAACTTAAGGACAAGAAGGAATAATATATGTTCACCAATTTGGATGTAGCCAACTTTTCAGGCAATGGTACCTTTATTATTTCCTTTTCAGCATCTTACACAAACTTAAATCATGAATTTCCAGCAAAGAGAAGTAGTAATTACGGACTTCCATTTACATTTCTGAAGTAGTTGTAACATGAATGTTTTGTGTTATCAATAGATTGATACAGAGCAATTTGAGAA</genome_strand>
        <mrna_strand>TCCAAGGGAGTTTCAGTATCAAATTTGAAATGTTGGATTGTATAAAGGAGTGTCAGAACACGGTATTTCAGTTTCAACATATCTCTAGGTAGCAATGAAGCTATCCGTCGCTAATTCTACCCCCTCTTCCATCCCAAAGAAGATTAAAAGAAGTAAATAGCCTAATTATAGTGTCTCATTAGATAGTATAATCCACATGTAGAAAATGAAGAAAATCATATCTTTTTCTTCCAGCTTCCCCATTAAAAGTCAATAAACAACATAAAGAGGTTATGCATCCTGATGTCCTTTCAGCTTTTGTATTTCATGCTTGCTTTTATTGATGCAGCTGTGATGTGTAAAGTTTTCTGAGTGAATACTCTGGAATAGATGAGGGAGACTGAAGGAGCACTGACATCTTCTACTACTTGTTTTCGTATAGATTTAAACAGCTTGGTCCTCGACATTACTTGCATCTTTTCCCCCTGTAAAATGTTTTTTTTTGGTGATTTTTTAATTTTTCTGTGATGTCTAAATTGCGATGTGTCTCTACATCACTCCTTTTGGTGTCTACAGATTGCTTTTACAGGGTCCACAGAAACTGGTAAAGCTGTCGTAGGTGCAGCTGCAAAGAGCAACCTAAAACCTGTGACATTGGAGCTCGGAGGAAAATCTCCTTTCATCATTTGTGAAGATGCAGACGTTGATAAAGCTGTTGAGTTGGCTCATTCTGCTGTTTTCTTTAACCAG...............................................................................GGACAATGCTGCTGTGCTGGATCTCGGACATTCGTACATGAAAGAGTATATGATGAATTTGTGGAGAAAGCCAAAGCTCGTGCTTTAAAACGCATTGTTGGAGACCCTTTCAAGAAGGGAGTTGAACAAGGTCCGCAG........................................................................................................................................................................................................................................................................................ATTGATACAGAGCAATTTGAGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U584018" ref_strand="+" ref_description="SGN-U584018 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|116786856|gb|ABK24267.1| (e_value=3e-68) unknown; (*ATH) AT3G48000.1 (e_value=3e-64)  Symbol: None | aldehyde dehydrogenase (ALDH2), identical to aldehyde dehydrogenase (Arabidopsis thaliana) GI:8574427; similar to mitochondrial aldehyde dehydrogenase (Arabidopsis thaliana) gi:19850249:gb:AAL99612; identical to cDNA aldehyde dehydrog... ; (*SWP) sp|Q9SU63|AL2B4_ARATH (e_value=3e-63) Aldehyde dehydrogenase family 2 member B4, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B4; ">
      <seq>ggaaaggtcatgtataatgttgcagtttgctgatttgcttgagaggcacgagtgatgaacttgcagcacttgagacttgggataagggaaagccttacgaacaagctgcaaatgaagaaataccaatgctcattcgtcttttcagatactatgctggttaagaaaataagaaaaatggcgttgggctgataaaattcatggtcttacagctcctgctgacagtttgcaccatgttcagaccctgcatgagccaattggtgttgcaggacagataataccctggaattttccgttattaatgttcgcctggaaagttggccctgcacttgcttgtggtaacactgtcgtactaaaaccagcagaacaaacaccactctctgccctgtatgtgtcaaagttattccatgaggttggacttccccctggagtcttaaatgtcattcctggatccggtagtgcaggtgcagatcttgccagtcatatggatgtcgataagattgcttttacagggtccacagaaactggtaaagctgtcgtatgtgcagctgcaaagagcaacctaaaacctgtgacattggagctcggaggaaaatctcctttcatcatttgtga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0014P22.2" temp_strand="-" temp_description="C02SLm0014P22.2  AC215471.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0014P22 sequenced_by:kribb upload_account_name:korea">
        <position start="2468" stop="279"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2168" g_stop="1991" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="179" r_length="179" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="1990" i_stop="1874" i_length="117">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="1873" g_stop="1644" g_length="230"/>
          <reference_exon_boundary r_type="cDNA" r_start="180" r_stop="409" r_length="230" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="1643" i_stop="1425" i_length="219">
            <donor d_prob="0.959" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="1424" g_stop="1338" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="410" r_stop="496" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="1337" i_stop="695" i_length="643">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="694" g_stop="579" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="497" r_stop="612" r_length="116" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0014P22.2" gen_strand="-" ref_id="SGN-U584018" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>611</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0014P22.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U584018" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2168" e_stop="1991"/>
          <exon e_start="1873" e_stop="1644"/>
          <exon e_start="1424" e_stop="1338"/>
          <exon e_start="694" e_stop="579"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCAC-AGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGTTAAGAAAATAAGAAAAATGGCGTTATGTTTCCTTTTGACAGTTTAATAACCACTTATTGTATATCAATTGACGTTCTAATGTTTGCTGAATCACCCTAAATGCTTTTCTAAGTATTTCTGCTTACATTTCTTATTCAGGTTGGGCTGATAAAATTCATGGTCTTACAGCTCCTGCTGACAGTTTGCACCATGTTCAGACCCTGCATGAGCCAATTGGTGTTGCAGGACAGATAATACCCTGGAATTTTCCGTTATTAATGTTCGCCTGGAAAGTTGGCCCTGCACTTGCTTGTGGTAACACTGTCGTACTAAAACCAGCAGAACAAACACCACTCTCTGCCCTGTATGTGTCAAAGTTATTCCATGAGGTATATAACCATTTTTAGTCTGCACCGGTCGTGAATTCACAGAATTCTAATGAGTACTCATTTGTACTTGTCATTTAGTTATTTCTAGTATGTTGTTTACAAATTTAGTAGTTTCAAATATAGAAGTGGAAACTTTCCACAATTATTGCAGCTCAAATCGAAGATTTCTCCATCTATACAAGATGATAGAATGTAATTTGTCTTCACTCCAACTGTCAGGTTGGACTTCCCCCTGGAGTCTTAAATGTCATTCCTGGATCCGGTAGTGCAGGTGCAGATCTTGCCAGTCATATGGATGTCGATAAGGTATTTTCTGAGTTTTGGCTTTAGTTCCTGAATAGGAATTTACAGAAGAAATGGCTTATGTTTCTTCTGATAAACCTACACGACAAAGTCCAAGGCAGTTTCAGTATCAAATTTGAAATGTTGGATTGTATAAAGGAGTGTCAGAACACGGTATTTCAGTTTCAACATATCTCTAGGTAGCAATGAAGCTATCCGTCGCTAATTCTACCCCCTCTTCCATCCCAAAGAAGATTAAAAGAAGTAAATAGCCTAATTATAGTGTCTCATTAGATAGTATAATCCACATGTAGAAAATGAAGAAAATCATATCTTTTTCTTCCAGCTTCCCCATTAAAAGTCAATAAACAACATAAAGAGGTTATGCATCCTGATGTCCTTTCAGCTTTTGTATTTCATGCTTGCTTTTATTGATGCAGCTGTGATGTGTAAAGTTTTCTGAGTGAATACTCTGGAATAGATGAGGGAGACTGAAGGAGCACTGACATCTTCTACTACTTGTTTTCGTATAGATTTAAACAGCTTGGTCCTCGACATTACTTGCATCTTTTCCCCCTGTAAAATGTTTTTTTTTGGTGATTTTTTAATTTTTCTGTGATGTCTAAATTGCGATGTGTCTCTACATCACTCCTTTTGGTGTCTACAGATTGCTTTTACAGGGTCCACAGAAACTGGTAAAGCTGTCGTAGGTGCAGCTGCAAAGAGCAACCTAAAACCTGTGACATTGGAGCTCGGAGGAAAATCTCCTTTCATCATTTGTGA</genome_strand>
        <mrna_strand>GGAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACGAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGTTAAGAAAATAAGAAAAATGGC.....................................................................................................................GTTGGGCTGATAAAATTCATGGTCTTACAGCTCCTGCTGACAGTTTGCACCATGTTCAGACCCTGCATGAGCCAATTGGTGTTGCAGGACAGATAATACCCTGGAATTTTCCGTTATTAATGTTCGCCTGGAAAGTTGGCCCTGCACTTGCTTGTGGTAACACTGTCGTACTAAAACCAGCAGAACAAACACCACTCTCTGCCCTGTATGTGTCAAAGTTATTCCATGAG...........................................................................................................................................................................................................................GTTGGACTTCCCCCTGGAGTCTTAAATGTCATTCCTGGATCCGGTAGTGCAGGTGCAGATCTTGCCAGTCATATGGATGTCGATAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCTTTTACAGGGTCCACAGAAACTGGTAAAGCTGTCGTATGTGCAGCTGCAAAGAGCAACCTAAAACCTGTGACATTGGAGCTCGGAGGAAAATCTCCTTTCATCATTTGTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U584014" ref_strand="+" ref_description="SGN-U584014 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|157345500|emb|CAO14798.1| (e_value=2e-109) unnamed; (*ATH) AT1G23800.1 (e_value=7e-103)  Symbol: None | aldehyde dehydrogenase, mitochondrial (ALDH3), nearly identical to mitochondrial aldehyde dehydrogenase ALDH3 (Arabidopsis thaliana) gi:19850249:gb:AAL99612; contains Pfam profile PF00171: aldehyde dehydrogenase (NAD) family protein |... ; (*SWP) sp|Q8S528|AL2B7_ARATH (e_value=6e-102) Aldehyde dehydrogenase family 2 member B7, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B7; ">
      <seq>gacattatgctttgtatgaaataaaggtcctctaagatttctgtaagcaactttgaaaatttctttaggtactccaactactggagaaagggtatcagaaggttttgtagcagtgccgtggtgcatgaagagccaatcactccacctgttgaggttaaatataatcagcttctcattaatggacagtttgttgatgcagcctcagggaagacatttcctacatttgaccctcgaacaggcgaagctattactacggttgcggaggccgacactgaagatgtcaaccgtgcagtctttgctgcccgtaaagcatttgatgaaggaccatggcctaaaatgacttgtgcagaaaggtcatgtataatgttgcagtttgctgatttgcttgagaggcacagtgatgaacttgcagcacttgagacttgggataagggaaagccttacgaacaagctgcaaatgaagaaataccaatgctcattcgtcttttcagatactatgctggttgggctgataaaattcatggtcttacagctcctgctgacagtttgcaccatgttcagaccctgcatgagccaattggtgttgcaggacagataataccctggaattttccgttattaatgttcgcctggaaagttggccctgcacttgcttgtggtaacactgtcgtactaaaaccagcagaacaaacaccactctctgccctgtatgtgtcaaagttattccatgaggttggacttccccctggagtcttaaatgtcattcctggatccggtagtgcaggtgcagatcttgccagtcatatggatgtcgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0014P22.2" temp_strand="-" temp_description="C02SLm0014P22.2  AC215471.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0014P22 sequenced_by:kribb upload_account_name:korea">
        <position start="5022" stop="1041"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4723" g_stop="4660" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="64" r_length="64" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="4659" i_stop="2978" i_length="1682">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.901" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="2977" g_stop="2837" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="65" r_stop="205" r_length="141" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="2836" i_stop="2758" i_length="79">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.750" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="2757" g_stop="2615" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="206" r_stop="348" r_length="143" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="2614" i_stop="2168" i_length="447">
            <donor d_prob="0.793" d_score="1.00"/>
            <acceptor a_prob="0.922" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="2167" g_stop="2014" g_length="154"/>
          <reference_exon_boundary r_type="cDNA" r_start="349" r_stop="502" r_length="154" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="2013" i_stop="1874" i_length="140">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="1873" g_stop="1644" g_length="230"/>
          <reference_exon_boundary r_type="cDNA" r_start="503" r_stop="732" r_length="230" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="1643" i_stop="1425" i_length="219">
            <donor d_prob="0.959" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="1424" g_stop="1341" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="733" r_stop="816" r_length="84" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0014P22.2" gen_strand="-" ref_id="SGN-U584014" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>816</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0014P22.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U584014" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4723" e_stop="4660"/>
          <exon e_start="2977" e_stop="2837"/>
          <exon e_start="2757" e_stop="2615"/>
          <exon e_start="2167" e_stop="2014"/>
          <exon e_start="1873" e_stop="1644"/>
          <exon e_start="1424" e_stop="1341"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACATTATGCTTTGTATGAAATAAAGGTCCTCTAAGATTTCTGTAAGCAACTTTGAAAATTTCTGTAAGTTCTTCTTTATTTAAATTCCGCAACTATGAAAATGGTAAGGAAAGAGTATGATTGTAGCTTCTCTTGTTCACTGATGACATGACAGTGTGAATAATTTTGATCAACTATGATTTAATCAGTTAAAAGTAATCTATTTATCTTATTTTTGAAATGACTAGTTTGGCTTTAGATGGTACTATAAAGTAGACCTCATTATTTTAGGTTACGCAGAGTGTTTACTTGATTGTCTAAACAAAATTTAGAAATAAATTTTGAACCTAAGCTAAACACAGAGTTAAAGGGTTTCATTTAATCATTAAATTTGTCCTCCGTTATAGTTCTTTTAAGGGAAAGCTCCGAATCAACCCATTTTATCCAAAAATGAAAAGATAAAACCACCCGCCCCTAATATAACCCGCATCCGACCAACTAACATGTAAAACCCACCCAAGTCCAAAGAAAGCAAAACTAACCCTTTAACGGCGGCGGCGGCGGCAGCGACGGCGCAACTTTTTTCCATGAGTTGATTTCCAAGAAAATGGAAATAACTTTGCCCGCATTGGATCTAACTAACAACTTATTGTTCTACCCAAGTCCAAGAAATCAAAAACAAACCCATATAATGGTAGCGTGGCGGCGGCGCGTCTTCTTCAATGGTTTCCAGGAGAAGGGGAAATAACTTTACCCACATCCGACCCAACTAACAAGTAAACCATCTTTCCCGTTATAGTTCTACCCAGGTCCAAGAAGGCAAATACAAACCCCTCTGGGCGTGGCAGCGGCGCATCTTCTTCCATGTCTTCCAAGAAAAGGGAAAATAACTTTGCCTTTTCCCATCTTCTACAGTTCCCTTAATTTTGCATTTTTTTAGAATCTAACTCAACAGTCCCTTTATGGACTTCATCACTTCTAACCAAACACAAATCCAACTAAGAAGAGATAAAACTCAATAAAATGAATAGCGTCCCAGAGGAAAATCTCAACACCTGAGTAGACATAAAAAAGAATCAACTTAGCAGTTAAATAAAATATCACATCATCAACAGCAGAAGTTGCCGCCTGAATCGCCACGAACCCAACCACAAAAGCAGAGACAAATTTCCCTTGCTGAAAGAATCAGCCCAAATCCACTACATTCTTGTACTGCAATTCCAATTACACTTGCCTCGAAATTGCCGCAAATACAGTAACTTGGTGACTTTTGAGGAAGATGGAAAAATTGATTCTTTTCTATTGGGTGGACAAACTCACCAAGAGTAATTAAAAATAAATATGGTCTGTTTTGAGGTTGAAGTTTAATTCAGGTGACATAGTACTTTGCTGGGTTTTGAGGAAACTGGAACAGTATTTGTTTTTTAATCATAATGTTGAGTTTATTTAATTTGGTTCGGATTTTAATTTGATGGGTTTGCGGTCGGATTCATTCTAACCAATAAAAGAATGTTGATGGTTATTTTATCTCCAATAACTATATTGCAAGTACTTGTAAACCAAAAATACATTCACAGATTATAATTAAAGTAGTCTTTTTCTAATCAGAAGAATTATTTTCACCCGTGTTTTCTTTCTTTGGTATCTTGATGATTGAACAAGCTAACTGTGTCTTGATATTACCCCACTTGATTTGTTTGATATTTTAACTGATTTTCTTGAGAAAGGAGCTAGCTAATTATAGGTTCTGCAATTTCAATCTACAGTTAGGTACTCCAACTACTGGAGAAAGGGTATCAGAAGGTTTTGTAGCAGTGCCGTGGTGCATGAAGAGCCAATCACTCCACCTGTTGAGGTTAAATATAATCAGCTTCTCATTAATGGACAGTTTGTTGATGCAGCCTCAGGTTGACCTAAAGTCTTTTCATTTATATGTTATTTCTTCTATAAATCTCAAGTGTAATATGGAGAATTCTACGTCTTCAGGGAAGACATTTCCTACATTTGACCCTCGAACAGGCGAAGCTATTACTACGGTTGCGGAGGCCGACACTGAAGATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAAGGACCATGGCCTAAAATGACTTGTGCAGTAACCGAACTTTCTTATCTTTCCATATCCTCTTCCTTGTCCCAACAGTGAGAGGCGGATTTAGAATTTGAACTTAACATGTTCAACCTTTAAGGTTCTTATCGCTGAACACATTGATCTATCGGACATACGTGTTTAGATTTTAATATTCTCTCATTTTAGTACTTTCACATATATATTTATTTCCTGTATTATATGGTCCCTCTACCGAAGTTAATTTCTCAGTTGGTCGTTCAACTAATAGTAATTATTTGAGTAATATAAGTCACTTTCTTTGTTGAAGAAAATTGGAATCAAGTTGAAAAATGACTTCTTGAGATAATAACTATTTAGCAAAGTGACCATATGAGAAATCAATCCGCCTCTGCAGACAACTACAGCTTGTTTAAACTCCCAGTCTTACTTAAGCATGTACAATAATGTACTTACTTAACCAAATATTTCCAGGAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGTTAAGAAAATAAGAAAAATGGCGTTATGTTTCCTTTTGACAGTTTAATAACCACTTATTGTATATCAATTGACGTTCTAATGTTTGCTGAATCACCCTAAATGCTTTTCTAAGTATTTCTGCTTACATTTCTTATTCAGGTTGGGCTGATAAAATTCATGGTCTTACAGCTCCTGCTGACAGTTTGCACCATGTTCAGACCCTGCATGAGCCAATTGGTGTTGCAGGACAGATAATACCCTGGAATTTTCCGTTATTAATGTTCGCCTGGAAAGTTGGCCCTGCACTTGCTTGTGGTAACACTGTCGTACTAAAACCAGCAGAACAAACACCACTCTCTGCCCTGTATGTGTCAAAGTTATTCCATGAGGTATATAACCATTTTTAGTCTGCACCGGTCGTGAATTCACAGAATTCTAATGAGTACTCATTTGTACTTGTCATTTAGTTATTTCTAGTATGTTGTTTACAAATTTAGTAGTTTCAAATATAGAAGTGGAAACTTTCCACAATTATTGCAGCTCAAATCGAAGATTTCTCCATCTATACAAGATGATAGAATGTAATTTGTCTTCACTCCAACTGTCAGGTTGGACTTCCCCCTGGAGTCTTAAATGTCATTCCTGGATCCGGTAGTGCAGGTGCAGATCTTGCCAGTCATATGGATGTCGAT</genome_strand>
        <mrna_strand>GACATTATGCTTTGTATGAAATAAAGGTCCTCTAAGATTTCTGTAAGCAACTTTGAAAATTTCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGGTACTCCAACTACTGGAGAAAGGGTATCAGAAGGTTTTGTAGCAGTGCCGTGGTGCATGAAGAGCCAATCACTCCACCTGTTGAGGTTAAATATAATCAGCTTCTCATTAATGGACAGTTTGTTGATGCAGCCTCAG...............................................................................GGAAGACATTTCCTACATTTGACCCTCGAACAGGCGAAGCTATTACTACGGTTGCGGAGGCCGACACTGAAGATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAAGGACCATGGCCTAAAATGACTTGTGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTG............................................................................................................................................GTTGGGCTGATAAAATTCATGGTCTTACAGCTCCTGCTGACAGTTTGCACCATGTTCAGACCCTGCATGAGCCAATTGGTGTTGCAGGACAGATAATACCCTGGAATTTTCCGTTATTAATGTTCGCCTGGAAAGTTGGCCCTGCACTTGCTTGTGGTAACACTGTCGTACTAAAACCAGCAGAACAAACACCACTCTCTGCCCTGTATGTGTCAAAGTTATTCCATGAG...........................................................................................................................................................................................................................GTTGGACTTCCCCCTGGAGTCTTAAATGTCATTCCTGGATCCGGTAGTGCAGGTGCAGATCTTGCCAGTCATATGGATGTCGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U594105" ref_strand="+" ref_description="SGN-U594105 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157345500|emb|CAO14798.1| (e_value=4e-65) unnamed; (*ATH) AT1G23800.1 (e_value=1e-60)  Symbol: None | aldehyde dehydrogenase, mitochondrial (ALDH3), nearly identical to mitochondrial aldehyde dehydrogenase ALDH3 (Arabidopsis thaliana) gi:19850249:gb:AAL99612; contains Pfam profile PF00171: aldehyde dehydrogenase (NAD) family protein |... ; (*SWP) sp|Q8S528|AL2B7_ARATH (e_value=1e-59) Aldehyde dehydrogenase family 2 member B7, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B7; ">
      <seq>ctctctctttatgtaaacattatgctttgtatgaaataaaggtcctctaagatttctgtaagcaactttgaaaatttctttaggtactccaactactggagaaagggtatcagaaggttttgtagcagtgccgtggtgcatgaagagccaatcactccacctgttgaggttaaatataatcagcttctcattaatggacagtttgttgatgcagcctcagggaagacatttcctacatttgaccctcgaacaggcgaagctattactacggttgcggaggccgacactgaaaatgtcaaccgtgcagtctttgctgcccgtaaagcatttgatgaaggaccatggcctaaaatgacttgtgcagtaaccgaactttcttatctttccatatcctcttccttgtcccaacagtgagaggcggatttagaatttgaacttaacatgttcaacctttaaggttgggctgataaaattcatggtcttacagctcctgctgacagtttgcaccatgttcagaccctgcatgagccaattggtgttgcaggacagataataccctggaattttccgttattaatgttcgcctggaaagttggccctgcacttgcttgtggtaacactgtcgtactaaaaccagcagaacaaacaccactctctgccctgtatgtgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0014P22.2" temp_strand="-" temp_description="C02SLm0014P22.2  AC215471.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0014P22 sequenced_by:kribb upload_account_name:korea">
        <position start="5038" stop="1361"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4738" g_stop="4660" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="79" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="4659" i_stop="2978" i_length="1682">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.901" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="2977" g_stop="2837" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="80" r_stop="220" r_length="141" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="2836" i_stop="2758" i_length="79">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.750" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="2757" g_stop="2521" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="221" r_stop="457" r_length="237" r_score="0.996"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="2520" i_stop="1874" i_length="647">
            <donor d_prob="0.177" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="1873" g_stop="1661" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="458" r_stop="670" r_length="213" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0014P22.2" gen_strand="-" ref_id="SGN-U594105" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>670</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0014P22.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U594105" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4738" e_stop="4660"/>
          <exon e_start="2977" e_stop="2837"/>
          <exon e_start="2757" e_stop="2521"/>
          <exon e_start="1873" e_stop="1661"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTCTCTTTATGTAAACATTATGCTTTGTATGAAATAAAGGTCCTCTAAGATTTCTGTAAGCAACTTTGAAAATTTCTGTAAGTTCTTCTTTATTTAAATTCCGCAACTATGAAAATGGTAAGGAAAGAGTATGATTGTAGCTTCTCTTGTTCACTGATGACATGACAGTGTGAATAATTTTGATCAACTATGATTTAATCAGTTAAAAGTAATCTATTTATCTTATTTTTGAAATGACTAGTTTGGCTTTAGATGGTACTATAAAGTAGACCTCATTATTTTAGGTTACGCAGAGTGTTTACTTGATTGTCTAAACAAAATTTAGAAATAAATTTTGAACCTAAGCTAAACACAGAGTTAAAGGGTTTCATTTAATCATTAAATTTGTCCTCCGTTATAGTTCTTTTAAGGGAAAGCTCCGAATCAACCCATTTTATCCAAAAATGAAAAGATAAAACCACCCGCCCCTAATATAACCCGCATCCGACCAACTAACATGTAAAACCCACCCAAGTCCAAAGAAAGCAAAACTAACCCTTTAACGGCGGCGGCGGCGGCAGCGACGGCGCAACTTTTTTCCATGAGTTGATTTCCAAGAAAATGGAAATAACTTTGCCCGCATTGGATCTAACTAACAACTTATTGTTCTACCCAAGTCCAAGAAATCAAAAACAAACCCATATAATGGTAGCGTGGCGGCGGCGCGTCTTCTTCAATGGTTTCCAGGAGAAGGGGAAATAACTTTACCCACATCCGACCCAACTAACAAGTAAACCATCTTTCCCGTTATAGTTCTACCCAGGTCCAAGAAGGCAAATACAAACCCCTCTGGGCGTGGCAGCGGCGCATCTTCTTCCATGTCTTCCAAGAAAAGGGAAAATAACTTTGCCTTTTCCCATCTTCTACAGTTCCCTTAATTTTGCATTTTTTTAGAATCTAACTCAACAGTCCCTTTATGGACTTCATCACTTCTAACCAAACACAAATCCAACTAAGAAGAGATAAAACTCAATAAAATGAATAGCGTCCCAGAGGAAAATCTCAACACCTGAGTAGACATAAAAAAGAATCAACTTAGCAGTTAAATAAAATATCACATCATCAACAGCAGAAGTTGCCGCCTGAATCGCCACGAACCCAACCACAAAAGCAGAGACAAATTTCCCTTGCTGAAAGAATCAGCCCAAATCCACTACATTCTTGTACTGCAATTCCAATTACACTTGCCTCGAAATTGCCGCAAATACAGTAACTTGGTGACTTTTGAGGAAGATGGAAAAATTGATTCTTTTCTATTGGGTGGACAAACTCACCAAGAGTAATTAAAAATAAATATGGTCTGTTTTGAGGTTGAAGTTTAATTCAGGTGACATAGTACTTTGCTGGGTTTTGAGGAAACTGGAACAGTATTTGTTTTTTAATCATAATGTTGAGTTTATTTAATTTGGTTCGGATTTTAATTTGATGGGTTTGCGGTCGGATTCATTCTAACCAATAAAAGAATGTTGATGGTTATTTTATCTCCAATAACTATATTGCAAGTACTTGTAAACCAAAAATACATTCACAGATTATAATTAAAGTAGTCTTTTTCTAATCAGAAGAATTATTTTCACCCGTGTTTTCTTTCTTTGGTATCTTGATGATTGAACAAGCTAACTGTGTCTTGATATTACCCCACTTGATTTGTTTGATATTTTAACTGATTTTCTTGAGAAAGGAGCTAGCTAATTATAGGTTCTGCAATTTCAATCTACAGTTAGGTACTCCAACTACTGGAGAAAGGGTATCAGAAGGTTTTGTAGCAGTGCCGTGGTGCATGAAGAGCCAATCACTCCACCTGTTGAGGTTAAATATAATCAGCTTCTCATTAATGGACAGTTTGTTGATGCAGCCTCAGGTTGACCTAAAGTCTTTTCATTTATATGTTATTTCTTCTATAAATCTCAAGTGTAATATGGAGAATTCTACGTCTTCAGGGAAGACATTTCCTACATTTGACCCTCGAACAGGCGAAGCTATTACTACGGTTGCGGAGGCCGACACTGAAGATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAAGGACCATGGCCTAAAATGACTTGTGCAGTAACCGAACTTTCTTATCTTTCCATATCCTCTTCCTTGTCCCAACAGTGAGAGGCGGATTTAGAATTTGAACTTAACATGTTCAACCTTTAAGGTTCTTATCGCTGAACACATTGATCTATCGGACATACGTGTTTAGATTTTAATATTCTCTCATTTTAGTACTTTCACATATATATTTATTTCCTGTATTATATGGTCCCTCTACCGAAGTTAATTTCTCAGTTGGTCGTTCAACTAATAGTAATTATTTGAGTAATATAAGTCACTTTCTTTGTTGAAGAAAATTGGAATCAAGTTGAAAAATGACTTCTTGAGATAATAACTATTTAGCAAAGTGACCATATGAGAAATCAATCCGCCTCTGCAGACAACTACAGCTTGTTTAAACTCCCAGTCTTACTTAAGCATGTACAATAATGTACTTACTTAACCAAATATTTCCAGGAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGTTAAGAAAATAAGAAAAATGGCGTTATGTTTCCTTTTGACAGTTTAATAACCACTTATTGTATATCAATTGACGTTCTAATGTTTGCTGAATCACCCTAAATGCTTTTCTAAGTATTTCTGCTTACATTTCTTATTCAGGTTGGGCTGATAAAATTCATGGTCTTACAGCTCCTGCTGACAGTTTGCACCATGTTCAGACCCTGCATGAGCCAATTGGTGTTGCAGGACAGATAATACCCTGGAATTTTCCGTTATTAATGTTCGCCTGGAAAGTTGGCCCTGCACTTGCTTGTGGTAACACTGTCGTACTAAAACCAGCAGAACAAACACCACTCTCTGCCCTGTATGTGT</genome_strand>
        <mrna_strand>CTCTCTCTTTATGTAAACATTATGCTTTGTATGAAATAAAGGTCCTCTAAGATTTCTGTAAGCAACTTTGAAAATTTCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGGTACTCCAACTACTGGAGAAAGGGTATCAGAAGGTTTTGTAGCAGTGCCGTGGTGCATGAAGAGCCAATCACTCCACCTGTTGAGGTTAAATATAATCAGCTTCTCATTAATGGACAGTTTGTTGATGCAGCCTCAG...............................................................................GGAAGACATTTCCTACATTTGACCCTCGAACAGGCGAAGCTATTACTACGGTTGCGGAGGCCGACACTGAAAATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAAGGACCATGGCCTAAAATGACTTGTGCAGTAACCGAACTTTCTTATCTTTCCATATCCTCTTCCTTGTCCCAACAGTGAGAGGCGGATTTAGAATTTGAACTTAACATGTTCAACCTTTAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGGCTGATAAAATTCATGGTCTTACAGCTCCTGCTGACAGTTTGCACCATGTTCAGACCCTGCATGAGCCAATTGGTGTTGCAGGACAGATAATACCCTGGAATTTTCCGTTATTAATGTTCGCCTGGAAAGTTGGCCCTGCACTTGCTTGTGGTAACACTGTCGTACTAAAACCAGCAGAACAAACACCACTCTCTGCCCTGTATGTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U594107" ref_strand="+" ref_description="SGN-U594107 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|87247465|gb|ABD35815.1| (e_value=2e-45) putative; (*ATH) AT1G23800.1 (e_value=1e-43)  Symbol: None | aldehyde dehydrogenase, mitochondrial (ALDH3), nearly identical to mitochondrial aldehyde dehydrogenase ALDH3 (Arabidopsis thaliana) gi:19850249:gb:AAL99612; contains Pfam profile PF00171: aldehyde dehydrogenase (NAD) family protein |... ; (*SWP) sp|Q8S528|AL2B7_ARATH (e_value=9e-43) Aldehyde dehydrogenase family 2 member B7, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B7; ">
      <seq>gttaaatataatcagcttctcattaatggacagtttgttgatgcagcctcagggaagacatttcctacatttgaccctcgaacaggcgaagctattactacggttgcggaggccgacactgaagatgtcaaccgtgcagtctttgctgcccgtaaagcatttgatgaaggaccatggcctaaaatgacttgtgcagtaaccgaactttcttatctttccatatcctcttccttgtcccaacagtgagaggcggatttagaatttgaacttaacatgttcaacctttaaggaaaggtcatgtataatgttgcagtttgctgatttgcttgagaggcacagtgatgaacttgcagcacttgagacttgggataagggaaagccttacgaacaagctgcaaatgaagaaataccaatgctcattcgtcttttcagatactatgctggttaagaaaataagaaaaatggcgttatgtttccttttgacagtttaataaccacttattgtatatcaattgacgttctaatgtttgctgaatcaccctaaatgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0014P22.2" temp_strand="-" temp_description="C02SLm0014P22.2  AC215471.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0014P22 sequenced_by:kribb upload_account_name:korea">
        <position start="3188" stop="1608"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2888" g_stop="2837" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="52" r_length="52" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="2836" i_stop="2758" i_length="79">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.750" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="2757" g_stop="2521" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="53" r_stop="289" r_length="237" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="2520" i_stop="2168" i_length="353">
            <donor d_prob="0.177" d_score="1.00"/>
            <acceptor a_prob="0.922" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="2167" g_stop="1908" g_length="260"/>
          <reference_exon_boundary r_type="cDNA" r_start="290" r_stop="549" r_length="260" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0014P22.2" gen_strand="-" ref_id="SGN-U594107" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>549</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0014P22.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U594107" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2888" e_stop="2837"/>
          <exon e_start="2757" e_stop="2521"/>
          <exon e_start="2167" e_stop="1908"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTAAATATAATCAGCTTCTCATTAATGGACAGTTTGTTGATGCAGCCTCAGGTTGACCTAAAGTCTTTTCATTTATATGTTATTTCTTCTATAAATCTCAAGTGTAATATGGAGAATTCTACGTCTTCAGGGAAGACATTTCCTACATTTGACCCTCGAACAGGCGAAGCTATTACTACGGTTGCGGAGGCCGACACTGAAGATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAAGGACCATGGCCTAAAATGACTTGTGCAGTAACCGAACTTTCTTATCTTTCCATATCCTCTTCCTTGTCCCAACAGTGAGAGGCGGATTTAGAATTTGAACTTAACATGTTCAACCTTTAAGGTTCTTATCGCTGAACACATTGATCTATCGGACATACGTGTTTAGATTTTAATATTCTCTCATTTTAGTACTTTCACATATATATTTATTTCCTGTATTATATGGTCCCTCTACCGAAGTTAATTTCTCAGTTGGTCGTTCAACTAATAGTAATTATTTGAGTAATATAAGTCACTTTCTTTGTTGAAGAAAATTGGAATCAAGTTGAAAAATGACTTCTTGAGATAATAACTATTTAGCAAAGTGACCATATGAGAAATCAATCCGCCTCTGCAGACAACTACAGCTTGTTTAAACTCCCAGTCTTACTTAAGCATGTACAATAATGTACTTACTTAACCAAATATTTCCAGGAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGTTAAGAAAATAAGAAAAATGGCGTTATGTTTCCTTTTGACAGTTTAATAACCACTTATTGTATATCAATTGACGTTCTAATGTTTGCTGAATCACCCTAAATGCT</genome_strand>
        <mrna_strand>GTTAAATATAATCAGCTTCTCATTAATGGACAGTTTGTTGATGCAGCCTCAG...............................................................................GGAAGACATTTCCTACATTTGACCCTCGAACAGGCGAAGCTATTACTACGGTTGCGGAGGCCGACACTGAAGATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAAGGACCATGGCCTAAAATGACTTGTGCAGTAACCGAACTTTCTTATCTTTCCATATCCTCTTCCTTGTCCCAACAGTGAGAGGCGGATTTAGAATTTGAACTTAACATGTTCAACCTTTAAG.................................................................................................................................................................................................................................................................................................................................................................GAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGTTAAGAAAATAAGAAAAATGGCGTTATGTTTCCTTTTGACAGTTTAATAACCACTTATTGTATATCAATTGACGTTCTAATGTTTGCTGAATCACCCTAAATGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U584016" ref_strand="+" ref_description="SGN-U584016 Tomato 200607#2 [12 ESTs aligned] (*GB) gi|157345500|emb|CAO14798.1| (e_value=2e-29) unnamed; (*ATH) AT1G23800.1 (e_value=1e-27)  Symbol: None | aldehyde dehydrogenase, mitochondrial (ALDH3), nearly identical to mitochondrial aldehyde dehydrogenase ALDH3 (Arabidopsis thaliana) gi:19850249:gb:AAL99612; contains Pfam profile PF00171: aldehyde dehydrogenase (NAD) family protein |... ; (*SWP) sp|Q8S528|AL2B7_ARATH (e_value=1e-26) Aldehyde dehydrogenase family 2 member B7, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B7; ">
      <seq>tttactcattttgaatgctctctctttatgtaaacattatgctttgtatgaaataaaggtcctctaagatttctgtaagcaactttgaaaatttctttaggtactccaactactggagaaagggtatcagaaggttttgtagcagtgccgtggtgcatgaagagccaatcactccacctgttgaggttaaatataatcagcttctcattaatggacagtttgttgatgcagcctcagggaagacatttcctacatttgaccctcgaacaggcgaagctattactacggttgcggaggccgacactgaagatgtcaaccgtgcagtctttgctgcccgtaaagcatttgatgaaggaccatggcctaaaatgacttgtgcagtaaccgaactttcttatctttccatatcctcttccttgtcccaacagtgagaggcggatttagaatttgaacttaacatgttcaacctttaaggttcttatcgctgaacacattgatctatcggacatacgtgtttagattttaatattctctcattttagtactttcacatatatatttatttcctgtattatatggtccctctaccgaagttaatttctcagttggtcgttcaactaatagtaattatttgagtaatataagtcactttctttgttgaagaaaattggaatcaagttgaaaaatgacttcttgagataataactatttagcaaagtgaccatatgagaaatcaatccgcctctgcagacaactacagcttgtttaaactcccagtcttacttaagcatgtacaataatgtacttacttaaccaaatatttccaggaaaggtcatgtataatgttgcagtttgctgatttgcttgagaggcacagtgatgaacttgcagcacttgagacttgggataagggaaagccttacgaacaagctgcaaatgaagaaataccaatgctcattcgtcttttcagatactatgctggttaagaaaataagaaaaatggcgttatgtttccttttgacagtttaataaccacttattgtatatcaattgacgttctaatggtttgctgaatcacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0014P22.2" temp_strand="-" temp_description="C02SLm0014P22.2  AC215471.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0014P22 sequenced_by:kribb upload_account_name:korea">
        <position start="5048" stop="1617"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4755" g_stop="4660" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="96" r_length="96" r_score="0.938"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="4659" i_stop="2978" i_length="1682">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.901" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="2977" g_stop="2837" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="97" r_stop="237" r_length="141" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="2836" i_stop="2758" i_length="79">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.750" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="2757" g_stop="1917" g_length="841"/>
          <reference_exon_boundary r_type="cDNA" r_start="238" r_stop="1079" r_length="842" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0014P22.2" gen_strand="-" ref_id="SGN-U584016" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>1078</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0014P22.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U584016" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4755" e_stop="4660"/>
          <exon e_start="2977" e_stop="2837"/>
          <exon e_start="2757" e_stop="1917"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGAACAATTTTGAATGCTCTCTCTTTATGTAAACATTATGCTTTGTATGAAATAAAGGTCCTCTAAGATTTCTGTAAGCAACTTTGAAAATTTCTGTAAGTTCTTCTTTATTTAAATTCCGCAACTATGAAAATGGTAAGGAAAGAGTATGATTGTAGCTTCTCTTGTTCACTGATGACATGACAGTGTGAATAATTTTGATCAACTATGATTTAATCAGTTAAAAGTAATCTATTTATCTTATTTTTGAAATGACTAGTTTGGCTTTAGATGGTACTATAAAGTAGACCTCATTATTTTAGGTTACGCAGAGTGTTTACTTGATTGTCTAAACAAAATTTAGAAATAAATTTTGAACCTAAGCTAAACACAGAGTTAAAGGGTTTCATTTAATCATTAAATTTGTCCTCCGTTATAGTTCTTTTAAGGGAAAGCTCCGAATCAACCCATTTTATCCAAAAATGAAAAGATAAAACCACCCGCCCCTAATATAACCCGCATCCGACCAACTAACATGTAAAACCCACCCAAGTCCAAAGAAAGCAAAACTAACCCTTTAACGGCGGCGGCGGCGGCAGCGACGGCGCAACTTTTTTCCATGAGTTGATTTCCAAGAAAATGGAAATAACTTTGCCCGCATTGGATCTAACTAACAACTTATTGTTCTACCCAAGTCCAAGAAATCAAAAACAAACCCATATAATGGTAGCGTGGCGGCGGCGCGTCTTCTTCAATGGTTTCCAGGAGAAGGGGAAATAACTTTACCCACATCCGACCCAACTAACAAGTAAACCATCTTTCCCGTTATAGTTCTACCCAGGTCCAAGAAGGCAAATACAAACCCCTCTGGGCGTGGCAGCGGCGCATCTTCTTCCATGTCTTCCAAGAAAAGGGAAAATAACTTTGCCTTTTCCCATCTTCTACAGTTCCCTTAATTTTGCATTTTTTTAGAATCTAACTCAACAGTCCCTTTATGGACTTCATCACTTCTAACCAAACACAAATCCAACTAAGAAGAGATAAAACTCAATAAAATGAATAGCGTCCCAGAGGAAAATCTCAACACCTGAGTAGACATAAAAAAGAATCAACTTAGCAGTTAAATAAAATATCACATCATCAACAGCAGAAGTTGCCGCCTGAATCGCCACGAACCCAACCACAAAAGCAGAGACAAATTTCCCTTGCTGAAAGAATCAGCCCAAATCCACTACATTCTTGTACTGCAATTCCAATTACACTTGCCTCGAAATTGCCGCAAATACAGTAACTTGGTGACTTTTGAGGAAGATGGAAAAATTGATTCTTTTCTATTGGGTGGACAAACTCACCAAGAGTAATTAAAAATAAATATGGTCTGTTTTGAGGTTGAAGTTTAATTCAGGTGACATAGTACTTTGCTGGGTTTTGAGGAAACTGGAACAGTATTTGTTTTTTAATCATAATGTTGAGTTTATTTAATTTGGTTCGGATTTTAATTTGATGGGTTTGCGGTCGGATTCATTCTAACCAATAAAAGAATGTTGATGGTTATTTTATCTCCAATAACTATATTGCAAGTACTTGTAAACCAAAAATACATTCACAGATTATAATTAAAGTAGTCTTTTTCTAATCAGAAGAATTATTTTCACCCGTGTTTTCTTTCTTTGGTATCTTGATGATTGAACAAGCTAACTGTGTCTTGATATTACCCCACTTGATTTGTTTGATATTTTAACTGATTTTCTTGAGAAAGGAGCTAGCTAATTATAGGTTCTGCAATTTCAATCTACAGTTAGGTACTCCAACTACTGGAGAAAGGGTATCAGAAGGTTTTGTAGCAGTGCCGTGGTGCATGAAGAGCCAATCACTCCACCTGTTGAGGTTAAATATAATCAGCTTCTCATTAATGGACAGTTTGTTGATGCAGCCTCAGGTTGACCTAAAGTCTTTTCATTTATATGTTATTTCTTCTATAAATCTCAAGTGTAATATGGAGAATTCTACGTCTTCAGGGAAGACATTTCCTACATTTGACCCTCGAACAGGCGAAGCTATTACTACGGTTGCGGAGGCCGACACTGAAGATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAAGGACCATGGCCTAAAATGACTTGTGCAGTAACCGAACTTTCTTATCTTTCCATATCCTCTTCCTTGTCCCAACAGTGAGAGGCGGATTTAGAATTTGAACTTAACATGTTCAACCTTTAAGGTTCTTATCGCTGAACACATTGATCTATCGGACATACGTGTTTAGATTTTAATATTCTCTCATTTTAGTACTTTCACATATATATTTATTTCCTGTATTATATGGTCCCTCTACCGAAGTTAATTTCTCAGTTGGTCGTTCAACTAATAGTAATTATTTGAGTAATATAAGTCACTTTCTTTGTTGAAGAAAATTGGAATCAAGTTGAAAAATGACTTCTTGAGATAATAACTATTTAGCAAAGTGACCATATGAGAAATCAATCCGCCTCTGCAGACAACTACAGCTTGTTTAAACTCCCAGTCTTACTTAAGCATGTACAATAATGTACTTACTTAACCAAATATTTCCAGGAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGTTAAGAAAATAAGAAAAATGGCGTTATGTTTCCTTTTGACAGTTTAATAACCACTTATTGTATATCAATTGACGTTCTAAT-GTTTGCTGAATCACC</genome_strand>
        <mrna_strand>TTTACTCATTTTGAATGCTCTCTCTTTATGTAAACATTATGCTTTGTATGAAATAAAGGTCCTCTAAGATTTCTGTAAGCAACTTTGAAAATTTCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGGTACTCCAACTACTGGAGAAAGGGTATCAGAAGGTTTTGTAGCAGTGCCGTGGTGCATGAAGAGCCAATCACTCCACCTGTTGAGGTTAAATATAATCAGCTTCTCATTAATGGACAGTTTGTTGATGCAGCCTCAG...............................................................................GGAAGACATTTCCTACATTTGACCCTCGAACAGGCGAAGCTATTACTACGGTTGCGGAGGCCGACACTGAAGATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAAGGACCATGGCCTAAAATGACTTGTGCAGTAACCGAACTTTCTTATCTTTCCATATCCTCTTCCTTGTCCCAACAGTGAGAGGCGGATTTAGAATTTGAACTTAACATGTTCAACCTTTAAGGTTCTTATCGCTGAACACATTGATCTATCGGACATACGTGTTTAGATTTTAATATTCTCTCATTTTAGTACTTTCACATATATATTTATTTCCTGTATTATATGGTCCCTCTACCGAAGTTAATTTCTCAGTTGGTCGTTCAACTAATAGTAATTATTTGAGTAATATAAGTCACTTTCTTTGTTGAAGAAAATTGGAATCAAGTTGAAAAATGACTTCTTGAGATAATAACTATTTAGCAAAGTGACCATATGAGAAATCAATCCGCCTCTGCAGACAACTACAGCTTGTTTAAACTCCCAGTCTTACTTAAGCATGTACAATAATGTACTTACTTAACCAAATATTTCCAGGAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGTTAAGAAAATAAGAAAAATGGCGTTATGTTTCCTTTTGACAGTTTAATAACCACTTATTGTATATCAATTGACGTTCTAATGGTTTGCTGAATCACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U584020" ref_strand="+" ref_description="SGN-U584020 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|73647513|gb|AAZ79355.1| (e_value=5e-14) aldehyde; (*ATH) AT3G48000.1 (e_value=7e-19)  Symbol: None | aldehyde dehydrogenase (ALDH2), identical to aldehyde dehydrogenase (Arabidopsis thaliana) GI:8574427; similar to mitochondrial aldehyde dehydrogenase (Arabidopsis thaliana) gi:19850249:gb:AAL99612; identical to cDNA aldehyde dehydrog... ; (*SWP) sp|Q9SU63|AL2B4_ARATH (e_value=6e-18) Aldehyde dehydrogenase family 2 member B4, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B4; ">
      <seq>gcaacttttttccatgagttgatttccaagaaaatggaaataactttgcccgcattggatctaactaacaacttattgttctacccaagtccaagaaatcaaaaacaaacccatataatggtagcgtggcggcggcgcgtcttcttcaatggtttccaggagaaggggaaataactttacccacatccgacccaactaacaagtaaaccatctttcccgttatagttctacccaggtccaagaaggcaaatacaaacccctctgggcgtggcagcggcgcatcttcttccatgtcttccaagaaaagggaaaataactttgccttttcccatcttctacagttcccttaattttgcatttttttagaatctaactcaacagtccctttatggacttcatcacttctaaccaaacacaaatccaactaagaagagataaaactcaataaaatgaatagcgtcccagaggaaaatctcaacacctgagtagacataaaaaagaatcaacttagcagttaaataaaatatcacatcatcaacagcagaagttgccgcctgaatcgccacgaacccaaccacaaaagcagagacaaatttcccttgctgaaagaatcagcccaaatccactacattcttgtactgcaattccaattacacttgcctcgaaattgccgcaaatacagtaacttggtgacttttgaggaagatggaaaaattgattcttttctatttgggtggacaaactcaccaagagtaattaaaaataaatatggtctgttttgaggttgaagtttaattcagttaggtacctccaactactggagaaagggtatcagaaggttttgtagcagtgccgtggtgcatgaagagccaatcactccacctgttgaggttaaatataatcagcttctcattaatggacagttttgttgatgcagcctcagggaagacatttcctacatttgaccctcgaacaggcgaagctattactacggttgcggaggccgacactgaagatgtcaaccgtgcagtctttgctgcccgtaaagcatttgatgaatgacca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0014P22.2" temp_strand="-" temp_description="C02SLm0014P22.2  AC215471.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0014P22 sequenced_by:kribb upload_account_name:korea">
        <position start="4469" stop="2336"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4169" g_stop="3371" g_length="799"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="800" r_length="800" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="3370" i_stop="2978" i_length="393">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.901" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="2977" g_stop="2837" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="801" r_stop="943" r_length="143" r_score="0.972"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="2836" i_stop="2758" i_length="79">
            <donor d_prob="0.986" d_score="0.96"/>
            <acceptor a_prob="0.750" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="2757" g_stop="2636" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="944" r_stop="1065" r_length="122" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0014P22.2" gen_strand="-" ref_id="SGN-U584020" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>1062</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0014P22.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U584020" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4169" e_stop="3371"/>
          <exon e_start="2977" e_stop="2837"/>
          <exon e_start="2757" e_stop="2636"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAACTTTTTTCCATGAGTTGATTTCCAAGAAAATGGAAATAACTTTGCCCGCATTGGATCTAACTAACAACTTATTGTTCTACCCAAGTCCAAGAAATCAAAAACAAACCCATATAATGGTAGCGTGGCGGCGGCGCGTCTTCTTCAATGGTTTCCAGGAGAAGGGGAAATAACTTTACCCACATCCGACCCAACTAACAAGTAAACCATCTTTCCCGTTATAGTTCTACCCAGGTCCAAGAAGGCAAATACAAACCCCTCTGGGCGTGGCAGCGGCGCATCTTCTTCCATGTCTTCCAAGAAAAGGGAAAATAACTTTGCCTTTTCCCATCTTCTACAGTTCCCTTAATTTTGCATTTTTTTAGAATCTAACTCAACAGTCCCTTTATGGACTTCATCACTTCTAACCAAACACAAATCCAACTAAGAAGAGATAAAACTCAATAAAATGAATAGCGTCCCAGAGGAAAATCTCAACACCTGAGTAGACATAAAAAAGAATCAACTTAGCAGTTAAATAAAATATCACATCATCAACAGCAGAAGTTGCCGCCTGAATCGCCACGAACCCAACCACAAAAGCAGAGACAAATTTCCCTTGCTGAAAGAATCAGCCCAAATCCACTACATTCTTGTACTGCAATTCCAATTACACTTGCCTCGAAATTGCCGCAAATACAGTAACTTGGTGACTTTTGAGGAAGATGGAAAAATTGATTCTTTTCTA-TTGGGTGGACAAACTCACCAAGAGTAATTAAAAATAAATATGGTCTGTTTTGAGGTTGAAGTTTAATTCAGGTGACATAGTACTTTGCTGGGTTTTGAGGAAACTGGAACAGTATTTGTTTTTTAATCATAATGTTGAGTTTATTTAATTTGGTTCGGATTTTAATTTGATGGGTTTGCGGTCGGATTCATTCTAACCAATAAAAGAATGTTGATGGTTATTTTATCTCCAATAACTATATTGCAAGTACTTGTAAACCAAAAATACATTCACAGATTATAATTAAAGTAGTCTTTTTCTAATCAGAAGAATTATTTTCACCCGTGTTTTCTTTCTTTGGTATCTTGATGATTGAACAAGCTAACTGTGTCTTGATATTACCCCACTTGATTTGTTTGATATTTTAACTGATTTTCTTGAGAAAGGAGCTAGCTAATTATAGGTTCTGCAATTTCAATCTACAGTTAGGTA-CTCCAACTACTGGAGAAAGGGTATCAGAAGGTTTTGTAGCAGTGCCGTGGTGCATGAAGAGCCAATCACTCCACCTGTTGAGGTTAAATATAATCAGCTTCTCATTAATGGACAG-TTTGTTGATGCAGCCTCAGGTTGACCTAAAGTCTTTTCATTTATATGTTATTTCTTCTATAAATCTCAAGTGTAATATGGAGAATTCTACGTCTTCAGGGAAGACATTTCCTACATTTGACCCTCGAACAGGCGAAGCTATTACTACGGTTGCGGAGGCCGACACTGAAGATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAAGGACCA</genome_strand>
        <mrna_strand>GCAACTTTTTTCCATGAGTTGATTTCCAAGAAAATGGAAATAACTTTGCCCGCATTGGATCTAACTAACAACTTATTGTTCTACCCAAGTCCAAGAAATCAAAAACAAACCCATATAATGGTAGCGTGGCGGCGGCGCGTCTTCTTCAATGGTTTCCAGGAGAAGGGGAAATAACTTTACCCACATCCGACCCAACTAACAAGTAAACCATCTTTCCCGTTATAGTTCTACCCAGGTCCAAGAAGGCAAATACAAACCCCTCTGGGCGTGGCAGCGGCGCATCTTCTTCCATGTCTTCCAAGAAAAGGGAAAATAACTTTGCCTTTTCCCATCTTCTACAGTTCCCTTAATTTTGCATTTTTTTAGAATCTAACTCAACAGTCCCTTTATGGACTTCATCACTTCTAACCAAACACAAATCCAACTAAGAAGAGATAAAACTCAATAAAATGAATAGCGTCCCAGAGGAAAATCTCAACACCTGAGTAGACATAAAAAAGAATCAACTTAGCAGTTAAATAAAATATCACATCATCAACAGCAGAAGTTGCCGCCTGAATCGCCACGAACCCAACCACAAAAGCAGAGACAAATTTCCCTTGCTGAAAGAATCAGCCCAAATCCACTACATTCTTGTACTGCAATTCCAATTACACTTGCCTCGAAATTGCCGCAAATACAGTAACTTGGTGACTTTTGAGGAAGATGGAAAAATTGATTCTTTTCTATTTGGGTGGACAAACTCACCAAGAGTAATTAAAAATAAATATGGTCTGTTTTGAGGTTGAAGTTTAATTCAG.........................................................................................................................................................................................................................................................................................................................................................................................................TTAGGTACCTCCAACTACTGGAGAAAGGGTATCAGAAGGTTTTGTAGCAGTGCCGTGGTGCATGAAGAGCCAATCACTCCACCTGTTGAGGTTAAATATAATCAGCTTCTCATTAATGGACAGTTTTGTTGATGCAGCCTCAG...............................................................................GGAAGACATTTCCTACATTTGACCCTCGAACAGGCGAAGCTATTACTACGGTTGCGGAGGCCGACACTGAAGATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAATGACCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U594106" ref_strand="+" ref_description="SGN-U594106 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>gtgttcttttgaatgctctctctttatgtaaacattatgctttgtatgaaataaaggtcctctaagatttctgtaagcatactttgaaaatttctttaggtactccaactactggagaaacggtatcacaatgttttgtagcactgccgtggtgcatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0014P22.2" temp_strand="-" temp_description="C02SLm0014P22.2  AC215471.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0014P22 sequenced_by:kribb upload_account_name:korea">
        <position start="5047" stop="2614"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4753" g_stop="4660" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="95" r_length="95" r_score="0.926"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="4659" i_stop="2978" i_length="1682">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.901" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="2977" g_stop="2914" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="96" r_stop="159" r_length="64" r_score="0.938"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0014P22.2" gen_strand="-" ref_id="SGN-U594106" ref_strand="+">
        <total_alignment_score>0.930</total_alignment_score>
        <cumulative_length_of_scored_exons>158</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0014P22.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U594106" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4753" e_stop="4660"/>
          <exon e_start="2977" e_stop="2914"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAACAATTTTGAATGCTCTCTCTTTATGTAAACATTATGCTTTGTATGAAATAAAGGTCCTCTAAGATTTCTGTAAGCA-ACTTTGAAAATTTCTGTAAGTTCTTCTTTATTTAAATTCCGCAACTATGAAAATGGTAAGGAAAGAGTATGATTGTAGCTTCTCTTGTTCACTGATGACATGACAGTGTGAATAATTTTGATCAACTATGATTTAATCAGTTAAAAGTAATCTATTTATCTTATTTTTGAAATGACTAGTTTGGCTTTAGATGGTACTATAAAGTAGACCTCATTATTTTAGGTTACGCAGAGTGTTTACTTGATTGTCTAAACAAAATTTAGAAATAAATTTTGAACCTAAGCTAAACACAGAGTTAAAGGGTTTCATTTAATCATTAAATTTGTCCTCCGTTATAGTTCTTTTAAGGGAAAGCTCCGAATCAACCCATTTTATCCAAAAATGAAAAGATAAAACCACCCGCCCCTAATATAACCCGCATCCGACCAACTAACATGTAAAACCCACCCAAGTCCAAAGAAAGCAAAACTAACCCTTTAACGGCGGCGGCGGCGGCAGCGACGGCGCAACTTTTTTCCATGAGTTGATTTCCAAGAAAATGGAAATAACTTTGCCCGCATTGGATCTAACTAACAACTTATTGTTCTACCCAAGTCCAAGAAATCAAAAACAAACCCATATAATGGTAGCGTGGCGGCGGCGCGTCTTCTTCAATGGTTTCCAGGAGAAGGGGAAATAACTTTACCCACATCCGACCCAACTAACAAGTAAACCATCTTTCCCGTTATAGTTCTACCCAGGTCCAAGAAGGCAAATACAAACCCCTCTGGGCGTGGCAGCGGCGCATCTTCTTCCATGTCTTCCAAGAAAAGGGAAAATAACTTTGCCTTTTCCCATCTTCTACAGTTCCCTTAATTTTGCATTTTTTTAGAATCTAACTCAACAGTCCCTTTATGGACTTCATCACTTCTAACCAAACACAAATCCAACTAAGAAGAGATAAAACTCAATAAAATGAATAGCGTCCCAGAGGAAAATCTCAACACCTGAGTAGACATAAAAAAGAATCAACTTAGCAGTTAAATAAAATATCACATCATCAACAGCAGAAGTTGCCGCCTGAATCGCCACGAACCCAACCACAAAAGCAGAGACAAATTTCCCTTGCTGAAAGAATCAGCCCAAATCCACTACATTCTTGTACTGCAATTCCAATTACACTTGCCTCGAAATTGCCGCAAATACAGTAACTTGGTGACTTTTGAGGAAGATGGAAAAATTGATTCTTTTCTATTGGGTGGACAAACTCACCAAGAGTAATTAAAAATAAATATGGTCTGTTTTGAGGTTGAAGTTTAATTCAGGTGACATAGTACTTTGCTGGGTTTTGAGGAAACTGGAACAGTATTTGTTTTTTAATCATAATGTTGAGTTTATTTAATTTGGTTCGGATTTTAATTTGATGGGTTTGCGGTCGGATTCATTCTAACCAATAAAAGAATGTTGATGGTTATTTTATCTCCAATAACTATATTGCAAGTACTTGTAAACCAAAAATACATTCACAGATTATAATTAAAGTAGTCTTTTTCTAATCAGAAGAATTATTTTCACCCGTGTTTTCTTTCTTTGGTATCTTGATGATTGAACAAGCTAACTGTGTCTTGATATTACCCCACTTGATTTGTTTGATATTTTAACTGATTTTCTTGAGAAAGGAGCTAGCTAATTATAGGTTCTGCAATTTCAATCTACAGTTAGGTACTCCAACTACTGGAGAAAGGGTATCAGAAGGTTTTGTAGCAGTGCCGTGGTGCATGA</genome_strand>
        <mrna_strand>GTGTTCTTTTGAATGCTCTCTCTTTATGTAAACATTATGCTTTGTATGAAATAAAGGTCCTCTAAGATTTCTGTAAGCATACTTTGAAAATTTCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGGTACTCCAACTACTGGAGAAACGGTATCACAATGTTTTGTAGCACTGCCGTGGTGCATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U582910" ref_strand="+" ref_description="SGN-U582910 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|147781443|emb|CAN67221.1| (e_value=1e-12) hypothetical; (*ATH) AT5G14870.1 (e_value=2e-12) | Symbol: None | cyclic nucleotide-regulated ion channel, putative (CNGC18), similar to cyclic nucleotide and calmodulin-regulated ion channel (cngc6) GI:4581207 from (Arabidopsis thaliana) | chr5:4808094-4810900 REVERSE | Aliases: T9L3.170, T9L3_170; (*SWP) sp|Q9LEQ3|CNG18_ARATH (e_value=1e-11) Putative cyclic nucleotide-gated ion channel 18 OS=Arabidopsis thaliana GN=CNGC18; ">
      <seq>agtgtcatcagtgaacaagagaagctacaatcatattctttccttaccttccctttttatattgttattctaaatagtttatcaataacttcataaaattaatacataaattatataaaaaaaattctattatactcatgatagttaattacttcgaaaatagatatttgatcaacttaagaaaattagtaattaattttcatattataattttgaaaaggaatctctaacaaacaaattaaaaataaaagatgatttacctatcatttttttgaaaaattaactttaatgaaagtgaaatccaaaccaggtgagagatataaaaaaaaaaaaaggaaaagagagagtacctaaattaagatgccagtccattcttttgcacataaacagtagtaaagaccgtagtataaataccttgaagtgcgaagctgagaaatgatccgtcgtgtatgagtattcattgctggagaccgagaaaattaaatagagatggagaagaagagataagaatcggagcaacgtcaagaattcagataccagagtaatttttggaccagagaccagatttgctgctgctaaaaatgcagagaaaaatcaggctcatctggcttaaacagcttgggcatttttaagctagaagaagaatcagccatcttctgttctattcctcttctcgtattagtagcaaatcgtttggccaaaattgtagctccaagttgttgggaaccacgagaaccactggctactaacggttgctcaggaccagcgtcatcaaaactttgctcattgtagttaccctcatcattaggatcttgattataataatagctctctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0014P22.2" temp_strand="+" temp_description="C02SLm0014P22.2  AC215471.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0014P22 sequenced_by:kribb upload_account_name:korea">
        <position start="7521" stop="9402"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7821" g_stop="8400" g_length="580"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="589" r_length="589" r_score="0.969"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="8401" i_stop="8856" i_length="456">
            <donor d_prob="0.967" d_score="0.92"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="8857" g_stop="9102" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="590" r_stop="835" r_length="246" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0014P22.2" gen_strand="+" ref_id="SGN-U582910" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>826</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0014P22.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U582910" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7821" e_stop="8400"/>
          <exon e_start="8857" e_stop="9102"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTGTCATCAGTGAACAAGAGAAGCTACAATCATATTCTTTCCTTACCTTCCCTTTTTATATTGTTATTCTAAATAGTTTATCAATAACTTCATAAAATTAATACATAAATTATATAAAAAAAATTCTATTATACTCATGATAGTTAATTACTTCGAAAATAGATATTTGATCAACTTAAGAAAATTAGTAATTAATTTTCATATTATAATTTTGAAAAGGAATCTCTAACAAACAAATTAAAAATAAAAGATGATTTACCTATCATTTTTTTGAAAAATTAACTTTAATGAAAGTGAAATCCAAA-CAGGTGAGAGATATAAAAAAAAAAAAAGGAAAAGAGAGAGTA-CTAAATTAAGATG-CAGTCCATTCTTTTGCACATAAACAGTAGTAAAGA-CGTAGTATAAATA-CTTGAAGTGCGAAGCTGAGAAATGATCCGTCGTGTATGAGTATTCATTGCTGGAGA-CGAGAAAATTAAATAGAGATGGAGAAGAAGAGATAAGAATCGGAGCAACGTCAAGAATTCAGATA-CAGAGTAATTTTTGGA-CAGAGA-CAGATTTGCTGCTGCTAAAAATGCAGAGGTAGTCTAACTACTTGCACGTCATCAATTAGCTGATTCATTAGATATAAGCTTATCCCTTTTCTTCTCTGTGTTCCATTCCACTATTCCTTTCCTGAACCCTATGAAAAAAATATTGCCTTCTTTTTTTTCTGTCCAATCAAAAACAATCTAATATGTACAGGTAAAACTTACCCACAATATGTTTGGCGTAAACATCCGGTACGGGTAAGTTTTTTCCAATATTACCTTTGGAACTAGATAACTTTTAGGCACAATCAACTAGAAAAGAAGGTTGTATTTCACATGATTGAAAAGGGAATAATGTTGTAATCAAAAAGGCCTATAGTTCCTGAAATTTACAAAAAAGTTTTAAAAAAAAGGGTACTAGCTTTGTCATTACTCACCAGTCACCAGTACCTTTCAGTAATGCAAGGTGTTCTAACTAATTACATATGATGTGGCCTTCATTCTGCAGAAAAATCAGGCTCATCTGGCTTAAACAGCTTGGGCATTTTTAAGCTAGAAGAAGAATCAGCCATCTTCTGTTCTATTCCTCTTCTCGTATTAGTAGCAAATCGTTTGGCCAAAATTGTAGCTCCAAGTTGTTGGGAACCACGAGAACCACTGGCTACTAACGGTTGCTCAGGACCAGCGTCATCAAAACTTTGCTCATTGTAGTTACCCTCATCATTAGGATCTTGATTATAATAATAGCTCTCTT</genome_strand>
        <mrna_strand>AGTGTCATCAGTGAACAAGAGAAGCTACAATCATATTCTTTCCTTACCTTCCCTTTTTATATTGTTATTCTAAATAGTTTATCAATAACTTCATAAAATTAATACATAAATTATATAAAAAAAATTCTATTATACTCATGATAGTTAATTACTTCGAAAATAGATATTTGATCAACTTAAGAAAATTAGTAATTAATTTTCATATTATAATTTTGAAAAGGAATCTCTAACAAACAAATTAAAAATAAAAGATGATTTACCTATCATTTTTTTGAAAAATTAACTTTAATGAAAGTGAAATCCAAACCAGGTGAGAGATATAAAAAAAAAAAAAGGAAAAGAGAGAGTACCTAAATTAAGATGCCAGTCCATTCTTTTGCACATAAACAGTAGTAAAGACCGTAGTATAAATACCTTGAAGTGCGAAGCTGAGAAATGATCCGTCGTGTATGAGTATTCATTGCTGGAGACCGAGAAAATTAAATAGAGATGGAGAAGAAGAGATAAGAATCGGAGCAACGTCAAGAATTCAGATACCAGAGTAATTTTTGGACCAGAGACCAGATTTGCTGCTGCTAAAAATGCAGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAATCAGGCTCATCTGGCTTAAACAGCTTGGGCATTTTTAAGCTAGAAGAAGAATCAGCCATCTTCTGTTCTATTCCTCTTCTCGTATTAGTAGCAAATCGTTTGGCCAAAATTGTAGCTCCAAGTTGTTGGGAACCACGAGAACCACTGGCTACTAACGGTTGCTCAGGACCAGCGTCATCAAAACTTTGCTCATTGTAGTTACCCTCATCATTAGGATCTTGATTATAATAATAGCTCTCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U582911" ref_strand="+" ref_description="SGN-U582911 Tomato 200607#2 [6 ESTs aligned] (*GB) gi|157342248|emb|CAO64361.1| (e_value=3e-92) unnamed; (*ATH) AT5G14870.1 (e_value=1e-89) | Symbol: None | cyclic nucleotide-regulated ion channel, putative (CNGC18), similar to cyclic nucleotide and calmodulin-regulated ion channel (cngc6) GI:4581207 from (Arabidopsis thaliana) | chr5:4808094-4810900 REVERSE | Aliases: T9L3.170, T9L3_170; (*SWP) sp|Q9LEQ3|CNG18_ARATH (e_value=9e-89) Putative cyclic nucleotide-gated ion channel 18 OS=Arabidopsis thaliana GN=CNGC18; ">
      <seq>gaaaaaaaaaaaggataagagagagtactaaattaagatgcggtgcattctttggcacataaacggcagtaaagacgtggtctaaatacttgaagtgcgaagctgagaaatgatccgtcgagtatgagtattcattgctggagacgagaaaattaaatagagatggagaagaagagatgagaattggagcagcgtcaagaattcatatacagagtaatttttggacagagacagatttgctgctgctaaaaatgcagagaaaaatcaggctcatctggcttaaacagcttgggcatttttaagctagaagaagaatcagccatcttctgttctattcctcgtctcgtattagtagcaaatcgtttggccaaaattgtagctccaagttgttgggaaccacgagaaccactggctactaacggttgctcaggaccagcgtcatcaaaactttgctcattgtagttaccctcatcattaggatcttgattataataatagctctcttgtagagccaactcgtgttccatctttttcttcttataccttctccatgcagcctctataaaacaagcaccccatgttctccactgatgagaatagtacctaaatgcatgctgtagcttcatgctgtgaagacgtttaaattgaactgcaaaaaatttcaggtcttcagctcgaagtgcaaatgcttcaacttcagtaagtgttctcactgttcgagttgaagctggcaactgcgttgagttaggcagtaaggcccaagtcagcaattcttcaccacaaaaatcattaggtccaagggtgattgaattgaagaatccagatcttcccccatttgtcgtggagctctctagttgtcccctgatgataaagagcatctcactcactggatcatcttctagaacaacatatgtgcccattatgctcagggtcgacactaggcgttcacatattgcatcaagcaactggtcatccatttgctcaaaaaatggaacctgcgcagtcaggagattttggggtctctaaagcttagcaaacaaaagtggatgggtttaggcatttacagagtaaaaatacaactccaaacatgtggctgatgcaaatacaaaacgtaaggtacatcacaagacaagtcaaagcttaaattgatgactgaagagatggaactattttatttattcattcactaatacttattagtacttatttcttttgctcaaatctttaactactggcaaatatttctgcctgcagctcttttccttaatggttgcctccctgaagtatttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0014P22.2" temp_strand="+" temp_description="C02SLm0014P22.2  AC215471.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0014P22 sequenced_by:kribb upload_account_name:korea">
        <position start="7843" stop="10187"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8142" g_stop="8400" g_length="259"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="259" r_length="259" r_score="0.946"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="8401" i_stop="8856" i_length="456">
            <donor d_prob="0.967" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="8857" g_stop="9887" g_length="1031"/>
          <reference_exon_boundary r_type="cDNA" r_start="260" r_stop="1290" r_length="1031" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0014P22.2" gen_strand="+" ref_id="SGN-U582911" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>1290</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0014P22.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U582911" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8142" e_stop="8400"/>
          <exon e_start="8857" e_stop="9887"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAAAAAAAAGGAAAAGAGAGAGTACTAAATTAAGATGCAGTCCATTCTTTTGCACATAAACAGTAGTAAAGACGTAGTATAAATACTTGAAGTGCGAAGCTGAGAAATGATCCGTCGTGTATGAGTATTCATTGCTGGAGACGAGAAAATTAAATAGAGATGGAGAAGAAGAGATAAGAATCGGAGCAACGTCAAGAATTCAGATACAGAGTAATTTTTGGACAGAGACAGATTTGCTGCTGCTAAAAATGCAGAGGTAGTCTAACTACTTGCACGTCATCAATTAGCTGATTCATTAGATATAAGCTTATCCCTTTTCTTCTCTGTGTTCCATTCCACTATTCCTTTCCTGAACCCTATGAAAAAAATATTGCCTTCTTTTTTTTCTGTCCAATCAAAAACAATCTAATATGTACAGGTAAAACTTACCCACAATATGTTTGGCGTAAACATCCGGTACGGGTAAGTTTTTTCCAATATTACCTTTGGAACTAGATAACTTTTAGGCACAATCAACTAGAAAAGAAGGTTGTATTTCACATGATTGAAAAGGGAATAATGTTGTAATCAAAAAGGCCTATAGTTCCTGAAATTTACAAAAAAGTTTTAAAAAAAAGGGTACTAGCTTTGTCATTACTCACCAGTCACCAGTACCTTTCAGTAATGCAAGGTGTTCTAACTAATTACATATGATGTGGCCTTCATTCTGCAGAAAAATCAGGCTCATCTGGCTTAAACAGCTTGGGCATTTTTAAGCTAGAAGAAGAATCAGCCATCTTCTGTTCTATTCCTCTTCTCGTATTAGTAGCAAATCGTTTGGCCAAAATTGTAGCTCCAAGTTGTTGGGAACCACGAGAACCACTGGCTACTAACGGTTGCTCAGGACCAGCGTCATCAAAACTTTGCTCATTGTAGTTACCCTCATCATTAGGATCTTGATTATAATAATAGCTCTCTTGTAGAGCCAACTCGTATTCCATCTTTTTCTTCTTATACCTTCTCCATGCAGCCTGTATAAAACAAGCACCCCATGTTCTCCACTGATGAGAATAGTACCTAAATGCATGCTGTAGCTTCATGCTGTGAAGACGTTTAAATTGAACTGCAAAAAATTTCAGGTCTTCAGCTCGAAGTGCAAATGCTTCAACTTCAGTAAGTGTTCTCACTGTTCGAGTTGAAGCTGGCAACTGCGTTGAGTTAGGCAGTAAGGCCCAAGTCAGCAATTCTTCACCACAAAAATCATTAGGTCCAAGGGTGATTGAATTGAAGAATCCAGATCTTCCCCCATTTGTCGTGGAGCTCTCTAGTTGTCCCCTGATGATAAAGAGCATCTCACTCACTGGATCATCTTCTAGAACAACATATGTGCCCATTATGCTCAGGGTCGACACTAGGCGTTCACATATTGCATCAAGCAACTGGTCATCCATTTGCTCAAAAAATGGAACCTGCGCAGTCAGGAGATTTTGGGGTCTCTAAAGCTTAGCAAACAAAAGTGGATGGGTTTAGGCATTTACAGAGTAAAAATACAACTCCAAACATGTGGCTGATGCAAATACAAAACGTAAGGTACATCACAAGACAAGTCAAAGCTTAAATTGATGACTGAAGAGATGGAACTATTTTATTTATTCATTCACTAATACTTATTAGTACTTATTTCTTTTGCTCAAATCTTTAACTACTGGCAAATATTTCTGCCTGCAGCTCTTTTCCTTAATGTTTGCCTCCTGAAAGTATTTC</genome_strand>
        <mrna_strand>GAAAAAAAAAAAGGATAAGAGAGAGTACTAAATTAAGATGCGGTGCATTCTTTGGCACATAAACGGCAGTAAAGACGTGGTCTAAATACTTGAAGTGCGAAGCTGAGAAATGATCCGTCGAGTATGAGTATTCATTGCTGGAGACGAGAAAATTAAATAGAGATGGAGAAGAAGAGATGAGAATTGGAGCAGCGTCAAGAATTCATATACAGAGTAATTTTTGGACAGAGACAGATTTGCTGCTGCTAAAAATGCAGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAATCAGGCTCATCTGGCTTAAACAGCTTGGGCATTTTTAAGCTAGAAGAAGAATCAGCCATCTTCTGTTCTATTCCTCGTCTCGTATTAGTAGCAAATCGTTTGGCCAAAATTGTAGCTCCAAGTTGTTGGGAACCACGAGAACCACTGGCTACTAACGGTTGCTCAGGACCAGCGTCATCAAAACTTTGCTCATTGTAGTTACCCTCATCATTAGGATCTTGATTATAATAATAGCTCTCTTGTAGAGCCAACTCGTGTTCCATCTTTTTCTTCTTATACCTTCTCCATGCAGCCTCTATAAAACAAGCACCCCATGTTCTCCACTGATGAGAATAGTACCTAAATGCATGCTGTAGCTTCATGCTGTGAAGACGTTTAAATTGAACTGCAAAAAATTTCAGGTCTTCAGCTCGAAGTGCAAATGCTTCAACTTCAGTAAGTGTTCTCACTGTTCGAGTTGAAGCTGGCAACTGCGTTGAGTTAGGCAGTAAGGCCCAAGTCAGCAATTCTTCACCACAAAAATCATTAGGTCCAAGGGTGATTGAATTGAAGAATCCAGATCTTCCCCCATTTGTCGTGGAGCTCTCTAGTTGTCCCCTGATGATAAAGAGCATCTCACTCACTGGATCATCTTCTAGAACAACATATGTGCCCATTATGCTCAGGGTCGACACTAGGCGTTCACATATTGCATCAAGCAACTGGTCATCCATTTGCTCAAAAAATGGAACCTGCGCAGTCAGGAGATTTTGGGGTCTCTAAAGCTTAGCAAACAAAAGTGGATGGGTTTAGGCATTTACAGAGTAAAAATACAACTCCAAACATGTGGCTGATGCAAATACAAAACGTAAGGTACATCACAAGACAAGTCAAAGCTTAAATTGATGACTGAAGAGATGGAACTATTTTATTTATTCATTCACTAATACTTATTAGTACTTATTTCTTTTGCTCAAATCTTTAACTACTGGCAAATATTTCTGCCTGCAGCTCTTTTCCTTAATGGTTGCCTCCCTGAAGTATTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U566785" ref_strand="+" ref_description="SGN-U566785 Tomato 200607#2 [11 ESTs aligned] (*GB) gi|15241516|ref|NP_196991.1| (e_value=3e-58) cyclic nucleotide-regulated ion channel, putative (CNGC18) [Arabidopsis thaliana]; (*ATH) AT5G14870.1 (e_value=2e-60) | Symbol: None | cyclic nucleotide-regulated ion channel, putative (CNGC18), similar to cyclic nucleotide and calmodulin-regulated ion channel (cngc6) GI:4581207 from (Arabidopsis thaliana) | chr5:4808094-4810900 REVERSE | Aliases: T9L3.170, T9L3_170; (*SWP) sp|Q9LEQ3|CNG18_ARATH (e_value=2e-59) Putative cyclic nucleotide-gated ion channel 18 OS=Arabidopsis thaliana GN=CNGC18; ">
      <seq>acaattttcaatggcagtaaaggaagctttgatgaaaaaaggagcttcaatggaacactcttaattcattcttccttcttttctagcgctaattttcactcactgtttcattcataatacaaaaaaattattggaatctgttgtgttttccagaagagagacaatcttccggaatccgattttgatatcggactccgccatggaagatgactagaatatttgcaaagccggcgtctcacctccgtcatttacagcaatctttgaagaacaaatcattttcgaacgatgtgccatggtggcgccaaattctcgatccaaacagcgatatcgtcaatcgctggaactatgtcttcctccttacctgtctcatctctcttttcatcgatccactctacttctacgtacctttcgtcagcgatagagcttgtatgtccactgatgacgaagccgcccgtgaaattaccatctatcgttctctcaccgacatcttttacttccttcacattgccatgaagttccgcacagcttttgttgctcctagctctagggttttcggccggggtgagcttgttatggatccccgtgaaattgctatacgatatctcaaaactgatttcatcgttgattttacagctgctcttcccctgcctcaaattgttattcgctatgtaatcccagcagcaaaaagaaatggttcgggtcattccaaaagtacacttgcacttatcgttctcatacaatatgtgccaaggttattcgttattttcccattaaatcagcagattatcaaaact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0014P22.2" temp_strand="-" temp_description="C02SLm0014P22.2  AC215471.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0014P22 sequenced_by:kribb upload_account_name:korea">
        <position start="13713" stop="12248"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13413" g_stop="12761" g_length="653"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="653" r_length="653" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="12760" i_stop="12689" i_length="72">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12688" g_stop="12548" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="654" r_stop="794" r_length="141" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0014P22.2" gen_strand="-" ref_id="SGN-U566785" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>794</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0014P22.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U566785" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13413" e_stop="12761"/>
          <exon e_start="12688" e_stop="12548"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAATTTTCAATGGCAGTAAAGGAAGCTTTGATGAAAAAAGGAGCTTCAATGGAACACTCTTAATTCATTCTTCCTTCTTTTCTAGCGCTAATTTTCACTCACTGTTTCATTCATAATACAAAAAAATTATTGGAATCTGTTGTGTTTTCCAGAAGAGAGACAATCTTCCGGAATCCGATTTTGATATCGGACTCCGCCATGGAAGATGACTAGAATATTTGCAAAGCCGGCGTCTCACCTCCGTCATTTACAGCAATCTTTGAAGAACAAATCATTTTCGAACGATGTGCCATGGTGGCGCCAAATTCTCGATCCAAACAGCGATATCGTCAATCGCTGGAACTATGTCTTCCTCCTTACCTGTCTCATCTCTCTTTTCATCGATCCACTCTACTTCTACGTACCTTTCGTCAGCGATAGAGCTTGTATGTCCACTGATGACGAAGCCGCCCGTGAAATTACCATCTATCGTTCTCTCACCGACATCTTTTACTTCCTTCACATTGCCATGAAGTTCCGCACAGCTTTTGTTGCTCCTAGCTCTAGGGTTTTCGGCCGGGGTGAGCTTGTTATGGATCCCCGTGAAATTGCTATACGATATCTCAAAACTGATTTCATCGTTGATTTTACAGCTGCTCTTCCCCTGCCTCAAGTCAGTACATATCCATTTAGTTTAATACTCTACTTTTATTATTGTTATTTTTAATTAATAGTGCCATTGCAGATTGTTATTCGCTATGTAATCCCAGCAGCCAAAAGAAATGGTTCGGGTCATTCCAAAAGTACACTTGCACTTATCGTTCTCATACAATATGTGCCAAGGTTATTCGTTATTTTCCCATTAAATCAGCAGATTATCAAAACT</genome_strand>
        <mrna_strand>ACAATTTTCAATGGCAGTAAAGGAAGCTTTGATGAAAAAAGGAGCTTCAATGGAACACTCTTAATTCATTCTTCCTTCTTTTCTAGCGCTAATTTTCACTCACTGTTTCATTCATAATACAAAAAAATTATTGGAATCTGTTGTGTTTTCCAGAAGAGAGACAATCTTCCGGAATCCGATTTTGATATCGGACTCCGCCATGGAAGATGACTAGAATATTTGCAAAGCCGGCGTCTCACCTCCGTCATTTACAGCAATCTTTGAAGAACAAATCATTTTCGAACGATGTGCCATGGTGGCGCCAAATTCTCGATCCAAACAGCGATATCGTCAATCGCTGGAACTATGTCTTCCTCCTTACCTGTCTCATCTCTCTTTTCATCGATCCACTCTACTTCTACGTACCTTTCGTCAGCGATAGAGCTTGTATGTCCACTGATGACGAAGCCGCCCGTGAAATTACCATCTATCGTTCTCTCACCGACATCTTTTACTTCCTTCACATTGCCATGAAGTTCCGCACAGCTTTTGTTGCTCCTAGCTCTAGGGTTTTCGGCCGGGGTGAGCTTGTTATGGATCCCCGTGAAATTGCTATACGATATCTCAAAACTGATTTCATCGTTGATTTTACAGCTGCTCTTCCCCTGCCTCAA........................................................................ATTGTTATTCGCTATGTAATCCCAGCAGCAAAAAGAAATGGTTCGGGTCATTCCAAAAGTACACTTGCACTTATCGTTCTCATACAATATGTGCCAAGGTTATTCGTTATTTTCCCATTAAATCAGCAGATTATCAAAACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U567595" ref_strand="+" ref_description="SGN-U567595 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|157345523|emb|CAO14821.1| (e_value=8e-35) unnamed; (*ATH) AT3G01410.1 (e_value=9e-36) | Symbol: None | RNase H domain-containing protein, low similarity to GAG-POL precursor (Oryza sativa (japonica cultivar-group)) GI:5902445; contains Pfam profile: PF00075 RNase H | chr3:153446-155606 REVERSE | Aliases: T13O15.5, T13O15_5; ">
      <seq>taatcagcccaattgatgtttccggcaaaacagcccaaatatgcagtttcggatcaaaattagctgaaatattacacgacttcccaaaatgaaacttgagagatcagctactgacaaagacaaaactccattaaaactccctttcttcaccttccaaccaactacacccttcactctcctcttccgctcgtgctggagttacttgcaaagtcaagtcgaaacgttggagttggaaacataaaatgggggacgagaaggatgcgttctatgtcgtgcgcaaaggggatgtgatcggggtttataagaacttgagcgatttgcaagctttgctacgaacatctattggtgaaccagccataagcgtttttaaagggtatcgcttgactaaggaatctgaagagtatctggcctctcatggactcaagaatgcaatgtattctatggatttcagtgatgttcgagacgatctctttgggactctcatcccatgcccatttcggcaacccggctcttcaaaagataanattgtggggaagaatgttcaggaaaagaggatgcanatggagttggtggcatctccttcatttgcagctgctggtcagcaaaaacttgctaaattggacaatttcctagaagctcccccaatttcgtcatatncntnctccctacntgcagngntcatgcatccttgantttganggggcttcnaaggggaatcctggnctagctggtgctggggctgtgctgcgtgctgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0014P22.2" temp_strand="+" temp_description="C02SLm0014P22.2  AC215471.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0014P22 sequenced_by:kribb upload_account_name:korea">
        <position start="15130" stop="19981"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15430" g_stop="15619" g_length="190"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="190" r_length="190" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15620" i_stop="15855" i_length="236">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15856" g_stop="16006" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="191" r_stop="341" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="16007" i_stop="16299" i_length="293">
            <donor d_prob="0.951" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="16300" g_stop="16458" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="342" r_stop="500" r_length="159" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="16459" i_stop="18243" i_length="1785">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18244" g_stop="18303" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="501" r_stop="560" r_length="60" r_score="0.967"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="18304" i_stop="18652" i_length="349">
            <donor d_prob="0.835" d_score="0.96"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="18653" g_stop="18751" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="561" r_stop="660" r_length="100" r_score="0.970"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="18752" i_stop="19586" i_length="835">
            <donor d_prob="0.992" d_score="0.94"/>
            <acceptor a_prob="0.000" a_score="0.86"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="19587" g_stop="19681" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="661" r_stop="755" r_length="95" r_score="0.916"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0014P22.2" gen_strand="+" ref_id="SGN-U567595" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>754</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0014P22.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U567595" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15430" e_stop="15619"/>
          <exon e_start="15856" e_stop="16006"/>
          <exon e_start="16300" e_stop="16458"/>
          <exon e_start="18244" e_stop="18303"/>
          <exon e_start="18653" e_stop="18751"/>
          <exon e_start="19587" e_stop="19681"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAATCAGCCCAATTGATGTTTCCGGCAAAACAGCCCAAATATGCAGTTTCGGATCAAAATTAGCTGAAATATTACACGACTTCCCAAAATGAAACTTGAGAGATCAGCTACTGACAAAGACAAAACTCCATTAAAACTCCCTTTCTTCACCTTCCAACCAACTACACCCTTCACTCTCCTCTTCCGCTCGGTAAGAAGTTTCCTTCTTTTCACTTTTCTCTGTTTTCGAATAAATCCTAATTCCATATATCTGTCGGAATTCGGGTCTATTTGAAAAAAAGTGTGAAGAAAATGCCCTAAATCATATAGTAATAATACGTAGACCGTACATTGTTCTCTGAGTCTTCAAATCGTTGAGGAAATTGGGCACTTGTAGTTGTTGTTTCGTTTCGTCTTTTGCTAAAACTTATGATTGTGTTGATACAGTGCTGGAGTTACTTGCAAAGTCAAGTCGAAACGTTGGAGTTGGAAACATAAAATGGGGGACGAGAAGGATGCGTTCTATGTCGTGCGCAAAGGGGATGTGATCGGGGTTTATAAGAACTTGAGCGATTTGCAAGCTTTGCTACGAACATCTGTATGTTTCTTTTACCTTTTAAGGTTTAAATACTTTTCTGCTTTTGGGCCAAAGACAGTTTCCTTTATAGTCATTGTATCTATTGTACTGCTACTTTTTTTTTTTTTGGTCTTTTATAGCTCTAGTATAGGAAGAGTTCAATTATTCCAGCTTTTGAACAATGATGAAGAAATAGTTGGATACATTATAGCCAATCCCATTAGTGTAGTGTTGATTGATTAATTAGACCAAAAGTAATAATACTATCAGATGTTTCTTTTTTTAAATGTATTATTTTAATTCTAATCTTTCAGATTGGTGAACCAGCCATAAGCGTTTTTAAAGGGTATCGCTTGACTAAGGAATCTGAAGAGTATCTGGCCTCTCATGGACTCAAGAATGCAATGTATTCTATGGATTTCAGTGATGTTCGAGACGATCTCTTTGGGACTCTCATCCCATGCCCATTTCGGGTTAGAAAGTTAATCATTCTGCTGTTTTTGAATTGGCATTAGATGCAGTTGTCTTATCTATTTGGTAGTAATGTCAATTTGATGATAGTTGGGTCAAATTTTGGCTATTTTCCGGCTTTGAAAGATATATATAAATCCTTCATGATTTGGACTATAGTACTGCGCCACTAGCTTGACTGACTGCGTGAATTTCTCGGTCAGGCTGATCTCCCCCCCTCCCCTCCCTTTTTTTTTTAGAATGTTAGGCCAGTGTTTTAGACGGCGATAGGCGATAAAAGGCGACAAGGGTCTGCCTCGCCACAAGGCGAGGCGAACGGCGAGGCGCTCGCCTTTTTGAAGTGCGGCACCTTTTAATACCAAAATATTTAAAATTTTAATTGCATATGTAAATAATCAAACAATAACATATTAGCAATTTTTTCAAATTAAAAACTAAAAATAGATAGTACGTACTAAAAGCCTAGAACATGAAAGAGAAAAAAAAGAACAAAAGTCAAAACAAAGGTAAAAGTGACCAACTCTGAAGAAGAAAACAAGAAATATGTATTGGTTAGACTTTGGAGTCGCCGGAAAAGCCTGGCAAGTTACCGGAGGAGTCTAGTCGAAAATCCTAAAATTACCTTTTAATTTTTAAAAAATCCTAAATTTGTCGCCTTTTTTTTTAAAAAAAAACACAAAAGGCGACACCTTCCTAGCCTTTCTCGCCTCTAGCCTTTTGTCGACATGACGTCGCCTTTTGAAGATTGCCTCGCCACAAAGCTAAAAGGCAATGAAGGGTCGCCTCGCCTCGCCTCGCCTCTTGCCATTGGCGACGAGGCAATCGCCTTTCACAATACTAATGTTAGCTTTTCTACTATATATCCACAGGTACTAGAAAATTGAAATAATAATAATATTTACTGGCGACGATTTTTTTCGGTGATTTTTGAACGGATGACACATTAAATAGATGTGATTGGATAAACTTTTACCAAAAGAGAACTTTGAGTTAAGATGCATGAGAGGGGAAGTGAAAGTTGAGCTAGATTTATATGTATATATGTACATGAAAAGTAAAATTGACTGGTGGAGAACTGGGAGGAAATCGTTTCTTTGCTGCACTGGATAAGAGAGCAAAGCGATTGAATACTGTTGAAAAGCTAGCAATTAAAAACAACTAAATACTATTGAAAAGCTTAATGTGAATAAGCTGAAGAATAATTTTTTGAAGTATTATCTGGTTATGTGATACGTAGTAGCATTTCAAAGAGAAAATGTGATACTTGCCTATTCTCGTGGCACACACCTTCCTGGTGATAATGCTACTGCCATAAGTTATACTGCTTCAAGACTAATTTTCATATTTGGGGGAGGGGGTCTGGATCTGTCTCAAATGCAGAACTGTACTACTATTTCCTCATGGTCACGAAAGCTTGCTAATAGCTGTTCAAATGTGATTATTGGGATCCAAATTTGATATTGATGATAGGTTTTGTCTCTTTGGATTTGTTAGCTTTTTCTTGCTTTGTCATTGCCATCATGTCGAACTACTTCCTCCAGTGTGTCTTGCAACCACTAACTGGTAACTAGAAAGTGAGCATAATACTGCTTTTACAATTTTCAGCTAGACCCAACTTGAAATGCTAAGATTTTTTTGGTATCCATTATTGAAATGTCTGTCTCCTGTTGCTCTATTGAATACATTTTGTTCCATGAAAAGAAACAACAGTAGCATGTTTATTTAGTTATAATTTACATCAAACACCATTCCATGCTGATGGATTTTAATGTTTCATGTTTTTGCAGCAACCCGGCTCTTCAAAAGATAAAATTGTGGGGAAGAATGTTCAGGAAAAGAGGATGCAGGTTATCTCTTAATGGCCAATCCATATATTCTTGCATTTATTAGACGGGGCATGTCTTTCTTGAAAATCATAACTGATATACTTCATTTAGGCCCCAGCTTAAGCCATCAAACTATATCATCAATTATTGCGAAGCATTAATATATTCTGAAGTAGGATAGGATGGAAATTTTGTACACGTTGTCAATTATTAGGCTTTTGCTTTTCCTGGAATAGGAAACTAATTGTCTGGCCTAGTGATGGTGGTTTCCTTAATAACTCTTTTAGTGTAATGAGAACTAACATCTAGTAGTAGAATAAATGTCGTGGATAAGTCTTTGATATTCACTTTGTTTTATTCCTTCGTTCAGATGGAGTTGGTGGCATCTCCTTCATTTGCAGCTGCTGGTCAGCAAAAACTTGCTAAATTGGACAATTTCCTAGAAGCTCCCCCAATTTCGTCATAT-CCTGTAAGTTAAATTTTTGTTGTATCAAGATATGCAATTTTTTTCATTGTCTGCTTTACCTATATGTTGATATTCTGAGGGATAGGATCGTGTTAGCCTGTCACAACAGAAACCACTCAGTGTCCTTCATCGGGCAAACAAACAAAAAATAATTCTTCAATCACTTTGGCAATAAGAGGTAATAAGAATGTAGAACAGTGAATATAGCATAAATATAACAATATCTGATCAGCCTCAGGAACTCATGTCACAACTCACAAGTCATGATCACTAAGAATATGAGATACAATTCTGTATGAGACTAATGCATAATCAATCTGAAGTACAAATCAGAACAAAAAGACCCTAAGTTACCATGAACAAGCTGATAGCTCAACAGCTCACACTGGGATGTTGATAGATCTTGAGTGCTCACTCACGTACTCTGCTGAAGCTTGAATCTATATCTGCACACTCGGTGCAGAAGTGTAGGGGAGTAAGAGTACTCAGTAAGTATCTTTGACCTCTCCAAATAAGATAGTGGCAAGAGACAATATAGAAGGTTCTCACTTTTAAACCTGTGCAATTACTATCTACAATAATTACAGAAATAGTAATGTGCTTTGAACTTATATTTTGAGCCACTGTATTTATTTTGTGGTACTTCAGTTCCAAGTCAAAATATCATGTCTCTGCGACATATGTAAGATATTGTAGCTGAGTTGGTCTTATTTCGCCAAATAGGGTGGTGTGACTCGCTTGTAATATGATGAACACACTGTTTTCTTTAAGTACTAGTATCTTTATGTGATCTTTGCTTGAAGCTTGGAAGAACAATTTTGTAAATAGATGCCTTCAGTCTCCCTACATGCAGTGTTCATGCATCCTTGAGTTTGATGGGGCTTCAAAGGGGAATCCTGGTCTAGCTGGTGCTGGGGCTGTGCTGCGTGCTGC</genome_strand>
        <mrna_strand>TAATCAGCCCAATTGATGTTTCCGGCAAAACAGCCCAAATATGCAGTTTCGGATCAAAATTAGCTGAAATATTACACGACTTCCCAAAATGAAACTTGAGAGATCAGCTACTGACAAAGACAAAACTCCATTAAAACTCCCTTTCTTCACCTTCCAACCAACTACACCCTTCACTCTCCTCTTCCGCTCG............................................................................................................................................................................................................................................TGCTGGAGTTACTTGCAAAGTCAAGTCGAAACGTTGGAGTTGGAAACATAAAATGGGGGACGAGAAGGATGCGTTCTATGTCGTGCGCAAAGGGGATGTGATCGGGGTTTATAAGAACTTGAGCGATTTGCAAGCTTTGCTACGAACATCT.....................................................................................................................................................................................................................................................................................................ATTGGTGAACCAGCCATAAGCGTTTTTAAAGGGTATCGCTTGACTAAGGAATCTGAAGAGTATCTGGCCTCTCATGGACTCAAGAATGCAATGTATTCTATGGATTTCAGTGATGTTCGAGACGATCTCTTTGGGACTCTCATCCCATGCCCATTTCGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACCCGGCTCTTCAAAAGATAANATTGTGGGGAAGAATGTTCAGGAAAAGAGGATGCAN.............................................................................................................................................................................................................................................................................................................................................................ATGGAGTTGGTGGCATCTCCTTCATTTGCAGCTGCTGGTCAGCAAAAACTTGCTAAATTGGACAATTTCCTAGAAGCTCCCCCAATTTCGTCATATNCNT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................NCTCCCTACNTGCAGNGNTCATGCATCCTTGANTTTGANGGGGCTTCNAAGGGGAATCCTGGNCTAGCTGGTGCTGGGGCTGTGCTGCGTGCTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U567596" ref_strand="+" ref_description="SGN-U567596 Tomato 200607#2 [20 ESTs aligned] (*GB) gi|157345523|emb|CAO14821.1| (e_value=7e-73) unnamed; (*ATH) AT3G01410.1 (e_value=2e-72) | Symbol: None | RNase H domain-containing protein, low similarity to GAG-POL precursor (Oryza sativa (japonica cultivar-group)) GI:5902445; contains Pfam profile: PF00075 RNase H | chr3:153446-155606 REVERSE | Aliases: T13O15.5, T13O15_5; (*SWP) sp|P64955|Y2228_MYCTU (e_value=5e-13) Uncharacterized protein Rv2228c/MT2287 OS=Mycobacterium tuberculosis GN=Rv2228c; ">
      <seq>ggtgaagaaaatgccctaaatcatatagtaataatacgtagaccgtacattgttctctgagtcttcaaatcaaagacaaaactccattaaaactccctttcttcaccttccaaccaactacacccttcactctcctcttccgctcgtgctggagttacttgcaaagtcaagtcgaaacgttggagttggaaacataaaatgggggacgagaaggatgcgttctatgtcgtgcgcaaaggggatgtgatcggggtttataagaacttgagcgatttgcaagctttgctacgaacatctattggtgaaccagccataagcgtttttaaagggtatcgcttgactaaggaatctgaagagtatctggcctctcatggactcaagaatgcaatgtattctatggatttcagtgatgttcgagacgatctctttgggactctcatcccatgcccatttcggcaacccggctcttcaaaagataaaattgtggggaagaatgttcaggaaaagaggatgcagatggagttggtggcatctccttcatttgcagctgctggtcagcaaaaacttgctaaattggacaatttcctagaagctcccccaatttcgtcatatccttctccctacatgcagtgttcatgcatccttgagtttgatggggcttcaaaggggaatcctggtctagctggtgctggggctgtgctgcgtgctgcagatggaagtatggttttccggctgcgtgaaggtgtaggtgtggcaactaacaatgttgctgaatacagaggcgtaatcttaggactaagatatgctcttgagaaaggtttcaaacacattaaagtcaagggcgattcgaaacttgtctgcatgcagactcaaggaatctggaaatgcaagaatcagaacatggctgagctatccaagattgttaaagagcttaaagatcagtttatgtctttccagatcaaccacatggacagagaatccaacactgaagccgatgcccaggcaaatttagccgtgtatctcaagaatggcgaaattcaagtggaatgtgacatgataacttaattaagtcaccaactactacctcaacttgttgggatttaggaaatgatgaatgaccgccaagacagaccaatttggatattcagttgtctgaaactacacttgtaacatgtagatatatgatctgaattatgtgcatgtaacctaattatgtatctggattgaaagtagcttctgctgtaacctaatttgcaatgaaaattggttgggacaagtacaccaggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0014P22.2" temp_strand="+" temp_description="C02SLm0014P22.2  AC215471.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0014P22 sequenced_by:kribb upload_account_name:korea">
        <position start="15233" stop="22503"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15545" g_stop="15619" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="72" r_stop="146" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15620" i_stop="15855" i_length="236">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15856" g_stop="16006" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="147" r_stop="297" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="16007" i_stop="16299" i_length="293">
            <donor d_prob="0.951" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="16300" g_stop="16458" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="298" r_stop="456" r_length="159" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="16459" i_stop="18243" i_length="1785">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18244" g_stop="18303" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="457" r_stop="516" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="18304" i_stop="18652" i_length="349">
            <donor d_prob="0.835" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="18653" g_stop="18751" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="517" r_stop="615" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="18752" i_stop="19586" i_length="835">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="19587" g_stop="19694" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="616" r_stop="723" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="19695" i_stop="19774" i_length="80">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="19775" g_stop="19918" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="724" r_stop="867" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="19919" i_stop="21297" i_length="1379">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.518" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="21298" g_stop="21405" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="868" r_stop="975" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="21406" i_stop="21822" i_length="417">
            <donor d_prob="0.842" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="21823" g_stop="21874" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="976" r_stop="1027" r_length="52" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="21875" i_stop="21943" i_length="69">
            <donor d_prob="0.273" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="21944" g_stop="22203" g_length="260"/>
          <reference_exon_boundary r_type="cDNA" r_start="1028" r_stop="1287" r_length="260" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0014P22.2" gen_strand="+" ref_id="SGN-U567596" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1216</cumulative_length_of_scored_exons>
        <coverage percentage="0.945" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0014P22.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U567596" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15545" e_stop="15619"/>
          <exon e_start="15856" e_stop="16006"/>
          <exon e_start="16300" e_stop="16458"/>
          <exon e_start="18244" e_stop="18303"/>
          <exon e_start="18653" e_stop="18751"/>
          <exon e_start="19587" e_stop="19694"/>
          <exon e_start="19775" e_stop="19918"/>
          <exon e_start="21298" e_stop="21405"/>
          <exon e_start="21823" e_stop="21874"/>
          <exon e_start="21944" e_stop="22203"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGACAAAACTCCATTAAAACTCCCTTTCTTCACCTTCCAACCAACTACACCCTTCACTCTCCTCTTCCGCTCGGTAAGAAGTTTCCTTCTTTTCACTTTTCTCTGTTTTCGAATAAATCCTAATTCCATATATCTGTCGGAATTCGGGTCTATTTGAAAAAAAGTGTGAAGAAAATGCCCTAAATCATATAGTAATAATACGTAGACCGTACATTGTTCTCTGAGTCTTCAAATCGTTGAGGAAATTGGGCACTTGTAGTTGTTGTTTCGTTTCGTCTTTTGCTAAAACTTATGATTGTGTTGATACAGTGCTGGAGTTACTTGCAAAGTCAAGTCGAAACGTTGGAGTTGGAAACATAAAATGGGGGACGAGAAGGATGCGTTCTATGTCGTGCGCAAAGGGGATGTGATCGGGGTTTATAAGAACTTGAGCGATTTGCAAGCTTTGCTACGAACATCTGTATGTTTCTTTTACCTTTTAAGGTTTAAATACTTTTCTGCTTTTGGGCCAAAGACAGTTTCCTTTATAGTCATTGTATCTATTGTACTGCTACTTTTTTTTTTTTTGGTCTTTTATAGCTCTAGTATAGGAAGAGTTCAATTATTCCAGCTTTTGAACAATGATGAAGAAATAGTTGGATACATTATAGCCAATCCCATTAGTGTAGTGTTGATTGATTAATTAGACCAAAAGTAATAATACTATCAGATGTTTCTTTTTTTAAATGTATTATTTTAATTCTAATCTTTCAGATTGGTGAACCAGCCATAAGCGTTTTTAAAGGGTATCGCTTGACTAAGGAATCTGAAGAGTATCTGGCCTCTCATGGACTCAAGAATGCAATGTATTCTATGGATTTCAGTGATGTTCGAGACGATCTCTTTGGGACTCTCATCCCATGCCCATTTCGGGTTAGAAAGTTAATCATTCTGCTGTTTTTGAATTGGCATTAGATGCAGTTGTCTTATCTATTTGGTAGTAATGTCAATTTGATGATAGTTGGGTCAAATTTTGGCTATTTTCCGGCTTTGAAAGATATATATAAATCCTTCATGATTTGGACTATAGTACTGCGCCACTAGCTTGACTGACTGCGTGAATTTCTCGGTCAGGCTGATCTCCCCCCCTCCCCTCCCTTTTTTTTTTAGAATGTTAGGCCAGTGTTTTAGACGGCGATAGGCGATAAAAGGCGACAAGGGTCTGCCTCGCCACAAGGCGAGGCGAACGGCGAGGCGCTCGCCTTTTTGAAGTGCGGCACCTTTTAATACCAAAATATTTAAAATTTTAATTGCATATGTAAATAATCAAACAATAACATATTAGCAATTTTTTCAAATTAAAAACTAAAAATAGATAGTACGTACTAAAAGCCTAGAACATGAAAGAGAAAAAAAAGAACAAAAGTCAAAACAAAGGTAAAAGTGACCAACTCTGAAGAAGAAAACAAGAAATATGTATTGGTTAGACTTTGGAGTCGCCGGAAAAGCCTGGCAAGTTACCGGAGGAGTCTAGTCGAAAATCCTAAAATTACCTTTTAATTTTTAAAAAATCCTAAATTTGTCGCCTTTTTTTTTAAAAAAAAACACAAAAGGCGACACCTTCCTAGCCTTTCTCGCCTCTAGCCTTTTGTCGACATGACGTCGCCTTTTGAAGATTGCCTCGCCACAAAGCTAAAAGGCAATGAAGGGTCGCCTCGCCTCGCCTCGCCTCTTGCCATTGGCGACGAGGCAATCGCCTTTCACAATACTAATGTTAGCTTTTCTACTATATATCCACAGGTACTAGAAAATTGAAATAATAATAATATTTACTGGCGACGATTTTTTTCGGTGATTTTTGAACGGATGACACATTAAATAGATGTGATTGGATAAACTTTTACCAAAAGAGAACTTTGAGTTAAGATGCATGAGAGGGGAAGTGAAAGTTGAGCTAGATTTATATGTATATATGTACATGAAAAGTAAAATTGACTGGTGGAGAACTGGGAGGAAATCGTTTCTTTGCTGCACTGGATAAGAGAGCAAAGCGATTGAATACTGTTGAAAAGCTAGCAATTAAAAACAACTAAATACTATTGAAAAGCTTAATGTGAATAAGCTGAAGAATAATTTTTTGAAGTATTATCTGGTTATGTGATACGTAGTAGCATTTCAAAGAGAAAATGTGATACTTGCCTATTCTCGTGGCACACACCTTCCTGGTGATAATGCTACTGCCATAAGTTATACTGCTTCAAGACTAATTTTCATATTTGGGGGAGGGGGTCTGGATCTGTCTCAAATGCAGAACTGTACTACTATTTCCTCATGGTCACGAAAGCTTGCTAATAGCTGTTCAAATGTGATTATTGGGATCCAAATTTGATATTGATGATAGGTTTTGTCTCTTTGGATTTGTTAGCTTTTTCTTGCTTTGTCATTGCCATCATGTCGAACTACTTCCTCCAGTGTGTCTTGCAACCACTAACTGGTAACTAGAAAGTGAGCATAATACTGCTTTTACAATTTTCAGCTAGACCCAACTTGAAATGCTAAGATTTTTTTGGTATCCATTATTGAAATGTCTGTCTCCTGTTGCTCTATTGAATACATTTTGTTCCATGAAAAGAAACAACAGTAGCATGTTTATTTAGTTATAATTTACATCAAACACCATTCCATGCTGATGGATTTTAATGTTTCATGTTTTTGCAGCAACCCGGCTCTTCAAAAGATAAAATTGTGGGGAAGAATGTTCAGGAAAAGAGGATGCAGGTTATCTCTTAATGGCCAATCCATATATTCTTGCATTTATTAGACGGGGCATGTCTTTCTTGAAAATCATAACTGATATACTTCATTTAGGCCCCAGCTTAAGCCATCAAACTATATCATCAATTATTGCGAAGCATTAATATATTCTGAAGTAGGATAGGATGGAAATTTTGTACACGTTGTCAATTATTAGGCTTTTGCTTTTCCTGGAATAGGAAACTAATTGTCTGGCCTAGTGATGGTGGTTTCCTTAATAACTCTTTTAGTGTAATGAGAACTAACATCTAGTAGTAGAATAAATGTCGTGGATAAGTCTTTGATATTCACTTTGTTTTATTCCTTCGTTCAGATGGAGTTGGTGGCATCTCCTTCATTTGCAGCTGCTGGTCAGCAAAAACTTGCTAAATTGGACAATTTCCTAGAAGCTCCCCCAATTTCGTCATATCCTGTAAGTTAAATTTTTGTTGTATCAAGATATGCAATTTTTTTCATTGTCTGCTTTACCTATATGTTGATATTCTGAGGGATAGGATCGTGTTAGCCTGTCACAACAGAAACCACTCAGTGTCCTTCATCGGGCAAACAAACAAAAAATAATTCTTCAATCACTTTGGCAATAAGAGGTAATAAGAATGTAGAACAGTGAATATAGCATAAATATAACAATATCTGATCAGCCTCAGGAACTCATGTCACAACTCACAAGTCATGATCACTAAGAATATGAGATACAATTCTGTATGAGACTAATGCATAATCAATCTGAAGTACAAATCAGAACAAAAAGACCCTAAGTTACCATGAACAAGCTGATAGCTCAACAGCTCACACTGGGATGTTGATAGATCTTGAGTGCTCACTCACGTACTCTGCTGAAGCTTGAATCTATATCTGCACACTCGGTGCAGAAGTGTAGGGGAGTAAGAGTACTCAGTAAGTATCTTTGACCTCTCCAAATAAGATAGTGGCAAGAGACAATATAGAAGGTTCTCACTTTTAAACCTGTGCAATTACTATCTACAATAATTACAGAAATAGTAATGTGCTTTGAACTTATATTTTGAGCCACTGTATTTATTTTGTGGTACTTCAGTTCCAAGTCAAAATATCATGTCTCTGCGACATATGTAAGATATTGTAGCTGAGTTGGTCTTATTTCGCCAAATAGGGTGGTGTGACTCGCTTGTAATATGATGAACACACTGTTTTCTTTAAGTACTAGTATCTTTATGTGATCTTTGCTTGAAGCTTGGAAGAACAATTTTGTAAATAGATGCCTTCAGTCTCCCTACATGCAGTGTTCATGCATCCTTGAGTTTGATGGGGCTTCAAAGGGGAATCCTGGTCTAGCTGGTGCTGGGGCTGTGCTGCGTGCTGCAGATGGAAGTATGGTATGCTCCCTATCCTTTTAGAAGATGTGGTTTGTCACCACAAATTTACAGGTTTTCGACTTTGTGATTCTTTTCTGTAGGTTTTCCGGCTGCGTGAAGGTGTAGGTGTGGCAACTAACAATGTTGCTGAATACAGAGGCGTAATCTTAGGACTAAGATATGCTCTTGAGAAAGGTTTCAAACACATTAAAGTCAAGGGCGATTCGAAACTTGTCTGCATGCAGGTCTTCTTTCTCTACTTCTTACAGCTGTTTTTTTTAGTTTTATTCATTTTTAATTTGCTTTTAGTAAATTAGTCAATTTTTCTGCTTTCTCACTTTAAATATCCTGTCAAATTTGTATATCTTCAGTAATTTATTGAAATCACTGATTTCTAAAACAATTGCTGAAGAGTCTTTTCAATTGAGTGTCAGAGACATATTCATTGAACTGGGCTACACCAACAGAAAGTGGACCGTTCAATATAAGGAGACACATGGTTTTTAACCAACTAGTTTTTGGACATGTACATCCCAAATTAACTAGAATATGATTTTGCATAATCACATAAAATTATTGAAAAATATTTTTGAGTAACAAAACACACATTAATTAAGATTCATGAATGTGATTCTTCATTTGGGACTTCATGGTTGAGCCCCCCTCCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAACCACCATACACACACAAAGATAAATGAATGTGTGTGTATAATTCATTTAATCATAATTCATAGTCATAGCAAAATCAACCGAATGTAACATCAACAATACTTTCAGTTCTATAAAGGTCTCTCCGGCTGCTTTTTAATGCACAATGTTATCATTTTTTTTCTTGTTTTTTCAAGCACTAACCATGTCTTCACCTCAACTTTTTCCTCACGAATTGTAATTCTGCATATCATCTTTTTCCTTTTGATGAGTCAGTTGATTAGGCCAGCTACATAAAAACATGAAATACTATGATAAAAAAGAGAGAGAGATGATCAAAGAAGGCTTTTAAACAGAAATGACAAAACCTAAGCAATATCCACCAAGTTTTGAATTGTGCATCACTGGCCCTCGAGGATTTCTCGGTTATAATTAGAAAATGGCAAAGCTAAGAGCTGTTGTGGCATAAAAGAATGCAGCAGCTGGCTAGCAGTTTGGCAACCCGCATTGTGTTGTGAAAACTTGCTTCTCAATATCCCAATTTGAATCCCGGAGAACATATGGTGTAGGTTAATGATTAATTCAAGAAACTTATTTTACTTGGCTTTTATTTTGGCTTTATTACCAAATGCCTAAGATTTTACAGTGACAGGTTTAGGAGCGACTATAAAGACCCTATAGGATTTGAGACATATTCAGCCTATATGTAATTTGATAGGAATTATGGGATGGCATAGCTTGCCTTCTTGATGGTACCTCATCCTATCCATCCCAAGAGACACCTAAACCAGTTTAAAAGTGAAGCTATTCTTCCCTTGCAACCTATGTGATCTTACGCTGAGATCATATGTGCTTTTGCCGTGCTATTTATATTTTTTTCAGTTTTATGTTTTAGCTGGAACTGCTTCTGGGCCGGTCTCTTGTTTTTACAAATTTCTTCATGGAACAGACTCAAGGAATCTGGAAATGCAAGAATCAGAACATGGCTGAGCTATCCAAGATTGTTAAAGAGCTTAAAGATCAGTTTATGTCTTTCCAGATCAACCACATGGACAGAGTATGGCCAATTTTTCCTCTTTTGCTAATTTGAAGCTCACTGAGCTGGTCTATCAGAATTTTGATTTTCGAAGTCCTTATTATATCTTGCAACTGCATGTTGTTTTTGTGATAAATATGGAGTAGTGTGGTCTCCTGTGACCAAAAGAGGTGCAAGCGGTGGTACCTGGACGTCATGTTTAATTTATGCAATATATATAGTTTCTCTTTTCTTGCTAAGCTGTTCTTCGAAATTGATTTTATCACCTTGTTGCTAGAAGTGAATAATCATGCTTCCCTAGTCAATCAATTCACTCTGTTCTGGTTGCTCTGCATGAACAGTTCAGAATTTTTCTGCACATAATTGTTCCGTTCTTTTTAATCATTTAAAGCCTTTTTTCATCCAATTCCAAGGGTTTTTACTTGTTTAACATATCAGGAATCCAACACTGAAGCCGATGCCCAGGCAAATTTAGCCGTGTATCTCAAGAGTAAGGGTCTTTTGTCTTGTGAGTTTCTCTTTTTCCGTGAGAAATCTAATAAGAAATATTTTGTTGCAGATGGCGAAATTCAAGTGGAATGTGACATGATAACTTAATTAAGTCACCAACTACTACCTCAACTTGTTGGGATTTAGGAAATGATGAATGACCGCCAAGACAGACCAATTTGGATATTCAGTTGTCTGAAACTACACTTGTAACATGTAGATATATGATCTGAATTATGTGCATGTAACCTAATTATGTATCTGGATTGAAAGTAGCTTCTGCTGTAACCTAATTTGCAATGAAAATTGGTTGGGACAAGTACACCAGGC</genome_strand>
        <mrna_strand>AAAGACAAAACTCCATTAAAACTCCCTTTCTTCACCTTCCAACCAACTACACCCTTCACTCTCCTCTTCCGCTCG............................................................................................................................................................................................................................................TGCTGGAGTTACTTGCAAAGTCAAGTCGAAACGTTGGAGTTGGAAACATAAAATGGGGGACGAGAAGGATGCGTTCTATGTCGTGCGCAAAGGGGATGTGATCGGGGTTTATAAGAACTTGAGCGATTTGCAAGCTTTGCTACGAACATCT.....................................................................................................................................................................................................................................................................................................ATTGGTGAACCAGCCATAAGCGTTTTTAAAGGGTATCGCTTGACTAAGGAATCTGAAGAGTATCTGGCCTCTCATGGACTCAAGAATGCAATGTATTCTATGGATTTCAGTGATGTTCGAGACGATCTCTTTGGGACTCTCATCCCATGCCCATTTCGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACCCGGCTCTTCAAAAGATAAAATTGTGGGGAAGAATGTTCAGGAAAAGAGGATGCAG.............................................................................................................................................................................................................................................................................................................................................................ATGGAGTTGGTGGCATCTCCTTCATTTGCAGCTGCTGGTCAGCAAAAACTTGCTAAATTGGACAATTTCCTAGAAGCTCCCCCAATTTCGTCATATCCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCCCTACATGCAGTGTTCATGCATCCTTGAGTTTGATGGGGCTTCAAAGGGGAATCCTGGTCTAGCTGGTGCTGGGGCTGTGCTGCGTGCTGCAGATGGAAGTATG................................................................................GTTTTCCGGCTGCGTGAAGGTGTAGGTGTGGCAACTAACAATGTTGCTGAATACAGAGGCGTAATCTTAGGACTAAGATATGCTCTTGAGAAAGGTTTCAAACACATTAAAGTCAAGGGCGATTCGAAACTTGTCTGCATGCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCAAGGAATCTGGAAATGCAAGAATCAGAACATGGCTGAGCTATCCAAGATTGTTAAAGAGCTTAAAGATCAGTTTATGTCTTTCCAGATCAACCACATGGACAGA.................................................................................................................................................................................................................................................................................................................................................................................................................................GAATCCAACACTGAAGCCGATGCCCAGGCAAATTTAGCCGTGTATCTCAAGA.....................................................................ATGGCGAAATTCAAGTGGAATGTGACATGATAACTTAATTAAGTCACCAACTACTACCTCAACTTGTTGGGATTTAGGAAATGATGAATGACCGCCAAGACAGACCAATTTGGATATTCAGTTGTCTGAAACTACACTTGTAACATGTAGATATATGATCTGAATTATGTGCATGTAACCTAATTATGTATCTGGATTGAAAGTAGCTTCTGCTGTAACCTAATTTGCAATGAAAATTGGTTGGGACAAGTACACCAGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U596127" ref_strand="+" ref_description="SGN-U596127 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157345523|emb|CAO14821.1| (e_value=9e-26) unnamed; (*ATH) AT3G01410.1 (e_value=5e-27) | Symbol: None | RNase H domain-containing protein, low similarity to GAG-POL precursor (Oryza sativa (japonica cultivar-group)) GI:5902445; contains Pfam profile: PF00075 RNase H | chr3:153446-155606 REVERSE | Aliases: T13O15.5, T13O15_5; ">
      <seq>atatagtaataatacgtagaccgtacattgttctctgagtcttcaaatcgttgaggaaattgggcacttgtagttgttgtttcgtttcgtcttttgctaaaacttatgattgtgttgatacagtgctggagttacttgcaaagtcaagtcgaaacgttggagttggaaacataaaatgggggacgagaaggatgcgttctatgtcgtgcgcaaaggggatgtgatcggggtttataagaacttgagcgatttgcaagctttgctacgaacatctcaacccggctcttcaaaagataaaattgtggggaagaatgttcaggaaaagaggatgcagatggagttggtggcatctccttcatttgcagctgctggtcagcaaaaacttgctaaattggacaatttcctagaagctcccccaatttcgtcatatccttgttcatgcatccttgagtttgatggggcttcaaagtggaatcctggtctagctggtgctggggctgtgctgcgtgctgcagatggaagtatggttttccggctgcgtgaaggtgtaggtgtggcaactaacaatgttgctgnatacagaggcgtaatcttaggactaanatatgctcttgagaaaggtttcaaacacattaaagtcangggcgattcgaaacttgtctgcatgcanactca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0014P22.2" temp_strand="+" temp_description="C02SLm0014P22.2  AC215471.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0014P22 sequenced_by:kribb upload_account_name:korea">
        <position start="15433" stop="20217"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15733" g_stop="16006" g_length="274"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="274" r_length="274" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16007" i_stop="18243" i_length="2237">
            <donor d_prob="0.951" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18244" g_stop="18303" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="275" r_stop="334" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18304" i_stop="18652" i_length="349">
            <donor d_prob="0.835" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18653" g_stop="18751" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="335" r_stop="433" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18752" i_stop="19601" i_length="850">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.677" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19602" g_stop="19694" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="434" r_stop="526" r_length="93" r_score="0.989"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="19695" i_stop="19774" i_length="80">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="19775" g_stop="19914" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="527" r_stop="666" r_length="140" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0014P22.2" gen_strand="+" ref_id="SGN-U596127" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>666</cumulative_length_of_scored_exons>
        <coverage percentage="0.987" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0014P22.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U596127" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15733" e_stop="16006"/>
          <exon e_start="18244" e_stop="18303"/>
          <exon e_start="18653" e_stop="18751"/>
          <exon e_start="19602" e_stop="19694"/>
          <exon e_start="19775" e_stop="19914"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATATAGTAATAATACGTAGACCGTACATTGTTCTCTGAGTCTTCAAATCGTTGAGGAAATTGGGCACTTGTAGTTGTTGTTTCGTTTCGTCTTTTGCTAAAACTTATGATTGTGTTGATACAGTGCTGGAGTTACTTGCAAAGTCAAGTCGAAACGTTGGAGTTGGAAACATAAAATGGGGGACGAGAAGGATGCGTTCTATGTCGTGCGCAAAGGGGATGTGATCGGGGTTTATAAGAACTTGAGCGATTTGCAAGCTTTGCTACGAACATCTGTATGTTTCTTTTACCTTTTAAGGTTTAAATACTTTTCTGCTTTTGGGCCAAAGACAGTTTCCTTTATAGTCATTGTATCTATTGTACTGCTACTTTTTTTTTTTTTGGTCTTTTATAGCTCTAGTATAGGAAGAGTTCAATTATTCCAGCTTTTGAACAATGATGAAGAAATAGTTGGATACATTATAGCCAATCCCATTAGTGTAGTGTTGATTGATTAATTAGACCAAAAGTAATAATACTATCAGATGTTTCTTTTTTTAAATGTATTATTTTAATTCTAATCTTTCAGATTGGTGAACCAGCCATAAGCGTTTTTAAAGGGTATCGCTTGACTAAGGAATCTGAAGAGTATCTGGCCTCTCATGGACTCAAGAATGCAATGTATTCTATGGATTTCAGTGATGTTCGAGACGATCTCTTTGGGACTCTCATCCCATGCCCATTTCGGGTTAGAAAGTTAATCATTCTGCTGTTTTTGAATTGGCATTAGATGCAGTTGTCTTATCTATTTGGTAGTAATGTCAATTTGATGATAGTTGGGTCAAATTTTGGCTATTTTCCGGCTTTGAAAGATATATATAAATCCTTCATGATTTGGACTATAGTACTGCGCCACTAGCTTGACTGACTGCGTGAATTTCTCGGTCAGGCTGATCTCCCCCCCTCCCCTCCCTTTTTTTTTTAGAATGTTAGGCCAGTGTTTTAGACGGCGATAGGCGATAAAAGGCGACAAGGGTCTGCCTCGCCACAAGGCGAGGCGAACGGCGAGGCGCTCGCCTTTTTGAAGTGCGGCACCTTTTAATACCAAAATATTTAAAATTTTAATTGCATATGTAAATAATCAAACAATAACATATTAGCAATTTTTTCAAATTAAAAACTAAAAATAGATAGTACGTACTAAAAGCCTAGAACATGAAAGAGAAAAAAAAGAACAAAAGTCAAAACAAAGGTAAAAGTGACCAACTCTGAAGAAGAAAACAAGAAATATGTATTGGTTAGACTTTGGAGTCGCCGGAAAAGCCTGGCAAGTTACCGGAGGAGTCTAGTCGAAAATCCTAAAATTACCTTTTAATTTTTAAAAAATCCTAAATTTGTCGCCTTTTTTTTTAAAAAAAAACACAAAAGGCGACACCTTCCTAGCCTTTCTCGCCTCTAGCCTTTTGTCGACATGACGTCGCCTTTTGAAGATTGCCTCGCCACAAAGCTAAAAGGCAATGAAGGGTCGCCTCGCCTCGCCTCGCCTCTTGCCATTGGCGACGAGGCAATCGCCTTTCACAATACTAATGTTAGCTTTTCTACTATATATCCACAGGTACTAGAAAATTGAAATAATAATAATATTTACTGGCGACGATTTTTTTCGGTGATTTTTGAACGGATGACACATTAAATAGATGTGATTGGATAAACTTTTACCAAAAGAGAACTTTGAGTTAAGATGCATGAGAGGGGAAGTGAAAGTTGAGCTAGATTTATATGTATATATGTACATGAAAAGTAAAATTGACTGGTGGAGAACTGGGAGGAAATCGTTTCTTTGCTGCACTGGATAAGAGAGCAAAGCGATTGAATACTGTTGAAAAGCTAGCAATTAAAAACAACTAAATACTATTGAAAAGCTTAATGTGAATAAGCTGAAGAATAATTTTTTGAAGTATTATCTGGTTATGTGATACGTAGTAGCATTTCAAAGAGAAAATGTGATACTTGCCTATTCTCGTGGCACACACCTTCCTGGTGATAATGCTACTGCCATAAGTTATACTGCTTCAAGACTAATTTTCATATTTGGGGGAGGGGGTCTGGATCTGTCTCAAATGCAGAACTGTACTACTATTTCCTCATGGTCACGAAAGCTTGCTAATAGCTGTTCAAATGTGATTATTGGGATCCAAATTTGATATTGATGATAGGTTTTGTCTCTTTGGATTTGTTAGCTTTTTCTTGCTTTGTCATTGCCATCATGTCGAACTACTTCCTCCAGTGTGTCTTGCAACCACTAACTGGTAACTAGAAAGTGAGCATAATACTGCTTTTACAATTTTCAGCTAGACCCAACTTGAAATGCTAAGATTTTTTTGGTATCCATTATTGAAATGTCTGTCTCCTGTTGCTCTATTGAATACATTTTGTTCCATGAAAAGAAACAACAGTAGCATGTTTATTTAGTTATAATTTACATCAAACACCATTCCATGCTGATGGATTTTAATGTTTCATGTTTTTGCAGCAACCCGGCTCTTCAAAAGATAAAATTGTGGGGAAGAATGTTCAGGAAAAGAGGATGCAGGTTATCTCTTAATGGCCAATCCATATATTCTTGCATTTATTAGACGGGGCATGTCTTTCTTGAAAATCATAACTGATATACTTCATTTAGGCCCCAGCTTAAGCCATCAAACTATATCATCAATTATTGCGAAGCATTAATATATTCTGAAGTAGGATAGGATGGAAATTTTGTACACGTTGTCAATTATTAGGCTTTTGCTTTTCCTGGAATAGGAAACTAATTGTCTGGCCTAGTGATGGTGGTTTCCTTAATAACTCTTTTAGTGTAATGAGAACTAACATCTAGTAGTAGAATAAATGTCGTGGATAAGTCTTTGATATTCACTTTGTTTTATTCCTTCGTTCAGATGGAGTTGGTGGCATCTCCTTCATTTGCAGCTGCTGGTCAGCAAAAACTTGCTAAATTGGACAATTTCCTAGAAGCTCCCCCAATTTCGTCATATCCTGTAAGTTAAATTTTTGTTGTATCAAGATATGCAATTTTTTTCATTGTCTGCTTTACCTATATGTTGATATTCTGAGGGATAGGATCGTGTTAGCCTGTCACAACAGAAACCACTCAGTGTCCTTCATCGGGCAAACAAACAAAAAATAATTCTTCAATCACTTTGGCAATAAGAGGTAATAAGAATGTAGAACAGTGAATATAGCATAAATATAACAATATCTGATCAGCCTCAGGAACTCATGTCACAACTCACAAGTCATGATCACTAAGAATATGAGATACAATTCTGTATGAGACTAATGCATAATCAATCTGAAGTACAAATCAGAACAAAAAGACCCTAAGTTACCATGAACAAGCTGATAGCTCAACAGCTCACACTGGGATGTTGATAGATCTTGAGTGCTCACTCACGTACTCTGCTGAAGCTTGAATCTATATCTGCACACTCGGTGCAGAAGTGTAGGGGAGTAAGAGTACTCAGTAAGTATCTTTGACCTCTCCAAATAAGATAGTGGCAAGAGACAATATAGAAGGTTCTCACTTTTAAACCTGTGCAATTACTATCTACAATAATTACAGAAATAGTAATGTGCTTTGAACTTATATTTTGAGCCACTGTATTTATTTTGTGGTACTTCAGTTCCAAGTCAAAATATCATGTCTCTGCGACATATGTAAGATATTGTAGCTGAGTTGGTCTTATTTCGCCAAATAGGGTGGTGTGACTCGCTTGTAATATGATGAACACACTGTTTTCTTTAAGTACTAGTATCTTTATGTGATCTTTGCTTGAAGCTTGGAAGAACAATTTTGTAAATAGATGCCTTCAGTCTCCCTACATGCAGTGTTCATGCATCCTTGAGTTTGATGGGGCTTCAAAGGGGAATCCTGGTCTAGCTGGTGCTGGGGCTGTGCTGCGTGCTGCAGATGGAAGTATGGTATGCTCCCTATCCTTTTAGAAGATGTGGTTTGTCACCACAAATTTACAGGTTTTCGACTTTGTGATTCTTTTCTGTAGGTTTTCCGGCTGCGTGAAGGTGTAGGTGTGGCAACTAACAATGTTGCTGAATACAGAGGCGTAATCTTAGGACTAAGATATGCTCTTGAGAAAGGTTTCAAACACATTAAAGTCAAGGGCGATTCGAAACTTGTCTGCAT</genome_strand>
        <mrna_strand>ATATAGTAATAATACGTAGACCGTACATTGTTCTCTGAGTCTTCAAATCGTTGAGGAAATTGGGCACTTGTAGTTGTTGTTTCGTTTCGTCTTTTGCTAAAACTTATGATTGTGTTGATACAGTGCTGGAGTTACTTGCAAAGTCAAGTCGAAACGTTGGAGTTGGAAACATAAAATGGGGGACGAGAAGGATGCGTTCTATGTCGTGCGCAAAGGGGATGTGATCGGGGTTTATAAGAACTTGAGCGATTTGCAAGCTTTGCTACGAACATCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACCCGGCTCTTCAAAAGATAAAATTGTGGGGAAGAATGTTCAGGAAAAGAGGATGCAG.............................................................................................................................................................................................................................................................................................................................................................ATGGAGTTGGTGGCATCTCCTTCATTTGCAGCTGCTGGTCAGCAAAAACTTGCTAAATTGGACAATTTCCTAGAAGCTCCCCCAATTTCGTCATATCCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTCATGCATCCTTGAGTTTGATGGGGCTTCAAAGTGGAATCCTGGTCTAGCTGGTGCTGGGGCTGTGCTGCGTGCTGCAGATGGAAGTATG................................................................................GTTTTCCGGCTGCGTGAAGGTGTAGGTGTGGCAACTAACAATGTTGCTGNATACAGAGGCGTAATCTTAGGACTAANATATGCTCTTGAGAAAGGTTTCAAACACATTAAAGTCANGGGCGATTCGAAACTTGTCTGCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U602385" ref_strand="+" ref_description="SGN-U602385 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>cgattcgaaacttgtctgcatgcaggtcttctttctctacttcttacagctgttttttttagttttattcatttttaatttgcttttagtaaattagtcaatttttctgctttctcactttaaatatcctgtcaaatttgtatatcttcagtaatttattgaaatcactgatttctaaaacaattgctgaagagtcttttcaattgagtgtcagagacatattcattgaactgggctacaccaacagaaagtggaccgttcaatataaggagacacatggtttttaaccaactagtttttggacatgtacatcccaaattaactagaatatgattttgcataatcacataaaattattgaaaaatatttttgagtaacaaaacacacattaattaagattcatgaatgtgattcttcatttgggacttcatggttgagcccccctcccccccccccccccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0014P22.2" temp_strand="+" temp_description="C02SLm0014P22.2  AC215471.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0014P22 sequenced_by:kribb upload_account_name:korea">
        <position start="19594" stop="20654"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19894" g_stop="20354" g_length="461"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="461" r_length="461" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0014P22.2" gen_strand="+" ref_id="SGN-U602385" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>461</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0014P22.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U602385" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19894" e_stop="20354"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGATTCGAAACTTGTCTGCATGCAGGTCTTCTTTCTCTACTTCTTACAGCTGTTTTTTTTAGTTTTATTCATTTTTAATTTGCTTTTAGTAAATTAGTCAATTTTTCTGCTTTCTCACTTTAAATATCCTGTCAAATTTGTATATCTTCAGTAATTTATTGAAATCACTGATTTCTAAAACAATTGCTGAAGAGTCTTTTCAATTGAGTGTCAGAGACATATTCATTGAACTGGGCTACACCAACAGAAAGTGGACCGTTCAATATAAGGAGACACATGGTTTTTAACCAACTAGTTTTTGGACATGTACATCCCAAATTAACTAGAATATGATTTTGCATAATCACATAAAATTATTGAAAAATATTTTTGAGTAACAAAACACACATTAATTAAGATTCATGAATGTGATTCTTCATTTGGGACTTCATGGTTGAGCCCCCCTCCCCCCCCCCCCCCCC</genome_strand>
        <mrna_strand>CGATTCGAAACTTGTCTGCATGCAGGTCTTCTTTCTCTACTTCTTACAGCTGTTTTTTTTAGTTTTATTCATTTTTAATTTGCTTTTAGTAAATTAGTCAATTTTTCTGCTTTCTCACTTTAAATATCCTGTCAAATTTGTATATCTTCAGTAATTTATTGAAATCACTGATTTCTAAAACAATTGCTGAAGAGTCTTTTCAATTGAGTGTCAGAGACATATTCATTGAACTGGGCTACACCAACAGAAAGTGGACCGTTCAATATAAGGAGACACATGGTTTTTAACCAACTAGTTTTTGGACATGTACATCCCAAATTAACTAGAATATGATTTTGCATAATCACATAAAATTATTGAAAAATATTTTTGAGTAACAAAACACACATTAATTAAGATTCATGAATGTGATTCTTCATTTGGGACTTCATGGTTGAGCCCCCCTCCCCCCCCCCCCCCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U567594" ref_strand="+" ref_description="SGN-U567594 Tomato 200607#2 [10 ESTs aligned] (*GB) gi|157345523|emb|CAO14821.1| (e_value=3e-83) unnamed; (*ATH) AT3G01410.1 (e_value=2e-78) | Symbol: None | RNase H domain-containing protein, low similarity to GAG-POL precursor (Oryza sativa (japonica cultivar-group)) GI:5902445; contains Pfam profile: PF00075 RNase H | chr3:153446-155606 REVERSE | Aliases: T13O15.5, T13O15_5; (*SWP) sp|P64955|Y2228_MYCTU (e_value=2e-18) Uncharacterized protein Rv2228c/MT2287 OS=Mycobacterium tuberculosis GN=Rv2228c; ">
      <seq>gcaagtcccaactactcccttcactctcttcctctgctcgtggtggagtaacttgcaaagccaagtaaacgcgttggagttggacacataaatgggggacgaaaaggatgctttttatgtcgtgcataaaggggatgtgatcgctgtctataagaacctcagtgatttacaagctctgctacgatcttctgttggtgaaccagctataagtgtttataaagggtatcacctggctaagcaatcagaagagtatttggcatctcatggactcaaaaatgcaatgtattctatggatttcagtgatgttcgagatgatctctttgggatactcgtcccatgcccttttcggcaacctggctcttcgaaagataaaattatggggaagaatcttccggagaagaggatgcagatggaggtggttgcatctccttcgttttcagccgctggtcagcaaaaacatgccacattagacaattgcctagaaattcccccgatttcgtcatattgtcccccctacatacagtgttcatgcattcttgagtttgatggggcttcaaaggggaatcctggaccagctggtgctggtgccgtgctgcgtgctgcagatggaagtatggttttccggttgcgtgaaggtgtgggtgtggcaactaacaacgttgctgaatatagaggtgtaatcttagggctaaaatatgctcttgagaaaggtttcaaacatgtaaaagttaagggtgactcaaaactcgtctgcatgcagactcaaggaatctggaaatgcaagaaccagaacatggctgagctatccaagattgtgaaagagcttaaagatcattttgtatcattccagatcacccatatttacagagaattcaacactgaagctgatgcccaggcaaatttagccgtgtatcttaagagtggtgaatttcaagtggaatgtgacaagaaaacaacttaatattgtgaagtcaccaactaccccaacttgcttgggggattttgtgaaggatgaatgacactcaagaccgatgcataatggaccttctctggtattagtttttttttttgtagatatataatctgaatcatctggattagagaaacttctgtttaggggcctgctcgaatccattattctcttctcacttgcaatggaaattaattagttctctaaagctaactattctagccccctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0014P22.2" temp_strand="+" temp_description="C02SLm0014P22.2  AC215471.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0014P22 sequenced_by:kribb upload_account_name:korea">
        <position start="22319" stop="30093"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22618" g_stop="22657" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="40" r_length="40" r_score="0.975"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="22658" i_stop="22947" i_length="290">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="22948" g_stop="23097" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="41" r_stop="190" r_length="150" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="23098" i_stop="23318" i_length="221">
            <donor d_prob="0.893" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="23319" g_stop="23477" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="191" r_stop="349" r_length="159" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="23478" i_stop="25291" i_length="1814">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="25292" g_stop="25351" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="350" r_stop="409" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="25352" i_stop="25947" i_length="596">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="25948" g_stop="26046" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="410" r_stop="508" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="26047" i_stop="27349" i_length="1303">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.767" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="27350" g_stop="27457" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="509" r_stop="616" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="27458" i_stop="27536" i_length="79">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="27537" g_stop="27680" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="617" r_stop="760" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="27681" i_stop="28858" i_length="1178">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="28859" g_stop="28966" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="761" r_stop="868" r_length="108" r_score="0.991"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="28967" i_stop="29395" i_length="429">
            <donor d_prob="0.740" d_score="0.98"/>
            <acceptor a_prob="0.917" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="29396" g_stop="29447" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="869" r_stop="920" r_length="52" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="29448" i_stop="29514" i_length="67">
            <donor d_prob="0.616" d_score="1.00"/>
            <acceptor a_prob="0.849" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="29515" g_stop="29793" g_length="279"/>
          <reference_exon_boundary r_type="cDNA" r_start="921" r_stop="1199" r_length="279" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0014P22.2" gen_strand="+" ref_id="SGN-U567594" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>1199</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0014P22.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U567594" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22618" e_stop="22657"/>
          <exon e_start="22948" e_stop="23097"/>
          <exon e_start="23319" e_stop="23477"/>
          <exon e_start="25292" e_stop="25351"/>
          <exon e_start="25948" e_stop="26046"/>
          <exon e_start="27350" e_stop="27457"/>
          <exon e_start="27537" e_stop="27680"/>
          <exon e_start="28859" e_stop="28966"/>
          <exon e_start="29396" e_stop="29447"/>
          <exon e_start="29515" e_stop="29793"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAAGTCCCAACTACTCCCTTCACTCTCTTCCTCTGCTCGGTAAGAATCTTCATTGTATTCTTTCACTTTTCTATGTTTTCAGAAATCCTAATTCGTTTATCTTTGTGTCTAAAGTACGATTTTTATTCAATACAAAAAAACCCTAATTGAGATGGTAATTGAGTATCATTGCTACTATATTAACTGCAACTGATCATACATGCAGGGTAATATGTATACTGAAAATTGTTCAGTGAGTTTAGAATGTAGTTTTTTTTTTTTCTGGAACTTGGACTTTAAGTATTTGTTTCTGTGTTTTCACTAAGTAATACTGTGTTGTGTTGATACAGTGGTGGAGTAACTTGCAAAGCCAAGTAAACGCGTTGGAGTTGGACACATAAATGGGGGACGAAAAGGATGCTTTTTATGTCGTGCATAAAGGGGATGTGATCGCTGTCTATAAGAACCTCAGTGATTTACAAGCTCTGCTACGATCTTCTGTACGTTTCCTTTAATGTTTTTTCTGCTTTTGGGCCTTAGACGGCCTTATCTGTTGGACTACTTTTTTTGGAGTCATGTAGAGCTCAAGTATAAGAAGAGTCTAATTATTACAGCTTTTTAACAATGATGAAGAAATAGAGCTTAGTTGATTTGAGCACAAGTAATAATATTATCAGATGCTCTTTTGATGTATTTTCTATTATTTTCTGTGATCTTTCAGGTTGGTGAACCAGCTATAAGTGTTTATAAAGGGTATCACCTGGCTAAGCAATCAGAAGAGTATTTGGCATCTCATGGACTCAAAAATGCAATGTATTCTATGGATTTCAGTGATGTTCGAGATGATCTCTTTGGGATACTCGTCCCATGCCCTTTTCGGGTTAGAAAGTTTATCATTTTATTATTATTGAACTGGTGGTAGATGTAGTTGTTTAATCTATTTGACAATTTTGTCTTAACTGTTTAATAATAGCTGGGTCAAATTTTGGTTAATGTGGATGCTAAAATTTGTCCGGCATTTAAGTTTCATACCCATCCTTCTGTTATCATGATCTAGACCCAGTAGTGTGCTGCAACCTTGACTGACTGCATGATTGTTCGCGATCAGGCTGAACTAATCCTTCTCTTGATCTTCCAACTATGTTATCGGCAATTGAGTAGGATCAATTCTCCAATTAGTGACCTTTTACTGGAAACGGAGTGGTAGTGATTACCAGTCGTATCTACTCCATTTAGTGACTAGCAGTTGTATCTACTCCATTTAGTGAGTTTTTATGTCTTTAGGTGTATGTCTTTTGCGTAGCTTTGATATCTTCTTTTGCGTGGCGCTGGTGCTTCCGTGTAGCTCCTTTTTCTAAAGAAAATGGACAAATATTGAATGCAACTGTTATTTACCGCTTTGACATGATATCCATCTCATTTTTCCTCTTTGAAGCACTTTCATCTGATTGTTGAGATAAGAGATAGCTCTTCAGCGCTCTCTATTGTCTTTTCCTTCCAATTTGTCTCATGACACATCATTTTGGCGCTGCAGAAATGGTTTTGAGCTCATGAGATTAATTTTTCCTATGTAGCATAGGTTCTAAATAATAAAGTGCCCTTGTGTTTTGGAAGAGCAAAATATCGCTCCATCTTAGACCATCATAATAGGACAATCATTACTGGAAGAATTACTCTGGGATGATGTGTCTTTATATCTTTGCTTATACAGTTTTTATTGAATTCATAGCTGAGGCCCATATTTGGTAGAGATTCTGATTTTTTTTTTAACTAAAATATATTTAGGTATATAGAAAATAAAATTAATATTGTTTTGCTAGCATTGATTCTTTAATGGTGATTTTTGAATGGATGACACATAAAATTGATGTCATTGGATAATTTTGTACCACCAGCAGATGCATGAGAAAGGAAGTGAATATTTACTTAGATTTGTATGTATTGAAATATAGAAATTGAAAGATGTAGGACTGGAACTGGGAAGAAATCATTTATTTTTGCATTAGATGAATAAATACTGTTTCAAAGCTAAAAAAAACGATGAATACTATTGAAAAGCTTAATGTGAATAAACTGCTGTTTTTTTTAAAAAAATCTTAAGTGTTTTTCCGATTATGTGGTGCGTGGTAGCATTTCAAAGAGAAAATGTCATACATGCCTACTTTTTGTGGCGCATACTTCTTTTTGATAATGCTACTGCCATATGTTATATTGCTTCAAGGCTAATTTGGTTCATGGGTGGAAAGGGGTCATATATGTCTCTGACGCAGAACTGACTACTGTTACTTGTGGTCACACAAACTTGTCAAGTAGCCTTACATATGATATTCTTGGGATCCAATTTGATATCTTTGATAGGTTAATTCACTTGGTTGATTTGTTAGTTTTTCCTCGCTTTGTCATTGCCATGACACTACTTCCTCTATTGTGTCTTGCGACCACTGACTGGTAATTAAAGAGTGCACATAATACTGCTTGTACATTTTTCAGCTATACCTACTTGAAAAACTTAGATGTTTTAACATTCAATTATTGATATGTTTGTTCCCGTTTGCTCTGTCAAATTCAGCAGTCTATGGTTTATAATTGTGCCTTGAAGAAAACCAAACTTTCAGCATGTTTTCTAGTAACAATTTTACATTAAAGACGATATCATGCATGCTGATTTTTCATTTTTTTTTTCTGTTTTTGTAGCAACCTGGCTCTTCGAAAGATAAAATTATGGGGAAGAATCTTCCGGAGAAGAGGATGCAGGTAATTTCTTAATGGTCAATCCAGATTATTCTTACATTGATAGGATGGGGTATGTCTTTCTTGAAAGGTTCATAACAGTTATACTTTCTTTATGCCCAACTTCAGTCATCAAAAAAACTATATCATCAGTTACTACAATGCCCTAACATGTTGTGAAGTAGGATGGCATGGAAATTTCGGATGGTGTTTATTATTAGGCTTGTGCTTTTCCTGGAATAAGAAACTAATTGTCTGGTCTAGGGATGGCGGTTTCCTCTATAGCTCTTGAAGTAAAATGAGGATACTCATCTAGTGGTGGTATAAATGTCAAGGATAAGCCTGTTTGCTGCATGTAGTTGCTCTAATAACGAAGTTGTGCTTCACATTTATAGTTTCTAGTATAAAACTGATTTATTGTCCTAAGAACTCAATTTTGTCGATGGTTCAACTCACAGGTTTTAGTTAATCTTGTCTCGCCTTATGATAATTTGTTCGGTCCTCTATTTTGTTTAATATACTTTTCTAATTTAATTGAGTCAGCATGTGAAAGTCTTCCTATTATGAAAAGGTGTGTGTAGTGTATTTGATATTCACATGATTATTTTTCTTACATTCAGATGGAGGTGGTTGCATCTCCTTCGTTTTCAGCCGCTGGTCAGCAAAAACATGCCACATTAGACAATTGCCTAGAAATTCCCCCGATTTCGTCATATTGTGTAAGTATATTATTTTACCTAACAATTCTTTGTATCAATACGTTTAAATTCTTGTCATTGTCTGCTTTATCTGGATGTTGACATTCTTGGGGTGGGGTGAGGGTGGTGATTTGGTGGGTGGTTAGCCTTGGAAAGGGCTTGCTCCTATGTTTTGACTTTATTCTGCTGCTGGCCGAAACTAGTGAGGATAGTGATGCGTATTGGAGCTGATTTGGAAAATAAAAGGTTGAGAAGTCCTGATTCGGCAACCACTGATCCAAGGGGGACCAAGTGATTCTTAAATCAAACTGTAAGGGCAAAGTGGAACATTGTTGGTTAACGTTGCGCAAAAGTCCAAAGTTGGAAGATGGTGACAAAATTTATATGTAATCTATGTTGCTGGGATTCTCCAAGAAATAGTGCTGCACCCATGCTAGATCCTCCAAAATGCACTACTTTTGAAGGATTCGACATGCTCTCATCAACATTTTAGAGTCCGAGCAACATAACTTGTATTAAGTTTATTTTAGAATGTAAGGGGTCGTTTGGTACAAAAATTAATGACACACTGATTAGTAATGCAAGGATTACTAATGCAGGGGTAAGTAGGGGTTAGTAGTGCAGGAATATGTAATGCAGGGTTTACTTTTACCAAATGTTTGGCTCATTGTTTCCTACCCCATCTTGTGTTTGGATTAAAACTCTATAAGAAGTTTTTTTCCAATTATACCCTTGAATTATTATGCAATTGGGTCAAGAAAGATAATTCCCTGCAGTCTTTTGTAACTTCTGGTTTTGGTACCTTTTTGGTACTTTAGGCAATAAACCTTTACCTTATAAACAAAAAAAAAATATTTTTCTATGGCTCCCTAACTTGCTAGGGGTTGAACAATTTTGTTGTCATGTTTGCTATTTTTTCTCTTGAATTATTTAAGGATAACTAGTTGTCATATTAATGAATTGATCACTCACAAAATGTCAATTTTCAATTTAAAAAAGATAAACCCCATCTACTTTTAAAACGAAAAGACGGTAAACAATAAGAAAATTAAATAAATCATCTACATTTATATATATATATATATATATATATATATATATACACACACACACACACATAGATGATTGAAGAAACAGCGTAAAAGAATCTATTTGGACTTTGTTCTTATGTGCTAAAAAAAGAAAAAAAGGTTCCCGTTAAACTTATCTTTTGAGACATTTTGTAGTGTATCGGCACTTCAGTTCCAAGTCGATATCATTCTACTATCTGTATGTGATCTTTGCTTCTAACTTGGAGGAACATTTTGTAACTTGATACCTTCAGCCCCCCTACATACAGTGTTCATGCATTCTTGAGTTTGATGGGGCTTCAAAGGGGAATCCTGGACCAGCTGGTGCTGGTGCCGTGCTGCGTGCTGCAGATGGAAGTATGGTATGCTCCCTTTCCATTTAGGAGATGTGGTTTGTCACCATAAATTTACAGGTTTTCGACTTGTAGTTCTTTTCTGTAGGTTTTCCGGTTGCGTGAAGGTGTGGGTGTGGCAACTAACAACGTTGCTGAATATAGAGGTGTAATCTTAGGGCTAAAATATGCTCTTGAGAAAGGTTTCAAACATGTAAAAGTTAAGGGTGACTCAAAACTCGTCTGCATGCAGGTCTTCTTTACTCTTCTTACTTCTGTTTTTGTTTTATCTTGATCTTCCCTTAAGCAAATTAGTCAATTATTTCTGCTTTTCCACTTTTAATATCCTGTCAGATTTATATATTCCAGTAACTTGTTGAAACAACTGAGTTCTAAAGCAATTGCTGAAGAACTTTTTCCGCTGATGTCCTAGCAATTAAGAGTGTCTGAGACATACTTATAAACCCCAGGCTACACAAAGATGCCCCAGAAAGTAGACCATTCCAAATAATGATAAAGTTGATCTCTGTTTATGGACTATGGTATTAAGTATTATCATCTTAAGTCATCCCTAGTTAGCCTGGGATGGAATAGCCGAAGTATTATCTTTAGTGTATACTCCACAGGTTGTATATGTATACTCCAAAATCACACAGTGGAATCCACACTGTGGATAACATGACTGGGTATGTTAGGGAGTACTAGATAGTTTAGAAGTGCACTCGAATAAGGTGAACTACAAAAACTAATTTGAGTTTATTATTATGTAATTCTGCATATAACTTTTTTCTTTTTATGAGGCAAAGTCGGTTCAGCTACATAAATCTAGAAATCAATTAATACTATATTACATTCAACACTTGACAGTGTTTTAAGAAAAGAAGAGAGAGAAATGATCCAAGGAAGCTTTTAAAAAGAAATGGGAAAAGCTAAGCATTATCCACCAAGTTTTGAATTGTGTCTCATTGATCCTCGGGGATTTCTGTTATATTAAAAAATGACAGAGCTAAGAGATGATGTGGCATAGAAGAATGAGCAGCAGTAGGCAAGCAGTTTGGATCCCCACATTGTCTTCGGAAAAATTGCTTCTGTTCATCCCAAAGTGAGCTGGAGAATAAAGGTATAGGTTAATTTGATTGTTTTGCAGAATGCCTAAGAGATTTTGCAGTGACAGATCTGGGAATGAGTATAAAAACCTTATATGATTCGGTATAAGCTTCCTTCTTGATGGCACCTTGCCCCTTCCATTCTAAGAGACACCCAAACCAGTTCAAAAGTGTAGCTATTCTTGCCCTTGTAACCTGTGTGACCTTATTCTGGGATCATGTGTTCTTGCGGTGCTATTTATATTGCATTAAGTATTAAGTTATTGCTGGAACTGCTTCAGGGATGATCTCTCATTCTTTAATTTTTTTTTTAATCATGGAACAGACTCAAGGAATCTGGAAATGCAAGAACCAGAACATGGCTGAGCTATCCAAGATTGTGAAAGAGCTTAAAGATCATTTTGTATCATTCCAGATCAACCATATTTACAGAGTATGGCCAACTTTCTCCTCTTTTGCTAATTCAGAGCTTACTGAGCCTGTCTATCAGAATTTTGATCTTTGAAGTCCTTATTATATCTTGCATCTGCATCTTATTTCTGTGGTGAAAATGCTATAGTGTGTGTTATGTGTGGTCTCCTGTGACCAGAAAAGGTGCAAGTGGTGGGTGCTTGAATGTCATGTTTAATTTATGCAACAATGAGTTTCATCCATCTTGCTTATGAGCTCTATGAAATTGGTTTCATCACCTTGTTGCTAGAAGTGAATAGTCATGTTTGTCCGGTCTATTAATTCACTTAGTTTCGCATTTCTCTTCGTGAAACGTTTAAACTAAACTTGTACATATGTACTAAACTCATGATTGTTTAAAAAGCCATCTTCTCATCTCATTCTGAGGGGTTTTACTTGTTTGACATATCAGGAATTCAACACTGAAGCTGATGCCCAGGCAAATTTAGCCGTGTATCTTAAGAGTAAGGGTCTTTCTTTTGGTAGTTACATACATCTCTCTTTCCCGGTGATAAGAAAAATTTCTTGCAGGTGGTGAATTTCAAGTGGAATGTGACAAGAAAACAACTTAATATTGTGAAGTCACCAACTACCCCAACTTGCTTGGGGGATTTTGTGAAGGATGAATGACACTCAAGACCGATGCATAATGGATCTTCTCTGGTCTTGTTTTTTTTTTTTGTAGATATATAATCTGAATCATCTGGATTAGAGAAACTTCTGTTTAGGGGCCTGCTCGAATCCATTATTCTCTTCTCACTTGCAATGGAAATTAATTAGTTCTCTAAAGCTAACTATTCTAGCACTTTG</genome_strand>
        <mrna_strand>GCAAGTCCCAACTACTCCCTTCACTCTCTTCCTCTGCTCG..................................................................................................................................................................................................................................................................................................TGGTGGAGTAACTTGCAAAGCCAAGTAAACGCGTTGGAGTTGGACACATAAATGGGGGACGAAAAGGATGCTTTTTATGTCGTGCATAAAGGGGATGTGATCGCTGTCTATAAGAACCTCAGTGATTTACAAGCTCTGCTACGATCTTCT.............................................................................................................................................................................................................................GTTGGTGAACCAGCTATAAGTGTTTATAAAGGGTATCACCTGGCTAAGCAATCAGAAGAGTATTTGGCATCTCATGGACTCAAAAATGCAATGTATTCTATGGATTTCAGTGATGTTCGAGATGATCTCTTTGGGATACTCGTCCCATGCCCTTTTCGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACCTGGCTCTTCGAAAGATAAAATTATGGGGAAGAATCTTCCGGAGAAGAGGATGCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAGGTGGTTGCATCTCCTTCGTTTTCAGCCGCTGGTCAGCAAAAACATGCCACATTAGACAATTGCCTAGAAATTCCCCCGATTTCGTCATATTGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCCCCTACATACAGTGTTCATGCATTCTTGAGTTTGATGGGGCTTCAAAGGGGAATCCTGGACCAGCTGGTGCTGGTGCCGTGCTGCGTGCTGCAGATGGAAGTATG...............................................................................GTTTTCCGGTTGCGTGAAGGTGTGGGTGTGGCAACTAACAACGTTGCTGAATATAGAGGTGTAATCTTAGGGCTAAAATATGCTCTTGAGAAAGGTTTCAAACATGTAAAAGTTAAGGGTGACTCAAAACTCGTCTGCATGCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCAAGGAATCTGGAAATGCAAGAACCAGAACATGGCTGAGCTATCCAAGATTGTGAAAGAGCTTAAAGATCATTTTGTATCATTCCAGATCACCCATATTTACAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................GAATTCAACACTGAAGCTGATGCCCAGGCAAATTTAGCCGTGTATCTTAAGA...................................................................GTGGTGAATTTCAAGTGGAATGTGACAAGAAAACAACTTAATATTGTGAAGTCACCAACTACCCCAACTTGCTTGGGGGATTTTGTGAAGGATGAATGACACTCAAGACCGATGCATAATGGACCTTCTCTGGTATTAGTTTTTTTTTTTGTAGATATATAATCTGAATCATCTGGATTAGAGAAACTTCTGTTTAGGGGCCTGCTCGAATCCATTATTCTCTTCTCACTTGCAATGGAAATTAATTAGTTCTCTAAAGCTAACTATTCTAGCCCCCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U602874" ref_strand="+" ref_description="SGN-U602874 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>gattttacctaacaattctttgtatcaatacgtttaaattcttgtcattgtctgctttatctggatgttgacattcttggggtggggtgagggtggtgatttggtgggtggttagccttggaaagggcttgctcctatgttttgactttattctgctgctggccgaaactagtgaggatagtgatgcgtattggagctgatttggaaaataaaaggttgagaagtcctgattcggcaaccactgatccaagggggaccaagtgattcttaaatcaaactgtaagggcaaagtggaacattgttggttaacgttgcgcaaaagtccaaagttggaagatggtgacaaaatttatatgtaatctatgttgctgggattctccaagaaatagtgctgcacccatgctagatcctccaaaatgcactacttttgaaggattcgacatgctctcatcaacattttagagtccgagcaacataacttgtattaagtttattttagaatgtaaggggtcgtttggtacaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0014P22.2" temp_strand="+" temp_description="C02SLm0014P22.2  AC215471.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0014P22 sequenced_by:kribb upload_account_name:korea">
        <position start="25758" stop="26881"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26057" g_stop="26581" g_length="525"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="525" r_length="525" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0014P22.2" gen_strand="+" ref_id="SGN-U602874" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>525</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0014P22.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U602874" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26057" e_stop="26581"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATTTTACCTAACAATTCTTTGTATCAATACGTTTAAATTCTTGTCATTGTCTGCTTTATCTGGATGTTGACATTCTTGGGGTGGGGTGAGGGTGGTGATTTGGTGGGTGGTTAGCCTTGGAAAGGGCTTGCTCCTATGTTTTGACTTTATTCTGCTGCTGGCCGAAACTAGTGAGGATAGTGATGCGTATTGGAGCTGATTTGGAAAATAAAAGGTTGAGAAGTCCTGATTCGGCAACCACTGATCCAAGGGGGACCAAGTGATTCTTAAATCAAACTGTAAGGGCAAAGTGGAACATTGTTGGTTAACGTTGCGCAAAAGTCCAAAGTTGGAAGATGGTGACAAAATTTATATGTAATCTATGTTGCTGGGATTCTCCAAGAAATAGTGCTGCACCCATGCTAGATCCTCCAAAATGCACTACTTTTGAAGGATTCGACATGCTCTCATCAACATTTTAGAGTCCGAGCAACATAACTTGTATTAAGTTTATTTTAGAATGTAAGGGGTCGTTTGGTACAAAA</genome_strand>
        <mrna_strand>GATTTTACCTAACAATTCTTTGTATCAATACGTTTAAATTCTTGTCATTGTCTGCTTTATCTGGATGTTGACATTCTTGGGGTGGGGTGAGGGTGGTGATTTGGTGGGTGGTTAGCCTTGGAAAGGGCTTGCTCCTATGTTTTGACTTTATTCTGCTGCTGGCCGAAACTAGTGAGGATAGTGATGCGTATTGGAGCTGATTTGGAAAATAAAAGGTTGAGAAGTCCTGATTCGGCAACCACTGATCCAAGGGGGACCAAGTGATTCTTAAATCAAACTGTAAGGGCAAAGTGGAACATTGTTGGTTAACGTTGCGCAAAAGTCCAAAGTTGGAAGATGGTGACAAAATTTATATGTAATCTATGTTGCTGGGATTCTCCAAGAAATAGTGCTGCACCCATGCTAGATCCTCCAAAATGCACTACTTTTGAAGGATTCGACATGCTCTCATCAACATTTTAGAGTCCGAGCAACATAACTTGTATTAAGTTTATTTTAGAATGTAAGGGGTCGTTTGGTACAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U576181" ref_strand="+" ref_description="SGN-U576181 Tomato 200607#2 [17 ESTs aligned] (*GB) gi|157345524|emb|CAO14822.1| (e_value=2e-31) unnamed; (*ATH) AT5G14910.1 (e_value=9e-30) | Symbol: None | heavy-metal-associated domain-containing protein, Pfam profile PF00403: Heavy-metal-associated domain | chr5:4823717-4825373 FORWARD | Aliases: F2G14.30, F2G14_30; ">
      <seq>ggttccttccatttgtaatctggcttctggataagagtgaaaaatcactctgaggaatttgcgtcggaaaaaaaaaatatggcgaccgtctcagcattttccgtttgtagagccaaatctcattctcgaattccccattcttcatctaatgcaattccccagcttttcccaatgcaatttcttcggtgtcaaagcaacaggagcattggcggtggttattcttgctcttcaagttcggtgaaagcgaaggtacctttgagaactaccaggatatgttctgcaactgaggaagatggtgctactgctgttgccgaagaagaatctgctgctcccactacatctgatcaaactgtttctgtttccgtctccccttccgacgttctaactatgttctttcaggcagaaggaacaatgaatgaagctgctattccttccgtgactaactctttagaggatattgaaggcattacaggtctcaaaattcaagttgtcgagggcattgcaagtgtcgagttaacaaagcaaacgacaatacaagctacaggggtggcttcaagtttggttgaaacaatacaaggttcaggcttcaagttgcaaacattgaatctgagctttcaggatgaagaagatattagctaagtggtggcttgtagaattcagagacatgataggctgatatctttcacgggcatcctgagagatctctgtttatttgtatgccagtagtttcagtaagcctatatctgtaacatttttgtgttatgcagttctttgatctttttcttccttagcatatgttcctttccgcaacttataaaaatacttgtgaattactaatgatcagcagaatcattttgtttacttgttgaaacaagtggtatacgattggaaaaagtacttcttatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0014P22.2" temp_strand="+" temp_description="C02SLm0014P22.2  AC215471.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0014P22 sequenced_by:kribb upload_account_name:korea">
        <position start="29924" stop="33640"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30224" g_stop="30622" g_length="399"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="399" r_length="399" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30623" i_stop="31320" i_length="698">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31321" g_stop="31374" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="400" r_stop="453" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="31375" i_stop="31930" i_length="556">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31931" g_stop="31990" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="454" r_stop="513" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="31991" i_stop="32947" i_length="957">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="32948" g_stop="33340" g_length="393"/>
          <reference_exon_boundary r_type="cDNA" r_start="514" r_stop="906" r_length="393" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0014P22.2" gen_strand="+" ref_id="SGN-U576181" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>906</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0014P22.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U576181" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30224" e_stop="30622"/>
          <exon e_start="31321" e_stop="31374"/>
          <exon e_start="31931" e_stop="31990"/>
          <exon e_start="32948" e_stop="33340"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTTCCTTCCATTTGTAATCTGGCTTCTGGATAAGAGTGAAAAATCACTCTGAGGAATTTGCGTCGGAAAAAAAAAATATGGCGACCGTCTCAGCATTTTCCGTTTGTAGAGCCAAATCTCATTCTCGAATTCCCCATTCTTCATCTAATGCAATTCCCCAGCTTTTCCCAATGCAATTTCTTCGGTGTCAAAGCAACAGGAGCATTGGCGGTGGTTATTCTTGCTCTTCAAGTTCGGTGAAAGCGAAGGTACCTTTGAGAACTACCAGGATATGTTCTGCAACTGAGGAAGATGGTGCTACTGCTGTTGCCGAAGAAGAATCTGCTGCTCCCACTACATCTGATCAAACTGTTTCTGTTTCCGTCTCCCCTTCCGACGTTCTAACTATGTTCTTTCAGGTTAACCCCTTCTTTTCTATTTTGGTAAAGTTTCTAGTTTTTTCATTAAAGAACTCAACCAATGTGAACCCGAAAGGGTTGCTGTAGGTTAATAACTAGTGTAGGAATAGTTAATTGTGGTTGTAATGAATTTCAGTGGTTTGAACTTGGTTCTTGTGAAGTTTCTAATATTGTCAAAAAAATCAACCAGTGTGAATTTCTGATTAAAGTGAAGAGGGTTGCAGTAGGTTAATGCCTAGTGTGTACGAATAGTTTATCTGGTAGTAATGAATTTCAGTCTGTGCTCATATTGGTATGAAATGGGTTCTTGTGAGGTGAATTTTATCCAAAAATTCTAAGTAAGTGAATTCGCTAAGTTAGGATAATGGAGGAGGAGGAGGTTAATTCTCAGTGTAAGGCTGTAAGCATAGTAAATTTATTAAGAATTCTGATAGTACTGGTATTTGATAGTGCTTGCTCATATTGGACTATTGGAGTGAAATGGGTCGGATAAGAACGCATATACAGGATTGGTATAGCCCAACTCCAACTAGTTTGGCAGTGAGGTTTAGTTAATTTATTGATTGATTGTCTGATTAGTGCTCAATGTGCTAGTTTTGCTTTATTTTTCTTTCAAATTGTTAGTTGTCTGTAACCCTTAAACTTCTTGTGGATTCTTCTGTGAATGGTAAACTGAACTTATACCTTTCTTATCACAGGCAGAAGGAACAATGAATGAAGCTGCTATTCCTTCCGTGACTAACTCTTTAGAGGTAAATTGAGTGTGTAAAATTCAAAGCTTCTTCTGGTACATGCTAATTTGTTGACACTTCACAAAACACATTACTTGTCTGCTGCATTTGAGATACAATGTAGTAGCAGTTGCAGGGACTCTGAGTTTTTATTTTTCTGTGTAATATTAATGCTACTTGTGAATCACCAGAAGACTCGCTATTACATTGAAGAGTGAAATAAACAACACAGGTTGTTTACACTTTAAAGGACAAATTAAAGAAAGGAAAACGTTCTGATCTTTCTGAGGGATTTAAACTCTTTTTTTCTTGGAACTAGGCATATCTGAGATCTTATAATCTAGAATCAAAGAATCAGATACAGATATTCATCTGATTCTAGTTTTTCAGAAGCTGCAAGAGAGAACTATTGATTTTGTGAATGTTTGATGGAGAGCTATATCTCTTTCTCCACCTCTATCAAAACATCAGATTTTAGCTAATAATTGGAATTGAAGAATAATTGCAGGTTGCCCTAATTAAAAAAGAAAACAAGTAGTTGTAGTTTGACCTTTATCGTCTGTCCATATGTATACAGGATATTGAAGGCATTACAGGTCTCAAAATTCAAGTTGTCGAGGGCATTGCAAGTGTCGAGGTGATTCACATATATAATGCTTCTCTTACATTGACTTATTAGCCTATTCTGTTACAGGAAATTTCTTTGTAGAAAGTTTACAGCTCAATCAGCATAATGCACCTTAGAGATATATTAAAGTACTAAATTCTGAAGCATGCTTTAGGTTCCTTGTAGTTTCCTACATTCAATATGCAATATAGTGGACAACTTCCAGGTGGACTATCTTGTGCTGCCTTTTTGTGTTTGGAGTTTCTCTATAAATGATAGGAACAGTCTATCTAAATGAACGATATCCTTTAACTTTTCATGGTGAGGGAAAAATAAACTTTTAGTTCTTCAAAAGTAACCTAAAAAATTATTATTTGTGAAAAGAAGGCTGTTTAAGTACTTATTACATTTTAATCTTTAAAATATTCTGTAGAAAATCTAACAGTGTCAAAGCGCTATCCTTTGAAGTTTCTATTTCCCCTAGCATACAAATAACCTCAAATCCCAAAAAGTGTAAGAATTTCATTTACATAGATCAAGCATATAAAATTGGAAAGTAAAGTTGCCATCTATTTCCATCAGGATTCAATTCTGAGTTCCTTATTTCAGCTTATTGCCTGATCTGCATATTAGTATCCTTGGTGGCATGTAAGTGTCTAGGATCTTGATCATCTAATTGTGCATCCAATATAAGACCTTAGGAAATTGATGAGATTAGGGCTAAAGGTAAGAAAGAACTCCCAGTGTTGTCCTAAATTAGGAGAAATCACCTTCCCTTCTTATGAATAGAGAACGAGAGAGAACCATTATTGTGGTGAAAATTTTCCTCTAAACTTACTGTTACCTAAGAATATAAGAAGCATTTAAGGACATATCAGATGTCTCTATTTTCTTCATTCAGAACTTCAATAAGGCATTTGAAGAACCAAGAAATGAAACATGGTATGTCCTTGGTTCAGTGTTAACCTCTCTTTTTATTTGATGTAGTTAACAAAGCAAACGACAATACAAGCTACAGGGGTGGCTTCAAGTTTGGTTGAAACAATACAAGGTTCAGGCTTCAAGTTGCAAACATTGAATCTGAGCTTTCAGGATGAAGAAGATATTAGCTAAGTGGTGGCTTGTAGAATTCAGAGACATGATAGGCTGATATCTTTCACGGGCATCCTGAGAGATCTCTGTTTATTTGTATGCCAGTAGTTTCAGTAAGCCTATATCTGTAACATTTTTGTGTTATGCAGTTCTTTGATCTTTTTCTTCCTTAGCATATGTTCCTTTCCGCAACTTATAAAAATACTTGTGAATTACTAATGATCAGCAGAATCATTTTGTTTACTTGTTGAAACAAGTGGTATACGATTGGAAAAGGTACTTCTTATG</genome_strand>
        <mrna_strand>GGTTCCTTCCATTTGTAATCTGGCTTCTGGATAAGAGTGAAAAATCACTCTGAGGAATTTGCGTCGGAAAAAAAAAATATGGCGACCGTCTCAGCATTTTCCGTTTGTAGAGCCAAATCTCATTCTCGAATTCCCCATTCTTCATCTAATGCAATTCCCCAGCTTTTCCCAATGCAATTTCTTCGGTGTCAAAGCAACAGGAGCATTGGCGGTGGTTATTCTTGCTCTTCAAGTTCGGTGAAAGCGAAGGTACCTTTGAGAACTACCAGGATATGTTCTGCAACTGAGGAAGATGGTGCTACTGCTGTTGCCGAAGAAGAATCTGCTGCTCCCACTACATCTGATCAAACTGTTTCTGTTTCCGTCTCCCCTTCCGACGTTCTAACTATGTTCTTTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGAAGGAACAATGAATGAAGCTGCTATTCCTTCCGTGACTAACTCTTTAGAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATTGAAGGCATTACAGGTCTCAAAATTCAAGTTGTCGAGGGCATTGCAAGTGTCGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAACAAAGCAAACGACAATACAAGCTACAGGGGTGGCTTCAAGTTTGGTTGAAACAATACAAGGTTCAGGCTTCAAGTTGCAAACATTGAATCTGAGCTTTCAGGATGAAGAAGATATTAGCTAAGTGGTGGCTTGTAGAATTCAGAGACATGATAGGCTGATATCTTTCACGGGCATCCTGAGAGATCTCTGTTTATTTGTATGCCAGTAGTTTCAGTAAGCCTATATCTGTAACATTTTTGTGTTATGCAGTTCTTTGATCTTTTTCTTCCTTAGCATATGTTCCTTTCCGCAACTTATAAAAATACTTGTGAATTACTAATGATCAGCAGAATCATTTTGTTTACTTGTTGAAACAAGTGGTATACGATTGGAAAAAGTACTTCTTATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U576182" ref_strand="+" ref_description="SGN-U576182 Tomato 200607#2 [2 ESTs aligned] ">
      <seq>agccaaatctcattctcgaattccccattcttcatctaangcaattccccagcttttcccaatgcaatttcttcggtgtcaaagcaacaggagcattggcggtggttattcttgctcttcaagttcggtgaaagcgaaggtacctttgaaaactaccaggatatgttctgcaactgaggaaaatggtgctactgctgttgccnaaaaaaaatctgctgctcccactacatctgancaaactgtttctgtttccgtctccccttccnacnttctaactatgttctttcaggcanaaggaacaatgaatgaagctgctattccttccgtgactaactctttagaggtaaattgagtgtgtaaaattcaaagcttcttctggtacatgctaatttgttgacacttcacaaaacacattacttgtctgctgcatttgagatacaatgtagtagcagttgcagggactctgagtttttatttttctgtgtaatattaatgctacttgtgaatcaccagaagactcgctattacattgaagagtgaaataaacaacacaggttgtttacactttaaaggacaaattaaagaaaggaaaacgttctgatctttctgagggatttaaactctttttttcttggaactaggcatatctgagatcttataatctagaatcaaagaatcagatacagatattcatctgattctagtttttcagaagctgcaagagagaactattgattttgtgaatgtttgatggagagctatatctctttctccacctctatcaaaacatcagattttagctaataattggaattgaagaataattgcaggttgccctaattaaaaaagaaaacaagtagttgtagtttgacctttatcgtctgtccatatgtatacaggatattgaaggcattacaggtctcaaaattcaagttgtcgaaggcattgcaagtgtcgaggtgattcacatatataatgcttctcttacattgacttattagcctattctgtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0014P22.2" temp_strand="+" temp_description="C02SLm0014P22.2  AC215471.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0014P22 sequenced_by:kribb upload_account_name:korea">
        <position start="30034" stop="32343"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30334" g_stop="30622" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="289" r_length="289" r_score="0.969"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30623" i_stop="31320" i_length="698">
            <donor d_prob="0.995" d_score="0.96"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31321" g_stop="32043" g_length="723"/>
          <reference_exon_boundary r_type="cDNA" r_start="290" r_stop="1012" r_length="723" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0014P22.2" gen_strand="+" ref_id="SGN-U576182" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>1012</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0014P22.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U576182" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30334" e_stop="30622"/>
          <exon e_start="31321" e_stop="32043"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCCAAATCTCATTCTCGAATTCCCCATTCTTCATCTAATGCAATTCCCCAGCTTTTCCCAATGCAATTTCTTCGGTGTCAAAGCAACAGGAGCATTGGCGGTGGTTATTCTTGCTCTTCAAGTTCGGTGAAAGCGAAGGTACCTTTGAGAACTACCAGGATATGTTCTGCAACTGAGGAAGATGGTGCTACTGCTGTTGCCGAAGAAGAATCTGCTGCTCCCACTACATCTGATCAAACTGTTTCTGTTTCCGTCTCCCCTTCCGACGTTCTAACTATGTTCTTTCAGGTTAACCCCTTCTTTTCTATTTTGGTAAAGTTTCTAGTTTTTTCATTAAAGAACTCAACCAATGTGAACCCGAAAGGGTTGCTGTAGGTTAATAACTAGTGTAGGAATAGTTAATTGTGGTTGTAATGAATTTCAGTGGTTTGAACTTGGTTCTTGTGAAGTTTCTAATATTGTCAAAAAAATCAACCAGTGTGAATTTCTGATTAAAGTGAAGAGGGTTGCAGTAGGTTAATGCCTAGTGTGTACGAATAGTTTATCTGGTAGTAATGAATTTCAGTCTGTGCTCATATTGGTATGAAATGGGTTCTTGTGAGGTGAATTTTATCCAAAAATTCTAAGTAAGTGAATTCGCTAAGTTAGGATAATGGAGGAGGAGGAGGTTAATTCTCAGTGTAAGGCTGTAAGCATAGTAAATTTATTAAGAATTCTGATAGTACTGGTATTTGATAGTGCTTGCTCATATTGGACTATTGGAGTGAAATGGGTCGGATAAGAACGCATATACAGGATTGGTATAGCCCAACTCCAACTAGTTTGGCAGTGAGGTTTAGTTAATTTATTGATTGATTGTCTGATTAGTGCTCAATGTGCTAGTTTTGCTTTATTTTTCTTTCAAATTGTTAGTTGTCTGTAACCCTTAAACTTCTTGTGGATTCTTCTGTGAATGGTAAACTGAACTTATACCTTTCTTATCACAGGCAGAAGGAACAATGAATGAAGCTGCTATTCCTTCCGTGACTAACTCTTTAGAGGTAAATTGAGTGTGTAAAATTCAAAGCTTCTTCTGGTACATGCTAATTTGTTGACACTTCACAAAACACATTACTTGTCTGCTGCATTTGAGATACAATGTAGTAGCAGTTGCAGGGACTCTGAGTTTTTATTTTTCTGTGTAATATTAATGCTACTTGTGAATCACCAGAAGACTCGCTATTACATTGAAGAGTGAAATAAACAACACAGGTTGTTTACACTTTAAAGGACAAATTAAAGAAAGGAAAACGTTCTGATCTTTCTGAGGGATTTAAACTCTTTTTTTCTTGGAACTAGGCATATCTGAGATCTTATAATCTAGAATCAAAGAATCAGATACAGATATTCATCTGATTCTAGTTTTTCAGAAGCTGCAAGAGAGAACTATTGATTTTGTGAATGTTTGATGGAGAGCTATATCTCTTTCTCCACCTCTATCAAAACATCAGATTTTAGCTAATAATTGGAATTGAAGAATAATTGCAGGTTGCCCTAATTAAAAAAGAAAACAAGTAGTTGTAGTTTGACCTTTATCGTCTGTCCATATGTATACAGGATATTGAAGGCATTACAGGTCTCAAAATTCAAGTTGTCGAGGGCATTGCAAGTGTCGAGGTGATTCACATATATAATGCTTCTCTTACATTGACTTATTAGCCTATTCTGTT</genome_strand>
        <mrna_strand>AGCCAAATCTCATTCTCGAATTCCCCATTCTTCATCTAANGCAATTCCCCAGCTTTTCCCAATGCAATTTCTTCGGTGTCAAAGCAACAGGAGCATTGGCGGTGGTTATTCTTGCTCTTCAAGTTCGGTGAAAGCGAAGGTACCTTTGAAAACTACCAGGATATGTTCTGCAACTGAGGAAAATGGTGCTACTGCTGTTGCCNAAAAAAAATCTGCTGCTCCCACTACATCTGANCAAACTGTTTCTGTTTCCGTCTCCCCTTCCNACNTTCTAACTATGTTCTTTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCANAAGGAACAATGAATGAAGCTGCTATTCCTTCCGTGACTAACTCTTTAGAGGTAAATTGAGTGTGTAAAATTCAAAGCTTCTTCTGGTACATGCTAATTTGTTGACACTTCACAAAACACATTACTTGTCTGCTGCATTTGAGATACAATGTAGTAGCAGTTGCAGGGACTCTGAGTTTTTATTTTTCTGTGTAATATTAATGCTACTTGTGAATCACCAGAAGACTCGCTATTACATTGAAGAGTGAAATAAACAACACAGGTTGTTTACACTTTAAAGGACAAATTAAAGAAAGGAAAACGTTCTGATCTTTCTGAGGGATTTAAACTCTTTTTTTCTTGGAACTAGGCATATCTGAGATCTTATAATCTAGAATCAAAGAATCAGATACAGATATTCATCTGATTCTAGTTTTTCAGAAGCTGCAAGAGAGAACTATTGATTTTGTGAATGTTTGATGGAGAGCTATATCTCTTTCTCCACCTCTATCAAAACATCAGATTTTAGCTAATAATTGGAATTGAAGAATAATTGCAGGTTGCCCTAATTAAAAAAGAAAACAAGTAGTTGTAGTTTGACCTTTATCGTCTGTCCATATGTATACAGGATATTGAAGGCATTACAGGTCTCAAAATTCAAGTTGTCGAAGGCATTGCAAGTGTCGAGGTGATTCACATATATAATGCTTCTCTTACATTGACTTATTAGCCTATTCTGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U587946" ref_strand="+" ref_description="SGN-U587946 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>tctgttgggaagctgcaatatagaactattgattttgtgaatgttggatggagagctatatctctttctccacctctatcaaaacatcagattttagctaataattggaattgaagaataattgcaggttgccctaattaaaaaagaaaacaagtagttgtagtttgacctttatcgtctgtccatatgtatacaggatattgaaggcattacaggtctcaaaattcaagttgtcgagggcattgcaagtgtcgaggtgattcacatatataatgcttctcttacattgacttattagcctattctgttacaggaaatttctttgtagaaagtttacagctcaatcagcataatgcaccttagagatatattaaagtactaaattctgaagcatgctttaggttccttgtagtttcctacattcaatatgcaatatagtggacaacttccaggtggactatcttgtgctgcctttttgtgtttggagtttctctataaatgataggaacagtctatctaaatgaacgatatcctttaacttttgatggtgaggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0014P22.2" temp_strand="+" temp_description="C02SLm0014P22.2  AC215471.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0014P22 sequenced_by:kribb upload_account_name:korea">
        <position start="31435" stop="32588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31735" g_stop="32288" g_length="554"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="554" r_length="554" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0014P22.2" gen_strand="+" ref_id="SGN-U587946" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>554</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0014P22.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U587946" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31735" e_stop="32288"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTTTCAGAAGCTGCAAGAGAGAACTATTGATTTTGTGAATGTTTGATGGAGAGCTATATCTCTTTCTCCACCTCTATCAAAACATCAGATTTTAGCTAATAATTGGAATTGAAGAATAATTGCAGGTTGCCCTAATTAAAAAAGAAAACAAGTAGTTGTAGTTTGACCTTTATCGTCTGTCCATATGTATACAGGATATTGAAGGCATTACAGGTCTCAAAATTCAAGTTGTCGAGGGCATTGCAAGTGTCGAGGTGATTCACATATATAATGCTTCTCTTACATTGACTTATTAGCCTATTCTGTTACAGGAAATTTCTTTGTAGAAAGTTTACAGCTCAATCAGCATAATGCACCTTAGAGATATATTAAAGTACTAAATTCTGAAGCATGCTTTAGGTTCCTTGTAGTTTCCTACATTCAATATGCAATATAGTGGACAACTTCCAGGTGGACTATCTTGTGCTGCCTTTTTGTGTTTGGAGTTTCTCTATAAATGATAGGAACAGTCTATCTAAATGAACGATATCCTTTAACTTTTCATGGTGAGGG</genome_strand>
        <mrna_strand>TCTGTTGGGAAGCTGCAATATAGAACTATTGATTTTGTGAATGTTGGATGGAGAGCTATATCTCTTTCTCCACCTCTATCAAAACATCAGATTTTAGCTAATAATTGGAATTGAAGAATAATTGCAGGTTGCCCTAATTAAAAAAGAAAACAAGTAGTTGTAGTTTGACCTTTATCGTCTGTCCATATGTATACAGGATATTGAAGGCATTACAGGTCTCAAAATTCAAGTTGTCGAGGGCATTGCAAGTGTCGAGGTGATTCACATATATAATGCTTCTCTTACATTGACTTATTAGCCTATTCTGTTACAGGAAATTTCTTTGTAGAAAGTTTACAGCTCAATCAGCATAATGCACCTTAGAGATATATTAAAGTACTAAATTCTGAAGCATGCTTTAGGTTCCTTGTAGTTTCCTACATTCAATATGCAATATAGTGGACAACTTCCAGGTGGACTATCTTGTGCTGCCTTTTTGTGTTTGGAGTTTCTCTATAAATGATAGGAACAGTCTATCTAAATGAACGATATCCTTTAACTTTTGATGGTGAGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U597128" ref_strand="+" ref_description="SGN-U597128 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|218191057|gb|EEC73484.1| (e_value=5e-66) hypothetical; (*ATH) AT3G01380.1 (e_value=7e-61) | Symbol: None | phosphatidylinositolglycan class N (PIG-N) family protein, similar to phosphatidylinositolglycan class N short form GB:BAA82620 (gi:5631308) (Mus musculus) | chr3:144295-149835 REVERSE | Aliases: T13O15.2, T13O15_2; (*SWP) sp|Q4W9R7|MCD4_ASPFU (e_value=3e-28) GPI ethanolamine phosphate transferase 1 OS=Aspergillus fumigatus GN=mcd4; ">
      <seq>tcaagctgacatagcaccactgatgtccactcttcttggtctgccatgtcctgtcaactcggttggcaatctgcctcttcagtacatgaatctgaacaaggcagaagaagttgaagctgtgctggccaatacgaagcaaatcctcaatcagttccttcgaaagtcacagttaaagcaatcgacctcattatacatcaagcctttcaagcccttggctagttattcatcactattgcgtgaaattgagcaactgatttctctcaaagagtatgaaactgcaatgaaattatctgaacagcttaggagcttggcacttcaaggacttcactatttccagacatatgattggctgatgctgatgactgtaatcactcttggctatgttggttggatgatctatgtgatactccatgtcttgcaatcttatacatccctacctgcaaatatttttagcaaggagcaagtgcctagtccaagaagtacagctaagatacatcttttaggagggttgttgatgggagtagcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0014P22.2" temp_strand="+" temp_description="C02SLm0014P22.2  AC215471.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0014P22 sequenced_by:kribb upload_account_name:korea">
        <position start="36379" stop="39448"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36679" g_stop="36703" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="25" r_length="25" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36704" i_stop="36807" i_length="104">
            <donor d_prob="0.881" d_score="0.00"/>
            <acceptor a_prob="0.966" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36808" g_stop="36882" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="26" r_stop="100" r_length="75" r_score="0.973"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="36883" i_stop="37033" i_length="151">
            <donor d_prob="0.994" d_score="0.96"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="37034" g_stop="37100" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="101" r_stop="167" r_length="67" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="37101" i_stop="37481" i_length="381">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.854" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="37482" g_stop="37804" g_length="323"/>
          <reference_exon_boundary r_type="cDNA" r_start="168" r_stop="490" r_length="323" r_score="0.972"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="37805" i_stop="39112" i_length="1308">
            <donor d_prob="0.985" d_score="0.94"/>
            <acceptor a_prob="0.995" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="39113" g_stop="39148" g_length="36"/>
          <reference_exon_boundary r_type="cDNA" r_start="491" r_stop="526" r_length="36" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0014P22.2" gen_strand="+" ref_id="SGN-U597128" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>526</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0014P22.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U597128" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36679" e_stop="36703"/>
          <exon e_start="36808" e_stop="36882"/>
          <exon e_start="37034" e_stop="37100"/>
          <exon e_start="37482" e_stop="37804"/>
          <exon e_start="39113" e_stop="39148"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAGCTGACATAGCACCACTGATGGTCGATTACCTTGTCCTCTTCTGACAGTCCTATCTTTGAAGTGTCTTTCTATCATATCAACTTCGTCTAAAGTCTGACTCTGATATGATCTCTAAAAATTGCAGTCCACTCTTCTTGGTCTGCCATGTCCTATCAACTCAGTTGGCAATCTGCCTCTTCAGTACATGAATCTGAACAAGGTAGCTGCATTACTATAAGTTCTCTGTCTATTTTGCACTGTACGACTGTGTGATGGATTGGGAGAGATATACTGGTTTGCTGGTTCTTTGGGGCTATTTTGTTCTTTGTATTGAGATAGAATGCAGGTCTTAAAATCACTTTTATGTCCAGGCAGAAGAAGTTGAAGCTGTGCTGGCCAATACGAAGCAAATCCTCAATCAGTTCCTTCGAAAGTCACGTATCCTTCCCTATAACTTAGATTGTTTTTCACTTCTAATTTCATTCTGCCTCACTCATCTTACATGTTATTTCCTAATTTTCTTTTTGTTGCAATTCACAACTTTCAGAGTTTTAAATGTCAGTTAAGATAGAACCTTATTAAAAGAAAATGTCAGTCAAAATAGAAGTAACTGGTAGAACGATTTAAGTATAGCATATACCAGAATTAGGACAAGTTACCAATTATTAGACCAATAGAGGGGCAAAGTGATAAAATTAATTCCTGTGCTGTCATTCCAAACTGCTTCATCAATGTAACTGGGTTCTGGGGCTTGTCCTGTTTTCACATTCTAAATTGATTTTTGGTTTCATCTTTTGAGCATCCTTGACAAATATGTAGAGTTAAAGCAGTCGACCTCATTATACATCAAGCCTTTCAAGCCCTTGGCTAGTTATTCATCACTATTGCGTGAAATTGAGCAACTGATTTCTCTCAAAGAGTATGAAACTGCAGTGAAATTATCTGAACATCTTAGGAGCTTGGCACTTCAAGGACTTCACTATTTTCAGACATATGATTGGCTGATGCTGATGACTGTAATCACTCTTGGCTATGTTGGTTGGATGATCTATGTCATACTCCATATCTTGCAATCTTATACATCCCTACCTGCAAATATTTTTAGCAAGGACCAAGTGCCTAATCCAAGAAGTACAGTTAAGGTACCTGTTTTGCTCTATATGCACGTGCTGTTGTGTATTTCTTTGTCTGTGTTGGTTAGAAGAGGGTTGTAAAGGGAAGGTTCAAAATAAATTATATGTCTGTTTGGTGTTGAAAGTGTGATAGATTAGTAGGAAAAAGGGAGGAGGAAATTGACATATAAAAGCATTTATGTATGAAAAGTACTCGTGTTGTGCAAGTTCAAGTAATTTTCTCTATTTATACTAAAACCAACAAAAATATCTTGACTGTTGATATATGATTTTAATTCGAGGCGGAGATATACAAAGGGTTGTCCCGTTGTTTTGCTACCTCTTTGAGATAGAGTACATCTAGTGACAAATATTGATATGCCAAAATTACACATGTTCCTAAATCATATAATCTATTTCATAGCTCCAGAAAGTTCAAAGGTGAGACCATAATCAGTTTATCTATGCATTGTAAGTGGGAGGAGCAGGTTTTCCACCAAAACTATAGAAAGTAAAGACTTACTAAGGAAAGAAATTGAAATGTAAGAGCAAAGTGGGAGTAATGACACCTGATGTTCATTTGGACATTAATTCTCTAGGTTTTTTTTCTTTCAACCCCCAAAGGTTTCTCCTTTCTTCTTTTTCTAAAATGTCCCATGAAAGTCATACCCATCTTGGAGACCATATTTGGTTATATTTTGTCTCTATTATGCCTGATCTCCAAAGCTATTGTATCTAGTGTTGTCAAAGGCACGCTAAAGCCTGATATGAGGCTCTAAACGTGTTGAGTGCTTCGCGTCACTTAGTATGTGCTTCACTGTCGTCATCAAGGTTTTAAGACATACAAACCTTGCCAATGAGTGGTTCTTGAAGAGACGGCACTAAAAAATTAATCTTTCAGTGTCTTTGTATGTTATATATGTTATTTGTGCTTATAATATTAGTCTTGGACTAAACATATGTAATTTTGTATCCATTTGCGTCTTTTTCATAAAAGCCACACTTTATTTGCGCTTTGCGCTTAAAGACCCAACAGACGTTAGAGTTATTTTTGTGTTTTTTGCTTTTCATAACACTGATGAATCAAGTGTTCATCTGGGACTTCTCATCAGGGAAATTCTTAAAAACTTATATTATCACGGTCCTCTATTGGCGTATTCATGCCTCTTCTTATTATACTATTTTGGCATTTAGAAATTGATGTTATTAGCACAAGTGTCTTCCTCCCATAAAAATAGATGGATATTCTTGACCGTCATTCGTAAGGTGATACTAGAAAGAATTGCTATCTGACCAATTGATTCCCATGTTCTTGCTTATATTCTTTTTCTATGGCAGATACATCTTTTAGGAGGGTTGTTGATGGGAGTAGCG</genome_strand>
        <mrna_strand>TCAAGCTGACATAGCACCACTGATG........................................................................................................TCCACTCTTCTTGGTCTGCCATGTCCTGTCAACTCGGTTGGCAATCTGCCTCTTCAGTACATGAATCTGAACAAG.......................................................................................................................................................GCAGAAGAAGTTGAAGCTGTGCTGGCCAATACGAAGCAAATCCTCAATCAGTTCCTTCGAAAGTCAC.............................................................................................................................................................................................................................................................................................................................................................................................AGTTAAAGCAATCGACCTCATTATACATCAAGCCTTTCAAGCCCTTGGCTAGTTATTCATCACTATTGCGTGAAATTGAGCAACTGATTTCTCTCAAAGAGTATGAAACTGCAATGAAATTATCTGAACAGCTTAGGAGCTTGGCACTTCAAGGACTTCACTATTTCCAGACATATGATTGGCTGATGCTGATGACTGTAATCACTCTTGGCTATGTTGGTTGGATGATCTATGTGATACTCCATGTCTTGCAATCTTATACATCCCTACCTGCAAATATTTTTAGCAAGGAGCAAGTGCCTAGTCCAAGAAGTACAGCTAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACATCTTTTAGGAGGGTTGTTGATGGGAGTAGCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U604579" ref_strand="+" ref_description="SGN-U604579 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157345527|emb|CAO14825.1| (e_value=5e-69) unnamed; (*ATH) AT3G01380.1 (e_value=4e-49) | Symbol: None | phosphatidylinositolglycan class N (PIG-N) family protein, similar to phosphatidylinositolglycan class N short form GB:BAA82620 (gi:5631308) (Mus musculus) | chr3:144295-149835 REVERSE | Aliases: T13O15.2, T13O15_2; (*SWP) sp|O95427|PIGN_HUMAN (e_value=1e-23) GPI ethanolamine phosphate transferase 1 OS=Homo sapiens GN=PIGN; ">
      <seq>ggtttggctttcaactattcatagaacagagaagcaggaattattagtcctccaccaactgttgaattggtccatagctggcttctcgatgatacctcccacctcttttcagctactggtctcttatccaggctgacttccacttttccttggcgttgcacctcccttcctgcttctatcaatcggttatgaagcagtcttctatggtgctctcagtcttgcacttatagcatggatactggcggaaaatgcttatctccatataagcaagttcagatcatcagctccagtcaaatccatggaggatgataataggtgtctggagttatccgatatgaggatcccattaacttttatggtctttttcaatattgcattctttggaactggtaattttgcaagtattgcaagttttgagatctcctccgtgtatcgattcattacaattttcagtccttttctgatggcggcattacttattttcaagctgttgataccattcatacttgtcatatgtgcgttcagtgcaatcacaaaattggtgcaagttccattgttgggatgctattttctggntgatcttgtgctctgatgtaatgacaatccatttcttcttcctggtccgaaataaaggaagctggatggaaattggcaacagcattagccatttcggaattatgagtgctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0014P22.2" temp_strand="+" temp_description="C02SLm0014P22.2  AC215471.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0014P22 sequenced_by:kribb upload_account_name:korea">
        <position start="39684" stop="43495"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="39984" g_stop="40063" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="80" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="40064" i_stop="41073" i_length="1010">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="41074" g_stop="41176" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="81" r_stop="186" r_length="106" r_score="0.942"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="41177" i_stop="41267" i_length="91">
            <donor d_prob="0.963" d_score="0.96"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="41268" g_stop="41436" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="187" r_stop="355" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="41437" i_stop="41617" i_length="181">
            <donor d_prob="0.465" d_score="1.00"/>
            <acceptor a_prob="0.419" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="41618" g_stop="41716" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="356" r_stop="454" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="41717" i_stop="41814" i_length="98">
            <donor d_prob="0.894" d_score="1.00"/>
            <acceptor a_prob="0.913" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="41815" g_stop="41873" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="455" r_stop="513" r_length="59" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="41874" i_stop="42782" i_length="909">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="42783" g_stop="42888" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="514" r_stop="620" r_length="107" r_score="0.981"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="42889" i_stop="43128" i_length="240">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.920" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="43129" g_stop="43195" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="621" r_stop="687" r_length="67" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0014P22.2" gen_strand="+" ref_id="SGN-U604579" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>683</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0014P22.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U604579" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="39984" e_stop="40063"/>
          <exon e_start="41074" e_stop="41176"/>
          <exon e_start="41268" e_stop="41436"/>
          <exon e_start="41618" e_stop="41716"/>
          <exon e_start="41815" e_stop="41873"/>
          <exon e_start="42783" e_stop="42888"/>
          <exon e_start="43129" e_stop="43195"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTTTGGCTTTCAACTATTCATAGAACAGAGAAGCAGGAATTATTAGTCCTCCACCAACTGTTGAATTGGTCCATAGCTGGTATTCTTTTTTTCTTTTCTCCGTATGCTAGTGTAGCTCAGTCTTAGAATTGTTCTCGGATGTCCTATGAACAGAATTGATGTAGCCTTTACACCCATTTATTCCTTCAATTTTTTGTTTTGTTAATGCAATGGGATGTTAAACAGTGAATTCGAAAATGGTGAGATTTTACATTTTCTTAATAATTGTTCTAGTAAAAGGCATGCTATCCAGACTTACTTTTCAAAATTTCTCTTCTCCTACTGGGTGTCTTACAGTTGCCCTCCTCACACAGCTGCTTGTCTTCATCAGCATTGGTGTCCCATGTCAAATGTGTAAGACATGAATATGGCATTAACTCAAACAAGAGTCTGTGTCATGTAGGTTGCATCCAGTCATACAACAGCTACACCTCAGTCCCAATCAAAATGGGATCGACTATATGAATGCTCACCGATTATGTTCCTCATTCATGTTCATCTCAGGCCAACATTTTACAAAATTTCAAATAACTAACTAAAAGTTTTCTATATTTCCTACTGGCATAAGAATCTCTAATAGGGCTTAAAAAACTCTGAGAAAGCACAAGACCTAAAAACTTGATAACATTACTAGAATAAATACTCAACTAATTGGTATCACCTATATAGATCATTTTCTTCTATTGTGCCCATCCACAAATTACAAAGAGATTGTAAAACTTCATTGACTCCTTCCATGTGATTTTATGAATAATTAGTAGGCTGTATCCCTTCATAAAGAAATAATATCTTTGGTAGACGTCAACTAGTTTATGGTAATGTATCGCGTTGTTGCATATCAGACTGTCCTTTGTTACTCTTGCCCTCATTTTCGGGCTCTTTTGGTTCATTTTAGTGATAAACTTTTATGAAGCTTTTCCTGACTAATTTTGTTTCTTTATAACTATTTGTTTCACTATTTTCTGTTCTTCAGCCTGAAATTTCACATATTTTGTTTTCTTTGTGAACATTTTAACAACCCTGTATTCATCATTTGACTTGTTTCTTTAGGCTTCTCGATGATA-CTCCCA-CTCTTTTCAGCTACTGGTCTCTTATCCAGGCTGACTTCCA-TTTTCCTTGGCGTTGCACCTCCCTTCCTGCTTCTATCAATCGGGTATCTCCATCATTTTGTTGCTTAGGCTAGGAGTAAATTCAATTTTATAACTTTATGAGTCAGAATCTATAAGCTTTTGAATCTCCTGCAGTTATGAAGCAGTCTTCTATGGTGCTCTCAGTCTTGCACTTATAGCATGGATACTGGCGGAAAATGCTTATCTCCATATAAGCAAGTTCAGATCATCAGCTCCAGTCAAATCCATGGAGGATGATAATAGGTGTCTGGAGTTATCCGATATGAGGATCCCATTAACTTTTGTAAGTTTTACGTTCTGTTTAGCTTAATGATGTTCTACTTATGGAAAAAAGAAAGACAGTGACATTGTCTTTAGCCTTGTTAATTTAACACTTTTGGGGTGTAAGCATCTAGCTCTGTTGTCTTTCTATATATCCAAATAGTGAAGTGTCTTAAATTGCTGATGAAATTTCTTCTTTTTAGATGGTCTTTTTCAATATTGCATTCTTTGGAACTGGTAATTTTGCAAGTATTGCAAGTTTTGAGATCTCCTCCGTGTATCGATTCATTACAATTTTCAGTGTAAGTGGAACTGAACATCCTTGTTTATGAATCCTTTGTTTCTTATTTTGCCTTTCATTTGCATATGGTGACAGATGCGATTGTTCCTTTTTTTGCAGCCTTTTCTGATGGCGGCATTACTTATTTTCAAGCTGTTGATACCATTCATACTTGTCATGTAAGTACAACTTGCAAATTTTCCTTCTTAACAGTTCGAATGGAAAACTACTGTAATTCAATGATTGTGGTGGAAATCTTTTCTTGGAGTTTCTAGGGCTTGGAGGTTGTTTTTCTCCCTCAAATTCATCCAAATTAGATGTGACAATTACCGACCACTCTTACATATCTAAAATATTGGTTTGAGGGATTGCCTGTTGCAGCGCTCAACTTTCACCTGTTGAGACACTCCTCGCTGCCTGGAGCAACTAGAAGATATTGTTAAAGCGTTGCAGCGCCCAAATTTCGACCGGTGCTACGGTGGCTGCTGTTTTCCACGAATATATCTAAATTATTTCCAACTCCAAATTGTTCTCCACTTGCTTCAATCCACTCCTCCTCATTTCCAAACATCCATATTACTTTCCAAATACAACTTTTGAGTGCTGAACACTCTTGTGGCAACTTAACCGCGTTATTAGTTGTGTTAGCCATAACTAGAGTGTAGAAATCTTCAGGGTATTTTACCATCTTTCTGTGTTGGGTGGTTGGGTTCTTCTTGGTATTACCTTGCAGCCTTTACATGTAGGCTGTAGCCCTGCAATTTCTTCTAGTGTGGGTGAAGTTCATTTGGTCATGATTACTCCTCTCTTAAAAGTTATTCAGTGCATTCCCTGTTTTAAAGTAATTGTTGGCTAATTCAAACTTTTAAGATAACAAAGTGCAGAGCACAAGAACTACCTGATCTTCACTGAGAACAAACTGCAGTATAGGAACCTATATTTATACGTCAAGAAGCCTTTAGAATTTTTGGAGACCAAGAAAATTTGTATTTGATATGCAAGTAGAAATATTTTGGAATTCTTGGTCTTGCTGAGATCAGTTGTGTACCATGGATGACTTTTATTTTTTTGTTGTGCATTAACTGCAGATGTGCGTTCAGTGCAATCACAAAATTGGTGCAAGTTCCATTGTTGGGATGCTATTTTCTGG-TGATCTTGTGCTCTGATGTAATGACAATCCATTTCTTCTTCCTGGTAAGACACTATTATTCCTCCTATGGTGCAATTCTCATATGTTTCTCCACCTACTTTCCATCCAATGTGTCTTGTTTGAAAAACTTAGGATTCCAGTATCAATATGCTCTTCTCTGTCATAATCTTCAACAGCTTTGAATTTTTCTGTTTCATGCTTCCGACTGTTTTATCTCCAGAAACATGATTCAGGGGGTTCATCATGGTTAGGATTCATCTTACTTGTTTTCTGATTGGTAATAGGTCCGAAATAAAGGAAGCTGGATGGAAATTGGCAACAGCATTAGCCATTTCGGAATTATGAGTGCTC</genome_strand>
        <mrna_strand>GGTTTGGCTTTCAACTATTCATAGAACAGAGAAGCAGGAATTATTAGTCCTCCACCAACTGTTGAATTGGTCCATAGCTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCTCGATGATACCTCCCACCTCTTTTCAGCTACTGGTCTCTTATCCAGGCTGACTTCCACTTTTCCTTGGCGTTGCACCTCCCTTCCTGCTTCTATCAATCGG...........................................................................................TTATGAAGCAGTCTTCTATGGTGCTCTCAGTCTTGCACTTATAGCATGGATACTGGCGGAAAATGCTTATCTCCATATAAGCAAGTTCAGATCATCAGCTCCAGTCAAATCCATGGAGGATGATAATAGGTGTCTGGAGTTATCCGATATGAGGATCCCATTAACTTTT.....................................................................................................................................................................................ATGGTCTTTTTCAATATTGCATTCTTTGGAACTGGTAATTTTGCAAGTATTGCAAGTTTTGAGATCTCCTCCGTGTATCGATTCATTACAATTTTCAGT..................................................................................................CCTTTTCTGATGGCGGCATTACTTATTTTCAAGCTGTTGATACCATTCATACTTGTCAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTGCGTTCAGTGCAATCACAAAATTGGTGCAAGTTCCATTGTTGGGATGCTATTTTCTGGNTGATCTTGTGCTCTGATGTAATGACAATCCATTTCTTCTTCCTG................................................................................................................................................................................................................................................GTCCGAAATAAAGGAAGCTGGATGGAAATTGGCAACAGCATTAGCCATTTCGGAATTATGAGTGCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U597345" ref_strand="+" ref_description="SGN-U597345 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|147807720|emb|CAN66553.1| (e_value=4e-55) hypothetical; (*ATH) AT5G02850.1 (e_value=6e-52) | Symbol: None | hydroxyproline-rich glycoprotein family protein | chr5:652108-653671 FORWARD | Aliases: F9G14.160, F9G14_160; ">
      <seq>ctcctctgtgttagggcagaaaaatctgaagctgattcctccattttcttccacaaacgaaagaatgttcaacaccaacttctgcaatcgccggcacggctaggcctgccaactcccagttcaccttctctacaaaacacaactcctcctactaagttctcctcgcaagcgtcgcaacccaatcaacaggcaaatatattaactaccactaccacctcatcaacgctccttcctcttctcccacctctctctagagctcagtctcttctcattcaaatggcgtctcttgcgtcaaggctctttgaagtctcacctaaccggtcccattggcttagtgcttttcgtggctctttcccttcatttctgccttctacagcaccagttccacaagattccagcccatcgtcctcaaaagaaatcctctcagcgtttacttctcttcagacacagctgtttgaagcagttgctgaactacaagaaatacttgatcttcaagatgagaagcaaaaagtcacccgtgaaattaggttaaatgattctgcaattcttgccttcgccaacaaactcaaaggagctgagcatgttcttgacaatcttgttgatgactatgctgactatcgtcgccccaaacgggccaagttggaaaacgatactgaagaatcttcattaacatctgtggcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0014P22.2" temp_strand="+" temp_description="C02SLm0014P22.2  AC215471.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0014P22 sequenced_by:kribb upload_account_name:korea">
        <position start="44013" stop="45826"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44313" g_stop="44375" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="63" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="44376" i_stop="44908" i_length="533">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.841" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="44909" g_stop="45526" g_length="618"/>
          <reference_exon_boundary r_type="cDNA" r_start="64" r_stop="681" r_length="618" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0014P22.2" gen_strand="+" ref_id="SGN-U597345" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>681</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0014P22.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U597345" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44313" e_stop="44375"/>
          <exon e_start="44909" e_stop="45526"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCCTCTGTGTTAGGGCAGAAAAATCTGAAGCTGATTCCTCCATTTTCTTCCACAAACGAAAGGTATACGCTCTATTATTTTTCTCCTTCCTTGTACGTTAACTCTATTTTCCCACTGTTTCCAGTTCGACATTTGTAGTTTCTTATCTCTGTTTGTTTCAGTTAAGTCCCAAATATATGATGGGTCATGCGATGCTTTCTGCATTTTGCGGTTGTTTTTTGGGATATATAGATGTTTATTACTTCTTTTATTTGCCTTTGAAATAAAATAATTTGTAATTTGATGGTAAAGATAAATACTCATTGTAATTTGTAAAACTTACAGATTCCATACATTGAATCTAATGCTTGTTTCTAGGAAATTGAATGTTGATACTGAAAAATTGCAAGTTCAGTGTCCATTAACTTTAAAGTTTGAATTTTTGAAGTATTTTCTCCTTTTTCGCATGTGTATGTATGCTTTTCCCTCGGATTGCTATTCTTACCATCGTTTAGTAATATGGTGATTCATGCCTAATGTTGTTTATTGATTTTATTTTATTTTTAACTTTTACCATTTCTAGTTTTTTCAATCGTGGTCTTTGAAGATGTTACAGAATGTTCAACACCAACTTCTGCAATCGCCGGCACGGCTAGGCCTGCCAACTCCCAGTTCACCTTCTCTACAAAACACAACTCCTCCTACTAAGTTCTCCTCGCAAGCGTCGCAACCCAATCAACAGGCAAATATATTAACTACCACTACCACCTCATCAACGCTCCTTCCTCTTCTCCCACCTCTCTCTAGAGCTCAGTCTCTTCTCATTCAAATGGCGTCTCTTGCGTCAAGGCTCTTTGAAGTCTCACCTAACCGGTCCCATTGGCTTAGTGCTTTTCGTGGCTCTTTCCCTTCATTTCTGCCTTCTACAGCACCAGTTCCACAAGATTCCAGCCCATCGTCCTCAAAAGAAATCCTCTCAGCGTTTACTTCTCTTCAGACACAGCTGTTTGAAGCAGTTGCTGAACTACAAGAAATACTTGATCTTCAAGATGAGAAGCAAAAAGTCACCCGTGAAATTAGGTTAAATGATTCTGCAATTCTTGCCTTCGCCAACAAACTCAAAGGAGCTGAGCATGTTCTTGACAATCTTGTTGATGACTATGCTGACTATCGTCGCCCCAAACGGGCCAAGTTGGAAAACGATACTGAAGAATCTTCATTAACATCTGTGGCG</genome_strand>
        <mrna_strand>CTCCTCTGTGTTAGGGCAGAAAAATCTGAAGCTGATTCCTCCATTTTCTTCCACAAACGAAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTTCAACACCAACTTCTGCAATCGCCGGCACGGCTAGGCCTGCCAACTCCCAGTTCACCTTCTCTACAAAACACAACTCCTCCTACTAAGTTCTCCTCGCAAGCGTCGCAACCCAATCAACAGGCAAATATATTAACTACCACTACCACCTCATCAACGCTCCTTCCTCTTCTCCCACCTCTCTCTAGAGCTCAGTCTCTTCTCATTCAAATGGCGTCTCTTGCGTCAAGGCTCTTTGAAGTCTCACCTAACCGGTCCCATTGGCTTAGTGCTTTTCGTGGCTCTTTCCCTTCATTTCTGCCTTCTACAGCACCAGTTCCACAAGATTCCAGCCCATCGTCCTCAAAAGAAATCCTCTCAGCGTTTACTTCTCTTCAGACACAGCTGTTTGAAGCAGTTGCTGAACTACAAGAAATACTTGATCTTCAAGATGAGAAGCAAAAAGTCACCCGTGAAATTAGGTTAAATGATTCTGCAATTCTTGCCTTCGCCAACAAACTCAAAGGAGCTGAGCATGTTCTTGACAATCTTGTTGATGACTATGCTGACTATCGTCGCCCCAAACGGGCCAAGTTGGAAAACGATACTGAAGAATCTTCATTAACATCTGTGGCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U573799" ref_strand="+" ref_description="SGN-U573799 Tomato 200607#2 [14 ESTs aligned] (*GB) gi|147852950|emb|CAN81266.1| (e_value=3e-112) hypothetical; (*ATH) AT5G40150.1 (e_value=7e-96) | Symbol: None | peroxidase, putative, identical to peroxidase ATP26a {Arabidopsis thaliana} GP:1890317:emb:CAA72487 | chr5:16076737-16078271 REVERSE | Aliases: MSN9.50, MSN9_50; (*SWP) sp|Q9FL16|PER63_ARATH (e_value=6e-95) Peroxidase 63 OS=Arabidopsis thaliana GN=PER63; ">
      <seq>agaaaagcacttggacttatggaagaaaatgagagaggaacatgtttcattaaataaaaaataaaaacatatatcattgaatgaagagaagtgagaaatatgaagaccccattgaagccctccagctatttcccatcccccatttacctatttccctctcctttttttagccatttttttctattaactttcccttctcaaacactgagctgaaaaacagagcaaatgggtttaactcttctgctttttctttgcttctctgttatcttaactccttctttatcacagcaccattcgccgctaaatactgcttattaccggagatcatgtccaagatttgaacaaattatgcaagaaaccactacaaacaaacagatcacttcacctactaccgccgccgctaccctccgtctcttcttccacgactgcttcgtcggcggctgcgacgcgtccatcctcgtctcctccactcctttcaacaaagctgaacgtgacgcagaaatcaacctatcactccccggcgatgggttcgatgtagtcgtacgcgccaaaacggcgcttgaacttgcttgccccggcgttgtctcttgctccgacattctcgccgtcgctgcccggaatctcgttgttcaaaccggaggcccgttttatccagttaatttgggccgtaaagattcttttacttctaaagcttcgttggttgaaggaaatctgccccgacccacaatgtcgatggatcaaatcatacaaattttcgggtcaagagggttttcggtaccggaaatggtagcgttatccggtgctcacacaattgggttttcccattgtaaagagttcagctcaaatctttacaattacaacaaaacttcccaatatgatccttcttacaatcccagatttgctcaagctttgagaaatgcttgtaataatttccagaaagatccaacattgtccgttttcaacgacatcatgactccgaataagtttgacaacatgtattaccagaacttacccaagggtttgggtcctgtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0014P22.2" temp_strand="+" temp_description="C02SLm0014P22.2  AC215471.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0014P22 sequenced_by:kribb upload_account_name:korea">
        <position start="51064" stop="52694"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="51364" g_stop="52394" g_length="1031"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1032" r_length="1032" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0014P22.2" gen_strand="+" ref_id="SGN-U573799" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1031</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0014P22.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U573799" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="51364" e_stop="52394"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAAAGCACTTGGACTTATGGAAGAAAATGAGAGAGGAACATGTTTCATTAAATAAAAAATAAAAACATATATCATTGAATGAAGAGAAGTGAGAAATATGAAGACCCCATTGAAGCCCTCCAGCTATTTCCCATCCCCCATTTACCTATTTCCCTCTCCTTTTTTTAGCCATTTTTTTCTATTAACTTTCCCTTCTCAAACACTGAGCTGAAAAACAGAGCAAATGGGTTTAACTCTTCTGCTTTTTCTTTGCTTCTCTGTTATCTTAACTCCTTCTTTATCACAGCACCATTCGCCGCTAAATACTGCTTATTACCGGAGATCATGTCCAAGATTTGAACAAATTATGCAAGAAACCACTACAAACAAACAGATCACTTCACCTACTACCGCCGCCGCTACCCTCCGTCTCTTCTTCCACGACTGCTTCGTCGGCGGCTGCGACGCGTCCATCCTCGTCTCCTCCACTCCTTTCAACAAAGCTGAACGTGACGCAGAAATCAACCTATCACTCCCCGGCGATGGGTTCGATGTAGTCGTACGCGCCAAAACGGCGCTTGAACTTGCTTGCCCCGGCGTTGTCTCTTGCTCCGACATTCTCGCCGTCGCTGCCCGGAATCTCGTTGTTCAAACCGGAGGCCCGTTTTATCCAGTTAATTTGGGCCGTAAAGATTCTTTTACTTCTAAAGCTTCGTTGGTTGAAGGAAATCTGCCCCGACCCACAATGTCGATGGATCAAATCATACAAATTTTCGGGTCAAGAGGGTTTTCGGTACCGGAAATGGTAGCGTTATCCGGTGCTCACACAATTGGGTTTTCCCATTGTAAAGAGTTCAGCTCAAATCTTTACAATTACAACAAAACTTCCCAATATGATCCTTCTTACAATCCCAGATTTGCTCAAGCTTTGAGAAATGCTTGTAATAATTTCCAGAAAGATCCAACATTGTCCGTTTTCAACGACATCATGACTCCGAATAAGTTTGACAACATGTATTACCAGAACTTACCCAAGGGTTTGGGT-CTGTT</genome_strand>
        <mrna_strand>AGAAAAGCACTTGGACTTATGGAAGAAAATGAGAGAGGAACATGTTTCATTAAATAAAAAATAAAAACATATATCATTGAATGAAGAGAAGTGAGAAATATGAAGACCCCATTGAAGCCCTCCAGCTATTTCCCATCCCCCATTTACCTATTTCCCTCTCCTTTTTTTAGCCATTTTTTTCTATTAACTTTCCCTTCTCAAACACTGAGCTGAAAAACAGAGCAAATGGGTTTAACTCTTCTGCTTTTTCTTTGCTTCTCTGTTATCTTAACTCCTTCTTTATCACAGCACCATTCGCCGCTAAATACTGCTTATTACCGGAGATCATGTCCAAGATTTGAACAAATTATGCAAGAAACCACTACAAACAAACAGATCACTTCACCTACTACCGCCGCCGCTACCCTCCGTCTCTTCTTCCACGACTGCTTCGTCGGCGGCTGCGACGCGTCCATCCTCGTCTCCTCCACTCCTTTCAACAAAGCTGAACGTGACGCAGAAATCAACCTATCACTCCCCGGCGATGGGTTCGATGTAGTCGTACGCGCCAAAACGGCGCTTGAACTTGCTTGCCCCGGCGTTGTCTCTTGCTCCGACATTCTCGCCGTCGCTGCCCGGAATCTCGTTGTTCAAACCGGAGGCCCGTTTTATCCAGTTAATTTGGGCCGTAAAGATTCTTTTACTTCTAAAGCTTCGTTGGTTGAAGGAAATCTGCCCCGACCCACAATGTCGATGGATCAAATCATACAAATTTTCGGGTCAAGAGGGTTTTCGGTACCGGAAATGGTAGCGTTATCCGGTGCTCACACAATTGGGTTTTCCCATTGTAAAGAGTTCAGCTCAAATCTTTACAATTACAACAAAACTTCCCAATATGATCCTTCTTACAATCCCAGATTTGCTCAAGCTTTGAGAAATGCTTGTAATAATTTCCAGAAAGATCCAACATTGTCCGTTTTCAACGACATCATGACTCCGAATAAGTTTGACAACATGTATTACCAGAACTTACCCAAGGGTTTGGGTCCTGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U573800" ref_strand="+" ref_description="SGN-U573800 Tomato 200607#2 [6 ESTs aligned] (*GB) gi|147811771|emb|CAN68188.1| (e_value=6e-73) hypothetical; (*ATH) AT5G40150.1 (e_value=3e-70) | Symbol: None | peroxidase, putative, identical to peroxidase ATP26a {Arabidopsis thaliana} GP:1890317:emb:CAA72487 | chr5:16076737-16078271 REVERSE | Aliases: MSN9.50, MSN9_50; (*SWP) sp|Q9FL16|PER63_ARATH (e_value=3e-69) Peroxidase 63 OS=Arabidopsis thaliana GN=PER63; ">
      <seq>aaaataacctatcactccccggcgatgggttcgatgttctaccccaaaacgggcttgaacttgcttgccccggcgttgctcttgctccgacattctcgccgcctgccggaatctcgtgtcaaaccggaggcccgttatccagttaatttgggccgtaaagattcttttacttctaaagcttcgttggttgaagggaatctgccccgacccacaatgtcgatggatcaaatcattaaaattttcgggtcaagagggttttcggtaccggaaatggtagcattatccggtgctcacacaattgggttttcccattgtaaagagttcagctcaaatctttacaattacaacaaaacttcccaatatgatccttcttacaatcccagatttgctcaagctttgagaaatgcttgtaacaatttccagaaagatccaacattgtccgttttcaacgacatcatgactccgaataagtttgacaacatgtattaccagaacttacccaagggtttgggtctgttgtcttcggaccggggtctgttttcagatccgaggacaagagctcatgttgaagagtatattagagatcaaaatgcattctttaaggcgtttgcttcagcaatgcagaagctaagtgatcatggtgttaaaattgggagaagtggtgagatcagacacagatgtgatgctttcaacaattaaactatttgaggggtattgattatgttactgtacgttcgaattttttgttgaatttaatcactcacaagacgaaagtaaaacttataatatgtatacaatgttttttactatcatttttattaagattacaaggctctgcttcagttctgcttttagaacaactactactactactacttgtgattagtgtgtgttgagatgcaggtaagaggctgtttgttcgtcgaatttgattcaataagaaatgaaaccgtaaataaagtttgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0014P22.2" temp_strand="+" temp_description="C02SLm0014P22.2  AC215471.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0014P22 sequenced_by:kribb upload_account_name:korea">
        <position start="51563" stop="53143"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="51863" g_stop="52843" g_length="981"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="967" r_length="967" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0014P22.2" gen_strand="+" ref_id="SGN-U573800" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>981</cumulative_length_of_scored_exons>
        <coverage percentage="1.014" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0014P22.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U573800" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="51863" e_stop="52843"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATCAACCTATCACTCCCCGGCGATGGGTTCGATGTAGTCGTACGCGCCAAAACGGCGCTTGAACTTGCTTGCCCCGGCGTTGTCTCTTGCTCCGACATTCTCGCCGTCGCTGCCCGGAATCTCGTTGTTCAAACCGGAGGCCCGTTTTATCCAGTTAATTTGGGCCGTAAAGATTCTTTTACTTCTAAAGCTTCGTTGGTTGAAGGAAATCTGCCCCGACCCACAATGTCGATGGATCAAATCATACAAATTTTCGGGTCAAGAGGGTTTTCGGTACCGGAAATGGTAGCGTTATCCGGTGCTCACACAATTGGGTTTTCCCATTGTAAAGAGTTCAGCTCAAATCTTTACAATTACAACAAAACTTCCCAATATGATCCTTCTTACAATCCCAGATTTGCTCAAGCTTTGAGAAATGCTTGTAATAATTTCCAGAAAGATCCAACATTGTCCGTTTTCAACGACATCATGACTCCGAATAAGTTTGACAACATGTATTACCAGAACTTACCCAAGGGTTTGGGTCTGTTGTCTTCGGACCGGGGTCTGTTTTCAGATCCGAGGACAAGAGTTCATGTTGAAGAGTATATTAGAGATCAAAATGCATTCTTTAAGGCGTTTGCTTCAGCAATGCAGAAGCTAAGTGATCATGGTGTTAAAATTGGGAGAAGTGGTGAGATCAGACACAGATGTGATGCTTTCAACAATTAAACTATTTGAGGGGTATTGATTATGTTACTGTACGTTCGAATTTTTTGTTGAATTTAATCACTCACAAGACGAAAGTAAAACTTATAATATGTATACAATGTTTTTTACTATCATTTTTATTAAGATTACAAGGCTCTGCTTCAGTTCTGCTTTTAGAACAACTACTACTACTACTACTTGTGATTAGTGTGTGTTGAGATGCAGGTAAGAGGCTGTTTGTTCGTCGAATTTGATTCAATAAGAAATGAAACCGTAAATAAAGTTTGCT</genome_strand>
        <mrna_strand>AAAATAACCTATCACTCCCCGGCGATGGGTTCGATGT--TC-TAC-C-CCAAAACGG-GCTTGAACTTGCTTGCCCCGGCGTTG-CTCTTGCTCCGACATTCTCGCCG-C-CTG-CCGGAATCTCG-TG-TCAAACCGGAGGCCCG--TTATCCAGTTAATTTGGGCCGTAAAGATTCTTTTACTTCTAAAGCTTCGTTGGTTGAAGGGAATCTGCCCCGACCCACAATGTCGATGGATCAAATCATTAAAATTTTCGGGTCAAGAGGGTTTTCGGTACCGGAAATGGTAGCATTATCCGGTGCTCACACAATTGGGTTTTCCCATTGTAAAGAGTTCAGCTCAAATCTTTACAATTACAACAAAACTTCCCAATATGATCCTTCTTACAATCCCAGATTTGCTCAAGCTTTGAGAAATGCTTGTAACAATTTCCAGAAAGATCCAACATTGTCCGTTTTCAACGACATCATGACTCCGAATAAGTTTGACAACATGTATTACCAGAACTTACCCAAGGGTTTGGGTCTGTTGTCTTCGGACCGGGGTCTGTTTTCAGATCCGAGGACAAGAGCTCATGTTGAAGAGTATATTAGAGATCAAAATGCATTCTTTAAGGCGTTTGCTTCAGCAATGCAGAAGCTAAGTGATCATGGTGTTAAAATTGGGAGAAGTGGTGAGATCAGACACAGATGTGATGCTTTCAACAATTAAACTATTTGAGGGGTATTGATTATGTTACTGTACGTTCGAATTTTTTGTTGAATTTAATCACTCACAAGACGAAAGTAAAACTTATAATATGTATACAATGTTTTTTACTATCATTTTTATTAAGATTACAAGGCTCTGCTTCAGTTCTGCTTTTAGAACAACTACTACTACTACTACTTGTGATTAGTGTGTGTTGAGATGCAGGTAAGAGGCTGTTTGTTCGTCGAATTTGATTCAATAAGAAATGAAACCGTAAATAAAGTTTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U577105" ref_strand="+" ref_description="SGN-U577105 Tomato 200607#2 [2 ESTs aligned] ">
      <seq>caatcgaaccaagtaattgaaacgaaaaaaatgacaatacaatctgtaatgaaaaatctttcaaaattgttggcatgtaaaagtcagcattaaggaaataaaagagaatggaagggctaagcagggttcaaaagttatacattaacttatcccagngtaaaaatacttgagcaattgtagctattgctcatgcactaaaagtccagngtaaaaattttagngcanaaattgtaaccttcccagtagcaccacacatcacatcaaagtaaagattgtgtcaatggt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0014P22.2" temp_strand="+" temp_description="C02SLm0014P22.2  AC215471.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0014P22 sequenced_by:kribb upload_account_name:korea">
        <position start="53220" stop="54104"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53520" g_stop="53804" g_length="285"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="285" r_length="285" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0014P22.2" gen_strand="+" ref_id="SGN-U577105" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>285</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0014P22.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U577105" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53520" e_stop="53804"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATCGAACCAAGTAATTGAAACGAAAAAAATGACAATACAATCTGTAATGAAAAATCTTTCAAAATTGTTGGCATGTAAAAGTCAGCATTAAGGAAATAAAAGAGAATGGAAGGGCTAAGCAGGGTTCAGAAGTTATACATTAACTTATCCCAGTGTAAAAATACTTGAGCAATTGTAGCTATTGCTCATGCACTAAAAGTCCAGTGTAAAAATTTTAGTGCAGAAATTGTAACCTTCCCAGTAGCACCACACATCACATCAGAGTAAAGATTGTGTCAATGGT</genome_strand>
        <mrna_strand>CAATCGAACCAAGTAATTGAAACGAAAAAAATGACAATACAATCTGTAATGAAAAATCTTTCAAAATTGTTGGCATGTAAAAGTCAGCATTAAGGAAATAAAAGAGAATGGAAGGGCTAAGCAGGGTTCAAAAGTTATACATTAACTTATCCCAGNGTAAAAATACTTGAGCAATTGTAGCTATTGCTCATGCACTAAAAGTCCAGNGTAAAAATTTTAGNGCANAAATTGTAACCTTCCCAGTAGCACCACACATCACATCAAAGTAAAGATTGTGTCAATGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U568033" ref_strand="+" ref_description="SGN-U568033 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|157345534|emb|CAO14832.1| (e_value=4e-67) unnamed; (*ATH) AT5G40140.1 (e_value=7e-66)  Symbol: None | armadillo/beta-catenin repeat family protein / U-box domain-containing protein, contains Pfam domain, PF00514: Armadillo/beta-catenin-like repeats and Pfam, PF04564: U-box domain | chr5:16074575-16076227 FORWARD | Aliases: MSN9.4, MSN... ; (*SWP) sp|Q9FL17|PUB40_ARATH (e_value=6e-65) U-box domain-containing protein 40 OS=Arabidopsis thaliana GN=PUB40; ">
      <seq>catcacatctttttttatagattgtgtcaatggtacactctcttcattcttgctttcactgtttgagcatcaagatgctcaaaaatgaaaaacaactctggagttcattgcatttgctctgcagcaatgtttattgcaatgcagaccttaaagaaacatgagaataacaattctctaacaacttccgcagttgcagcaatcaatcaactccagcataaataccaaattactagacagcggcttgtggaagccacgaacagtgcatagaataagcctcaggcacacaagaaagtgaaaatcgcattgcttgaagagtattaggagacaatgagttcatgttaaagacagcctcttttctccaaaaactaaaacacactgttcagaatctttctttacacctccaacattatttaccatgtcaactgtcacatgacctcagaagacacgacgagcaaaaccaaaaccaaaatcatgctatccgaagctatgcaaagagaaaaccgtgcctaattacaagccatttctcagaaaaaggaatgaaatagcatacagtgaagaaacagaaacaaacaagagctatgaagaacttatccgtgcttgactgatatcatcatccgaattaagcaacttctcccaatcaacttcctcctcttcatccttctgcctcaaaacctccaatatctttctaactttatccttggccctttcacttcccatttcctcaacttgtatcaacagctcctccgcagcagcctcttttgccaaccctttaaacctaaggccaccatgactaagtccatataatgcagcaagacaattctcacgagtcgactccgattcaaactctccctttctcaacatacatacaaaacactccactgcacccccatcaagcattgctgctctcccttcagagctcgcagccaggttacaaagtatcaacagaatccgacccatcatatgacccgttttaaccatgcctagtaatgcctgaaccgccccgagtttcaccaatttagccctgttactctgaactaaagtgaggtgatatagagccagagccgaatcatgcctagttcgttccgattcagatcgaagggcatgaagaagtggaggcagagctcctaataccccaattgcagttttgttctgatcatctaacgctaaactgaaaagtgcaccagcaacatgttcctgtgattcttgggatccactttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0014P22.2" temp_strand="+" temp_description="C02SLm0014P22.2  AC215471.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0014P22 sequenced_by:kribb upload_account_name:korea">
        <position start="53486" stop="55288"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53786" g_stop="54988" g_length="1203"/>
          <reference_exon_boundary r_type="cDNA" r_start="16" r_stop="1218" r_length="1203" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0014P22.2" gen_strand="+" ref_id="SGN-U568033" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1203</cumulative_length_of_scored_exons>
        <coverage percentage="0.988" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0014P22.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U568033" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53786" e_stop="54988"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAGATTGTGTCAATGGTACACTCTCTTCATTCTTGCTTTCACTGTTTGAGCATCAAGATGCTCAAAAATGAAAAACAACTCTGGAGTTCATTGCATTTGCTCTGCAGCAATGTTTATTGCAATGCAGACCTTAAAGAAACATGAGAATAACAATTCTCTAACAACTTCCGCAGTTGCAGCAATCAATCAACTCCAGCATAAATACCAAATTACTAGACAGCGGCTTGTGGAAGCCACGAACAGTGCATAGAATAAGCCTCAGGCACACAAGAAAGTGAAAATAGCATTGCTTGAAGAGTATTAGGAGACAATGAGTTCATGTTAAAGACAGCCTCTTTTCTCCAAAAACTAAAACACACTGTTCAGAATCTTTCTTTACACCTCCAACATTATTTACCATGTCAACTGTCACATGACCTCAGAAGACACGACGAGCAAAACCAAAACCAAAATCATGCTATCCGAAGCTATGCAAAGAGAAAACCGTGCCTAATTACAAGCCATTTCTCAGAAAAAGGAATGAAATAGCATACAGTGAAGAAACAGAAACAAACAAGAGCTATGAAGAACTTATCCGTGCTTGACTGATATCATCATCCGAATTAAGCAACTTCTCCCAATCAACTTCCTCCTCTTCATCCTTCTGCCTCAAAACCTCCAATATCTTTCTAACTTTATCCTTGGCCCTTTCACTTCCCATTTCCTCAACTTGTATCAACAGCTCCTCCGCAGCAGCCTCTTTTGCCAACCCTTTAAACCTAAGGCCACCATGACTAAGTCCATATAATGCAGCAAGACAATTCTCACGAGTCGACTCCGATTCAAACTCTCCCTTTCTCAACATACATACAAAACACTCCACTGCACCCCCATCAAGCATTGCTGCTCTCCCTTCAGAGCTCGCAGCCAGGTTACAAAGTATCAACAGAATCCGACCCATCATATGACCCGTTTTAACCATGCCTAGTAATGCCTGAACCGCCCCGAGTTTCACCAATTTAGCCCTGTTACTCTGAACTAAAGTGAGGTGATATAGAGCCAGAGCCGAATCATGCCTAGTTCGTTCCGATTCAGATCGAAGGGCATGAAGAAGTGGAGGCAGAGCTCCTAATACCCCAATTGCAGTTTTGTTCTGATCATCTAACGCTAAACTGAAAAGTGCACCAGCAACATGTTCCTGTGATTCTTGGAATCCACTTTT</genome_strand>
        <mrna_strand>TATAGATTGTGTCAATGGTACACTCTCTTCATTCTTGCTTTCACTGTTTGAGCATCAAGATGCTCAAAAATGAAAAACAACTCTGGAGTTCATTGCATTTGCTCTGCAGCAATGTTTATTGCAATGCAGACCTTAAAGAAACATGAGAATAACAATTCTCTAACAACTTCCGCAGTTGCAGCAATCAATCAACTCCAGCATAAATACCAAATTACTAGACAGCGGCTTGTGGAAGCCACGAACAGTGCATAGAATAAGCCTCAGGCACACAAGAAAGTGAAAATCGCATTGCTTGAAGAGTATTAGGAGACAATGAGTTCATGTTAAAGACAGCCTCTTTTCTCCAAAAACTAAAACACACTGTTCAGAATCTTTCTTTACACCTCCAACATTATTTACCATGTCAACTGTCACATGACCTCAGAAGACACGACGAGCAAAACCAAAACCAAAATCATGCTATCCGAAGCTATGCAAAGAGAAAACCGTGCCTAATTACAAGCCATTTCTCAGAAAAAGGAATGAAATAGCATACAGTGAAGAAACAGAAACAAACAAGAGCTATGAAGAACTTATCCGTGCTTGACTGATATCATCATCCGAATTAAGCAACTTCTCCCAATCAACTTCCTCCTCTTCATCCTTCTGCCTCAAAACCTCCAATATCTTTCTAACTTTATCCTTGGCCCTTTCACTTCCCATTTCCTCAACTTGTATCAACAGCTCCTCCGCAGCAGCCTCTTTTGCCAACCCTTTAAACCTAAGGCCACCATGACTAAGTCCATATAATGCAGCAAGACAATTCTCACGAGTCGACTCCGATTCAAACTCTCCCTTTCTCAACATACATACAAAACACTCCACTGCACCCCCATCAAGCATTGCTGCTCTCCCTTCAGAGCTCGCAGCCAGGTTACAAAGTATCAACAGAATCCGACCCATCATATGACCCGTTTTAACCATGCCTAGTAATGCCTGAACCGCCCCGAGTTTCACCAATTTAGCCCTGTTACTCTGAACTAAAGTGAGGTGATATAGAGCCAGAGCCGAATCATGCCTAGTTCGTTCCGATTCAGATCGAAGGGCATGAAGAAGTGGAGGCAGAGCTCCTAATACCCCAATTGCAGTTTTGTTCTGATCATCTAACGCTAAACTGAAAAGTGCACCAGCAACATGTTCCTGTGATTCTTGGGATCCACTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U581762" ref_strand="+" ref_description="SGN-U581762 Tomato 200607#2 [4 ESTs aligned] (*GB) gi|147852951|emb|CAN81267.1| (e_value=2e-72) hypothetical; (*ATH) AT5G40140.1 (e_value=8e-64)  Symbol: None | armadillo/beta-catenin repeat family protein / U-box domain-containing protein, contains Pfam domain, PF00514: Armadillo/beta-catenin-like repeats and Pfam, PF04564: U-box domain | chr5:16074575-16076227 FORWARD | Aliases: MSN9.4, MSN... ; (*SWP) sp|Q9FL17|PUB40_ARATH (e_value=7e-63) U-box domain-containing protein 40 OS=Arabidopsis thaliana GN=PUB40; ">
      <seq>gcgagtacagagctctcagtactaaacatccaattttctgtttcactatcagcttcctctctccaaatctcagtctgtcataatgaagatgtacacttttgctcatctcctcaacaggctcaaagttgaatttttgaaaccttttgttttcattcatatttgaacctcaaagattgaatcttgaaacttctttttttttttcttcattgaaatgggtacaagcaagcaaagatggagaatttcatttcacaagtctccatcaaaacaacctcctattcctatagaatttgtctgtcctatttctggttctctcatggctgaccctgtaatcgtttcttcaggccatacttttgagcgtcattgtgttcatgcctgcaaatcactttcttttacccctgttcttcctgatggctctgttcctgatttctctactgtgatccctaacttagctctcaagtctacaatcctcaatttttgccgttcttcttttcttgacccaccaaaacccatcaattttctcacagctgaaaatctcgttttcacattgaaggccacccgaaaaccccaagatgctacaagatttaatggcgtccgggttatgcagacggaaactgaactgaaccgggtaccgagtcacatatcaatgagttcagaggaatctgtgactcctagaagtggacccacttattactcttcgtcgtcagcctctgactttgaaaccctaaacccaaattcctttgaagaagatgaactacttgtgaaattgaagagttcccaaatatctgaacaagaagaagctgtcatctcgtttcgaaaattgacccgaacccgtgaagaaacccggttccagttatgcactccgcgtatactttcagctctacgtgtactcatcacttcaaggtatgtttctgtacaagtaaattcagtagcggcattggtaaatttgtcgttagagaatcgaaacaaggtgaaaatttttacggtctggaattgttccgtcctttattgacgtgttgaaaagtggattccaagaatcacaggaacatgttgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0014P22.2" temp_strand="-" temp_description="C02SLm0014P22.2  AC215471.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0014P22 sequenced_by:kribb upload_account_name:korea">
        <position start="56302" stop="54653"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="56003" g_stop="54953" g_length="1051"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1052" r_length="1052" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0014P22.2" gen_strand="-" ref_id="SGN-U581762" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>1051</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0014P22.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U581762" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="56003" e_stop="54953"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACGAGTACAGAGCTCTCAGTACTAAACATCCAATTTTCTGTTTCACTATCAGCTTCCTCTCTCCAAATCTCAGTCTGTCATAATGAAGATGTACACTTTTGCTCATCTCCTCAACAGGCTCAAAGTTGAATTTTTGAAACCTTTTGTTTTCATTCATATTTGAACCTCAAAGATTGAATCTTGAAACTTCTTTTTTTTTTTCTTCATTGAAATGGGTACTAGCAAGCAAAGATGGAGAATTTCATTTCACAAGTCTCCATCAAAACAACCTCCTATTCCTATAGAATTTGTCTGTCCTATTTCTGGTTCTCTCATGGCTGACCCTGTAATCGTTTCTTCAGGCCATACTTTTGAGCGTCATTGTGTTCATGCCTGCAAATCACTTTCTTTTACCCCTGTTCTTCCTGATGGCTCTGTTCCTGATTTCTCTACTGTGATCCCTAACTTAGCTCTCAAGTCTACAATCCTCAATTTTTGCCGTTCTTCTTTTCTTGACCCACCAAAACCCATCAATTTTCTCACAGCTGAAAATCTCGTTTTCACATTGAAGGCCACCCGAAAACCCCAAGATGCTACAAGATTTAATGGCGTCCGGGTTATGCAGACGGAAACTGAACTGAACCGGGTACCGAGTCACATATCAATGAGTTCAGAGGAATCTGTGACTCCTAGAAGTGGACCCACTTATTACTCTTCGTCGTCAGCCTCTGACTTTGAAACCCTAAACCCAAATTCCTTTGAAGAAGATGAACTACTTGTGAAATTGAAGAGTTCCCAAATATCTGAACAAGAAGAAGCTGTCATCTCGTTTCGAAAATTGACCCGAACCCGTGAAGAAACCCGGTTCCAGTTATGCACTCCGCGTATACTTTCAGCTCTACGTGTACTCATCACTTCAAGGTATGTTTCTGTACAAGTAAATTCAGTAGCGGCATTGGTAAATTTGTCGTTAGAGAATCGAAACAAGGTGAAAA-TTTTACGGTCTGGAATTGTTCCGTCTTTGATTGACGTGTTGAAAAGTGGATTCCAAGAATCACAGGAACATGTTGCT</genome_strand>
        <mrna_strand>GCGAGTACAGAGCTCTCAGTACTAAACATCCAATTTTCTGTTTCACTATCAGCTTCCTCTCTCCAAATCTCAGTCTGTCATAATGAAGATGTACACTTTTGCTCATCTCCTCAACAGGCTCAAAGTTGAATTTTTGAAACCTTTTGTTTTCATTCATATTTGAACCTCAAAGATTGAATCTTGAAACTTCTTTTTTTTTTTCTTCATTGAAATGGGTACAAGCAAGCAAAGATGGAGAATTTCATTTCACAAGTCTCCATCAAAACAACCTCCTATTCCTATAGAATTTGTCTGTCCTATTTCTGGTTCTCTCATGGCTGACCCTGTAATCGTTTCTTCAGGCCATACTTTTGAGCGTCATTGTGTTCATGCCTGCAAATCACTTTCTTTTACCCCTGTTCTTCCTGATGGCTCTGTTCCTGATTTCTCTACTGTGATCCCTAACTTAGCTCTCAAGTCTACAATCCTCAATTTTTGCCGTTCTTCTTTTCTTGACCCACCAAAACCCATCAATTTTCTCACAGCTGAAAATCTCGTTTTCACATTGAAGGCCACCCGAAAACCCCAAGATGCTACAAGATTTAATGGCGTCCGGGTTATGCAGACGGAAACTGAACTGAACCGGGTACCGAGTCACATATCAATGAGTTCAGAGGAATCTGTGACTCCTAGAAGTGGACCCACTTATTACTCTTCGTCGTCAGCCTCTGACTTTGAAACCCTAAACCCAAATTCCTTTGAAGAAGATGAACTACTTGTGAAATTGAAGAGTTCCCAAATATCTGAACAAGAAGAAGCTGTCATCTCGTTTCGAAAATTGACCCGAACCCGTGAAGAAACCCGGTTCCAGTTATGCACTCCGCGTATACTTTCAGCTCTACGTGTACTCATCACTTCAAGGTATGTTTCTGTACAAGTAAATTCAGTAGCGGCATTGGTAAATTTGTCGTTAGAGAATCGAAACAAGGTGAAAATTTTTACGGTCTGGAATTGTTCCGTCCTTTATTGACGTGTTGAAAAGTGGATTCCAAGAATCACAGGAACATGTTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U585267" ref_strand="+" ref_description="SGN-U585267 Tomato 200607#2 [21 ESTs aligned] (*GB) gi|147852952|emb|CAN81268.1| (e_value=3e-46) hypothetical; (*ATH) AT3G28210.1 (e_value=1e-44) | Symbol: None | zinc finger (AN1-like) family protein, contains Pfam profile: PF01428 AN1-like zinc finger | chr3:10521758-10522769 FORWARD | Aliases: T19D11.2; (*SWP) sp|Q67YE6|SAP12_ARATH (e_value=1e-43) Zinc finger AN1 domain-containing stress-associated protein 12 OS=Arabidopsis thaliana GN=SAP12; ">
      <seq>cggccgggggaggcaactagaaaaacaaaaatacacgaaagaagaaaatggaaggaggaacagaagcctatccagatttaggtagacattgccaactatctgattgccatcaactcgattttctcccttttacctgccatgcctgtttaaaggtattttgtgtggaacatagatcatgcaagtctcatgaatgcccaaaatctgactttaacagccgaatcgttttggtttgcgaaatttgttctatgtccatggaaactaccggctgtaaagttgaagaccacaaagcaatattacaaaaacacgaggaatctggggattgtgaccctaagaagaagaagaagaaacctacctgtcctgtcaaaagatgcaaggggattttgaccttctcaaacactagcacttgcaagatatgccggattcaagtttgcctcagacacaggttccctgctgatcacgcctgtaaccccacttcttcatcatcacagctgttgctaaaggaacccaataacaagtttttgactgctttgcttgcaaggaatgggaaagattgtgggaataaaagtcgtgcctcatctccaagccctgcgaacccttctgtgaaagcttgttgatcgtttcacagcacattactattcatttgtcttttgtaattacattattttatggaaaacaatgttgttctattttcaatttctccctcccttctatgataaaacaacgaatttaagaatgacataacaattcgggaatcaaaaaaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0014P22.2" temp_strand="+" temp_description="C02SLm0014P22.2  AC215471.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0014P22 sequenced_by:kribb upload_account_name:korea">
        <position start="60839" stop="62293"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61141" g_stop="61280" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="13" r_stop="152" r_length="140" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="61281" i_stop="61386" i_length="106">
            <donor d_prob="0.947" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="61387" g_stop="61996" g_length="610"/>
          <reference_exon_boundary r_type="cDNA" r_start="153" r_stop="763" r_length="611" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0014P22.2" gen_strand="+" ref_id="SGN-U585267" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>750</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0014P22.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U585267" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61141" e_stop="61280"/>
          <exon e_start="61387" e_stop="61996"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAACTAGAAGAACAAAAATACACGAAAGAAGAAAATGGAAGGAGGAACAGAAGCCTATCCAGATTTAGGTAGACATTGCCAACTATCTGATTGCCATCAACTCGATTTTCTCCCTTTTACCTGCCATGCCTGTTTAAAGGTTTGCCACTTTTATCCGTCCACCTTCACTTTGCGATTTTGCTTTTGGACATACACTACTGTATAAAATATTCAAAGGTTTTGATAATCATTGTTGCGATGTGCAGGTATTTTGTGTGGAACATAGATCATGCAAGTCTCATGAATGCCCAAAATCTGACTTTAACAGCCGAATCGTTTTGGTTTGCGAAATTTGTTCTATGTCCATGGAAACTACCGGCTGTAAAGTTGAAGACCACAAAGCAATATTACAAAAACACGAGGAATCTGGGGATTGTGACCCTAAGAAGAAGAAGAAGAAACCTACCTGTCCTGTCAAAAGATGCAAGGGGATTTTGACCTTCTCAAACACTAGCACTTGCAAGATATGCCGGATTCAAGTTTGCCTCAGACACAGGTTCCCTGCTGATCACGCCTGTAACCCCACTTCTTCATCATCACAGCTGTTGCTAAAGGAACCCAATAACAAGTTTTTGACTGCTTTGCTTGCAAGGAATGGGAAAGATTGTGGGAATAAAAGTCGTGCCTCATCTCCAAGCCCTGCGAACCCTTCTGTGAAAGCTTGTTGATCGTTTCACAGCACATTACTATTCATTTGTCTTTTGTAATTACATTATTTTATGGAAAACAATGTTGTTCTATTTTCAATTTCTCCCTCCCTTCTATGATAAAACAACGAATTTAAGAATGACATAACAATTC-GGAATCATATAATCT</genome_strand>
        <mrna_strand>GCAACTAGAAAAACAAAAATACACGAAAGAAGAAAATGGAAGGAGGAACAGAAGCCTATCCAGATTTAGGTAGACATTGCCAACTATCTGATTGCCATCAACTCGATTTTCTCCCTTTTACCTGCCATGCCTGTTTAAAG..........................................................................................................GTATTTTGTGTGGAACATAGATCATGCAAGTCTCATGAATGCCCAAAATCTGACTTTAACAGCCGAATCGTTTTGGTTTGCGAAATTTGTTCTATGTCCATGGAAACTACCGGCTGTAAAGTTGAAGACCACAAAGCAATATTACAAAAACACGAGGAATCTGGGGATTGTGACCCTAAGAAGAAGAAGAAGAAACCTACCTGTCCTGTCAAAAGATGCAAGGGGATTTTGACCTTCTCAAACACTAGCACTTGCAAGATATGCCGGATTCAAGTTTGCCTCAGACACAGGTTCCCTGCTGATCACGCCTGTAACCCCACTTCTTCATCATCACAGCTGTTGCTAAAGGAACCCAATAACAAGTTTTTGACTGCTTTGCTTGCAAGGAATGGGAAAGATTGTGGGAATAAAAGTCGTGCCTCATCTCCAAGCCCTGCGAACCCTTCTGTGAAAGCTTGTTGATCGTTTCACAGCACATTACTATTCATTTGTCTTTTGTAATTACATTATTTTATGGAAAACAATGTTGTTCTATTTTCAATTTCTCCCTCCCTTCTATGATAAAACAACGAATTTAAGAATGACATAACAATTCGGGAATCAAAAAAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U581972" ref_strand="+" ref_description="SGN-U581972 Tomato 200607#2 [12 ESTs aligned] (*GB) gi|147852953|emb|CAN81269.1| (e_value=2e-53) hypothetical; (*ATH) AT1G70180.2 (e_value=4e-16) | Symbol: None | sterile alpha motif (SAM) domain-containing protein, contains Pfam profile PF00536: SAM domain (Sterile alpha motif) | chr1:26430109-26433024 FORWARD | Aliases: None; ">
      <seq>gacgtgtcatggagaccagtagacaaaataaatgaggaaaaagaggagggacaattcttatagcgaccttgctcgctgagttttggagtatagacatatggagtataaccagatttagctgtgcataagttttgaccatctcaaatgtcaaggccacaggtcaccatcactttgggacgctcgggtcaagtaagctttctccactgtttttccagatttagctgtgcataagttttgaccatctcaaatgtcaaggccacaggtcaccatcactttgggacgctcgggtcaaaaagtggttaagcgatcatcagcttctcagggtaatggttttagtcaacagacattgtcaagaggcaaaaggtcattaggagagacctataggactgactctgaggatcctacaaaatcccttcgtaaacgtgtgcgaggggataaagatgcaggaggttccagatatggcagacagaatggtgcacgcattgggaaaaatgacctccgactgaaactaatgcacagaagaaggcaaagggaaattcatctgcagattgaagaaagaaaaaaggagcagcataagaggatgacaagaagtgttcaatctgcagaacaatctcacaagaggcttgtcaccagcagccaaccgtcgtcaggagctagcgaattgcttcagatagaggcaattagatcctcctatacatcacaaactgctgctggtgttagatcaagatccccttatagacttgcaaacgattctaaagaagtctcttcttcaaggaatatcactgcagctcagcatgtaccgtcagtaaggccagccgaagcttcaagaatggttcatatggcaggatatgacctcatcgactcttctcagctaaaagtccttacccctgtgaccatgaggtcagcactgggtgccaggaatccattgacaggtcttccctctgcaaatggaggcatgctacacagaccatatcctgatcaacctcctttgaccgttgccagtctattaaattcgctcggtttggggaaatacactatccactttcaagccgaggaggtagacatggctgcactgaagcaaatgggggaccgtgacctgaaggaattggggataccaatgggacccaggaagaagattctcttggctatgctttcccaaacttagaagacctgtgtagtatggtagttatatttattcaattcaatgctcctgtttctaagctgaagttatcaagctggctgttcttgggaaatgtatataaagggtagcggtataatgctggagtatttggctgatatttgttgtataatagacagtatataacagtgaaattatctctttcgtttttgggagaggctgatctttttgtgaatttattttagagaactgttcaacatgagatgcggtttgaagttattcatatagagaagattatatgattccgaattgttatgtcattct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0014P22.2" temp_strand="-" temp_description="C02SLm0014P22.2  AC215471.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0014P22 sequenced_by:kribb upload_account_name:korea">
        <position start="66290" stop="61664"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65990" g_stop="65879" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="112" r_length="112" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="65878" i_stop="65784" i_length="95">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.946" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="65783" g_stop="65478" g_length="306"/>
          <reference_exon_boundary r_type="cDNA" r_start="113" r_stop="423" r_length="311" r_score="0.837"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="65477" i_stop="65322" i_length="156">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.874" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="65321" g_stop="65272" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="424" r_stop="473" r_length="50" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="65271" i_stop="65152" i_length="120">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="65151" g_stop="64649" g_length="503"/>
          <reference_exon_boundary r_type="cDNA" r_start="474" r_stop="976" r_length="503" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="64648" i_stop="63826" i_length="823">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="63825" g_stop="63745" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="977" r_stop="1057" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="63744" i_stop="62609" i_length="1136">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="62608" g_stop="62546" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="1058" r_stop="1120" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="62545" i_stop="62306" i_length="240">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.925" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="62305" g_stop="61964" g_length="342"/>
          <reference_exon_boundary r_type="cDNA" r_start="1121" r_stop="1462" r_length="342" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0014P22.2" gen_strand="-" ref_id="SGN-U581972" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>1457</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0014P22.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U581972" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65990" e_stop="65879"/>
          <exon e_start="65783" e_stop="65478"/>
          <exon e_start="65321" e_stop="65272"/>
          <exon e_start="65151" e_stop="64649"/>
          <exon e_start="63825" e_stop="63745"/>
          <exon e_start="62608" e_stop="62546"/>
          <exon e_start="62305" e_stop="61964"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACGTGTCATGGAGACCAGTAGACAAAATAAATGAGGAAAAAGAGGAGGGACAATTCTTATAGCGACCTTGCTCGCTGAGTTTTGGAGTATAGACATATGGAGTATAACCAGGTAGGTATCTCATTCTCTTTCACCTCCCATTTTTTAGGGTTCCTTCATTTCTATTGACTATCGATTGTTGCATCTTGTTGCTGCAATCCTTTCAGATTTAGCTGTGCATAAGTTTTGACCATCTCAAATGTCAAGGCCACAGGTCACCATCACTTTGGGACGCTCGGGTCAAGTAAGCTTTCTCCACTGTTTTT-C-GCTTTA--TG-G-ATCTGTTTGGAGGTTTCTTAATTGT-GGGTTCA-ATTTTTTC-TTAATTTGTTACTGTTAAACTTGCAGAAAGTGGTTAAGCGATCATCAGCTTCTCAGGGTAATGGTTTTAGTCAACAGACATTGTCAAGAGGCAAAAGGTCATTAGGAGAGACCTATAGGACTGACTCTGAGGATCCTACAAAATCCCTTCGTAAACGGTAAAATCTTTTGTTTGTTGTTCTGGTTGAGCTAATGTAGGTTGTATCTAATTTATTGTTTTCAGAATAATGGAAGGAATATAAAAAAACTATCAAAGTTAGAGTGGTAGTTTTGATTTTATTTGATAGTGGAAGTTTTGCTATTGTTTTTGCAAGTGTGCGAGGGGATAAAGATGCAGGAGGTTCCAGATATGGCAGACAGAATGGTATTATCTGAAATATTTGTCATTACATGTTGTTTTGTTTTTTGGATGATTCCAGTTTCCTGTGTCATTCTTTGGTCTAGCATATTAGCTCATGTTTGGTACTGTTACTGTGATGTAAAGGTGCACGCATTGGGAAAAATGACCTCCGACTGAAACTAATGCACAGAAGAAGGCAAAGGGAAATTCATCTGCAGATTGAAGAAAGAAAAAAGGAGCAGCATAAGAGGATGACAAGAAGTGTTCAATCTGCAGAACAATCTCACAAGAGGCTTGTCACCAGCAGCCAACCGTCGTCAGGAGCTAGCGAATTGCTTCAGATAGAGGCAATTAGATCCTCCTATACATCACAAACTGCTGCTGGTGTTAGATCAAGATCCCCTTATAGACTTGCAAACGATTCTAAAGAAGTCTCTTCTTCAAGGAATATCACTGCAGCTCAGCATGTACCGTCAGTAAGGCCAGCCGAAGCTTCAAGAATGGTTCATATGGCAGGATATGACCTCATCGACTCTTCTCAGCTAAAAGTCCTTACCCCTGTGACCATGAGGTCAGCACTGGGTGCCAGGAATCCATTGACAGGTCTTCCCTCTGCAAATGGAGGCATGCTACACAGACCATATCCTGTACGAACCTACTTATTGTTCATCTTACTGAATTTCTATCTTGAATCATTGCTGGTAGAATTCTTGTCTTATCTTGAACTGGATAACTGAAGTAGGTATTTTATGTGACATTCAAGATCATGAGCTCGGCTGTAACCTCTTTAGTATTTTATGTGACACTCAAGATCATGAGCTCGGCTGTAACCTCTTTAGTTGTTCTCCTTCTGGGGAACAACACAGACAGTGTTACTTAAACTAGCAGATCAGTTTTTACTCGAGATAGTTTTTCTGGCTCTACTCCACCCTGACATGCTTCCTGCTATTTTTTGTCAAGCCAAATTGTTGCCTATATTTTCTCTGTATGCTGGACTTTAGCACTGCTTATATTTAAAATGACAGATTGCTGATGGAAGTTAAATTACTATGGCATTGTTTGACCATGTTCAAGAATTGCCTTGGTTGCTAATGCTCATTGGAAATTTCTTTTGTCTGCGTTGTTTTACTATTATCTGTGTGATTTTCCTACAATTTTTTCTATTTCTCCTTCCTGCAACATAGCATTCTTTGCATTCCTTTGAATGATATTGAAATTTCAGGGAGTTATATTGAAAACTTTTATGTTTATTCATATGTCAATATTTCTGCATTGCTTGTCAACAAAGTCCAAATTAGTTGTTAGTTCTCACAATTAATGTCTTTCTCATAACACCATCTTTTCTTAGCTACTATGGATTTTTGTCTCATTTCCCTTTATGCCTGGTATGAAGGAGAAGGGAAGAAATATTTGTAAATGGACAGAATTTATATGAATATCTTAAACATTGTTCTATCTGGTGTTGTACAGGATCAACCTCCTTTGACCGTTGCCAGTCTATTAAATTCGCTCGGTTTGGGGAAATACACTATCCACTTTCAAGCCGAGGAGGTGAATAGTACTATTGTTAAATGATGAAGCACATGTTTTAGTTTTTATATCGTTTCTTTGTTATTACATTATCTCAGCATTATGAGCATTTTAAATATCAATTCTGGTACTGTGGCTGAAAAAGTCTCAAGGCTGAACTAGATTTCACTGCAAAAAGTAACAAGGTCATGGCATGTAGTTTCATGTTGAATAGAGAACCTTCTCGTCTTCACAATAAAAGGATTATTTTTTATGAGGAGCAAGATAAAATGGTACTTAATATTCTGCATTAAATCTTTTCTCCTGGTGTACTTGATTCCTATTGCACACATATATACAGTTAGCAGGCTGCTCATTATTTAGAGAAGTACCTTCTGTTATGTGGTGCGGTGGCGGAGGAGCCAGGAATTCAAAGAAAGTTCTTTTGCCATAGAGATTCAACAGCTCAAATATATACAAAAAAATGGTTCTTCCCTATCTACAGTGTAGTTTTTCAATGGAGGGGGTTCAATTGATTCCCCTTGCACCCTGGTGTGATGAATATGTTATGTGACAAATCTTCTAATAGTTGGTTAGATTTACGTGTTCGAACCCAAATCAATCTTTGAAGTTTCTTCGTTTGTCTGCATCACAAATTAATTATGTCACATGTTACTTATCCCATGACATTTCCTATTTAGTCCATTTGATCTACCTCTTTGTCTGTCCTCCCAACTAATCAACTTGTTAATAGATACATTACGGGCCTTTCAAATTCTTTACATAAATGTCTTTTGTTGTTTATAATGCCTCCTGAGGTATTATTTGTCACCTCGAAGCCCTTCATCTCTTCTGTTGTCCTCCTGTCTGATCATGTGCTCATCTTGGACTTCTAATATGAGATTATTACTTGTGTAAAGGATAGTAGCCTCACTGCTGTTCACAAATTGAAAGTTGCACCATTGGCCCATAACATTCTCAATCATCCTGTATTTTCCCCATCCATGTCCTTAGTGACACGGTTCAACTGAATAATCAGCCCATCTCTTTTATCTGTTTGTTCACGTGCCTCGCTTAATGTTTTTGATTAAGTGATTTAGTTAACTTTGCCAAGAACCTGAGATATCCTAGTTCAACTCCTTTCTTTAGTGATGTGATGCCTGTTTTACCCATTTCAGGTAGACATGGCTGCACTGAAGCAAATGGGGGACCGTGACCTGAAGGAATTGGGGATACCAATGGTACGTGTTGTTTCAGTCACCTTATTTGGAGGATCACACTGTTCACAAATTCTACTGCAAGTTCATATATGCTAATTTTGCTATGCATGGTGACACCTATTCACTTCCCTGAAAATAATGGGATATTATCTCGTTGGGGTGGGAAGAAGGCTAAGCTTCTCTTGATTATACTGAACTGTTGGATAGTTGCTACGCTTGTCCCATTTTAGCCTCTAATTGTTGCATTCTGGGGATTTGCAGGGACCCAGGAAGAAGATTCTCTTGGCTATGCTTTCCCAAACTTAGAAGACCTGTGTAGTATGGTAGTTATATTTATTCAATTCAATGCTCCTGTTTCTAAGCTGAAGTTATCAAGCTGGCTGTTCTTGGGAAATGTATATAAAGGGTAGCGGTATAATGCTGGAGTATTTGGCTGATATTTGTTGTATAATAGACAGTATATAACAGTGAAATTATCTCTTTCGTTTTTGGGAGAGGCTGATCTTTTTGTGAATTTATTTTAGAGAACTGTTCAACATGAGATGCGGTTTGAAGTTATTCATATAGAGAAGATTATATGATTCCGAATTGTTATGTCATTCT</genome_strand>
        <mrna_strand>GACGTGTCATGGAGACCAGTAGACAAAATAAATGAGGAAAAAGAGGAGGGACAATTCTTATAGCGACCTTGCTCGCTGAGTTTTGGAGTATAGACATATGGAGTATAACCAG...............................................................................................ATTTAGCTGTGCATAAGTTTTGACCATCTCAAATGTCAAGGCCACAGGTCACCATCACTTTGGGACGCTCGGGTCAAGTAAGCTTTCTCCACTGTTTTTCCAGATTTAGCTGTGCATAAGTTTTGA-CCATCTCAAATGTCAAGGCCACAGGTCACCATCACTTTGGGAC-GCT-CGGGT-CAAAAAGTGGTTAAGCGATCATCAGCTTCTCAGGGTAATGGTTTTAGTCAACAGACATTGTCAAGAGGCAAAAGGTCATTAGGAGAGACCTATAGGACTGACTCTGAGGATCCTACAAAATCCCTTCGTAAACG............................................................................................................................................................TGTGCGAGGGGATAAAGATGCAGGAGGTTCCAGATATGGCAGACAGAATG........................................................................................................................GTGCACGCATTGGGAAAAATGACCTCCGACTGAAACTAATGCACAGAAGAAGGCAAAGGGAAATTCATCTGCAGATTGAAGAAAGAAAAAAGGAGCAGCATAAGAGGATGACAAGAAGTGTTCAATCTGCAGAACAATCTCACAAGAGGCTTGTCACCAGCAGCCAACCGTCGTCAGGAGCTAGCGAATTGCTTCAGATAGAGGCAATTAGATCCTCCTATACATCACAAACTGCTGCTGGTGTTAGATCAAGATCCCCTTATAGACTTGCAAACGATTCTAAAGAAGTCTCTTCTTCAAGGAATATCACTGCAGCTCAGCATGTACCGTCAGTAAGGCCAGCCGAAGCTTCAAGAATGGTTCATATGGCAGGATATGACCTCATCGACTCTTCTCAGCTAAAAGTCCTTACCCCTGTGACCATGAGGTCAGCACTGGGTGCCAGGAATCCATTGACAGGTCTTCCCTCTGCAAATGGAGGCATGCTACACAGACCATATCCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAACCTCCTTTGACCGTTGCCAGTCTATTAAATTCGCTCGGTTTGGGGAAATACACTATCCACTTTCAAGCCGAGGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGACATGGCTGCACTGAAGCAAATGGGGGACCGTGACCTGAAGGAATTGGGGATACCAATG................................................................................................................................................................................................................................................GGACCCAGGAAGAAGATTCTCTTGGCTATGCTTTCCCAAACTTAGAAGACCTGTGTAGTATGGTAGTTATATTTATTCAATTCAATGCTCCTGTTTCTAAGCTGAAGTTATCAAGCTGGCTGTTCTTGGGAAATGTATATAAAGGGTAGCGGTATAATGCTGGAGTATTTGGCTGATATTTGTTGTATAATAGACAGTATATAACAGTGAAATTATCTCTTTCGTTTTTGGGAGAGGCTGATCTTTTTGTGAATTTATTTTAGAGAACTGTTCAACATGAGATGCGGTTTGAAGTTATTCATATAGAGAAGATTATATGATTCCGAATTGTTATGTCATTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U581973" ref_strand="+" ref_description="SGN-U581973 Tomato 200607#2 [2 ESTs aligned] ">
      <seq>gcatatggagtataaccagatttagctgtgcataagttttgaccatctcaaatgtcaaggccacaggtcaccatcactttgggacgctcgggtcaaaaagtggttaagcgatcatcagcttctcagggtaatggttttagtcaacagacattgtcaagaggcaaaaggtcattaggagagacctataggactgactctgaggatcctacaaaatcccttcgtaaacggtaaaatcttttgtttgttgttctggttgagctaatgtaggttgtatctaatttattgttttcagaataatggaaggaatataaaaaaactatcaaagttagagtggtagttttgattttatttgatagtggaagttttgctattgtttttgcaagtgtgcgaggggataaagatgcaggaggttccagatatggcagacagaatggtgcacgcattgggaaaaatgacctccgactgaaactaatgcacagaagaaggcaaagggaaattcatctgcagattgaaaaaagaaaaaaggagcagcataagaggatgacaagaagtgttcaatctgcagaacaatctcacaagaggcttgtcaccagcagccaaccgtcgtcaggagctagcgaattgcttcagatagaggcaattagatcctcctatacatcacaaactgctgctggtgttagatcaagatccccttatagacttgcaaacgattctaaagaagtctcttcttcaaggaatatcactgcagctcagcatgtaccgtcagtaaggccagccgaagcttcaagaatggttcatatggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0014P22.2" temp_strand="-" temp_description="C02SLm0014P22.2  AC215471.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0014P22 sequenced_by:kribb upload_account_name:korea">
        <position start="66196" stop="64482"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65897" g_stop="65879" g_length="19"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="19" r_length="19" r_score="0.947"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="65878" i_stop="65784" i_length="95">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.946" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="65783" g_stop="65707" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="20" r_stop="96" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="65706" i_stop="65609" i_length="98">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="65608" g_stop="65272" g_length="337"/>
          <reference_exon_boundary r_type="cDNA" r_start="97" r_stop="433" r_length="337" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="65271" i_stop="65152" i_length="120">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="65151" g_stop="64782" g_length="370"/>
          <reference_exon_boundary r_type="cDNA" r_start="434" r_stop="803" r_length="370" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0014P22.2" gen_strand="-" ref_id="SGN-U581973" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>803</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0014P22.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U581973" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65897" e_stop="65879"/>
          <exon e_start="65783" e_stop="65707"/>
          <exon e_start="65608" e_stop="65272"/>
          <exon e_start="65151" e_stop="64782"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACATATGGAGTATAACCAGGTAGGTATCTCATTCTCTTTCACCTCCCATTTTTTAGGGTTCCTTCATTTCTATTGACTATCGATTGTTGCATCTTGTTGCTGCAATCCTTTCAGATTTAGCTGTGCATAAGTTTTGACCATCTCAAATGTCAAGGCCACAGGTCACCATCACTTTGGGACGCTCGGGTCAAGTAAGCTTTCTCCACTGTTTTTCGCTTTATGGATCTGTTTGGAGGTTTCTTAATTGTGGGTTCAATTTTTTCTTAATTTGTTACTGTTAAACTTGCAGAAAGTGGTTAAGCGATCATCAGCTTCTCAGGGTAATGGTTTTAGTCAACAGACATTGTCAAGAGGCAAAAGGTCATTAGGAGAGACCTATAGGACTGACTCTGAGGATCCTACAAAATCCCTTCGTAAACGGTAAAATCTTTTGTTTGTTGTTCTGGTTGAGCTAATGTAGGTTGTATCTAATTTATTGTTTTCAGAATAATGGAAGGAATATAAAAAAACTATCAAAGTTAGAGTGGTAGTTTTGATTTTATTTGATAGTGGAAGTTTTGCTATTGTTTTTGCAAGTGTGCGAGGGGATAAAGATGCAGGAGGTTCCAGATATGGCAGACAGAATGGTATTATCTGAAATATTTGTCATTACATGTTGTTTTGTTTTTTGGATGATTCCAGTTTCCTGTGTCATTCTTTGGTCTAGCATATTAGCTCATGTTTGGTACTGTTACTGTGATGTAAAGGTGCACGCATTGGGAAAAATGACCTCCGACTGAAACTAATGCACAGAAGAAGGCAAAGGGAAATTCATCTGCAGATTGAAGAAAGAAAAAAGGAGCAGCATAAGAGGATGACAAGAAGTGTTCAATCTGCAGAACAATCTCACAAGAGGCTTGTCACCAGCAGCCAACCGTCGTCAGGAGCTAGCGAATTGCTTCAGATAGAGGCAATTAGATCCTCCTATACATCACAAACTGCTGCTGGTGTTAGATCAAGATCCCCTTATAGACTTGCAAACGATTCTAAAGAAGTCTCTTCTTCAAGGAATATCACTGCAGCTCAGCATGTACCGTCAGTAAGGCCAGCCGAAGCTTCAAGAATGGTTCATATGGC</genome_strand>
        <mrna_strand>GCATATGGAGTATAACCAG...............................................................................................ATTTAGCTGTGCATAAGTTTTGACCATCTCAAATGTCAAGGCCACAGGTCACCATCACTTTGGGACGCTCGGGTCAA..................................................................................................AAAGTGGTTAAGCGATCATCAGCTTCTCAGGGTAATGGTTTTAGTCAACAGACATTGTCAAGAGGCAAAAGGTCATTAGGAGAGACCTATAGGACTGACTCTGAGGATCCTACAAAATCCCTTCGTAAACGGTAAAATCTTTTGTTTGTTGTTCTGGTTGAGCTAATGTAGGTTGTATCTAATTTATTGTTTTCAGAATAATGGAAGGAATATAAAAAAACTATCAAAGTTAGAGTGGTAGTTTTGATTTTATTTGATAGTGGAAGTTTTGCTATTGTTTTTGCAAGTGTGCGAGGGGATAAAGATGCAGGAGGTTCCAGATATGGCAGACAGAATG........................................................................................................................GTGCACGCATTGGGAAAAATGACCTCCGACTGAAACTAATGCACAGAAGAAGGCAAAGGGAAATTCATCTGCAGATTGAAAAAAGAAAAAAGGAGCAGCATAAGAGGATGACAAGAAGTGTTCAATCTGCAGAACAATCTCACAAGAGGCTTGTCACCAGCAGCCAACCGTCGTCAGGAGCTAGCGAATTGCTTCAGATAGAGGCAATTAGATCCTCCTATACATCACAAACTGCTGCTGGTGTTAGATCAAGATCCCCTTATAGACTTGCAAACGATTCTAAAGAAGTCTCTTCTTCAAGGAATATCACTGCAGCTCAGCATGTACCGTCAGTAAGGCCAGCCGAAGCTTCAAGAATGGTTCATATGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U577574" ref_strand="+" ref_description="SGN-U577574 Tomato 200607#2 [39 ESTs aligned] (*GB) gi|14275859|emb|CAC39620.1| (e_value=5e-81) ferredoxin-thioredoxin-reductase catalytic subunit B [Solanum tuberosum]; (*ATH) AT2G04700.1 (e_value=7e-61) | Symbol: None | ferredoxin thioredoxin reductase catalytic beta chain family protein, contains Pfam profile: PF02943 ferredoxin thioredoxin reductase catalytic beta | chr2:1646805-1648554 FORWARD | Aliases: F28I8.26, F28I8_26; (*SWP) sp|P41349|FTRC2_SPIOL (e_value=2e-62) Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic OS=Spinacia oleracea; ">
      <seq>gcccgtttattaatttattttaattataatttgtcttcagatattaggtgaaaagaaaaggagagaacggatagtaatatataaatatcaacgctgtacgaaagagattttttcctttccgaagttgtggtggttaacagaatcacatttttgactcaatcggaaagtcggagcagaaaacgagacaacgaagcaacaactaccggaatccgccatgagaactcttcaagcttccacctcctacagcgttggctttggaatttcatcttttgctactcgtcctaagccttcttctactcatcgctgcctcaccgtagccaaaatggagccatcagagaaatctgttgaaatcatgaggaaattctcggagcagtatgctcgcaggtcagaaacatatttctgcatggacaaaggtgttacttctgtggtcatcaagggtttggcagagcacaaggatacattgggtgctccactctgcccctgcaggcattatgatgacaaagctgcagaagcgcagcagggcttctggaattgtccgtgtgtaccaatgagagagaggaaggagtgtcactgcatgctttttctgacccctgataatgattttgctggagaagaacagacgattactatggaggagattaaggaaacaacagccaacatgtgatgctcggacatcttatacatgctatgaacattacgtttttgttgtacatgtatatttgagtattagatgaagagcaacaatccagttctgatgtgacatgttgctgaaaccccatccattacattgttgtgattctgatctcgtctagtgagattgggtgggtgaataacagtgcaattatgctaactgttgtgtgatgcatctagattgtatgagtcataactcatattaggggattttgggtggcttcagcttcagctaatgcaaatcctgattttgtataaaactggaatcaatttccaaaagctgctttgtgaagttcaatcccagtcgtctgacgtgttaataatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0014P22.2" temp_strand="-" temp_description="C02SLm0014P22.2  AC215471.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0014P22 sequenced_by:kribb upload_account_name:korea">
        <position start="73551" stop="67520"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73252" g_stop="72930" g_length="323"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="323" r_length="323" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="72929" i_stop="72360" i_length="570">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.959" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72359" g_stop="72247" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="324" r_stop="436" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="72246" i_stop="69388" i_length="2859">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.718" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="69387" g_stop="69338" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="437" r_stop="486" r_length="50" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="69337" i_stop="69208" i_length="130">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="69207" g_stop="69136" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="487" r_stop="558" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="69135" i_stop="68487" i_length="649">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.854" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="68486" g_stop="68426" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="559" r_stop="619" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="68425" i_stop="68216" i_length="210">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="68215" g_stop="67820" g_length="396"/>
          <reference_exon_boundary r_type="cDNA" r_start="620" r_stop="1015" r_length="396" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0014P22.2" gen_strand="-" ref_id="SGN-U577574" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1015</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0014P22.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U577574" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73252" e_stop="72930"/>
          <exon e_start="72359" e_stop="72247"/>
          <exon e_start="69387" e_stop="69338"/>
          <exon e_start="69207" e_stop="69136"/>
          <exon e_start="68486" e_stop="68426"/>
          <exon e_start="68215" e_stop="67820"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCCGTTTATTAATTTATTTTAATTATAATTTTTCTTCAGATATTAGGTGAAAAGAAAAGGAGAGAACGGATAGTAATATATAAATATCAACGCTGTACGAAAGAGATTTTTTCCTTTCCGAAGTTGTGGTGGTTAACAGAATCACATTTTTGACTCAATCGGAAAGTCGGAGCAGAAAACGAGACAACGAAGCAACAACTACCGGAATCCGCCATGAGAACTCTTCAAGCTTCCACCTCCTACAGCGTTGGCTTTGGAATTTCATCTTTTGCTACTCGTCCTAAGCCTTCTTCTACTCATCGCTGCCTCACCGTAGCCAAAAGTAATCATTGATCAACTTCCTACAGTTTATAGATTCTTCTTCTGATTTCCTCTCAGTTGCCATATTTTTGGAAATAAAATGCTTTGAACTAGTTTGTGTTTATTGAGTTCGTGCAACTGTGAATTCTGTTTTTGTATTCAATGTTATTTCGATTTCAGTGTTTTCTCTTTTCGATTTTGAGTTGTTAGTTTGCGTATGGCGATAAGATCCTGAAATTCGATCCATGGAGACTAATTGGATGTTAAAAGCGTTTCGAGCTTTAATTTCTTCACATTTAGTCTTGAGTTTAGAGTGTATATACTGCTGCTATAGCTCTTGAAGGCTCATTATAGTTATTTAGTCTTGAGTTTAGAGTGTATATACTGCTGTTATAGATCTTGAAGGCTCATTATAGTTACCAGGGATAAGCATCTATAGATTTATTTGTGATTTCTTCCGAGAAATGATAATAGTATTTATTCAGCTAGATCAAATATAATTGGGAAGATCAAATCAACGAAATCAGTAGAAGTTGATCTATTGATTTTACTGAAATGGCTAATTTCATGGGTGTGTTGTTTGCATATGTAGTGGAGCCATCAGAGAAATCTGTTGAAATCATGAGGAAATTCTCGGAGCAGTATGCTCGCAGGTCAGAAACATATTTCTGCATGGACAAAGGTGTTACTTCTGTGGTCATCAAGGTACTTTCTTTTCCCTTTCTCATCTAATGATATATTGTGCATTTACTATCCACACTCATATGTTTACGTCTTTAGTATGTGTTTCAAATCATATTTTCCATTTAATCTCAAGGTTTGACACTTGATTGTTCTTTTCTATTTTACTTAATGAGAATATGTTTTAGGGATTGAATTGGGACTGGGGCCTTTCGTCTCCATGAAAGCTGTCTTCGGTAGCTTCTTAATTTTGTTTTGTATTGCCGCTATAATTTTGTGACTGCTGCATTAGCACTAAACAGAGTGGGTTATTAACTCACTATTTCAGCTCGTGGTTTCTGTGTTAGCTGGTAAGTAAGTTACTGTAAAAGTAATAACTTTAATGTTGAAAATTTACCATTTCATGCAGATATTGTTTTTATGCTGTTAAATTGACCAAAAGTCATCAGTAAGCACAGTGCAGTCAGAGTACGACAACTTATACAAATGTTTTGAACGTTAGGATACTCCCTCCTAGGCTATAAAGTGAGAATTTATCGTATCTGCTTGGAAACTGTATTGTCGTTTTACTAACTCCAAGATAATGGCATTCTGTATACTTGAAGTTTAGGACAAGCTGCAAGTGTGTGATGTCATTTCAGTTCCAAAAAGTTGCTTCTATACTATAGCTGCTTGATTATTGTTGAATAGTATTTTGTTGCTCAGAAGTTCTACTTTGGTCTTATTACCTCATAAAAAAAAAAGTGATACCTTTGGTTTAGAGCTTGAATAGCCAATCACTTTTTCCCAGGTATCCTTCACTTTATATTTCAGGTTTAGGTGTGTGTTCGTGTATCTTCTAGAAGCATATTTCTATGTAAGTTCGTGAAAGTATGAATTTAAAATTGTGGAGCTGTGGAAACTCTTGAACTGAGGGGATATCAATTATCAAAGACTTATAATGAGAGATAAACAATAGCACAAAGCTAATTATATAATAAAGGACAGTTATACAAGGAATTTTTAACACAAAGAAGGGAATAAGAATTGAGAAACTTTTAATAATGTGAGTACAAGATTTACCATCTCATAAACAAGATAGAAGAATAGATTTTATCATCTCATAAACAAGATAGAAGAATAGATTTATCTCAAGTTTCAGAGAATGTGACTGTGACGGAGTTAATAGATTGCTAAATACAAGCCAATCACAAAGATCAATCCAACATGCTGTCCTTCTTTTGAGATGGAACAGGACAGAATTCAATCCTTTCTTTGTGAAGAGGCACTGGAAGCATCAATACCAATGGGCGCACCCACATAAGGGAAAGTCTTGTGATAATGTGGAAGGTGCTCTTCTAGACTGTGTTAGGTAGTTGAGGATCCTCTTGGTGTTCTTGGTTTTGTTGGGTTACATTCCGCAATTACTTATTGATAATAGCTATTAGCTACCCACCAATAAACAACTATAATGATAACGATATGATACCAAAAACATTAGAAATAACAACCGAGGTGAATGGGAAGTTGATGCCAAAAGAACATAGGTTTTTTCCCTCAGTTTCTGCACTCCTTGCTTTAACTTTAGAACTACAGCCAGCTCAATCCATTTTTCCATCCGATGATCTTCACCCTAGGACTGACTCTGTTCAACTTCCATGAAAATGATTTTAAAGCCTTATCCACATCAAAAGTACCCTATAGAAAGAAGTGAATCTTATATGCTACTATGATAAGTATCCTATTGGGTTTTGATAGAGAATCAAACATAAGGATGTATCCAAGGGTGTGACAGAACGTGGCTTATTAGTATCTTTTATTGGTTTGATGCATAGTGATTGTAAATGGTCATTATGACTTTTCCCTTTTGATGTTGGATGCTTAGTGTCTTATGAGGTTCTCCAAATTATATTGCTGTACAAAGAATAGAGCTATCACATTTTAGAAATTTGAATCGAGAACATACTAATGGAGTTTGTGGGCTGGACATGAATGTATGTATGTTATACAAAGACTCTATCAACAACAACAACATACTTGGTGTAATCCCACAAGTGAGGTCAGGTGAGGTCAGGGGAGGGTAGTGTGTATGCAAACCTTACAAGCATTCTTAAAAGAAAAGGAACAATAGCTATAACAAATAATACTACAGTCGAAGTACAAGAAATAGCATATAGTAGTATAAATCGCCGAAGAAGAAACTACAAGTCACATGCATGCAAAGTACCAAAAGTATCCTTGTAAATGAGTAATGGTTAGAGTTACCACATATCTTTTCGTTTTAAATTAATGGCGGCGAGGGTTCCAACATGACAGAGTAAAGCGAGGATACATGGACTAAATAGTTTCTAAAAAGAGAAATGTGTCATTCTTTTTTAACAAACTAAAAAGGAAAGTGTGTTACATAATATGGGACGGAGGTAAATATGGTTTGAGTACAACCTATCTACTGTTTTAGTCAAATATACACAAATGTTACCTTCTCAAAATAAAAATATGGGACGGAGGGATTAGTCAAGTATAGGACCAAAGTTTAAGTCTAGATTCAAAGAATACTCTATGACTAATTGGCATATCCTTATCCTTGAAAAGCAGTTTTGCTACAGCAATCCGTTCAATTTTATGGGTAACTGTTTTTTTAGGTTAGGGAACTCCTTTACTTTCACAACTTATTAAGATGTTTTACTAGAAATCCATATCAGAAGCATATCACGTTTGACTGATTTATGTGCATAAGAAAGACATTCACTTTGGTGGAGCTTAGTTGATTTCTAGTTTTGTACTGCTCTTGTTATGATGTCTTAATCCCTACTCACAGTGGTTTCTATATTCCTTATTATTGAAACATCTATTCCTACAGCGAGGGCGGAATTTAATTAATGGTATTCGTTGACCTATGCTTAGGGTTTGGCAGAGCACAAGGATACATTGGGTGCTCCACTCTGCCCCTGCAGGTAAATATTCGTTCCTGACACATATGTTTTGATGGTTTTCATGCTTTGCTCCTTCCCAGTTACCGCAGTACCTTTGTAATTTCATCATTACCATGAAACTATACCATATTGTTGTCATTTTAATTTTCAGGCATTATGATGACAAAGCTGCAGAAGCGCAGCAGGGCTTCTGGAATTGTCCGTGTGTACCAATGAGAGAGAGGTAAGCTGTTTTTGCTTGTGTTCAGAACTGGTTGTATTTTGGGCATGTCATGTCATGTTTTTTTTTTTTTGTCTTGCTGAGAGTAAAAACAGTACCAGAAATAGGGGATTCAATAAATCGAAATCAATATAAATTCTTTGTATTCTGTGATGGCATTTTTCCTCCTTTCTGTTGGAGATACTTTCTTTTAGGTTTGCCGCTAGCTTTTTGGTAAGATAAGGCTTCATTAAGTGTTTTACTTTGAGCTTTTAGGCCTTGAATATCTGAATAATAAATCTTTGTAATGCATGAGAGACAGTGGTCAGCAACTACAGTTATGGGTGCATGAATTTAAAGATAACTTGTCAGTTGCCCTTGTGTCCTTTGGTTGTTCAACATGCTAAGGTCTGAATTGTACAGAAGGGTTTGATATATTGTGGTTTCTGTTTGGATTCTGCAAAGAAAATTGTCTGCTTGACCAGAAATGGAAACCTTGACCGGAGAAGCCATTTAGTGTTTCTAGCTCAATTATGTGTGCCATCATGTATATCTGGTATCACCCTTTTAGTCTGCATTCTCTGAATCCAAGTAATCATGGATAGTAATATTTTATCATTTATAAAATCTCCAAAATAAGGCTCCGTATCTTTCTTATAAACTTGCATTACAGGAAGGAGTGTCACTGCATGCTTTTTCTGACCCCTGATAATGATTTTGCTGGAGAAGAACAGGTAAACCAAATGCAAATATGCGAAGCTTGATTTATAGTTACCTTCTTAGATTTGAGTATTTGGTCTATAGCCCTTTTCCTCTTTTGGCTATCTGACTCCCTAAGGGTATTGTAAAAAACAAAGGATTACTATTATATGCTGTCATTGCCTAGCGTGTGTCTTGCACTTATATCTGCTACTAAGGCGACTCTTCTGTCTTTTGTTTCACAGACGATTACTATGGAGGAGATTAAGGAAACAACAGCCAACATGTGATGCTCGGACATCTTATACATGCTATGAACATTACGTTTTTGTTGTACATGTATATTTGAGTATTAGATGAAGAGCAACAATCCAGTTCTGATGTGACATGTTGCTGAAACCCCATCCATTACATTGTTGTGATTCTGATCTCGTCTAGTGAGATTGGGTGGGTGAATAACAGTGCAATTATGCTAACTGTTGTGTGATGCATCTAGATTGTATGAGTCATAACTCATATTAGGGGATTTTGGGTGGCTTCAGCTTCAGCTAATGCAAATCCTGATTTTGTATAAAACTGGAATCAATTTCCAAAAGCTGCTTTGTGAAGTTCAATCCCAGTCGTCTGACGTGTTAATAATG</genome_strand>
        <mrna_strand>GCCCGTTTATTAATTTATTTTAATTATAATTTGTCTTCAGATATTAGGTGAAAAGAAAAGGAGAGAACGGATAGTAATATATAAATATCAACGCTGTACGAAAGAGATTTTTTCCTTTCCGAAGTTGTGGTGGTTAACAGAATCACATTTTTGACTCAATCGGAAAGTCGGAGCAGAAAACGAGACAACGAAGCAACAACTACCGGAATCCGCCATGAGAACTCTTCAAGCTTCCACCTCCTACAGCGTTGGCTTTGGAATTTCATCTTTTGCTACTCGTCCTAAGCCTTCTTCTACTCATCGCTGCCTCACCGTAGCCAAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAGCCATCAGAGAAATCTGTTGAAATCATGAGGAAATTCTCGGAGCAGTATGCTCGCAGGTCAGAAACATATTTCTGCATGGACAAAGGTGTTACTTCTGTGGTCATCAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTTGGCAGAGCACAAGGATACATTGGGTGCTCCACTCTGCCCCTGCAG..................................................................................................................................GCATTATGATGACAAAGCTGCAGAAGCGCAGCAGGGCTTCTGGAATTGTCCGTGTGTACCAATGAGAGAGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGAGTGTCACTGCATGCTTTTTCTGACCCCTGATAATGATTTTGCTGGAGAAGAACAG..................................................................................................................................................................................................................ACGATTACTATGGAGGAGATTAAGGAAACAACAGCCAACATGTGATGCTCGGACATCTTATACATGCTATGAACATTACGTTTTTGTTGTACATGTATATTTGAGTATTAGATGAAGAGCAACAATCCAGTTCTGATGTGACATGTTGCTGAAACCCCATCCATTACATTGTTGTGATTCTGATCTCGTCTAGTGAGATTGGGTGGGTGAATAACAGTGCAATTATGCTAACTGTTGTGTGATGCATCTAGATTGTATGAGTCATAACTCATATTAGGGGATTTTGGGTGGCTTCAGCTTCAGCTAATGCAAATCCTGATTTTGTATAAAACTGGAATCAATTTCCAAAAGCTGCTTTGTGAAGTTCAATCCCAGTCGTCTGACGTGTTAATAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U570840" ref_strand="+" ref_description="SGN-U570840 Tomato 200607#2 [2 ESTs aligned] ">
      <seq>aggcacgagggttttgaacgttaggatactccctcctaggctataaagtgagaatttatcgtatctgcttggaaactgtattgtcgttttactaactccaagataatggcattctgtatacttgaagtttaggacaagctgcaagtgtgtgatgtcatttcagttccaaaaagttgcttctatactatagctgcttgattattgttgaatagtattttgttgctcagaagttctactttggtcttattacctcataaaaaaaaaagtgatacctttggtttagagcttgaatagccaatcactttttcccaggtatccttcactttatatttcaggtttaggtgtgtgttcgtgtatcttctagaagcatatttctatgtaagttcgtgaaagtatgaatttaaaattgtggagctgtggaaactcttgaactgaggggatatcaattatcaaagacttataatgagagataaacaatagcacaaagctaattatataataaaggacagttatacaaggaatttttaacacaaagaagggaataagaattgagaaacttttaataatgtgagtacaagatttaccatctcataaacaagatagaagaatagattttatcatctcataaacaagatagaagaatagatttatctcaagtttcagagaatgtgactgtgacggagttaatagattgctaaatacaagccaatcacaaagatcaatccaacatgctgtccttctttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0014P22-osNUq/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLm0014P22.2" temp_strand="-" temp_description="C02SLm0014P22.2  AC215471.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0014P22 sequenced_by:kribb upload_account_name:korea">
        <position start="72088" stop="70749"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71792" g_stop="71049" g_length="744"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="744" r_length="744" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0014P22.2" gen_strand="-" ref_id="SGN-U570840" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>744</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0014P22.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U570840" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71792" e_stop="71049"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATACAAATGTTTTGAACGTTAGGATACTCCCTCCTAGGCTATAAAGTGAGAATTTATCGTATCTGCTTGGAAACTGTATTGTCGTTTTACTAACTCCAAGATAATGGCATTCTGTATACTTGAAGTTTAGGACAAGCTGCAAGTGTGTGATGTCATTTCAGTTCCAAAAAGTTGCTTCTATACTATAGCTGCTTGATTATTGTTGAATAGTATTTTGTTGCTCAGAAGTTCTACTTTGGTCTTATTACCTCATAAAAAAAAAAGTGATACCTTTGGTTTAGAGCTTGAATAGCCAATCACTTTTTCCCAGGTATCCTTCACTTTATATTTCAGGTTTAGGTGTGTGTTCGTGTATCTTCTAGAAGCATATTTCTATGTAAGTTCGTGAAAGTATGAATTTAAAATTGTGGAGCTGTGGAAACTCTTGAACTGAGGGGATATCAATTATCAAAGACTTATAATGAGAGATAAACAATAGCACAAAGCTAATTATATAATAAAGGACAGTTATACAAGGAATTTTTAACACAAAGAAGGGAATAAGAATTGAGAAACTTTTAATAATGTGAGTACAAGATTTACCATCTCATAAACAAGATAGAAGAATAGATTTTATCATCTCATAAACAAGATAGAAGAATAGATTTATCTCAAGTTTCAGAGAATGTGACTGTGACGGAGTTAATAGATTGCTAAATACAAGCCAATCACAAAGATCAATCCAACATGCTGTCCTTCTTTT</genome_strand>
        <mrna_strand>AGGCACGAGGGTTTTGAACGTTAGGATACTCCCTCCTAGGCTATAAAGTGAGAATTTATCGTATCTGCTTGGAAACTGTATTGTCGTTTTACTAACTCCAAGATAATGGCATTCTGTATACTTGAAGTTTAGGACAAGCTGCAAGTGTGTGATGTCATTTCAGTTCCAAAAAGTTGCTTCTATACTATAGCTGCTTGATTATTGTTGAATAGTATTTTGTTGCTCAGAAGTTCTACTTTGGTCTTATTACCTCATAAAAAAAAAAGTGATACCTTTGGTTTAGAGCTTGAATAGCCAATCACTTTTTCCCAGGTATCCTTCACTTTATATTTCAGGTTTAGGTGTGTGTTCGTGTATCTTCTAGAAGCATATTTCTATGTAAGTTCGTGAAAGTATGAATTTAAAATTGTGGAGCTGTGGAAACTCTTGAACTGAGGGGATATCAATTATCAAAGACTTATAATGAGAGATAAACAATAGCACAAAGCTAATTATATAATAAAGGACAGTTATACAAGGAATTTTTAACACAAAGAAGGGAATAAGAATTGAGAAACTTTTAATAATGTGAGTACAAGATTTACCATCTCATAAACAAGATAGAAGAATAGATTTTATCATCTCATAAACAAGATAGAAGAATAGATTTATCTCAAGTTTCAGAGAATGTGACTGTGACGGAGTTAATAGATTGCTAAATACAAGCCAATCACAAAGATCAATCCAACATGCTGTCCTTCTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>33</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="4755" PGL_stop="1"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="4755" e_stop="4660"/>
            <exon e_start="2977" e_stop="2837"/>
            <exon e_start="2757" e_stop="1917"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.901" e_score="0.938"/>
          <exon-intron don_prob="0.986" acc_prob="0.750" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.938">
            <gDNA_exon_boundary e_start="4755" e_stop="4660" e_length="96"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.901">
            <gDNA_intron_boundary i_start="4659" i_stop="2978" i_length="1682"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="2977" e_stop="2837" e_length="141"/>
          </exon>
          <intron i_serial="2" don_prob="0.986" acc_prob="0.750">
            <gDNA_intron_boundary i_start="2836" i_stop="2758" i_length="79"/>
          </intron>
          <exon e_serial="3" e_score="0.998">
            <gDNA_exon_boundary e_start="2757" e_stop="1917" e_length="841"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4755" stop="4660"/>
              <exon start="2977" stop="2837"/>
              <exon start="2757" stop="1917"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U584016" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4753" stop="4660"/>
              <exon start="2977" stop="2914"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U594106" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAGAACAATTTTGAATGCTCTCTCTTTATGTAAACATTATGCTTTGTATGAAATAAAGGTCCTCTAAGATTTCTGTAAGCAACTTTGAAAATTTCT : TTAGGTACTCCAACTACTGGAGAAAGGGTATCAGAAGGTTTTGTAGCAGTGCCGTGGTGCATGAAGAGCCAATCACTCCACCTGTTGAGGTTAAATATAATCAGCTTCTCATTAATGGACAGTTTGTTGATGCAGCCTCAG : GGAAGACATTTCCTACATTTGACCCTCGAACAGGCGAAGCTATTACTACGGTTGCGGAGGCCGACACTGAAGATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAAGGACCATGGCCTAAAATGACTTGTGCAGTAACCGAACTTTCTTATCTTTCCATATCCTCTTCCTTGTCCCAACAGTGAGAGGCGGATTTAGAATTTGAACTTAACATGTTCAACCTTTAAGGTTCTTATCGCTGAACACATTGATCTATCGGACATACGTGTTTAGATTTTAATATTCTCTCATTTTAGTACTTTCACATATATATTTATTTCCTGTATTATATGGTCCCTCTACCGAAGTTAATTTCTCAGTTGGTCGTTCAACTAATAGTAATTATTTGAGTAATATAAGTCACTTTCTTTGTTGAAGAAAATTGGAATCAAGTTGAAAAATGACTTCTTGAGATAATAACTATTTAGCAAAGTGACCATATGAGAAATCAATCCGCCTCTGCAGACAACTACAGCTTGTTTAAACTCCCAGTCTTACTTAAGCATGTACAATAATGTACTTACTTAACCAAATATTTCCAGGAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGTTAAGAAAATAAGAAAAATGGCGTTATGTTTCCTTTTGACAGTTTAATAACCACTTATTGTATATCAATTGACGTTCTAATGTTTGCTGAATCACC</gDNA_template>
            <first_frame> Q  N  N  F  E  C  S  L  F  M  *  T  L  C  F  V  *  N  K  G  P  L  R  F  L  *  A  T  L  K  I  S  :  L  G  T  P  T  T  G  E  R  V  S  E  G  F  V  A  V  P  W  C  M  K  S  Q  S  L  H  L  L  R  L  N  I  I  S  F  S  L  M  D  S  L  L  M  Q  P  Q  :  G  R  H  F  L  H  L  T  L  E  Q  A  K  L  L  L  R  L  R  R  P  T  L  K  M  S  T  V  Q  S  L  L  P  V  K  H  L  M  K  D  H  G  L  K  *  L  V  Q  *  P  N  F  L  I  F  P  Y  P  L  P  C  P  N  S  E  R  R  I  *  N  L  N  L  T  C  S  T  F  K  V  L  I  A  E  H  I  D  L  S  D  I  R  V  *  I  L  I  F  S  H  F  S  T  F  T  Y  I  F  I  S  C  I  I  W  S  L  Y  R  S  *  F  L  S  W  S  F  N  *  *  *  L  F  E  *  Y  K  S  L  S  L  L  K  K  I  G  I  K  L  K  N  D  F  L  R  *  *  L  F  S  K  V  T  I  *  E  I  N  P  P  L  Q  T  T  T  A  C  L  N  S  Q  S  Y  L  S  M  Y  N  N  V  L  T  *  P  N  I  S  R  K  G  H  V  *  C  C  S  L  L  I  C  L  R  G  T  V  M  N  L  Q  H  L  R  L  G  I  R  E  S  L  T  N  K  L  Q  M  K  K  Y  Q  C  S  F  V  F  S  D  T  M  L  V  K  K  I  R  K  M  A  L  C  F  L  L  T  V  *  *  P  L  I  V  Y  Q  L  T  F  *  C  L  L  N  H  </first_frame>
            <second_frame>  R  T  I  L  N  A  L  S  L  C  K  H  Y  A  L  Y  E  I  K  V  L  *  D  F  C  K  Q  L  *  K  F  L :   *  V  L  Q  L  L  E  K  G  Y  Q  K  V  L  *  Q  C  R  G  A  *  R  A  N  H  S  T  C  *  G  *  I  *  S  A  S  H  *  W  T  V  C  *  C  S  L  R :   E  D  I  S  Y  I  *  P  S  N  R  R  S  Y  Y  Y  G  C  G  G  R  H  *  R  C  Q  P  C  S  L  C  C  P  *  S  I  *  *  R  T  M  A  *  N  D  L  C  S  N  R  T  F  L  S  F  H  I  L  F  L  V  P  T  V  R  G  G  F  R  I  *  T  *  H  V  Q  P  L  R  F  L  S  L  N  T  L  I  Y  R  T  Y  V  F  R  F  *  Y  S  L  I  L  V  L  S  H  I  Y  L  F  P  V  L  Y  G  P  S  T  E  V  N  F  S  V  G  R  S  T  N  S  N  Y  L  S  N  I  S  H  F  L  C  *  R  K  L  E  S  S  *  K  M  T  S  *  D  N  N  Y  L  A  K  *  P  Y  E  K  S  I  R  L  C  R  Q  L  Q  L  V  *  T  P  S  L  T  *  A  C  T  I  M  Y  L  L  N  Q  I  F  P  G  K  V  M  Y  N  V  A  V  C  *  F  A  *  E  A  Q  *  *  T  C  S  T  *  D  L  G  *  G  K  A  L  R  T  S  C  K  *  R  N  T  N  A  H  S  S  F  Q  I  L  C  W  L  R  K  *  E  K  W  R  Y  V  S  F  *  Q  F  N  N  H  L  L  Y  I  N  *  R  S  N  V  C  *  I  T </second_frame>
            <third_frame>   E  Q  F  *  M  L  S  L  Y  V  N  I  M  L  C  M  K  *  R  S  S  K  I  S  V  S  N  F  E  N  F   : F  R  Y  S  N  Y  W  R  K  G  I  R  R  F  C  S  S  A  V  V  H  E  E  P  I  T  P  P  V  E  V  K  Y  N  Q  L  L  I  N  G  Q  F  V  D  A  A  S   : G  K  T  F  P  T  F  D  P  R  T  G  E  A  I  T  T  V  A  E  A  D  T  E  D  V  N  R  A  V  F  A  A  R  K  A  F  D  E  G  P  W  P  K  M  T  C  A  V  T  E  L  S  Y  L  S  I  S  S  S  L  S  Q  Q  *  E  A  D  L  E  F  E  L  N  M  F  N  L  *  G  S  Y  R  *  T  H  *  S  I  G  H  T  C  L  D  F  N  I  L  S  F  *  Y  F  H  I  Y  I  Y  F  L  Y  Y  M  V  P  L  P  K  L  I  S  Q  L  V  V  Q  L  I  V  I  I  *  V  I  *  V  T  F  F  V  E  E  N  W  N  Q  V  E  K  *  L  L  E  I  I  T  I  *  Q  S  D  H  M  R  N  Q  S  A  S  A  D  N  Y  S  L  F  K  L  P  V  L  L  K  H  V  Q  *  C  T  Y  L  T  K  Y  F  Q  E  R  S  C  I  M  L  Q  F  A  D  L  L  E  R  H  S  D  E  L  A  A  L  E  T  W  D  K  G  K  P  Y  E  Q  A  A  N  E  E  I  P  M  L  I  R  L  F  R  Y  Y  A  G  *  E  N  K  K  N  G  V  M  F  P  F  D  S  L  I  T  T  Y  C  I  S  I  D  V  L  M  F  A  E  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0014P22.2" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="4699" stop="4660"/>
                    <exon start="2977" stop="2837"/>
                    <exon start="2757" stop="2564"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>372</number_coding_nucleotides>
                  <number_encoded_amino_acids>124</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RSSKISVSNFENFFRYSNYWRKGIRRFCSSAVVHEEPITPPVEVKYNQLLINGQFVDAASGKTFPTFDPRTGEAITTVAEADTEDVNRAVFAARKAFDEGPWPKMTCAVTELSYLSISSSLSQQ*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0014P22.2" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="4677" stop="4660"/>
                    <exon start="2977" stop="2837"/>
                    <exon start="2757" stop="2623"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>291</number_coding_nucleotides>
                  <number_encoded_amino_acids>97</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ATLKISLGTPTTGERVSEGFVAVPWCMKSQSLHLLRLNIISFSLMDSLLMQPQGRHFLHLTLEQAKLLLRLRRPTLKMSTVQSLLPVKHLMKDHGLK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="4169" e_stop="3371"/>
            <exon e_start="2977" e_stop="2837"/>
            <exon e_start="2757" e_stop="2521"/>
            <exon e_start="2167" e_stop="1908"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.901" e_score="0.997"/>
          <exon-intron don_prob="0.986" acc_prob="0.750" e_score="0.972"/>
          <exon-intron don_prob="0.177" acc_prob="0.922" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="4169" e_stop="3371" e_length="799"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.901">
            <gDNA_intron_boundary i_start="3370" i_stop="2978" i_length="393"/>
          </intron>
          <exon e_serial="2" e_score="0.972">
            <gDNA_exon_boundary e_start="2977" e_stop="2837" e_length="141"/>
          </exon>
          <intron i_serial="2" don_prob="0.986" acc_prob="0.750">
            <gDNA_intron_boundary i_start="2836" i_stop="2758" i_length="79"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="2757" e_stop="2521" e_length="237"/>
          </exon>
          <intron i_serial="3" don_prob="0.177" acc_prob="0.922">
            <gDNA_intron_boundary i_start="2520" i_stop="2168" i_length="353"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="2167" e_stop="1908" e_length="260"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4169" stop="3371"/>
              <exon start="2977" stop="2837"/>
              <exon start="2757" stop="2636"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U584020" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2888" stop="2837"/>
              <exon start="2757" stop="2521"/>
              <exon start="2167" stop="1908"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U594107" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCAACTTTTTTCCATGAGTTGATTTCCAAGAAAATGGAAATAACTTTGCCCGCATTGGATCTAACTAACAACTTATTGTTCTACCCAAGTCCAAGAAATCAAAAACAAACCCATATAATGGTAGCGTGGCGGCGGCGCGTCTTCTTCAATGGTTTCCAGGAGAAGGGGAAATAACTTTACCCACATCCGACCCAACTAACAAGTAAACCATCTTTCCCGTTATAGTTCTACCCAGGTCCAAGAAGGCAAATACAAACCCCTCTGGGCGTGGCAGCGGCGCATCTTCTTCCATGTCTTCCAAGAAAAGGGAAAATAACTTTGCCTTTTCCCATCTTCTACAGTTCCCTTAATTTTGCATTTTTTTAGAATCTAACTCAACAGTCCCTTTATGGACTTCATCACTTCTAACCAAACACAAATCCAACTAAGAAGAGATAAAACTCAATAAAATGAATAGCGTCCCAGAGGAAAATCTCAACACCTGAGTAGACATAAAAAAGAATCAACTTAGCAGTTAAATAAAATATCACATCATCAACAGCAGAAGTTGCCGCCTGAATCGCCACGAACCCAACCACAAAAGCAGAGACAAATTTCCCTTGCTGAAAGAATCAGCCCAAATCCACTACATTCTTGTACTGCAATTCCAATTACACTTGCCTCGAAATTGCCGCAAATACAGTAACTTGGTGACTTTTGAGGAAGATGGAAAAATTGATTCTTTTCTATTGGGTGGACAAACTCACCAAGAGTAATTAAAAATAAATATGGTCTGTTTTGAGGTTGAAGTTTAATTCAG : TTAGGTACTCCAACTACTGGAGAAAGGGTATCAGAAGGTTTTGTAGCAGTGCCGTGGTGCATGAAGAGCCAATCACTCCACCTGTTGAGGTTAAATATAATCAGCTTCTCATTAATGGACAGTTTGTTGATGCAGCCTCAG : GGAAGACATTTCCTACATTTGACCCTCGAACAGGCGAAGCTATTACTACGGTTGCGGAGGCCGACACTGAAGATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAAGGACCATGGCCTAAAATGACTTGTGCAGTAACCGAACTTTCTTATCTTTCCATATCCTCTTCCTTGTCCCAACAGTGAGAGGCGGATTTAGAATTTGAACTTAACATGTTCAACCTTTAAG : GAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGTTAAGAAAATAAGAAAAATGGCGTTATGTTTCCTTTTGACAGTTTAATAACCACTTATTGTATATCAATTGACGTTCTAATGTTTGCTGAATCACCCTAAATGCT</gDNA_template>
            <first_frame> A  T  F  F  H  E  L  I  S  K  K  M  E  I  T  L  P  A  L  D  L  T  N  N  L  L  F  Y  P  S  P  R  N  Q  K  Q  T  H  I  M  V  A  W  R  R  R  V  F  F  N  G  F  Q  E  K  G  K  *  L  Y  P  H  P  T  Q  L  T  S  K  P  S  F  P  L  *  F  Y  P  G  P  R  R  Q  I  Q  T  P  L  G  V  A  A  A  H  L  L  P  C  L  P  R  K  G  K  I  T  L  P  F  P  I  F  Y  S  S  L  N  F  A  F  F  *  N  L  T  Q  Q  S  L  Y  G  L  H  H  F  *  P  N  T  N  P  T  K  K  R  *  N  S  I  K  *  I  A  S  Q  R  K  I  S  T  P  E  *  T  *  K  R  I  N  L  A  V  K  *  N  I  T  S  S  T  A  E  V  A  A  *  I  A  T  N  P  T  T  K  A  E  T  N  F  P  C  *  K  N  Q  P  K  S  T  T  F  L  Y  C  N  S  N  Y  T  C  L  E  I  A  A  N  T  V  T  W  *  L  L  R  K  M  E  K  L  I  L  F  Y  W  V  D  K  L  T  K  S  N  *  K  *  I  W  S  V  L  R  L  K  F  N  S   : V  R  Y  S  N  Y  W  R  K  G  I  R  R  F  C  S  S  A  V  V  H  E  E  P  I  T  P  P  V  E  V  K  Y  N  Q  L  L  I  N  G  Q  F  V  D  A  A  S   : G  K  T  F  P  T  F  D  P  R  T  G  E  A  I  T  T  V  A  E  A  D  T  E  D  V  N  R  A  V  F  A  A  R  K  A  F  D  E  G  P  W  P  K  M  T  C  A  V  T  E  L  S  Y  L  S  I  S  S  S  L  S  Q  Q  *  E  A  D  L  E  F  E  L  N  M  F  N  L  *   : G  K  V  M  Y  N  V  A  V  C  *  F  A  *  E  A  Q  *  *  T  C  S  T  *  D  L  G  *  G  K  A  L  R  T  S  C  K  *  R  N  T  N  A  H  S  S  F  Q  I  L  C  W  L  R  K  *  E  K  W  R  Y  V  S  F  *  Q  F  N  N  H  L  L  Y  I  N  *  R  S  N  V  C  *  I  T  L  N  A </first_frame>
            <second_frame>  Q  L  F  S  M  S  *  F  P  R  K  W  K  *  L  C  P  H  W  I  *  L  T  T  Y  C  S  T  Q  V  Q  E  I  K  N  K  P  I  *  W  *  R  G  G  G  A  S  S  S  M  V  S  R  R  R  G  N  N  F  T  H  I  R  P  N  *  Q  V  N  H  L  S  R  Y  S  S  T  Q  V  Q  E  G  K  Y  K  P  L  W  A  W  Q  R  R  I  F  F  H  V  F  Q  E  K  G  K  *  L  C  L  F  P  S  S  T  V  P  L  I  L  H  F  F  R  I  *  L  N  S  P  F  M  D  F  I  T  S  N  Q  T  Q  I  Q  L  R  R  D  K  T  Q  *  N  E  *  R  P  R  G  K  S  Q  H  L  S  R  H  K  K  E  S  T  *  Q  L  N  K  I  S  H  H  Q  Q  Q  K  L  P  P  E  S  P  R  T  Q  P  Q  K  Q  R  Q  I  S  L  A  E  R  I  S  P  N  P  L  H  S  C  T  A  I  P  I  T  L  A  S  K  L  P  Q  I  Q  *  L  G  D  F  *  G  R  W  K  N  *  F  F  S  I  G  W  T  N  S  P  R  V  I  K  N  K  Y  G  L  F  *  G  *  S  L  I  Q  :  L  G  T  P  T  T  G  E  R  V  S  E  G  F  V  A  V  P  W  C  M  K  S  Q  S  L  H  L  L  R  L  N  I  I  S  F  S  L  M  D  S  L  L  M  Q  P  Q  :  G  R  H  F  L  H  L  T  L  E  Q  A  K  L  L  L  R  L  R  R  P  T  L  K  M  S  T  V  Q  S  L  L  P  V  K  H  L  M  K  D  H  G  L  K  *  L  V  Q  *  P  N  F  L  I  F  P  Y  P  L  P  C  P  N  S  E  R  R  I  *  N  L  N  L  T  C  S  T  F  K  :  E  R  S  C  I  M  L  Q  F  A  D  L  L  E  R  H  S  D  E  L  A  A  L  E  T  W  D  K  G  K  P  Y  E  Q  A  A  N  E  E  I  P  M  L  I  R  L  F  R  Y  Y  A  G  *  E  N  K  K  N  G  V  M  F  P  F  D  S  L  I  T  T  Y  C  I  S  I  D  V  L  M  F  A  E  S  P  *  M   </second_frame>
            <third_frame>   N  F  F  P  *  V  D  F  Q  E  N  G  N  N  F  A  R  I  G  S  N  *  Q  L  I  V  L  P  K  S  K  K  S  K  T  N  P  Y  N  G  S  V  A  A  A  R  L  L  Q  W  F  P  G  E  G  E  I  T  L  P  T  S  D  P  T  N  K  *  T  I  F  P  V  I  V  L  P  R  S  K  K  A  N  T  N  P  S  G  R  G  S  G  A  S  S  S  M  S  S  K  K  R  E  N  N  F  A  F  S  H  L  L  Q  F  P  *  F  C  I  F  L  E  S  N  S  T  V  P  L  W  T  S  S  L  L  T  K  H  K  S  N  *  E  E  I  K  L  N  K  M  N  S  V  P  E  E  N  L  N  T  *  V  D  I  K  K  N  Q  L  S  S  *  I  K  Y  H  I  I  N  S  R  S  C  R  L  N  R  H  E  P  N  H  K  S  R  D  K  F  P  L  L  K  E  S  A  Q  I  H  Y  I  L  V  L  Q  F  Q  L  H  L  P  R  N  C  R  K  Y  S  N  L  V  T  F  E  E  D  G  K  I  D  S  F  L  L  G  G  Q  T  H  Q  E  *  L  K  I  N  M  V  C  F  E  V  E  V  *  F  S :   *  V  L  Q  L  L  E  K  G  Y  Q  K  V  L  *  Q  C  R  G  A  *  R  A  N  H  S  T  C  *  G  *  I  *  S  A  S  H  *  W  T  V  C  *  C  S  L  R :   E  D  I  S  Y  I  *  P  S  N  R  R  S  Y  Y  Y  G  C  G  G  R  H  *  R  C  Q  P  C  S  L  C  C  P  *  S  I  *  *  R  T  M  A  *  N  D  L  C  S  N  R  T  F  L  S  F  H  I  L  F  L  V  P  T  V  R  G  G  F  R  I  *  T  *  H  V  Q  P  L  R :   K  G  H  V  *  C  C  S  L  L  I  C  L  R  G  T  V  M  N  L  Q  H  L  R  L  G  I  R  E  S  L  T  N  K  L  Q  M  K  K  Y  Q  C  S  F  V  F  S  D  T  M  L  V  K  K  I  R  K  M  A  L  C  F  L  L  T  V  *  *  P  L  I  V  Y  Q  L  T  F  *  C  L  L  N  H  P  K  C  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0014P22.2" strand="-"/>
                <serials PGL_serial="1" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="3404" stop="3371"/>
                    <exon start="2977" stop="2837"/>
                    <exon start="2757" stop="2564"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>366</number_coding_nucleotides>
                  <number_encoded_amino_acids>122</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IWSVLRLKFNSVRYSNYWRKGIRRFCSSAVVHEEPITPPVEVKYNQLLINGQFVDAASGKTFPTFDPRTGEAITTVAEADTEDVNRAVFAARKAFDEGPWPKMTCAVTELSYLSISSSLSQQ*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0014P22.2" strand="-"/>
                <serials PGL_serial="1" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="3382" stop="3371"/>
                    <exon start="2977" stop="2837"/>
                    <exon start="2757" stop="2623"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>285</number_coding_nucleotides>
                  <number_encoded_amino_acids>95</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SLIQLGTPTTGERVSEGFVAVPWCMKSQSLHLLRLNIISFSLMDSLLMQPQGRHFLHLTLEQAKLLLRLRRPTLKMSTVQSLLPVKHLMKDHGLK*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0014P22.2" strand="-"/>
                <serials PGL_serial="1" AGS_serial="2" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="3651" stop="3415"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>234</number_coding_nucleotides>
                  <number_encoded_amino_acids>78</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IKYHIINSRSCRLNRHEPNHKSRDKFPLLKESAQIHYILVLQFQLHLPRNCRKYSNLVTFEEDGKIDSFLLGGQTHQE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="4753" e_stop="4660"/>
            <exon e_start="2977" e_stop="2837"/>
            <exon e_start="2757" e_stop="2615"/>
            <exon e_start="2167" e_stop="2014"/>
            <exon e_start="1873" e_stop="1644"/>
            <exon e_start="1424" e_stop="1341"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.901" e_score="0.984"/>
          <exon-intron don_prob="0.986" acc_prob="0.750" e_score="1.000"/>
          <exon-intron don_prob="0.793" acc_prob="0.922" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.959" acc_prob="0.980" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.984">
            <gDNA_exon_boundary e_start="4753" e_stop="4660" e_length="94"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.901">
            <gDNA_intron_boundary i_start="4659" i_stop="2978" i_length="1682"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="2977" e_stop="2837" e_length="141"/>
          </exon>
          <intron i_serial="2" don_prob="0.986" acc_prob="0.750">
            <gDNA_intron_boundary i_start="2836" i_stop="2758" i_length="79"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="2757" e_stop="2615" e_length="143"/>
          </exon>
          <intron i_serial="3" don_prob="0.793" acc_prob="0.922">
            <gDNA_intron_boundary i_start="2614" i_stop="2168" i_length="447"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="2167" e_stop="2014" e_length="154"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.997">
            <gDNA_intron_boundary i_start="2013" i_stop="1874" i_length="140"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="1873" e_stop="1644" e_length="230"/>
          </exon>
          <intron i_serial="5" don_prob="0.959" acc_prob="0.980">
            <gDNA_intron_boundary i_start="1643" i_stop="1425" i_length="219"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="1424" e_stop="1341" e_length="84"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4753" stop="4660"/>
              <exon start="2977" stop="2914"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U594106" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4723" stop="4660"/>
              <exon start="2977" stop="2837"/>
              <exon start="2757" stop="2615"/>
              <exon start="2167" stop="2014"/>
              <exon start="1873" stop="1644"/>
              <exon start="1424" stop="1341"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U584014" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAACAATTTTGAATGCTCTCTCTTTATGTAAACATTATGCTTTGTATGAAATAAAGGTCCTCTAAGATTTCTGTAAGCAACTTTGAAAATTTCT : TTAGGTACTCCAACTACTGGAGAAAGGGTATCAGAAGGTTTTGTAGCAGTGCCGTGGTGCATGAAGAGCCAATCACTCCACCTGTTGAGGTTAAATATAATCAGCTTCTCATTAATGGACAGTTTGTTGATGCAGCCTCAG : GGAAGACATTTCCTACATTTGACCCTCGAACAGGCGAAGCTATTACTACGGTTGCGGAGGCCGACACTGAAGATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAAGGACCATGGCCTAAAATGACTTGTGCA : GAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTG : GTTGGGCTGATAAAATTCATGGTCTTACAGCTCCTGCTGACAGTTTGCACCATGTTCAGACCCTGCATGAGCCAATTGGTGTTGCAGGACAGATAATACCCTGGAATTTTCCGTTATTAATGTTCGCCTGGAAAGTTGGCCCTGCACTTGCTTGTGGTAACACTGTCGTACTAAAACCAGCAGAACAAACACCACTCTCTGCCCTGTATGTGTCAAAGTTATTCCATGAG : GTTGGACTTCCCCCTGGAGTCTTAAATGTCATTCCTGGATCCGGTAGTGCAGGTGCAGATCTTGCCAGTCATATGGATGTCGAT</gDNA_template>
            <first_frame> E  Q  F  *  M  L  S  L  Y  V  N  I  M  L  C  M  K  *  R  S  S  K  I  S  V  S  N  F  E  N  F   : F  R  Y  S  N  Y  W  R  K  G  I  R  R  F  C  S  S  A  V  V  H  E  E  P  I  T  P  P  V  E  V  K  Y  N  Q  L  L  I  N  G  Q  F  V  D  A  A  S   : G  K  T  F  P  T  F  D  P  R  T  G  E  A  I  T  T  V  A  E  A  D  T  E  D  V  N  R  A  V  F  A  A  R  K  A  F  D  E  G  P  W  P  K  M  T  C  A  :  E  R  S  C  I  M  L  Q  F  A  D  L  L  E  R  H  S  D  E  L  A  A  L  E  T  W  D  K  G  K  P  Y  E  Q  A  A  N  E  E  I  P  M  L  I  R  L  F  R  Y  Y  A   : G  W  A  D  K  I  H  G  L  T  A  P  A  D  S  L  H  H  V  Q  T  L  H  E  P  I  G  V  A  G  Q  I  I  P  W  N  F  P  L  L  M  F  A  W  K  V  G  P  A  L  A  C  G  N  T  V  V  L  K  P  A  E  Q  T  P  L  S  A  L  Y  V  S  K  L  F  H  E  :  V  G  L  P  P  G  V  L  N  V  I  P  G  S  G  S  A  G  A  D  L  A  S  H  M  D  V  D </first_frame>
            <second_frame>  N  N  F  E  C  S  L  F  M  *  T  L  C  F  V  *  N  K  G  P  L  R  F  L  *  A  T  L  K  I  S  :  L  G  T  P  T  T  G  E  R  V  S  E  G  F  V  A  V  P  W  C  M  K  S  Q  S  L  H  L  L  R  L  N  I  I  S  F  S  L  M  D  S  L  L  M  Q  P  Q  :  G  R  H  F  L  H  L  T  L  E  Q  A  K  L  L  L  R  L  R  R  P  T  L  K  M  S  T  V  Q  S  L  L  P  V  K  H  L  M  K  D  H  G  L  K  *  L  V  Q :   K  G  H  V  *  C  C  S  L  L  I  C  L  R  G  T  V  M  N  L  Q  H  L  R  L  G  I  R  E  S  L  T  N  K  L  Q  M  K  K  Y  Q  C  S  F  V  F  S  D  T  M  L  :  V  G  L  I  K  F  M  V  L  Q  L  L  L  T  V  C  T  M  F  R  P  C  M  S  Q  L  V  L  Q  D  R  *  Y  P  G  I  F  R  Y  *  C  S  P  G  K  L  A  L  H  L  L  V  V  T  L  S  Y  *  N  Q  Q  N  K  H  H  S  L  P  C  M  C  Q  S  Y  S  M  R :   L  D  F  P  L  E  S  *  M  S  F  L  D  P  V  V  Q  V  Q  I  L  P  V  I  W  M  S   </second_frame>
            <third_frame>   T  I  L  N  A  L  S  L  C  K  H  Y  A  L  Y  E  I  K  V  L  *  D  F  C  K  Q  L  *  K  F  L :   *  V  L  Q  L  L  E  K  G  Y  Q  K  V  L  *  Q  C  R  G  A  *  R  A  N  H  S  T  C  *  G  *  I  *  S  A  S  H  *  W  T  V  C  *  C  S  L  R :   E  D  I  S  Y  I  *  P  S  N  R  R  S  Y  Y  Y  G  C  G  G  R  H  *  R  C  Q  P  C  S  L  C  C  P  *  S  I  *  *  R  T  M  A  *  N  D  L  C   : R  K  V  M  Y  N  V  A  V  C  *  F  A  *  E  A  Q  *  *  T  C  S  T  *  D  L  G  *  G  K  A  L  R  T  S  C  K  *  R  N  T  N  A  H  S  S  F  Q  I  L  C  W :   L  G  *  *  N  S  W  S  Y  S  S  C  *  Q  F  A  P  C  S  D  P  A  *  A  N  W  C  C  R  T  D  N  T  L  E  F  S  V  I  N  V  R  L  E  S  W  P  C  T  C  L  W  *  H  C  R  T  K  T  S  R  T  N  T  T  L  C  P  V  C  V  K  V  I  P  *   : G  W  T  S  P  W  S  L  K  C  H  S  W  I  R  *  C  R  C  R  S  C  Q  S  Y  G  C  R  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0014P22.2" strand="-"/>
                <serials PGL_serial="1" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="4699" stop="4660"/>
                    <exon start="2977" stop="2837"/>
                    <exon start="2757" stop="2615"/>
                    <exon start="2167" stop="2014"/>
                    <exon start="1873" stop="1644"/>
                    <exon start="1424" stop="1341"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>792</number_coding_nucleotides>
                  <number_encoded_amino_acids>264</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RSSKISVSNFENFFRYSNYWRKGIRRFCSSAVVHEEPITPPVEVKYNQLLINGQFVDAASGKTFPTFDPRTGEAITTVAEADTEDVNRAVFAARKAFDEGPWPKMTCAERSCIMLQFADLLERHSDELAALETWDKGKPYEQAANEEIPMLIRLFRYYAGWADKIHGLTAPADSLHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTVVLKPAEQTPLSALYVSKLFHEVGLPPGVLNVIPGSGSAGADLASHMDVD</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="4753" e_stop="4660"/>
            <exon e_start="2977" e_stop="2837"/>
            <exon e_start="2757" e_stop="2521"/>
            <exon e_start="1873" e_stop="1661"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.901" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.750" e_score="1.000"/>
          <exon-intron don_prob="0.177" acc_prob="0.997" e_score="0.996"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="4753" e_stop="4660" e_length="94"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.901">
            <gDNA_intron_boundary i_start="4659" i_stop="2978" i_length="1682"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="2977" e_stop="2837" e_length="141"/>
          </exon>
          <intron i_serial="2" don_prob="0.986" acc_prob="0.750">
            <gDNA_intron_boundary i_start="2836" i_stop="2758" i_length="79"/>
          </intron>
          <exon e_serial="3" e_score="0.996">
            <gDNA_exon_boundary e_start="2757" e_stop="2521" e_length="237"/>
          </exon>
          <intron i_serial="3" don_prob="0.177" acc_prob="0.997">
            <gDNA_intron_boundary i_start="2520" i_stop="1874" i_length="647"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="1873" e_stop="1661" e_length="213"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4753" stop="4660"/>
              <exon start="2977" stop="2914"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U594106" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4738" stop="4660"/>
              <exon start="2977" stop="2837"/>
              <exon start="2757" stop="2521"/>
              <exon start="1873" stop="1661"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U594105" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="4" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAACAATTTTGAATGCTCTCTCTTTATGTAAACATTATGCTTTGTATGAAATAAAGGTCCTCTAAGATTTCTGTAAGCAACTTTGAAAATTTCT : TTAGGTACTCCAACTACTGGAGAAAGGGTATCAGAAGGTTTTGTAGCAGTGCCGTGGTGCATGAAGAGCCAATCACTCCACCTGTTGAGGTTAAATATAATCAGCTTCTCATTAATGGACAGTTTGTTGATGCAGCCTCAG : GGAAGACATTTCCTACATTTGACCCTCGAACAGGCGAAGCTATTACTACGGTTGCGGAGGCCGACACTGAAGATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAAGGACCATGGCCTAAAATGACTTGTGCAGTAACCGAACTTTCTTATCTTTCCATATCCTCTTCCTTGTCCCAACAGTGAGAGGCGGATTTAGAATTTGAACTTAACATGTTCAACCTTTAAG : GTTGGGCTGATAAAATTCATGGTCTTACAGCTCCTGCTGACAGTTTGCACCATGTTCAGACCCTGCATGAGCCAATTGGTGTTGCAGGACAGATAATACCCTGGAATTTTCCGTTATTAATGTTCGCCTGGAAAGTTGGCCCTGCACTTGCTTGTGGTAACACTGTCGTACTAAAACCAGCAGAACAAACACCACTCTCTGCCCTGTATGTGT</gDNA_template>
            <first_frame> E  Q  F  *  M  L  S  L  Y  V  N  I  M  L  C  M  K  *  R  S  S  K  I  S  V  S  N  F  E  N  F   : F  R  Y  S  N  Y  W  R  K  G  I  R  R  F  C  S  S  A  V  V  H  E  E  P  I  T  P  P  V  E  V  K  Y  N  Q  L  L  I  N  G  Q  F  V  D  A  A  S   : G  K  T  F  P  T  F  D  P  R  T  G  E  A  I  T  T  V  A  E  A  D  T  E  D  V  N  R  A  V  F  A  A  R  K  A  F  D  E  G  P  W  P  K  M  T  C  A  V  T  E  L  S  Y  L  S  I  S  S  S  L  S  Q  Q  *  E  A  D  L  E  F  E  L  N  M  F  N  L  *   : G  W  A  D  K  I  H  G  L  T  A  P  A  D  S  L  H  H  V  Q  T  L  H  E  P  I  G  V  A  G  Q  I  I  P  W  N  F  P  L  L  M  F  A  W  K  V  G  P  A  L  A  C  G  N  T  V  V  L  K  P  A  E  Q  T  P  L  S  A  L  Y  V  </first_frame>
            <second_frame>  N  N  F  E  C  S  L  F  M  *  T  L  C  F  V  *  N  K  G  P  L  R  F  L  *  A  T  L  K  I  S  :  L  G  T  P  T  T  G  E  R  V  S  E  G  F  V  A  V  P  W  C  M  K  S  Q  S  L  H  L  L  R  L  N  I  I  S  F  S  L  M  D  S  L  L  M  Q  P  Q  :  G  R  H  F  L  H  L  T  L  E  Q  A  K  L  L  L  R  L  R  R  P  T  L  K  M  S  T  V  Q  S  L  L  P  V  K  H  L  M  K  D  H  G  L  K  *  L  V  Q  *  P  N  F  L  I  F  P  Y  P  L  P  C  P  N  S  E  R  R  I  *  N  L  N  L  T  C  S  T  F  K  :  V  G  L  I  K  F  M  V  L  Q  L  L  L  T  V  C  T  M  F  R  P  C  M  S  Q  L  V  L  Q  D  R  *  Y  P  G  I  F  R  Y  *  C  S  P  G  K  L  A  L  H  L  L  V  V  T  L  S  Y  *  N  Q  Q  N  K  H  H  S  L  P  C  M  C </second_frame>
            <third_frame>   T  I  L  N  A  L  S  L  C  K  H  Y  A  L  Y  E  I  K  V  L  *  D  F  C  K  Q  L  *  K  F  L :   *  V  L  Q  L  L  E  K  G  Y  Q  K  V  L  *  Q  C  R  G  A  *  R  A  N  H  S  T  C  *  G  *  I  *  S  A  S  H  *  W  T  V  C  *  C  S  L  R :   E  D  I  S  Y  I  *  P  S  N  R  R  S  Y  Y  Y  G  C  G  G  R  H  *  R  C  Q  P  C  S  L  C  C  P  *  S  I  *  *  R  T  M  A  *  N  D  L  C  S  N  R  T  F  L  S  F  H  I  L  F  L  V  P  T  V  R  G  G  F  R  I  *  T  *  H  V  Q  P  L  R :   L  G  *  *  N  S  W  S  Y  S  S  C  *  Q  F  A  P  C  S  D  P  A  *  A  N  W  C  C  R  T  D  N  T  L  E  F  S  V  I  N  V  R  L  E  S  W  P  C  T  C  L  W  *  H  C  R  T  K  T  S  R  T  N  T  T  L  C  P  V  C   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0014P22.2" strand="-"/>
                <serials PGL_serial="1" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="4699" stop="4660"/>
                    <exon start="2977" stop="2837"/>
                    <exon start="2757" stop="2564"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>372</number_coding_nucleotides>
                  <number_encoded_amino_acids>124</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RSSKISVSNFENFFRYSNYWRKGIRRFCSSAVVHEEPITPPVEVKYNQLLINGQFVDAASGKTFPTFDPRTGEAITTVAEADTEDVNRAVFAARKAFDEGPWPKMTCAVTELSYLSISSSLSQQ*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0014P22.2" strand="-"/>
                <serials PGL_serial="1" AGS_serial="4" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="4677" stop="4660"/>
                    <exon start="2977" stop="2837"/>
                    <exon start="2757" stop="2623"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>291</number_coding_nucleotides>
                  <number_encoded_amino_acids>97</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ATLKISLGTPTTGERVSEGFVAVPWCMKSQSLHLLRLNIISFSLMDSLLMQPQGRHFLHLTLEQAKLLLRLRRPTLKMSTVQSLLPVKHLMKDHGLK*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0014P22.2" strand="-"/>
                <serials PGL_serial="1" AGS_serial="4" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="2521" stop="1662"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>213</number_coding_nucleotides>
                  <number_encoded_amino_acids>71</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GWADKIHGLTAPADSLHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTVVLKPAEQTPLSALYV</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="5">
          <exon_coordinates>
            <exon e_start="1249" e_stop="521"/>
            <exon e_start="441" e_stop="304"/>
            <exon e_start="23" e_stop="1"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.933" acc_prob="0.857" e_score="0.999"/>
          <exon-intron don_prob="0.997" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="1249" e_stop="521" e_length="729"/>
          </exon>
          <intron i_serial="1" don_prob="0.933" acc_prob="0.857">
            <gDNA_intron_boundary i_start="520" i_stop="442" i_length="79"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="441" e_stop="304" e_length="138"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.000">
            <gDNA_intron_boundary i_start="303" i_stop="24" i_length="280"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="23" e_stop="1" e_length="23"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1249" stop="521"/>
              <exon start="441" stop="304"/>
              <exon start="23" stop="1"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U584013" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="5" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCCAAGGCAGTTTCAGTATCAAATTTGAAATGTTGGATTGTATAAAGGAGTGTCAGAACACGGTATTTCAGTTTCAACATATCTCTAGGTAGCAATGAAGCTATCCGTCGCTAATTCTACCCCCTCTTCCATCCCAAAGAAGATTAAAAGAAGTAAATAGCCTAATTATAGTGTCTCATTAGATAGTATAATCCACATGTAGAAAATGAAGAAAATCATATCTTTTTCTTCCAGCTTCCCCATTAAAAGTCAATAAACAACATAAAGAGGTTATGCATCCTGATGTCCTTTCAGCTTTTGTATTTCATGCTTGCTTTTATTGATGCAGCTGTGATGTGTAAAGTTTTCTGAGTGAATACTCTGGAATAGATGAGGGAGACTGAAGGAGCACTGACATCTTCTACTACTTGTTTTCGTATAGATTTAAACAGCTTGGTCCTCGACATTACTTGCATCTTTTCCCCCTGTAAAATGTTTTTTTTTGGTGATTTTTTAATTTTTCTGTGATGTCTAAATTGCGATGTGTCTCTACATCACTCCTTTTGGTGTCTACAGATTGCTTTTACAGGGTCCACAGAAACTGGTAAAGCTGTCGTAGGTGCAGCTGCAAAGAGCAACCTAAAACCTGTGACATTGGAGCTCGGAGGAAAATCTCCTTTCATCATTTGTGAAGATGCAGACGTTGATAAAGCTGTTGAGTTGGCTCATTCTGCTGTTTTCTTTAACCAG : GGACAATGCTGCTGTGCTGGATCTCGGACATTCGTACATGAAAGAGTATATGATGAATTTGTGGAGAAAGCCAAAGCTCGTGCTTTAAAACGCATTGTTGGAGACCCTTTCAAGAAGGGAGTTGAACAAGGTCCGCAG : ATTGATACAGAGCAATTTGAGAA</gDNA_template>
            <first_frame> S  K  A  V  S  V  S  N  L  K  C  W  I  V  *  R  S  V  R  T  R  Y  F  S  F  N  I  S  L  G  S  N  E  A  I  R  R  *  F  Y  P  L  F  H  P  K  E  D  *  K  K  *  I  A  *  L  *  C  L  I  R  *  Y  N  P  H  V  E  N  E  E  N  H  I  F  F  F  Q  L  P  H  *  K  S  I  N  N  I  K  R  L  C  I  L  M  S  F  Q  L  L  Y  F  M  L  A  F  I  D  A  A  V  M  C  K  V  F  *  V  N  T  L  E  *  M  R  E  T  E  G  A  L  T  S  S  T  T  C  F  R  I  D  L  N  S  L  V  L  D  I  T  C  I  F  S  P  C  K  M  F  F  F  G  D  F  L  I  F  L  *  C  L  N  C  D  V  S  L  H  H  S  F  W  C  L  Q  I  A  F  T  G  S  T  E  T  G  K  A  V  V  G  A  A  A  K  S  N  L  K  P  V  T  L  E  L  G  G  K  S  P  F  I  I  C  E  D  A  D  V  D  K  A  V  E  L  A  H  S  A  V  F  F  N  Q  :  G  Q  C  C  C  A  G  S  R  T  F  V  H  E  R  V  Y  D  E  F  V  E  K  A  K  A  R  A  L  K  R  I  V  G  D  P  F  K  K  G  V  E  Q  G  P  Q  :  I  D  T  E  Q  F  E   </first_frame>
            <second_frame>  P  R  Q  F  Q  Y  Q  I  *  N  V  G  L  Y  K  G  V  S  E  H  G  I  S  V  S  T  Y  L  *  V  A  M  K  L  S  V  A  N  S  T  P  S  S  I  P  K  K  I  K  R  S  K  *  P  N  Y  S  V  S  L  D  S  I  I  H  M  *  K  M  K  K  I  I  S  F  S  S  S  F  P  I  K  S  Q  *  T  T  *  R  G  Y  A  S  *  C  P  F  S  F  C  I  S  C  L  L  L  L  M  Q  L  *  C  V  K  F  S  E  *  I  L  W  N  R  *  G  R  L  K  E  H  *  H  L  L  L  L  V  F  V  *  I  *  T  A  W  S  S  T  L  L  A  S  F  P  P  V  K  C  F  F  L  V  I  F  *  F  F  C  D  V  *  I  A  M  C  L  Y  I  T  P  F  G  V  Y  R  L  L  L  Q  G  P  Q  K  L  V  K  L  S  *  V  Q  L  Q  R  A  T  *  N  L  *  H  W  S  S  E  E  N  L  L  S  S  F  V  K  M  Q  T  L  I  K  L  L  S  W  L  I  L  L  F  S  L  T  R :   D  N  A  A  V  L  D  L  G  H  S  Y  M  K  E  Y  M  M  N  L  W  R  K  P  K  L  V  L  *  N  A  L  L  E  T  L  S  R  R  E  L  N  K  V  R  R :   L  I  Q  S  N  L  R  </second_frame>
            <third_frame>   Q  G  S  F  S  I  K  F  E  M  L  D  C  I  K  E  C  Q  N  T  V  F  Q  F  Q  H  I  S  R  *  Q  *  S  Y  P  S  L  I  L  P  P  L  P  S  Q  R  R  L  K  E  V  N  S  L  I  I  V  S  H  *  I  V  *  S  T  C  R  K  *  R  K  S  Y  L  F  L  P  A  S  P  L  K  V  N  K  Q  H  K  E  V  M  H  P  D  V  L  S  A  F  V  F  H  A  C  F  Y  *  C  S  C  D  V  *  S  F  L  S  E  Y  S  G  I  D  E  G  D  *  R  S  T  D  I  F  Y  Y  L  F  S  Y  R  F  K  Q  L  G  P  R  H  Y  L  H  L  F  P  L  *  N  V  F  F  W  *  F  F  N  F  S  V  M  S  K  L  R  C  V  S  T  S  L  L  L  V  S  T  D  C  F  Y  R  V  H  R  N  W  *  S  C  R  R  C  S  C  K  E  Q  P  K  T  C  D  I  G  A  R  R  K  I  S  F  H  H  L  *  R  C  R  R  *  *  S  C  *  V  G  S  F  C  C  F  L  *  P   : G  T  M  L  L  C  W  I  S  D  I  R  T  *  K  S  I  *  *  I  C  G  E  S  Q  S  S  C  F  K  T  H  C  W  R  P  F  Q  E  G  S  *  T  R  S  A   : D  *  Y  R  A  I  *  E </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0014P22.2" strand="-"/>
                <serials PGL_serial="1" AGS_serial="5" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="742" stop="521"/>
                    <exon start="441" stop="304"/>
                    <exon start="23" stop="3"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>381</number_coding_nucleotides>
                  <number_encoded_amino_acids>127</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CLNCDVSLHHSFWCLQIAFTGSTETGKAVVGAAAKSNLKPVTLELGGKSPFIICEDADVDKAVELAHSAVFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRIVGDPFKKGVEQGPQIDTEQFE</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="6">
          <exon_coordinates>
            <exon e_start="2168" e_stop="1991"/>
            <exon e_start="1873" e_stop="1644"/>
            <exon e_start="1424" e_stop="1338"/>
            <exon e_start="694" e_stop="579"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.997" e_score="0.989"/>
          <exon-intron don_prob="0.959" acc_prob="0.980" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.991"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.989">
            <gDNA_exon_boundary e_start="2168" e_stop="1991" e_length="178"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.997">
            <gDNA_intron_boundary i_start="1990" i_stop="1874" i_length="117"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="1873" e_stop="1644" e_length="230"/>
          </exon>
          <intron i_serial="2" don_prob="0.959" acc_prob="0.980">
            <gDNA_intron_boundary i_start="1643" i_stop="1425" i_length="219"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="1424" e_stop="1338" e_length="87"/>
          </exon>
          <intron i_serial="3" don_prob="0.996" acc_prob="1.000">
            <gDNA_intron_boundary i_start="1337" i_stop="695" i_length="643"/>
          </intron>
          <exon e_serial="4" e_score="0.991">
            <gDNA_exon_boundary e_start="694" e_stop="579" e_length="116"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2168" stop="1991"/>
              <exon start="1873" stop="1644"/>
              <exon start="1424" stop="1338"/>
              <exon start="694" stop="579"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U584018" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="6" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGTTAAGAAAATAAGAAAAATGGC : GTTGGGCTGATAAAATTCATGGTCTTACAGCTCCTGCTGACAGTTTGCACCATGTTCAGACCCTGCATGAGCCAATTGGTGTTGCAGGACAGATAATACCCTGGAATTTTCCGTTATTAATGTTCGCCTGGAAAGTTGGCCCTGCACTTGCTTGTGGTAACACTGTCGTACTAAAACCAGCAGAACAAACACCACTCTCTGCCCTGTATGTGTCAAAGTTATTCCATGAG : GTTGGACTTCCCCCTGGAGTCTTAAATGTCATTCCTGGATCCGGTAGTGCAGGTGCAGATCTTGCCAGTCATATGGATGTCGATAAG : ATTGCTTTTACAGGGTCCACAGAAACTGGTAAAGCTGTCGTAGGTGCAGCTGCAAAGAGCAACCTAAAACCTGTGACATTGGAGCTCGGAGGAAAATCTCCTTTCATCATTTGTGA</gDNA_template>
            <first_frame> G  K  V  M  Y  N  V  A  V  C  *  F  A  *  E  A  Q  *  *  T  C  S  T  *  D  L  G  *  G  K  A  L  R  T  S  C  K  *  R  N  T  N  A  H  S  S  F  Q  I  L  C  W  L  R  K  *  E  K  W   : R  W  A  D  K  I  H  G  L  T  A  P  A  D  S  L  H  H  V  Q  T  L  H  E  P  I  G  V  A  G  Q  I  I  P  W  N  F  P  L  L  M  F  A  W  K  V  G  P  A  L  A  C  G  N  T  V  V  L  K  P  A  E  Q  T  P  L  S  A  L  Y  V  S  K  L  F  H  E  :  V  G  L  P  P  G  V  L  N  V  I  P  G  S  G  S  A  G  A  D  L  A  S  H  M  D  V  D  K  :  I  A  F  T  G  S  T  E  T  G  K  A  V  V  G  A  A  A  K  S  N  L  K  P  V  T  L  E  L  G  G  K  S  P  F  I  I  C   </first_frame>
            <second_frame>  E  R  S  C  I  M  L  Q  F  A  D  L  L  E  R  H  S  D  E  L  A  A  L  E  T  W  D  K  G  K  P  Y  E  Q  A  A  N  E  E  I  P  M  L  I  R  L  F  R  Y  Y  A  G  *  E  N  K  K  N  G  :  V  G  L  I  K  F  M  V  L  Q  L  L  L  T  V  C  T  M  F  R  P  C  M  S  Q  L  V  L  Q  D  R  *  Y  P  G  I  F  R  Y  *  C  S  P  G  K  L  A  L  H  L  L  V  V  T  L  S  Y  *  N  Q  Q  N  K  H  H  S  L  P  C  M  C  Q  S  Y  S  M  R :   L  D  F  P  L  E  S  *  M  S  F  L  D  P  V  V  Q  V  Q  I  L  P  V  I  W  M  S  I  R :   L  L  L  Q  G  P  Q  K  L  V  K  L  S  *  V  Q  L  Q  R  A  T  *  N  L  *  H  W  S  S  E  E  N  L  L  S  S  F  V  </second_frame>
            <third_frame>   K  G  H  V  *  C  C  S  L  L  I  C  L  R  G  T  V  M  N  L  Q  H  L  R  L  G  I  R  E  S  L  T  N  K  L  Q  M  K  K  Y  Q  C  S  F  V  F  S  D  T  M  L  V  K  K  I  R  K  M  A :   L  G  *  *  N  S  W  S  Y  S  S  C  *  Q  F  A  P  C  S  D  P  A  *  A  N  W  C  C  R  T  D  N  T  L  E  F  S  V  I  N  V  R  L  E  S  W  P  C  T  C  L  W  *  H  C  R  T  K  T  S  R  T  N  T  T  L  C  P  V  C  V  K  V  I  P  *   : G  W  T  S  P  W  S  L  K  C  H  S  W  I  R  *  C  R  C  R  S  C  Q  S  Y  G  C  R  *   : D  C  F  Y  R  V  H  R  N  W  *  S  C  R  R  C  S  C  K  E  Q  P  K  T  C  D  I  G  A  R  R  K  I  S  F  H  H  L  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0014P22.2" strand="-"/>
                <serials PGL_serial="1" AGS_serial="6" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="2000" stop="1991"/>
                    <exon start="1873" stop="1644"/>
                    <exon start="1424" stop="1338"/>
                    <exon start="694" stop="581"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>441</number_coding_nucleotides>
                  <number_encoded_amino_acids>147</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EKWRWADKIHGLTAPADSLHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTVVLKPAEQTPLSALYVSKLFHEVGLPPGVLNVIPGSGSAGADLASHMDVDKIAFTGSTETGKAVVGAAAKSNLKPVTLELGGKSPFIIC</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="7821" PGL_stop="9887"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="7821" e_stop="8400"/>
            <exon e_start="8857" e_stop="9887"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.967" acc_prob="0.985" e_score="0.969"/>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.969">
            <gDNA_exon_boundary e_start="7821" e_stop="8400" e_length="580"/>
          </exon>
          <intron i_serial="1" don_prob="0.967" acc_prob="0.985">
            <gDNA_intron_boundary i_start="8401" i_stop="8856" i_length="456"/>
          </intron>
          <exon e_serial="2" e_score="0.993">
            <gDNA_exon_boundary e_start="8857" e_stop="9887" e_length="1031"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7821" stop="8400"/>
              <exon start="8857" stop="9102"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U582910" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8142" stop="8400"/>
              <exon start="8857" stop="9887"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U582911" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGTGTCATCAGTGAACAAGAGAAGCTACAATCATATTCTTTCCTTACCTTCCCTTTTTATATTGTTATTCTAAATAGTTTATCAATAACTTCATAAAATTAATACATAAATTATATAAAAAAAATTCTATTATACTCATGATAGTTAATTACTTCGAAAATAGATATTTGATCAACTTAAGAAAATTAGTAATTAATTTTCATATTATAATTTTGAAAAGGAATCTCTAACAAACAAATTAAAAATAAAAGATGATTTACCTATCATTTTTTTGAAAAATTAACTTTAATGAAAGTGAAATCCAAACAGGTGAGAGATATAAAAAAAAAAAAAGGAAAAGAGAGAGTACTAAATTAAGATGCAGTCCATTCTTTTGCACATAAACAGTAGTAAAGACGTAGTATAAATACTTGAAGTGCGAAGCTGAGAAATGATCCGTCGTGTATGAGTATTCATTGCTGGAGACGAGAAAATTAAATAGAGATGGAGAAGAAGAGATAAGAATCGGAGCAACGTCAAGAATTCAGATACAGAGTAATTTTTGGACAGAGACAGATTTGCTGCTGCTAAAAATGCAGAG : AAAAATCAGGCTCATCTGGCTTAAACAGCTTGGGCATTTTTAAGCTAGAAGAAGAATCAGCCATCTTCTGTTCTATTCCTCTTCTCGTATTAGTAGCAAATCGTTTGGCCAAAATTGTAGCTCCAAGTTGTTGGGAACCACGAGAACCACTGGCTACTAACGGTTGCTCAGGACCAGCGTCATCAAAACTTTGCTCATTGTAGTTACCCTCATCATTAGGATCTTGATTATAATAATAGCTCTCTTGTAGAGCCAACTCGTATTCCATCTTTTTCTTCTTATACCTTCTCCATGCAGCCTGTATAAAACAAGCACCCCATGTTCTCCACTGATGAGAATAGTACCTAAATGCATGCTGTAGCTTCATGCTGTGAAGACGTTTAAATTGAACTGCAAAAAATTTCAGGTCTTCAGCTCGAAGTGCAAATGCTTCAACTTCAGTAAGTGTTCTCACTGTTCGAGTTGAAGCTGGCAACTGCGTTGAGTTAGGCAGTAAGGCCCAAGTCAGCAATTCTTCACCACAAAAATCATTAGGTCCAAGGGTGATTGAATTGAAGAATCCAGATCTTCCCCCATTTGTCGTGGAGCTCTCTAGTTGTCCCCTGATGATAAAGAGCATCTCACTCACTGGATCATCTTCTAGAACAACATATGTGCCCATTATGCTCAGGGTCGACACTAGGCGTTCACATATTGCATCAAGCAACTGGTCATCCATTTGCTCAAAAAATGGAACCTGCGCAGTCAGGAGATTTTGGGGTCTCTAAAGCTTAGCAAACAAAAGTGGATGGGTTTAGGCATTTACAGAGTAAAAATACAACTCCAAACATGTGGCTGATGCAAATACAAAACGTAAGGTACATCACAAGACAAGTCAAAGCTTAAATTGATGACTGAAGAGATGGAACTATTTTATTTATTCATTCACTAATACTTATTAGTACTTATTTCTTTTGCTCAAATCTTTAACTACTGGCAAATATTTCTGCCTGCAGCTCTTTTCCTTAATGTTTGCCTCCTGAAAGTATTTC</gDNA_template>
            <first_frame> S  V  I  S  E  Q  E  K  L  Q  S  Y  S  F  L  T  F  P  F  Y  I  V  I  L  N  S  L  S  I  T  S  *  N  *  Y  I  N  Y  I  K  K  I  L  L  Y  S  *  *  L  I  T  S  K  I  D  I  *  S  T  *  E  N  *  *  L  I  F  I  L  *  F  *  K  G  I  S  N  K  Q  I  K  N  K  R  *  F  T  Y  H  F  F  E  K  L  T  L  M  K  V  K  S  K  Q  V  R  D  I  K  K  K  K  G  K  E  R  V  L  N  *  D  A  V  H  S  F  A  H  K  Q  *  *  R  R  S  I  N  T  *  S  A  K  L  R  N  D  P  S  C  M  S  I  H  C  W  R  R  E  N  *  I  E  M  E  K  K  R  *  E  S  E  Q  R  Q  E  F  R  Y  R  V  I  F  G  Q  R  Q  I  C  C  C  *  K  C  R   : E  K  S  G  S  S  G  L  N  S  L  G  I  F  K  L  E  E  E  S  A  I  F  C  S  I  P  L  L  V  L  V  A  N  R  L  A  K  I  V  A  P  S  C  W  E  P  R  E  P  L  A  T  N  G  C  S  G  P  A  S  S  K  L  C  S  L  *  L  P  S  S  L  G  S  *  L  *  *  *  L  S  C  R  A  N  S  Y  S  I  F  F  F  L  Y  L  L  H  A  A  C  I  K  Q  A  P  H  V  L  H  *  *  E  *  Y  L  N  A  C  C  S  F  M  L  *  R  R  L  N  *  T  A  K  N  F  R  S  S  A  R  S  A  N  A  S  T  S  V  S  V  L  T  V  R  V  E  A  G  N  C  V  E  L  G  S  K  A  Q  V  S  N  S  S  P  Q  K  S  L  G  P  R  V  I  E  L  K  N  P  D  L  P  P  F  V  V  E  L  S  S  C  P  L  M  I  K  S  I  S  L  T  G  S  S  S  R  T  T  Y  V  P  I  M  L  R  V  D  T  R  R  S  H  I  A  S  S  N  W  S  S  I  C  S  K  N  G  T  C  A  V  R  R  F  W  G  L  *  S  L  A  N  K  S  G  W  V  *  A  F  T  E  *  K  Y  N  S  K  H  V  A  D  A  N  T  K  R  K  V  H  H  K  T  S  Q  S  L  N  *  *  L  K  R  W  N  Y  F  I  Y  S  F  T  N  T  Y  *  Y  L  F  L  L  L  K  S  L  T  T  G  K  Y  F  C  L  Q  L  F  S  L  M  F  A  S  *  K  Y  F </first_frame>
            <second_frame>  V  S  S  V  N  K  R  S  Y  N  H  I  L  S  L  P  S  L  F  I  L  L  F  *  I  V  Y  Q  *  L  H  K  I  N  T  *  I  I  *  K  K  F  Y  Y  T  H  D  S  *  L  L  R  K  *  I  F  D  Q  L  K  K  I  S  N  *  F  S  Y  Y  N  F  E  K  E  S  L  T  N  K  L  K  I  K  D  D  L  P  I  I  F  L  K  N  *  L  *  *  K  *  N  P  N  R  *  E  I  *  K  K  K  K  E  K  R  E  Y  *  I  K  M  Q  S  I  L  L  H  I  N  S  S  K  D  V  V  *  I  L  E  V  R  S  *  E  M  I  R  R  V  *  V  F  I  A  G  D  E  K  I  K  *  R  W  R  R  R  D  K  N  R  S  N  V  K  N  S  D  T  E  *  F  L  D  R  D  R  F  A  A  A  K  N  A  E  :  K  N  Q  A  H  L  A  *  T  A  W  A  F  L  S  *  K  K  N  Q  P  S  S  V  L  F  L  F  S  Y  *  *  Q  I  V  W  P  K  L  *  L  Q  V  V  G  N  H  E  N  H  W  L  L  T  V  A  Q  D  Q  R  H  Q  N  F  A  H  C  S  Y  P  H  H  *  D  L  D  Y  N  N  S  S  L  V  E  P  T  R  I  P  S  F  S  S  Y  T  F  S  M  Q  P  V  *  N  K  H  P  M  F  S  T  D  E  N  S  T  *  M  H  A  V  A  S  C  C  E  D  V  *  I  E  L  Q  K  I  S  G  L  Q  L  E  V  Q  M  L  Q  L  Q  *  V  F  S  L  F  E  L  K  L  A  T  A  L  S  *  A  V  R  P  K  S  A  I  L  H  H  K  N  H  *  V  Q  G  *  L  N  *  R  I  Q  I  F  P  H  L  S  W  S  S  L  V  V  P  *  *  *  R  A  S  H  S  L  D  H  L  L  E  Q  H  M  C  P  L  C  S  G  S  T  L  G  V  H  I  L  H  Q  A  T  G  H  P  F  A  Q  K  M  E  P  A  Q  S  G  D  F  G  V  S  K  A  *  Q  T  K  V  D  G  F  R  H  L  Q  S  K  N  T  T  P  N  M  W  L  M  Q  I  Q  N  V  R  Y  I  T  R  Q  V  K  A  *  I  D  D  *  R  D  G  T  I  L  F  I  H  S  L  I  L  I  S  T  Y  F  F  C  S  N  L  *  L  L  A  N  I  S  A  C  S  S  F  P  *  C  L  P  P  E  S  I   </second_frame>
            <third_frame>   C  H  Q  *  T  R  E  A  T  I  I  F  F  P  Y  L  P  F  L  Y  C  Y  S  K  *  F  I  N  N  F  I  K  L  I  H  K  L  Y  K  K  N  S  I  I  L  M  I  V  N  Y  F  E  N  R  Y  L  I  N  L  R  K  L  V  I  N  F  H  I  I  I  L  K  R  N  L  *  Q  T  N  *  K  *  K  M  I  Y  L  S  F  F  *  K  I  N  F  N  E  S  E  I  Q  T  G  E  R  Y  K  K  K  K  R  K  R  E  S  T  K  L  R  C  S  P  F  F  C  T  *  T  V  V  K  T  *  Y  K  Y  L  K  C  E  A  E  K  *  S  V  V  Y  E  Y  S  L  L  E  T  R  K  L  N  R  D  G  E  E  E  I  R  I  G  A  T  S  R  I  Q  I  Q  S  N  F  W  T  E  T  D  L  L  L  L  K  M  Q  R :   K  I  R  L  I  W  L  K  Q  L  G  H  F  *  A  R  R  R  I  S  H  L  L  F  Y  S  S  S  R  I  S  S  K  S  F  G  Q  N  C  S  S  K  L  L  G  T  T  R  T  T  G  Y  *  R  L  L  R  T  S  V  I  K  T  L  L  I  V  V  T  L  I  I  R  I  L  I  I  I  I  A  L  L  *  S  Q  L  V  F  H  L  F  L  L  I  P  S  P  C  S  L  Y  K  T  S  T  P  C  S  P  L  M  R  I  V  P  K  C  M  L  *  L  H  A  V  K  T  F  K  L  N  C  K  K  F  Q  V  F  S  S  K  C  K  C  F  N  F  S  K  C  S  H  C  S  S  *  S  W  Q  L  R  *  V  R  Q  *  G  P  S  Q  Q  F  F  T  T  K  I  I  R  S  K  G  D  *  I  E  E  S  R  S  S  P  I  C  R  G  A  L  *  L  S  P  D  D  K  E  H  L  T  H  W  I  I  F  *  N  N  I  C  A  H  Y  A  Q  G  R  H  *  A  F  T  Y  C  I  K  Q  L  V  I  H  L  L  K  K  W  N  L  R  S  Q  E  I  L  G  S  L  K  L  S  K  Q  K  W  M  G  L  G  I  Y  R  V  K  I  Q  L  Q  T  C  G  *  C  K  Y  K  T  *  G  T  S  Q  D  K  S  K  L  K  L  M  T  E  E  M  E  L  F  Y  L  F  I  H  *  Y  L  L  V  L  I  S  F  A  Q  I  F  N  Y  W  Q  I  F  L  P  A  A  L  F  L  N  V  C  L  L  K  V  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0014P22.2" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="9246" stop="9623"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>375</number_coding_nucleotides>
                  <number_encoded_amino_acids>125</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TAKNFRSSARSANASTSVSVLTVRVEAGNCVELGSKAQVSNSSPQKSLGPRVIELKNPDLPPFVVELSSCPLMIKSISLTGSSSRTTYVPIMLRVDTRRSHIASSNWSSICSKNGTCAVRRFWGL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0014P22.2" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="8391" stop="8400"/>
                    <exon start="8857" stop="9059"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KCREKSGSSGLNSLGIFKLEEESAIFCSIPLLVLVANRLAKIVAPSCWEPREPLATNGCSGPASSKLCSL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="13413" PGL_stop="12548"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="13413" e_stop="12761"/>
            <exon e_start="12688" e_stop="12548"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.996" e_score="1.000"/>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="13413" e_stop="12761" e_length="653"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.996">
            <gDNA_intron_boundary i_start="12760" i_stop="12689" i_length="72"/>
          </intron>
          <exon e_serial="2" e_score="0.993">
            <gDNA_exon_boundary e_start="12688" e_stop="12548" e_length="141"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13413" stop="12761"/>
              <exon start="12688" stop="12548"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U566785" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACAATTTTCAATGGCAGTAAAGGAAGCTTTGATGAAAAAAGGAGCTTCAATGGAACACTCTTAATTCATTCTTCCTTCTTTTCTAGCGCTAATTTTCACTCACTGTTTCATTCATAATACAAAAAAATTATTGGAATCTGTTGTGTTTTCCAGAAGAGAGACAATCTTCCGGAATCCGATTTTGATATCGGACTCCGCCATGGAAGATGACTAGAATATTTGCAAAGCCGGCGTCTCACCTCCGTCATTTACAGCAATCTTTGAAGAACAAATCATTTTCGAACGATGTGCCATGGTGGCGCCAAATTCTCGATCCAAACAGCGATATCGTCAATCGCTGGAACTATGTCTTCCTCCTTACCTGTCTCATCTCTCTTTTCATCGATCCACTCTACTTCTACGTACCTTTCGTCAGCGATAGAGCTTGTATGTCCACTGATGACGAAGCCGCCCGTGAAATTACCATCTATCGTTCTCTCACCGACATCTTTTACTTCCTTCACATTGCCATGAAGTTCCGCACAGCTTTTGTTGCTCCTAGCTCTAGGGTTTTCGGCCGGGGTGAGCTTGTTATGGATCCCCGTGAAATTGCTATACGATATCTCAAAACTGATTTCATCGTTGATTTTACAGCTGCTCTTCCCCTGCCTCAA : ATTGTTATTCGCTATGTAATCCCAGCAGCCAAAAGAAATGGTTCGGGTCATTCCAAAAGTACACTTGCACTTATCGTTCTCATACAATATGTGCCAAGGTTATTCGTTATTTTCCCATTAAATCAGCAGATTATCAAAACT</gDNA_template>
            <first_frame> T  I  F  N  G  S  K  G  S  F  D  E  K  R  S  F  N  G  T  L  L  I  H  S  S  F  F  S  S  A  N  F  H  S  L  F  H  S  *  Y  K  K  I  I  G  I  C  C  V  F  Q  K  R  D  N  L  P  E  S  D  F  D  I  G  L  R  H  G  R  *  L  E  Y  L  Q  S  R  R  L  T  S  V  I  Y  S  N  L  *  R  T  N  H  F  R  T  M  C  H  G  G  A  K  F  S  I  Q  T  A  I  S  S  I  A  G  T  M  S  S  S  L  P  V  S  S  L  F  S  S  I  H  S  T  S  T  Y  L  S  S  A  I  E  L  V  C  P  L  M  T  K  P  P  V  K  L  P  S  I  V  L  S  P  T  S  F  T  S  F  T  L  P  *  S  S  A  Q  L  L  L  L  L  A  L  G  F  S  A  G  V  S  L  L  W  I  P  V  K  L  L  Y  D  I  S  K  L  I  S  S  L  I  L  Q  L  L  F  P  C  L  K :   L  L  F  A  M  *  S  Q  Q  P  K  E  M  V  R  V  I  P  K  V  H  L  H  L  S  F  S  Y  N  M  C  Q  G  Y  S  L  F  S  H  *  I  S  R  L  S  K   </first_frame>
            <second_frame>  Q  F  S  M  A  V  K  E  A  L  M  K  K  G  A  S  M  E  H  S  *  F  I  L  P  S  F  L  A  L  I  F  T  H  C  F  I  H  N  T  K  K  L  L  E  S  V  V  F  S  R  R  E  T  I  F  R  N  P  I  L  I  S  D  S  A  M  E  D  D  *  N  I  C  K  A  G  V  S  P  P  S  F  T  A  I  F  E  E  Q  I  I  F  E  R  C  A  M  V  A  P  N  S  R  S  K  Q  R  Y  R  Q  S  L  E  L  C  L  P  P  Y  L  S  H  L  S  F  H  R  S  T  L  L  L  R  T  F  R  Q  R  *  S  L  Y  V  H  *  *  R  S  R  P  *  N  Y  H  L  S  F  S  H  R  H  L  L  L  P  S  H  C  H  E  V  P  H  S  F  C  C  S  *  L  *  G  F  R  P  G  *  A  C  Y  G  S  P  *  N  C  Y  T  I  S  Q  N  *  F  H  R  *  F  Y  S  C  S  S  P  A  S   : N  C  Y  S  L  C  N  P  S  S  Q  K  K  W  F  G  S  F  Q  K  Y  T  C  T  Y  R  S  H  T  I  C  A  K  V  I  R  Y  F  P  I  K  S  A  D  Y  Q  N  </second_frame>
            <third_frame>   N  F  Q  W  Q  *  R  K  L  *  *  K  K  E  L  Q  W  N  T  L  N  S  F  F  L  L  F  *  R  *  F  S  L  T  V  S  F  I  I  Q  K  N  Y  W  N  L  L  C  F  P  E  E  R  Q  S  S  G  I  R  F  *  Y  R  T  P  P  W  K  M  T  R  I  F  A  K  P  A  S  H  L  R  H  L  Q  Q  S  L  K  N  K  S  F  S  N  D  V  P  W  W  R  Q  I  L  D  P  N  S  D  I  V  N  R  W  N  Y  V  F  L  L  T  C  L  I  S  L  F  I  D  P  L  Y  F  Y  V  P  F  V  S  D  R  A  C  M  S  T  D  D  E  A  A  R  E  I  T  I  Y  R  S  L  T  D  I  F  Y  F  L  H  I  A  M  K  F  R  T  A  F  V  A  P  S  S  R  V  F  G  R  G  E  L  V  M  D  P  R  E  I  A  I  R  Y  L  K  T  D  F  I  V  D  F  T  A  A  L  P  L  P  Q  :  I  V  I  R  Y  V  I  P  A  A  K  R  N  G  S  G  H  S  K  S  T  L  A  L  I  V  L  I  Q  Y  V  P  R  L  F  V  I  F  P  L  N  Q  Q  I  I  K  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0014P22.2" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="13228" stop="12761"/>
                    <exon start="12688" stop="12548"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>609</number_coding_nucleotides>
                  <number_encoded_amino_acids>203</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YRTPPWKMTRIFAKPASHLRHLQQSLKNKSFSNDVPWWRQILDPNSDIVNRWNYVFLLTCLISLFIDPLYFYVPFVSDRACMSTDDEAAREITIYRSLTDIFYFLHIAMKFRTAFVAPSSRVFGRGELVMDPREIAIRYLKTDFIVDFTAALPLPQIVIRYVIPAAKRNGSGHSKSTLALIVLIQYVPRLFVIFPLNQQIIKT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="15430" PGL_stop="22203"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="15430" e_stop="15619"/>
            <exon e_start="15856" e_stop="16006"/>
            <exon e_start="16300" e_stop="16458"/>
            <exon e_start="18244" e_stop="18303"/>
            <exon e_start="18653" e_stop="18751"/>
            <exon e_start="19587" e_stop="19694"/>
            <exon e_start="19775" e_stop="19918"/>
            <exon e_start="21298" e_stop="21405"/>
            <exon e_start="21823" e_stop="21874"/>
            <exon e_start="21944" e_stop="22203"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.951" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.835" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.518" e_score="1.000"/>
          <exon-intron don_prob="0.842" acc_prob="0.981" e_score="1.000"/>
          <exon-intron don_prob="0.273" acc_prob="0.969" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="15430" e_stop="15619" e_length="190"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="15620" i_stop="15855" i_length="236"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="15856" e_stop="16006" e_length="151"/>
          </exon>
          <intron i_serial="2" don_prob="0.951" acc_prob="0.998">
            <gDNA_intron_boundary i_start="16007" i_stop="16299" i_length="293"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="16300" e_stop="16458" e_length="159"/>
          </exon>
          <intron i_serial="3" don_prob="0.991" acc_prob="0.997">
            <gDNA_intron_boundary i_start="16459" i_stop="18243" i_length="1785"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="18244" e_stop="18303" e_length="60"/>
          </exon>
          <intron i_serial="4" don_prob="0.835" acc_prob="0.993">
            <gDNA_intron_boundary i_start="18304" i_stop="18652" i_length="349"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="18653" e_stop="18751" e_length="99"/>
          </exon>
          <intron i_serial="5" don_prob="0.992" acc_prob="0.000">
            <gDNA_intron_boundary i_start="18752" i_stop="19586" i_length="835"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="19587" e_stop="19694" e_length="108"/>
          </exon>
          <intron i_serial="6" don_prob="0.997" acc_prob="1.000">
            <gDNA_intron_boundary i_start="19695" i_stop="19774" i_length="80"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="19775" e_stop="19918" e_length="144"/>
          </exon>
          <intron i_serial="7" don_prob="0.997" acc_prob="0.518">
            <gDNA_intron_boundary i_start="19919" i_stop="21297" i_length="1379"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="21298" e_stop="21405" e_length="108"/>
          </exon>
          <intron i_serial="8" don_prob="0.842" acc_prob="0.981">
            <gDNA_intron_boundary i_start="21406" i_stop="21822" i_length="417"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="21823" e_stop="21874" e_length="52"/>
          </exon>
          <intron i_serial="9" don_prob="0.273" acc_prob="0.969">
            <gDNA_intron_boundary i_start="21875" i_stop="21943" i_length="69"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="21944" e_stop="22203" e_length="260"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15430" stop="15619"/>
              <exon start="15856" stop="16006"/>
              <exon start="16300" stop="16458"/>
              <exon start="18244" stop="18303"/>
              <exon start="18653" stop="18751"/>
              <exon start="19587" stop="19681"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U567595" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15545" stop="15619"/>
              <exon start="15856" stop="16006"/>
              <exon start="16300" stop="16458"/>
              <exon start="18244" stop="18303"/>
              <exon start="18653" stop="18751"/>
              <exon start="19587" stop="19694"/>
              <exon start="19775" stop="19918"/>
              <exon start="21298" stop="21405"/>
              <exon start="21823" stop="21874"/>
              <exon start="21944" stop="22203"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U567596" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAATCAGCCCAATTGATGTTTCCGGCAAAACAGCCCAAATATGCAGTTTCGGATCAAAATTAGCTGAAATATTACACGACTTCCCAAAATGAAACTTGAGAGATCAGCTACTGACAAAGACAAAACTCCATTAAAACTCCCTTTCTTCACCTTCCAACCAACTACACCCTTCACTCTCCTCTTCCGCTCG : TGCTGGAGTTACTTGCAAAGTCAAGTCGAAACGTTGGAGTTGGAAACATAAAATGGGGGACGAGAAGGATGCGTTCTATGTCGTGCGCAAAGGGGATGTGATCGGGGTTTATAAGAACTTGAGCGATTTGCAAGCTTTGCTACGAACATCT : ATTGGTGAACCAGCCATAAGCGTTTTTAAAGGGTATCGCTTGACTAAGGAATCTGAAGAGTATCTGGCCTCTCATGGACTCAAGAATGCAATGTATTCTATGGATTTCAGTGATGTTCGAGACGATCTCTTTGGGACTCTCATCCCATGCCCATTTCGG : CAACCCGGCTCTTCAAAAGATAAAATTGTGGGGAAGAATGTTCAGGAAAAGAGGATGCAG : ATGGAGTTGGTGGCATCTCCTTCATTTGCAGCTGCTGGTCAGCAAAAACTTGCTAAATTGGACAATTTCCTAGAAGCTCCCCCAATTTCGTCATATCCT : TCTCCCTACATGCAGTGTTCATGCATCCTTGAGTTTGATGGGGCTTCAAAGGGGAATCCTGGTCTAGCTGGTGCTGGGGCTGTGCTGCGTGCTGCAGATGGAAGTATG : GTTTTCCGGCTGCGTGAAGGTGTAGGTGTGGCAACTAACAATGTTGCTGAATACAGAGGCGTAATCTTAGGACTAAGATATGCTCTTGAGAAAGGTTTCAAACACATTAAAGTCAAGGGCGATTCGAAACTTGTCTGCATGCAG : ACTCAAGGAATCTGGAAATGCAAGAATCAGAACATGGCTGAGCTATCCAAGATTGTTAAAGAGCTTAAAGATCAGTTTATGTCTTTCCAGATCAACCACATGGACAGA : GAATCCAACACTGAAGCCGATGCCCAGGCAAATTTAGCCGTGTATCTCAAGA : ATGGCGAAATTCAAGTGGAATGTGACATGATAACTTAATTAAGTCACCAACTACTACCTCAACTTGTTGGGATTTAGGAAATGATGAATGACCGCCAAGACAGACCAATTTGGATATTCAGTTGTCTGAAACTACACTTGTAACATGTAGATATATGATCTGAATTATGTGCATGTAACCTAATTATGTATCTGGATTGAAAGTAGCTTCTGCTGTAACCTAATTTGCAATGAAAATTGGTTGGGACAAGTACACCAGGC</gDNA_template>
            <first_frame> *  S  A  Q  L  M  F  P  A  K  Q  P  K  Y  A  V  S  D  Q  N  *  L  K  Y  Y  T  T  S  Q  N  E  T  *  E  I  S  Y  *  Q  R  Q  N  S  I  K  T  P  F  L  H  L  P  T  N  Y  T  L  H  S  P  L  P  L   : V  L  E  L  L  A  K  S  S  R  N  V  G  V  G  N  I  K  W  G  T  R  R  M  R  S  M  S  C  A  K  G  M  *  S  G  F  I  R  T  *  A  I  C  K  L  C  Y  E  H  L :   L  V  N  Q  P  *  A  F  L  K  G  I  A  *  L  R  N  L  K  S  I  W  P  L  M  D  S  R  M  Q  C  I  L  W  I  S  V  M  F  E  T  I  S  L  G  L  S  S  H  A  H  F  G :   N  P  A  L  Q  K  I  K  L  W  G  R  M  F  R  K  R  G  C  R :   W  S  W  W  H  L  L  H  L  Q  L  L  V  S  K  N  L  L  N  W  T  I  S  *  K  L  P  Q  F  R  H  I  L :   L  P  T  C  S  V  H  A  S  L  S  L  M  G  L  Q  R  G  I  L  V  *  L  V  L  G  L  C  C  V  L  Q  M  E  V  W :   F  S  G  C  V  K  V  *  V  W  Q  L  T  M  L  L  N  T  E  A  *  S  *  D  *  D  M  L  L  R  K  V  S  N  T  L  K  S  R  A  I  R  N  L  S  A  C  R :   L  K  E  S  G  N  A  R  I  R  T  W  L  S  Y  P  R  L  L  K  S  L  K  I  S  L  C  L  S  R  S  T  T  W  T  E :   N  P  T  L  K  P  M  P  R  Q  I  *  P  C  I  S  R  :  M  A  K  F  K  W  N  V  T  *  *  L  N  *  V  T  N  Y  Y  L  N  L  L  G  F  R  K  *  *  M  T  A  K  T  D  Q  F  G  Y  S  V  V  *  N  Y  T  C  N  M  *  I  Y  D  L  N  Y  V  H  V  T  *  L  C  I  W  I  E  S  S  F  C  C  N  L  I  C  N  E  N  W  L  G  Q  V  H  Q   </first_frame>
            <second_frame>  N  Q  P  N  *  C  F  R  Q  N  S  P  N  M  Q  F  R  I  K  I  S  *  N  I  T  R  L  P  K  M  K  L  E  R  S  A  T  D  K  D  K  T  P  L  K  L  P  F  F  T  F  Q  P  T  T  P  F  T  L  L  F  R  S  :  C  W  S  Y  L  Q  S  Q  V  E  T  L  E  L  E  T  *  N  G  G  R  E  G  C  V  L  C  R  A  Q  R  G  C  D  R  G  L  *  E  L  E  R  F  A  S  F  A  T  N  I   : Y  W  *  T  S  H  K  R  F  *  R  V  S  L  D  *  G  I  *  R  V  S  G  L  S  W  T  Q  E  C  N  V  F  Y  G  F  Q  *  C  S  R  R  S  L  W  D  S  H  P  M  P  I  S   : A  T  R  L  F  K  R  *  N  C  G  E  E  C  S  G  K  E  D  A   : D  G  V  G  G  I  S  F  I  C  S  C  W  S  A  K  T  C  *  I  G  Q  F  P  R  S  S  P  N  F  V  I  S   : F  S  L  H  A  V  F  M  H  P  *  V  *  W  G  F  K  G  E  S  W  S  S  W  C  W  G  C  A  A  C  C  R  W  K  Y   : G  F  P  A  A  *  R  C  R  C  G  N  *  Q  C  C  *  I  Q  R  R  N  L  R  T  K  I  C  S  *  E  R  F  Q  T  H  *  S  Q  G  R  F  E  T  C  L  H  A   : D  S  R  N  L  E  M  Q  E  S  E  H  G  *  A  I  Q  D  C  *  R  A  *  R  S  V  Y  V  F  P  D  Q  P  H  G  Q   : R  I  Q  H  *  S  R  C  P  G  K  F  S  R  V  S  Q  E :   W  R  N  S  S  G  M  *  H  D  N  L  I  K  S  P  T  T  T  S  T  C  W  D  L  G  N  D  E  *  P  P  R  Q  T  N  L  D  I  Q  L  S  E  T  T  L  V  T  C  R  Y  M  I  *  I  M  C  M  *  P  N  Y  V  S  G  L  K  V  A  S  A  V  T  *  F  A  M  K  I  G  W  D  K  Y  T  R  </second_frame>
            <third_frame>   I  S  P  I  D  V  S  G  K  T  A  Q  I  C  S  F  G  S  K  L  A  E  I  L  H  D  F  P  K  *  N  L  R  D  Q  L  L  T  K  T  K  L  H  *  N  S  L  S  S  P  S  N  Q  L  H  P  S  L  S  S  S  A  R :   A  G  V  T  C  K  V  K  S  K  R  W  S  W  K  H  K  M  G  D  E  K  D  A  F  Y  V  V  R  K  G  D  V  I  G  V  Y  K  N  L  S  D  L  Q  A  L  L  R  T  S  :  I  G  E  P  A  I  S  V  F  K  G  Y  R  L  T  K  E  S  E  E  Y  L  A  S  H  G  L  K  N  A  M  Y  S  M  D  F  S  D  V  R  D  D  L  F  G  T  L  I  P  C  P  F  R  :  Q  P  G  S  S  K  D  K  I  V  G  K  N  V  Q  E  K  R  M  Q  :  M  E  L  V  A  S  P  S  F  A  A  A  G  Q  Q  K  L  A  K  L  D  N  F  L  E  A  P  P  I  S  S  Y  P  :  S  P  Y  M  Q  C  S  C  I  L  E  F  D  G  A  S  K  G  N  P  G  L  A  G  A  G  A  V  L  R  A  A  D  G  S  M  :  V  F  R  L  R  E  G  V  G  V  A  T  N  N  V  A  E  Y  R  G  V  I  L  G  L  R  Y  A  L  E  K  G  F  K  H  I  K  V  K  G  D  S  K  L  V  C  M  Q  :  T  Q  G  I  W  K  C  K  N  Q  N  M  A  E  L  S  K  I  V  K  E  L  K  D  Q  F  M  S  F  Q  I  N  H  M  D  R  :  E  S  N  T  E  A  D  A  Q  A  N  L  A  V  Y  L  K   : N  G  E  I  Q  V  E  C  D  M  I  T  *  L  S  H  Q  L  L  P  Q  L  V  G  I  *  E  M  M  N  D  R  Q  D  R  P  I  W  I  F  S  C  L  K  L  H  L  *  H  V  D  I  *  S  E  L  C  A  C  N  L  I  M  Y  L  D  *  K  *  L  L  L  *  P  N  L  Q  *  K  L  V  G  T  S  T  P  G </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0014P22.2" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="15564" stop="15619"/>
                    <exon start="15856" stop="16006"/>
                    <exon start="16300" stop="16458"/>
                    <exon start="18244" stop="18303"/>
                    <exon start="18653" stop="18751"/>
                    <exon start="19587" stop="19694"/>
                    <exon start="19775" stop="19918"/>
                    <exon start="21298" stop="21405"/>
                    <exon start="21823" stop="21874"/>
                    <exon start="21944" stop="21981"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>972</number_coding_nucleotides>
                  <number_encoded_amino_acids>324</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NSLSSPSNQLHPSLSSSARAGVTCKVKSKRWSWKHKMGDEKDAFYVVRKGDVIGVYKNLSDLQALLRTSIGEPAISVFKGYRLTKESEEYLASHGLKNAMYSMDFSDVRDDLFGTLIPCPFRQPGSSKDKIVGKNVQEKRMQMELVASPSFAAAGQQKLAKLDNFLEAPPISSYPSPYMQCSCILEFDGASKGNPGLAGAGAVLRAADGSMVFRLREGVGVATNNVAEYRGVILGLRYALEKGFKHIKVKGDSKLVCMQTQGIWKCKNQNMAELSKIVKELKDQFMSFQINHMDRESNTEADAQANLAVYLKNGEIQVECDMIT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="15733" e_stop="16006"/>
            <exon e_start="18244" e_stop="18303"/>
            <exon e_start="18653" e_stop="18751"/>
            <exon e_start="19602" e_stop="19694"/>
            <exon e_start="19775" e_stop="20354"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.951" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.835" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.677" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="1.000" e_score="0.989"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="15733" e_stop="16006" e_length="274"/>
          </exon>
          <intron i_serial="1" don_prob="0.951" acc_prob="0.997">
            <gDNA_intron_boundary i_start="16007" i_stop="18243" i_length="2237"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="18244" e_stop="18303" e_length="60"/>
          </exon>
          <intron i_serial="2" don_prob="0.835" acc_prob="0.993">
            <gDNA_intron_boundary i_start="18304" i_stop="18652" i_length="349"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="18653" e_stop="18751" e_length="99"/>
          </exon>
          <intron i_serial="3" don_prob="0.992" acc_prob="0.677">
            <gDNA_intron_boundary i_start="18752" i_stop="19601" i_length="850"/>
          </intron>
          <exon e_serial="4" e_score="0.989">
            <gDNA_exon_boundary e_start="19602" e_stop="19694" e_length="93"/>
          </exon>
          <intron i_serial="4" don_prob="0.997" acc_prob="1.000">
            <gDNA_intron_boundary i_start="19695" i_stop="19774" i_length="80"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="19775" e_stop="20354" e_length="580"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15733" stop="16006"/>
              <exon start="18244" stop="18303"/>
              <exon start="18653" stop="18751"/>
              <exon start="19602" stop="19694"/>
              <exon start="19775" stop="19914"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U596127" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19894" stop="20354"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U602385" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATATAGTAATAATACGTAGACCGTACATTGTTCTCTGAGTCTTCAAATCGTTGAGGAAATTGGGCACTTGTAGTTGTTGTTTCGTTTCGTCTTTTGCTAAAACTTATGATTGTGTTGATACAGTGCTGGAGTTACTTGCAAAGTCAAGTCGAAACGTTGGAGTTGGAAACATAAAATGGGGGACGAGAAGGATGCGTTCTATGTCGTGCGCAAAGGGGATGTGATCGGGGTTTATAAGAACTTGAGCGATTTGCAAGCTTTGCTACGAACATCT : CAACCCGGCTCTTCAAAAGATAAAATTGTGGGGAAGAATGTTCAGGAAAAGAGGATGCAG : ATGGAGTTGGTGGCATCTCCTTCATTTGCAGCTGCTGGTCAGCAAAAACTTGCTAAATTGGACAATTTCCTAGAAGCTCCCCCAATTTCGTCATATCCT : TGTTCATGCATCCTTGAGTTTGATGGGGCTTCAAAGGGGAATCCTGGTCTAGCTGGTGCTGGGGCTGTGCTGCGTGCTGCAGATGGAAGTATG : GTTTTCCGGCTGCGTGAAGGTGTAGGTGTGGCAACTAACAATGTTGCTGAATACAGAGGCGTAATCTTAGGACTAAGATATGCTCTTGAGAAAGGTTTCAAACACATTAAAGTCAAGGGCGATTCGAAACTTGTCTGCATGCAGGTCTTCTTTCTCTACTTCTTACAGCTGTTTTTTTTAGTTTTATTCATTTTTAATTTGCTTTTAGTAAATTAGTCAATTTTTCTGCTTTCTCACTTTAAATATCCTGTCAAATTTGTATATCTTCAGTAATTTATTGAAATCACTGATTTCTAAAACAATTGCTGAAGAGTCTTTTCAATTGAGTGTCAGAGACATATTCATTGAACTGGGCTACACCAACAGAAAGTGGACCGTTCAATATAAGGAGACACATGGTTTTTAACCAACTAGTTTTTGGACATGTACATCCCAAATTAACTAGAATATGATTTTGCATAATCACATAAAATTATTGAAAAATATTTTTGAGTAACAAAACACACATTAATTAAGATTCATGAATGTGATTCTTCATTTGGGACTTCATGGTTGAGCCCCCCTCCCCCCCCCCCCCCCC</gDNA_template>
            <first_frame> I  *  *  *  Y  V  D  R  T  L  F  S  E  S  S  N  R  *  G  N  W  A  L  V  V  V  V  S  F  R  L  L  L  K  L  M  I  V  L  I  Q  C  W  S  Y  L  Q  S  Q  V  E  T  L  E  L  E  T  *  N  G  G  R  E  G  C  V  L  C  R  A  Q  R  G  C  D  R  G  L  *  E  L  E  R  F  A  S  F  A  T  N  I   : S  T  R  L  F  K  R  *  N  C  G  E  E  C  S  G  K  E  D  A   : D  G  V  G  G  I  S  F  I  C  S  C  W  S  A  K  T  C  *  I  G  Q  F  P  R  S  S  P  N  F  V  I  S   : L  F  M  H  P  *  V  *  W  G  F  K  G  E  S  W  S  S  W  C  W  G  C  A  A  C  C  R  W  K  Y   : G  F  P  A  A  *  R  C  R  C  G  N  *  Q  C  C  *  I  Q  R  R  N  L  R  T  K  I  C  S  *  E  R  F  Q  T  H  *  S  Q  G  R  F  E  T  C  L  H  A  G  L  L  S  L  L  L  T  A  V  F  F  S  F  I  H  F  *  F  A  F  S  K  L  V  N  F  S  A  F  S  L  *  I  S  C  Q  I  C  I  S  S  V  I  Y  *  N  H  *  F  L  K  Q  L  L  K  S  L  F  N  *  V  S  E  T  Y  S  L  N  W  A  T  P  T  E  S  G  P  F  N  I  R  R  H  M  V  F  N  Q  L  V  F  G  H  V  H  P  K  L  T  R  I  *  F  C  I  I  T  *  N  Y  *  K  I  F  L  S  N  K  T  H  I  N  *  D  S  *  M  *  F  F  I  W  D  F  M  V  E  P  P  S  P  P  P  P   </first_frame>
            <second_frame>  Y  S  N  N  T  *  T  V  H  C  S  L  S  L  Q  I  V  E  E  I  G  H  L  *  L  L  F  R  F  V  F  C  *  N  L  *  L  C  *  Y  S  A  G  V  T  C  K  V  K  S  K  R  W  S  W  K  H  K  M  G  D  E  K  D  A  F  Y  V  V  R  K  G  D  V  I  G  V  Y  K  N  L  S  D  L  Q  A  L  L  R  T  S  :  Q  P  G  S  S  K  D  K  I  V  G  K  N  V  Q  E  K  R  M  Q  :  M  E  L  V  A  S  P  S  F  A  A  A  G  Q  Q  K  L  A  K  L  D  N  F  L  E  A  P  P  I  S  S  Y  P  :  C  S  C  I  L  E  F  D  G  A  S  K  G  N  P  G  L  A  G  A  G  A  V  L  R  A  A  D  G  S  M  :  V  F  R  L  R  E  G  V  G  V  A  T  N  N  V  A  E  Y  R  G  V  I  L  G  L  R  Y  A  L  E  K  G  F  K  H  I  K  V  K  G  D  S  K  L  V  C  M  Q  V  F  F  L  Y  F  L  Q  L  F  F  L  V  L  F  I  F  N  L  L  L  V  N  *  S  I  F  L  L  S  H  F  K  Y  P  V  K  F  V  Y  L  Q  *  F  I  E  I  T  D  F  *  N  N  C  *  R  V  F  S  I  E  C  Q  R  H  I  H  *  T  G  L  H  Q  Q  K  V  D  R  S  I  *  G  D  T  W  F  L  T  N  *  F  L  D  M  Y  I  P  N  *  L  E  Y  D  F  A  *  S  H  K  I  I  E  K  Y  F  *  V  T  K  H  T  L  I  K  I  H  E  C  D  S  S  F  G  T  S  W  L  S  P  P  P  P  P  P  P  </second_frame>
            <third_frame>   I  V  I  I  R  R  P  Y  I  V  L  *  V  F  K  S  L  R  K  L  G  T  C  S  C  C  F  V  S  S  F  A  K  T  Y  D  C  V  D  T  V  L  E  L  L  A  K  S  S  R  N  V  G  V  G  N  I  K  W  G  T  R  R  M  R  S  M  S  C  A  K  G  M  *  S  G  F  I  R  T  *  A  I  C  K  L  C  Y  E  H  L :   N  P  A  L  Q  K  I  K  L  W  G  R  M  F  R  K  R  G  C  R :   W  S  W  W  H  L  L  H  L  Q  L  L  V  S  K  N  L  L  N  W  T  I  S  *  K  L  P  Q  F  R  H  I  L :   V  H  A  S  L  S  L  M  G  L  Q  R  G  I  L  V  *  L  V  L  G  L  C  C  V  L  Q  M  E  V  W :   F  S  G  C  V  K  V  *  V  W  Q  L  T  M  L  L  N  T  E  A  *  S  *  D  *  D  M  L  L  R  K  V  S  N  T  L  K  S  R  A  I  R  N  L  S  A  C  R  S  S  F  S  T  S  Y  S  C  F  F  *  F  Y  S  F  L  I  C  F  *  *  I  S  Q  F  F  C  F  L  T  L  N  I  L  S  N  L  Y  I  F  S  N  L  L  K  S  L  I  S  K  T  I  A  E  E  S  F  Q  L  S  V  R  D  I  F  I  E  L  G  Y  T  N  R  K  W  T  V  Q  Y  K  E  T  H  G  F  *  P  T  S  F  W  T  C  T  S  Q  I  N  *  N  M  I  L  H  N  H  I  K  L  L  K  N  I  F  E  *  Q  N  T  H  *  L  R  F  M  N  V  I  L  H  L  G  L  H  G  *  A  P  L  P  P  P  P  P </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0014P22.2" strand="+"/>
                <serials PGL_serial="4" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="15851" stop="16006"/>
                    <exon start="18244" stop="18303"/>
                    <exon start="18653" stop="18751"/>
                    <exon start="19602" stop="19694"/>
                    <exon start="19775" stop="19990"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>621</number_coding_nucleotides>
                  <number_encoded_amino_acids>207</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YSAGVTCKVKSKRWSWKHKMGDEKDAFYVVRKGDVIGVYKNLSDLQALLRTSQPGSSKDKIVGKNVQEKRMQMELVASPSFAAAGQQKLAKLDNFLEAPPISSYPCSCILEFDGASKGNPGLAGAGAVLRAADGSMVFRLREGVGVATNNVAEYRGVILGLRYALEKGFKHIKVKGDSKLVCMQVFFLYFLQLFFLVLFIFNLLLVN*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0014P22.2" strand="+"/>
                <serials PGL_serial="4" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="19986" stop="20180"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>192</number_coding_nucleotides>
                  <number_encoded_amino_acids>64</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ISQFFCFLTLNILSNLYIFSNLLKSLISKTIAEESFQLSVRDIFIELGYTNRKWTVQYKETHGF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="22618" PGL_stop="29793"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="22618" e_stop="22657"/>
            <exon e_start="22948" e_stop="23097"/>
            <exon e_start="23319" e_stop="23477"/>
            <exon e_start="25292" e_stop="25351"/>
            <exon e_start="25948" e_stop="26046"/>
            <exon e_start="27350" e_stop="27457"/>
            <exon e_start="27537" e_stop="27680"/>
            <exon e_start="28859" e_stop="28966"/>
            <exon e_start="29396" e_stop="29447"/>
            <exon e_start="29515" e_stop="29793"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="0.975"/>
          <exon-intron don_prob="0.893" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.961" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.767" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.979" e_score="1.000"/>
          <exon-intron don_prob="0.740" acc_prob="0.917" e_score="0.991"/>
          <exon-intron don_prob="0.616" acc_prob="0.849" e_score="1.000"/>
          <exon-only e_score="0.975"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.975">
            <gDNA_exon_boundary e_start="22618" e_stop="22657" e_length="40"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="22658" i_stop="22947" i_length="290"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="22948" e_stop="23097" e_length="150"/>
          </exon>
          <intron i_serial="2" don_prob="0.893" acc_prob="1.000">
            <gDNA_intron_boundary i_start="23098" i_stop="23318" i_length="221"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="23319" e_stop="23477" e_length="159"/>
          </exon>
          <intron i_serial="3" don_prob="0.994" acc_prob="0.999">
            <gDNA_intron_boundary i_start="23478" i_stop="25291" i_length="1814"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="25292" e_stop="25351" e_length="60"/>
          </exon>
          <intron i_serial="4" don_prob="0.961" acc_prob="0.998">
            <gDNA_intron_boundary i_start="25352" i_stop="25947" i_length="596"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="25948" e_stop="26046" e_length="99"/>
          </exon>
          <intron i_serial="5" don_prob="0.993" acc_prob="0.767">
            <gDNA_intron_boundary i_start="26047" i_stop="27349" i_length="1303"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="27350" e_stop="27457" e_length="108"/>
          </exon>
          <intron i_serial="6" don_prob="0.995" acc_prob="0.999">
            <gDNA_intron_boundary i_start="27458" i_stop="27536" i_length="79"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="27537" e_stop="27680" e_length="144"/>
          </exon>
          <intron i_serial="7" don_prob="0.997" acc_prob="0.979">
            <gDNA_intron_boundary i_start="27681" i_stop="28858" i_length="1178"/>
          </intron>
          <exon e_serial="8" e_score="0.991">
            <gDNA_exon_boundary e_start="28859" e_stop="28966" e_length="108"/>
          </exon>
          <intron i_serial="8" don_prob="0.740" acc_prob="0.917">
            <gDNA_intron_boundary i_start="28967" i_stop="29395" i_length="429"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="29396" e_stop="29447" e_length="52"/>
          </exon>
          <intron i_serial="9" don_prob="0.616" acc_prob="0.849">
            <gDNA_intron_boundary i_start="29448" i_stop="29514" i_length="67"/>
          </intron>
          <exon e_serial="10" e_score="0.975">
            <gDNA_exon_boundary e_start="29515" e_stop="29793" e_length="279"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22618" stop="22657"/>
              <exon start="22948" stop="23097"/>
              <exon start="23319" stop="23477"/>
              <exon start="25292" stop="25351"/>
              <exon start="25948" stop="26046"/>
              <exon start="27350" stop="27457"/>
              <exon start="27537" stop="27680"/>
              <exon start="28859" stop="28966"/>
              <exon start="29396" stop="29447"/>
              <exon start="29515" stop="29793"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U567594" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CCAAGTCCCAACTACTCCCTTCACTCTCTTCCTCTGCTCG : TGGTGGAGTAACTTGCAAAGCCAAGTAAACGCGTTGGAGTTGGACACATAAATGGGGGACGAAAAGGATGCTTTTTATGTCGTGCATAAAGGGGATGTGATCGCTGTCTATAAGAACCTCAGTGATTTACAAGCTCTGCTACGATCTTCT : GTTGGTGAACCAGCTATAAGTGTTTATAAAGGGTATCACCTGGCTAAGCAATCAGAAGAGTATTTGGCATCTCATGGACTCAAAAATGCAATGTATTCTATGGATTTCAGTGATGTTCGAGATGATCTCTTTGGGATACTCGTCCCATGCCCTTTTCGG : CAACCTGGCTCTTCGAAAGATAAAATTATGGGGAAGAATCTTCCGGAGAAGAGGATGCAG : ATGGAGGTGGTTGCATCTCCTTCGTTTTCAGCCGCTGGTCAGCAAAAACATGCCACATTAGACAATTGCCTAGAAATTCCCCCGATTTCGTCATATTGT : CCCCCCTACATACAGTGTTCATGCATTCTTGAGTTTGATGGGGCTTCAAAGGGGAATCCTGGACCAGCTGGTGCTGGTGCCGTGCTGCGTGCTGCAGATGGAAGTATG : GTTTTCCGGTTGCGTGAAGGTGTGGGTGTGGCAACTAACAACGTTGCTGAATATAGAGGTGTAATCTTAGGGCTAAAATATGCTCTTGAGAAAGGTTTCAAACATGTAAAAGTTAAGGGTGACTCAAAACTCGTCTGCATGCAG : ACTCAAGGAATCTGGAAATGCAAGAACCAGAACATGGCTGAGCTATCCAAGATTGTGAAAGAGCTTAAAGATCATTTTGTATCATTCCAGATCAACCATATTTACAGA : GAATTCAACACTGAAGCTGATGCCCAGGCAAATTTAGCCGTGTATCTTAAGA : GTGGTGAATTTCAAGTGGAATGTGACAAGAAAACAACTTAATATTGTGAAGTCACCAACTACCCCAACTTGCTTGGGGGATTTTGTGAAGGATGAATGACACTCAAGACCGATGCATAATGGATCTTCTCTGGTCTTGTTTTTTTTTTTTGTAGATATATAATCTGAATCATCTGGATTAGAGAAACTTCTGTTTAGGGGCCTGCTCGAATCCATTATTCTCTTCTCACTTGCAATGGAAATTAATTAGTTCTCTAAAGCTAACTATTCTAGCACTTTG</gDNA_template>
            <first_frame> P  S  P  N  Y  S  L  H  S  L  P  L  L   : V  V  E  *  L  A  K  P  S  K  R  V  G  V  G  H  I  N  G  G  R  K  G  C  F  L  C  R  A  *  R  G  C  D  R  C  L  *  E  P  Q  *  F  T  S  S  A  T  I  F   : C  W  *  T  S  Y  K  C  L  *  R  V  S  P  G  *  A  I  R  R  V  F  G  I  S  W  T  Q  K  C  N  V  F  Y  G  F  Q  *  C  S  R  *  S  L  W  D  T  R  P  M  P  F  S   : A  T  W  L  F  E  R  *  N  Y  G  E  E  S  S  G  E  E  D  A   : D  G  G  G  C  I  S  F  V  F  S  R  W  S  A  K  T  C  H  I  R  Q  L  P  R  N  S  P  D  F  V  I  L   : S  P  L  H  T  V  F  M  H  S  *  V  *  W  G  F  K  G  E  S  W  T  S  W  C  W  C  R  A  A  C  C  R  W  K  Y   : G  F  P  V  A  *  R  C  G  C  G  N  *  Q  R  C  *  I  *  R  C  N  L  R  A  K  I  C  S  *  E  R  F  Q  T  C  K  S  *  G  *  L  K  T  R  L  H  A   : D  S  R  N  L  E  M  Q  E  P  E  H  G  *  A  I  Q  D  C  E  R  A  *  R  S  F  C  I  I  P  D  Q  P  Y  L  Q   : R  I  Q  H  *  S  *  C  P  G  K  F  S  R  V  S  *  E :   W  *  I  S  S  G  M  *  Q  E  N  N  L  I  L  *  S  H  Q  L  P  Q  L  A  W  G  I  L  *  R  M  N  D  T  Q  D  R  C  I  M  D  L  L  W  S  C  F  F  F  L  *  I  Y  N  L  N  H  L  D  *  R  N  F  C  L  G  A  C  S  N  P  L  F  S  S  H  L  Q  W  K  L  I  S  S  L  K  L  T  I  L  A  L   </first_frame>
            <second_frame>  Q  V  P  T  T  P  F  T  L  F  L  C  S  :  W  W  S  N  L  Q  S  Q  V  N  A  L  E  L  D  T  *  M  G  D  E  K  D  A  F  Y  V  V  H  K  G  D  V  I  A  V  Y  K  N  L  S  D  L  Q  A  L  L  R  S  S  :  V  G  E  P  A  I  S  V  Y  K  G  Y  H  L  A  K  Q  S  E  E  Y  L  A  S  H  G  L  K  N  A  M  Y  S  M  D  F  S  D  V  R  D  D  L  F  G  I  L  V  P  C  P  F  R  :  Q  P  G  S  S  K  D  K  I  M  G  K  N  L  P  E  K  R  M  Q  :  M  E  V  V  A  S  P  S  F  S  A  A  G  Q  Q  K  H  A  T  L  D  N  C  L  E  I  P  P  I  S  S  Y  C  :  P  P  Y  I  Q  C  S  C  I  L  E  F  D  G  A  S  K  G  N  P  G  P  A  G  A  G  A  V  L  R  A  A  D  G  S  M  :  V  F  R  L  R  E  G  V  G  V  A  T  N  N  V  A  E  Y  R  G  V  I  L  G  L  K  Y  A  L  E  K  G  F  K  H  V  K  V  K  G  D  S  K  L  V  C  M  Q  :  T  Q  G  I  W  K  C  K  N  Q  N  M  A  E  L  S  K  I  V  K  E  L  K  D  H  F  V  S  F  Q  I  N  H  I  Y  R  :  E  F  N  T  E  A  D  A  Q  A  N  L  A  V  Y  L  K   : S  G  E  F  Q  V  E  C  D  K  K  T  T  *  Y  C  E  V  T  N  Y  P  N  L  L  G  G  F  C  E  G  *  M  T  L  K  T  D  A  *  W  I  F  S  G  L  V  F  F  F  C  R  Y  I  I  *  I  I  W  I  R  E  T  S  V  *  G  P  A  R  I  H  Y  S  L  L  T  C  N  G  N  *  L  V  L  *  S  *  L  F  *  H  F  </second_frame>
            <third_frame>   K  S  Q  L  L  P  S  L  S  S  S  A  R :   G  G  V  T  C  K  A  K  *  T  R  W  S  W  T  H  K  W  G  T  K  R  M  L  F  M  S  C  I  K  G  M  *  S  L  S  I  R  T  S  V  I  Y  K  L  C  Y  D  L  L :   L  V  N  Q  L  *  V  F  I  K  G  I  T  W  L  S  N  Q  K  S  I  W  H  L  M  D  S  K  M  Q  C  I  L  W  I  S  V  M  F  E  M  I  S  L  G  Y  S  S  H  A  L  F  G :   N  L  A  L  R  K  I  K  L  W  G  R  I  F  R  R  R  G  C  R :   W  R  W  L  H  L  L  R  F  Q  P  L  V  S  K  N  M  P  H  *  T  I  A  *  K  F  P  R  F  R  H  I  V :   P  P  T  Y  S  V  H  A  F  L  S  L  M  G  L  Q  R  G  I  L  D  Q  L  V  L  V  P  C  C  V  L  Q  M  E  V  W :   F  S  G  C  V  K  V  W  V  W  Q  L  T  T  L  L  N  I  E  V  *  S  *  G  *  N  M  L  L  R  K  V  S  N  M  *  K  L  R  V  T  Q  N  S  S  A  C  R :   L  K  E  S  G  N  A  R  T  R  T  W  L  S  Y  P  R  L  *  K  S  L  K  I  I  L  Y  H  S  R  S  T  I  F  T  E :   N  S  T  L  K  L  M  P  R  Q  I  *  P  C  I  L  R  :  V  V  N  F  K  W  N  V  T  R  K  Q  L  N  I  V  K  S  P  T  T  P  T  C  L  G  D  F  V  K  D  E  *  H  S  R  P  M  H  N  G  S  S  L  V  L  F  F  F  F  V  D  I  *  S  E  S  S  G  L  E  K  L  L  F  R  G  L  L  E  S  I  I  L  F  S  L  A  M  E  I  N  *  F  S  K  A  N  Y  S  S  T  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0014P22.2" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="22999" stop="23097"/>
                    <exon start="23319" stop="23477"/>
                    <exon start="25292" stop="25351"/>
                    <exon start="25948" stop="26046"/>
                    <exon start="27350" stop="27457"/>
                    <exon start="27537" stop="27680"/>
                    <exon start="28859" stop="28966"/>
                    <exon start="29396" stop="29447"/>
                    <exon start="29515" stop="29555"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>867</number_coding_nucleotides>
                  <number_encoded_amino_acids>289</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MGDEKDAFYVVHKGDVIAVYKNLSDLQALLRSSVGEPAISVYKGYHLAKQSEEYLASHGLKNAMYSMDFSDVRDDLFGILVPCPFRQPGSSKDKIMGKNLPEKRMQMEVVASPSFSAAGQQKHATLDNCLEIPPISSYCPPYIQCSCILEFDGASKGNPGPAGAGAVLRAADGSMVFRLREGVGVATNNVAEYRGVILGLKYALEKGFKHVKVKGDSKLVCMQTQGIWKCKNQNMAELSKIVKELKDHFVSFQINHIYREFNTEADAQANLAVYLKSGEFQVECDKKTT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="26057" e_stop="26581"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="26057" e_stop="26581" e_length="525"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26057" stop="26581"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U602874" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TATTTTACCTAACAATTCTTTGTATCAATACGTTTAAATTCTTGTCATTGTCTGCTTTATCTGGATGTTGACATTCTTGGGGTGGGGTGAGGGTGGTGATTTGGTGGGTGGTTAGCCTTGGAAAGGGCTTGCTCCTATGTTTTGACTTTATTCTGCTGCTGGCCGAAACTAGTGAGGATAGTGATGCGTATTGGAGCTGATTTGGAAAATAAAAGGTTGAGAAGTCCTGATTCGGCAACCACTGATCCAAGGGGGACCAAGTGATTCTTAAATCAAACTGTAAGGGCAAAGTGGAACATTGTTGGTTAACGTTGCGCAAAAGTCCAAAGTTGGAAGATGGTGACAAAATTTATATGTAATCTATGTTGCTGGGATTCTCCAAGAAATAGTGCTGCACCCATGCTAGATCCTCCAAAATGCACTACTTTTGAAGGATTCGACATGCTCTCATCAACATTTTAGAGTCCGAGCAACATAACTTGTATTAAGTTTATTTTAGAATGTAAGGGGTCGTTTGGTACAAAA</gDNA_template>
            <first_frame> Y  F  T  *  Q  F  F  V  S  I  R  L  N  S  C  H  C  L  L  Y  L  D  V  D  I  L  G  V  G  *  G  W  *  F  G  G  W  L  A  L  E  R  A  C  S  Y  V  L  T  L  F  C  C  W  P  K  L  V  R  I  V  M  R  I  G  A  D  L  E  N  K  R  L  R  S  P  D  S  A  T  T  D  P  R  G  T  K  *  F  L  N  Q  T  V  R  A  K  W  N  I  V  G  *  R  C  A  K  V  Q  S  W  K  M  V  T  K  F  I  C  N  L  C  C  W  D  S  P  R  N  S  A  A  P  M  L  D  P  P  K  C  T  T  F  E  G  F  D  M  L  S  S  T  F  *  S  P  S  N  I  T  C  I  K  F  I  L  E  C  K  G  S  F  G  T  K </first_frame>
            <second_frame>  I  L  P  N  N  S  L  Y  Q  Y  V  *  I  L  V  I  V  C  F  I  W  M  L  T  F  L  G  W  G  E  G  G  D  L  V  G  G  *  P  W  K  G  L  A  P  M  F  *  L  Y  S  A  A  G  R  N  *  *  G  *  *  C  V  L  E  L  I  W  K  I  K  G  *  E  V  L  I  R  Q  P  L  I  Q  G  G  P  S  D  S  *  I  K  L  *  G  Q  S  G  T  L  L  V  N  V  A  Q  K  S  K  V  G  R  W  *  Q  N  L  Y  V  I  Y  V  A  G  I  L  Q  E  I  V  L  H  P  C  *  I  L  Q  N  A  L  L  L  K  D  S  T  C  S  H  Q  H  F  R  V  R  A  T  *  L  V  L  S  L  F  *  N  V  R  G  R  L  V  Q   </second_frame>
            <third_frame>   F  Y  L  T  I  L  C  I  N  T  F  K  F  L  S  L  S  A  L  S  G  C  *  H  S  W  G  G  V  R  V  V  I  W  W  V  V  S  L  G  K  G  L  L  L  C  F  D  F  I  L  L  L  A  E  T  S  E  D  S  D  A  Y  W  S  *  F  G  K  *  K  V  E  K  S  *  F  G  N  H  *  S  K  G  D  Q  V  I  L  K  S  N  C  K  G  K  V  E  H  C  W  L  T  L  R  K  S  P  K  L  E  D  G  D  K  I  Y  M  *  S  M  L  L  G  F  S  K  K  *  C  C  T  H  A  R  S  S  K  M  H  Y  F  *  R  I  R  H  A  L  I  N  I  L  E  S  E  Q  H  N  L  Y  *  V  Y  F  R  M  *  G  V  V  W  Y  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLm0014P22.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="30224" PGL_stop="33340"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="30334" e_stop="30622"/>
            <exon e_start="31321" e_stop="32288"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.998" e_score="0.969"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.969">
            <gDNA_exon_boundary e_start="30334" e_stop="30622" e_length="289"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.998">
            <gDNA_intron_boundary i_start="30623" i_stop="31320" i_length="698"/>
          </intron>
          <exon e_serial="2" e_score="0.997">
            <gDNA_exon_boundary e_start="31321" e_stop="32288" e_length="968"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30334" stop="30622"/>
              <exon start="31321" stop="32043"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U576182" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31735" stop="32288"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U587946" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGCCAAATCTCATTCTCGAATTCCCCATTCTTCATCTAATGCAATTCCCCAGCTTTTCCCAATGCAATTTCTTCGGTGTCAAAGCAACAGGAGCATTGGCGGTGGTTATTCTTGCTCTTCAAGTTCGGTGAAAGCGAAGGTACCTTTGAGAACTACCAGGATATGTTCTGCAACTGAGGAAGATGGTGCTACTGCTGTTGCCGAAGAAGAATCTGCTGCTCCCACTACATCTGATCAAACTGTTTCTGTTTCCGTCTCCCCTTCCGACGTTCTAACTATGTTCTTTCAG : GCAGAAGGAACAATGAATGAAGCTGCTATTCCTTCCGTGACTAACTCTTTAGAGGTAAATTGAGTGTGTAAAATTCAAAGCTTCTTCTGGTACATGCTAATTTGTTGACACTTCACAAAACACATTACTTGTCTGCTGCATTTGAGATACAATGTAGTAGCAGTTGCAGGGACTCTGAGTTTTTATTTTTCTGTGTAATATTAATGCTACTTGTGAATCACCAGAAGACTCGCTATTACATTGAAGAGTGAAATAAACAACACAGGTTGTTTACACTTTAAAGGACAAATTAAAGAAAGGAAAACGTTCTGATCTTTCTGAGGGATTTAAACTCTTTTTTTCTTGGAACTAGGCATATCTGAGATCTTATAATCTAGAATCAAAGAATCAGATACAGATATTCATCTGATTCTAGTTTTTCAGAAGCTGCAAGAGAGAACTATTGATTTTGTGAATGTTTGATGGAGAGCTATATCTCTTTCTCCACCTCTATCAAAACATCAGATTTTAGCTAATAATTGGAATTGAAGAATAATTGCAGGTTGCCCTAATTAAAAAAGAAAACAAGTAGTTGTAGTTTGACCTTTATCGTCTGTCCATATGTATACAGGATATTGAAGGCATTACAGGTCTCAAAATTCAAGTTGTCGAGGGCATTGCAAGTGTCGAGGTGATTCACATATATAATGCTTCTCTTACATTGACTTATTAGCCTATTCTGTTACAGGAAATTTCTTTGTAGAAAGTTTACAGCTCAATCAGCATAATGCACCTTAGAGATATATTAAAGTACTAAATTCTGAAGCATGCTTTAGGTTCCTTGTAGTTTCCTACATTCAATATGCAATATAGTGGACAACTTCCAGGTGGACTATCTTGTGCTGCCTTTTTGTGTTTGGAGTTTCTCTATAAATGATAGGAACAGTCTATCTAAATGAACGATATCCTTTAACTTTTCATGGTGAGGG</gDNA_template>
            <first_frame> S  Q  I  S  F  S  N  S  P  F  F  I  *  C  N  S  P  A  F  P  N  A  I  S  S  V  S  K  Q  Q  E  H  W  R  W  L  F  L  L  F  K  F  G  E  S  E  G  T  F  E  N  Y  Q  D  M  F  C  N  *  G  R  W  C  Y  C  C  C  R  R  R  I  C  C  S  H  Y  I  *  S  N  C  F  C  F  R  L  P  F  R  R  S  N  Y  V  L  S   : G  R  R  N  N  E  *  S  C  Y  S  F  R  D  *  L  F  R  G  K  L  S  V  *  N  S  K  L  L  L  V  H  A  N  L  L  T  L  H  K  T  H  Y  L  S  A  A  F  E  I  Q  C  S  S  S  C  R  D  S  E  F  L  F  F  C  V  I  L  M  L  L  V  N  H  Q  K  T  R  Y  Y  I  E  E  *  N  K  Q  H  R  L  F  T  L  *  R  T  N  *  R  K  E  N  V  L  I  F  L  R  D  L  N  S  F  F  L  G  T  R  H  I  *  D  L  I  I  *  N  Q  R  I  R  Y  R  Y  S  S  D  S  S  F  S  E  A  A  R  E  N  Y  *  F  C  E  C  L  M  E  S  Y  I  S  F  S  T  S  I  K  T  S  D  F  S  *  *  L  E  L  K  N  N  C  R  L  P  *  L  K  K  K  T  S  S  C  S  L  T  F  I  V  C  P  Y  V  Y  R  I  L  K  A  L  Q  V  S  K  F  K  L  S  R  A  L  Q  V  S  R  *  F  T  Y  I  M  L  L  L  H  *  L  I  S  L  F  C  Y  R  K  F  L  C  R  K  F  T  A  Q  S  A  *  C  T  L  E  I  Y  *  S  T  K  F  *  S  M  L  *  V  P  C  S  F  L  H  S  I  C  N  I  V  D  N  F  Q  V  D  Y  L  V  L  P  F  C  V  W  S  F  S  I  N  D  R  N  S  L  S  K  *  T  I  S  F  N  F  S  W  *  G </first_frame>
            <second_frame>  A  K  S  H  S  R  I  P  H  S  S  S  N  A  I  P  Q  L  F  P  M  Q  F  L  R  C  Q  S  N  R  S  I  G  G  G  Y  S  C  S  S  S  S  V  K  A  K  V  P  L  R  T  T  R  I  C  S  A  T  E  E  D  G  A  T  A  V  A  E  E  E  S  A  A  P  T  T  S  D  Q  T  V  S  V  S  V  S  P  S  D  V  L  T  M  F  F  Q  :  A  E  G  T  M  N  E  A  A  I  P  S  V  T  N  S  L  E  V  N  *  V  C  K  I  Q  S  F  F  W  Y  M  L  I  C  *  H  F  T  K  H  I  T  C  L  L  H  L  R  Y  N  V  V  A  V  A  G  T  L  S  F  Y  F  S  V  *  Y  *  C  Y  L  *  I  T  R  R  L  A  I  T  L  K  S  E  I  N  N  T  G  C  L  H  F  K  G  Q  I  K  E  R  K  T  F  *  S  F  *  G  I  *  T  L  F  F  L  E  L  G  I  S  E  I  L  *  S  R  I  K  E  S  D  T  D  I  H  L  I  L  V  F  Q  K  L  Q  E  R  T  I  D  F  V  N  V  *  W  R  A  I  S  L  S  P  P  L  S  K  H  Q  I  L  A  N  N  W  N  *  R  I  I  A  G  C  P  N  *  K  R  K  Q  V  V  V  V  *  P  L  S  S  V  H  M  Y  T  G  Y  *  R  H  Y  R  S  Q  N  S  S  C  R  G  H  C  K  C  R  G  D  S  H  I  *  C  F  S  Y  I  D  L  L  A  Y  S  V  T  G  N  F  F  V  E  S  L  Q  L  N  Q  H  N  A  P  *  R  Y  I  K  V  L  N  S  E  A  C  F  R  F  L  V  V  S  Y  I  Q  Y  A  I  *  W  T  T  S  R  W  T  I  L  C  C  L  F  V  F  G  V  S  L  *  M  I  G  T  V  Y  L  N  E  R  Y  P  L  T  F  H  G  E   </second_frame>
            <third_frame>   P  N  L  I  L  E  F  P  I  L  H  L  M  Q  F  P  S  F  S  Q  C  N  F  F  G  V  K  A  T  G  A  L  A  V  V  I  L  A  L  Q  V  R  *  K  R  R  Y  L  *  E  L  P  G  Y  V  L  Q  L  R  K  M  V  L  L  L  L  P  K  K  N  L  L  L  P  L  H  L  I  K  L  F  L  F  P  S  P  L  P  T  F  *  L  C  S  F  R :   Q  K  E  Q  *  M  K  L  L  F  L  P  *  L  T  L  *  R  *  I  E  C  V  K  F  K  A  S  S  G  T  C  *  F  V  D  T  S  Q  N  T  L  L  V  C  C  I  *  D  T  M  *  *  Q  L  Q  G  L  *  V  F  I  F  L  C  N  I  N  A  T  C  E  S  P  E  D  S  L  L  H  *  R  V  K  *  T  T  Q  V  V  Y  T  L  K  D  K  L  K  K  G  K  R  S  D  L  S  E  G  F  K  L  F  F  S  W  N  *  A  Y  L  R  S  Y  N  L  E  S  K  N  Q  I  Q  I  F  I  *  F  *  F  F  R  S  C  K  R  E  L  L  I  L  *  M  F  D  G  E  L  Y  L  F  L  H  L  Y  Q  N  I  R  F  *  L  I  I  G  I  E  E  *  L  Q  V  A  L  I  K  K  E  N  K  *  L  *  F  D  L  Y  R  L  S  I  C  I  Q  D  I  E  G  I  T  G  L  K  I  Q  V  V  E  G  I  A  S  V  E  V  I  H  I  Y  N  A  S  L  T  L  T  Y  *  P  I  L  L  Q  E  I  S  L  *  K  V  Y  S  S  I  S  I  M  H  L  R  D  I  L  K  Y  *  I  L  K  H  A  L  G  S  L  *  F  P  T  F  N  M  Q  Y  S  G  Q  L  P  G  G  L  S  C  A  A  F  L  C  L  E  F  L  Y  K  *  *  E  Q  S  I  *  M  N  D  I  L  *  L  F  M  V  R  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0014P22.2" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="30335" stop="30622"/>
                    <exon start="31321" stop="31383"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>348</number_coding_nucleotides>
                  <number_encoded_amino_acids>116</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AKSHSRIPHSSSNAIPQLFPMQFLRCQSNRSIGGGYSCSSSSVKAKVPLRTTRICSATEEDGATAVAEEESAAPTTSDQTVSVSVSPSDVLTMFFQAEGTMNEAAIPSVTNSLEVN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="30224" e_stop="30622"/>
            <exon e_start="31321" e_stop="31374"/>
            <exon e_start="31931" e_stop="31990"/>
            <exon e_start="32948" e_stop="33340"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.985" e_score="1.000"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="30224" e_stop="30622" e_length="399"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.998">
            <gDNA_intron_boundary i_start="30623" i_stop="31320" i_length="698"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="31321" e_stop="31374" e_length="54"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.997">
            <gDNA_intron_boundary i_start="31375" i_stop="31930" i_length="556"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="31931" e_stop="31990" e_length="60"/>
          </exon>
          <intron i_serial="3" don_prob="0.997" acc_prob="0.985">
            <gDNA_intron_boundary i_start="31991" i_stop="32947" i_length="957"/>
          </intron>
          <exon e_serial="4" e_score="0.997">
            <gDNA_exon_boundary e_start="32948" e_stop="33340" e_length="393"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30224" stop="30622"/>
              <exon start="31321" stop="31374"/>
              <exon start="31931" stop="31990"/>
              <exon start="32948" stop="33340"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U576181" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGTTCCTTCCATTTGTAATCTGGCTTCTGGATAAGAGTGAAAAATCACTCTGAGGAATTTGCGTCGGAAAAAAAAAATATGGCGACCGTCTCAGCATTTTCCGTTTGTAGAGCCAAATCTCATTCTCGAATTCCCCATTCTTCATCTAATGCAATTCCCCAGCTTTTCCCAATGCAATTTCTTCGGTGTCAAAGCAACAGGAGCATTGGCGGTGGTTATTCTTGCTCTTCAAGTTCGGTGAAAGCGAAGGTACCTTTGAGAACTACCAGGATATGTTCTGCAACTGAGGAAGATGGTGCTACTGCTGTTGCCGAAGAAGAATCTGCTGCTCCCACTACATCTGATCAAACTGTTTCTGTTTCCGTCTCCCCTTCCGACGTTCTAACTATGTTCTTTCAG : GCAGAAGGAACAATGAATGAAGCTGCTATTCCTTCCGTGACTAACTCTTTAGAG : GATATTGAAGGCATTACAGGTCTCAAAATTCAAGTTGTCGAGGGCATTGCAAGTGTCGAG : TTAACAAAGCAAACGACAATACAAGCTACAGGGGTGGCTTCAAGTTTGGTTGAAACAATACAAGGTTCAGGCTTCAAGTTGCAAACATTGAATCTGAGCTTTCAGGATGAAGAAGATATTAGCTAAGTGGTGGCTTGTAGAATTCAGAGACATGATAGGCTGATATCTTTCACGGGCATCCTGAGAGATCTCTGTTTATTTGTATGCCAGTAGTTTCAGTAAGCCTATATCTGTAACATTTTTGTGTTATGCAGTTCTTTGATCTTTTTCTTCCTTAGCATATGTTCCTTTCCGCAACTTATAAAAATACTTGTGAATTACTAATGATCAGCAGAATCATTTTGTTTACTTGTTGAAACAAGTGGTATACGATTGGAAAAGGTACTTCTTATG</gDNA_template>
            <first_frame> G  S  F  H  L  *  S  G  F  W  I  R  V  K  N  H  S  E  E  F  A  S  E  K  K  N  M  A  T  V  S  A  F  S  V  C  R  A  K  S  H  S  R  I  P  H  S  S  S  N  A  I  P  Q  L  F  P  M  Q  F  L  R  C  Q  S  N  R  S  I  G  G  G  Y  S  C  S  S  S  S  V  K  A  K  V  P  L  R  T  T  R  I  C  S  A  T  E  E  D  G  A  T  A  V  A  E  E  E  S  A  A  P  T  T  S  D  Q  T  V  S  V  S  V  S  P  S  D  V  L  T  M  F  F  Q  :  A  E  G  T  M  N  E  A  A  I  P  S  V  T  N  S  L  E  :  D  I  E  G  I  T  G  L  K  I  Q  V  V  E  G  I  A  S  V  E  :  L  T  K  Q  T  T  I  Q  A  T  G  V  A  S  S  L  V  E  T  I  Q  G  S  G  F  K  L  Q  T  L  N  L  S  F  Q  D  E  E  D  I  S  *  V  V  A  C  R  I  Q  R  H  D  R  L  I  S  F  T  G  I  L  R  D  L  C  L  F  V  C  Q  *  F  Q  *  A  Y  I  C  N  I  F  V  L  C  S  S  L  I  F  F  F  L  S  I  C  S  F  P  Q  L  I  K  I  L  V  N  Y  *  *  S  A  E  S  F  C  L  L  V  E  T  S  G  I  R  L  E  K  V  L  L  M </first_frame>
            <second_frame>  V  P  S  I  C  N  L  A  S  G  *  E  *  K  I  T  L  R  N  L  R  R  K  K  K  I  W  R  P  S  Q  H  F  P  F  V  E  P  N  L  I  L  E  F  P  I  L  H  L  M  Q  F  P  S  F  S  Q  C  N  F  F  G  V  K  A  T  G  A  L  A  V  V  I  L  A  L  Q  V  R  *  K  R  R  Y  L  *  E  L  P  G  Y  V  L  Q  L  R  K  M  V  L  L  L  L  P  K  K  N  L  L  L  P  L  H  L  I  K  L  F  L  F  P  S  P  L  P  T  F  *  L  C  S  F  R :   Q  K  E  Q  *  M  K  L  L  F  L  P  *  L  T  L  *  R :   I  L  K  A  L  Q  V  S  K  F  K  L  S  R  A  L  Q  V  S  S :   *  Q  S  K  R  Q  Y  K  L  Q  G  W  L  Q  V  W  L  K  Q  Y  K  V  Q  A  S  S  C  K  H  *  I  *  A  F  R  M  K  K  I  L  A  K  W  W  L  V  E  F  R  D  M  I  G  *  Y  L  S  R  A  S  *  E  I  S  V  Y  L  Y  A  S  S  F  S  K  P  I  S  V  T  F  L  C  Y  A  V  L  *  S  F  S  S  L  A  Y  V  P  F  R  N  L  *  K  Y  L  *  I  T  N  D  Q  Q  N  H  F  V  Y  L  L  K  Q  V  V  Y  D  W  K  R  Y  F  L   </second_frame>
            <third_frame>   F  L  P  F  V  I  W  L  L  D  K  S  E  K  S  L  *  G  I  C  V  G  K  K  K  Y  G  D  R  L  S  I  F  R  L  *  S  Q  I  S  F  S  N  S  P  F  F  I  *  C  N  S  P  A  F  P  N  A  I  S  S  V  S  K  Q  Q  E  H  W  R  W  L  F  L  L  F  K  F  G  E  S  E  G  T  F  E  N  Y  Q  D  M  F  C  N  *  G  R  W  C  Y  C  C  C  R  R  R  I  C  C  S  H  Y  I  *  S  N  C  F  C  F  R  L  P  F  R  R  S  N  Y  V  L  S   : G  R  R  N  N  E  *  S  C  Y  S  F  R  D  *  L  F  R   : G  Y  *  R  H  Y  R  S  Q  N  S  S  C  R  G  H  C  K  C  R   : V  N  K  A  N  D  N  T  S  Y  R  G  G  F  K  F  G  *  N  N  T  R  F  R  L  Q  V  A  N  I  E  S  E  L  S  G  *  R  R  Y  *  L  S  G  G  L  *  N  S  E  T  *  *  A  D  I  F  H  G  H  P  E  R  S  L  F  I  C  M  P  V  V  S  V  S  L  Y  L  *  H  F  C  V  M  Q  F  F  D  L  F  L  P  *  H  M  F  L  S  A  T  Y  K  N  T  C  E  L  L  M  I  S  R  I  I  L  F  T  C  *  N  K  W  Y  T  I  G  K  G  T  S  Y  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0014P22.2" strand="+"/>
                <serials PGL_serial="6" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="30242" stop="30622"/>
                    <exon start="31321" stop="31374"/>
                    <exon start="31931" stop="31990"/>
                    <exon start="32948" stop="33073"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>618</number_coding_nucleotides>
                  <number_encoded_amino_acids>206</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SGFWIRVKNHSEEFASEKKNMATVSAFSVCRAKSHSRIPHSSSNAIPQLFPMQFLRCQSNRSIGGGYSCSSSSVKAKVPLRTTRICSATEEDGATAVAEEESAAPTTSDQTVSVSVSPSDVLTMFFQAEGTMNEAAIPSVTNSLEDIEGITGLKIQVVEGIASVELTKQTTIQATGVASSLVETIQGSGFKLQTLNLSFQDEEDIS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="36679" PGL_stop="39148"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="36679" e_stop="36703"/>
            <exon e_start="36808" e_stop="36882"/>
            <exon e_start="37034" e_stop="37100"/>
            <exon e_start="37482" e_stop="37804"/>
            <exon e_start="39113" e_stop="39148"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.881" acc_prob="0.966" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.983" e_score="0.973"/>
          <exon-intron don_prob="0.990" acc_prob="0.854" e_score="1.000"/>
          <exon-intron don_prob="0.985" acc_prob="0.995" e_score="0.972"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="36679" e_stop="36703" e_length="25"/>
          </exon>
          <intron i_serial="1" don_prob="0.881" acc_prob="0.966">
            <gDNA_intron_boundary i_start="36704" i_stop="36807" i_length="104"/>
          </intron>
          <exon e_serial="2" e_score="0.973">
            <gDNA_exon_boundary e_start="36808" e_stop="36882" e_length="75"/>
          </exon>
          <intron i_serial="2" don_prob="0.994" acc_prob="0.983">
            <gDNA_intron_boundary i_start="36883" i_stop="37033" i_length="151"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="37034" e_stop="37100" e_length="67"/>
          </exon>
          <intron i_serial="3" don_prob="0.990" acc_prob="0.854">
            <gDNA_intron_boundary i_start="37101" i_stop="37481" i_length="381"/>
          </intron>
          <exon e_serial="4" e_score="0.972">
            <gDNA_exon_boundary e_start="37482" e_stop="37804" e_length="323"/>
          </exon>
          <intron i_serial="4" don_prob="0.985" acc_prob="0.995">
            <gDNA_intron_boundary i_start="37805" i_stop="39112" i_length="1308"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="39113" e_stop="39148" e_length="36"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36679" stop="36703"/>
              <exon start="36808" stop="36882"/>
              <exon start="37034" stop="37100"/>
              <exon start="37482" stop="37804"/>
              <exon start="39113" stop="39148"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U597128" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCAAGCTGACATAGCACCACTGATG : TCCACTCTTCTTGGTCTGCCATGTCCTATCAACTCAGTTGGCAATCTGCCTCTTCAGTACATGAATCTGAACAAG : GCAGAAGAAGTTGAAGCTGTGCTGGCCAATACGAAGCAAATCCTCAATCAGTTCCTTCGAAAGTCAC : AGTTAAAGCAGTCGACCTCATTATACATCAAGCCTTTCAAGCCCTTGGCTAGTTATTCATCACTATTGCGTGAAATTGAGCAACTGATTTCTCTCAAAGAGTATGAAACTGCAGTGAAATTATCTGAACATCTTAGGAGCTTGGCACTTCAAGGACTTCACTATTTTCAGACATATGATTGGCTGATGCTGATGACTGTAATCACTCTTGGCTATGTTGGTTGGATGATCTATGTCATACTCCATATCTTGCAATCTTATACATCCCTACCTGCAAATATTTTTAGCAAGGACCAAGTGCCTAATCCAAGAAGTACAGTTAAG : ATACATCTTTTAGGAGGGTTGTTGATGGGAGTAGCG</gDNA_template>
            <first_frame> S  S  *  H  S  T  T  D   : V  H  S  S  W  S  A  M  S  Y  Q  L  S  W  Q  S  A  S  S  V  H  E  S  E  Q   : G  R  R  S  *  S  C  A  G  Q  Y  E  A  N  P  Q  S  V  P  S  K  V  T :   V  K  A  V  D  L  I  I  H  Q  A  F  Q  A  L  G  *  L  F  I  T  I  A  *  N  *  A  T  D  F  S  Q  R  V  *  N  C  S  E  I  I  *  T  S  *  E  L  G  T  S  R  T  S  L  F  S  D  I  *  L  A  D  A  D  D  C  N  H  S  W  L  C  W  L  D  D  L  C  H  T  P  Y  L  A  I  L  Y  I  P  T  C  K  Y  F  *  Q  G  P  S  A  *  S  K  K  Y  S  *   : D  T  S  F  R  R  V  V  D  G  S  S  </first_frame>
            <second_frame>  Q  A  D  I  A  P  L  M  :  S  T  L  L  G  L  P  C  P  I  N  S  V  G  N  L  P  L  Q  Y  M  N  L  N  K  :  A  E  E  V  E  A  V  L  A  N  T  K  Q  I  L  N  Q  F  L  R  K  S   : Q  L  K  Q  S  T  S  L  Y  I  K  P  F  K  P  L  A  S  Y  S  S  L  L  R  E  I  E  Q  L  I  S  L  K  E  Y  E  T  A  V  K  L  S  E  H  L  R  S  L  A  L  Q  G  L  H  Y  F  Q  T  Y  D  W  L  M  L  M  T  V  I  T  L  G  Y  V  G  W  M  I  Y  V  I  L  H  I  L  Q  S  Y  T  S  L  P  A  N  I  F  S  K  D  Q  V  P  N  P  R  S  T  V  K  :  I  H  L  L  G  G  L  L  M  G  V  A </second_frame>
            <third_frame>   K  L  T  *  H  H  *  C :   P  L  F  L  V  C  H  V  L  S  T  Q  L  A  I  C  L  F  S  T  *  I  *  T  R :   Q  K  K  L  K  L  C  W  P  I  R  S  K  S  S  I  S  S  F  E  S  H  :  S  *  S  S  R  P  H  Y  T  S  S  L  S  S  P  W  L  V  I  H  H  Y  C  V  K  L  S  N  *  F  L  S  K  S  M  K  L  Q  *  N  Y  L  N  I  L  G  A  W  H  F  K  D  F  T  I  F  R  H  M  I  G  *  C  *  *  L  *  S  L  L  A  M  L  V  G  *  S  M  S  Y  S  I  S  C  N  L  I  H  P  Y  L  Q  I  F  L  A  R  T  K  C  L  I  Q  E  V  Q  L  R :   Y  I  F  *  E  G  C  *  W  E  *   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0014P22.2" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36680" stop="36703"/>
                    <exon start="36808" stop="36882"/>
                    <exon start="37034" stop="37100"/>
                    <exon start="37482" stop="37804"/>
                    <exon start="39113" stop="39148"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>525</number_coding_nucleotides>
                  <number_encoded_amino_acids>175</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QADIAPLMSTLLGLPCPINSVGNLPLQYMNLNKAEEVEAVLANTKQILNQFLRKSQLKQSTSLYIKPFKPLASYSSLLREIEQLISLKEYETAVKLSEHLRSLALQGLHYFQTYDWLMLMTVITLGYVGWMIYVILHILQSYTSLPANIFSKDQVPNPRSTVKIHLLGGLLMGVA</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="39984" PGL_stop="43195"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="39984" e_stop="40063"/>
            <exon e_start="41074" e_stop="41176"/>
            <exon e_start="41268" e_stop="41436"/>
            <exon e_start="41618" e_stop="41716"/>
            <exon e_start="41815" e_stop="41873"/>
            <exon e_start="42783" e_stop="42888"/>
            <exon e_start="43129" e_stop="43195"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.986" acc_prob="0.963" e_score="1.000"/>
          <exon-intron don_prob="0.963" acc_prob="0.969" e_score="0.942"/>
          <exon-intron don_prob="0.465" acc_prob="0.419" e_score="1.000"/>
          <exon-intron don_prob="0.894" acc_prob="0.913" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.920" e_score="0.981"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="39984" e_stop="40063" e_length="80"/>
          </exon>
          <intron i_serial="1" don_prob="0.986" acc_prob="0.963">
            <gDNA_intron_boundary i_start="40064" i_stop="41073" i_length="1010"/>
          </intron>
          <exon e_serial="2" e_score="0.942">
            <gDNA_exon_boundary e_start="41074" e_stop="41176" e_length="103"/>
          </exon>
          <intron i_serial="2" don_prob="0.963" acc_prob="0.969">
            <gDNA_intron_boundary i_start="41177" i_stop="41267" i_length="91"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="41268" e_stop="41436" e_length="169"/>
          </exon>
          <intron i_serial="3" don_prob="0.465" acc_prob="0.419">
            <gDNA_intron_boundary i_start="41437" i_stop="41617" i_length="181"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="41618" e_stop="41716" e_length="99"/>
          </exon>
          <intron i_serial="4" don_prob="0.894" acc_prob="0.913">
            <gDNA_intron_boundary i_start="41717" i_stop="41814" i_length="98"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="41815" e_stop="41873" e_length="59"/>
          </exon>
          <intron i_serial="5" don_prob="0.992" acc_prob="0.997">
            <gDNA_intron_boundary i_start="41874" i_stop="42782" i_length="909"/>
          </intron>
          <exon e_serial="6" e_score="0.981">
            <gDNA_exon_boundary e_start="42783" e_stop="42888" e_length="106"/>
          </exon>
          <intron i_serial="6" don_prob="0.999" acc_prob="0.920">
            <gDNA_intron_boundary i_start="42889" i_stop="43128" i_length="240"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="43129" e_stop="43195" e_length="67"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="39984" stop="40063"/>
              <exon start="41074" stop="41176"/>
              <exon start="41268" stop="41436"/>
              <exon start="41618" stop="41716"/>
              <exon start="41815" stop="41873"/>
              <exon start="42783" stop="42888"/>
              <exon start="43129" stop="43195"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U604579" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGTTTGGCTTTCAACTATTCATAGAACAGAGAAGCAGGAATTATTAGTCCTCCACCAACTGTTGAATTGGTCCATAGCTG : GCTTCTCGATGATACTCCCACTCTTTTCAGCTACTGGTCTCTTATCCAGGCTGACTTCCATTTTCCTTGGCGTTGCACCTCCCTTCCTGCTTCTATCAATCGG : TTATGAAGCAGTCTTCTATGGTGCTCTCAGTCTTGCACTTATAGCATGGATACTGGCGGAAAATGCTTATCTCCATATAAGCAAGTTCAGATCATCAGCTCCAGTCAAATCCATGGAGGATGATAATAGGTGTCTGGAGTTATCCGATATGAGGATCCCATTAACTTTT : ATGGTCTTTTTCAATATTGCATTCTTTGGAACTGGTAATTTTGCAAGTATTGCAAGTTTTGAGATCTCCTCCGTGTATCGATTCATTACAATTTTCAGT : CCTTTTCTGATGGCGGCATTACTTATTTTCAAGCTGTTGATACCATTCATACTTGTCAT : ATGTGCGTTCAGTGCAATCACAAAATTGGTGCAAGTTCCATTGTTGGGATGCTATTTTCTGGTGATCTTGTGCTCTGATGTAATGACAATCCATTTCTTCTTCCTG : GTCCGAAATAAAGGAAGCTGGATGGAAATTGGCAACAGCATTAGCCATTTCGGAATTATGAGTGCTC</gDNA_template>
            <first_frame> G  L  A  F  N  Y  S  *  N  R  E  A  G  I  I  S  P  P  P  T  V  E  L  V  H  S  W :   L  L  D  D  T  P  T  L  F  S  Y  W  S  L  I  Q  A  D  F  H  F  P  W  R  C  T  S  L  P  A  S  I  N  R  :  L  *  S  S  L  L  W  C  S  Q  S  C  T  Y  S  M  D  T  G  G  K  C  L  S  P  Y  K  Q  V  Q  I  I  S  S  S  Q  I  H  G  G  *  *  *  V  S  G  V  I  R  Y  E  D  P  I  N  F   : Y  G  L  F  Q  Y  C  I  L  W  N  W  *  F  C  K  Y  C  K  F  *  D  L  L  R  V  S  I  H  Y  N  F  Q   : S  F  S  D  G  G  I  T  Y  F  Q  A  V  D  T  I  H  T  C  H  :  M  C  V  Q  C  N  H  K  I  G  A  S  S  I  V  G  M  L  F  S  G  D  L  V  L  *  C  N  D  N  P  F  L  L  P   : G  P  K  *  R  K  L  D  G  N  W  Q  Q  H  *  P  F  R  N  Y  E  C   </first_frame>
            <second_frame>  V  W  L  S  T  I  H  R  T  E  K  Q  E  L  L  V  L  H  Q  L  L  N  W  S  I  A   : G  F  S  M  I  L  P  L  F  S  A  T  G  L  L  S  R  L  T  S  I  F  L  G  V  A  P  P  F  L  L  L  S  I  G :   Y  E  A  V  F  Y  G  A  L  S  L  A  L  I  A  W  I  L  A  E  N  A  Y  L  H  I  S  K  F  R  S  S  A  P  V  K  S  M  E  D  D  N  R  C  L  E  L  S  D  M  R  I  P  L  T  F  :  M  V  F  F  N  I  A  F  F  G  T  G  N  F  A  S  I  A  S  F  E  I  S  S  V  Y  R  F  I  T  I  F  S  :  P  F  L  M  A  A  L  L  I  F  K  L  L  I  P  F  I  L  V  I :   C  A  F  S  A  I  T  K  L  V  Q  V  P  L  L  G  C  Y  F  L  V  I  L  C  S  D  V  M  T  I  H  F  F  F  L  :  V  R  N  K  G  S  W  M  E  I  G  N  S  I  S  H  F  G  I  M  S  A  </second_frame>
            <third_frame>   F  G  F  Q  L  F  I  E  Q  R  S  R  N  Y  *  S  S  T  N  C  *  I  G  P  *  L  :  A  S  R  *  Y  S  H  S  F  Q  L  L  V  S  Y  P  G  *  L  P  F  S  L  A  L  H  L  P  S  C  F  Y  Q  S   : V  M  K  Q  S  S  M  V  L  S  V  L  H  L  *  H  G  Y  W  R  K  M  L  I  S  I  *  A  S  S  D  H  Q  L  Q  S  N  P  W  R  M  I  I  G  V  W  S  Y  P  I  *  G  S  H  *  L  L :   W  S  F  S  I  L  H  S  L  E  L  V  I  L  Q  V  L  Q  V  L  R  S  P  P  C  I  D  S  L  Q  F  S  V :   L  F  *  W  R  H  Y  L  F  S  S  C  *  Y  H  S  Y  L  S   : Y  V  R  S  V  Q  S  Q  N  W  C  K  F  H  C  W  D  A  I  F  W  *  S  C  A  L  M  *  *  Q  S  I  S  S  S  W :   S  E  I  K  E  A  G  W  K  L  A  T  A  L  A  I  S  E  L  *  V  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0014P22.2" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="39985" stop="40063"/>
                    <exon start="41074" stop="41176"/>
                    <exon start="41268" stop="41436"/>
                    <exon start="41618" stop="41716"/>
                    <exon start="41815" stop="41873"/>
                    <exon start="42783" stop="42888"/>
                    <exon start="43129" stop="43194"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>681</number_coding_nucleotides>
                  <number_encoded_amino_acids>227</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VWLSTIHRTEKQELLVLHQLLNWSIAGFSMILPLFSATGLLSRLTSIFLGVAPPFLLLSIGYEAVFYGALSLALIAWILAENAYLHISKFRSSAPVKSMEDDNRCLELSDMRIPLTFMVFFNIAFFGTGNFASIASFEISSVYRFITIFSPFLMAALLIFKLLIPFILVICAFSAITKLVQVPLLGCYFLVILCSDVMTIHFFFLVRNKGSWMEIGNSISHFGIMSA</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="44313" PGL_stop="45526"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="44313" e_stop="44375"/>
            <exon e_start="44909" e_stop="45526"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.841" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="44313" e_stop="44375" e_length="63"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.841">
            <gDNA_intron_boundary i_start="44376" i_stop="44908" i_length="533"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="44909" e_stop="45526" e_length="618"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44313" stop="44375"/>
              <exon start="44909" stop="45526"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U597345" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTCCTCTGTGTTAGGGCAGAAAAATCTGAAGCTGATTCCTCCATTTTCTTCCACAAACGAAAG : AATGTTCAACACCAACTTCTGCAATCGCCGGCACGGCTAGGCCTGCCAACTCCCAGTTCACCTTCTCTACAAAACACAACTCCTCCTACTAAGTTCTCCTCGCAAGCGTCGCAACCCAATCAACAGGCAAATATATTAACTACCACTACCACCTCATCAACGCTCCTTCCTCTTCTCCCACCTCTCTCTAGAGCTCAGTCTCTTCTCATTCAAATGGCGTCTCTTGCGTCAAGGCTCTTTGAAGTCTCACCTAACCGGTCCCATTGGCTTAGTGCTTTTCGTGGCTCTTTCCCTTCATTTCTGCCTTCTACAGCACCAGTTCCACAAGATTCCAGCCCATCGTCCTCAAAAGAAATCCTCTCAGCGTTTACTTCTCTTCAGACACAGCTGTTTGAAGCAGTTGCTGAACTACAAGAAATACTTGATCTTCAAGATGAGAAGCAAAAAGTCACCCGTGAAATTAGGTTAAATGATTCTGCAATTCTTGCCTTCGCCAACAAACTCAAAGGAGCTGAGCATGTTCTTGACAATCTTGTTGATGACTATGCTGACTATCGTCGCCCCAAACGGGCCAAGTTGGAAAACGATACTGAAGAATCTTCATTAACATCTGTGGCG</gDNA_template>
            <first_frame> L  L  C  V  R  A  E  K  S  E  A  D  S  S  I  F  F  H  K  R  K  :  N  V  Q  H  Q  L  L  Q  S  P  A  R  L  G  L  P  T  P  S  S  P  S  L  Q  N  T  T  P  P  T  K  F  S  S  Q  A  S  Q  P  N  Q  Q  A  N  I  L  T  T  T  T  T  S  S  T  L  L  P  L  L  P  P  L  S  R  A  Q  S  L  L  I  Q  M  A  S  L  A  S  R  L  F  E  V  S  P  N  R  S  H  W  L  S  A  F  R  G  S  F  P  S  F  L  P  S  T  A  P  V  P  Q  D  S  S  P  S  S  S  K  E  I  L  S  A  F  T  S  L  Q  T  Q  L  F  E  A  V  A  E  L  Q  E  I  L  D  L  Q  D  E  K  Q  K  V  T  R  E  I  R  L  N  D  S  A  I  L  A  F  A  N  K  L  K  G  A  E  H  V  L  D  N  L  V  D  D  Y  A  D  Y  R  R  P  K  R  A  K  L  E  N  D  T  E  E  S  S  L  T  S  V  A </first_frame>
            <second_frame>  S  S  V  L  G  Q  K  N  L  K  L  I  P  P  F  S  S  T  N  E  R :   M  F  N  T  N  F  C  N  R  R  H  G  *  A  C  Q  L  P  V  H  L  L  Y  K  T  Q  L  L  L  L  S  S  P  R  K  R  R  N  P  I  N  R  Q  I  Y  *  L  P  L  P  P  H  Q  R  S  F  L  F  S  H  L  S  L  E  L  S  L  F  S  F  K  W  R  L  L  R  Q  G  S  L  K  S  H  L  T  G  P  I  G  L  V  L  F  V  A  L  S  L  H  F  C  L  L  Q  H  Q  F  H  K  I  P  A  H  R  P  Q  K  K  S  S  Q  R  L  L  L  F  R  H  S  C  L  K  Q  L  L  N  Y  K  K  Y  L  I  F  K  M  R  S  K  K  S  P  V  K  L  G  *  M  I  L  Q  F  L  P  S  P  T  N  S  K  E  L  S  M  F  L  T  I  L  L  M  T  M  L  T  I  V  A  P  N  G  P  S  W  K  T  I  L  K  N  L  H  *  H  L  W   </second_frame>
            <third_frame>   P  L  C  *  G  R  K  I  *  S  *  F  L  H  F  L  P  Q  T  K   : E  C  S  T  P  T  S  A  I  A  G  T  A  R  P  A  N  S  Q  F  T  F  S  T  K  H  N  S  S  Y  *  V  L  L  A  S  V  A  T  Q  S  T  G  K  Y  I  N  Y  H  Y  H  L  I  N  A  P  S  S  S  P  T  S  L  *  S  S  V  S  S  H  S  N  G  V  S  C  V  K  A  L  *  S  L  T  *  P  V  P  L  A  *  C  F  S  W  L  F  P  F  I  S  A  F  Y  S  T  S  S  T  R  F  Q  P  I  V  L  K  R  N  P  L  S  V  Y  F  S  S  D  T  A  V  *  S  S  C  *  T  T  R  N  T  *  S  S  R  *  E  A  K  S  H  P  *  N  *  V  K  *  F  C  N  S  C  L  R  Q  Q  T  Q  R  S  *  A  C  S  *  Q  S  C  *  *  L  C  *  L  S  S  P  Q  T  G  Q  V  G  K  R  Y  *  R  I  F  I  N  I  C  G  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0014P22.2" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="44313" stop="44375"/>
                    <exon start="44909" stop="45526"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>681</number_coding_nucleotides>
                  <number_encoded_amino_acids>227</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLCVRAEKSEADSSIFFHKRKNVQHQLLQSPARLGLPTPSSPSLQNTTPPTKFSSQASQPNQQANILTTTTTSSTLLPLLPPLSRAQSLLIQMASLASRLFEVSPNRSHWLSAFRGSFPSFLPSTAPVPQDSSPSSSKEILSAFTSLQTQLFEAVAELQEILDLQDEKQKVTREIRLNDSAILAFANKLKGAEHVLDNLVDDYADYRRPKRAKLENDTEESSLTSVA</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="51364" PGL_stop="52843"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="51364" e_stop="52843"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="51364" e_stop="52843" e_length="1480"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51364" stop="52394"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U573799" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51863" stop="52843"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U573800" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGAAAAGCACTTGGACTTATGGAAGAAAATGAGAGAGGAACATGTTTCATTAAATAAAAAATAAAAACATATATCATTGAATGAAGAGAAGTGAGAAATATGAAGACCCCATTGAAGCCCTCCAGCTATTTCCCATCCCCCATTTACCTATTTCCCTCTCCTTTTTTTAGCCATTTTTTTCTATTAACTTTCCCTTCTCAAACACTGAGCTGAAAAACAGAGCAAATGGGTTTAACTCTTCTGCTTTTTCTTTGCTTCTCTGTTATCTTAACTCCTTCTTTATCACAGCACCATTCGCCGCTAAATACTGCTTATTACCGGAGATCATGTCCAAGATTTGAACAAATTATGCAAGAAACCACTACAAACAAACAGATCACTTCACCTACTACCGCCGCCGCTACCCTCCGTCTCTTCTTCCACGACTGCTTCGTCGGCGGCTGCGACGCGTCCATCCTCGTCTCCTCCACTCCTTTCAACAAAGCTGAACGTGACGCAGAAATCAACCTATCACTCCCCGGCGATGGGTTCGATGTAGTCGTACGCGCCAAAACGGCGCTTGAACTTGCTTGCCCCGGCGTTGTCTCTTGCTCCGACATTCTCGCCGTCGCTGCCCGGAATCTCGTTGTTCAAACCGGAGGCCCGTTTTATCCAGTTAATTTGGGCCGTAAAGATTCTTTTACTTCTAAAGCTTCGTTGGTTGAAGGAAATCTGCCCCGACCCACAATGTCGATGGATCAAATCATACAAATTTTCGGGTCAAGAGGGTTTTCGGTACCGGAAATGGTAGCGTTATCCGGTGCTCACACAATTGGGTTTTCCCATTGTAAAGAGTTCAGCTCAAATCTTTACAATTACAACAAAACTTCCCAATATGATCCTTCTTACAATCCCAGATTTGCTCAAGCTTTGAGAAATGCTTGTAATAATTTCCAGAAAGATCCAACATTGTCCGTTTTCAACGACATCATGACTCCGAATAAGTTTGACAACATGTATTACCAGAACTTACCCAAGGGTTTGGGTCTGTTGTCTTCGGACCGGGGTCTGTTTTCAGATCCGAGGACAAGAGTTCATGTTGAAGAGTATATTAGAGATCAAAATGCATTCTTTAAGGCGTTTGCTTCAGCAATGCAGAAGCTAAGTGATCATGGTGTTAAAATTGGGAGAAGTGGTGAGATCAGACACAGATGTGATGCTTTCAACAATTAAACTATTTGAGGGGTATTGATTATGTTACTGTACGTTCGAATTTTTTGTTGAATTTAATCACTCACAAGACGAAAGTAAAACTTATAATATGTATACAATGTTTTTTACTATCATTTTTATTAAGATTACAAGGCTCTGCTTCAGTTCTGCTTTTAGAACAACTACTACTACTACTACTTGTGATTAGTGTGTGTTGAGATGCAGGTAAGAGGCTGTTTGTTCGTCGAATTTGATTCAATAAGAAATGAAACCGTAAATAAAGTTTGCT</gDNA_template>
            <first_frame> R  K  A  L  G  L  M  E  E  N  E  R  G  T  C  F  I  K  *  K  I  K  T  Y  I  I  E  *  R  E  V  R  N  M  K  T  P  L  K  P  S  S  Y  F  P  S  P  I  Y  L  F  P  S  P  F  F  S  H  F  F  L  L  T  F  P  S  Q  T  L  S  *  K  T  E  Q  M  G  L  T  L  L  L  F  L  C  F  S  V  I  L  T  P  S  L  S  Q  H  H  S  P  L  N  T  A  Y  Y  R  R  S  C  P  R  F  E  Q  I  M  Q  E  T  T  T  N  K  Q  I  T  S  P  T  T  A  A  A  T  L  R  L  F  F  H  D  C  F  V  G  G  C  D  A  S  I  L  V  S  S  T  P  F  N  K  A  E  R  D  A  E  I  N  L  S  L  P  G  D  G  F  D  V  V  V  R  A  K  T  A  L  E  L  A  C  P  G  V  V  S  C  S  D  I  L  A  V  A  A  R  N  L  V  V  Q  T  G  G  P  F  Y  P  V  N  L  G  R  K  D  S  F  T  S  K  A  S  L  V  E  G  N  L  P  R  P  T  M  S  M  D  Q  I  I  Q  I  F  G  S  R  G  F  S  V  P  E  M  V  A  L  S  G  A  H  T  I  G  F  S  H  C  K  E  F  S  S  N  L  Y  N  Y  N  K  T  S  Q  Y  D  P  S  Y  N  P  R  F  A  Q  A  L  R  N  A  C  N  N  F  Q  K  D  P  T  L  S  V  F  N  D  I  M  T  P  N  K  F  D  N  M  Y  Y  Q  N  L  P  K  G  L  G  L  L  S  S  D  R  G  L  F  S  D  P  R  T  R  V  H  V  E  E  Y  I  R  D  Q  N  A  F  F  K  A  F  A  S  A  M  Q  K  L  S  D  H  G  V  K  I  G  R  S  G  E  I  R  H  R  C  D  A  F  N  N  *  T  I  *  G  V  L  I  M  L  L  Y  V  R  I  F  C  *  I  *  S  L  T  R  R  K  *  N  L  *  Y  V  Y  N  V  F  Y  Y  H  F  Y  *  D  Y  K  A  L  L  Q  F  C  F  *  N  N  Y  Y  Y  Y  Y  L  *  L  V  C  V  E  M  Q  V  R  G  C  L  F  V  E  F  D  S  I  R  N  E  T  V  N  K  V  C  </first_frame>
            <second_frame>  E  K  H  L  D  L  W  K  K  M  R  E  E  H  V  S  L  N  K  K  *  K  H  I  S  L  N  E  E  K  *  E  I  *  R  P  H  *  S  P  P  A  I  S  H  P  P  F  T  Y  F  P  L  L  F  L  A  I  F  F  Y  *  L  S  L  L  K  H  *  A  E  K  Q  S  K  W  V  *  L  F  C  F  F  F  A  S  L  L  S  *  L  L  L  Y  H  S  T  I  R  R  *  I  L  L  I  T  G  D  H  V  Q  D  L  N  K  L  C  K  K  P  L  Q  T  N  R  S  L  H  L  L  P  P  P  L  P  S  V  S  S  S  T  T  A  S  S  A  A  A  T  R  P  S  S  S  P  P  L  L  S  T  K  L  N  V  T  Q  K  S  T  Y  H  S  P  A  M  G  S  M  *  S  Y  A  P  K  R  R  L  N  L  L  A  P  A  L  S  L  A  P  T  F  S  P  S  L  P  G  I  S  L  F  K  P  E  A  R  F  I  Q  L  I  W  A  V  K  I  L  L  L  L  K  L  R  W  L  K  E  I  C  P  D  P  Q  C  R  W  I  K  S  Y  K  F  S  G  Q  E  G  F  R  Y  R  K  W  *  R  Y  P  V  L  T  Q  L  G  F  P  I  V  K  S  S  A  Q  I  F  T  I  T  T  K  L  P  N  M  I  L  L  T  I  P  D  L  L  K  L  *  E  M  L  V  I  I  S  R  K  I  Q  H  C  P  F  S  T  T  S  *  L  R  I  S  L  T  T  C  I  T  R  T  Y  P  R  V  W  V  C  C  L  R  T  G  V  C  F  Q  I  R  G  Q  E  F  M  L  K  S  I  L  E  I  K  M  H  S  L  R  R  L  L  Q  Q  C  R  S  *  V  I  M  V  L  K  L  G  E  V  V  R  S  D  T  D  V  M  L  S  T  I  K  L  F  E  G  Y  *  L  C  Y  C  T  F  E  F  F  V  E  F  N  H  S  Q  D  E  S  K  T  Y  N  M  Y  T  M  F  F  T  I  I  F  I  K  I  T  R  L  C  F  S  S  A  F  R  T  T  T  T  T  T  T  C  D  *  C  V  L  R  C  R  *  E  A  V  C  S  S  N  L  I  Q  *  E  M  K  P  *  I  K  F  A </second_frame>
            <third_frame>   K  S  T  W  T  Y  G  R  K  *  E  R  N  M  F  H  *  I  K  N  K  N  I  Y  H  *  M  K  R  S  E  K  Y  E  D  P  I  E  A  L  Q  L  F  P  I  P  H  L  P  I  S  L  S  F  F  *  P  F  F  S  I  N  F  P  F  S  N  T  E  L  K  N  R  A  N  G  F  N  S  S  A  F  S  L  L  L  C  Y  L  N  S  F  F  I  T  A  P  F  A  A  K  Y  C  L  L  P  E  I  M  S  K  I  *  T  N  Y  A  R  N  H  Y  K  Q  T  D  H  F  T  Y  Y  R  R  R  Y  P  P  S  L  L  P  R  L  L  R  R  R  L  R  R  V  H  P  R  L  L  H  S  F  Q  Q  S  *  T  *  R  R  N  Q  P  I  T  P  R  R  W  V  R  C  S  R  T  R  Q  N  G  A  *  T  C  L  P  R  R  C  L  L  L  R  H  S  R  R  R  C  P  E  S  R  C  S  N  R  R  P  V  L  S  S  *  F  G  P  *  R  F  F  Y  F  *  S  F  V  G  *  R  K  S  A  P  T  H  N  V  D  G  S  N  H  T  N  F  R  V  K  R  V  F  G  T  G  N  G  S  V  I  R  C  S  H  N  W  V  F  P  L  *  R  V  Q  L  K  S  L  Q  L  Q  Q  N  F  P  I  *  S  F  L  Q  S  Q  I  C  S  S  F  E  K  C  L  *  *  F  P  E  R  S  N  I  V  R  F  Q  R  H  H  D  S  E  *  V  *  Q  H  V  L  P  E  L  T  Q  G  F  G  S  V  V  F  G  P  G  S  V  F  R  S  E  D  K  S  S  C  *  R  V  Y  *  R  S  K  C  I  L  *  G  V  C  F  S  N  A  E  A  K  *  S  W  C  *  N  W  E  K  W  *  D  Q  T  Q  M  *  C  F  Q  Q  L  N  Y  L  R  G  I  D  Y  V  T  V  R  S  N  F  L  L  N  L  I  T  H  K  T  K  V  K  L  I  I  C  I  Q  C  F  L  L  S  F  L  L  R  L  Q  G  S  A  S  V  L  L  L  E  Q  L  L  L  L  L  L  V  I  S  V  C  *  D  A  G  K  R  L  F  V  R  R  I  *  F  N  K  K  *  N  R  K  *  S  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0014P22.2" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="51577" stop="52575"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>996</number_coding_nucleotides>
                  <number_encoded_amino_acids>332</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KTEQMGLTLLLFLCFSVILTPSLSQHHSPLNTAYYRRSCPRFEQIMQETTTNKQITSPTTAAATLRLFFHDCFVGGCDASILVSSTPFNKAERDAEINLSLPGDGFDVVVRAKTALELACPGVVSCSDILAVAARNLVVQTGGPFYPVNLGRKDSFTSKASLVEGNLPRPTMSMDQIIQIFGSRGFSVPEMVALSGAHTIGFSHCKEFSSNLYNYNKTSQYDPSYNPRFAQALRNACNNFQKDPTLSVFNDIMTPNKFDNMYYQNLPKGLGLLSSDRGLFSDPRTRVHVEEYIRDQNAFFKAFASAMQKLSDHGVKIGRSGEIRHRCDAFNN*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0014P22.2" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="52560" stop="52772"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CFQQLNYLRGIDYVTVRSNFLLNLITHKTKVKLIICIQCFLLSFLLRLQGSASVLLLEQLLLLLLVISVC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="53520" PGL_stop="54988"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="53520" e_stop="54988"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="53520" e_stop="54988" e_length="1469"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53520" stop="53804"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U577105" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53786" stop="54988"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U568033" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAATCGAACCAAGTAATTGAAACGAAAAAAATGACAATACAATCTGTAATGAAAAATCTTTCAAAATTGTTGGCATGTAAAAGTCAGCATTAAGGAAATAAAAGAGAATGGAAGGGCTAAGCAGGGTTCAGAAGTTATACATTAACTTATCCCAGTGTAAAAATACTTGAGCAATTGTAGCTATTGCTCATGCACTAAAAGTCCAGTGTAAAAATTTTAGTGCAGAAATTGTAACCTTCCCAGTAGCACCACACATCACATCAGAGTAAAGATTGTGTCAATGGTACACTCTCTTCATTCTTGCTTTCACTGTTTGAGCATCAAGATGCTCAAAAATGAAAAACAACTCTGGAGTTCATTGCATTTGCTCTGCAGCAATGTTTATTGCAATGCAGACCTTAAAGAAACATGAGAATAACAATTCTCTAACAACTTCCGCAGTTGCAGCAATCAATCAACTCCAGCATAAATACCAAATTACTAGACAGCGGCTTGTGGAAGCCACGAACAGTGCATAGAATAAGCCTCAGGCACACAAGAAAGTGAAAATAGCATTGCTTGAAGAGTATTAGGAGACAATGAGTTCATGTTAAAGACAGCCTCTTTTCTCCAAAAACTAAAACACACTGTTCAGAATCTTTCTTTACACCTCCAACATTATTTACCATGTCAACTGTCACATGACCTCAGAAGACACGACGAGCAAAACCAAAACCAAAATCATGCTATCCGAAGCTATGCAAAGAGAAAACCGTGCCTAATTACAAGCCATTTCTCAGAAAAAGGAATGAAATAGCATACAGTGAAGAAACAGAAACAAACAAGAGCTATGAAGAACTTATCCGTGCTTGACTGATATCATCATCCGAATTAAGCAACTTCTCCCAATCAACTTCCTCCTCTTCATCCTTCTGCCTCAAAACCTCCAATATCTTTCTAACTTTATCCTTGGCCCTTTCACTTCCCATTTCCTCAACTTGTATCAACAGCTCCTCCGCAGCAGCCTCTTTTGCCAACCCTTTAAACCTAAGGCCACCATGACTAAGTCCATATAATGCAGCAAGACAATTCTCACGAGTCGACTCCGATTCAAACTCTCCCTTTCTCAACATACATACAAAACACTCCACTGCACCCCCATCAAGCATTGCTGCTCTCCCTTCAGAGCTCGCAGCCAGGTTACAAAGTATCAACAGAATCCGACCCATCATATGACCCGTTTTAACCATGCCTAGTAATGCCTGAACCGCCCCGAGTTTCACCAATTTAGCCCTGTTACTCTGAACTAAAGTGAGGTGATATAGAGCCAGAGCCGAATCATGCCTAGTTCGTTCCGATTCAGATCGAAGGGCATGAAGAAGTGGAGGCAGAGCTCCTAATACCCCAATTGCAGTTTTGTTCTGATCATCTAACGCTAAACTGAAAAGTGCACCAGCAACATGTTCCTGTGATTCTTGGAATCCACTTTT</gDNA_template>
            <first_frame> Q  S  N  Q  V  I  E  T  K  K  M  T  I  Q  S  V  M  K  N  L  S  K  L  L  A  C  K  S  Q  H  *  G  N  K  R  E  W  K  G  *  A  G  F  R  S  Y  T  L  T  Y  P  S  V  K  I  L  E  Q  L  *  L  L  L  M  H  *  K  S  S  V  K  I  L  V  Q  K  L  *  P  S  Q  *  H  H  T  S  H  Q  S  K  D  C  V  N  G  T  L  S  S  F  L  L  S  L  F  E  H  Q  D  A  Q  K  *  K  T  T  L  E  F  I  A  F  A  L  Q  Q  C  L  L  Q  C  R  P  *  R  N  M  R  I  T  I  L  *  Q  L  P  Q  L  Q  Q  S  I  N  S  S  I  N  T  K  L  L  D  S  G  L  W  K  P  R  T  V  H  R  I  S  L  R  H  T  R  K  *  K  *  H  C  L  K  S  I  R  R  Q  *  V  H  V  K  D  S  L  F  S  P  K  T  K  T  H  C  S  E  S  F  F  T  P  P  T  L  F  T  M  S  T  V  T  *  P  Q  K  T  R  R  A  K  P  K  P  K  S  C  Y  P  K  L  C  K  E  K  T  V  P  N  Y  K  P  F  L  R  K  R  N  E  I  A  Y  S  E  E  T  E  T  N  K  S  Y  E  E  L  I  R  A  *  L  I  S  S  S  E  L  S  N  F  S  Q  S  T  S  S  S  S  S  F  C  L  K  T  S  N  I  F  L  T  L  S  L  A  L  S  L  P  I  S  S  T  C  I  N  S  S  S  A  A  A  S  F  A  N  P  L  N  L  R  P  P  *  L  S  P  Y  N  A  A  R  Q  F  S  R  V  D  S  D  S  N  S  P  F  L  N  I  H  T  K  H  S  T  A  P  P  S  S  I  A  A  L  P  S  E  L  A  A  R  L  Q  S  I  N  R  I  R  P  I  I  *  P  V  L  T  M  P  S  N  A  *  T  A  P  S  F  T  N  L  A  L  L  L  *  T  K  V  R  *  Y  R  A  R  A  E  S  C  L  V  R  S  D  S  D  R  R  A  *  R  S  G  G  R  A  P  N  T  P  I  A  V  L  F  *  S  S  N  A  K  L  K  S  A  P  A  T  C  S  C  D  S  W  N  P  L   </first_frame>
            <second_frame>  N  R  T  K  *  L  K  R  K  K  *  Q  Y  N  L  *  *  K  I  F  Q  N  C  W  H  V  K  V  S  I  K  E  I  K  E  N  G  R  A  K  Q  G  S  E  V  I  H  *  L  I  P  V  *  K  Y  L  S  N  C  S  Y  C  S  C  T  K  S  P  V  *  K  F  *  C  R  N  C  N  L  P  S  S  T  T  H  H  I  R  V  K  I  V  S  M  V  H  S  L  H  S  C  F  H  C  L  S  I  K  M  L  K  N  E  K  Q  L  W  S  S  L  H  L  L  C  S  N  V  Y  C  N  A  D  L  K  E  T  *  E  *  Q  F  S  N  N  F  R  S  C  S  N  Q  S  T  P  A  *  I  P  N  Y  *  T  A  A  C  G  S  H  E  Q  C  I  E  *  A  S  G  T  Q  E  S  E  N  S  I  A  *  R  V  L  G  D  N  E  F  M  L  K  T  A  S  F  L  Q  K  L  K  H  T  V  Q  N  L  S  L  H  L  Q  H  Y  L  P  C  Q  L  S  H  D  L  R  R  H  D  E  Q  N  Q  N  Q  N  H  A  I  R  S  Y  A  K  R  K  P  C  L  I  T  S  H  F  S  E  K  G  M  K  *  H  T  V  K  K  Q  K  Q  T  R  A  M  K  N  L  S  V  L  D  *  Y  H  H  P  N  *  A  T  S  P  N  Q  L  P  P  L  H  P  S  A  S  K  P  P  I  S  F  *  L  Y  P  W  P  F  H  F  P  F  P  Q  L  V  S  T  A  P  P  Q  Q  P  L  L  P  T  L  *  T  *  G  H  H  D  *  V  H  I  M  Q  Q  D  N  S  H  E  S  T  P  I  Q  T  L  P  F  S  T  Y  I  Q  N  T  P  L  H  P  H  Q  A  L  L  L  S  L  Q  S  S  Q  P  G  Y  K  V  S  T  E  S  D  P  S  Y  D  P  F  *  P  C  L  V  M  P  E  P  P  R  V  S  P  I  *  P  C  Y  S  E  L  K  *  G  D  I  E  P  E  P  N  H  A  *  F  V  P  I  Q  I  E  G  H  E  E  V  E  A  E  L  L  I  P  Q  L  Q  F  C  S  D  H  L  T  L  N  *  K  V  H  Q  Q  H  V  P  V  I  L  G  I  H  F  </second_frame>
            <third_frame>   I  E  P  S  N  *  N  E  K  N  D  N  T  I  C  N  E  K  S  F  K  I  V  G  M  *  K  S  A  L  R  K  *  K  R  M  E  G  L  S  R  V  Q  K  L  Y  I  N  L  S  Q  C  K  N  T  *  A  I  V  A  I  A  H  A  L  K  V  Q  C  K  N  F  S  A  E  I  V  T  F  P  V  A  P  H  I  T  S  E  *  R  L  C  Q  W  Y  T  L  F  I  L  A  F  T  V  *  A  S  R  C  S  K  M  K  N  N  S  G  V  H  C  I  C  S  A  A  M  F  I  A  M  Q  T  L  K  K  H  E  N  N  N  S  L  T  T  S  A  V  A  A  I  N  Q  L  Q  H  K  Y  Q  I  T  R  Q  R  L  V  E  A  T  N  S  A  *  N  K  P  Q  A  H  K  K  V  K  I  A  L  L  E  E  Y  *  E  T  M  S  S  C  *  R  Q  P  L  F  S  K  N  *  N  T  L  F  R  I  F  L  Y  T  S  N  I  I  Y  H  V  N  C  H  M  T  S  E  D  T  T  S  K  T  K  T  K  I  M  L  S  E  A  M  Q  R  E  N  R  A  *  L  Q  A  I  S  Q  K  K  E  *  N  S  I  Q  *  R  N  R  N  K  Q  E  L  *  R  T  Y  P  C  L  T  D  I  I  I  R  I  K  Q  L  L  P  I  N  F  L  L  F  I  L  L  P  Q  N  L  Q  Y  L  S  N  F  I  L  G  P  F  T  S  H  F  L  N  L  Y  Q  Q  L  L  R  S  S  L  F  C  Q  P  F  K  P  K  A  T  M  T  K  S  I  *  C  S  K  T  I  L  T  S  R  L  R  F  K  L  S  L  S  Q  H  T  Y  K  T  L  H  C  T  P  I  K  H  C  C  S  P  F  R  A  R  S  Q  V  T  K  Y  Q  Q  N  P  T  H  H  M  T  R  F  N  H  A  *  *  C  L  N  R  P  E  F  H  Q  F  S  P  V  T  L  N  *  S  E  V  I  *  S  Q  S  R  I  M  P  S  S  F  R  F  R  S  K  G  M  K  K  W  R  Q  S  S  *  Y  P  N  C  S  F  V  L  I  I  *  R  *  T  E  K  C  T  S  N  M  F  L  *  F  L  E  S  T  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0014P22.2" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="54082" stop="54315"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>231</number_coding_nucleotides>
                  <number_encoded_amino_acids>77</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RVLGDNEFMLKTASFLQKLKHTVQNLSLHLQHYLPCQLSHDLRRHDEQNQNQNHAIRSYAKRKPCLITSHFSEKGMK*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0014P22.2" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="54353" stop="54574"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>219</number_coding_nucleotides>
                  <number_encoded_amino_acids>73</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RTYPCLTDIIIRIKQLLPINFLLFILLPQNLQYLSNFILGPFTSHFLNLYQQLLRSSLFCQPFKPKATMTKSI*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0014P22.2" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="53837" stop="54037"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ASRCSKMKNNSGVHCICSAAMFIAMQTLKKHENNNSLTTSAVAAINQLQHKYQITRQRLVEATNSA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="56003" PGL_stop="54953"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="56003" e_stop="54953"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="56003" e_stop="54953" e_length="1051"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="56003" stop="54953"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U581762" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACGAGTACAGAGCTCTCAGTACTAAACATCCAATTTTCTGTTTCACTATCAGCTTCCTCTCTCCAAATCTCAGTCTGTCATAATGAAGATGTACACTTTTGCTCATCTCCTCAACAGGCTCAAAGTTGAATTTTTGAAACCTTTTGTTTTCATTCATATTTGAACCTCAAAGATTGAATCTTGAAACTTCTTTTTTTTTTTCTTCATTGAAATGGGTACTAGCAAGCAAAGATGGAGAATTTCATTTCACAAGTCTCCATCAAAACAACCTCCTATTCCTATAGAATTTGTCTGTCCTATTTCTGGTTCTCTCATGGCTGACCCTGTAATCGTTTCTTCAGGCCATACTTTTGAGCGTCATTGTGTTCATGCCTGCAAATCACTTTCTTTTACCCCTGTTCTTCCTGATGGCTCTGTTCCTGATTTCTCTACTGTGATCCCTAACTTAGCTCTCAAGTCTACAATCCTCAATTTTTGCCGTTCTTCTTTTCTTGACCCACCAAAACCCATCAATTTTCTCACAGCTGAAAATCTCGTTTTCACATTGAAGGCCACCCGAAAACCCCAAGATGCTACAAGATTTAATGGCGTCCGGGTTATGCAGACGGAAACTGAACTGAACCGGGTACCGAGTCACATATCAATGAGTTCAGAGGAATCTGTGACTCCTAGAAGTGGACCCACTTATTACTCTTCGTCGTCAGCCTCTGACTTTGAAACCCTAAACCCAAATTCCTTTGAAGAAGATGAACTACTTGTGAAATTGAAGAGTTCCCAAATATCTGAACAAGAAGAAGCTGTCATCTCGTTTCGAAAATTGACCCGAACCCGTGAAGAAACCCGGTTCCAGTTATGCACTCCGCGTATACTTTCAGCTCTACGTGTACTCATCACTTCAAGGTATGTTTCTGTACAAGTAAATTCAGTAGCGGCATTGGTAAATTTGTCGTTAGAGAATCGAAACAAGGTGAAAATTTTACGGTCTGGAATTGTTCCGTCTTTGATTGACGTGTTGAAAAGTGGATTCCAAGAATCACAGGAACATGTTGCT</gDNA_template>
            <first_frame> T  S  T  E  L  S  V  L  N  I  Q  F  S  V  S  L  S  A  S  S  L  Q  I  S  V  C  H  N  E  D  V  H  F  C  S  S  P  Q  Q  A  Q  S  *  I  F  E  T  F  C  F  H  S  Y  L  N  L  K  D  *  I  L  K  L  L  F  F  F  L  H  *  N  G  Y  *  Q  A  K  M  E  N  F  I  S  Q  V  S  I  K  T  T  S  Y  S  Y  R  I  C  L  S  Y  F  W  F  S  H  G  *  P  C  N  R  F  F  R  P  Y  F  *  A  S  L  C  S  C  L  Q  I  T  F  F  Y  P  C  S  S  *  W  L  C  S  *  F  L  Y  C  D  P  *  L  S  S  Q  V  Y  N  P  Q  F  L  P  F  F  F  S  *  P  T  K  T  H  Q  F  S  H  S  *  K  S  R  F  H  I  E  G  H  P  K  T  P  R  C  Y  K  I  *  W  R  P  G  Y  A  D  G  N  *  T  E  P  G  T  E  S  H  I  N  E  F  R  G  I  C  D  S  *  K  W  T  H  L  L  L  F  V  V  S  L  *  L  *  N  P  K  P  K  F  L  *  R  R  *  T  T  C  E  I  E  E  F  P  N  I  *  T  R  R  S  C  H  L  V  S  K  I  D  P  N  P  *  R  N  P  V  P  V  M  H  S  A  Y  T  F  S  S  T  C  T  H  H  F  K  V  C  F  C  T  S  K  F  S  S  G  I  G  K  F  V  V  R  E  S  K  Q  G  E  N  F  T  V  W  N  C  S  V  F  D  *  R  V  E  K  W  I  P  R  I  T  G  T  C  C  </first_frame>
            <second_frame>  R  V  Q  S  S  Q  Y  *  T  S  N  F  L  F  H  Y  Q  L  P  L  S  K  S  Q  S  V  I  M  K  M  Y  T  F  A  H  L  L  N  R  L  K  V  E  F  L  K  P  F  V  F  I  H  I  *  T  S  K  I  E  S  *  N  F  F  F  F  F  F  I  E  M  G  T  S  K  Q  R  W  R  I  S  F  H  K  S  P  S  K  Q  P  P  I  P  I  E  F  V  C  P  I  S  G  S  L  M  A  D  P  V  I  V  S  S  G  H  T  F  E  R  H  C  V  H  A  C  K  S  L  S  F  T  P  V  L  P  D  G  S  V  P  D  F  S  T  V  I  P  N  L  A  L  K  S  T  I  L  N  F  C  R  S  S  F  L  D  P  P  K  P  I  N  F  L  T  A  E  N  L  V  F  T  L  K  A  T  R  K  P  Q  D  A  T  R  F  N  G  V  R  V  M  Q  T  E  T  E  L  N  R  V  P  S  H  I  S  M  S  S  E  E  S  V  T  P  R  S  G  P  T  Y  Y  S  S  S  S  A  S  D  F  E  T  L  N  P  N  S  F  E  E  D  E  L  L  V  K  L  K  S  S  Q  I  S  E  Q  E  E  A  V  I  S  F  R  K  L  T  R  T  R  E  E  T  R  F  Q  L  C  T  P  R  I  L  S  A  L  R  V  L  I  T  S  R  Y  V  S  V  Q  V  N  S  V  A  A  L  V  N  L  S  L  E  N  R  N  K  V  K  I  L  R  S  G  I  V  P  S  L  I  D  V  L  K  S  G  F  Q  E  S  Q  E  H  V  A </second_frame>
            <third_frame>   E  Y  R  A  L  S  T  K  H  P  I  F  C  F  T  I  S  F  L  S  P  N  L  S  L  S  *  *  R  C  T  L  L  L  I  S  S  T  G  S  K  L  N  F  *  N  L  L  F  S  F  I  F  E  P  Q  R  L  N  L  E  T  S  F  F  F  S  S  L  K  W  V  L  A  S  K  D  G  E  F  H  F  T  S  L  H  Q  N  N  L  L  F  L  *  N  L  S  V  L  F  L  V  L  S  W  L  T  L  *  S  F  L  Q  A  I  L  L  S  V  I  V  F  M  P  A  N  H  F  L  L  P  L  F  F  L  M  A  L  F  L  I  S  L  L  *  S  L  T  *  L  S  S  L  Q  S  S  I  F  A  V  L  L  F  L  T  H  Q  N  P  S  I  F  S  Q  L  K  I  S  F  S  H  *  R  P  P  E  N  P  K  M  L  Q  D  L  M  A  S  G  L  C  R  R  K  L  N  *  T  G  Y  R  V  T  Y  Q  *  V  Q  R  N  L  *  L  L  E  V  D  P  L  I  T  L  R  R  Q  P  L  T  L  K  P  *  T  Q  I  P  L  K  K  M  N  Y  L  *  N  *  R  V  P  K  Y  L  N  K  K  K  L  S  S  R  F  E  N  *  P  E  P  V  K  K  P  G  S  S  Y  A  L  R  V  Y  F  Q  L  Y  V  Y  S  S  L  Q  G  M  F  L  Y  K  *  I  Q  *  R  H  W  *  I  C  R  *  R  I  E  T  R  *  K  F  Y  G  L  E  L  F  R  L  *  L  T  C  *  K  V  D  S  K  N  H  R  N  M  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0014P22.2" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="55819" stop="54953"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>867</number_coding_nucleotides>
                  <number_encoded_amino_acids>289</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NFFFFFFIEMGTSKQRWRISFHKSPSKQPPIPIEFVCPISGSLMADPVIVSSGHTFERHCVHACKSLSFTPVLPDGSVPDFSTVIPNLALKSTILNFCRSSFLDPPKPINFLTAENLVFTLKATRKPQDATRFNGVRVMQTETELNRVPSHISMSSEESVTPRSGPTYYSSSSASDFETLNPNSFEEDELLVKLKSSQISEQEEAVISFRKLTRTREETRFQLCTPRILSALRVLITSRYVSVQVNSVAALVNLSLENRNKVKILRSGIVPSLIDVLKSGFQESQEHVA</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="+" PGL_start="61141" PGL_stop="61996"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="61141" e_stop="61280"/>
            <exon e_start="61387" e_stop="61996"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.947" acc_prob="1.000" e_score="0.993"/>
          <exon-only e_score="0.990"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.993">
            <gDNA_exon_boundary e_start="61141" e_stop="61280" e_length="140"/>
          </exon>
          <intron i_serial="1" don_prob="0.947" acc_prob="1.000">
            <gDNA_intron_boundary i_start="61281" i_stop="61386" i_length="106"/>
          </intron>
          <exon e_serial="2" e_score="0.990">
            <gDNA_exon_boundary e_start="61387" e_stop="61996" e_length="610"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61141" stop="61280"/>
              <exon start="61387" stop="61996"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U585267" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCAACTAGAAGAACAAAAATACACGAAAGAAGAAAATGGAAGGAGGAACAGAAGCCTATCCAGATTTAGGTAGACATTGCCAACTATCTGATTGCCATCAACTCGATTTTCTCCCTTTTACCTGCCATGCCTGTTTAAAG : GTATTTTGTGTGGAACATAGATCATGCAAGTCTCATGAATGCCCAAAATCTGACTTTAACAGCCGAATCGTTTTGGTTTGCGAAATTTGTTCTATGTCCATGGAAACTACCGGCTGTAAAGTTGAAGACCACAAAGCAATATTACAAAAACACGAGGAATCTGGGGATTGTGACCCTAAGAAGAAGAAGAAGAAACCTACCTGTCCTGTCAAAAGATGCAAGGGGATTTTGACCTTCTCAAACACTAGCACTTGCAAGATATGCCGGATTCAAGTTTGCCTCAGACACAGGTTCCCTGCTGATCACGCCTGTAACCCCACTTCTTCATCATCACAGCTGTTGCTAAAGGAACCCAATAACAAGTTTTTGACTGCTTTGCTTGCAAGGAATGGGAAAGATTGTGGGAATAAAAGTCGTGCCTCATCTCCAAGCCCTGCGAACCCTTCTGTGAAAGCTTGTTGATCGTTTCACAGCACATTACTATTCATTTGTCTTTTGTAATTACATTATTTTATGGAAAACAATGTTGTTCTATTTTCAATTTCTCCCTCCCTTCTATGATAAAACAACGAATTTAAGAATGACATAACAATTCGGAATCATATAATCT</gDNA_template>
            <first_frame> A  T  R  R  T  K  I  H  E  R  R  K  W  K  E  E  Q  K  P  I  Q  I  *  V  D  I  A  N  Y  L  I  A  I  N  S  I  F  S  L  L  P  A  M  P  V  *  R :   Y  F  V  W  N  I  D  H  A  S  L  M  N  A  Q  N  L  T  L  T  A  E  S  F  W  F  A  K  F  V  L  C  P  W  K  L  P  A  V  K  L  K  T  T  K  Q  Y  Y  K  N  T  R  N  L  G  I  V  T  L  R  R  R  R  R  N  L  P  V  L  S  K  D  A  R  G  F  *  P  S  Q  T  L  A  L  A  R  Y  A  G  F  K  F  A  S  D  T  G  S  L  L  I  T  P  V  T  P  L  L  H  H  H  S  C  C  *  R  N  P  I  T  S  F  *  L  L  C  L  Q  G  M  G  K  I  V  G  I  K  V  V  P  H  L  Q  A  L  R  T  L  L  *  K  L  V  D  R  F  T  A  H  Y  Y  S  F  V  F  C  N  Y  I  I  L  W  K  T  M  L  F  Y  F  Q  F  L  P  P  F  Y  D  K  T  T  N  L  R  M  T  *  Q  F  G  I  I  *  S </first_frame>
            <second_frame>  Q  L  E  E  Q  K  Y  T  K  E  E  N  G  R  R  N  R  S  L  S  R  F  R  *  T  L  P  T  I  *  L  P  S  T  R  F  S  P  F  Y  L  P  C  L  F  K   : G  I  L  C  G  T  *  I  M  Q  V  S  *  M  P  K  I  *  L  *  Q  P  N  R  F  G  L  R  N  L  F  Y  V  H  G  N  Y  R  L  *  S  *  R  P  Q  S  N  I  T  K  T  R  G  I  W  G  L  *  P  *  E  E  E  E  E  T  Y  L  S  C  Q  K  M  Q  G  D  F  D  L  L  K  H  *  H  L  Q  D  M  P  D  S  S  L  P  Q  T  Q  V  P  C  *  S  R  L  *  P  H  F  F  I  I  T  A  V  A  K  G  T  Q  *  Q  V  F  D  C  F  A  C  K  E  W  E  R  L  W  E  *  K  S  C  L  I  S  K  P  C  E  P  F  C  E  S  L  L  I  V  S  Q  H  I  T  I  H  L  S  F  V  I  T  L  F  Y  G  K  Q  C  C  S  I  F  N  F  S  L  P  S  M  I  K  Q  R  I  *  E  *  H  N  N  S  E  S  Y  N   </second_frame>
            <third_frame>   N  *  K  N  K  N  T  R  K  K  K  M  E  G  G  T  E  A  Y  P  D  L  G  R  H  C  Q  L  S  D  C  H  Q  L  D  F  L  P  F  T  C  H  A  C  L  K  :  V  F  C  V  E  H  R  S  C  K  S  H  E  C  P  K  S  D  F  N  S  R  I  V  L  V  C  E  I  C  S  M  S  M  E  T  T  G  C  K  V  E  D  H  K  A  I  L  Q  K  H  E  E  S  G  D  C  D  P  K  K  K  K  K  K  P  T  C  P  V  K  R  C  K  G  I  L  T  F  S  N  T  S  T  C  K  I  C  R  I  Q  V  C  L  R  H  R  F  P  A  D  H  A  C  N  P  T  S  S  S  S  Q  L  L  L  K  E  P  N  N  K  F  L  T  A  L  L  A  R  N  G  K  D  C  G  N  K  S  R  A  S  S  P  S  P  A  N  P  S  V  K  A  C  *  S  F  H  S  T  L  L  F  I  C  L  L  *  L  H  Y  F  M  E  N  N  V  V  L  F  S  I  S  P  S  L  L  *  *  N  N  E  F  K  N  D  I  T  I  R  N  H  I  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0014P22.2" strand="+"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="61149" stop="61280"/>
                    <exon start="61387" stop="61848"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>591</number_coding_nucleotides>
                  <number_encoded_amino_acids>197</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KNKNTRKKKMEGGTEAYPDLGRHCQLSDCHQLDFLPFTCHACLKVFCVEHRSCKSHECPKSDFNSRIVLVCEICSMSMETTGCKVEDHKAILQKHEESGDCDPKKKKKKPTCPVKRCKGILTFSNTSTCKICRIQVCLRHRFPADHACNPTSSSSQLLLKEPNNKFLTALLARNGKDCGNKSRASSPSPANPSVKAC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="-" PGL_start="65990" PGL_stop="61964"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="65990" e_stop="65879"/>
            <exon e_start="65783" e_stop="65478"/>
            <exon e_start="65321" e_stop="65272"/>
            <exon e_start="65151" e_stop="64649"/>
            <exon e_start="63825" e_stop="63745"/>
            <exon e_start="62608" e_stop="62546"/>
            <exon e_start="62305" e_stop="61964"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.946" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.874" e_score="0.837"/>
          <exon-intron don_prob="0.997" acc_prob="0.974" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.981" e_score="1.000"/>
          <exon-intron don_prob="0.971" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.925" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="65990" e_stop="65879" e_length="112"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.946">
            <gDNA_intron_boundary i_start="65878" i_stop="65784" i_length="95"/>
          </intron>
          <exon e_serial="2" e_score="0.837">
            <gDNA_exon_boundary e_start="65783" e_stop="65478" e_length="306"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.874">
            <gDNA_intron_boundary i_start="65477" i_stop="65322" i_length="156"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="65321" e_stop="65272" e_length="50"/>
          </exon>
          <intron i_serial="3" don_prob="0.997" acc_prob="0.974">
            <gDNA_intron_boundary i_start="65271" i_stop="65152" i_length="120"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="65151" e_stop="64649" e_length="503"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="0.981">
            <gDNA_intron_boundary i_start="64648" i_stop="63826" i_length="823"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="63825" e_stop="63745" e_length="81"/>
          </exon>
          <intron i_serial="5" don_prob="0.971" acc_prob="0.998">
            <gDNA_intron_boundary i_start="63744" i_stop="62609" i_length="1136"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="62608" e_stop="62546" e_length="63"/>
          </exon>
          <intron i_serial="6" don_prob="0.986" acc_prob="0.925">
            <gDNA_intron_boundary i_start="62545" i_stop="62306" i_length="240"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="62305" e_stop="61964" e_length="342"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65990" stop="65879"/>
              <exon start="65783" stop="65478"/>
              <exon start="65321" stop="65272"/>
              <exon start="65151" stop="64649"/>
              <exon start="63825" stop="63745"/>
              <exon start="62608" stop="62546"/>
              <exon start="62305" stop="61964"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U581972" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GACGTGTCATGGAGACCAGTAGACAAAATAAATGAGGAAAAAGAGGAGGGACAATTCTTATAGCGACCTTGCTCGCTGAGTTTTGGAGTATAGACATATGGAGTATAACCAG : ATTTAGCTGTGCATAAGTTTTGACCATCTCAAATGTCAAGGCCACAGGTCACCATCACTTTGGGACGCTCGGGTCAAGTAAGCTTTCTCCACTGTTTTTCGCTTTATGGATCTGTTTGGAGGTTTCTTAATTGTGGGTTCAATTTTTTCTTAATTTGTTACTGTTAAACTTGCAGAAAGTGGTTAAGCGATCATCAGCTTCTCAGGGTAATGGTTTTAGTCAACAGACATTGTCAAGAGGCAAAAGGTCATTAGGAGAGACCTATAGGACTGACTCTGAGGATCCTACAAAATCCCTTCGTAAACG : TGTGCGAGGGGATAAAGATGCAGGAGGTTCCAGATATGGCAGACAGAATG : GTGCACGCATTGGGAAAAATGACCTCCGACTGAAACTAATGCACAGAAGAAGGCAAAGGGAAATTCATCTGCAGATTGAAGAAAGAAAAAAGGAGCAGCATAAGAGGATGACAAGAAGTGTTCAATCTGCAGAACAATCTCACAAGAGGCTTGTCACCAGCAGCCAACCGTCGTCAGGAGCTAGCGAATTGCTTCAGATAGAGGCAATTAGATCCTCCTATACATCACAAACTGCTGCTGGTGTTAGATCAAGATCCCCTTATAGACTTGCAAACGATTCTAAAGAAGTCTCTTCTTCAAGGAATATCACTGCAGCTCAGCATGTACCGTCAGTAAGGCCAGCCGAAGCTTCAAGAATGGTTCATATGGCAGGATATGACCTCATCGACTCTTCTCAGCTAAAAGTCCTTACCCCTGTGACCATGAGGTCAGCACTGGGTGCCAGGAATCCATTGACAGGTCTTCCCTCTGCAAATGGAGGCATGCTACACAGACCATATCCT : GATCAACCTCCTTTGACCGTTGCCAGTCTATTAAATTCGCTCGGTTTGGGGAAATACACTATCCACTTTCAAGCCGAGGAG : GTAGACATGGCTGCACTGAAGCAAATGGGGGACCGTGACCTGAAGGAATTGGGGATACCAATG : GGACCCAGGAAGAAGATTCTCTTGGCTATGCTTTCCCAAACTTAGAAGACCTGTGTAGTATGGTAGTTATATTTATTCAATTCAATGCTCCTGTTTCTAAGCTGAAGTTATCAAGCTGGCTGTTCTTGGGAAATGTATATAAAGGGTAGCGGTATAATGCTGGAGTATTTGGCTGATATTTGTTGTATAATAGACAGTATATAACAGTGAAATTATCTCTTTCGTTTTTGGGAGAGGCTGATCTTTTTGTGAATTTATTTTAGAGAACTGTTCAACATGAGATGCGGTTTGAAGTTATTCATATAGAGAAGATTATATGATTCCGAATTGTTATGTCATTCT</gDNA_template>
            <first_frame> D  V  S  W  R  P  V  D  K  I  N  E  E  K  E  E  G  Q  F  L  *  R  P  C  S  L  S  F  G  V  *  T  Y  G  V  *  P   : D  L  A  V  H  K  F  *  P  S  Q  M  S  R  P  Q  V  T  I  T  L  G  R  S  G  Q  V  S  F  L  H  C  F  S  L  Y  G  S  V  W  R  F  L  N  C  G  F  N  F  F  L  I  C  Y  C  *  T  C  R  K  W  L  S  D  H  Q  L  L  R  V  M  V  L  V  N  R  H  C  Q  E  A  K  G  H  *  E  R  P  I  G  L  T  L  R  I  L  Q  N  P  F  V  N   : V  C  E  G  I  K  M  Q  E  V  P  D  M  A  D  R  M  :  V  H  A  L  G  K  M  T  S  D  *  N  *  C  T  E  E  G  K  G  K  F  I  C  R  L  K  K  E  K  R  S  S  I  R  G  *  Q  E  V  F  N  L  Q  N  N  L  T  R  G  L  S  P  A  A  N  R  R  Q  E  L  A  N  C  F  R  *  R  Q  L  D  P  P  I  H  H  K  L  L  L  V  L  D  Q  D  P  L  I  D  L  Q  T  I  L  K  K  S  L  L  Q  G  I  S  L  Q  L  S  M  Y  R  Q  *  G  Q  P  K  L  Q  E  W  F  I  W  Q  D  M  T  S  S  T  L  L  S  *  K  S  L  P  L  *  P  *  G  Q  H  W  V  P  G  I  H  *  Q  V  F  P  L  Q  M  E  A  C  Y  T  D  H  I  L :   I  N  L  L  *  P  L  P  V  Y  *  I  R  S  V  W  G  N  T  L  S  T  F  K  P  R  R :   *  T  W  L  H  *  S  K  W  G  T  V  T  *  R  N  W  G  Y  Q  W :   D  P  G  R  R  F  S  W  L  C  F  P  K  L  R  R  P  V  *  Y  G  S  Y  I  Y  S  I  Q  C  S  C  F  *  A  E  V  I  K  L  A  V  L  G  K  C  I  *  R  V  A  V  *  C  W  S  I  W  L  I  F  V  V  *  *  T  V  Y  N  S  E  I  I  S  F  V  F  G  R  G  *  S  F  C  E  F  I  L  E  N  C  S  T  *  D  A  V  *  S  Y  S  Y  R  E  D  Y  M  I  P  N  C  Y  V  I   </first_frame>
            <second_frame>  T  C  H  G  D  Q  *  T  K  *  M  R  K  K  R  R  D  N  S  Y  S  D  L  A  R  *  V  L  E  Y  R  H  M  E  Y  N  Q  :  I  *  L  C  I  S  F  D  H  L  K  C  Q  G  H  R  S  P  S  L  W  D  A  R  V  K  *  A  F  S  T  V  F  R  F  M  D  L  F  G  G  F  L  I  V  G  S  I  F  S  *  F  V  T  V  K  L  A  E  S  G  *  A  I  I  S  F  S  G  *  W  F  *  S  T  D  I  V  K  R  Q  K  V  I  R  R  D  L  *  D  *  L  *  G  S  Y  K  I  P  S  *  T  :  C  A  R  G  *  R  C  R  R  F  Q  I  W  Q  T  E  W :   C  T  H  W  E  K  *  P  P  T  E  T  N  A  Q  K  K  A  K  G  N  S  S  A  D  *  R  K  K  K  G  A  A  *  E  D  D  K  K  C  S  I  C  R  T  I  S  Q  E  A  C  H  Q  Q  P  T  V  V  R  S  *  R  I  A  S  D  R  G  N  *  I  L  L  Y  I  T  N  C  C  W  C  *  I  K  I  P  L  *  T  C  K  R  F  *  R  S  L  F  F  K  E  Y  H  C  S  S  A  C  T  V  S  K  A  S  R  S  F  K  N  G  S  Y  G  R  I  *  P  H  R  L  F  S  A  K  S  P  Y  P  C  D  H  E  V  S  T  G  C  Q  E  S  I  D  R  S  S  L  C  K  W  R  H  A  T  Q  T  I  S   : *  S  T  S  F  D  R  C  Q  S  I  K  F  A  R  F  G  E  I  H  Y  P  L  S  S  R  G   : G  R  H  G  C  T  E  A  N  G  G  P  *  P  E  G  I  G  D  T  N   : G  T  Q  E  E  D  S  L  G  Y  A  F  P  N  L  E  D  L  C  S  M  V  V  I  F  I  Q  F  N  A  P  V  S  K  L  K  L  S  S  W  L  F  L  G  N  V  Y  K  G  *  R  Y  N  A  G  V  F  G  *  Y  L  L  Y  N  R  Q  Y  I  T  V  K  L  S  L  S  F  L  G  E  A  D  L  F  V  N  L  F  *  R  T  V  Q  H  E  M  R  F  E  V  I  H  I  E  K  I  I  *  F  R  I  V  M  S  F  </second_frame>
            <third_frame>   R  V  M  E  T  S  R  Q  N  K  *  G  K  R  G  G  T  I  L  I  A  T  L  L  A  E  F  W  S  I  D  I  W  S  I  T  R :   F  S  C  A  *  V  L  T  I  S  N  V  K  A  T  G  H  H  H  F  G  T  L  G  S  S  K  L  S  P  L  F  F  A  L  W  I  C  L  E  V  S  *  L  W  V  Q  F  F  L  N  L  L  L  L  N  L  Q  K  V  V  K  R  S  S  A  S  Q  G  N  G  F  S  Q  Q  T  L  S  R  G  K  R  S  L  G  E  T  Y  R  T  D  S  E  D  P  T  K  S  L  R  K  R :   V  R  G  D  K  D  A  G  G  S  R  Y  G  R  Q  N   : G  A  R  I  G  K  N  D  L  R  L  K  L  M  H  R  R  R  Q  R  E  I  H  L  Q  I  E  E  R  K  K  E  Q  H  K  R  M  T  R  S  V  Q  S  A  E  Q  S  H  K  R  L  V  T  S  S  Q  P  S  S  G  A  S  E  L  L  Q  I  E  A  I  R  S  S  Y  T  S  Q  T  A  A  G  V  R  S  R  S  P  Y  R  L  A  N  D  S  K  E  V  S  S  S  R  N  I  T  A  A  Q  H  V  P  S  V  R  P  A  E  A  S  R  M  V  H  M  A  G  Y  D  L  I  D  S  S  Q  L  K  V  L  T  P  V  T  M  R  S  A  L  G  A  R  N  P  L  T  G  L  P  S  A  N  G  G  M  L  H  R  P  Y  P  :  D  Q  P  P  L  T  V  A  S  L  L  N  S  L  G  L  G  K  Y  T  I  H  F  Q  A  E  E  :  V  D  M  A  A  L  K  Q  M  G  D  R  D  L  K  E  L  G  I  P  M  :  G  P  R  K  K  I  L  L  A  M  L  S  Q  T  *  K  T  C  V  V  W  *  L  Y  L  F  N  S  M  L  L  F  L  S  *  S  Y  Q  A  G  C  S  W  E  M  Y  I  K  G  S  G  I  M  L  E  Y  L  A  D  I  C  C  I  I  D  S  I  *  Q  *  N  Y  L  F  R  F  W  E  R  L  I  F  L  *  I  Y  F  R  E  L  F  N  M  R  C  G  L  K  L  F  I  *  R  R  L  Y  D  S  E  L  L  C  H  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0014P22.2" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="65653" stop="65478"/>
                    <exon start="65321" stop="65272"/>
                    <exon start="65151" stop="64649"/>
                    <exon start="63825" stop="63745"/>
                    <exon start="62608" stop="62546"/>
                    <exon start="62305" stop="62261"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>915</number_coding_nucleotides>
                  <number_encoded_amino_acids>305</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LWVQFFLNLLLLNLQKVVKRSSASQGNGFSQQTLSRGKRSLGETYRTDSEDPTKSLRKRVRGDKDAGGSRYGRQNGARIGKNDLRLKLMHRRRQREIHLQIEERKKEQHKRMTRSVQSAEQSHKRLVTSSQPSSGASELLQIEAIRSSYTSQTAAGVRSRSPYRLANDSKEVSSSRNITAAQHVPSVRPAEASRMVHMAGYDLIDSSQLKVLTPVTMRSALGARNPLTGLPSANGGMLHRPYPDQPPLTVASLLNSLGLGKYTIHFQAEEVDMAALKQMGDRDLKELGIPMGPRKKILLAMLSQT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="65897" e_stop="65879"/>
            <exon e_start="65783" e_stop="65707"/>
            <exon e_start="65608" e_stop="65272"/>
            <exon e_start="65151" e_stop="64782"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.946" e_score="0.947"/>
          <exon-intron don_prob="0.991" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.974" e_score="1.000"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.947">
            <gDNA_exon_boundary e_start="65897" e_stop="65879" e_length="19"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.946">
            <gDNA_intron_boundary i_start="65878" i_stop="65784" i_length="95"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="65783" e_stop="65707" e_length="77"/>
          </exon>
          <intron i_serial="2" don_prob="0.991" acc_prob="0.996">
            <gDNA_intron_boundary i_start="65706" i_stop="65609" i_length="98"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="65608" e_stop="65272" e_length="337"/>
          </exon>
          <intron i_serial="3" don_prob="0.997" acc_prob="0.974">
            <gDNA_intron_boundary i_start="65271" i_stop="65152" i_length="120"/>
          </intron>
          <exon e_serial="4" e_score="0.997">
            <gDNA_exon_boundary e_start="65151" e_stop="64782" e_length="370"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65897" stop="65879"/>
              <exon start="65783" stop="65707"/>
              <exon start="65608" stop="65272"/>
              <exon start="65151" stop="64782"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U581973" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACATATGGAGTATAACCAG : ATTTAGCTGTGCATAAGTTTTGACCATCTCAAATGTCAAGGCCACAGGTCACCATCACTTTGGGACGCTCGGGTCAA : AAAGTGGTTAAGCGATCATCAGCTTCTCAGGGTAATGGTTTTAGTCAACAGACATTGTCAAGAGGCAAAAGGTCATTAGGAGAGACCTATAGGACTGACTCTGAGGATCCTACAAAATCCCTTCGTAAACGGTAAAATCTTTTGTTTGTTGTTCTGGTTGAGCTAATGTAGGTTGTATCTAATTTATTGTTTTCAGAATAATGGAAGGAATATAAAAAAACTATCAAAGTTAGAGTGGTAGTTTTGATTTTATTTGATAGTGGAAGTTTTGCTATTGTTTTTGCAAGTGTGCGAGGGGATAAAGATGCAGGAGGTTCCAGATATGGCAGACAGAATG : GTGCACGCATTGGGAAAAATGACCTCCGACTGAAACTAATGCACAGAAGAAGGCAAAGGGAAATTCATCTGCAGATTGAAGAAAGAAAAAAGGAGCAGCATAAGAGGATGACAAGAAGTGTTCAATCTGCAGAACAATCTCACAAGAGGCTTGTCACCAGCAGCCAACCGTCGTCAGGAGCTAGCGAATTGCTTCAGATAGAGGCAATTAGATCCTCCTATACATCACAAACTGCTGCTGGTGTTAGATCAAGATCCCCTTATAGACTTGCAAACGATTCTAAAGAAGTCTCTTCTTCAAGGAATATCACTGCAGCTCAGCATGTACCGTCAGTAAGGCCAGCCGAAGCTTCAAGAATGGTTCATATGGC</gDNA_template>
            <first_frame> T  Y  G  V  *  P   : D  L  A  V  H  K  F  *  P  S  Q  M  S  R  P  Q  V  T  I  T  L  G  R  S  G  Q  :  K  V  V  K  R  S  S  A  S  Q  G  N  G  F  S  Q  Q  T  L  S  R  G  K  R  S  L  G  E  T  Y  R  T  D  S  E  D  P  T  K  S  L  R  K  R  *  N  L  L  F  V  V  L  V  E  L  M  *  V  V  S  N  L  L  F  S  E  *  W  K  E  Y  K  K  T  I  K  V  R  V  V  V  L  I  L  F  D  S  G  S  F  A  I  V  F  A  S  V  R  G  D  K  D  A  G  G  S  R  Y  G  R  Q  N   : G  A  R  I  G  K  N  D  L  R  L  K  L  M  H  R  R  R  Q  R  E  I  H  L  Q  I  E  E  R  K  K  E  Q  H  K  R  M  T  R  S  V  Q  S  A  E  Q  S  H  K  R  L  V  T  S  S  Q  P  S  S  G  A  S  E  L  L  Q  I  E  A  I  R  S  S  Y  T  S  Q  T  A  A  G  V  R  S  R  S  P  Y  R  L  A  N  D  S  K  E  V  S  S  S  R  N  I  T  A  A  Q  H  V  P  S  V  R  P  A  E  A  S  R  M  V  H  M   </first_frame>
            <second_frame>  H  M  E  Y  N  Q  :  I  *  L  C  I  S  F  D  H  L  K  C  Q  G  H  R  S  P  S  L  W  D  A  R  V  K :   K  W  L  S  D  H  Q  L  L  R  V  M  V  L  V  N  R  H  C  Q  E  A  K  G  H  *  E  R  P  I  G  L  T  L  R  I  L  Q  N  P  F  V  N  G  K  I  F  C  L  L  F  W  L  S  *  C  R  L  Y  L  I  Y  C  F  Q  N  N  G  R  N  I  K  K  L  S  K  L  E  W  *  F  *  F  Y  L  I  V  E  V  L  L  L  F  L  Q  V  C  E  G  I  K  M  Q  E  V  P  D  M  A  D  R  M  :  V  H  A  L  G  K  M  T  S  D  *  N  *  C  T  E  E  G  K  G  K  F  I  C  R  L  K  K  E  K  R  S  S  I  R  G  *  Q  E  V  F  N  L  Q  N  N  L  T  R  G  L  S  P  A  A  N  R  R  Q  E  L  A  N  C  F  R  *  R  Q  L  D  P  P  I  H  H  K  L  L  L  V  L  D  Q  D  P  L  I  D  L  Q  T  I  L  K  K  S  L  L  Q  G  I  S  L  Q  L  S  M  Y  R  Q  *  G  Q  P  K  L  Q  E  W  F  I  W  </second_frame>
            <third_frame>   I  W  S  I  T  R :   F  S  C  A  *  V  L  T  I  S  N  V  K  A  T  G  H  H  H  F  G  T  L  G  S   : K  S  G  *  A  I  I  S  F  S  G  *  W  F  *  S  T  D  I  V  K  R  Q  K  V  I  R  R  D  L  *  D  *  L  *  G  S  Y  K  I  P  S  *  T  V  K  S  F  V  C  C  S  G  *  A  N  V  G  C  I  *  F  I  V  F  R  I  M  E  G  I  *  K  N  Y  Q  S  *  S  G  S  F  D  F  I  *  *  W  K  F  C  Y  C  F  C  K  C  A  R  G  *  R  C  R  R  F  Q  I  W  Q  T  E  W :   C  T  H  W  E  K  *  P  P  T  E  T  N  A  Q  K  K  A  K  G  N  S  S  A  D  *  R  K  K  K  G  A  A  *  E  D  D  K  K  C  S  I  C  R  T  I  S  Q  E  A  C  H  Q  Q  P  T  V  V  R  S  *  R  I  A  S  D  R  G  N  *  I  L  L  Y  I  T  N  C  C  W  C  *  I  K  I  P  L  *  T  C  K  R  F  *  R  S  L  F  F  K  E  Y  H  C  S  S  A  C  T  V  S  K  A  S  R  S  F  K  N  G  S  Y  G </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0014P22.2" strand="-"/>
                <serials PGL_serial="14" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="65407" stop="65272"/>
                    <exon start="65151" stop="64784"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>504</number_coding_nucleotides>
                  <number_encoded_amino_acids>168</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>WKEYKKTIKVRVVVLILFDSGSFAIVFASVRGDKDAGGSRYGRQNGARIGKNDLRLKLMHRRRQREIHLQIEERKKEQHKRMTRSVQSAEQSHKRLVTSSQPSSGASELLQIEAIRSSYTSQTAAGVRSRSPYRLANDSKEVSSSRNITAAQHVPSVRPAEASRMVHM</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="-" PGL_start="73252" PGL_stop="67820"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="73252" e_stop="72930"/>
            <exon e_start="72359" e_stop="72247"/>
            <exon e_start="69387" e_stop="69338"/>
            <exon e_start="69207" e_stop="69136"/>
            <exon e_start="68486" e_stop="68426"/>
            <exon e_start="68215" e_stop="67820"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.993" acc_prob="0.959" e_score="0.994"/>
          <exon-intron don_prob="0.999" acc_prob="0.718" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.854" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.960" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="73252" e_stop="72930" e_length="323"/>
          </exon>
          <intron i_serial="1" don_prob="0.993" acc_prob="0.959">
            <gDNA_intron_boundary i_start="72929" i_stop="72360" i_length="570"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="72359" e_stop="72247" e_length="113"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.718">
            <gDNA_intron_boundary i_start="72246" i_stop="69388" i_length="2859"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="69387" e_stop="69338" e_length="50"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="69337" i_stop="69208" i_length="130"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="69207" e_stop="69136" e_length="72"/>
          </exon>
          <intron i_serial="4" don_prob="0.995" acc_prob="0.854">
            <gDNA_intron_boundary i_start="69135" i_stop="68487" i_length="649"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="68486" e_stop="68426" e_length="61"/>
          </exon>
          <intron i_serial="5" don_prob="0.998" acc_prob="0.960">
            <gDNA_intron_boundary i_start="68425" i_stop="68216" i_length="210"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="68215" e_stop="67820" e_length="396"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73252" stop="72930"/>
              <exon start="72359" stop="72247"/>
              <exon start="69387" stop="69338"/>
              <exon start="69207" stop="69136"/>
              <exon start="68486" stop="68426"/>
              <exon start="68215" stop="67820"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U577574" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACCCGTTTATTAATTTATTTTAATTATAATTTTTCTTCAGATATTAGGTGAAAAGAAAAGGAGAGAACGGATAGTAATATATAAATATCAACGCTGTACGAAAGAGATTTTTTCCTTTCCGAAGTTGTGGTGGTTAACAGAATCACATTTTTGACTCAATCGGAAAGTCGGAGCAGAAAACGAGACAACGAAGCAACAACTACCGGAATCCGCCATGAGAACTCTTCAAGCTTCCACCTCCTACAGCGTTGGCTTTGGAATTTCATCTTTTGCTACTCGTCCTAAGCCTTCTTCTACTCATCGCTGCCTCACCGTAGCCAAAA : TGGAGCCATCAGAGAAATCTGTTGAAATCATGAGGAAATTCTCGGAGCAGTATGCTCGCAGGTCAGAAACATATTTCTGCATGGACAAAGGTGTTACTTCTGTGGTCATCAAG : GGTTTGGCAGAGCACAAGGATACATTGGGTGCTCCACTCTGCCCCTGCAG : GCATTATGATGACAAAGCTGCAGAAGCGCAGCAGGGCTTCTGGAATTGTCCGTGTGTACCAATGAGAGAGAG : GAAGGAGTGTCACTGCATGCTTTTTCTGACCCCTGATAATGATTTTGCTGGAGAAGAACAG : ACGATTACTATGGAGGAGATTAAGGAAACAACAGCCAACATGTGATGCTCGGACATCTTATACATGCTATGAACATTACGTTTTTGTTGTACATGTATATTTGAGTATTAGATGAAGAGCAACAATCCAGTTCTGATGTGACATGTTGCTGAAACCCCATCCATTACATTGTTGTGATTCTGATCTCGTCTAGTGAGATTGGGTGGGTGAATAACAGTGCAATTATGCTAACTGTTGTGTGATGCATCTAGATTGTATGAGTCATAACTCATATTAGGGGATTTTGGGTGGCTTCAGCTTCAGCTAATGCAAATCCTGATTTTGTATAAAACTGGAATCAATTTCCAAAAGCTGCTTTGTGAAGTTCAATCCCAGTCGTCTGACGTGTTAATAATG</gDNA_template>
            <first_frame> T  R  L  L  I  Y  F  N  Y  N  F  S  S  D  I  R  *  K  E  K  E  R  T  D  S  N  I  *  I  S  T  L  Y  E  R  D  F  F  L  S  E  V  V  V  V  N  R  I  T  F  L  T  Q  S  E  S  R  S  R  K  R  D  N  E  A  T  T  T  G  I  R  H  E  N  S  S  S  F  H  L  L  Q  R  W  L  W  N  F  I  F  C  Y  S  S  *  A  F  F  Y  S  S  L  P  H  R  S  Q  N :   G  A  I  R  E  I  C  *  N  H  E  E  I  L  G  A  V  C  S  Q  V  R  N  I  F  L  H  G  Q  R  C  Y  F  C  G  H  Q   : G  F  G  R  A  Q  G  Y  I  G  C  S  T  L  P  L  Q  :  A  L  *  *  Q  S  C  R  S  A  A  G  L  L  E  L  S  V  C  T  N  E  R  E  :  E  G  V  S  L  H  A  F  S  D  P  *  *  *  F  C  W  R  R  T   : D  D  Y  Y  G  G  D  *  G  N  N  S  Q  H  V  M  L  G  H  L  I  H  A  M  N  I  T  F  L  L  Y  M  Y  I  *  V  L  D  E  E  Q  Q  S  S  S  D  V  T  C  C  *  N  P  I  H  Y  I  V  V  I  L  I  S  S  S  E  I  G  W  V  N  N  S  A  I  M  L  T  V  V  *  C  I  *  I  V  *  V  I  T  H  I  R  G  F  W  V  A  S  A  S  A  N  A  N  P  D  F  V  *  N  W  N  Q  F  P  K  A  A  L  *  S  S  I  P  V  V  *  R  V  N  N  </first_frame>
            <second_frame>  P  V  Y  *  F  I  L  I  I  I  F  L  Q  I  L  G  E  K  K  R  R  E  R  I  V  I  Y  K  Y  Q  R  C  T  K  E  I  F  S  F  P  K  L  W  W  L  T  E  S  H  F  *  L  N  R  K  V  G  A  E  N  E  T  T  K  Q  Q  L  P  E  S  A  M  R  T  L  Q  A  S  T  S  Y  S  V  G  F  G  I  S  S  F  A  T  R  P  K  P  S  S  T  H  R  C  L  T  V  A  K   : M  E  P  S  E  K  S  V  E  I  M  R  K  F  S  E  Q  Y  A  R  R  S  E  T  Y  F  C  M  D  K  G  V  T  S  V  V  I  K  :  G  L  A  E  H  K  D  T  L  G  A  P  L  C  P  C  R :   H  Y  D  D  K  A  A  E  A  Q  Q  G  F  W  N  C  P  C  V  P  M  R  E  R :   K  E  C  H  C  M  L  F  L  T  P  D  N  D  F  A  G  E  E  Q  :  T  I  T  M  E  E  I  K  E  T  T  A  N  M  *  C  S  D  I  L  Y  M  L  *  T  L  R  F  C  C  T  C  I  F  E  Y  *  M  K  S  N  N  P  V  L  M  *  H  V  A  E  T  P  S  I  T  L  L  *  F  *  S  R  L  V  R  L  G  G  *  I  T  V  Q  L  C  *  L  L  C  D  A  S  R  L  Y  E  S  *  L  I  L  G  D  F  G  W  L  Q  L  Q  L  M  Q  I  L  I  L  Y  K  T  G  I  N  F  Q  K  L  L  C  E  V  Q  S  Q  S  S  D  V  L  I  M </second_frame>
            <third_frame>   P  F  I  N  L  F  *  L  *  F  F  F  R  Y  *  V  K  R  K  G  E  N  G  *  *  Y  I  N  I  N  A  V  R  K  R  F  F  P  F  R  S  C  G  G  *  Q  N  H  I  F  D  S  I  G  K  S  E  Q  K  T  R  Q  R  S  N  N  Y  R  N  P  P  *  E  L  F  K  L  P  P  P  T  A  L  A  L  E  F  H  L  L  L  L  V  L  S  L  L  L  L  I  A  A  S  P  *  P  K  :  W  S  H  Q  R  N  L  L  K  S  *  G  N  S  R  S  S  M  L  A  G  Q  K  H  I  S  A  W  T  K  V  L  L  L  W  S  S  R :   V  W  Q  S  T  R  I  H  W  V  L  H  S  A  P  A   : G  I  M  M  T  K  L  Q  K  R  S  R  A  S  G  I  V  R  V  Y  Q  *  E  R   : G  R  S  V  T  A  C  F  F  *  P  L  I  M  I  L  L  E  K  N  R :   R  L  L  W  R  R  L  R  K  Q  Q  P  T  C  D  A  R  T  S  Y  T  C  Y  E  H  Y  V  F  V  V  H  V  Y  L  S  I  R  *  R  A  T  I  Q  F  *  C  D  M  L  L  K  P  H  P  L  H  C  C  D  S  D  L  V  *  *  D  W  V  G  E  *  Q  C  N  Y  A  N  C  C  V  M  H  L  D  C  M  S  H  N  S  Y  *  G  I  L  G  G  F  S  F  S  *  C  K  S  *  F  C  I  K  L  E  S  I  S  K  S  C  F  V  K  F  N  P  S  R  L  T  C  *  *   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0014P22.2" strand="-"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="73098" stop="72930"/>
                    <exon start="72359" stop="72247"/>
                    <exon start="69387" stop="69338"/>
                    <exon start="69207" stop="69136"/>
                    <exon start="68486" stop="68426"/>
                    <exon start="68215" stop="68171"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>507</number_coding_nucleotides>
                  <number_encoded_amino_acids>169</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LNRKVGAENETTKQQLPESAMRTLQASTSYSVGFGISSFATRPKPSSTHRCLTVAKMEPSEKSVEIMRKFSEQYARRSETYFCMDKGVTSVVIKGLAEHKDTLGAPLCPCRHYDDKAAEAQQGFWNCPCVPMRERKECHCMLFLTPDNDFAGEEQTITMEEIKETTANM*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="71792" e_stop="71049"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.991"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.991">
            <gDNA_exon_boundary e_start="71792" e_stop="71049" e_length="744"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71792" stop="71049"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U570840" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTATACAAATGTTTTGAACGTTAGGATACTCCCTCCTAGGCTATAAAGTGAGAATTTATCGTATCTGCTTGGAAACTGTATTGTCGTTTTACTAACTCCAAGATAATGGCATTCTGTATACTTGAAGTTTAGGACAAGCTGCAAGTGTGTGATGTCATTTCAGTTCCAAAAAGTTGCTTCTATACTATAGCTGCTTGATTATTGTTGAATAGTATTTTGTTGCTCAGAAGTTCTACTTTGGTCTTATTACCTCATAAAAAAAAAAGTGATACCTTTGGTTTAGAGCTTGAATAGCCAATCACTTTTTCCCAGGTATCCTTCACTTTATATTTCAGGTTTAGGTGTGTGTTCGTGTATCTTCTAGAAGCATATTTCTATGTAAGTTCGTGAAAGTATGAATTTAAAATTGTGGAGCTGTGGAAACTCTTGAACTGAGGGGATATCAATTATCAAAGACTTATAATGAGAGATAAACAATAGCACAAAGCTAATTATATAATAAAGGACAGTTATACAAGGAATTTTTAACACAAAGAAGGGAATAAGAATTGAGAAACTTTTAATAATGTGAGTACAAGATTTACCATCTCATAAACAAGATAGAAGAATAGATTTTATCATCTCATAAACAAGATAGAAGAATAGATTTATCTCAAGTTTCAGAGAATGTGACTGTGACGGAGTTAATAGATTGCTAAATACAAGCCAATCACAAAGATCAATCCAACATGCTGTCCTTCTTTT</gDNA_template>
            <first_frame> L  Y  K  C  F  E  R  *  D  T  P  S  *  A  I  K  *  E  F  I  V  S  A  W  K  L  Y  C  R  F  T  N  S  K  I  M  A  F  C  I  L  E  V  *  D  K  L  Q  V  C  D  V  I  S  V  P  K  S  C  F  Y  T  I  A  A  *  L  L  L  N  S  I  L  L  L  R  S  S  T  L  V  L  L  P  H  K  K  K  S  D  T  F  G  L  E  L  E  *  P  I  T  F  S  Q  V  S  F  T  L  Y  F  R  F  R  C  V  F  V  Y  L  L  E  A  Y  F  Y  V  S  S  *  K  Y  E  F  K  I  V  E  L  W  K  L  L  N  *  G  D  I  N  Y  Q  R  L  I  M  R  D  K  Q  *  H  K  A  N  Y  I  I  K  D  S  Y  T  R  N  F  *  H  K  E  G  N  K  N  *  E  T  F  N  N  V  S  T  R  F  T  I  S  *  T  R  *  K  N  R  F  Y  H  L  I  N  K  I  E  E  *  I  Y  L  K  F  Q  R  M  *  L  *  R  S  *  *  I  A  K  Y  K  P  I  T  K  I  N  P  T  C  C  P  S  F </first_frame>
            <second_frame>  Y  T  N  V  L  N  V  R  I  L  P  P  R  L  *  S  E  N  L  S  Y  L  L  G  N  C  I  V  V  L  L  T  P  R  *  W  H  S  V  Y  L  K  F  R  T  S  C  K  C  V  M  S  F  Q  F  Q  K  V  A  S  I  L  *  L  L  D  Y  C  *  I  V  F  C  C  S  E  V  L  L  W  S  Y  Y  L  I  K  K  K  V  I  P  L  V  *  S  L  N  S  Q  S  L  F  P  R  Y  P  S  L  Y  I  S  G  L  G  V  C  S  C  I  F  *  K  H  I  S  M  *  V  R  E  S  M  N  L  K  L  W  S  C  G  N  S  *  T  E  G  I  S  I  I  K  D  L  *  *  E  I  N  N  S  T  K  L  I  I  *  *  R  T  V  I  Q  G  I  F  N  T  K  K  G  I  R  I  E  K  L  L  I  M  *  V  Q  D  L  P  S  H  K  Q  D  R  R  I  D  F  I  I  S  *  T  R  *  K  N  R  F  I  S  S  F  R  E  C  D  C  D  G  V  N  R  L  L  N  T  S  Q  S  Q  R  S  I  Q  H  A  V  L  L   </second_frame>
            <third_frame>   I  Q  M  F  *  T  L  G  Y  S  L  L  G  Y  K  V  R  I  Y  R  I  C  L  E  T  V  L  S  F  Y  *  L  Q  D  N  G  I  L  Y  T  *  S  L  G  Q  A  A  S  V  *  C  H  F  S  S  K  K  L  L  L  Y  Y  S  C  L  I  I  V  E  *  Y  F  V  A  Q  K  F  Y  F  G  L  I  T  S  *  K  K  K  *  Y  L  W  F  R  A  *  I  A  N  H  F  F  P  G  I  L  H  F  I  F  Q  V  *  V  C  V  R  V  S  S  R  S  I  F  L  C  K  F  V  K  V  *  I  *  N  C  G  A  V  E  T  L  E  L  R  G  Y  Q  L  S  K  T  Y  N  E  R  *  T  I  A  Q  S  *  L  Y  N  K  G  Q  L  Y  K  E  F  L  T  Q  R  R  E  *  E  L  R  N  F  *  *  C  E  Y  K  I  Y  H  L  I  N  K  I  E  E  *  I  L  S  S  H  K  Q  D  R  R  I  D  L  S  Q  V  S  E  N  V  T  V  T  E  L  I  D  C  *  I  Q  A  N  H  K  D  Q  S  N  M  L  S  F  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLm0014P22.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 43 chains have been computed
$ 
$ memory statistics:
$ 71032 bytes spliced alignments in total
$ 33 spliced alignments have been stored
$ 2152 bytes was the average size of a spliced alignment
$ 25176 bytes predicted gene locations in total
$ 15 predicted gene locations have been stored
$ 1678 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 44 backtrace matrices have been allocated
$ 
$ date finished: 2009-12-01 11:15:03
-->
