<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-12-01 10:57:11"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U592501" ref_strand="+" ref_description="SGN-U592501 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|41052959|dbj|BAD07869.1| (e_value=3e-19) hypothetical; ">
      <seq>ggggcgaccccaggtcaggcgggattacccgctgagtttaagcatatcaataagcggaggaaaagaaacttacaaggattcccctagtaacggcgagcgaaccgggaacagcccagccttagaatcgggcggctccgtcgtccgaattgtcgtctggagaagcgtcctcagcggcggaccgggcccaagtcccctggaagggggcgccgganagggtgagagccccgtcgtgcccggaccctgtcgcaccacgaggcgctgtctacgagtcnggnnngtttgggnaatgcagcccanatcggggcggngaattccgtcnanggctaaatactgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0089P21.1" temp_strand="+" temp_description="C02SLe0089P21.1  AC215459.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0089P21 sequenced_by:kribb upload_account_name:korea">
        <position start="524" stop="1394"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="821" g_stop="1151" g_length="331"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="334" r_length="334" r_score="0.946"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0089P21.1" gen_strand="+" ref_id="SGN-U592501" ref_strand="+">
        <total_alignment_score>0.946</total_alignment_score>
        <cumulative_length_of_scored_exons>331</cumulative_length_of_scored_exons>
        <coverage percentage="0.991" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0089P21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U592501" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="821" e_stop="1151"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCGCGACCCCAGGTCAGGCGGGATTACCCGCTGAGTTTAAGCATATCAATAAGCGGAGGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAACAGCCCAGCCTTAGAATCGGGCGGCTCCGTCGTCCGAATTGTAGTCTGGAGAAGCGTCCTCAGCGGCGGACCGGGCCCAAGTCCCCTGGAAGGGGGCGCCGGAGAGGGTGAGAGCCCCGTCGTGCCCGGACCCTGTCGCACCACGAGGCGCTGTCTACGAGTC-GGGTTGTTTGGG-AATGCAGCCCAAATC-GGGCGGTGAATTCCGTCCAAGGCTAAATACTGG</genome_strand>
        <mrna_strand>GGGGCGACCCCAGGTCAGGCGGGATTACCCGCTGAGTTTAAGCATATCAATAAGCGGAGGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAACAGCCCAGCCTTAGAATCGGGCGGCTCCGTCGTCCGAATTGTCGTCTGGAGAAGCGTCCTCAGCGGCGGACCGGGCCCAAGTCCCCTGGAAGGGGGCGCCGGANAGGGTGAGAGCCCCGTCGTGCCCGGACCCTGTCGCACCACGAGGCGCTGTCTACGAGTCNGGNNNGTTTGGGNAATGCAGCCCANATCGGGGCGGNGAATTCCGTCNANGGCTAAATACTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U590360" ref_strand="-" ref_description="SGN-U590360 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>ctcgaagttacggatccattttgccgacttcccttgcctacattgttccatcgaccagaggctgttcaccttggagacctagcacccggttcgctcgccnttactaggggaacccttgtaagtttcttttcntnctgcttattgatatgcttaaantcagcgggta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0089P21.1" temp_strand="-" temp_description="C02SLe0089P21.1  AC215459.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0089P21 sequenced_by:kribb upload_account_name:korea">
        <position start="3058" stop="546"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2758" g_stop="2673" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="84" r_length="84" r_score="0.953"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="2672" i_stop="927" i_length="1746">
            <donor d_prob="0.000" d_score="0.94"/>
            <acceptor a_prob="0.000" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="926" g_stop="846" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="85" r_stop="166" r_length="82" r_score="0.914"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0089P21.1" gen_strand="-" ref_id="SGN-U590360" ref_strand="-">
        <total_alignment_score>0.934</total_alignment_score>
        <cumulative_length_of_scored_exons>167</cumulative_length_of_scored_exons>
        <coverage percentage="1.006" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0089P21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U590360" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="2758" e_stop="2673"/>
          <exon e_start="926" e_stop="846"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCGAAGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATCGACCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGGACGGCATTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGAGCGCACCGGACACCACGCGACGTGCGGTGCTCTTCCAGCCGCTGGACCCTACCTCCGGCTGAGCCGATTCCAGGGTGGGCAGGCTGTTAAACAGAAAAGATAACTCTTCCCGAGGCTCCCGCCGACGTCTCCGGACTTCCTAACGTTGCCGTCAACCGCCACGTCCCGGTTCAGGAATTTTAACCCGATTCCCTTTCGGAGTACGCGCGAAACGCGCTATCTGTCGGGGTTCCCCCGACCCTTAGGATCGACTAACCCATGTGCAAGTGCCGTTCACATGGAACCTTTCCCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTACCACCAAGATCTGCACCGACGGCCGCTCCGCCCAGGCTCGCGCCCAAGGTTTTGCAGCGACCGCCGCGCCCTCCTACTCATCGGGGCCTGGCACTTGCCCCGACGGCCGGGTGTAGGTCGCGCGCTTAAGCGCCATCCATTTTCGGGGCTAGTTGATTCGGCAGGTGAGTTGTTACACACTCCTTAGCGGATTTCGACTTCCATGACCACCGTCCTGCTGTCTTAATCGACCAACACCCTTTGTGGGATCTAGGTTAGCGCGCAGTTTGGCACCGTAACCCGGCTTCCGGTTCATCCCGCATCGCCAGTTCTGCTTACCAAAAATGGCCCACTTGGAGCTCTTGATTCCGTGGCGCGGCTCAACAAAGCAGCCGCGCCGTCCTACCTATTTAAAGTTTGAGAATAGGTCGAGGGCGTTGCGCCCCCGAGGCCTCTAATCATTGGCTTTACCCGATAGAACTCGCACGCGAGCTCCAGCTATCCTGAGGGAAACTTCGGAGGGAACCAGCTACTAGACGGTTCGATTAGTCTTTCGCCCCTATACCCAAGTCAGACGAACGATTTGCACGTCAGTATCGCTGCGGGCCTCCACCAGAGTTTCCTCTGGCTTCGCCCCGCTCAGGCATAGTTCACCATCTTTCGGGTCCCGACAGGTATGCTCACACTCGAACCCTTCTCAGAAGATCAAGGTCGGTCGGCGGTGCACCCCTCAGGGGGATCCCACCAATCAGCTTCCTTACGCCTTACGGGTTTACTCGCCCGTTGACTCGCACACATGTCAGACTCCTTGGTCCGTGTTTCAAGACGGGTCGAATGGGGAGCCCACAGGCCAGCGTCCGGAGCGCGCAGATGCCGAAGCACGCCGGAGGCGCGCGCTGCCTTCCACAATCGGGGAGACGGCGTTCCACGGGCGTATCGAGAGCCCGGGCTTTGGCCGCCCCCCCAATCCACGCTGGTCCACGCCCCGAGTCGATCGGCGGACCGGCTCGTCGCCGTTCCACATCCGACCGGGGCGCATCGCCGGCCCCCATCCGCTTCCCTCCCGACAATTTCAAGCACTCTTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCTCGCCAGTATTTAGCCTTGGACGGAATTCACCGCCCGATTTGGGCTGCATTCCCAAACAACCCGACTCGTAGACAGCGCCTCGTGGTGCGACAGGGTCCGGGCACGACGGGGCTCTCACCCTCTCCGGCGCCCCCTTCCAGGGGACTTGGGCCCGGTCCGCCGCTGAGGACGCTTCTCCAGACTACAATTCGGACGACGGAGCCGCCCGATTCTAAGGCTGGGCTGTTCCCGGTTCGCTCGCCGTTACTAGGGGAATCCTTGTAAGTTTCTTTTCCTCC-GCTTATTGATATGCTTAAACTCAGCGGGTA</genome_strand>
        <mrna_strand>CTCGAAGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATCGACCAGAGGCTGTTCACCTTGGAGACCT-A-GCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCGGTTCGCTCGCCNTTACTAGGGGAACCCTTGTAAGTTTCTTTTCNTNCTGCTTATTGATATGCTTAAANTCAGCGGGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U591296" ref_strand="-" ref_description="SGN-U591296 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>ctcgaagttacggatccattttgccgacttcccttgcctacattgttccatcgaccagaggctgttcaccttggagacctagcacccggttcgctcgccgttactaggggaacccttgtaagtttcttttcntnncngcttattgatatgcttaaactcagcgggta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0089P21.1" temp_strand="-" temp_description="C02SLe0089P21.1  AC215459.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0089P21 sequenced_by:kribb upload_account_name:korea">
        <position start="3058" stop="546"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2758" g_stop="2673" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="84" r_length="84" r_score="0.953"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="2672" i_stop="927" i_length="1746">
            <donor d_prob="0.000" d_score="0.94"/>
            <acceptor a_prob="0.000" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="926" g_stop="846" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="85" r_stop="167" r_length="83" r_score="0.914"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0089P21.1" gen_strand="-" ref_id="SGN-U591296" ref_strand="-">
        <total_alignment_score>0.934</total_alignment_score>
        <cumulative_length_of_scored_exons>167</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0089P21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U591296" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="2758" e_stop="2673"/>
          <exon e_start="926" e_stop="846"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCGAAGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATCGACCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGGACGGCATTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGAGCGCACCGGACACCACGCGACGTGCGGTGCTCTTCCAGCCGCTGGACCCTACCTCCGGCTGAGCCGATTCCAGGGTGGGCAGGCTGTTAAACAGAAAAGATAACTCTTCCCGAGGCTCCCGCCGACGTCTCCGGACTTCCTAACGTTGCCGTCAACCGCCACGTCCCGGTTCAGGAATTTTAACCCGATTCCCTTTCGGAGTACGCGCGAAACGCGCTATCTGTCGGGGTTCCCCCGACCCTTAGGATCGACTAACCCATGTGCAAGTGCCGTTCACATGGAACCTTTCCCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTACCACCAAGATCTGCACCGACGGCCGCTCCGCCCAGGCTCGCGCCCAAGGTTTTGCAGCGACCGCCGCGCCCTCCTACTCATCGGGGCCTGGCACTTGCCCCGACGGCCGGGTGTAGGTCGCGCGCTTAAGCGCCATCCATTTTCGGGGCTAGTTGATTCGGCAGGTGAGTTGTTACACACTCCTTAGCGGATTTCGACTTCCATGACCACCGTCCTGCTGTCTTAATCGACCAACACCCTTTGTGGGATCTAGGTTAGCGCGCAGTTTGGCACCGTAACCCGGCTTCCGGTTCATCCCGCATCGCCAGTTCTGCTTACCAAAAATGGCCCACTTGGAGCTCTTGATTCCGTGGCGCGGCTCAACAAAGCAGCCGCGCCGTCCTACCTATTTAAAGTTTGAGAATAGGTCGAGGGCGTTGCGCCCCCGAGGCCTCTAATCATTGGCTTTACCCGATAGAACTCGCACGCGAGCTCCAGCTATCCTGAGGGAAACTTCGGAGGGAACCAGCTACTAGACGGTTCGATTAGTCTTTCGCCCCTATACCCAAGTCAGACGAACGATTTGCACGTCAGTATCGCTGCGGGCCTCCACCAGAGTTTCCTCTGGCTTCGCCCCGCTCAGGCATAGTTCACCATCTTTCGGGTCCCGACAGGTATGCTCACACTCGAACCCTTCTCAGAAGATCAAGGTCGGTCGGCGGTGCACCCCTCAGGGGGATCCCACCAATCAGCTTCCTTACGCCTTACGGGTTTACTCGCCCGTTGACTCGCACACATGTCAGACTCCTTGGTCCGTGTTTCAAGACGGGTCGAATGGGGAGCCCACAGGCCAGCGTCCGGAGCGCGCAGATGCCGAAGCACGCCGGAGGCGCGCGCTGCCTTCCACAATCGGGGAGACGGCGTTCCACGGGCGTATCGAGAGCCCGGGCTTTGGCCGCCCCCCCAATCCACGCTGGTCCACGCCCCGAGTCGATCGGCGGACCGGCTCGTCGCCGTTCCACATCCGACCGGGGCGCATCGCCGGCCCCCATCCGCTTCCCTCCCGACAATTTCAAGCACTCTTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCTCGCCAGTATTTAGCCTTGGACGGAATTCACCGCCCGATTTGGGCTGCATTCCCAAACAACCCGACTCGTAGACAGCGCCTCGTGGTGCGACAGGGTCCGGGCACGACGGGGCTCTCACCCTCTCCGGCGCCCCCTTCCAGGGGACTTGGGCCCGGTCCGCCGCTGAGGACGCTTCTCCAGACTACAATTCGGACGACGGAGCCGCCCGATTCTAAGGCTGGGCTGTTCCCGGTTCGCTCGCCGTTACTAGGGGAATCCTTGTAAGTTTCTTTTCCT--CCGCTTATTGATATGCTTAAACTCAGCGGGTA</genome_strand>
        <mrna_strand>CTCGAAGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATCGACCAGAGGCTGTTCACCTTGGAGACCT-A-GCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCGGTTCGCTCGCCGTTACTAGGGGAACCCTTGTAAGTTTCTTTTCNTNNCNGCTTATTGATATGCTTAAACTCAGCGGGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U581066" ref_strand="+" ref_description="SGN-U581066 Tomato 200607#2 [266 ESTs aligned] (*GB) gi|1545805|dbj|BAA10929.1| (e_value=3e-98) cytochrome P450 like_TBP [Nicotiana tabacum]; (*SWP) sp|Q8TGM7|ART2_YEAST (e_value=6e-15) Uncharacterized protein ART2 OS=Saccharomyces cerevisiae GN=ART2; ">
      <seq>gaggagtctgacatgtgtgcgagtcaacgggcgagtaaacccgtaaggcgtaaggaagctgattggtgggatccccctgaggggtgcaccgccgaccgaccttgatcttctgagaagggttcgagtgtgagcatacctgtcgggacccgaaagatggtgaactatgcctgagcggggcgaagccagaggaaactctggtggaggcccgcagcgatactgacgtgcaaatcgttcgtctgacttgggtataggggcgaaagactaatcgaaccgtctagtagctggttccctccgaagtttccctcaggatagctggagctcgcgtgcgagttctatcgggtaaagccaatgattagaggcctcgggggcgcaacgccctcgacctattctcaaactttaaataggtaggacggcgcggctgctttgttgagccgcgccacggaatcaagagctccaagtgggccatttttggtaagcagaactggcgatgcgggatgaaccggaagccgggttacggtgccaaactgcgcgctaacctagatcccacaaagggtgttggtcgattaagacagcaggacggtggtcatggaagtcgaaatccgctaaggagtgtgtaacaactcacctgccgaatcaactagccccgaaaatggatggcgcttaagcgcgcgacctacacccggccgtcggggcaagtgccaggccccgatgagtaggagggcgcggcggtcgctgcaaaaccttgggcgcgagcctgggcggagcggccgtcggtgcagatcttggtggtagtagcaaatattcaaatgagaactttgaaggccgaagaggggaaaggttccatgtgaacggcacttgcacatgggttagtcgatcctaagggtcgggggaaccccgacagatagcgcgtttcgcgcgtactccgaaagggaatcgggttaaaattcctgaaccgggacgtggcggttgacggcaacgttaggaagtccggagacgtcggcgggagcctcgggaagagttatcttttctgtttaacagcctgcccaccctggaatcggctcagccggaggtagggtccagcggctggaagagcaccgcacgtcgcgtggtgtccggtgcgctcccggcggcccttgaaaatccggaggaccgaatgccgtccacgcccggtcgtactcataaccgcatcaggtctccaaggtgaacagcctctggtcgatggaacaatgtaggcaagggaagtcggcaaaatggatccgtaacttcgggaaaaggattggctctgagggctgggcacgggggtcccagtcccgaacccgtcggctgtcggtggactgctcgagctgctcccgcggcgagagcgggtcgccgcgtgccggccgggggacggactgggaacggttccttcgggggccttccccgggcgtcgaacagccaactcagaactggtacggacaaggggaatccgactgtttaattaaaacaaagcattgcgatggtcccaacggatgtttacgcaatgtgatttctgcccagtgctctgaatgtcaaagtgaagaaattcaaccaagcgcgggtaaacggcgggagtaactatgactctcttaaggtagccaaatgcctcgtcatctaattagtgacgcgcatgaatggattaacgagattcccactgtccctgtctactatccagcgaaaccacagccaagggaacgggcttggcagaatcagcggggaaagaagaccctgttgagcttgactctagtccgactttgtgaaatgacttgagaggtgtagtataagtgggagccgaaaggcgaaagtgaaataccactacttttaacgttattttacttattccgtgaatcggaagcggggcactgcccctctttttggacccaaggctcgcttcgcgggccgatccgggcggaagacattgtcaggtggggagtttggctggggcggcacatctgttaaaagataacgcaggtgtcctaagatgagctcaacgagaacagaaatctcgtgtggaacagaagggtaaaagctcgtttgattctgatttccagtacgaatacgaaccgtgaaagcgtggcctaacgatcctttagaccttcggaattcgaagctagaggtgtcagaaaagttaccacagggataactggcttgtggcagccaagcgttcatagcgacgttgctttttgatccttcgatgtcggctcttcctatcattgtgaagcagaattcaccaagtgttggattgttcacccaccaatagggaacgtgagctgggtttagaccgtcgtgagacaggttagttttaccctactgatgacagtgtcgcaatagtaattcaacctagtacgagaggaaccgttgattcacacaattggccatcgcgcttggttgaaaagccagtggcgcgaagctaccgtgtgctggattatgactgaacgcctctaagtcagaatccgggctagaagcgacgcatgcgcccgccgtccgcttgccgacccgcagtaggggcctttggcccccaagggcacgtgtcgttggctaagtcgccgcgacggaagcgtcgcggtgaccgccttgaagtacaatttccatcgagcggcgggtagaatcctttgcagacgacttaaatacgcgacggggtattgtaagtggcagagtggccttgctgccacgatccactgagattcagccctttgtcgctccgattcgtcccttcatcatataaggccccaactataaataaatttaatatgtatgaaattgtatgaattatgattgtaatatgatgggaccttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0089P21.1" temp_strand="+" temp_description="C02SLe0089P21.1  AC215459.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0089P21 sequenced_by:kribb upload_account_name:korea">
        <position start="1191" stop="4524"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1490" g_stop="4217" g_length="2728"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="2728" r_length="2728" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0089P21.1" gen_strand="+" ref_id="SGN-U581066" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>2728</cumulative_length_of_scored_exons>
        <coverage percentage="0.970" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0089P21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U581066" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1490" e_stop="4217"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGGAGTCTGACATGTGTGCGAGTCAACGGGCGAGTAAACCCGTAAGGCGTAAGGAAGCTGATTGGTGGGATCCCCCTGAGGGGTGCACCGCCGACCGACCTTGATCTTCTGAGAAGGGTTCGAGTGTGAGCATACCTGTCGGGACCCGAAAGATGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATACTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGAAAGACTAATCGAACCGTCTAGTAGCTGGTTCCCTCCGAAGTTTCCCTCAGGATAGCTGGAGCTCGCGTGCGAGTTCTATCGGGTAAAGCCAATGATTAGAGGCCTCGGGGGCGCAACGCCCTCGACCTATTCTCAAACTTTAAATAGGTAGGACGGCGCGGCTGCTTTGTTGAGCCGCGCCACGGAATCAAGAGCTCCAAGTGGGCCATTTTTGGTAAGCAGAACTGGCGATGCGGGATGAACCGGAAGCCGGGTTACGGTGCCAAACTGCGCGCTAACCTAGATCCCACAAAGGGTGTTGGTCGATTAAGACAGCAGGACGGTGGTCATGGAAGTCGAAATCCGCTAAGGAGTGTGTAACAACTCACCTGCCGAATCAACTAGCCCCGAAAATGGATGGCGCTTAAGCGCGCGACCTACACCCGGCCGTCGGGGCAAGTGCCAGGCCCCGATGAGTAGGAGGGCGCGGCGGTCGCTGCAAAACCTTGGGCGCGAGCCTGGGCGGAGCGGCCGTCGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGGTTAGTCGATCCTAAGGGTCGGGGGAACCCCGACAGATAGCGCGTTTCGCGCGTACTCCGAAAGGGAATCGGGTTAAAATTCCTGAACCGGGACGTGGCGGTTGACGGCAACGTTAGGAAGTCCGGAGACGTCGGCGGGAGCCTCGGGAAGAGTTATCTTTTCTGTTTAACAGCCTGCCCACCCTGGAATCGGCTCAGCCGGAGGTAGGGTCCAGCGGCTGGAAGAGCACCGCACGTCGCGTGGTGTCCGGTGCGCTCCCGGCGGCCCTTGAAAATCCGGAGGACCGAATGCCGTCCACGCCCGGTCGTACTCATAACCGCATCAGGTCTCCAAGGTGAACAGCCTCTGGTCGATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACTTCGGGAAAAGGATTGGCTCTGAGGGCTGGGCACGGGGGTCCCAGTCCCGAACCCGTCGGCTGTCGGTGGACTGCTCGAGCTGCTCCCGCGGCGAGAGCGGGTCGCCGCGTGCCGGCCGGGGGACGGACTGGGAACGGTTCCTTCGGGGGCCTTCCCCGGGCGTCGAACAGCCAACTCAGAACTGGTACGGACAAGGGGAATCCGACTGTTTAATTAAAACAAAGCATTGCGATGGTCCCAACGGATGTTTACGCAATGTGATTTCTGCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAACCAAGCGCGGGTAAACGGCGGGAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCGTCATCTAATTAGTGACGCGCATGAATGGATTAACGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCAGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGTATAAGTGGGAGCCGAAAGGCGAAAGTGAAATACCACTACTTTTAACGTTATTTTACTTATTCCGTGAATCGGAAGCGGGGCACTGCCCCTCTTTTTGGACCCAAGGCTCGCTTCGCGGGCCGATCCGGGCGGAAGACATTGTCAGGTGGGGAGTTTGGCTGGGGCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAACAGAAATCTCGTGTGGAACAGAAGGGTAAAAGCTCGTTTGATTCTGATTTCCAGTACGAATACGAACCGTGAAAGCGTGGCCTAACGATCCTTTAGACCTTCGGAATTCGAAGCTAGAGGTGTCAGAAAAGTTACCACAGGGATAACTGGCTTGTGGCAGCCAAGCGTTCATAGCGACGTTGCTTTTTGATCCTTCGATGTCGGCTCTTCCTATCATTGTGAAGCAGAATTCACCAAGTGTTGGATTGTTCACCCACCAATAGGGAACGTGAGCTGGGTTTAGACCGTCGTGAGACAGGTTAGTTTTACCCTACTGATGACAGTGTCGCAATAGTAATTCAACCTAGTACGAGAGGAACCGTTGATTCACACAATTGGCCATCGCGCTTGGTTGAAAAGCCAGTGGCGCGAAGCTACCGTGTGCTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTAGAAGCGACGCATGCGCCCGCCGTCCGCTTGCCGACCCGCAGTAGGGGCCTTTGGCCCCCAAGGGCACGTGTCGTTGGCTAAGTCGCCGCGACGGAAGCGTCGCGGTGACCGCCTTGAAGTACAATTTCCATCGAGCGGCGGGTAGAATCCTTTGCAGACGACTTAAATACGCGACGGGGTATTGTAAGTGGCAGAGTGGCCTTGCTGCCACGATCCACTGAGATTCAGCCCTTTGTCGCTCCGATTCGTCCC</genome_strand>
        <mrna_strand>GAGGAGTCTGACATGTGTGCGAGTCAACGGGCGAGTAAACCCGTAAGGCGTAAGGAAGCTGATTGGTGGGATCCCCCTGAGGGGTGCACCGCCGACCGACCTTGATCTTCTGAGAAGGGTTCGAGTGTGAGCATACCTGTCGGGACCCGAAAGATGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATACTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGAAAGACTAATCGAACCGTCTAGTAGCTGGTTCCCTCCGAAGTTTCCCTCAGGATAGCTGGAGCTCGCGTGCGAGTTCTATCGGGTAAAGCCAATGATTAGAGGCCTCGGGGGCGCAACGCCCTCGACCTATTCTCAAACTTTAAATAGGTAGGACGGCGCGGCTGCTTTGTTGAGCCGCGCCACGGAATCAAGAGCTCCAAGTGGGCCATTTTTGGTAAGCAGAACTGGCGATGCGGGATGAACCGGAAGCCGGGTTACGGTGCCAAACTGCGCGCTAACCTAGATCCCACAAAGGGTGTTGGTCGATTAAGACAGCAGGACGGTGGTCATGGAAGTCGAAATCCGCTAAGGAGTGTGTAACAACTCACCTGCCGAATCAACTAGCCCCGAAAATGGATGGCGCTTAAGCGCGCGACCTACACCCGGCCGTCGGGGCAAGTGCCAGGCCCCGATGAGTAGGAGGGCGCGGCGGTCGCTGCAAAACCTTGGGCGCGAGCCTGGGCGGAGCGGCCGTCGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGGTTAGTCGATCCTAAGGGTCGGGGGAACCCCGACAGATAGCGCGTTTCGCGCGTACTCCGAAAGGGAATCGGGTTAAAATTCCTGAACCGGGACGTGGCGGTTGACGGCAACGTTAGGAAGTCCGGAGACGTCGGCGGGAGCCTCGGGAAGAGTTATCTTTTCTGTTTAACAGCCTGCCCACCCTGGAATCGGCTCAGCCGGAGGTAGGGTCCAGCGGCTGGAAGAGCACCGCACGTCGCGTGGTGTCCGGTGCGCTCCCGGCGGCCCTTGAAAATCCGGAGGACCGAATGCCGTCCACGCCCGGTCGTACTCATAACCGCATCAGGTCTCCAAGGTGAACAGCCTCTGGTCGATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACTTCGGGAAAAGGATTGGCTCTGAGGGCTGGGCACGGGGGTCCCAGTCCCGAACCCGTCGGCTGTCGGTGGACTGCTCGAGCTGCTCCCGCGGCGAGAGCGGGTCGCCGCGTGCCGGCCGGGGGACGGACTGGGAACGGTTCCTTCGGGGGCCTTCCCCGGGCGTCGAACAGCCAACTCAGAACTGGTACGGACAAGGGGAATCCGACTGTTTAATTAAAACAAAGCATTGCGATGGTCCCAACGGATGTTTACGCAATGTGATTTCTGCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAACCAAGCGCGGGTAAACGGCGGGAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCGTCATCTAATTAGTGACGCGCATGAATGGATTAACGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCAGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGTATAAGTGGGAGCCGAAAGGCGAAAGTGAAATACCACTACTTTTAACGTTATTTTACTTATTCCGTGAATCGGAAGCGGGGCACTGCCCCTCTTTTTGGACCCAAGGCTCGCTTCGCGGGCCGATCCGGGCGGAAGACATTGTCAGGTGGGGAGTTTGGCTGGGGCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAACAGAAATCTCGTGTGGAACAGAAGGGTAAAAGCTCGTTTGATTCTGATTTCCAGTACGAATACGAACCGTGAAAGCGTGGCCTAACGATCCTTTAGACCTTCGGAATTCGAAGCTAGAGGTGTCAGAAAAGTTACCACAGGGATAACTGGCTTGTGGCAGCCAAGCGTTCATAGCGACGTTGCTTTTTGATCCTTCGATGTCGGCTCTTCCTATCATTGTGAAGCAGAATTCACCAAGTGTTGGATTGTTCACCCACCAATAGGGAACGTGAGCTGGGTTTAGACCGTCGTGAGACAGGTTAGTTTTACCCTACTGATGACAGTGTCGCAATAGTAATTCAACCTAGTACGAGAGGAACCGTTGATTCACACAATTGGCCATCGCGCTTGGTTGAAAAGCCAGTGGCGCGAAGCTACCGTGTGCTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTAGAAGCGACGCATGCGCCCGCCGTCCGCTTGCCGACCCGCAGTAGGGGCCTTTGGCCCCCAAGGGCACGTGTCGTTGGCTAAGTCGCCGCGACGGAAGCGTCGCGGTGACCGCCTTGAAGTACAATTTCCATCGAGCGGCGGGTAGAATCCTTTGCAGACGACTTAAATACGCGACGGGGTATTGTAAGTGGCAGAGTGGCCTTGCTGCCACGATCCACTGAGATTCAGCCCTTTGTCGCTCCGATTCGTCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U592384" ref_strand="+" ref_description="SGN-U592384 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|195611670|gb|ACG27665.1| (e_value=2e-14) hypothetical; ">
      <seq>gacgatctggcgatgcgggatgaaccggaagccgggttacggtgccaaactgcgcgctaacctatatcccacaaagggtgttggtcgattaagacagcaggacggtggtcatggaagtcgaaatccgctaaggagtgtgtaacaactcacctgccgaatcaactagccccgaaaatggatggcgcttaaacgcgcgacctacacccggccgtcggggcaagtgccaggccccgatgagtaggagggcgcggcggtcgctgcaaaaccttgggcgcgagcctgggcggagcggccgtcggtgcagatcttggtggtagtagcaaatattcaaatgagaactttgaaggccgaagaggggaaaggttccatgtgaacggcacttgcacatgggttagtcgatcctaagggtcgggggaaccccgacagatagcgcgtttcgcgcgtactccgaaagggaatcgggttaaaattcctgaaccgagacgtggcggttgacggcaacgttaggaagtccgcagcgatactgacgtgcaaatcgttcgtctgacttgggtataggggcgaaagactaatcgaaccgtctagtagctggatccctccgaagtttccctcatgataactggagctcgcgtgcgatttctatcgggtaaagccaatgattataggcctctggggcgcaacgccctcgacctattctcaaactttacataggtaggacggcgcggctgctttgttgagccgcgccacggaatcaagagct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0089P21.1" temp_strand="+" temp_description="C02SLe0089P21.1  AC215459.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0089P21 sequenced_by:kribb upload_account_name:korea">
        <position start="1668" stop="11300"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1965" g_stop="2474" g_length="510"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="510" r_length="510" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="2475" i_stop="10750" i_length="8276">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="10751" g_stop="11000" g_length="250"/>
          <reference_exon_boundary r_type="cDNA" r_start="511" r_stop="760" r_length="250" r_score="0.964"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0089P21.1" gen_strand="+" ref_id="SGN-U592384" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>760</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0089P21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U592384" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1965" e_stop="2474"/>
          <exon e_start="10751" e_stop="11000"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAGAACTGGCGATGCGGGATGAACCGGAAGCCGGGTTACGGTGCCAAACTGCGCGCTAACCTAGATCCCACAAAGGGTGTTGGTCGATTAAGACAGCAGGACGGTGGTCATGGAAGTCGAAATCCGCTAAGGAGTGTGTAACAACTCACCTGCCGAATCAACTAGCCCCGAAAATGGATGGCGCTTAAGCGCGCGACCTACACCCGGCCGTCGGGGCAAGTGCCAGGCCCCGATGAGTAGGAGGGCGCGGCGGTCGCTGCAAAACCTTGGGCGCGAGCCTGGGCGGAGCGGCCGTCGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGGTTAGTCGATCCTAAGGGTCGGGGGAACCCCGACAGATAGCGCGTTTCGCGCGTACTCCGAAAGGGAATCGGGTTAAAATTCCTGAACCGGGACGTGGCGGTTGACGGCAACGTTAGGAAGTCCGGAGACGTCGGCGGGAGCCTCGGGAAGAGTTATCTTTTCTGTTTAACAGCCTGCCCACCCTGGAATCGGCTCAGCCGGAGGTAGGGTCCAGCGGCTGGAAGAGCACCGCACGTCGCGTGGTGTCCGGTGCGCTCCCGGCGGCCCTTGAAAATCCGGAGGACCGAATGCCGTCCACGCCCGGTCGTACTCATAACCGCATCAGGTCTCCAAGGTGAACAGCCTCTGGTCGATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACTTCGGGAAAAGGATTGGCTCTGAGGGCTGGGCACGGGGGTCCCAGTCCCGAACCCGTCGGCTGTCGGTGGACTGCTCGAGCTGCTCCCGCGGCGAGAGCGGGTCGCCGCGTGCCGGCCGGGGGACGGACTGGGAACGGTTCCTTCGGGGGCCTTCCCCGGGCGTCGAACAGCCAACTCAGAACTGGTACGGACAAGGGGAATCCGACTGTTTAATTAAAACAAAGCATTGCGATGGTCCCAACGGATGTTTACGCAATGTGATTTCTGCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAACCAAGCGCGGGTAAACGGCGGGAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCGTCATCTAATTAGTGACGCGCATGAATGGATTAACGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCAGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGTATAAGTGGGAGCCGAAAGGCGAAAGTGAAATACCACTACTTTTAACGTTATTTTACTTATTCCGTGAATCGGAAGCGGGGCACTGCCCCTCTTTTTGGACCCAAGGCTCGCTTCGCGGGCCGATCCGGGCGGAAGACATTGTCAGGTGGGGAGTTTGGCTGGGGCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAACAGAAATCTCGTGTGGAACAGAAGGGTAAAAGCTCGTTTGATTCTGATTTCCAGTACGAATACGAACCGTGAAAGCGTGGCCTAACGATCCTTTAGACCTTCGGAATTCGAAGCTAGAGGTGTCAGAAAAGTTACCACAGGGATAACTGGCTTGTGGCAGCCAAGCGTTCATAGCGACGTTGCTTTTTGATCCTTCGATGTCGGCTCTTCCTATCATTGTGAAGCAGAATTCACCAAGTGTTGGATTGTTCACCCACCAATAGGGAACGTGAGCTGGGTTTAGACCGTCGTGAGACAGGTTAGTTTTACCCTACTGATGACAGTGTCGCAATAGTAATTCAACCTAGTACGAGAGGAACCGTTGATTCACACAATTGGCCATCGCGCTTGGTTGAAAAGCCAGTGGCGCGAAGCTACCGTGTGCTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTAGAAGCGACGCATGCGCCCGCCGTCCGCTTGCCGACCCGCAGTAGGGGCCTTTGGCCCCCAAGGGCACGTGTCGTTGGCTAAGTCGCCGCGACGGAAGCGTCGCGGTGACCGCCTTGAAGTACAATTTCCATCGAGCGGCGGGTAGAATCCTTTGCAGACGACTTAAATACGCGACGGGGTATTGTAAGTGGCAGAGTGGCCTTGCTGCCACGATCCACTGAGATTCAGCCCTTTGTCGCTCCGATTCGTCCCCCCCACACTCCCCCTCCCCCAAAATCAAATCCAATCATTTCTAACTTTTCAAATGTGAGGTTCGCGTGCTGCCTGCATCCTTCGAAGAGGAAAAAATAACTAAGTGTTGAAATATAAGTTTCAAAAGTAACACGGCAAGTGAAGTTCACTAGTCTGCCGCTAAGTGTTGAGCTATGCGTTCTGAGCCCCATTGCGAGTTTTTCGTGAAGTTGAGTTCATTTATCAAGCCTAATGACATGTTAAGGGACTAATGACATGTCACTGTAAGAGGTTTTCGGGATGTCGGGTGCGATTATTAAAGCCAAGTTAGATGTCAAGGGGCAAATGGGTCTGCGTACGCAGCACGTCCGCGGCCAGGCGGCATCTGCAAAGGCCTGCGCCGAACGGGCGTGGACTGCAAAATACGCCTTTGGGCAGCACACACGGTCGAACGACGTCGGGCGTGGCATGTCATCATCGCCTTTGGGCAGCACACACGTTCGAGCGACGTCGGGCGTGGCATGCCATCATCGCCTTTGGGCAGTACAAACGGTCGAACGACGTCGGGCGTGGCATGCCACCATCGCCTTTGGGCAGCACACACGGTCGAGCGACGTCGGGCGTGGCATGCCATCATCGCCTTTGGGCACACACGGTCGAACGGCGTCTGGCGTGGCATGCCATCTTCGCCTTTTTGCAGCACACACGGTCGAACGACGTCGGGCGTGGCATGCCATCTTCGCCCTTTGACAGCATAGACGGTCGGCCGTCGTCGGGCGTGGCATGCCATCTTCGCCCTTTGACAGCATAGACGGTCGGCCGTCGTCGGGCGTGGCATGCCATCATAGCCCTTGGACAGCACAAACGGTCGGCCGTCGTCGGACGTGCCTGCACACAACGGTCGGCCGTGGCCTGCCCGCATCGGTCGTGGCTTGCGCAACATTCATCGAGTTCCAAACAAAACATGCGGATGTTCATGGCGTACATAAATCAAAGGATTTTGAAACAACCTCCATGCATAACAAACATATTCATCTACTTTCCATTATCTATTCTCAAACGTTTCCGCCTAACGTGGCTCTTTCGCATCATTTTCGTTACTTTTACGGTTCGTACGATATTGAAACATCTTTTGTTTGTGCAAATATGCATCTTATCATTAATTTGACATGTTGAGAAGTGTTTTCGAGCATTTCCATATTTTTCCGACTTTTAATCATTATTTTATAATTTATTTTTACGCTTTTTTAATTTTTACGTCTCTTTTTAAAAATTAAAATTTATTAAATTTTATATTTTAAGGTTCACATATTTATTTGTGAATTTTCGGAGTTGATTTCATATTTTTTCGATATTTTCCCTATTTTTTATTAATTTATTACTAATTTTTTGGAATTTTTGAAAAAAATAAAAATCAAAAAAAATTGTTGAAAAATATTTTTTTATACATATTAAAGTCAATTATGAAGGCTGATGTGTGTTTGTACCTTAGACCGCGCATATTTGGGTTGTACATTTTCATTATGATTCTCTGGAAAATCCATGTCTACTCCTGTCACATGGGCAAAACTTTTTTAAGCATATATAAGGGGGGTAGAGGTGTTGGAGGCAGACTGAGGCGCAGGCAGGCAGACGGCATAGGCGTCCCGTGGGCTTAGCAGGCGTGCTGCGTGGGCGCTTGATGGCATGCATGGCTTGTCCGTGCTACGCCGTTGGGCGTTTACAAAAACACGTCGGCGACGTCGACGGGTCGAGTGGGCAACGGCAGGCGGACGCCGAGGGCGTCCTGTGGGCTTAGTAGGCGTGCTGCGTGGGCGCTTGATGGCATGCATGGCTCGTCCGTGCTACGTCGTTGGGCGTCTACAAAAACATGCTAGCGACGTTTGCGGGGCAACTGAAGCGAAGGCAGGCGGACGTCGAGGGCGTCCTGTGGGCTTAGTAGGCGTGCTGCGTGGGCGCTTGACGGCATGCATGGCTCGTCCGTGCTACGCCGTTGGGCGTTTACAAAAACACGCCCGCGACGTCTGTAGGGCGTTTGAGGCGGTGGCAGGCGGACGTCATGGGCGTCCTGTGGGCTTAGTAGGTGTGCTGCGTGGGCGCTTGACGGCATGCATGGCTCGTCCGTGCTACGCCGTTGGGCGTCAACAAAAACATGCCAGCGACGTCTGCGGGGCAACTGAGGCGAAAGCAGGCGGACGTCAAGGGCGTCCTGTGGGCTTAGTAGGCGTGCTGCGTGGGCGCTTGATGGCATGCATGGCTCGTCCGTGCTACGCCGTTGGGCGCTTGCAAAAACATGTCGACGACGTCTGCGGGGCGACCGAGGCGTTACAAGGCGGATGCCATGGGCGTCCTGTGGGCTTAGTAGGCGTGCTGCGTGGGAGCTTGATGGCATGCATGGCTCGTCCGTGCTACGCCGTTGGGCGCTTACAAAAACATGCCAGCGACGTCTGCGGGGCGAACGTGCGCCGCCGAGGGAACTTCTCAAGATCGGTTTTATTATTGCGTTTGGTGTGGAAACGGCAGTGCTTTCGGGCGAGTGGCGAGTTCTAGAGCTCCTGTTACGGCTAACTCTAGGCGTCGCACGCACGGGGCACGTAAGGCCATGTACGGCCAGACGCTATGATGGACCGGGCGTGGGCGGTTCCCCTGTGTGAACCTTGGTCTTCCTCCAACAATCTTTGCAGTGATTAAATTCTCAACTCCCTTGGGCGGCGCGCAACGGCGGGTGTAGCATTGGCCTTGCAAAGAAGGCATCGGCGTCGTCGCACGACATCTAATGTCGGGCGGCGGGGTGGATGTCGGGCGTGCATTTCCGGAGCTATTCACGTACGGCGCATGAGTGGTATTGGGCATGTGTGGTTAGGTTGGATCCCTGCTTCGAGCAGCGACGTCCTAACTCGCATGCCAACTCGGTGACGGATGAAGCGCAATCTAGGCTGGTCGGACGTCGGAACTTCCTGTGCTGCATACCTACTGCCTAGGCATTGTGCACGTGCAAACGGTCGCCTTTCGCCCCTCGCATCCCATGCGCGGGGTGAACCCAAAAGACGCTCTCGCGTCCCACGCCTTCCCTCGCTTCGTCGTGCGATGGCGTGGTCCGTGAGCGGCGCCTCGAATTCTCGGATACGGTAGACGCAGTGGGCATGGGGCCTTCACCGGCTTCTATCTGCCCAAAACGAATGCTCCTTGCGAATGACTGCCGCGCTCGCCTTGGACCCGACCGTGCCCGAAAGGGCGCGCCGGGCTCATGCGGCGCGCGGCGTCGTTGAGGAATGCTACCTGGTTGATCCTGCCAGTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACAAATTCAGACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTATCTACTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGAAGGGATGCATTTATTAGATAAAAGGTCGACGCGGGCTCTGCCCGTTGCTGCGATGATTCATGATAACTCGACGGATCGCACGGCCATCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGTGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCTCTATGAGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGACTTTGGGATGGGCCGGCCGGTCCGCCCTAGGTGTGCACCGGTCGTCTCGTCCCTTCTGTCGGCGATGCGCTCCTGGCCTTAATTGGCCGGGTCGTGCCTCCGGCGCTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCATGGGATAACATTATAGGATTTCGGTCCTATTACGTTGGCCTTCGGGATCGGAGTAATGATTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAGACGATCAGATACCGTCCTAGTCTCAACCATAAACGATGCCGACCAGGGATCGGCGGATGTTGCTTTTAGGACTCCGCCGGCACCTTATGAGAAATCAAAGTTTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGGAATTGACGGAAGGGCACCACCAGGAGTGGAGCCTGCGGCTTAATTTGACTCAACACGGGGAAACTTACCAGGTCCAGACATAGTAAGGATTGACAGACTGAGAGCTCTTTCTTGATTCTATGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTCAGCCTGCTAACTAGCTATGCGGAGGTATCCCTTCGCGGCCAGCTTCTTAGAGGGACTACGGCCTTTTAGGCCGCGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGCTTATAGCCTTGGCCGACAGGCCCGGGTAATCTTTGAAATTTCATCGTGATGGGGATAGATCATTGCAATTGTTGGTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTACGTCCCTGCCCTTTGTACACACCGCCCGTCGCTCCTACCGATTGAATGATCCGGTGAAATGTTCGGATCGCGGCGACGTGGGCGGTTCGCTGCCCGCGACGTCGCGAGAAGTCCATTGAACCTTATCATTTAGAGGAAGGAGAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTGTCGAAACCTGCACAGCAGAACGACCCGCGAACTCGTTTTAAACACCGGGGGCGGCGCTCGCTCGTCGCGCGCCTCCCCCCGTCGCCCGAGGCGCGCAAGCTCTTCGGGCGACCAACGAACCCCGGCGCGGAAAGCGCCAAGGAATACTACAATCGACAGCCCTCCCCCTCGCGCCCCGTTCGCGGATCGTGCGGGGGGAAGCGCGCTGCTCTGTTAACACAAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATTTGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTCGCCCCCTCGCACGCCGCAAGGCTTTAGCGCGGGGGCGGAAGCTGGCCTCCCGTGCGCCCCGAGCGCGCGGCCGGCCTAAATGCGAGTCCACGTCGACGGACGTCGCGGCAAGTGGTGGTTGAAACTCAACTCTCTCTTGTTGTCGCGGCTACAGCCCGTCGCGCGTCCGGACTCCCCGACCCTCACCGCGCCTCACCAGGCGCTCCGACCGCGACCCCAGGTCAGGCGGGATTACCCGCTGAGTTTAAGCATATCAATAAGCGGAGGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAACAGCCCAGCCTTAGAATCGGGCGGCTCCGTCGTCCGAATTGTAGTCTGGAGAAGCGTCCTCAGCGGCGGACCGGGCCCAAGTCCCCTGGAAGGGGGCGCCGGAGAGGGTGAGAGCCCCGTCGTGCCCGGACCCTGTCGCACCACGAGGCGCTGTCTACGAGTCGGGTTGTTTGGGAATGCAGCCCAAATCGGGCGGTGAATTCCGTCCAAGGCTAAATACTGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGGAAAGATGAAAAGGACTTTGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGGGAAGCGGATGGGGGCCGGCGATGCGCCCCGGTCGGATGTGGAACGGCGACGAGCCGGTCCGCCGATCGACTCGGGGCGTGGACCAGCGTGGATTGGGGGGGCGGCCAAAGCCCGGGCTCTCGATACGCCCGTGGAACGCCGTCTCCCCGATTGTGGAAGGCAGCGCGCGCCTCCGGCGTGCTTCGGCATCTGCGCGCTCCGGACGCTGGCCTGTGGGCTCCCCATTCGACCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGCGAGTAAACCCGTAAGGCGTAAGGAAGCTGATTGGTGGGATCCCCCTGAGGGGTGCACCGCCGACCGACCTTGATCTTCTGAGAAGGGTTCGAGTGTGAGCATACCTGTCGGGACCCGAAAGATGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATACTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGAAAGACTAATCGAACCGTCTAGTAGCTGGTTCCCTCCGAAGTTTCCCTCAGGATAGCTGGAGCTCGCGTGCGAGTTCTATCGGGTAAAGCCAATGATTAGAGGCCTCGGGCGCGCAACGCCCTCGACCTATTCTCAAACTTTAAATAGGTAGGACGGCGCGGCTGCTTTGTTGAGCCGCGCCACGGAATCAAGAGCT</genome_strand>
        <mrna_strand>GACGATCTGGCGATGCGGGATGAACCGGAAGCCGGGTTACGGTGCCAAACTGCGCGCTAACCTATATCCCACAAAGGGTGTTGGTCGATTAAGACAGCAGGACGGTGGTCATGGAAGTCGAAATCCGCTAAGGAGTGTGTAACAACTCACCTGCCGAATCAACTAGCCCCGAAAATGGATGGCGCTTAAACGCGCGACCTACACCCGGCCGTCGGGGCAAGTGCCAGGCCCCGATGAGTAGGAGGGCGCGGCGGTCGCTGCAAAACCTTGGGCGCGAGCCTGGGCGGAGCGGCCGTCGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGGTTAGTCGATCCTAAGGGTCGGGGGAACCCCGACAGATAGCGCGTTTCGCGCGTACTCCGAAAGGGAATCGGGTTAAAATTCCTGAACCGAGACGTGGCGGTTGACGGCAACGTTAGGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................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      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U590622" ref_strand="+" ref_description="SGN-U590622 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|1545805|dbj|BAA10929.1| (e_value=2e-40) cytochrome P450 like_TBP [Nicotiana tabacum]; ">
      <seq>gnnnnnnggnnttacggccgggnagcgcgggtaaacggcgggagtaactatgactctcttaaggnnnccaaatgcctcgtcatctaattagtgacgcgcatgaatggattaacgagattcccactgtccctgtctactatccagcgaaaccacagccaagggaacgggcttggcagaatcagcggggaaanaagaccctgttgagcttgactctagtccgactttgtgaaatgacttgagaggtgtagtataagtgggagccgaaaggcgaaagtgaaataccactacttttaacgttattttacttattccgtgaatcggaagcggggcactgcccctctttttggacccaaggcttgcttgcaggccgatccgggcgaaagactaatcgaaccgtctagtagctggttccctccgaagtttccctcaggatagctggagctcgcgtgcgagttctatcgggtaaagccaatgattagaggcatcgggggcgcaacgccctcgacctattctcaaactttaaataggtaggacggcgcggctgctttgttgagccgcgccacggaatcaagagctccaagtgggccatttttggtaagcagaactggcgatgcgggatgaaccggaagccgggttacggtgccaaactgcgcgctaacctanatcccacaaagggtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0089P21.1" temp_strand="+" temp_description="C02SLe0089P21.1  AC215459.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0089P21 sequenced_by:kribb upload_account_name:korea">
        <position start="2759" stop="11402"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3061" g_stop="3410" g_length="350"/>
          <reference_exon_boundary r_type="cDNA" r_start="26" r_stop="374" r_length="349" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="3411" i_stop="10798" i_length="7388">
            <donor d_prob="0.000" d_score="0.94"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="10799" g_stop="11102" g_length="304"/>
          <reference_exon_boundary r_type="cDNA" r_start="375" r_stop="678" r_length="304" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0089P21.1" gen_strand="+" ref_id="SGN-U590622" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>654</cumulative_length_of_scored_exons>
        <coverage percentage="0.965" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0089P21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U590622" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3061" e_stop="3410"/>
          <exon e_start="10799" e_stop="11102"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGCGGGTAAACGGCGGGAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCGTCATCTAATTAGTGACGCGCATGAATGGATTAACGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCAGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGTATAAGTGGGAGCCGAAAGGCGAAAGTGAAATACCACTACTTTTAACGTTATTTTACTTATTCCGTGAATCGGAAGCGGGGCACTGCCCCTCTTTTTGGACCCAAGGCTCGCTTCGCGGGCCGATCCGGGCGGAAGACATTGTCAGGTGGGGAGTTTGGCTGGGGCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAACAGAAATCTCGTGTGGAACAGAAGGGTAAAAGCTCGTTTGATTCTGATTTCCAGTACGAATACGAACCGTGAAAGCGTGGCCTAACGATCCTTTAGACCTTCGGAATTCGAAGCTAGAGGTGTCAGAAAAGTTACCACAGGGATAACTGGCTTGTGGCAGCCAAGCGTTCATAGCGACGTTGCTTTTTGATCCTTCGATGTCGGCTCTTCCTATCATTGTGAAGCAGAATTCACCAAGTGTTGGATTGTTCACCCACCAATAGGGAACGTGAGCTGGGTTTAGACCGTCGTGAGACAGGTTAGTTTTACCCTACTGATGACAGTGTCGCAATAGTAATTCAACCTAGTACGAGAGGAACCGTTGATTCACACAATTGGCCATCGCGCTTGGTTGAAAAGCCAGTGGCGCGAAGCTACCGTGTGCTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTAGAAGCGACGCATGCGCCCGCCGTCCGCTTGCCGACCCGCAGTAGGGGCCTTTGGCCCCCAAGGGCACGTGTCGTTGGCTAAGTCGCCGCGACGGAAGCGTCGCGGTGACCGCCTTGAAGTACAATTTCCATCGAGCGGCGGGTAGAATCCTTTGCAGACGACTTAAATACGCGACGGGGTATTGTAAGTGGCAGAGTGGCCTTGCTGCCACGATCCACTGAGATTCAGCCCTTTGTCGCTCCGATTCGTCCCCCCCACACTCCCCCTCCCCCAAAATCAAATCCAATCATTTCTAACTTTTCAAATGTGAGGTTCGCGTGCTGCCTGCATCCTTCGAAGAGGAAAAAATAACTAAGTGTTGAAATATAAGTTTCAAAAGTAACACGGCAAGTGAAGTTCACTAGTCTGCCGCTAAGTGTTGAGCTATGCGTTCTGAGCCCCATTGCGAGTTTTTCGTGAAGTTGAGTTCATTTATCAAGCCTAATGACATGTTAAGGGACTAATGACATGTCACTGTAAGAGGTTTTCGGGATGTCGGGTGCGATTATTAAAGCCAAGTTAGATGTCAAGGGGCAAATGGGTCTGCGTACGCAGCACGTCCGCGGCCAGGCGGCATCTGCAAAGGCCTGCGCCGAACGGGCGTGGACTGCAAAATACGCCTTTGGGCAGCACACACGGTCGAACGACGTCGGGCGTGGCATGTCATCATCGCCTTTGGGCAGCACACACGTTCGAGCGACGTCGGGCGTGGCATGCCATCATCGCCTTTGGGCAGTACAAACGGTCGAACGACGTCGGGCGTGGCATGCCACCATCGCCTTTGGGCAGCACACACGGTCGAGCGACGTCGGGCGTGGCATGCCATCATCGCCTTTGGGCACACACGGTCGAACGGCGTCTGGCGTGGCATGCCATCTTCGCCTTTTTGCAGCACACACGGTCGAACGACGTCGGGCGTGGCATGCCATCTTCGCCCTTTGACAGCATAGACGGTCGGCCGTCGTCGGGCGTGGCATGCCATCTTCGCCCTTTGACAGCATAGACGGTCGGCCGTCGTCGGGCGTGGCATGCCATCATAGCCCTTGGACAGCACAAACGGTCGGCCGTCGTCGGACGTGCCTGCACACAACGGTCGGCCGTGGCCTGCCCGCATCGGTCGTGGCTTGCGCAACATTCATCGAGTTCCAAACAAAACATGCGGATGTTCATGGCGTACATAAATCAAAGGATTTTGAAACAACCTCCATGCATAACAAACATATTCATCTACTTTCCATTATCTATTCTCAAACGTTTCCGCCTAACGTGGCTCTTTCGCATCATTTTCGTTACTTTTACGGTTCGTACGATATTGAAACATCTTTTGTTTGTGCAAATATGCATCTTATCATTAATTTGACATGTTGAGAAGTGTTTTCGAGCATTTCCATATTTTTCCGACTTTTAATCATTATTTTATAATTTATTTTTACGCTTTTTTAATTTTTACGTCTCTTTTTAAAAATTAAAATTTATTAAATTTTATATTTTAAGGTTCACATATTTATTTGTGAATTTTCGGAGTTGATTTCATATTTTTTCGATATTTTCCCTATTTTTTATTAATTTATTACTAATTTTTTGGAATTTTTGAAAAAAATAAAAATCAAAAAAAATTGTTGAAAAATATTTTTTTATACATATTAAAGTCAATTATGAAGGCTGATGTGTGTTTGTACCTTAGACCGCGCATATTTGGGTTGTACATTTTCATTATGATTCTCTGGAAAATCCATGTCTACTCCTGTCACATGGGCAAAACTTTTTTAAGCATATATAAGGGGGGTAGAGGTGTTGGAGGCAGACTGAGGCGCAGGCAGGCAGACGGCATAGGCGTCCCGTGGGCTTAGCAGGCGTGCTGCGTGGGCGCTTGATGGCATGCATGGCTTGTCCGTGCTACGCCGTTGGGCGTTTACAAAAACACGTCGGCGACGTCGACGGGTCGAGTGGGCAACGGCAGGCGGACGCCGAGGGCGTCCTGTGGGCTTAGTAGGCGTGCTGCGTGGGCGCTTGATGGCATGCATGGCTCGTCCGTGCTACGTCGTTGGGCGTCTACAAAAACATGCTAGCGACGTTTGCGGGGCAACTGAAGCGAAGGCAGGCGGACGTCGAGGGCGTCCTGTGGGCTTAGTAGGCGTGCTGCGTGGGCGCTTGACGGCATGCATGGCTCGTCCGTGCTACGCCGTTGGGCGTTTACAAAAACACGCCCGCGACGTCTGTAGGGCGTTTGAGGCGGTGGCAGGCGGACGTCATGGGCGTCCTGTGGGCTTAGTAGGTGTGCTGCGTGGGCGCTTGACGGCATGCATGGCTCGTCCGTGCTACGCCGTTGGGCGTCAACAAAAACATGCCAGCGACGTCTGCGGGGCAACTGAGGCGAAAGCAGGCGGACGTCAAGGGCGTCCTGTGGGCTTAGTAGGCGTGCTGCGTGGGCGCTTGATGGCATGCATGGCTCGTCCGTGCTACGCCGTTGGGCGCTTGCAAAAACATGTCGACGACGTCTGCGGGGCGACCGAGGCGTTACAAGGCGGATGCCATGGGCGTCCTGTGGGCTTAGTAGGCGTGCTGCGTGGGAGCTTGATGGCATGCATGGCTCGTCCGTGCTACGCCGTTGGGCGCTTACAAAAACATGCCAGCGACGTCTGCGGGGCGAACGTGCGCCGCCGAGGGAACTTCTCAAGATCGGTTTTATTATTGCGTTTGGTGTGGAAACGGCAGTGCTTTCGGGCGAGTGGCGAGTTCTAGAGCTCCTGTTACGGCTAACTCTAGGCGTCGCACGCACGGGGCACGTAAGGCCATGTACGGCCAGACGCTATGATGGACCGGGCGTGGGCGGTTCCCCTGTGTGAACCTTGGTCTTCCTCCAACAATCTTTGCAGTGATTAAATTCTCAACTCCCTTGGGCGGCGCGCAACGGCGGGTGTAGCATTGGCCTTGCAAAGAAGGCATCGGCGTCGTCGCACGACATCTAATGTCGGGCGGCGGGGTGGATGTCGGGCGTGCATTTCCGGAGCTATTCACGTACGGCGCATGAGTGGTATTGGGCATGTGTGGTTAGGTTGGATCCCTGCTTCGAGCAGCGACGTCCTAACTCGCATGCCAACTCGGTGACGGATGAAGCGCAATCTAGGCTGGTCGGACGTCGGAACTTCCTGTGCTGCATACCTACTGCCTAGGCATTGTGCACGTGCAAACGGTCGCCTTTCGCCCCTCGCATCCCATGCGCGGGGTGAACCCAAAAGACGCTCTCGCGTCCCACGCCTTCCCTCGCTTCGTCGTGCGATGGCGTGGTCCGTGAGCGGCGCCTCGAATTCTCGGATACGGTAGACGCAGTGGGCATGGGGCCTTCACCGGCTTCTATCTGCCCAAAACGAATGCTCCTTGCGAATGACTGCCGCGCTCGCCTTGGACCCGACCGTGCCCGAAAGGGCGCGCCGGGCTCATGCGGCGCGCGGCGTCGTTGAGGAATGCTACCTGGTTGATCCTGCCAGTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACAAATTCAGACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTATCTACTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGAAGGGATGCATTTATTAGATAAAAGGTCGACGCGGGCTCTGCCCGTTGCTGCGATGATTCATGATAACTCGACGGATCGCACGGCCATCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGTGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCTCTATGAGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGACTTTGGGATGGGCCGGCCGGTCCGCCCTAGGTGTGCACCGGTCGTCTCGTCCCTTCTGTCGGCGATGCGCTCCTGGCCTTAATTGGCCGGGTCGTGCCTCCGGCGCTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCATGGGATAACATTATAGGATTTCGGTCCTATTACGTTGGCCTTCGGGATCGGAGTAATGATTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAGACGATCAGATACCGTCCTAGTCTCAACCATAAACGATGCCGACCAGGGATCGGCGGATGTTGCTTTTAGGACTCCGCCGGCACCTTATGAGAAATCAAAGTTTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGGAATTGACGGAAGGGCACCACCAGGAGTGGAGCCTGCGGCTTAATTTGACTCAACACGGGGAAACTTACCAGGTCCAGACATAGTAAGGATTGACAGACTGAGAGCTCTTTCTTGATTCTATGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTCAGCCTGCTAACTAGCTATGCGGAGGTATCCCTTCGCGGCCAGCTTCTTAGAGGGACTACGGCCTTTTAGGCCGCGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGCTTATAGCCTTGGCCGACAGGCCCGGGTAATCTTTGAAATTTCATCGTGATGGGGATAGATCATTGCAATTGTTGGTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTACGTCCCTGCCCTTTGTACACACCGCCCGTCGCTCCTACCGATTGAATGATCCGGTGAAATGTTCGGATCGCGGCGACGTGGGCGGTTCGCTGCCCGCGACGTCGCGAGAAGTCCATTGAACCTTATCATTTAGAGGAAGGAGAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTGTCGAAACCTGCACAGCAGAACGACCCGCGAACTCGTTTTAAACACCGGGGGCGGCGCTCGCTCGTCGCGCGCCTCCCCCCGTCGCCCGAGGCGCGCAAGCTCTTCGGGCGACCAACGAACCCCGGCGCGGAAAGCGCCAAGGAATACTACAATCGACAGCCCTCCCCCTCGCGCCCCGTTCGCGGATCGTGCGGGGGGAAGCGCGCTGCTCTGTTAACACAAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATTTGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTCGCCCCCTCGCACGCCGCAAGGCTTTAGCGCGGGGGCGGAAGCTGGCCTCCCGTGCGCCCCGAGCGCGCGGCCGGCCTAAATGCGAGTCCACGTCGACGGACGTCGCGGCAAGTGGTGGTTGAAACTCAACTCTCTCTTGTTGTCGCGGCTACAGCCCGTCGCGCGTCCGGACTCCCCGACCCTCACCGCGCCTCACCAGGCGCTCCGACCGCGACCCCAGGTCAGGCGGGATTACCCGCTGAGTTTAAGCATATCAATAAGCGGAGGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAACAGCCCAGCCTTAGAATCGGGCGGCTCCGTCGTCCGAATTGTAGTCTGGAGAAGCGTCCTCAGCGGCGGACCGGGCCCAAGTCCCCTGGAAGGGGGCGCCGGAGAGGGTGAGAGCCCCGTCGTGCCCGGACCCTGTCGCACCACGAGGCGCTGTCTACGAGTCGGGTTGTTTGGGAATGCAGCCCAAATCGGGCGGTGAATTCCGTCCAAGGCTAAATACTGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGGAAAGATGAAAAGGACTTTGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGGGAAGCGGATGGGGGCCGGCGATGCGCCCCGGTCGGATGTGGAACGGCGACGAGCCGGTCCGCCGATCGACTCGGGGCGTGGACCAGCGTGGATTGGGGGGGCGGCCAAAGCCCGGGCTCTCGATACGCCCGTGGAACGCCGTCTCCCCGATTGTGGAAGGCAGCGCGCGCCTCCGGCGTGCTTCGGCATCTGCGCGCTCCGGACGCTGGCCTGTGGGCTCCCCATTCGACCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGCGAGTAAACCCGTAAGGCGTAAGGAAGCTGATTGGTGGGATCCCCCTGAGGGGTGCACCGCCGACCGACCTTGATCTTCTGAGAAGGGTTCGAGTGTGAGCATACCTGTCGGGACCCGAAAGATGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATACTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGAAAGACTAATCGAACCGTCTAGTAGCTGGTTCCCTCCGAAGTTTCCCTCAGGATAGCTGGAGCTCGCGTGCGAGTTCTATCGGGTAAAGCCAATGATTAGAGGCCTCGGGCGCGCAACGCCCTCGACCTATTCTCAAACTTTAAATAGGTAGGACGGCGCGGCTGCTTTGTTGAGCCGCGCCACGGAATCAAGAGCTCCAAGTGGGCCATTTTTGGTAAGCAGAACTGGCGATGCGGGATGAACCGGAAGCCGGGTTACGGTGCCAAACTGCGCGCTAACCTAGATCCCACAAAGGGTG</genome_strand>
        <mrna_strand>CGCGGGTAAACGGCGGGAGTAACTATGACTCTCTTAAGGNNNCCAAATGCCTCGTCATCTAATTAGTGACGCGCATGAATGGATTAACGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCAGAATCAGCGGGGAAANAAGACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGTATAAGTGGGAGCCGAAAGGCGAAAGTGAAATACCACTACTTTTAACGTTATTTTACTTATTCCGTGAATCGGAAGCGGGGCACTGCCCCTCTTTTTGGACCCAAGGCTTGCTT-GCAGGCCGATCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCGAAAGACTAATCGAACCGTCTAGTAGCTGGTTCCCTCCGAAGTTTCCCTCAGGATAGCTGGAGCTCGCGTGCGAGTTCTATCGGGTAAAGCCAATGATTAGAGGCATCGGGGGCGCAACGCCCTCGACCTATTCTCAAACTTTAAATAGGTAGGACGGCGCGGCTGCTTTGTTGAGCCGCGCCACGGAATCAAGAGCTCCAAGTGGGCCATTTTTGGTAAGCAGAACTGGCGATGCGGGATGAACCGGAAGCCGGGTTACGGTGCCAAACTGCGCGCTAACCTANATCCCACAAAGGGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U591923" ref_strand="+" ref_description="SGN-U591923 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|124484405|dbj|BAF46313.1| (e_value=2e-19) putative; ">
      <seq>ccgggcaggtacgaatacgaaccgtgaaagcgtggcctaacgatcctttagaccttcggaattcgaagctagaggtgtcagaaaagttaccacagggataactggcttgtggcanccaancgttcataacgacgttgctttttnatccttcnatgtccgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0089P21.1" temp_strand="+" temp_description="C02SLe0089P21.1  AC215459.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0089P21 sequenced_by:kribb upload_account_name:korea">
        <position start="3253" stop="4007"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3556" g_stop="3707" g_length="152"/>
          <reference_exon_boundary r_type="cDNA" r_start="10" r_stop="161" r_length="152" r_score="0.961"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0089P21.1" gen_strand="+" ref_id="SGN-U591923" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>152</cumulative_length_of_scored_exons>
        <coverage percentage="0.944" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0089P21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U591923" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3556" e_stop="3707"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACGAATACGAACCGTGAAAGCGTGGCCTAACGATCCTTTAGACCTTCGGAATTCGAAGCTAGAGGTGTCAGAAAAGTTACCACAGGGATAACTGGCTTGTGGCAGCCAAGCGTTCATAGCGACGTTGCTTTTTGATCCTTCGATGTCGGCT</genome_strand>
        <mrna_strand>TACGAATACGAACCGTGAAAGCGTGGCCTAACGATCCTTTAGACCTTCGGAATTCGAAGCTAGAGGTGTCAGAAAAGTTACCACAGGGATAACTGGCTTGTGGCANCCAANCGTTCATAACGACGTTGCTTTTTNATCCTTCNATGTCCGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U582171" ref_strand="+" ref_description="SGN-U582171 Tomato 200607#2 [4 ESTs aligned] ">
      <seq>caggtttgatatgcatggaggttgtttcaaaatcctttgatttatgtacgccatgaacatccgcatgttttgtttggaactcgatgaatgttgcgcaagccacgaccgatgcgggcaggccacggccgaccgttgtgtgcaggcacgtccgacgacggccgaccgtttgtgctgtccaagggctatgatggcatgccacgcccgacgacggccgaccgtctatgctgtcaaagggcgaagatggcatgccacgcccgacgacggacgaccgtctatgctgtcaaagggcgaagatggcatgccacgcccgacgtcgttcgaccgtgtgtgctgcaaaaaggcgaagatggcatgccacgccagacgccgttcgaccgtgtgtgcccaaaggcgatgatggcatgccacgcccgacgtcgctcgaccgtgtgtgctgcccaaaggcgatggtggcatgccacgcccgacgtcgttcgaccgtgtgtgctgcccaaaggcgtattttgcagtccacgcccgttcggcgcaggcctttgcagatgccgcctggccgcggacgtgctgcgtacgcagacccatttgccccttgacatctaacttggctttaataatcgcacccgacatcccgaaaacctcttacagtgacatgtcattagtcccttaacatgtcattaggcttgataaatgaactcaacttcacgaaaaactcgcaatggggctcagaacgcatagctcaacacttagcggcagactagtgaacttcacttgccgtgttacttttgaaacttatatttcaacacttagttattttttcctcttcgaaggatgcaggcagcacgcgaacctcacatttgaaaagttagaaatgattggatttgattttggggaagg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0089P21.1" temp_strand="-" temp_description="C02SLe0089P21.1  AC215459.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0089P21 sequenced_by:kribb upload_account_name:korea">
        <position start="5525" stop="3930"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="5226" g_stop="4759" g_length="468"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="468" r_length="468" r_score="0.991"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="4758" i_stop="4653" i_length="106">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="4652" g_stop="4230" g_length="423"/>
          <reference_exon_boundary r_type="cDNA" r_start="469" r_stop="891" r_length="423" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0089P21.1" gen_strand="-" ref_id="SGN-U582171" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>891</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0089P21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U582171" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="5226" e_stop="4759"/>
          <exon e_start="4652" e_stop="4230"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATGTTTGTTATGCATGGAGGTTGTTTCAAAATCCTTTGATTTATGTACGCCATGAACATCCGCATGTTTTGTTTGGAACTCGATGAATGTTGCGCAAGCCACGACCGATGCGGGCAGGCCACGGCCGACCGTTGTGTGCAGGCACGTCCGACGACGGCCGACCGTTTGTGCTGTCCAAGGGCTATGATGGCATGCCACGCCCGACGACGGCCGACCGTCTATGCTGTCAAAGGGCGAAGATGGCATGCCACGCCCGACGACGGCCGACCGTCTATGCTGTCAAAGGGCGAAGATGGCATGCCACGCCCGACGTCGTTCGACCGTGTGTGCTGCAAAAAGGCGAAGATGGCATGCCACGCCAGACGCCGTTCGACCGTGTGTGCCCAAAGGCGATGATGGCATGCCACGCCCGACGTCGCTCGACCGTGTGTGCTGCCCAAAGGCGATGGTGGCATGCCACGCCCGACGTCGTTCGACCGTTTGTACTGCCCAAAGGCGATGATGGCATGCCACGCCCGACGTCGCTCGAACGTGTGTGCTGCCCAAAGGCGATGATGACATGCCACGCCCGACGTCGTTCGACCGTGTGTGCTGCCCAAAGGCGTATTTTGCAGTCCACGCCCGTTCGGCGCAGGCCTTTGCAGATGCCGCCTGGCCGCGGACGTGCTGCGTACGCAGACCCATTTGCCCCTTGACATCTAACTTGGCTTTAATAATCGCACCCGACATCCCGAAAACCTCTTACAGTGACATGTCATTAGTCCCTTAACATGTCATTAGGCTTGATAAATGAACTCAACTTCACGAAAAACTCGCAATGGGGCTCAGAACGCATAGCTCAACACTTAGCGGCAGACTAGTGAACTTCACTTGCCGTGTTACTTTTGAAACTTATATTTCAACACTTAGTTATTTTTTCCTCTTCGAAGGATGCAGGCAGCACGCGAACCTCACATTTGAAAAGTTAGAAATGATTGGATTTGATTTTGGGGGAGG</genome_strand>
        <mrna_strand>CAGGTTTGATATGCATGGAGGTTGTTTCAAAATCCTTTGATTTATGTACGCCATGAACATCCGCATGTTTTGTTTGGAACTCGATGAATGTTGCGCAAGCCACGACCGATGCGGGCAGGCCACGGCCGACCGTTGTGTGCAGGCACGTCCGACGACGGCCGACCGTTTGTGCTGTCCAAGGGCTATGATGGCATGCCACGCCCGACGACGGCCGACCGTCTATGCTGTCAAAGGGCGAAGATGGCATGCCACGCCCGACGACGGACGACCGTCTATGCTGTCAAAGGGCGAAGATGGCATGCCACGCCCGACGTCGTTCGACCGTGTGTGCTGCAAAAAGGCGAAGATGGCATGCCACGCCAGACGCCGTTCGACCGTGTGTGCCCAAAGGCGATGATGGCATGCCACGCCCGACGTCGCTCGACCGTGTGTGCTGCCCAAAGGCGATGGTGGCATGCCACGCCCGAC..........................................................................................................GTCGTTCGACCGTGTGTGCTGCCCAAAGGCGTATTTTGCAGTCCACGCCCGTTCGGCGCAGGCCTTTGCAGATGCCGCCTGGCCGCGGACGTGCTGCGTACGCAGACCCATTTGCCCCTTGACATCTAACTTGGCTTTAATAATCGCACCCGACATCCCGAAAACCTCTTACAGTGACATGTCATTAGTCCCTTAACATGTCATTAGGCTTGATAAATGAACTCAACTTCACGAAAAACTCGCAATGGGGCTCAGAACGCATAGCTCAACACTTAGCGGCAGACTAGTGAACTTCACTTGCCGTGTTACTTTTGAAACTTATATTTCAACACTTAGTTATTTTTTCCTCTTCGAAGGATGCAGGCAGCACGCGAACCTCACATTTGAAAAGTTAGAAATGATTGGATTTGATTTTGGGGAAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U600447" ref_strand="+" ref_description="SGN-U600447 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>cgatattttccctattttttattaatttattactaatttttcggaattttcgaaaaaaataaaaattaaaaaaaattgttgaaaaatatttttttatacatattaaagtcaattatgaaggctgatgtgtgtttgtaccttagaccgcgcatatttgggttgtacattttcattatgattctctggaaaatccatgtctactcctgtcacatgggcaaaacttttttaagcatatataaggggggtagaggtgttggaggcagactgaggcgcaggcaggcagacggcataggcgtcccgtgggcttagcaggcgtgctgcgtgggcgcttgatggcatgcatggcttgtccgtgctacgccgttgggcgtttacaaaaacacgttggcgacgtcgacgggtcgagtgggcaacggcaggcggacgccgagggcgtcctgtgggcttagtaggcgtgctgcgtgggcgcttgatggcatgcatggctcgtccgtgctacgtcgttgggcgtctacaaaaacatgctagcgacgtttgcggggcaactgaagcgaaggcaggcggacgtcgagggcgtcctgtgggcttagtaggcgtgctgcgtgggcgcttgacggcatgcatggctcgtccgtgctacgccgttgggcgtttacaaaacacgcctgcgacg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0089P21.1" temp_strand="+" temp_description="C02SLe0089P21.1  AC215459.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0089P21 sequenced_by:kribb upload_account_name:korea">
        <position start="5246" stop="6519"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="5546" g_stop="6219" g_length="674"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="673" r_length="673" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0089P21.1" gen_strand="+" ref_id="SGN-U600447" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>674</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0089P21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U600447" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="5546" e_stop="6219"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGATATTTTCCCTATTTTTTATTAATTTATTACTAATTTTTTGGAATTTTTGAAAAAAATAAAAATCAAAAAAAATTGTTGAAAAATATTTTTTTATACATATTAAAGTCAATTATGAAGGCTGATGTGTGTTTGTACCTTAGACCGCGCATATTTGGGTTGTACATTTTCATTATGATTCTCTGGAAAATCCATGTCTACTCCTGTCACATGGGCAAAACTTTTTTAAGCATATATAAGGGGGGTAGAGGTGTTGGAGGCAGACTGAGGCGCAGGCAGGCAGACGGCATAGGCGTCCCGTGGGCTTAGCAGGCGTGCTGCGTGGGCGCTTGATGGCATGCATGGCTTGTCCGTGCTACGCCGTTGGGCGTTTACAAAAACACGTCGGCGACGTCGACGGGTCGAGTGGGCAACGGCAGGCGGACGCCGAGGGCGTCCTGTGGGCTTAGTAGGCGTGCTGCGTGGGCGCTTGATGGCATGCATGGCTCGTCCGTGCTACGTCGTTGGGCGTCTACAAAAACATGCTAGCGACGTTTGCGGGGCAACTGAAGCGAAGGCAGGCGGACGTCGAGGGCGTCCTGTGGGCTTAGTAGGCGTGCTGCGTGGGCGCTTGACGGCATGCATGGCTCGTCCGTGCTACGCCGTTGGGCGTTTACAAAAACACGCCCGCGACG</genome_strand>
        <mrna_strand>CGATATTTTCCCTATTTTTTATTAATTTATTACTAATTTTTCGGAATTTTCGAAAAAAATAAAAATTAAAAAAAATTGTTGAAAAATATTTTTTTATACATATTAAAGTCAATTATGAAGGCTGATGTGTGTTTGTACCTTAGACCGCGCATATTTGGGTTGTACATTTTCATTATGATTCTCTGGAAAATCCATGTCTACTCCTGTCACATGGGCAAAACTTTTTTAAGCATATATAAGGGGGGTAGAGGTGTTGGAGGCAGACTGAGGCGCAGGCAGGCAGACGGCATAGGCGTCCCGTGGGCTTAGCAGGCGTGCTGCGTGGGCGCTTGATGGCATGCATGGCTTGTCCGTGCTACGCCGTTGGGCGTTTACAAAAACACGTTGGCGACGTCGACGGGTCGAGTGGGCAACGGCAGGCGGACGCCGAGGGCGTCCTGTGGGCTTAGTAGGCGTGCTGCGTGGGCGCTTGATGGCATGCATGGCTCGTCCGTGCTACGTCGTTGGGCGTCTACAAAAACATGCTAGCGACGTTTGCGGGGCAACTGAAGCGAAGGCAGGCGGACGTCGAGGGCGTCCTGTGGGCTTAGTAGGCGTGCTGCGTGGGCGCTTGACGGCATGCATGGCTCGTCCGTGCTACGCCGTTGGGCGTTTAC-AAAACACGCCTGCGACG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U581385" ref_strand="+" ref_description="SGN-U581385 Tomato 200607#2 [269 ESTs aligned] (*GB) gi|147826550|emb|CAN70790.1| (e_value=2e-38) hypothetical; ">
      <seq>gttgggtgtgacgctttcttgcaaagaaggcatcggcgtcggcgcccgacatctaatgtcgggcggcggggtggatgtcgggcgtgcatttccggagctattcacgtacggcgcatgagtggtattgggcatgtgtggttaggttggatccctgcttcgagcagcgacgtcctaactcgcatgccaactcggtgacggatgaagcgcaatctaggctggtcggacgtcggaacttcctgtgctgcatacctactgcctaggcattgtgcacgtgcaaacggtcgcctttcgcccctcgcatcccatgcgcggggtgaacccaaaagacgctctcgcgtcccacgccttccctcgatacgtcgtgcgatggcatggtccgtgagcggcgccacaaattctcggatacggtagacgcagtgggcatggggccttcaccggcttctatctgcccaaaacgaatgctccttgcgaatgactgccgcgctcgccttggacccgaccgtgcccgaaagggcgcgccgggctcatgcggcgcgcggcgtcgttgaggaatgctacctggttgagcctgccagtagtcatatgcttgtctcaaagattaagccatgcatgtgtaagtatgaacaaattcagactgtgaaactgcgaatggctcattaaatcagttatagtttgtttgatggtatctactactcggataaccgtagtaattctagagctaatacgtgcaacaaaccccgacttctggaagggatgcatttattagataaaaggtcgacgcgggctctgcccgttgctgcgatgattcatgataactcgacggatcgcacggccatcgtgccggcgacgcatcattcaaatttctgccctatcaactttcgatggtaggatagtggcctaccatggtggtgacgggtgacggagaattagggttcgattccggagagggagcctgagaaacggctaccacatccaaggaaggcagcaggcgcgcaaattacccaatcctgacacggggaggtagtgacaataaataacaataccgggctctatgagtctggtaattggaatgagtacaatctaaatcccttaacgaggatccattggagggcaagtctggtgccagcagccgcggtaattccagctccaatagcgtatatttaagttgttgcagttaaaaagctcgtagttggactttgggatgggccggccggtccgccctaggtgtgcaccggtcgtctcgtcccttctgtcggcgatgcgctcctggccttaattggccgggtcgtgcctccggcgctgttactttgaagaaattagagtgctcaaagcaagcctacgctctgtatacattagcatgggataacattataggatttcggtcctattacgttggccttcgggatcggagtaatgattaacagggacagtcgggggcattcgtatttcatagtcagaggtgaaattcttggatttatgaaagacgaacaactgcgaaagcatttgccaaggatgttttcattaatcaagaacgaaagttgggggctcgaagacgatcagataccgtcctagtctcaaccataaacgatgccgaccagggatcggcggatgttgcttttaggactccgccggcaccttatgagaaatcaaagtttttgggttccggggggagtatggtcgcaaggctgaaacttaaaggaattgacggaagggcaccaccaggagtggagcctgcggcttaatttgactcaacacggggaaacttaccaggtccagacatagtaaggattgacagactgagagctctttcttgattctatgggtggtggtgcatggccgttcttagttggtggagcgatttgtctggttaattccgttaacgaacgagacctcagcctgctaactagctatgcggaggtatcccttcgcggccagcttcttagagggactacggccttttaggccgcggaagtttgaggcaataacaggtctgtgatgcccttagatgttctgggccgcacgcgcgctacactgatgtattcaacgagcttatagccttggccgacaggcccgggtaatctttgaaatttcatcgtgatggggatagatcattgcaattgttggtcttcaacgaggaattcctagtaagcgcgagtcatcagctcgcgttgactacgtccctgccctttgtacacaccgcccgtcgctcctaccgattgaatgatccggtgaaatgttcggatcgcggcgacgtgggcggttcgctgcccgcgacgtcgcgagaagtccattgaaccttatcatttagaggaaggagaagtcgtaacaaggcttccgaacgtgaacctgcggaaggatcattgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0089P21.1" temp_strand="+" temp_description="C02SLe0089P21.1  AC215459.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0089P21 sequenced_by:kribb upload_account_name:korea">
        <position start="6635" stop="9581"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="6917" g_stop="9281" g_length="2365"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="2364" r_length="2364" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0089P21.1" gen_strand="+" ref_id="SGN-U581385" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>2365</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0089P21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U581385" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="6917" e_stop="9281"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCGGGTGTAGCATTGGCCTTGCAAAGAAGGCATCGGCGTCGTCGCACGACATCTAATGTCGGGCGGCGGGGTGGATGTCGGGCGTGCATTTCCGGAGCTATTCACGTACGGCGCATGAGTGGTATTGGGCATGTGTGGTTAGGTTGGATCCCTGCTTCGAGCAGCGACGTCCTAACTCGCATGCCAACTCGGTGACGGATGAAGCGCAATCTAGGCTGGTCGGACGTCGGAACTTCCTGTGCTGCATACCTACTGCCTAGGCATTGTGCACGTGCAAACGGTCGCCTTTCGCCCCTCGCATCCCATGCGCGGGGTGAACCCAAAAGACGCTCTCGCGTCCCACGCCTTCCCTCGCTTCGTCGTGCGATGGCGTGGTCCGTGAGCGGCGCCTCGAATTCTCGGATACGGTAGACGCAGTGGGCATGGGGCCTTCACCGGCTTCTATCTGCCCAAAACGAATGCTCCTTGCGAATGACTGCCGCGCTCGCCTTGGACCCGACCGTGCCCGAAAGGGCGCGCCGGGCTCATGCGGCGCGCGGCGTCGTTGAGGAATGCTACCTGGTTGATCCTGCCAGTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACAAATTCAGACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTATCTACTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGAAGGGATGCATTTATTAGATAAAAGGTCGACGCGGGCTCTGCCCGTTGCTGCGATGATTCATGATAACTCGACGGATCGCACGGCCATCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGTGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCTCTATGAGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGACTTTGGGATGGGCCGGCCGGTCCGCCCTAGGTGTGCACCGGTCGTCTCGTCCCTTCTGTCGGCGATGCGCTCCTGGCCTTAATTGGCCGGGTCGTGCCTCCGGCGCTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCATGGGATAACATTATAGGATTTCGGTCCTATTACGTTGGCCTTCGGGATCGGAGTAATGATTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAGACGATCAGATACCGTCCTAGTCTCAACCATAAACGATGCCGACCAGGGATCGGCGGATGTTGCTTTTAGGACTCCGCCGGCACCTTATGAGAAATCAAAGTTTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGGAATTGACGGAAGGGCACCACCAGGAGTGGAGCCTGCGGCTTAATTTGACTCAACACGGGGAAACTTACCAGGTCCAGACATAGTAAGGATTGACAGACTGAGAGCTCTTTCTTGATTCTATGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTCAGCCTGCTAACTAGCTATGCGGAGGTATCCCTTCGCGGCCAGCTTCTTAGAGGGACTACGGCCTTTTAGGCCGCGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGCTTATAGCCTTGGCCGACAGGCCCGGGTAATCTTTGAAATTTCATCGTGATGGGGATAGATCATTGCAATTGTTGGTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTACGTCCCTGCCCTTTGTACACACCGCCCGTCGCTCCTACCGATTGAATGATCCGGTGAAATGTTCGGATCGCGGCGACGTGGGCGGTTCGCTGCCCGCGACGTCGCGAGAAGTCCATTGAACCTTATCATTTAGAGGAAGGAGAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTGT</genome_strand>
        <mrna_strand>GTTGGGTGTGACGCT-TTCTTGCAAAGAAGGCATCGGCGTCGGCGCCCGACATCTAATGTCGGGCGGCGGGGTGGATGTCGGGCGTGCATTTCCGGAGCTATTCACGTACGGCGCATGAGTGGTATTGGGCATGTGTGGTTAGGTTGGATCCCTGCTTCGAGCAGCGACGTCCTAACTCGCATGCCAACTCGGTGACGGATGAAGCGCAATCTAGGCTGGTCGGACGTCGGAACTTCCTGTGCTGCATACCTACTGCCTAGGCATTGTGCACGTGCAAACGGTCGCCTTTCGCCCCTCGCATCCCATGCGCGGGGTGAACCCAAAAGACGCTCTCGCGTCCCACGCCTTCCCTCGATACGTCGTGCGATGGCATGGTCCGTGAGCGGCGCCACAAATTCTCGGATACGGTAGACGCAGTGGGCATGGGGCCTTCACCGGCTTCTATCTGCCCAAAACGAATGCTCCTTGCGAATGACTGCCGCGCTCGCCTTGGACCCGACCGTGCCCGAAAGGGCGCGCCGGGCTCATGCGGCGCGCGGCGTCGTTGAGGAATGCTACCTGGTTGAGCCTGCCAGTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACAAATTCAGACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTATCTACTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGAAGGGATGCATTTATTAGATAAAAGGTCGACGCGGGCTCTGCCCGTTGCTGCGATGATTCATGATAACTCGACGGATCGCACGGCCATCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGTGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCTCTATGAGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGACTTTGGGATGGGCCGGCCGGTCCGCCCTAGGTGTGCACCGGTCGTCTCGTCCCTTCTGTCGGCGATGCGCTCCTGGCCTTAATTGGCCGGGTCGTGCCTCCGGCGCTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCATGGGATAACATTATAGGATTTCGGTCCTATTACGTTGGCCTTCGGGATCGGAGTAATGATTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAGACGATCAGATACCGTCCTAGTCTCAACCATAAACGATGCCGACCAGGGATCGGCGGATGTTGCTTTTAGGACTCCGCCGGCACCTTATGAGAAATCAAAGTTTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGGAATTGACGGAAGGGCACCACCAGGAGTGGAGCCTGCGGCTTAATTTGACTCAACACGGGGAAACTTACCAGGTCCAGACATAGTAAGGATTGACAGACTGAGAGCTCTTTCTTGATTCTATGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTCAGCCTGCTAACTAGCTATGCGGAGGTATCCCTTCGCGGCCAGCTTCTTAGAGGGACTACGGCCTTTTAGGCCGCGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGCTTATAGCCTTGGCCGACAGGCCCGGGTAATCTTTGAAATTTCATCGTGATGGGGATAGATCATTGCAATTGTTGGTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTACGTCCCTGCCCTTTGTACACACCGCCCGTCGCTCCTACCGATTGAATGATCCGGTGAAATGTTCGGATCGCGGCGACGTGGGCGGTTCGCTGCCCGCGACGTCGCGAGAAGTCCATTGAACCTTATCATTTAGAGGAAGGAGAAGTCGTAACAAGGCTTCCGAACGTGAACCTGCGGAAGGATCATTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U590815" ref_strand="+" ref_description="SGN-U590815 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|170573746|ref|XP_001892585.1| (e_value=2e-17) hypothetical; ">
      <seq>gcctgtcagtagtcatatgcttgtctcaaagattaagccatgcatgtgtaagtatgaacaaattcagactgtgaaactgcgaatggctcattaaatcagttatagtttgtttgatggtatctactactcggataaccgtagtaattctagagctaatacgtgcaacaaaccccgacttctggaagggatgcatttattagataaaaggtcgacgcgggctctgcccgttgctgcgatgattcatgataactcgacggatcgcacggccatcgtgccggcgacgcatcattcaaatttctgccctatcaactttcgatggtaggatagtggcctaccatggtggtgacgggtgacggagaattagggttcgattccggagagggagcctgagaaacggctaccacatccaaggaaggcagcaggcgcgcaaattacccaatcctgacacggggaggtagtgacaataaataacaataccgggctttatgagtctggtaattggaatgagtacaatctaaatcccttaacgaggatccattggagggcaagtctggtgccagcagccgcggtaattccagctccaatagcgtatatttaagttgttgcagttaaaaagctcgtagttggactttgggatgggccggccggtccgccctangtgtgcaccggtcgtctcgtcccttctgtcggcgatgcgctcctggccttaattggccgggtcgtgcctccggcgctgttactttgaagaaattagagtgctcaaagcaagcctacgctctgtatacattagcatggaaataatcattacatttgctttggtgtacacagtgtacgccacaacagctga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0089P21.1" temp_strand="+" temp_description="C02SLe0089P21.1  AC215459.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0089P21 sequenced_by:kribb upload_account_name:korea">
        <position start="7185" stop="8590"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7484" g_stop="8279" g_length="796"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="796" r_length="796" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0089P21.1" gen_strand="+" ref_id="SGN-U590815" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>796</cumulative_length_of_scored_exons>
        <coverage percentage="0.940" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0089P21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U590815" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7484" e_stop="8279"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCTGCCAGTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACAAATTCAGACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTATCTACTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGAAGGGATGCATTTATTAGATAAAAGGTCGACGCGGGCTCTGCCCGTTGCTGCGATGATTCATGATAACTCGACGGATCGCACGGCCATCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGTGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCTCTATGAGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGACTTTGGGATGGGCCGGCCGGTCCGCCCTAGGTGTGCACCGGTCGTCTCGTCCCTTCTGTCGGCGATGCGCTCCTGGCCTTAATTGGCCGGGTCGTGCCTCCGGCGCTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCATGGG</genome_strand>
        <mrna_strand>GCCTGTCAGTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACAAATTCAGACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTATCTACTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGAAGGGATGCATTTATTAGATAAAAGGTCGACGCGGGCTCTGCCCGTTGCTGCGATGATTCATGATAACTCGACGGATCGCACGGCCATCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGTGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCTTTATGAGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGACTTTGGGATGGGCCGGCCGGTCCGCCCTANGTGTGCACCGGTCGTCTCGTCCCTTCTGTCGGCGATGCGCTCCTGGCCTTAATTGGCCGGGTCGTGCCTCCGGCGCTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCATGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U590748" ref_strand="+" ref_description="SGN-U590748 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>gtgaaactgcgaatggcttattaaatcagttatagtttgtttgatggtatctactactcggataaccgtagtaattctagagctaatacgtgcaacaaaccccgacttctggaagggatgcatttattagataaaaggtcgacgcggtctctgtccgttgttgcgatgatttatgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0089P21.1" temp_strand="+" temp_description="C02SLe0089P21.1  AC215459.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0089P21 sequenced_by:kribb upload_account_name:korea">
        <position start="7254" stop="8030"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7554" g_stop="7730" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="177" r_length="177" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0089P21.1" gen_strand="+" ref_id="SGN-U590748" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>177</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0089P21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U590748" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7554" e_stop="7730"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTATCTACTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGAAGGGATGCATTTATTAGATAAAAGGTCGACGCGGGCTCTGCCCGTTGCTGCGATGATTCATGAT</genome_strand>
        <mrna_strand>GTGAAACTGCGAATGGCTTATTAAATCAGTTATAGTTTGTTTGATGGTATCTACTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGAAGGGATGCATTTATTAGATAAAAGGTCGACGCGGTCTCTGTCCGTTGTTGCGATGATTTATGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U591208" ref_strand="+" ref_description="SGN-U591208 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|50307719|ref|XP_453852.1| (e_value=2e-13) unnamed protein product [Kluyveromyces lactis]; ">
      <seq>gaccaggtccagacatagtatggattgacagactgagagctctttcttgatactatgggtggtggtgcatggccgttcttacctggtggagcgatttgtctgggtaattccgataacgaacgaaacctcaacct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0089P21.1" temp_strand="+" temp_description="C02SLe0089P21.1  AC215459.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0089P21 sequenced_by:kribb upload_account_name:korea">
        <position start="8383" stop="9115"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8682" g_stop="8815" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="134" r_length="134" r_score="0.933"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0089P21.1" gen_strand="+" ref_id="SGN-U591208" ref_strand="+">
        <total_alignment_score>0.933</total_alignment_score>
        <cumulative_length_of_scored_exons>134</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0089P21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U591208" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8682" e_stop="8815"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACCAGGTCCAGACATAGTAAGGATTGACAGACTGAGAGCTCTTTCTTGATTCTATGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTCAGCCT</genome_strand>
        <mrna_strand>GACCAGGTCCAGACATAGTATGGATTGACAGACTGAGAGCTCTTTCTTGATACTATGGGTGGTGGTGCATGGCCGTTCTTACCTGGTGGAGCGATTTGTCTGGGTAATTCCGATAACGAACGAAACCTCAACCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U592501" ref_strand="+" ref_description="SGN-U592501 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|41052959|dbj|BAD07869.1| (e_value=3e-19) hypothetical; ">
      <seq>ggggcgaccccaggtcaggcgggattacccgctgagtttaagcatatcaataagcggaggaaaagaaacttacaaggattcccctagtaacggcgagcgaaccgggaacagcccagccttagaatcgggcggctccgtcgtccgaattgtcgtctggagaagcgtcctcagcggcggaccgggcccaagtcccctggaagggggcgccgganagggtgagagccccgtcgtgcccggaccctgtcgcaccacgaggcgctgtctacgagtcnggnnngtttgggnaatgcagcccanatcggggcggngaattccgtcnanggctaaatactgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0089P21.1" temp_strand="+" temp_description="C02SLe0089P21.1  AC215459.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0089P21 sequenced_by:kribb upload_account_name:korea">
        <position start="9582" stop="10452"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9879" g_stop="10209" g_length="331"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="334" r_length="334" r_score="0.946"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0089P21.1" gen_strand="+" ref_id="SGN-U592501" ref_strand="+">
        <total_alignment_score>0.946</total_alignment_score>
        <cumulative_length_of_scored_exons>331</cumulative_length_of_scored_exons>
        <coverage percentage="0.991" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0089P21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U592501" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9879" e_stop="10209"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCGCGACCCCAGGTCAGGCGGGATTACCCGCTGAGTTTAAGCATATCAATAAGCGGAGGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAACAGCCCAGCCTTAGAATCGGGCGGCTCCGTCGTCCGAATTGTAGTCTGGAGAAGCGTCCTCAGCGGCGGACCGGGCCCAAGTCCCCTGGAAGGGGGCGCCGGAGAGGGTGAGAGCCCCGTCGTGCCCGGACCCTGTCGCACCACGAGGCGCTGTCTACGAGTC-GGGTTGTTTGGG-AATGCAGCCCAAATC-GGGCGGTGAATTCCGTCCAAGGCTAAATACTGG</genome_strand>
        <mrna_strand>GGGGCGACCCCAGGTCAGGCGGGATTACCCGCTGAGTTTAAGCATATCAATAAGCGGAGGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAACAGCCCAGCCTTAGAATCGGGCGGCTCCGTCGTCCGAATTGTCGTCTGGAGAAGCGTCCTCAGCGGCGGACCGGGCCCAAGTCCCCTGGAAGGGGGCGCCGGANAGGGTGAGAGCCCCGTCGTGCCCGGACCCTGTCGCACCACGAGGCGCTGTCTACGAGTCNGGNNNGTTTGGGNAATGCAGCCCANATCGGGGCGGNGAATTCCGTCNANGGCTAAATACTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U591923" ref_strand="+" ref_description="SGN-U591923 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|124484405|dbj|BAF46313.1| (e_value=2e-19) putative; ">
      <seq>ccgggcaggtacgaatacgaaccgtgaaagcgtggcctaacgatcctttagaccttcggaattcgaagctagaggtgtcagaaaagttaccacagggataactggcttgtggcanccaancgttcataacgacgttgctttttnatccttcnatgtccgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0089P21.1" temp_strand="+" temp_description="C02SLe0089P21.1  AC215459.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0089P21 sequenced_by:kribb upload_account_name:korea">
        <position start="12311" stop="13065"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12614" g_stop="12765" g_length="152"/>
          <reference_exon_boundary r_type="cDNA" r_start="10" r_stop="161" r_length="152" r_score="0.961"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0089P21.1" gen_strand="+" ref_id="SGN-U591923" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>152</cumulative_length_of_scored_exons>
        <coverage percentage="0.944" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0089P21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U591923" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12614" e_stop="12765"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACGAATACGAACCGTGAAAGCGTGGCCTAACGATCCTTTAGACCTTCGGAATTCGAAGCTAGAGGTGTCAGAAAAGTTACCACAGGGATAACTGGCTTGTGGCAGCCAAGCGTTCATAGCGACGTTGCTTTTTGATCCTTCGATGTCGGCT</genome_strand>
        <mrna_strand>TACGAATACGAACCGTGAAAGCGTGGCCTAACGATCCTTTAGACCTTCGGAATTCGAAGCTAGAGGTGTCAGAAAAGTTACCACAGGGATAACTGGCTTGTGGCANCCAANCGTTCATAACGACGTTGCTTTTTNATCCTTCNATGTCCGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U600447" ref_strand="+" ref_description="SGN-U600447 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>cgatattttccctattttttattaatttattactaatttttcggaattttcgaaaaaaataaaaattaaaaaaaattgttgaaaaatatttttttatacatattaaagtcaattatgaaggctgatgtgtgtttgtaccttagaccgcgcatatttgggttgtacattttcattatgattctctggaaaatccatgtctactcctgtcacatgggcaaaacttttttaagcatatataaggggggtagaggtgttggaggcagactgaggcgcaggcaggcagacggcataggcgtcccgtgggcttagcaggcgtgctgcgtgggcgcttgatggcatgcatggcttgtccgtgctacgccgttgggcgtttacaaaaacacgttggcgacgtcgacgggtcgagtgggcaacggcaggcggacgccgagggcgtcctgtgggcttagtaggcgtgctgcgtgggcgcttgatggcatgcatggctcgtccgtgctacgtcgttgggcgtctacaaaaacatgctagcgacgtttgcggggcaactgaagcgaaggcaggcggacgtcgagggcgtcctgtgggcttagtaggcgtgctgcgtgggcgcttgacggcatgcatggctcgtccgtgctacgccgttgggcgtttacaaaacacgcctgcgacg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0089P21.1" temp_strand="+" temp_description="C02SLe0089P21.1  AC215459.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0089P21 sequenced_by:kribb upload_account_name:korea">
        <position start="13989" stop="15262"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14289" g_stop="14962" g_length="674"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="673" r_length="673" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0089P21.1" gen_strand="+" ref_id="SGN-U600447" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>674</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0089P21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U600447" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14289" e_stop="14962"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGATATTTTCCCTATTTTTTATTAATTTATTACTAATTTTTTGGAATTTTTGAAAAAAATAAAAATCAAAAAAAATTGTTGAAAAATATTTTTTTATACATATTAAAGTCAATTATGAAGGCTGATGTGTGTTTGTACCTTAGACCGCGCATATTTGGGTTGTACATTTTCATTATGATTCTCTGGAAAATCCATGTCTACTCCTGTCACATGGGCAAAACTTTTTTAAGCATATATAAGGGGGGTAGAGGTGTTGGAGGCAGACTGAGGCGCAGGCAGGCAGACGGCATAGGCGTCCCGTGGGCTTAGCAGGCGTGCTGCGTGGGCGCTTGATGGCATGCATGGCTTGTCCGTGCTACGCCGTTGGGCGTTTACAAAAACACGTCGGCGACGTCGACGGGTCGAGTGGGCAACGGCAGGCGGACGCCGAGGGCGTCCTGTGGGCTTAGTAGGCGTGCTGCGTGGGCGCTTGATGGCATGCATGGCTCGTCCGTGCTACGTCGTTGGGCGTCTACAAAAACATGCTAGCGACGTTTGCGGGGCAACTGAAGCGAAGGCAGGCGGACGTCGAGGGCGTCCTGTGGGCTTAGTAGGCGTGCTGCGTGGGCGCTTGACGGCATGCATGGCTCGTCCGTGCTACGCCGTTGGGCGTTTACAAAAACACGCCCGCGACG</genome_strand>
        <mrna_strand>CGATATTTTCCCTATTTTTTATTAATTTATTACTAATTTTTCGGAATTTTCGAAAAAAATAAAAATTAAAAAAAATTGTTGAAAAATATTTTTTTATACATATTAAAGTCAATTATGAAGGCTGATGTGTGTTTGTACCTTAGACCGCGCATATTTGGGTTGTACATTTTCATTATGATTCTCTGGAAAATCCATGTCTACTCCTGTCACATGGGCAAAACTTTTTTAAGCATATATAAGGGGGGTAGAGGTGTTGGAGGCAGACTGAGGCGCAGGCAGGCAGACGGCATAGGCGTCCCGTGGGCTTAGCAGGCGTGCTGCGTGGGCGCTTGATGGCATGCATGGCTTGTCCGTGCTACGCCGTTGGGCGTTTACAAAAACACGTTGGCGACGTCGACGGGTCGAGTGGGCAACGGCAGGCGGACGCCGAGGGCGTCCTGTGGGCTTAGTAGGCGTGCTGCGTGGGCGCTTGATGGCATGCATGGCTCGTCCGTGCTACGTCGTTGGGCGTCTACAAAAACATGCTAGCGACGTTTGCGGGGCAACTGAAGCGAAGGCAGGCGGACGTCGAGGGCGTCCTGTGGGCTTAGTAGGCGTGCTGCGTGGGCGCTTGACGGCATGCATGGCTCGTCCGTGCTACGCCGTTGGGCGTTTAC-AAAACACGCCTGCGACG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U590815" ref_strand="+" ref_description="SGN-U590815 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|170573746|ref|XP_001892585.1| (e_value=2e-17) hypothetical; ">
      <seq>gcctgtcagtagtcatatgcttgtctcaaagattaagccatgcatgtgtaagtatgaacaaattcagactgtgaaactgcgaatggctcattaaatcagttatagtttgtttgatggtatctactactcggataaccgtagtaattctagagctaatacgtgcaacaaaccccgacttctggaagggatgcatttattagataaaaggtcgacgcgggctctgcccgttgctgcgatgattcatgataactcgacggatcgcacggccatcgtgccggcgacgcatcattcaaatttctgccctatcaactttcgatggtaggatagtggcctaccatggtggtgacgggtgacggagaattagggttcgattccggagagggagcctgagaaacggctaccacatccaaggaaggcagcaggcgcgcaaattacccaatcctgacacggggaggtagtgacaataaataacaataccgggctttatgagtctggtaattggaatgagtacaatctaaatcccttaacgaggatccattggagggcaagtctggtgccagcagccgcggtaattccagctccaatagcgtatatttaagttgttgcagttaaaaagctcgtagttggactttgggatgggccggccggtccgccctangtgtgcaccggtcgtctcgtcccttctgtcggcgatgcgctcctggccttaattggccgggtcgtgcctccggcgctgttactttgaagaaattagagtgctcaaagcaagcctacgctctgtatacattagcatggaaataatcattacatttgctttggtgtacacagtgtacgccacaacagctga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0089P21.1" temp_strand="+" temp_description="C02SLe0089P21.1  AC215459.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0089P21 sequenced_by:kribb upload_account_name:korea">
        <position start="15928" stop="17333"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16227" g_stop="17022" g_length="796"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="796" r_length="796" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0089P21.1" gen_strand="+" ref_id="SGN-U590815" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>796</cumulative_length_of_scored_exons>
        <coverage percentage="0.940" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0089P21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U590815" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16227" e_stop="17022"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCTGCCAGTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACAAATTCAGACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTATCTACTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGAAGGGATGCATTTATTAGATAAAAGGTCGACGCGGGCTCTGCCCGTTGCTGCGATGATTCATGATAACTCGACGGATCGCACGGCCATCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGTGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCTCTATGAGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGACTTTGGGATGGGCCGGCCGGTCCGCCCTAGGTGTGCACCGGTCGTCTCGTCCCTTCTGTCGGCGATGCGCTCCTGGCCTTAATTGGCCGGGTCGTGCCTCCGGCGCTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCATGGG</genome_strand>
        <mrna_strand>GCCTGTCAGTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACAAATTCAGACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTATCTACTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGAAGGGATGCATTTATTAGATAAAAGGTCGACGCGGGCTCTGCCCGTTGCTGCGATGATTCATGATAACTCGACGGATCGCACGGCCATCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGTGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCTTTATGAGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGACTTTGGGATGGGCCGGCCGGTCCGCCCTANGTGTGCACCGGTCGTCTCGTCCCTTCTGTCGGCGATGCGCTCCTGGCCTTAATTGGCCGGGTCGTGCCTCCGGCGCTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCATGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U590748" ref_strand="+" ref_description="SGN-U590748 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>gtgaaactgcgaatggcttattaaatcagttatagtttgtttgatggtatctactactcggataaccgtagtaattctagagctaatacgtgcaacaaaccccgacttctggaagggatgcatttattagataaaaggtcgacgcggtctctgtccgttgttgcgatgatttatgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0089P21.1" temp_strand="+" temp_description="C02SLe0089P21.1  AC215459.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0089P21 sequenced_by:kribb upload_account_name:korea">
        <position start="15997" stop="16773"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16297" g_stop="16473" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="177" r_length="177" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0089P21.1" gen_strand="+" ref_id="SGN-U590748" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>177</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0089P21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U590748" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16297" e_stop="16473"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTATCTACTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGAAGGGATGCATTTATTAGATAAAAGGTCGACGCGGGCTCTGCCCGTTGCTGCGATGATTCATGAT</genome_strand>
        <mrna_strand>GTGAAACTGCGAATGGCTTATTAAATCAGTTATAGTTTGTTTGATGGTATCTACTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGAAGGGATGCATTTATTAGATAAAAGGTCGACGCGGTCTCTGTCCGTTGTTGCGATGATTTATGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U591208" ref_strand="+" ref_description="SGN-U591208 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|50307719|ref|XP_453852.1| (e_value=2e-13) unnamed protein product [Kluyveromyces lactis]; ">
      <seq>gaccaggtccagacatagtatggattgacagactgagagctctttcttgatactatgggtggtggtgcatggccgttcttacctggtggagcgatttgtctgggtaattccgataacgaacgaaacctcaacct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0089P21.1" temp_strand="+" temp_description="C02SLe0089P21.1  AC215459.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0089P21 sequenced_by:kribb upload_account_name:korea">
        <position start="17126" stop="17795"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17425" g_stop="17558" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="134" r_length="134" r_score="0.933"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0089P21.1" gen_strand="+" ref_id="SGN-U591208" ref_strand="+">
        <total_alignment_score>0.933</total_alignment_score>
        <cumulative_length_of_scored_exons>134</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0089P21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U591208" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17425" e_stop="17558"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACCAGGTCCAGACATAGTAAGGATTGACAGACTGAGAGCTCTTTCTTGATTCTATGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTCAGCCT</genome_strand>
        <mrna_strand>GACCAGGTCCAGACATAGTATGGATTGACAGACTGAGAGCTCTTTCTTGATACTATGGGTGGTGGTGCATGGCCGTTCTTACCTGGTGGAGCGATTTGTCTGGGTAATTCCGATAACGAACGAAACCTCAACCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>19</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="821" PGL_stop="1151"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="821" e_stop="1151"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.946"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.946">
            <gDNA_exon_boundary e_start="821" e_stop="1151" e_length="331"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="821" stop="1151"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U592501" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACCGCGACCCCAGGTCAGGCGGGATTACCCGCTGAGTTTAAGCATATCAATAAGCGGAGGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAACAGCCCAGCCTTAGAATCGGGCGGCTCCGTCGTCCGAATTGTAGTCTGGAGAAGCGTCCTCAGCGGCGGACCGGGCCCAAGTCCCCTGGAAGGGGGCGCCGGAGAGGGTGAGAGCCCCGTCGTGCCCGGACCCTGTCGCACCACGAGGCGCTGTCTACGAGTCGGGTTGTTTGGGAATGCAGCCCAAATCGGGCGGTGAATTCCGTCCAAGGCTAAATACTGG</gDNA_template>
            <first_frame> T  A  T  P  G  Q  A  G  L  P  A  E  F  K  H  I  N  K  R  R  K  R  N  L  Q  G  F  P  *  *  R  R  A  N  R  E  Q  P  S  L  R  I  G  R  L  R  R  P  N  C  S  L  E  K  R  P  Q  R  R  T  G  P  K  S  P  G  R  G  R  R  R  G  *  E  P  R  R  A  R  T  L  S  H  H  E  A  L  S  T  S  R  V  V  W  E  C  S  P  N  R  A  V  N  S  V  Q  G  *  I  L  </first_frame>
            <second_frame>  P  R  P  Q  V  R  R  D  Y  P  L  S  L  S  I  S  I  S  G  G  K  E  T  Y  K  D  S  P  S  N  G  E  R  T  G  N  S  P  A  L  E  S  G  G  S  V  V  R  I  V  V  W  R  S  V  L  S  G  G  P  G  P  S  P  L  E  G  G  A  G  E  G  E  S  P  V  V  P  G  P  C  R  T  T  R  R  C  L  R  V  G  L  F  G  N  A  A  Q  I  G  R  *  I  P  S  K  A  K  Y  W </second_frame>
            <third_frame>   R  D  P  R  S  G  G  I  T  R  *  V  *  A  Y  Q  *  A  E  E  K  K  L  T  R  I  P  L  V  T  A  S  E  P  G  T  A  Q  P  *  N  R  A  A  P  S  S  E  L  *  S  G  E  A  S  S  A  A  D  R  A  Q  V  P  W  K  G  A  P  E  R  V  R  A  P  S  C  P  D  P  V  A  P  R  G  A  V  Y  E  S  G  C  L  G  M  Q  P  K  S  G  G  E  F  R  P  R  L  N  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0089P21.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="822" stop="1127"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>303</number_coding_nucleotides>
                  <number_encoded_amino_acids>101</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PRPQVRRDYPLSLSISISGGKETYKDSPSNGERTGNSPALESGGSVVRIVVWRSVLSGGPGPSPLEGGAGEGESPVVPGPCRTTRRCLRVGLFGNAAQIGR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="2758" PGL_stop="846"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="2758" e_stop="2673"/>
            <exon e_start="926" e_stop="846"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.953"/>
          <exon-only e_score="0.914"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.953">
            <gDNA_exon_boundary e_start="2758" e_stop="2673" e_length="86"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="2672" i_stop="927" i_length="1746"/>
          </intron>
          <exon e_serial="2" e_score="0.914">
            <gDNA_exon_boundary e_start="926" e_stop="846" e_length="81"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2758" stop="2673"/>
              <exon start="926" stop="846"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U590360" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2758" stop="2673"/>
              <exon start="926" stop="846"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U591296" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CCCGAAGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATCGACCAGAGGCTGTTCACCTTGGAGACCTGATGCG : CCCGGTTCGCTCGCCGTTACTAGGGGAATCCTTGTAAGTTTCTTTTCCTCCGCTTATTGATATGCTTAAACTCAGCGGGTA</gDNA_template>
            <first_frame> P  E  V  T  D  P  F  C  R  L  P  L  P  T  L  F  H  R  P  E  A  V  H  L  G  D  L  M  R :   P  V  R  S  P  L  L  G  E  S  L  *  V  S  F  P  P  L  I  D  M  L  K  L  S  G   </first_frame>
            <second_frame>  P  K  L  R  I  H  F  A  D  F  P  C  L  H  C  S  I  D  Q  R  L  F  T  L  E  T  *  C   : A  R  F  A  R  R  Y  *  G  N  P  C  K  F  L  F  L  R  L  L  I  C  L  N  S  A  G  </second_frame>
            <third_frame>   R  S  Y  G  S  I  L  P  T  S  L  A  Y  I  V  P  S  T  R  G  C  S  P  W  R  P  D  A  :  P  G  S  L  A  V  T  R  G  I  L  V  S  F  F  S  S  A  Y  *  Y  A  *  T  Q  R  V </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLe0089P21.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="1490" PGL_stop="11102"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="6917" e_stop="9281"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.992">
            <gDNA_exon_boundary e_start="6917" e_stop="9281" e_length="2365"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="6917" stop="9281"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U581385" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7484" stop="8279"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U590815" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7554" stop="7730"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U590748" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8682" stop="8815"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U591208" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGCGGGTGTAGCATTGGCCTTGCAAAGAAGGCATCGGCGTCGTCGCACGACATCTAATGTCGGGCGGCGGGGTGGATGTCGGGCGTGCATTTCCGGAGCTATTCACGTACGGCGCATGAGTGGTATTGGGCATGTGTGGTTAGGTTGGATCCCTGCTTCGAGCAGCGACGTCCTAACTCGCATGCCAACTCGGTGACGGATGAAGCGCAATCTAGGCTGGTCGGACGTCGGAACTTCCTGTGCTGCATACCTACTGCCTAGGCATTGTGCACGTGCAAACGGTCGCCTTTCGCCCCTCGCATCCCATGCGCGGGGTGAACCCAAAAGACGCTCTCGCGTCCCACGCCTTCCCTCGCTTCGTCGTGCGATGGCGTGGTCCGTGAGCGGCGCCTCGAATTCTCGGATACGGTAGACGCAGTGGGCATGGGGCCTTCACCGGCTTCTATCTGCCCAAAACGAATGCTCCTTGCGAATGACTGCCGCGCTCGCCTTGGACCCGACCGTGCCCGAAAGGGCGCGCCGGGCTCATGCGGCGCGCGGCGTCGTTGAGGAATGCTACCTGGTTGATCCTGCCAGTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACAAATTCAGACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTATCTACTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGAAGGGATGCATTTATTAGATAAAAGGTCGACGCGGGCTCTGCCCGTTGCTGCGATGATTCATGATAACTCGACGGATCGCACGGCCATCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGTGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCTCTATGAGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGACTTTGGGATGGGCCGGCCGGTCCGCCCTAGGTGTGCACCGGTCGTCTCGTCCCTTCTGTCGGCGATGCGCTCCTGGCCTTAATTGGCCGGGTCGTGCCTCCGGCGCTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCATGGGATAACATTATAGGATTTCGGTCCTATTACGTTGGCCTTCGGGATCGGAGTAATGATTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAGACGATCAGATACCGTCCTAGTCTCAACCATAAACGATGCCGACCAGGGATCGGCGGATGTTGCTTTTAGGACTCCGCCGGCACCTTATGAGAAATCAAAGTTTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGGAATTGACGGAAGGGCACCACCAGGAGTGGAGCCTGCGGCTTAATTTGACTCAACACGGGGAAACTTACCAGGTCCAGACATAGTAAGGATTGACAGACTGAGAGCTCTTTCTTGATTCTATGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTCAGCCTGCTAACTAGCTATGCGGAGGTATCCCTTCGCGGCCAGCTTCTTAGAGGGACTACGGCCTTTTAGGCCGCGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGCTTATAGCCTTGGCCGACAGGCCCGGGTAATCTTTGAAATTTCATCGTGATGGGGATAGATCATTGCAATTGTTGGTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTACGTCCCTGCCCTTTGTACACACCGCCCGTCGCTCCTACCGATTGAATGATCCGGTGAAATGTTCGGATCGCGGCGACGTGGGCGGTTCGCTGCCCGCGACGTCGCGAGAAGTCCATTGAACCTTATCATTTAGAGGAAGGAGAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTGT</gDNA_template>
            <first_frame> G  G  C  S  I  G  L  A  K  K  A  S  A  S  S  H  D  I  *  C  R  A  A  G  W  M  S  G  V  H  F  R  S  Y  S  R  T  A  H  E  W  Y  W  A  C  V  V  R  L  D  P  C  F  E  Q  R  R  P  N  S  H  A  N  S  V  T  D  E  A  Q  S  R  L  V  G  R  R  N  F  L  C  C  I  P  T  A  *  A  L  C  T  C  K  R  S  P  F  A  P  R  I  P  C  A  G  *  T  Q  K  T  L  S  R  P  T  P  S  L  A  S  S  C  D  G  V  V  R  E  R  R  L  E  F  S  D  T  V  D  A  V  G  M  G  P  S  P  A  S  I  C  P  K  R  M  L  L  A  N  D  C  R  A  R  L  G  P  D  R  A  R  K  G  A  P  G  S  C  G  A  R  R  R  *  G  M  L  P  G  *  S  C  Q  *  S  Y  A  C  L  K  D  *  A  M  H  V  *  V  *  T  N  S  D  C  E  T  A  N  G  S  L  N  Q  L  *  F  V  *  W  Y  L  L  L  G  *  P  *  *  F  *  S  *  Y  V  Q  Q  T  P  T  S  G  R  D  A  F  I  R  *  K  V  D  A  G  S  A  R  C  C  D  D  S  *  *  L  D  G  S  H  G  H  R  A  G  D  A  S  F  K  F  L  P  Y  Q  L  S  M  V  G  *  W  P  T  M  V  V  T  G  D  G  E  L  G  F  D  S  G  E  G  A  *  E  T  A  T  T  S  K  E  G  S  R  R  A  N  Y  P  I  L  T  R  G  G  S  D  N  K  *  Q  Y  R  A  L  *  V  W  *  L  E  *  V  Q  S  K  S  L  N  E  D  P  L  E  G  K  S  G  A  S  S  R  G  N  S  S  S  N  S  V  Y  L  S  C  C  S  *  K  A  R  S  W  T  L  G  W  A  G  R  S  A  L  G  V  H  R  S  S  R  P  F  C  R  R  C  A  P  G  L  N  W  P  G  R  A  S  G  A  V  T  L  K  K  L  E  C  S  K  Q  A  Y  A  L  Y  T  L  A  W  D  N  I  I  G  F  R  S  Y  Y  V  G  L  R  D  R  S  N  D  *  Q  G  Q  S  G  A  F  V  F  H  S  Q  R  *  N  S  W  I  Y  E  R  R  T  T  A  K  A  F  A  K  D  V  F  I  N  Q  E  R  K  L  G  A  R  R  R  S  D  T  V  L  V  S  T  I  N  D  A  D  Q  G  S  A  D  V  A  F  R  T  P  P  A  P  Y  E  K  S  K  F  L  G  S  G  G  S  M  V  A  R  L  K  L  K  G  I  D  G  R  A  P  P  G  V  E  P  A  A  *  F  D  S  T  R  G  N  L  P  G  P  D  I  V  R  I  D  R  L  R  A  L  S  *  F  Y  G  W  W  C  M  A  V  L  S  W  W  S  D  L  S  G  *  F  R  *  R  T  R  P  Q  P  A  N  *  L  C  G  G  I  P  S  R  P  A  S  *  R  D  Y  G  L  L  G  R  G  S  L  R  Q  *  Q  V  C  D  A  L  R  C  S  G  P  H  A  R  Y  T  D  V  F  N  E  L  I  A  L  A  D  R  P  G  *  S  L  K  F  H  R  D  G  D  R  S  L  Q  L  L  V  F  N  E  E  F  L  V  S  A  S  H  Q  L  A  L  T  T  S  L  P  F  V  H  T  A  R  R  S  Y  R  L  N  D  P  V  K  C  S  D  R  G  D  V  G  G  S  L  P  A  T  S  R  E  V  H  *  T  L  S  F  R  G  R  R  S  R  N  K  V  S  V  G  E  P  A  E  G  S  L  </first_frame>
            <second_frame>  A  G  V  A  L  A  L  Q  R  R  H  R  R  R  R  T  T  S  N  V  G  R  R  G  G  C  R  A  C  I  S  G  A  I  H  V  R  R  M  S  G  I  G  H  V  W  L  G  W  I  P  A  S  S  S  D  V  L  T  R  M  P  T  R  *  R  M  K  R  N  L  G  W  S  D  V  G  T  S  C  A  A  Y  L  L  P  R  H  C  A  R  A  N  G  R  L  S  P  L  A  S  H  A  R  G  E  P  K  R  R  S  R  V  P  R  L  P  S  L  R  R  A  M  A  W  S  V  S  G  A  S  N  S  R  I  R  *  T  Q  W  A  W  G  L  H  R  L  L  S  A  Q  N  E  C  S  L  R  M  T  A  A  L  A  L  D  P  T  V  P  E  R  A  R  R  A  H  A  A  R  G  V  V  E  E  C  Y  L  V  D  P  A  S  S  H  M  L  V  S  K  I  K  P  C  M  C  K  Y  E  Q  I  Q  T  V  K  L  R  M  A  H  *  I  S  Y  S  L  F  D  G  I  Y  Y  S  D  N  R  S  N  S  R  A  N  T  C  N  K  P  R  L  L  E  G  M  H  L  L  D  K  R  S  T  R  A  L  P  V  A  A  M  I  H  D  N  S  T  D  R  T  A  I  V  P  A  T  H  H  S  N  F  C  P  I  N  F  R  W  *  D  S  G  L  P  W  W  *  R  V  T  E  N  *  G  S  I  P  E  R  E  P  E  K  R  L  P  H  P  R  K  A  A  G  A  Q  I  T  Q  S  *  H  G  E  V  V  T  I  N  N  N  T  G  L  Y  E  S  G  N  W  N  E  Y  N  L  N  P  L  T  R  I  H  W  R  A  S  L  V  P  A  A  A  V  I  P  A  P  I  A  Y  I  *  V  V  A  V  K  K  L  V  V  G  L  W  D  G  P  A  G  P  P  *  V  C  T  G  R  L  V  P  S  V  G  D  A  L  L  A  L  I  G  R  V  V  P  P  A  L  L  L  *  R  N  *  S  A  Q  S  K  P  T  L  C  I  H  *  H  G  I  T  L  *  D  F  G  P  I  T  L  A  F  G  I  G  V  M  I  N  R  D  S  R  G  H  S  Y  F  I  V  R  G  E  I  L  G  F  M  K  D  E  Q  L  R  K  H  L  P  R  M  F  S  L  I  K  N  E  S  W  G  L  E  D  D  Q  I  P  S  *  S  Q  P  *  T  M  P  T  R  D  R  R  M  L  L  L  G  L  R  R  H  L  M  R  N  Q  S  F  W  V  P  G  G  V  W  S  Q  G  *  N  L  K  E  L  T  E  G  H  H  Q  E  W  S  L  R  L  N  L  T  Q  H  G  E  T  Y  Q  V  Q  T  *  *  G  L  T  D  *  E  L  F  L  D  S  M  G  G  G  A  W  P  F  L  V  G  G  A  I  C  L  V  N  S  V  N  E  R  D  L  S  L  L  T  S  Y  A  E  V  S  L  R  G  Q  L  L  R  G  T  T  A  F  *  A  A  E  V  *  G  N  N  R  S  V  M  P  L  D  V  L  G  R  T  R  A  T  L  M  Y  S  T  S  L  *  P  W  P  T  G  P  G  N  L  *  N  F  I  V  M  G  I  D  H  C  N  C  W  S  S  T  R  N  S  *  *  A  R  V  I  S  S  R  *  L  R  P  C  P  L  Y  T  P  P  V  A  P  T  D  *  M  I  R  *  N  V  R  I  A  A  T  W  A  V  R  C  P  R  R  R  E  K  S  I  E  P  Y  H  L  E  E  G  E  V  V  T  R  F  P  *  V  N  L  R  K  D  H  C </second_frame>
            <third_frame>   R  V  *  H  W  P  C  K  E  G  I  G  V  V  A  R  H  L  M  S  G  G  G  V  D  V  G  R  A  F  P  E  L  F  T  Y  G  A  *  V  V  L  G  M  C  G  *  V  G  S  L  L  R  A  A  T  S  *  L  A  C  Q  L  G  D  G  *  S  A  I  *  A  G  R  T  S  E  L  P  V  L  H  T  Y  C  L  G  I  V  H  V  Q  T  V  A  F  R  P  S  H  P  M  R  G  V  N  P  K  D  A  L  A  S  H  A  F  P  R  F  V  V  R  W  R  G  P  *  A  A  P  R  I  L  G  Y  G  R  R  S  G  H  G  A  F  T  G  F  Y  L  P  K  T  N  A  P  C  E  *  L  P  R  S  P  W  T  R  P  C  P  K  G  R  A  G  L  M  R  R  A  A  S  L  R  N  A  T  W  L  I  L  P  V  V  I  C  L  S  Q  R  L  S  H  A  C  V  S  M  N  K  F  R  L  *  N  C  E  W  L  I  K  S  V  I  V  C  L  M  V  S  T  T  R  I  T  V  V  I  L  E  L  I  R  A  T  N  P  D  F  W  K  G  C  I  Y  *  I  K  G  R  R  G  L  C  P  L  L  R  *  F  M  I  T  R  R  I  A  R  P  S  C  R  R  R  I  I  Q  I  S  A  L  S  T  F  D  G  R  I  V  A  Y  H  G  G  D  G  *  R  R  I  R  V  R  F  R  R  G  S  L  R  N  G  Y  H  I  Q  G  R  Q  Q  A  R  K  L  P  N  P  D  T  G  R  *  *  Q  *  I  T  I  P  G  S  M  S  L  V  I  G  M  S  T  I  *  I  P  *  R  G  S  I  G  G  Q  V  W  C  Q  Q  P  R  *  F  Q  L  Q  *  R  I  F  K  L  L  Q  L  K  S  S  *  L  D  F  G  M  G  R  P  V  R  P  R  C  A  P  V  V  S  S  L  L  S  A  M  R  S  W  P  *  L  A  G  S  C  L  R  R  C  Y  F  E  E  I  R  V  L  K  A  S  L  R  S  V  Y  I  S  M  G  *  H  Y  R  I  S  V  L  L  R  W  P  S  G  S  E  *  *  L  T  G  T  V  G  G  I  R  I  S  *  S  E  V  K  F  L  D  L  *  K  T  N  N  C  E  S  I  C  Q  G  C  F  H  *  S  R  T  K  V  G  G  S  K  T  I  R  Y  R  P  S  L  N  H  K  R  C  R  P  G  I  G  G  C  C  F  *  D  S  A  G  T  L  *  E  I  K  V  F  G  F  R  G  E  Y  G  R  K  A  E  T  *  R  N  *  R  K  G  T  T  R  S  G  A  C  G  L  I  *  L  N  T  G  K  L  T  R  S  R  H  S  K  D  *  Q  T  E  S  S  F  L  I  L  W  V  V  V  H  G  R  S  *  L  V  E  R  F  V  W  L  I  P  L  T  N  E  T  S  A  C  *  L  A  M  R  R  Y  P  F  A  A  S  F  L  E  G  L  R  P  F  R  P  R  K  F  E  A  I  T  G  L  *  C  P  *  M  F  W  A  A  R  A  L  H  *  C  I  Q  R  A  Y  S  L  G  R  Q  A  R  V  I  F  E  I  S  S  *  W  G  *  I  I  A  I  V  G  L  Q  R  G  I  P  S  K  R  E  S  S  A  R  V  D  Y  V  P  A  L  C  T  H  R  P  S  L  L  P  I  E  *  S  G  E  M  F  G  S  R  R  R  G  R  F  A  A  R  D  V  A  R  S  P  L  N  L  I  I  *  R  K  E  K  S  *  Q  G  F  R  R  *  T  C  G  R  I  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0089P21.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="8381" stop="8659"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>276</number_coding_nucleotides>
                  <number_encoded_amino_acids>92</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NSWIYERRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGSADVAFRTPPAPYEKSKFLGSGGSMVARLKLKGIDGRAPPGVEPAA*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0089P21.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="7329" stop="7577"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>246</number_coding_nucleotides>
                  <number_encoded_amino_acids>82</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TQWAWGLHRLLSAQNECSLRMTAALALDPTVPERARRAHAARGVVEECYLVDPASSHMLVSKIKPCMCKYEQIQTVKLRMAH*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0089P21.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="8096" stop="8338"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>240</number_coding_nucleotides>
                  <number_encoded_amino_acids>80</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KARSWTLGWAGRSALGVHRSSRPFCRRCAPGLNWPGRASGAVTLKKLECSKQAYALYTLAWDNIIGFRSYYVGLRDRSND*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0089P21.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="4"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="7235" stop="7465"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>228</number_coding_nucleotides>
                  <number_encoded_amino_acids>76</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TQKTLSRPTPSLASSCDGVVRERRLEFSDTVDAVGMGPSPASICPKRMLLANDCRARLGPDRARKGAPGSCGARRR*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0089P21.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="5"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="7578" stop="7805"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>225</number_coding_nucleotides>
                  <number_encoded_amino_acids>75</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ISYSLFDGIYYSDNRSNSRANTCNKPRLLEGMHLLDKRSTRALPVAAMIHDNSTDRTAIVPATHHSNFCPINFRW*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0089P21.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="6"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="8996" stop="9211"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>213</number_coding_nucleotides>
                  <number_encoded_amino_acids>71</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SLKFHRDGDRSLQLLVFNEEFLVSASHQLALTTSLPFVHTARRSYRLNDPVKCSDRGDVGGSLPATSREVH*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0089P21.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="7"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="7113" stop="7328"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>213</number_coding_nucleotides>
                  <number_encoded_amino_acids>71</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RMKRNLGWSDVGTSCAAYLLPRHCARANGRLSPLASHARGEPKRRSRVPRLPSLRRAMAWSVSGASNSRIR*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0089P21.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="8"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="6974" stop="7177"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>201</number_coding_nucleotides>
                  <number_encoded_amino_acids>67</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CRAAGWMSGVHFRSYSRTAHEWYWACVVRLDPCFEQRRPNSHANSVTDEAQSRLVGRRNFLCCIPTA*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0089P21.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="9"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="8292" stop="8489"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DFGPITLAFGIGVMINRDSRGHSYFIVRGEILGFMKDEQLRKHLPRMFSLIKNESWGLEDDQIPS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0089P21.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="10"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="6918" stop="7112"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>192</number_coding_nucleotides>
                  <number_encoded_amino_acids>64</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AGVALALQRRHRRRRTTSNVGRRGGCRACISGAIHVRRMSGIGHVWLGWIPASSSDVLTRMPTR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="1490" e_stop="4217"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="1490" e_stop="4217" e_length="2728"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1490" stop="4217"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U581066" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3556" stop="3707"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U591923" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAGGAGTCTGACATGTGTGCGAGTCAACGGGCGAGTAAACCCGTAAGGCGTAAGGAAGCTGATTGGTGGGATCCCCCTGAGGGGTGCACCGCCGACCGACCTTGATCTTCTGAGAAGGGTTCGAGTGTGAGCATACCTGTCGGGACCCGAAAGATGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATACTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGAAAGACTAATCGAACCGTCTAGTAGCTGGTTCCCTCCGAAGTTTCCCTCAGGATAGCTGGAGCTCGCGTGCGAGTTCTATCGGGTAAAGCCAATGATTAGAGGCCTCGGGGGCGCAACGCCCTCGACCTATTCTCAAACTTTAAATAGGTAGGACGGCGCGGCTGCTTTGTTGAGCCGCGCCACGGAATCAAGAGCTCCAAGTGGGCCATTTTTGGTAAGCAGAACTGGCGATGCGGGATGAACCGGAAGCCGGGTTACGGTGCCAAACTGCGCGCTAACCTAGATCCCACAAAGGGTGTTGGTCGATTAAGACAGCAGGACGGTGGTCATGGAAGTCGAAATCCGCTAAGGAGTGTGTAACAACTCACCTGCCGAATCAACTAGCCCCGAAAATGGATGGCGCTTAAGCGCGCGACCTACACCCGGCCGTCGGGGCAAGTGCCAGGCCCCGATGAGTAGGAGGGCGCGGCGGTCGCTGCAAAACCTTGGGCGCGAGCCTGGGCGGAGCGGCCGTCGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGGTTAGTCGATCCTAAGGGTCGGGGGAACCCCGACAGATAGCGCGTTTCGCGCGTACTCCGAAAGGGAATCGGGTTAAAATTCCTGAACCGGGACGTGGCGGTTGACGGCAACGTTAGGAAGTCCGGAGACGTCGGCGGGAGCCTCGGGAAGAGTTATCTTTTCTGTTTAACAGCCTGCCCACCCTGGAATCGGCTCAGCCGGAGGTAGGGTCCAGCGGCTGGAAGAGCACCGCACGTCGCGTGGTGTCCGGTGCGCTCCCGGCGGCCCTTGAAAATCCGGAGGACCGAATGCCGTCCACGCCCGGTCGTACTCATAACCGCATCAGGTCTCCAAGGTGAACAGCCTCTGGTCGATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACTTCGGGAAAAGGATTGGCTCTGAGGGCTGGGCACGGGGGTCCCAGTCCCGAACCCGTCGGCTGTCGGTGGACTGCTCGAGCTGCTCCCGCGGCGAGAGCGGGTCGCCGCGTGCCGGCCGGGGGACGGACTGGGAACGGTTCCTTCGGGGGCCTTCCCCGGGCGTCGAACAGCCAACTCAGAACTGGTACGGACAAGGGGAATCCGACTGTTTAATTAAAACAAAGCATTGCGATGGTCCCAACGGATGTTTACGCAATGTGATTTCTGCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAACCAAGCGCGGGTAAACGGCGGGAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCGTCATCTAATTAGTGACGCGCATGAATGGATTAACGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCAGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGTATAAGTGGGAGCCGAAAGGCGAAAGTGAAATACCACTACTTTTAACGTTATTTTACTTATTCCGTGAATCGGAAGCGGGGCACTGCCCCTCTTTTTGGACCCAAGGCTCGCTTCGCGGGCCGATCCGGGCGGAAGACATTGTCAGGTGGGGAGTTTGGCTGGGGCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAACAGAAATCTCGTGTGGAACAGAAGGGTAAAAGCTCGTTTGATTCTGATTTCCAGTACGAATACGAACCGTGAAAGCGTGGCCTAACGATCCTTTAGACCTTCGGAATTCGAAGCTAGAGGTGTCAGAAAAGTTACCACAGGGATAACTGGCTTGTGGCAGCCAAGCGTTCATAGCGACGTTGCTTTTTGATCCTTCGATGTCGGCTCTTCCTATCATTGTGAAGCAGAATTCACCAAGTGTTGGATTGTTCACCCACCAATAGGGAACGTGAGCTGGGTTTAGACCGTCGTGAGACAGGTTAGTTTTACCCTACTGATGACAGTGTCGCAATAGTAATTCAACCTAGTACGAGAGGAACCGTTGATTCACACAATTGGCCATCGCGCTTGGTTGAAAAGCCAGTGGCGCGAAGCTACCGTGTGCTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTAGAAGCGACGCATGCGCCCGCCGTCCGCTTGCCGACCCGCAGTAGGGGCCTTTGGCCCCCAAGGGCACGTGTCGTTGGCTAAGTCGCCGCGACGGAAGCGTCGCGGTGACCGCCTTGAAGTACAATTTCCATCGAGCGGCGGGTAGAATCCTTTGCAGACGACTTAAATACGCGACGGGGTATTGTAAGTGGCAGAGTGGCCTTGCTGCCACGATCCACTGAGATTCAGCCCTTTGTCGCTCCGATTCGTCCC</gDNA_template>
            <first_frame> K  E  S  D  M  C  A  S  Q  R  A  S  K  P  V  R  R  K  E  A  D  W  W  D  P  P  E  G  C  T  A  D  R  P  *  S  S  E  K  G  S  S  V  S  I  P  V  G  T  R  K  M  V  N  Y  A  *  A  G  R  S  Q  R  K  L  W  W  R  P  A  A  I  L  T  C  K  S  F  V  *  L  G  Y  R  G  E  R  L  I  E  P  S  S  S  W  F  P  P  K  F  P  S  G  *  L  E  L  A  C  E  F  Y  R  V  K  P  M  I  R  G  L  G  G  A  T  P  S  T  Y  S  Q  T  L  N  R  *  D  G  A  A  A  L  L  S  R  A  T  E  S  R  A  P  S  G  P  F  L  V  S  R  T  G  D  A  G  *  T  G  S  R  V  T  V  P  N  C  A  L  T  *  I  P  Q  R  V  L  V  D  *  D  S  R  T  V  V  M  E  V  E  I  R  *  G  V  C  N  N  S  P  A  E  S  T  S  P  E  N  G  W  R  L  S  A  R  P  T  P  G  R  R  G  K  C  Q  A  P  M  S  R  R  A  R  R  S  L  Q  N  L  G  R  E  P  G  R  S  G  R  R  C  R  S  W  W  *  *  Q  I  F  K  *  E  L  *  R  P  K  R  G  K  V  P  C  E  R  H  L  H  M  G  *  S  I  L  R  V  G  G  T  P  T  D  S  A  F  R  A  Y  S  E  R  E  S  G  *  N  S  *  T  G  T  W  R  L  T  A  T  L  G  S  P  E  T  S  A  G  A  S  G  R  V  I  F  S  V  *  Q  P  A  H  P  G  I  G  S  A  G  G  R  V  Q  R  L  E  E  H  R  T  S  R  G  V  R  C  A  P  G  G  P  *  K  S  G  G  P  N  A  V  H  A  R  S  Y  S  *  P  H  Q  V  S  K  V  N  S  L  W  S  M  E  Q  C  R  Q  G  K  S  A  K  W  I  R  N  F  G  K  R  I  G  S  E  G  W  A  R  G  S  Q  S  R  T  R  R  L  S  V  D  C  S  S  C  S  R  G  E  S  G  S  P  R  A  G  R  G  T  D  W  E  R  F  L  R  G  P  S  P  G  V  E  Q  P  T  Q  N  W  Y  G  Q  G  E  S  D  C  L  I  K  T  K  H  C  D  G  P  N  G  C  L  R  N  V  I  S  A  Q  C  S  E  C  Q  S  E  E  I  Q  P  S  A  G  K  R  R  E  *  L  *  L  S  *  G  S  Q  M  P  R  H  L  I  S  D  A  H  E  W  I  N  E  I  P  T  V  P  V  Y  Y  P  A  K  P  Q  P  R  E  R  A  W  Q  N  Q  R  G  K  K  T  L  L  S  L  T  L  V  R  L  C  E  M  T  *  E  V  *  Y  K  W  E  P  K  G  E  S  E  I  P  L  L  L  T  L  F  Y  L  F  R  E  S  E  A  G  H  C  P  S  F  W  T  Q  G  S  L  R  G  P  I  R  A  E  D  I  V  R  W  G  V  W  L  G  R  H  I  C  *  K  I  T  Q  V  S  *  D  E  L  N  E  N  R  N  L  V  W  N  R  R  V  K  A  R  L  I  L  I  S  S  T  N  T  N  R  E  S  V  A  *  R  S  F  R  P  S  E  F  E  A  R  G  V  R  K  V  T  T  G  I  T  G  L  W  Q  P  S  V  H  S  D  V  A  F  *  S  F  D  V  G  S  S  Y  H  C  E  A  E  F  T  K  C  W  I  V  H  P  P  I  G  N  V  S  W  V  *  T  V  V  R  Q  V  S  F  T  L  L  M  T  V  S  Q  *  *  F  N  L  V  R  E  E  P  L  I  H  T  I  G  H  R  A  W  L  K  S  Q  W  R  E  A  T  V  C  W  I  M  T  E  R  L  *  V  R  I  R  A  R  S  D  A  C  A  R  R  P  L  A  D  P  Q  *  G  P  L  A  P  K  G  T  C  R  W  L  S  R  R  D  G  S  V  A  V  T  A  L  K  Y  N  F  H  R  A  A  G  R  I  L  C  R  R  L  K  Y  A  T  G  Y  C  K  W  Q  S  G  L  A  A  T  I  H  *  D  S  A  L  C  R  S  D  S  S  </first_frame>
            <second_frame>  R  S  L  T  C  V  R  V  N  G  R  V  N  P  *  G  V  R  K  L  I  G  G  I  P  L  R  G  A  P  P  T  D  L  D  L  L  R  R  V  R  V  *  A  Y  L  S  G  P  E  R  W  *  T  M  P  E  R  G  E  A  R  G  N  S  G  G  G  P  Q  R  Y  *  R  A  N  R  S  S  D  L  G  I  G  A  K  D  *  S  N  R  L  V  A  G  S  L  R  S  F  P  Q  D  S  W  S  S  R  A  S  S  I  G  *  S  Q  *  L  E  A  S  G  A  Q  R  P  R  P  I  L  K  L  *  I  G  R  T  A  R  L  L  C  *  A  A  P  R  N  Q  E  L  Q  V  G  H  F  W  *  A  E  L  A  M  R  D  E  P  E  A  G  L  R  C  Q  T  A  R  *  P  R  S  H  K  G  C  W  S  I  K  T  A  G  R  W  S  W  K  S  K  S  A  K  E  C  V  T  T  H  L  P  N  Q  L  A  P  K  M  D  G  A  *  A  R  D  L  H  P  A  V  G  A  S  A  R  P  R  *  V  G  G  R  G  G  R  C  K  T  L  G  A  S  L  G  G  A  A  V  G  A  D  L  G  G  S  S  K  Y  S  N  E  N  F  E  G  R  R  G  E  R  F  H  V  N  G  T  C  T  W  V  S  R  S  *  G  S  G  E  P  R  Q  I  A  R  F  A  R  T  P  K  G  N  R  V  K  I  P  E  P  G  R  G  G  *  R  Q  R  *  E  V  R  R  R  R  R  E  P  R  E  E  L  S  F  L  F  N  S  L  P  T  L  E  S  A  Q  P  E  V  G  S  S  G  W  K  S  T  A  R  R  V  V  S  G  A  L  P  A  A  L  E  N  P  E  D  R  M  P  S  T  P  G  R  T  H  N  R  I  R  S  P  R  *  T  A  S  G  R  W  N  N  V  G  K  G  S  R  Q  N  G  S  V  T  S  G  K  G  L  A  L  R  A  G  H  G  G  P  S  P  E  P  V  G  C  R  W  T  A  R  A  A  P  A  A  R  A  G  R  R  V  P  A  G  G  R  T  G  N  G  S  F  G  G  L  P  R  A  S  N  S  Q  L  R  T  G  T  D  K  G  N  P  T  V  *  L  K  Q  S  I  A  M  V  P  T  D  V  Y  A  M  *  F  L  P  S  A  L  N  V  K  V  K  K  F  N  Q  A  R  V  N  G  G  S  N  Y  D  S  L  K  V  A  K  C  L  V  I  *  L  V  T  R  M  N  G  L  T  R  F  P  L  S  L  S  T  I  Q  R  N  H  S  Q  G  N  G  L  G  R  I  S  G  E  R  R  P  C  *  A  *  L  *  S  D  F  V  K  *  L  E  R  C  S  I  S  G  S  R  K  A  K  V  K  Y  H  Y  F  *  R  Y  F  T  Y  S  V  N  R  K  R  G  T  A  P  L  F  G  P  K  A  R  F  A  G  R  S  G  R  K  T  L  S  G  G  E  F  G  W  G  G  T  S  V  K  R  *  R  R  C  P  K  M  S  S  T  R  T  E  I  S  C  G  T  E  G  *  K  L  V  *  F  *  F  P  V  R  I  R  T  V  K  A  W  P  N  D  P  L  D  L  R  N  S  K  L  E  V  S  E  K  L  P  Q  G  *  L  A  C  G  S  Q  A  F  I  A  T  L  L  F  D  P  S  M  S  A  L  P  I  I  V  K  Q  N  S  P  S  V  G  L  F  T  H  Q  *  G  T  *  A  G  F  R  P  S  *  D  R  L  V  L  P  Y  *  *  Q  C  R  N  S  N  S  T  *  Y  E  R  N  R  *  F  T  Q  L  A  I  A  L  G  *  K  A  S  G  A  K  L  P  C  A  G  L  *  L  N  A  S  K  S  E  S  G  L  E  A  T  H  A  P  A  V  R  L  P  T  R  S  R  G  L  W  P  P  R  A  R  V  V  G  *  V  A  A  T  E  A  S  R  *  P  P  *  S  T  I  S  I  E  R  R  V  E  S  F  A  D  D  L  N  T  R  R  G  I  V  S  G  R  V  A  L  L  P  R  S  T  E  I  Q  P  F  V  A  P  I  R  P </second_frame>
            <third_frame>   G  V  *  H  V  C  E  S  T  G  E  *  T  R  K  A  *  G  S  *  L  V  G  S  P  *  G  V  H  R  R  P  T  L  I  F  *  E  G  F  E  C  E  H  T  C  R  D  P  K  D  G  E  L  C  L  S  G  A  K  P  E  E  T  L  V  E  A  R  S  D  T  D  V  Q  I  V  R  L  T  W  V  *  G  R  K  T  N  R  T  V  *  *  L  V  P  S  E  V  S  L  R  I  A  G  A  R  V  R  V  L  S  G  K  A  N  D  *  R  P  R  G  R  N  A  L  D  L  F  S  N  F  K  *  V  G  R  R  G  C  F  V  E  P  R  H  G  I  K  S  S  K  W  A  I  F  G  K  Q  N  W  R  C  G  M  N  R  K  P  G  Y  G  A  K  L  R  A  N  L  D  P  T  K  G  V  G  R  L  R  Q  Q  D  G  G  H  G  S  R  N  P  L  R  S  V  *  Q  L  T  C  R  I  N  *  P  R  K  W  M  A  L  K  R  A  T  Y  T  R  P  S  G  Q  V  P  G  P  D  E  *  E  G  A  A  V  A  A  K  P  W  A  R  A  W  A  E  R  P  S  V  Q  I  L  V  V  V  A  N  I  Q  M  R  T  L  K  A  E  E  G  K  G  S  M  *  T  A  L  A  H  G  L  V  D  P  K  G  R  G  N  P  D  R  *  R  V  S  R  V  L  R  K  G  I  G  L  K  F  L  N  R  D  V  A  V  D  G  N  V  R  K  S  G  D  V  G  G  S  L  G  K  S  Y  L  F  C  L  T  A  C  P  P  W  N  R  L  S  R  R  *  G  P  A  A  G  R  A  P  H  V  A  W  C  P  V  R  S  R  R  P  L  K  I  R  R  T  E  C  R  P  R  P  V  V  L  I  T  A  S  G  L  Q  G  E  Q  P  L  V  D  G  T  M  *  A  R  E  V  G  K  M  D  P  *  L  R  E  K  D  W  L  *  G  L  G  T  G  V  P  V  P  N  P  S  A  V  G  G  L  L  E  L  L  P  R  R  E  R  V  A  A  C  R  P  G  D  G  L  G  T  V  P  S  G  A  F  P  G  R  R  T  A  N  S  E  L  V  R  T  R  G  I  R  L  F  N  *  N  K  A  L  R  W  S  Q  R  M  F  T  Q  C  D  F  C  P  V  L  *  M  S  K  *  R  N  S  T  K  R  G  *  T  A  G  V  T  M  T  L  L  R  *  P  N  A  S  S  S  N  *  *  R  A  *  M  D  *  R  D  S  H  C  P  C  L  L  S  S  E  T  T  A  K  G  T  G  L  A  E  S  A  G  K  E  D  P  V  E  L  D  S  S  P  T  L  *  N  D  L  R  G  V  V  *  V  G  A  E  R  R  K  *  N  T  T  T  F  N  V  I  L  L  I  P  *  I  G  S  G  A  L  P  L  F  L  D  P  R  L  A  S  R  A  D  P  G  G  R  H  C  Q  V  G  S  L  A  G  A  A  H  L  L  K  D  N  A  G  V  L  R  *  A  Q  R  E  Q  K  S  R  V  E  Q  K  G  K  S  S  F  D  S  D  F  Q  Y  E  Y  E  P  *  K  R  G  L  T  I  L  *  T  F  G  I  R  S  *  R  C  Q  K  S  Y  H  R  D  N  W  L  V  A  A  K  R  S  *  R  R  C  F  L  I  L  R  C  R  L  F  L  S  L  *  S  R  I  H  Q  V  L  D  C  S  P  T  N  R  E  R  E  L  G  L  D  R  R  E  T  G  *  F  Y  P  T  D  D  S  V  A  I  V  I  Q  P  S  T  R  G  T  V  D  S  H  N  W  P  S  R  L  V  E  K  P  V  A  R  S  Y  R  V  L  D  Y  D  *  T  P  L  S  Q  N  P  G  *  K  R  R  M  R  P  P  S  A  C  R  P  A  V  G  A  F  G  P  Q  G  H  V  S  L  A  K  S  P  R  R  K  R  R  G  D  R  L  E  V  Q  F  P  S  S  G  G  *  N  P  L  Q  T  T  *  I  R  D  G  V  L  *  V  A  E  W  P  C  C  H  D  P  L  R  F  S  P  L  S  L  R  F  V   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0089P21.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="2672" stop="3082"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>408</number_coding_nucleotides>
                  <number_encoded_amino_acids>136</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PHQVSKVNSLWSMEQCRQGKSAKWIRNFGKRIGSEGWARGSQSRTRRLSVDCSSCSRGESGSPRAGRGTDWERFLRGPSPGVEQPTQNWYGQGESDCLIKTKHCDGPNGCLRNVISAQCSECQSEEIQPSAGKRRE*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0089P21.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="2472" stop="2693"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>219</number_coding_nucleotides>
                  <number_encoded_amino_acids>73</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EVRRRRREPREELSFLFNSLPTLESAQPEVGSSGWKSTARRVVSGALPAALENPEDRMPSTPGRTHNRIRSPR*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0089P21.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="2" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="1894" stop="2106"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VGRRGCFVEPRHGIKSSKWAIFGKQNWRCGMNRKPGYGAKLRANLDPTKGVGRLRQQDGGHGSRNPLRSV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="9879" e_stop="10209"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.946"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.946">
            <gDNA_exon_boundary e_start="9879" e_stop="10209" e_length="331"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9879" stop="10209"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U592501" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACCGCGACCCCAGGTCAGGCGGGATTACCCGCTGAGTTTAAGCATATCAATAAGCGGAGGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAACAGCCCAGCCTTAGAATCGGGCGGCTCCGTCGTCCGAATTGTAGTCTGGAGAAGCGTCCTCAGCGGCGGACCGGGCCCAAGTCCCCTGGAAGGGGGCGCCGGAGAGGGTGAGAGCCCCGTCGTGCCCGGACCCTGTCGCACCACGAGGCGCTGTCTACGAGTCGGGTTGTTTGGGAATGCAGCCCAAATCGGGCGGTGAATTCCGTCCAAGGCTAAATACTGG</gDNA_template>
            <first_frame> T  A  T  P  G  Q  A  G  L  P  A  E  F  K  H  I  N  K  R  R  K  R  N  L  Q  G  F  P  *  *  R  R  A  N  R  E  Q  P  S  L  R  I  G  R  L  R  R  P  N  C  S  L  E  K  R  P  Q  R  R  T  G  P  K  S  P  G  R  G  R  R  R  G  *  E  P  R  R  A  R  T  L  S  H  H  E  A  L  S  T  S  R  V  V  W  E  C  S  P  N  R  A  V  N  S  V  Q  G  *  I  L  </first_frame>
            <second_frame>  P  R  P  Q  V  R  R  D  Y  P  L  S  L  S  I  S  I  S  G  G  K  E  T  Y  K  D  S  P  S  N  G  E  R  T  G  N  S  P  A  L  E  S  G  G  S  V  V  R  I  V  V  W  R  S  V  L  S  G  G  P  G  P  S  P  L  E  G  G  A  G  E  G  E  S  P  V  V  P  G  P  C  R  T  T  R  R  C  L  R  V  G  L  F  G  N  A  A  Q  I  G  R  *  I  P  S  K  A  K  Y  W </second_frame>
            <third_frame>   R  D  P  R  S  G  G  I  T  R  *  V  *  A  Y  Q  *  A  E  E  K  K  L  T  R  I  P  L  V  T  A  S  E  P  G  T  A  Q  P  *  N  R  A  A  P  S  S  E  L  *  S  G  E  A  S  S  A  A  D  R  A  Q  V  P  W  K  G  A  P  E  R  V  R  A  P  S  C  P  D  P  V  A  P  R  G  A  V  Y  E  S  G  C  L  G  M  Q  P  K  S  G  G  E  F  R  P  R  L  N  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0089P21.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="9880" stop="10185"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>303</number_coding_nucleotides>
                  <number_encoded_amino_acids>101</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PRPQVRRDYPLSLSISISGGKETYKDSPSNGERTGNSPALESGGSVVRIVVWRSVLSGGPGPSPLEGGAGEGESPVVPGPCRTTRRCLRVGLFGNAAQIGR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="5546" e_stop="6219"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.991"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.991">
            <gDNA_exon_boundary e_start="5546" e_stop="6219" e_length="674"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="5546" stop="6219"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U600447" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="4" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CGATATTTTCCCTATTTTTTATTAATTTATTACTAATTTTTTGGAATTTTTGAAAAAAATAAAAATCAAAAAAAATTGTTGAAAAATATTTTTTTATACATATTAAAGTCAATTATGAAGGCTGATGTGTGTTTGTACCTTAGACCGCGCATATTTGGGTTGTACATTTTCATTATGATTCTCTGGAAAATCCATGTCTACTCCTGTCACATGGGCAAAACTTTTTTAAGCATATATAAGGGGGGTAGAGGTGTTGGAGGCAGACTGAGGCGCAGGCAGGCAGACGGCATAGGCGTCCCGTGGGCTTAGCAGGCGTGCTGCGTGGGCGCTTGATGGCATGCATGGCTTGTCCGTGCTACGCCGTTGGGCGTTTACAAAAACACGTCGGCGACGTCGACGGGTCGAGTGGGCAACGGCAGGCGGACGCCGAGGGCGTCCTGTGGGCTTAGTAGGCGTGCTGCGTGGGCGCTTGATGGCATGCATGGCTCGTCCGTGCTACGTCGTTGGGCGTCTACAAAAACATGCTAGCGACGTTTGCGGGGCAACTGAAGCGAAGGCAGGCGGACGTCGAGGGCGTCCTGTGGGCTTAGTAGGCGTGCTGCGTGGGCGCTTGACGGCATGCATGGCTCGTCCGTGCTACGCCGTTGGGCGTTTACAAAAACACGCCCGCGACG</gDNA_template>
            <first_frame> R  Y  F  P  Y  F  L  L  I  Y  Y  *  F  F  G  I  F  E  K  N  K  N  Q  K  K  L  L  K  N  I  F  L  Y  I  L  K  S  I  M  K  A  D  V  C  L  Y  L  R  P  R  I  F  G  L  Y  I  F  I  M  I  L  W  K  I  H  V  Y  S  C  H  M  G  K  T  F  L  S  I  Y  K  G  G  R  G  V  G  G  R  L  R  R  R  Q  A  D  G  I  G  V  P  W  A  *  Q  A  C  C  V  G  A  *  W  H  A  W  L  V  R  A  T  P  L  G  V  Y  K  N  T  S  A  T  S  T  G  R  V  G  N  G  R  R  T  P  R  A  S  C  G  L  S  R  R  A  A  W  A  L  D  G  M  H  G  S  S  V  L  R  R  W  A  S  T  K  T  C  *  R  R  L  R  G  N  *  S  E  G  R  R  T  S  R  A  S  C  G  L  S  R  R  A  A  W  A  L  D  G  M  H  G  S  S  V  L  R  R  W  A  F  T  K  T  R  P  R   </first_frame>
            <second_frame>  D  I  F  P  I  F  Y  *  F  I  T  N  F  L  E  F  L  K  K  I  K  I  K  K  N  C  *  K  I  F  F  Y  T  Y  *  S  Q  L  *  R  L  M  C  V  C  T  L  D  R  A  Y  L  G  C  T  F  S  L  *  F  S  G  K  S  M  S  T  P  V  T  W  A  K  L  F  *  A  Y  I  R  G  V  E  V  L  E  A  D  *  G  A  G  R  Q  T  A  *  A  S  R  G  L  S  R  R  A  A  W  A  L  D  G  M  H  G  L  S  V  L  R  R  W  A  F  T  K  T  R  R  R  R  R  R  V  E  W  A  T  A  G  G  R  R  G  R  P  V  G  L  V  G  V  L  R  G  R  L  M  A  C  M  A  R  P  C  Y  V  V  G  R  L  Q  K  H  A  S  D  V  C  G  A  T  E  A  K  A  G  G  R  R  G  R  P  V  G  L  V  G  V  L  R  G  R  L  T  A  C  M  A  R  P  C  Y  A  V  G  R  L  Q  K  H  A  R  D  </second_frame>
            <third_frame>   I  F  S  L  F  F  I  N  L  L  L  I  F  W  N  F  *  K  K  *  K  S  K  K  I  V  E  K  Y  F  F  I  H  I  K  V  N  Y  E  G  *  C  V  F  V  P  *  T  A  H  I  W  V  V  H  F  H  Y  D  S  L  E  N  P  C  L  L  L  S  H  G  Q  N  F  F  K  H  I  *  G  G  *  R  C  W  R  Q  T  E  A  Q  A  G  R  R  H  R  R  P  V  G  L  A  G  V  L  R  G  R  L  M  A  C  M  A  C  P  C  Y  A  V  G  R  L  Q  K  H  V  G  D  V  D  G  S  S  G  Q  R  Q  A  D  A  E  G  V  L  W  A  *  *  A  C  C  V  G  A  *  W  H  A  W  L  V  R  A  T  S  L  G  V  Y  K  N  M  L  A  T  F  A  G  Q  L  K  R  R  Q  A  D  V  E  G  V  L  W  A  *  *  A  C  C  V  G  A  *  R  H  A  W  L  V  R  A  T  P  L  G  V  Y  K  N  T  P  A  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0089P21.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="5838" stop="6218"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>381</number_coding_nucleotides>
                  <number_encoded_amino_acids>127</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ASRGLSRRAAWALDGMHGLSVLRRWAFTKTRRRRRRVEWATAGGRRGRPVGLVGVLRGRLMACMARPCYVVGRLQKHASDVCGATEAKAGGRRGRPVGLVGVLRGRLTACMARPCYAVGRLQKHARD</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0089P21.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="4" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="5582" stop="5854"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>270</number_coding_nucleotides>
                  <number_encoded_amino_acids>90</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FFGIFEKNKNQKKLLKNIFLYILKSIMKADVCLYLRPRIFGLYIFIMILWKIHVYSCHMGKTFLSIYKGGRGVGGRLRRRQADGIGVPWA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="5">
          <exon_coordinates>
            <exon e_start="3061" e_stop="3410"/>
            <exon e_start="10799" e_stop="11102"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.980"/>
          <exon-only e_score="0.990"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.980">
            <gDNA_exon_boundary e_start="3061" e_stop="3410" e_length="350"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="3411" i_stop="10798" i_length="7388"/>
          </intron>
          <exon e_serial="2" e_score="0.990">
            <gDNA_exon_boundary e_start="10799" e_stop="11102" e_length="304"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3061" stop="3410"/>
              <exon start="10799" stop="11102"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U590622" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="5" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CGCGGGTAAACGGCGGGAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCGTCATCTAATTAGTGACGCGCATGAATGGATTAACGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCAGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGTATAAGTGGGAGCCGAAAGGCGAAAGTGAAATACCACTACTTTTAACGTTATTTTACTTATTCCGTGAATCGGAAGCGGGGCACTGCCCCTCTTTTTGGACCCAAGGCTCGCTTCGCGGGCCGATCC : GGGCGAAAGACTAATCGAACCGTCTAGTAGCTGGTTCCCTCCGAAGTTTCCCTCAGGATAGCTGGAGCTCGCGTGCGAGTTCTATCGGGTAAAGCCAATGATTAGAGGCCTCGGGCGCGCAACGCCCTCGACCTATTCTCAAACTTTAAATAGGTAGGACGGCGCGGCTGCTTTGTTGAGCCGCGCCACGGAATCAAGAGCTCCAAGTGGGCCATTTTTGGTAAGCAGAACTGGCGATGCGGGATGAACCGGAAGCCGGGTTACGGTGCCAAACTGCGCGCTAACCTAGATCCCACAAAGGGTG</gDNA_template>
            <first_frame> R  G  *  T  A  G  V  T  M  T  L  L  R  *  P  N  A  S  S  S  N  *  *  R  A  *  M  D  *  R  D  S  H  C  P  C  L  L  S  S  E  T  T  A  K  G  T  G  L  A  E  S  A  G  K  E  D  P  V  E  L  D  S  S  P  T  L  *  N  D  L  R  G  V  V  *  V  G  A  E  R  R  K  *  N  T  T  T  F  N  V  I  L  L  I  P  *  I  G  S  G  A  L  P  L  F  L  D  P  R  L  A  S  R  A  D  P :   G  E  R  L  I  E  P  S  S  S  W  F  P  P  K  F  P  S  G  *  L  E  L  A  C  E  F  Y  R  V  K  P  M  I  R  G  L  G  R  A  T  P  S  T  Y  S  Q  T  L  N  R  *  D  G  A  A  A  L  L  S  R  A  T  E  S  R  A  P  S  G  P  F  L  V  S  R  T  G  D  A  G  *  T  G  S  R  V  T  V  P  N  C  A  L  T  *  I  P  Q  R  V </first_frame>
            <second_frame>  A  G  K  R  R  E  *  L  *  L  S  *  G  S  Q  M  P  R  H  L  I  S  D  A  H  E  W  I  N  E  I  P  T  V  P  V  Y  Y  P  A  K  P  Q  P  R  E  R  A  W  Q  N  Q  R  G  K  K  T  L  L  S  L  T  L  V  R  L  C  E  M  T  *  E  V  *  Y  K  W  E  P  K  G  E  S  E  I  P  L  L  L  T  L  F  Y  L  F  R  E  S  E  A  G  H  C  P  S  F  W  T  Q  G  S  L  R  G  P  I   : R  A  K  D  *  S  N  R  L  V  A  G  S  L  R  S  F  P  Q  D  S  W  S  S  R  A  S  S  I  G  *  S  Q  *  L  E  A  S  G  A  Q  R  P  R  P  I  L  K  L  *  I  G  R  T  A  R  L  L  C  *  A  A  P  R  N  Q  E  L  Q  V  G  H  F  W  *  A  E  L  A  M  R  D  E  P  E  A  G  L  R  C  Q  T  A  R  *  P  R  S  H  K  G   </second_frame>
            <third_frame>   R  V  N  G  G  S  N  Y  D  S  L  K  V  A  K  C  L  V  I  *  L  V  T  R  M  N  G  L  T  R  F  P  L  S  L  S  T  I  Q  R  N  H  S  Q  G  N  G  L  G  R  I  S  G  E  R  R  P  C  *  A  *  L  *  S  D  F  V  K  *  L  E  R  C  S  I  S  G  S  R  K  A  K  V  K  Y  H  Y  F  *  R  Y  F  T  Y  S  V  N  R  K  R  G  T  A  P  L  F  G  P  K  A  R  F  A  G  R  S  :  G  R  K  T  N  R  T  V  *  *  L  V  P  S  E  V  S  L  R  I  A  G  A  R  V  R  V  L  S  G  K  A  N  D  *  R  P  R  A  R  N  A  L  D  L  F  S  N  F  K  *  V  G  R  R  G  C  F  V  E  P  R  H  G  I  K  S  S  K  W  A  I  F  G  K  Q  N  W  R  C  G  M  N  R  K  P  G  Y  G  A  K  L  R  A  N  L  D  P  T  K  G  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLe0089P21.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="6">
          <exon_coordinates>
            <exon e_start="1965" e_stop="2474"/>
            <exon e_start="10751" e_stop="11000"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.988"/>
          <exon-only e_score="0.964"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.988">
            <gDNA_exon_boundary e_start="1965" e_stop="2474" e_length="510"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="2475" i_stop="10750" i_length="8276"/>
          </intron>
          <exon e_serial="2" e_score="0.964">
            <gDNA_exon_boundary e_start="10751" e_stop="11000" e_length="250"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1965" stop="2474"/>
              <exon start="10751" stop="11000"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U592384" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="6" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCAGAACTGGCGATGCGGGATGAACCGGAAGCCGGGTTACGGTGCCAAACTGCGCGCTAACCTAGATCCCACAAAGGGTGTTGGTCGATTAAGACAGCAGGACGGTGGTCATGGAAGTCGAAATCCGCTAAGGAGTGTGTAACAACTCACCTGCCGAATCAACTAGCCCCGAAAATGGATGGCGCTTAAGCGCGCGACCTACACCCGGCCGTCGGGGCAAGTGCCAGGCCCCGATGAGTAGGAGGGCGCGGCGGTCGCTGCAAAACCTTGGGCGCGAGCCTGGGCGGAGCGGCCGTCGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGGTTAGTCGATCCTAAGGGTCGGGGGAACCCCGACAGATAGCGCGTTTCGCGCGTACTCCGAAAGGGAATCGGGTTAAAATTCCTGAACCGGGACGTGGCGGTTGACGGCAACGTTAGGAA : GCCCGCAGCGATACTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGAAAGACTAATCGAACCGTCTAGTAGCTGGTTCCCTCCGAAGTTTCCCTCAGGATAGCTGGAGCTCGCGTGCGAGTTCTATCGGGTAAAGCCAATGATTAGAGGCCTCGGGCGCGCAACGCCCTCGACCTATTCTCAAACTTTAAATAGGTAGGACGGCGCGGCTGCTTTGTTGAGCCGCGCCACGGAATCAAGAGCT</gDNA_template>
            <first_frame> A  E  L  A  M  R  D  E  P  E  A  G  L  R  C  Q  T  A  R  *  P  R  S  H  K  G  C  W  S  I  K  T  A  G  R  W  S  W  K  S  K  S  A  K  E  C  V  T  T  H  L  P  N  Q  L  A  P  K  M  D  G  A  *  A  R  D  L  H  P  A  V  G  A  S  A  R  P  R  *  V  G  G  R  G  G  R  C  K  T  L  G  A  S  L  G  G  A  A  V  G  A  D  L  G  G  S  S  K  Y  S  N  E  N  F  E  G  R  R  G  E  R  F  H  V  N  G  T  C  T  W  V  S  R  S  *  G  S  G  E  P  R  Q  I  A  R  F  A  R  T  P  K  G  N  R  V  K  I  P  E  P  G  R  G  G  *  R  Q  R  *  E  :  A  R  S  D  T  D  V  Q  I  V  R  L  T  W  V  *  G  R  K  T  N  R  T  V  *  *  L  V  P  S  E  V  S  L  R  I  A  G  A  R  V  R  V  L  S  G  K  A  N  D  *  R  P  R  A  R  N  A  L  D  L  F  S  N  F  K  *  V  G  R  R  G  C  F  V  E  P  R  H  G  I  K  S  </first_frame>
            <second_frame>  Q  N  W  R  C  G  M  N  R  K  P  G  Y  G  A  K  L  R  A  N  L  D  P  T  K  G  V  G  R  L  R  Q  Q  D  G  G  H  G  S  R  N  P  L  R  S  V  *  Q  L  T  C  R  I  N  *  P  R  K  W  M  A  L  K  R  A  T  Y  T  R  P  S  G  Q  V  P  G  P  D  E  *  E  G  A  A  V  A  A  K  P  W  A  R  A  W  A  E  R  P  S  V  Q  I  L  V  V  V  A  N  I  Q  M  R  T  L  K  A  E  E  G  K  G  S  M  *  T  A  L  A  H  G  L  V  D  P  K  G  R  G  N  P  D  R  *  R  V  S  R  V  L  R  K  G  I  G  L  K  F  L  N  R  D  V  A  V  D  G  N  V  R  K :   P  A  A  I  L  T  C  K  S  F  V  *  L  G  Y  R  G  E  R  L  I  E  P  S  S  S  W  F  P  P  K  F  P  S  G  *  L  E  L  A  C  E  F  Y  R  V  K  P  M  I  R  G  L  G  R  A  T  P  S  T  Y  S  Q  T  L  N  R  *  D  G  A  A  A  L  L  S  R  A  T  E  S  R  A </second_frame>
            <third_frame>   R  T  G  D  A  G  *  T  G  S  R  V  T  V  P  N  C  A  L  T  *  I  P  Q  R  V  L  V  D  *  D  S  R  T  V  V  M  E  V  E  I  R  *  G  V  C  N  N  S  P  A  E  S  T  S  P  E  N  G  W  R  L  S  A  R  P  T  P  G  R  R  G  K  C  Q  A  P  M  S  R  R  A  R  R  S  L  Q  N  L  G  R  E  P  G  R  S  G  R  R  C  R  S  W  W  *  *  Q  I  F  K  *  E  L  *  R  P  K  R  G  K  V  P  C  E  R  H  L  H  M  G  *  S  I  L  R  V  G  G  T  P  T  D  S  A  F  R  A  Y  S  E  R  E  S  G  *  N  S  *  T  G  T  W  R  L  T  A  T  L  G   : S  P  Q  R  Y  *  R  A  N  R  S  S  D  L  G  I  G  A  K  D  *  S  N  R  L  V  A  G  S  L  R  S  F  P  Q  D  S  W  S  S  R  A  S  S  I  G  *  S  Q  *  L  E  A  S  G  A  Q  R  P  R  P  I  L  K  L  *  I  G  R  T  A  R  L  L  C  *  A  A  P  R  N  Q  E   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLe0089P21.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="5226" PGL_stop="4230"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="5226" e_stop="4759"/>
            <exon e_start="4652" e_stop="4230"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.991"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.991">
            <gDNA_exon_boundary e_start="5226" e_stop="4759" e_length="468"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="4758" i_stop="4653" i_length="106"/>
          </intron>
          <exon e_serial="2" e_score="0.998">
            <gDNA_exon_boundary e_start="4652" e_stop="4230" e_length="423"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="5226" stop="4759"/>
              <exon start="4652" stop="4230"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U582171" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TATGTTTGTTATGCATGGAGGTTGTTTCAAAATCCTTTGATTTATGTACGCCATGAACATCCGCATGTTTTGTTTGGAACTCGATGAATGTTGCGCAAGCCACGACCGATGCGGGCAGGCCACGGCCGACCGTTGTGTGCAGGCACGTCCGACGACGGCCGACCGTTTGTGCTGTCCAAGGGCTATGATGGCATGCCACGCCCGACGACGGCCGACCGTCTATGCTGTCAAAGGGCGAAGATGGCATGCCACGCCCGACGACGGCCGACCGTCTATGCTGTCAAAGGGCGAAGATGGCATGCCACGCCCGACGTCGTTCGACCGTGTGTGCTGCAAAAAGGCGAAGATGGCATGCCACGCCAGACGCCGTTCGACCGTGTGTGCCCAAAGGCGATGATGGCATGCCACGCCCGACGTCGCTCGACCGTGTGTGCTGCCCAAAGGCGATGGTGGCATGCCACGCCCGAC : GTCGTTCGACCGTGTGTGCTGCCCAAAGGCGTATTTTGCAGTCCACGCCCGTTCGGCGCAGGCCTTTGCAGATGCCGCCTGGCCGCGGACGTGCTGCGTACGCAGACCCATTTGCCCCTTGACATCTAACTTGGCTTTAATAATCGCACCCGACATCCCGAAAACCTCTTACAGTGACATGTCATTAGTCCCTTAACATGTCATTAGGCTTGATAAATGAACTCAACTTCACGAAAAACTCGCAATGGGGCTCAGAACGCATAGCTCAACACTTAGCGGCAGACTAGTGAACTTCACTTGCCGTGTTACTTTTGAAACTTATATTTCAACACTTAGTTATTTTTTCCTCTTCGAAGGATGCAGGCAGCACGCGAACCTCACATTTGAAAAGTTAGAAATGATTGGATTTGATTTTGGGGGAGG</gDNA_template>
            <first_frame> Y  V  C  Y  A  W  R  L  F  Q  N  P  L  I  Y  V  R  H  E  H  P  H  V  L  F  G  T  R  *  M  L  R  K  P  R  P  M  R  A  G  H  G  R  P  L  C  A  G  T  S  D  D  G  R  P  F  V  L  S  K  G  Y  D  G  M  P  R  P  T  T  A  D  R  L  C  C  Q  R  A  K  M  A  C  H  A  R  R  R  P  T  V  Y  A  V  K  G  R  R  W  H  A  T  P  D  V  V  R  P  C  V  L  Q  K  G  E  D  G  M  P  R  Q  T  P  F  D  R  V  C  P  K  A  M  M  A  C  H  A  R  R  R  S  T  V  C  A  A  Q  R  R  W  W  H  A  T  P  D  :  V  V  R  P  C  V  L  P  K  G  V  F  C  S  P  R  P  F  G  A  G  L  C  R  C  R  L  A  A  D  V  L  R  T  Q  T  H  L  P  L  D  I  *  L  G  F  N  N  R  T  R  H  P  E  N  L  L  Q  *  H  V  I  S  P  L  T  C  H  *  A  *  *  M  N  S  T  S  R  K  T  R  N  G  A  Q  N  A  *  L  N  T  *  R  Q  T  S  E  L  H  L  P  C  Y  F  *  N  L  Y  F  N  T  *  L  F  F  P  L  R  R  M  Q  A  A  R  E  P  H  I  *  K  V  R  N  D  W  I  *  F  W  G  R </first_frame>
            <second_frame>  M  F  V  M  H  G  G  C  F  K  I  L  *  F  M  Y  A  M  N  I  R  M  F  C  L  E  L  D  E  C  C  A  S  H  D  R  C  G  Q  A  T  A  D  R  C  V  Q  A  R  P  T  T  A  D  R  L  C  C  P  R  A  M  M  A  C  H  A  R  R  R  P  T  V  Y  A  V  K  G  R  R  W  H  A  T  P  D  D  G  R  P  S  M  L  S  K  G  E  D  G  M  P  R  P  T  S  F  D  R  V  C  C  K  K  A  K  M  A  C  H  A  R  R  R  S  T  V  C  A  Q  R  R  *  W  H  A  T  P  D  V  A  R  P  C  V  L  P  K  G  D  G  G  M  P  R  P  T :   S  F  D  R  V  C  C  P  K  A  Y  F  A  V  H  A  R  S  A  Q  A  F  A  D  A  A  W  P  R  T  C  C  V  R  R  P  I  C  P  L  T  S  N  L  A  L  I  I  A  P  D  I  P  K  T  S  Y  S  D  M  S  L  V  P  *  H  V  I  R  L  D  K  *  T  Q  L  H  E  K  L  A  M  G  L  R  T  H  S  S  T  L  S  G  R  L  V  N  F  T  C  R  V  T  F  E  T  Y  I  S  T  L  S  Y  F  F  L  F  E  G  C  R  Q  H  A  N  L  T  F  E  K  L  E  M  I  G  F  D  F  G  G   </second_frame>
            <third_frame>   C  L  L  C  M  E  V  V  S  K  S  F  D  L  C  T  P  *  T  S  A  C  F  V  W  N  S  M  N  V  A  Q  A  T  T  D  A  G  R  P  R  P  T  V  V  C  R  H  V  R  R  R  P  T  V  C  A  V  Q  G  L  *  W  H  A  T  P  D  D  G  R  P  S  M  L  S  K  G  E  D  G  M  P  R  P  T  T  A  D  R  L  C  C  Q  R  A  K  M  A  C  H  A  R  R  R  S  T  V  C  A  A  K  R  R  R  W  H  A  T  P  D  A  V  R  P  C  V  P  K  G  D  D  G  M  P  R  P  T  S  L  D  R  V  C  C  P  K  A  M  V  A  C  H  A  R   : R  R  S  T  V  C  A  A  Q  R  R  I  L  Q  S  T  P  V  R  R  R  P  L  Q  M  P  P  G  R  G  R  A  A  Y  A  D  P  F  A  P  *  H  L  T  W  L  *  *  S  H  P  T  S  R  K  P  L  T  V  T  C  H  *  S  L  N  M  S  L  G  L  I  N  E  L  N  F  T  K  N  S  Q  W  G  S  E  R  I  A  Q  H  L  A  A  D  *  *  T  S  L  A  V  L  L  L  K  L  I  F  Q  H  L  V  I  F  S  S  S  K  D  A  G  S  T  R  T  S  H  L  K  S  *  K  *  L  D  L  I  L  G  E  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0089P21.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="5139" stop="4759"/>
                    <exon start="4652" stop="4524"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>507</number_coding_nucleotides>
                  <number_encoded_amino_acids>169</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MLRKPRPMRAGHGRPLCAGTSDDGRPFVLSKGYDGMPRPTTADRLCCQRAKMACHARRRPTVYAVKGRRWHATPDVVRPCVLQKGEDGMPRQTPFDRVCPKAMMACHARRRSTVCAAQRRWWHATPDVVRPCVLPKGVFCSPRPFGAGLCRCRLAADVLRTQTHLPLDI*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0089P21.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="4432" stop="4232"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>201</number_coding_nucleotides>
                  <number_encoded_amino_acids>67</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TQLHEKLAMGLRTHSSTLSGRLVNFTCRVTFETYISTLSYFFLFEGCRQHANLTFEKLEMIGFDFGG</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="12614" PGL_stop="12765"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="12614" e_stop="12765"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.961"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.961">
            <gDNA_exon_boundary e_start="12614" e_stop="12765" e_length="152"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12614" stop="12765"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U591923" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TACGAATACGAACCGTGAAAGCGTGGCCTAACGATCCTTTAGACCTTCGGAATTCGAAGCTAGAGGTGTCAGAAAAGTTACCACAGGGATAACTGGCTTGTGGCAGCCAAGCGTTCATAGCGACGTTGCTTTTTGATCCTTCGATGTCGGCT</gDNA_template>
            <first_frame> Y  E  Y  E  P  *  K  R  G  L  T  I  L  *  T  F  G  I  R  S  *  R  C  Q  K  S  Y  H  R  D  N  W  L  V  A  A  K  R  S  *  R  R  C  F  L  I  L  R  C  R   </first_frame>
            <second_frame>  T  N  T  N  R  E  S  V  A  *  R  S  F  R  P  S  E  F  E  A  R  G  V  R  K  V  T  T  G  I  T  G  L  W  Q  P  S  V  H  S  D  V  A  F  *  S  F  D  V  G  </second_frame>
            <third_frame>   R  I  R  T  V  K  A  W  P  N  D  P  L  D  L  R  N  S  K  L  E  V  S  E  K  L  P  Q  G  *  L  A  C  G  S  Q  A  F  I  A  T  L  L  F  D  P  S  M  S  A </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLe0089P21.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="14289" PGL_stop="14962"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="14289" e_stop="14962"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.991"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.991">
            <gDNA_exon_boundary e_start="14289" e_stop="14962" e_length="674"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14289" stop="14962"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U600447" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CGATATTTTCCCTATTTTTTATTAATTTATTACTAATTTTTTGGAATTTTTGAAAAAAATAAAAATCAAAAAAAATTGTTGAAAAATATTTTTTTATACATATTAAAGTCAATTATGAAGGCTGATGTGTGTTTGTACCTTAGACCGCGCATATTTGGGTTGTACATTTTCATTATGATTCTCTGGAAAATCCATGTCTACTCCTGTCACATGGGCAAAACTTTTTTAAGCATATATAAGGGGGGTAGAGGTGTTGGAGGCAGACTGAGGCGCAGGCAGGCAGACGGCATAGGCGTCCCGTGGGCTTAGCAGGCGTGCTGCGTGGGCGCTTGATGGCATGCATGGCTTGTCCGTGCTACGCCGTTGGGCGTTTACAAAAACACGTCGGCGACGTCGACGGGTCGAGTGGGCAACGGCAGGCGGACGCCGAGGGCGTCCTGTGGGCTTAGTAGGCGTGCTGCGTGGGCGCTTGATGGCATGCATGGCTCGTCCGTGCTACGTCGTTGGGCGTCTACAAAAACATGCTAGCGACGTTTGCGGGGCAACTGAAGCGAAGGCAGGCGGACGTCGAGGGCGTCCTGTGGGCTTAGTAGGCGTGCTGCGTGGGCGCTTGACGGCATGCATGGCTCGTCCGTGCTACGCCGTTGGGCGTTTACAAAAACACGCCCGCGACG</gDNA_template>
            <first_frame> R  Y  F  P  Y  F  L  L  I  Y  Y  *  F  F  G  I  F  E  K  N  K  N  Q  K  K  L  L  K  N  I  F  L  Y  I  L  K  S  I  M  K  A  D  V  C  L  Y  L  R  P  R  I  F  G  L  Y  I  F  I  M  I  L  W  K  I  H  V  Y  S  C  H  M  G  K  T  F  L  S  I  Y  K  G  G  R  G  V  G  G  R  L  R  R  R  Q  A  D  G  I  G  V  P  W  A  *  Q  A  C  C  V  G  A  *  W  H  A  W  L  V  R  A  T  P  L  G  V  Y  K  N  T  S  A  T  S  T  G  R  V  G  N  G  R  R  T  P  R  A  S  C  G  L  S  R  R  A  A  W  A  L  D  G  M  H  G  S  S  V  L  R  R  W  A  S  T  K  T  C  *  R  R  L  R  G  N  *  S  E  G  R  R  T  S  R  A  S  C  G  L  S  R  R  A  A  W  A  L  D  G  M  H  G  S  S  V  L  R  R  W  A  F  T  K  T  R  P  R   </first_frame>
            <second_frame>  D  I  F  P  I  F  Y  *  F  I  T  N  F  L  E  F  L  K  K  I  K  I  K  K  N  C  *  K  I  F  F  Y  T  Y  *  S  Q  L  *  R  L  M  C  V  C  T  L  D  R  A  Y  L  G  C  T  F  S  L  *  F  S  G  K  S  M  S  T  P  V  T  W  A  K  L  F  *  A  Y  I  R  G  V  E  V  L  E  A  D  *  G  A  G  R  Q  T  A  *  A  S  R  G  L  S  R  R  A  A  W  A  L  D  G  M  H  G  L  S  V  L  R  R  W  A  F  T  K  T  R  R  R  R  R  R  V  E  W  A  T  A  G  G  R  R  G  R  P  V  G  L  V  G  V  L  R  G  R  L  M  A  C  M  A  R  P  C  Y  V  V  G  R  L  Q  K  H  A  S  D  V  C  G  A  T  E  A  K  A  G  G  R  R  G  R  P  V  G  L  V  G  V  L  R  G  R  L  T  A  C  M  A  R  P  C  Y  A  V  G  R  L  Q  K  H  A  R  D  </second_frame>
            <third_frame>   I  F  S  L  F  F  I  N  L  L  L  I  F  W  N  F  *  K  K  *  K  S  K  K  I  V  E  K  Y  F  F  I  H  I  K  V  N  Y  E  G  *  C  V  F  V  P  *  T  A  H  I  W  V  V  H  F  H  Y  D  S  L  E  N  P  C  L  L  L  S  H  G  Q  N  F  F  K  H  I  *  G  G  *  R  C  W  R  Q  T  E  A  Q  A  G  R  R  H  R  R  P  V  G  L  A  G  V  L  R  G  R  L  M  A  C  M  A  C  P  C  Y  A  V  G  R  L  Q  K  H  V  G  D  V  D  G  S  S  G  Q  R  Q  A  D  A  E  G  V  L  W  A  *  *  A  C  C  V  G  A  *  W  H  A  W  L  V  R  A  T  S  L  G  V  Y  K  N  M  L  A  T  F  A  G  Q  L  K  R  R  Q  A  D  V  E  G  V  L  W  A  *  *  A  C  C  V  G  A  *  R  H  A  W  L  V  R  A  T  P  L  G  V  Y  K  N  T  P  A  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0089P21.1" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="14581" stop="14961"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>381</number_coding_nucleotides>
                  <number_encoded_amino_acids>127</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ASRGLSRRAAWALDGMHGLSVLRRWAFTKTRRRRRRVEWATAGGRRGRPVGLVGVLRGRLMACMARPCYVVGRLQKHASDVCGATEAKAGGRRGRPVGLVGVLRGRLTACMARPCYAVGRLQKHARD</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0089P21.1" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="14325" stop="14597"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>270</number_coding_nucleotides>
                  <number_encoded_amino_acids>90</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FFGIFEKNKNQKKLLKNIFLYILKSIMKADVCLYLRPRIFGLYIFIMILWKIHVYSCHMGKTFLSIYKGGRGVGGRLRRRQADGIGVPWA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="16227" PGL_stop="17022"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="16227" e_stop="17022"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="16227" e_stop="17022" e_length="796"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16227" stop="17022"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U590815" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16297" stop="16473"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U590748" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCCTGCCAGTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACAAATTCAGACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTATCTACTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGAAGGGATGCATTTATTAGATAAAAGGTCGACGCGGGCTCTGCCCGTTGCTGCGATGATTCATGATAACTCGACGGATCGCACGGCCATCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGTGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCTCTATGAGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGACTTTGGGATGGGCCGGCCGGTCCGCCCTAGGTGTGCACCGGTCGTCTCGTCCCTTCTGTCGGCGATGCGCTCCTGGCCTTAATTGGCCGGGTCGTGCCTCCGGCGCTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCATGGG</gDNA_template>
            <first_frame> S  C  Q  *  S  Y  A  C  L  K  D  *  A  M  H  V  *  V  *  T  N  S  D  C  E  T  A  N  G  S  L  N  Q  L  *  F  V  *  W  Y  L  L  L  G  *  P  *  *  F  *  S  *  Y  V  Q  Q  T  P  T  S  G  R  D  A  F  I  R  *  K  V  D  A  G  S  A  R  C  C  D  D  S  *  *  L  D  G  S  H  G  H  R  A  G  D  A  S  F  K  F  L  P  Y  Q  L  S  M  V  G  *  W  P  T  M  V  V  T  G  D  G  E  L  G  F  D  S  G  E  G  A  *  E  T  A  T  T  S  K  E  G  S  R  R  A  N  Y  P  I  L  T  R  G  G  S  D  N  K  *  Q  Y  R  A  L  *  V  W  *  L  E  *  V  Q  S  K  S  L  N  E  D  P  L  E  G  K  S  G  A  S  S  R  G  N  S  S  S  N  S  V  Y  L  S  C  C  S  *  K  A  R  S  W  T  L  G  W  A  G  R  S  A  L  G  V  H  R  S  S  R  P  F  C  R  R  C  A  P  G  L  N  W  P  G  R  A  S  G  A  V  T  L  K  K  L  E  C  S  K  Q  A  Y  A  L  Y  T  L  A  W  </first_frame>
            <second_frame>  P  A  S  S  H  M  L  V  S  K  I  K  P  C  M  C  K  Y  E  Q  I  Q  T  V  K  L  R  M  A  H  *  I  S  Y  S  L  F  D  G  I  Y  Y  S  D  N  R  S  N  S  R  A  N  T  C  N  K  P  R  L  L  E  G  M  H  L  L  D  K  R  S  T  R  A  L  P  V  A  A  M  I  H  D  N  S  T  D  R  T  A  I  V  P  A  T  H  H  S  N  F  C  P  I  N  F  R  W  *  D  S  G  L  P  W  W  *  R  V  T  E  N  *  G  S  I  P  E  R  E  P  E  K  R  L  P  H  P  R  K  A  A  G  A  Q  I  T  Q  S  *  H  G  E  V  V  T  I  N  N  N  T  G  L  Y  E  S  G  N  W  N  E  Y  N  L  N  P  L  T  R  I  H  W  R  A  S  L  V  P  A  A  A  V  I  P  A  P  I  A  Y  I  *  V  V  A  V  K  K  L  V  V  G  L  W  D  G  P  A  G  P  P  *  V  C  T  G  R  L  V  P  S  V  G  D  A  L  L  A  L  I  G  R  V  V  P  P  A  L  L  L  *  R  N  *  S  A  Q  S  K  P  T  L  C  I  H  *  H  G </second_frame>
            <third_frame>   L  P  V  V  I  C  L  S  Q  R  L  S  H  A  C  V  S  M  N  K  F  R  L  *  N  C  E  W  L  I  K  S  V  I  V  C  L  M  V  S  T  T  R  I  T  V  V  I  L  E  L  I  R  A  T  N  P  D  F  W  K  G  C  I  Y  *  I  K  G  R  R  G  L  C  P  L  L  R  *  F  M  I  T  R  R  I  A  R  P  S  C  R  R  R  I  I  Q  I  S  A  L  S  T  F  D  G  R  I  V  A  Y  H  G  G  D  G  *  R  R  I  R  V  R  F  R  R  G  S  L  R  N  G  Y  H  I  Q  G  R  Q  Q  A  R  K  L  P  N  P  D  T  G  R  *  *  Q  *  I  T  I  P  G  S  M  S  L  V  I  G  M  S  T  I  *  I  P  *  R  G  S  I  G  G  Q  V  W  C  Q  Q  P  R  *  F  Q  L  Q  *  R  I  F  K  L  L  Q  L  K  S  S  *  L  D  F  G  M  G  R  P  V  R  P  R  C  A  P  V  V  S  S  L  L  S  A  M  R  S  W  P  *  L  A  G  S  C  L  R  R  C  Y  F  E  E  I  R  V  L  K  A  S  L  R  S  V  Y  I  S  M   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0089P21.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="16321" stop="16548"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>225</number_coding_nucleotides>
                  <number_encoded_amino_acids>75</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ISYSLFDGIYYSDNRSNSRANTCNKPRLLEGMHLLDKRSTRALPVAAMIHDNSTDRTAIVPATHHSNFCPINFRW*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="17425" PGL_stop="17558"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="17425" e_stop="17558"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.933"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.933">
            <gDNA_exon_boundary e_start="17425" e_stop="17558" e_length="134"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17425" stop="17558"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U591208" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TACCAGGTCCAGACATAGTAAGGATTGACAGACTGAGAGCTCTTTCTTGATTCTATGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTCAGCCT</gDNA_template>
            <first_frame> Y  Q  V  Q  T  *  *  G  L  T  D  *  E  L  F  L  D  S  M  G  G  G  A  W  P  F  L  V  G  G  A  I  C  L  V  N  S  V  N  E  R  D  L  S   </first_frame>
            <second_frame>  T  R  S  R  H  S  K  D  *  Q  T  E  S  S  F  L  I  L  W  V  V  V  H  G  R  S  *  L  V  E  R  F  V  W  L  I  P  L  T  N  E  T  S  A  </second_frame>
            <third_frame>   P  G  P  D  I  V  R  I  D  R  L  R  A  L  S  *  F  Y  G  W  W  C  M  A  V  L  S  W  W  S  D  L  S  G  *  F  R  *  R  T  R  P  Q  P </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLe0089P21.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 207 chains have been computed
$ 
$ memory statistics:
$ 37144 bytes spliced alignments in total
$ 19 spliced alignments have been stored
$ 1954 bytes was the average size of a spliced alignment
$ 14328 bytes predicted gene locations in total
$ 8 predicted gene locations have been stored
$ 1791 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 217 backtrace matrices have been allocated
$ 
$ date finished: 2009-12-01 10:57:57
-->
