<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-07-28 19:45:47"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U565169" ref_strand="+" ref_description="SGN-U565169 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|30685465|ref|NP_193883.2| (e_value=7e-79) transducin / WD-40 repeat protein family [Arabidopsis thaliana]; (*ATH) AT4G21520.1 (e_value=5e-81)  Symbol: None | transducin family protein / WD-40 repeat family protein, contains 5 WD-40 repeats (PF00400); similar to guanine nucleotide-binding protein beta 5 (GI:1001939) (Mesocricetus auratus) | chr4:11447498-11450389 REVERSE | Aliases: F18E5.14... ; (*SWP) sp|Q5XII5|WDR79_RAT (e_value=6e-46) WD repeat-containing protein 79 OS=Rattus norvegicus GN=Wdr79; ">
      <seq>aacacttgtttttggcgctaacaccgttcacagtgaatccatgggggaagaagcttcagagcagcagcttgttatagaatccatggatgaagatgctgtagagctaccggaaacccctattgaagctgtagaagagaaaccatcggaagaaccttacccttggccggttattcagtatgatgttccgccgtatctaacctatcatttcttcaatcagttcaggacgccttcaaaccctaataatttcttaaagggtgtcaaatggtctcctgatggttctggtttcctcacttgctctgatgataataccttttgtttatataacttgccatatgatgaaagtggacagcttgctgatttttcctcatcagctgctgatacagattcgtatgctgcaagtcttgtcatgagtgacggggagtctgtatatgactattgctggtatccctatatgtcttcttcaagtccagagacatgtgtttttgcaagtactacccgtgatcaccctattcatctctgggatgctactactggacagttacgttgtacataccgtgcttatgatgccatggacgagatcactgctgccttttcaattgccttcaatcccgcagggactaagatatttgctggttacaacaaatccataagaatatttgatattcatcggcctggcagagattttacccagcactccacccttcaaggaaataaagaagggcaatcaggcattatatcctcaatggctttctgtccaagccattcaaggttactggcaactggct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="-" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="19636" stop="16509"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19336" g_stop="19073" g_length="264"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="264" r_length="264" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19072" i_stop="18971" i_length="102">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18970" g_stop="18908" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="265" r_stop="327" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18907" i_stop="18421" i_length="487">
            <donor d_prob="0.672" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18420" g_stop="18365" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="328" r_stop="383" r_length="56" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18364" i_stop="18185" i_length="180">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18184" g_stop="18104" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="384" r_stop="464" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="18103" i_stop="18023" i_length="81">
            <donor d_prob="0.911" d_score="1.00"/>
            <acceptor a_prob="0.686" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="18022" g_stop="17949" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="465" r_stop="538" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="17948" i_stop="17796" i_length="153">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="17795" g_stop="17713" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="539" r_stop="621" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="17712" i_stop="17246" i_length="467">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.634" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="17245" g_stop="17139" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="622" r_stop="728" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="17138" i_stop="16866" i_length="273">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.447" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="16865" g_stop="16809" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="729" r_stop="785" r_length="57" r_score="0.947"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="-" ref_id="SGN-U565169" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>785</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U565169" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19336" e_stop="19073"/>
          <exon e_start="18970" e_stop="18908"/>
          <exon e_start="18420" e_stop="18365"/>
          <exon e_start="18184" e_stop="18104"/>
          <exon e_start="18022" e_stop="17949"/>
          <exon e_start="17795" e_stop="17713"/>
          <exon e_start="17245" e_stop="17139"/>
          <exon e_start="16865" e_stop="16809"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACACTTGTTTTTGGCGCTAACACCGTTCACAGTGAATCCATGGGGGAAGAAGCTTCAGAGCAGCAGCTTGTTATAGAATCCATGGATGAAGATGCTGTAGAGCTACCGGAAACCCCTATTGAAGCTGTAGAAGAGAAACCATCGGAAGAACCTTACCCTTGGCCGGTTATTCAGTATGATGTTCCGCCGTATCTAACCTATCATTTCTTCAATCAGTTCAGGACGCCTTCAAACCCTAATAATTTCTTAAAGGGTGTCAAATGGTATGCTTTTCTCCTCTTTTTGATTCTCCATTTCTTATGCCGTGTTTTCTCTGTTTTTTCCCTATGTAGTCTAATGGCTATTTTTTTTTCCTGGAATTATAGGTCTCCTGATGGTTCTGGTTTCCTCACTTGCTCTGATGATAATACCTTTTGTTTATATAACTTGTAAGTTTCTTCCCAGTTTCTGATGATAAATGATAAATTTCTTTGTAGGAGCAAATTAGAAATATATGAATTCGAAGTCTCGAATAACTGTTAAGCTTATATGAGTAGCTTCTCTTGTAACTTTTTGGTGATTGGATCTGCTGGGATTAAAATTTATTGACAGATAGAGTTTCATTTAACTCTGCCTGTGTGATCTTAGCTTTCCGGTCAAAGCCTGGATATCGTGAGAAAGGTTGTGGTAGGTTGATAACTAGCATTAAAAATAGTCATGATATGATGAATCATCTAAACATAGAGGGGAATGGATATAGATAATTCATATAGACAGACTCAAGGAGTTTGTGATTGAGATACATTAATTCATTGACCAGATAGTGTTTGCTGGGCTGACTATGAGGCACAATGCTGATAGTAGAAAATGGTAGTTATTCTTGCATTTCCATTGTCCTTGAGTTGCTTTGTTAATTTGGCTCTGGTTCATTGATAGGCCATATGATGAAAGTGGACAGCTTGCTGATTTTTCCTCATCAGCTGCTGATACAGGTAATATATGCTACTAGTTTATATAGGTTTGAATGTGAAGTAACATTGTGGAAGTATGCTATAGTAGATTGCTTTCAGTGTTGGAATTTGTTGATCATGTGTGTTCAATATTGAACTTGATATGATTTTCTTTCTCCTGTTTTTGTTTATTTTGATTAAACACTGACTGTTTTTTTGCAGATTCGTATGCTGCAAGTCTTGTCATGAGTGACGGGGAGTCTGTATATGACTATTGCTGGTATCCCTATATGTCTTCTTCAAGTATGTCACTCGTCTTGTTATTTTGTTATAACGCTGATGGTGATTAGAAAAAAATAACTAGAATTTGCTTTAATGCCTTAGGTCCAGAGACATGTGTTTTTGCAAGTACTACCCGTGATCACCCTATTCATCTCTGGGATGCTACTACTGGACAGGTGTGTCATTGTCTTTAAAGCTGTTGCTAAAGATGCTTTTTCCTCTCACTGCTCTTTGAAAGGTGGCTAGCAGCCCACGACTTGTGACACTGCTCAATGAGCTTTGCTAGGAAGATATTCTTCCCTACATTATCTTTTCTTGGGTGATTGCAGTTACGTTGTACATACCGTGCTTATGATGCCATGGACGAGATCACTGCTGCCTTTTCAATTGCCTTCAATCCCGCAGGGACTAAGTAAACATTCTTCTTTATCAAAGTGCTCATCTCCTTCCTTGCTCTTGTGGTCACTGTTCATGTAGAGGCACCTGTTTCATCTTTCTTTAATATTTATTTGTAGTTTTTTAAAGAGAGGAAAAAATGAGTTCTTTTGATTTATTGAGAAAGTAATCTATCCATAATTTCTGGCAGTGTGATTAGATTGACAGTAATGAGGCCTAGTTGTTAATTTAGGTGGTTGCAAGTTTTGATACTCTGTCCTCACAAAGGATCATTTTCCTATTTTGTTTTTTCATTATATTGTTTAGACTTAAAGACATGCATTTTCAGTTTTTCTTCTAGTATCTTCTTACTTCATATGCTCTATACTAACTTCTTATGTGTTATTGTGATTTGCTTCACTTTCTTTATTTATGTACTTACAGTTGTTAATATGCTAAGTTTAAACGAAAGTTTTCATTGTTACTTCATTCTTCTCGAATTAGGATATTTGCTGGTTACAACAAATCCATAAGAATATTTGATATTCATCGGCCTGGCAGAGATTTTACCCAGCACTCCACCCTTCAAGGAAATAAAGAAGGGCAATCAGGTATGTTCAGCTAGCTGCTTTTCTTTATGATCACGTTTTTAGCATTTGACTTTATAAATAAGACAATTAGCTAACAATATCTGTGTTAAACACATCAATCTGATAGTTATCTCAAAGAGAAACTATTAAGTCCTCTTGAGGCTAATTAATTTTACCACTTTTGATGCCTCCATTATTATTCATTAAACATTTATTACTCTGGCACCTTTTCTCTAATCTGTTAAGGCATTATTCCTCATTTATTATTCCAACTCCTTTTCTCTTATCTGTTAGGAATTATATCCTCAATGGCTTTCTGTCCAAGCCATTCAGGGTTATTGGCAACTGGCT</genome_strand>
        <mrna_strand>AACACTTGTTTTTGGCGCTAACACCGTTCACAGTGAATCCATGGGGGAAGAAGCTTCAGAGCAGCAGCTTGTTATAGAATCCATGGATGAAGATGCTGTAGAGCTACCGGAAACCCCTATTGAAGCTGTAGAAGAGAAACCATCGGAAGAACCTTACCCTTGGCCGGTTATTCAGTATGATGTTCCGCCGTATCTAACCTATCATTTCTTCAATCAGTTCAGGACGCCTTCAAACCCTAATAATTTCTTAAAGGGTGTCAAATG......................................................................................................GTCTCCTGATGGTTCTGGTTTCCTCACTTGCTCTGATGATAATACCTTTTGTTTATATAACTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCATATGATGAAAGTGGACAGCTTGCTGATTTTTCCTCATCAGCTGCTGATACAG....................................................................................................................................................................................ATTCGTATGCTGCAAGTCTTGTCATGAGTGACGGGGAGTCTGTATATGACTATTGCTGGTATCCCTATATGTCTTCTTCAA.................................................................................GTCCAGAGACATGTGTTTTTGCAAGTACTACCCGTGATCACCCTATTCATCTCTGGGATGCTACTACTGGACAG.........................................................................................................................................................TTACGTTGTACATACCGTGCTTATGATGCCATGGACGAGATCACTGCTGCCTTTTCAATTGCCTTCAATCCCGCAGGGACTAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATTTGCTGGTTACAACAAATCCATAAGAATATTTGATATTCATCGGCCTGGCAGAGATTTTACCCAGCACTCCACCCTTCAAGGAAATAAAGAAGGGCAATCAG.................................................................................................................................................................................................................................................................................GCATTATATCCTCAATGGCTTTCTGTCCAAGCCATTCAAGGTTACTGGCAACTGGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U572850" ref_strand="+" ref_description="SGN-U572850 Tomato 200607#2 [17 ESTs aligned] (*GB) gi|147846786|emb|CAN78503.1| (e_value=5e-159) hypothetical; (*ATH) AT4G21470.1 (e_value=7e-157) | Symbol: ATFMN/FHY | Bifunctional enzyme that catalyzes hydrolysis of FMN to riboflavin, and phosphorylation of riboflavin to FMN. | chr4:11431135-11433332 FORWARD | Aliases: F18E5.90, F18E5_90, ATFMN/FHY; (*SWP) sp|Q969G6|RIFK_HUMAN (e_value=9e-38) Riboflavin kinase OS=Homo sapiens GN=RFK; ">
      <seq>ggagtccccatttccccataacaaccaagaaaaagttgaagtgcttcatcttctcagttcaataatcaattggtgaagttggattataattgctctccatgtctgttgaacgaactttcaagaagctagtttctggtgtcatccttgatttggatggtacacttcttaatacagatggcattgtgagtgagattttaaaggttttcttagttaagtatggaaagcaatgggatgggagagaagctccccacatagtagggaaaaccccaacagaagctgctgctgccgttgttgaagattatgggctgccactgtcaagagatgaatttctttcgcaattttacccaatgctgtctgatcagtggcgcaatatcaaagctcttccaggggccaatcgattgattaaccatttgagcggtcatggtgtacccatggcattggcgtcaaattcttctaaatctaacattgaggccaaaatttttcatcatgcaggatggaaagagtccttctcagctattgttggaggagatgaagtgaaagctggaaagccgtctccggaaatatttcttgaagcagctaaaagactcaacatggatccatccagctttcttgtcattgaagattcaataccaggtgttactgctggtaaagatgctggaatggcagtagttgctgtaccatctcttgcaaagcagtctcatctttatacctctgctgatgaagtgatcaattctcttctagatttgcaactagaaaagtggggactacctgcatttcaagataggatagaaggtactttgcctttagaaccttggtatataggtggtcctgtcattaagggatttgggcgcggctcaaaggttctcgggatccccacagctaatttatccccacaaggttattcagccattctttcagaacatccagcgggtgtatattttggatgggcaggactatcaggtcgaggtgtctacaagatggtcatgagcattggttggaatcctttcttcaacaatacagagaagacggttgaaccatggttgcttcatgacttcaatgaggacttctatggtgaggaattgcatctagttgttgtgggctacatacggccggaggccaacttttcgtcacttgaagccttgatagcaaaaattcacgaggacaggaagattgcagaaagagctctcgaacttcctcaatacttgaagtacaaggacgatccataccttaaaagttctctgcatcaacaaaattgatcattgaagtgttgaagttcattattgttctgattgggattgtatctgtttattctgtcctaattcctcagactacaatagtctccccatcaaaatgctctatacaataaaaagataaaaagaatttgaatgtatagctattcagaagttaaagaaccttccagggggtattagtgaatggcaaagggttcaagtgcaggatctttgtactgagaatttcaagttcctgtgtaaatgttgattaatgtaacttgttttctatctgtttataatatggaaacatgcaagctgatgcagattgtaaattgcttcctttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="-" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="25029" stop="19431"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24731" g_stop="24647" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="85" r_length="85" r_score="0.976"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="24646" i_stop="24009" i_length="638">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24008" g_stop="23920" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="86" r_stop="174" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="23919" i_stop="23323" i_length="597">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="23322" g_stop="23136" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="175" r_stop="361" r_length="187" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="23135" i_stop="22224" i_length="912">
            <donor d_prob="0.764" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="22223" g_stop="22093" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="362" r_stop="492" r_length="131" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="22092" i_stop="21966" i_length="127">
            <donor d_prob="0.602" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="21965" g_stop="21896" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="493" r_stop="562" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="21895" i_stop="21805" i_length="91">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.686" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="21804" g_stop="21739" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="563" r_stop="628" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="21738" i_stop="21191" i_length="548">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="21190" g_stop="21036" g_length="155"/>
          <reference_exon_boundary r_type="cDNA" r_start="629" r_stop="783" r_length="155" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="21035" i_stop="20951" i_length="85">
            <donor d_prob="0.903" d_score="1.00"/>
            <acceptor a_prob="0.905" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="20950" g_stop="20855" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="784" r_stop="879" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="20854" i_stop="20577" i_length="278">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.935" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="20576" g_stop="20425" g_length="152"/>
          <reference_exon_boundary r_type="cDNA" r_start="880" r_stop="1031" r_length="152" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="20424" i_stop="20348" i_length="77">
            <donor d_prob="0.877" d_score="1.00"/>
            <acceptor a_prob="0.958" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="20347" g_stop="20264" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="1032" r_stop="1115" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="20263" i_stop="20189" i_length="75">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="20188" g_stop="19731" g_length="458"/>
          <reference_exon_boundary r_type="cDNA" r_start="1116" r_stop="1573" r_length="458" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="-" ref_id="SGN-U572850" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1573</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U572850" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24731" e_stop="24647"/>
          <exon e_start="24008" e_stop="23920"/>
          <exon e_start="23322" e_stop="23136"/>
          <exon e_start="22223" e_stop="22093"/>
          <exon e_start="21965" e_stop="21896"/>
          <exon e_start="21804" e_stop="21739"/>
          <exon e_start="21190" e_stop="21036"/>
          <exon e_start="20950" e_stop="20855"/>
          <exon e_start="20576" e_stop="20425"/>
          <exon e_start="20347" e_stop="20264"/>
          <exon e_start="20188" e_stop="19731"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAGTCCCCATTTCCCCATAACAACCAAGAAAAAGTTGAAGTGCTTCATCTTCTCAGTTCAATAATCAATTGGTGAAGTTGGATTGTGAGTATTTACATCATTTAGCTTATTTTATTGATTGGTGATGCAAATTAGCTGATCGTATGTAGAATTTTGTTATTTCAATGTTCAATAATCAATTTGGTTGTTATCCTTGTCACTTCCTGTTTTAAGTTCATTCAGTGATCATTTAATCAAGTTCCCTAAAATTTTTCATGCTTCTCTTGTTTGTTTGAGGCTTTATTTTCTCATGTTATCTCAACCACATAGACAGTAAACGTATTTCTAGAAACTTCCGATCATAGTCCTTAGCGCCCTCTATGGAAGAGCTAAAAGTCTGGCTATGAGAGCGAAAAACTAATACAATTATACAGTTTTGATGACCAGGAAAGTTAAAATGAAATCCAAGTAATAGTAGTTTTGGTTCTGTTGTAATCCATATTAATCGGTTTCATTCCGACAATCTTAGGTGGTTAGCTTGGGCGTTAATGGTATTTTATATTCATAATACATTGTCTAATGACAATCTTCCTTACTTGAATCATGATAAATTGATATTGTATATTGATTTTTATGGTTTACATTTGACTTCAAGATTAAATTCATGTATTTGGATTAATTATTGTGCAAGTATATCTCATATTCACATAACATGAACATAGGTATCTGTTTCTGTGTGGCAGATAATTGCTCTCCATGTCTGTTGAACGAACTTTCAAGAAGCTAGTTTCTGGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAGGTCAGTAGTACTCTTCGTGTTTTGACTTTACACTTCTCAAATTATATTCTTGGCCGTTCACCTAAATCATTCATGGTATTAGTTCTTGATATATGAACTACTACTTTTAATATTCAAAAGCATTTTCTAGAGTTCCTTTCATTTCCTTCCAACTTTTACATATCCAATAGAACTATGAAATTACCAGAATTTTTTGAATATTTGGATGCATATATTTACAATTTGATTTTTGTTACTGCTGTAATCTTTATTCTAAGTGTAGGTTATATCATTGCAGTATAATTGTTTTATCCTTTCAAATTTCTCTAATCAAACTCTATTGTCTGAGGACATACTTAATATGAGGTCTCTGTAAGCTTAGTGGGCCTGCAGCTATTTCGAAATTCGATTCCGAAACTTGAGAAGTACTCTGGCAATCAAGTCTCAAGTATGAACAACTTACAACTATGAAGTCCTCTTTATGCAAAAGAAATTTGGATCTAGGCATTCTGTTATAGAGTTAACTGCAGCACAGTGTCAATCCTTATATTACCAATGTCTTGCGTTTCTTTATAGTTTCAGGTTTCCAATGTTAATTTGATCTCTTTGTTCTGACAGATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCAGTAATAAACCAGCAAACATAGTTTCATTTCCTTTCTGTTTATTGATAAGGCTTATACAAACTGAAATTGAATAACCCATGGGAAGATTATTCGACTTAAAATATTAGTAGGCGGATTCTTTTCGTCATATCCTATTTATGGATGTTAAAGGATAAAGTTACAAATTAAAAACCTTCTGCTCTTTTATAGCTGGAGCATGGATGATAAATTGCAAGCGAGTTAGTAGATAAAAGAGTTGTGGACAACATAGTCCTGCAGTGTTTGTTCTGCTTAAAACCCTTACAAAAAAGTATGTAGGTACTGGATAGTAATTAATATTGTGGAGAATTACTAAACGGGGAACCACTCATTTTGTTCTCCAATTTAGAAAATGCAAATATTCTTGTTTCTTTCTTTCATTTATCTTCTTTGCTTTTGGTGATAAAAATAGATATCCAATGAAGAGCAAAGAAAAAAAGAGGCAAGCAAGAACGGAACAACTACATTAACTTATCAAAAAGAGATAACTACATTTTGTTTATTAGTTGATCATCTGTGTCTTGTATGTCAAACTTGTTTTTTAAAATTTAAATGGAGTGAATTTCCCTTTTTTTCTTTTGTTCATCTGTTTCATTTTGGGGTAGGGGGAGAGGAGGGGAAGGGGTAGAAGCTCTGGAAGGACTAAGAGTGATATACTCATCTATGGCCTTGTTGGTTTAAGGAAGATGATTTCATTCAATCTTGCTGAGAGTGGAAGCAATGTTGGATTGGTGTTACCTTTTTCTTTTCTTTGAGCTAGTAAAACTCTGATTATCTTTTGACTGTTTGCGAGATCTTGTGATGTACAATTATGTAACTTGTATATCTATTCTCTTCTGCATATACATTCCAGTTCAAAGTTCTTATAAAATTTTGTCAATCAATTTGGTATAGGTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAGGTAGAGTTCTAACATGTATTGCTAGAGAGGTATTTCTTTCCTTAGGAAGGTATTTTGTGCCAGTCCAGCATGTAAGATGGCATTTATGCTTGGTGCTTTGATTGGGATAGTCTTTATTTTTTTTCAGGATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAGCCGTCTCCGGAAATGTAAAACTTGATGAATTGATTATCTTTGTCCTCCACATTTCATAATCTGGTATTCTGGATGTTAAATTAACTTAATATCTTCTTTTGTAAGATTTCTTGAAGCAGCTAAAAGACTCAACATGGATCCATCCAGCTTTCTTGTCATTGAAGATTCAATGTGAGTTTTTATCTTCAAAACTTTTGTAGCGGTATGTAGGAAAATCTAACTACTGGTCAAAAGAAGAAAAAAAGAAATGTGCCTGTCGGCTAGATAAGCAGCATGGTTGACTCTAGCTACTAACTTGTGACATCATAATTTACAATTCGGAAAAGGGCCAAAAATACCCTTAGACTATTTGAAAAGGTTCAATGTTACCCCTCATCCACCTATTGGGTTAAAAATACCCCTCAATCCACCTATTTGGTTTGTTTCTACCCTTAAAACTAACAACCTTTTAAAAAAAATTATTATTATTATCACTTATTATTTTTCTTTTTTATTGGATAAATCAAATCCCAACCTATTTAATTTTTTCCTACCCACCCATTTTAGTGTCCATGACCCAAACTCAATTAGAAGAGTTAAAATAACTTGTCATTGCTTTTGCATTTTCTAGGCTGAATATGAACTTTTTTTCTCTCCCAAGAGCATATTATTTTGAATTGGATGTAAATTATTTTATCTCATAACTTAGTGAGAGTAACTCGACCAGATACATATGTTAGACCAGGTGTTACTGCTGGTAAAGATGCTGGAATGGCAGTAGTTGCTGTACCATCTCTTGCAAAGCAGTCTCATCTTTATACCTCTGCTGATGAAGTGATCAATTCTCTTCTAGATTTGCAACTAGAAAAGTGGGGACTACCTGCATTTCAAGATAGTAAGTCTTTATGACTGCTTTACTTGTATGACGTGTAGTCATGTACTTGATTTCTCTTCCAATTTTTGACTGGAAGCATATGCAGGGATAGAAGGTACTTTGCCTTTAGAACCTTGGTATATAGGTGGTCCTGTCATTAAGGGATTTGGGCGCGGCTCAAAGGTTCTCGGGATCCCCACAGGTATGCGGTCTTCTTTATTCCTTCTGCTGAATGGCTAAAATAAATGCTTGACTCGTTATCTGTGTATACTTGAAATGACTTGAGAATTTCTCAGAAGTTTGTTATTGGAATTTCAGTTTCTTGTGAGCCTGTCATATCAGAGATATTGATTTTTATGTCAAATTATTATCTGGATTCGAACTCCAATTGTTGGAGGGGCATGGAAGATTAGTATCTTGCCTCGTATGACTTAACAGTGATGTGTTTTTCTATTCTTATGGGGTCAATATTCTTTTCAGCTAATTTATCCCCACAAGGTTATTCAGCCATTCTTTCAGAACATCCAGCGGGTGTATATTTTGGATGGGCAGGACTATCAGGTCGAGGTGTCTACAAGATGGTCATGAGCATTGGTTGGAATCCTTTCTTCAACAATACAGAGAAGACGGTTGTAAGTGTGTCGTGACATATGTTTCTTCTGTATTCTTGACTTCTTTGGTGTTTGTTGAAAGACAACTTTACTTTTAGGAACCATGGTTGCTTCATGACTTCAATGAGGACTTCTATGGTGAGGAATTGCATCTAGTTGTTGTGGGCTACATACGGCCGGAGGTATTGTGGCCTAGTTACTCTTATTTTTCCCTTTCCTTTCTTACATCACTTGCTGATATTACTGTCTATTTGCAGGCCAACTTTTCGTCACTTGAAGCCTTGATAGCAAAAATTCACGAGGACAGGAAGATTGCAGAAAGAGCTCTCGAACTTCCTCAATACTTGAAGTACAAGGACGATCCATACCTTAAAAGTTCTCTGCATCAACAAAATTGATCATTGAAGTGTTGAAGTTCATTATTGTTCTGATTGGGATTGTATCTGTTTATTCTGTCCTAATTCCTCAGACTACAATAGTCTCCCCATCAAAATGCTCTATACAATAAAAAGATAAAAAGAATTTGAATGTATAGCTATTCAGAAGTTAAAGAACCTTCCAGGGGGTATTAGTGAATGGCAAAGGGTTCAAGTGCAGGATCTTTGTACTGAGAATTTCAAGTTCCTGTGTAAATGTTGATTAATGTAACTTGTTTTCTATCTGTTTATAATATGGAAACATGCAAGCTGATGCAGATTGTAAATTGCTTCCTTTT</genome_strand>
        <mrna_strand>GGAGTCCCCATTTCCCCATAACAACCAAGAAAAAGTTGAAGTGCTTCATCTTCTCAGTTCAATAATCAATTGGTGAAGTTGGATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATTGCTCTCCATGTCTGTTGAACGAACTTTCAAGAAGCTAGTTTCTGGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAG...............................................................................................................................GATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAGCCGTCTCCGGAAAT...........................................................................................ATTTCTTGAAGCAGCTAAAAGACTCAACATGGATCCATCCAGCTTTCTTGTCATTGAAGATTCAAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGGTGTTACTGCTGGTAAAGATGCTGGAATGGCAGTAGTTGCTGTACCATCTCTTGCAAAGCAGTCTCATCTTTATACCTCTGCTGATGAAGTGATCAATTCTCTTCTAGATTTGCAACTAGAAAAGTGGGGACTACCTGCATTTCAAGATA.....................................................................................GGATAGAAGGTACTTTGCCTTTAGAACCTTGGTATATAGGTGGTCCTGTCATTAAGGGATTTGGGCGCGGCTCAAAGGTTCTCGGGATCCCCACAG......................................................................................................................................................................................................................................................................................CTAATTTATCCCCACAAGGTTATTCAGCCATTCTTTCAGAACATCCAGCGGGTGTATATTTTGGATGGGCAGGACTATCAGGTCGAGGTGTCTACAAGATGGTCATGAGCATTGGTTGGAATCCTTTCTTCAACAATACAGAGAAGACGGTT.............................................................................GAACCATGGTTGCTTCATGACTTCAATGAGGACTTCTATGGTGAGGAATTGCATCTAGTTGTTGTGGGCTACATACGGCCGGAG...........................................................................GCCAACTTTTCGTCACTTGAAGCCTTGATAGCAAAAATTCACGAGGACAGGAAGATTGCAGAAAGAGCTCTCGAACTTCCTCAATACTTGAAGTACAAGGACGATCCATACCTTAAAAGTTCTCTGCATCAACAAAATTGATCATTGAAGTGTTGAAGTTCATTATTGTTCTGATTGGGATTGTATCTGTTTATTCTGTCCTAATTCCTCAGACTACAATAGTCTCCCCATCAAAATGCTCTATACAATAAAAAGATAAAAAGAATTTGAATGTATAGCTATTCAGAAGTTAAAGAACCTTCCAGGGGGTATTAGTGAATGGCAAAGGGTTCAAGTGCAGGATCTTTGTACTGAGAATTTCAAGTTCCTGTGTAAATGTTGATTAATGTAACTTGTTTTCTATCTGTTTATAATATGGAAACATGCAAGCTGATGCAGATTGTAAATTGCTTCCTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U587890" ref_strand="+" ref_description="SGN-U587890 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>aacaatcggcatcagcttgcatgtttccatattataaacaaataaaaaacaagttacattaatcaacatttacccaggaacttgaaattttcagtacaaaaatcctgcacttgaaccctttgccattcactaataccccctggaaggttttttaacttttgaatagctatacattcaaattttttttatttttttattgtataaagcattttgagggggaaactattgtagtctgaggaattaggacaaaataaacagatccaatcccaatcaaaacaataatgaacttaaacacttcaatgatcaattttgttgatgcaaaaaacttttaagggatggatcgtccttgtacttcaagtattgaggaagttcgagagctttttttgcaattttcctggccttggaaatttttgctaacaaggtttaaagggacaaaaaggtggcctccgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="19446" stop="20492"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19745" g_stop="20194" g_length="450"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="450" r_length="450" r_score="0.918"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-U587890" ref_strand="+">
        <total_alignment_score>0.918</total_alignment_score>
        <cumulative_length_of_scored_exons>450</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U587890" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19745" e_stop="20194"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACAATCTGCATCAGCTTGCATGTTTCCATATTATAAACAGATAGAAAACAAGTTACATTAATCAACATTTACACAGGAACTTGAAATTCTCAGTACAAAGATCCTGCACTTGAACCCTTTGCCATTCACTAATACCCCCTGGAAGGTTCTTTAACTTCTGAATAGCTATACATTCAAATTCTTTTTATCTTTTTATTGTATAGAGCATTTTGATGGGGAGACTATTGTAGTCTGAGGAATTAGGACAGAATAAACAGATACAATCCCAATCAGAACAATAATGAACTTCAACACTTCAATGATCAATTTTGTTGATGCAGAGAACTTTTAAGGTATGGATCGTCCTTGTACTTCAAGTATTGAGGAAGTTCGAGAGCTCTTTCTGCAATCTTCCTGTCCTCGTGAATTTTTGCTATCAAGGCTTCAAGTGACGAAAAGTTGGCCTGCAA</genome_strand>
        <mrna_strand>AACAATCGGCATCAGCTTGCATGTTTCCATATTATAAACAAATAAAAAACAAGTTACATTAATCAACATTTACCCAGGAACTTGAAATTTTCAGTACAAAAATCCTGCACTTGAACCCTTTGCCATTCACTAATACCCCCTGGAAGGTTTTTTAACTTTTGAATAGCTATACATTCAAATTTTTTTTATTTTTTTATTGTATAAAGCATTTTGAGGGGGAAACTATTGTAGTCTGAGGAATTAGGACAAAATAAACAGATCCAATCCCAATCAAAACAATAATGAACTTAAACACTTCAATGATCAATTTTGTTGATGCAAAAAACTTTTAAGGGATGGATCGTCCTTGTACTTCAAGTATTGAGGAAGTTCGAGAGCTTTTTTTGCAATTTTCCTGGCCTTGGAAATTTTTGCTAACAAGGTTTAAAGGGACAAAAAGGTGGCCTCCGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U572848" ref_strand="+" ref_description="SGN-U572848 Tomato 200607#2 [12 ESTs aligned] (*GB) gi|157334124|emb|CAO22735.1| (e_value=2e-78) unnamed; (*ATH) AT4G21470.1 (e_value=1e-75) | Symbol: ATFMN/FHY | Bifunctional enzyme that catalyzes hydrolysis of FMN to riboflavin, and phosphorylation of riboflavin to FMN. | chr4:11431135-11433332 FORWARD | Aliases: F18E5.90, F18E5_90, ATFMN/FHY; (*SWP) sp|Q969G6|RIFK_HUMAN (e_value=9e-38) Riboflavin kinase OS=Homo sapiens GN=RFK; ">
      <seq>aaccaagaaaaagttgaagtgcttcatcttctcagttcaataatcaattggtgaagttggattataattgctctccatgtctgttgaacgaactttcaagaagctagtttctggtgtcatccttgatttggatggtacacttcttaatacagatggcattgtgagtgagattttaaaggttttcttagttaagtatggaaagcaatgggatgggagagaagctccccacatagtagggaaaaccccaacagaagctgctgctgccgttgttgaagattatgggctgccactgtcaagagatgaatttctttcgcaattttacccaatgctgtctgatcagtggcgcaatatcaaagctcttccaggggccaatcgattgattaaccatttgagcggtcatggtgtacacatggcattggcgtcaaattcttctaaatctaacattgaggccaaaatttttcatcatgcaggtagagttctaacatgtattgctagagaggtatttctttccttaggaaggtattttgtgccagtccagcatgtaagatggcatttatgcttggtgctttgattgggatagtctttattttttttcaggatggaaagagtccttctcagctattgttggaggagatgaagtgaaagctggaaagccgtctccggaaatatttcttgaagcagctaaaagactcaacatggatccatccagctttcttgtcattgaagattcaatatttgcaactagaaaagtggggactacctgcatttcaagataggatagaaggtactttgcctttagaaccttggtatataggtggtcctgtcattaagggatttgggcgcggctcaaaggttctcgggatccccacagctaatttatccccacaaggttattcagccattctttcagaacatccagcgggtgtatattttggatgggcaggactatcaggtcaaggtgtctacaagatggtcatgagcattggttggaatcctttcttcaataacacagagaagacgattgaaccatggttgcttcatgacttcaatgaggacttctatggtgaggaattgcatctagttgttgtgggctacatacggccggaggcaaacttttcgtcacttgaagccttgatagcaaaaattcacgaggacaggaagattgcagaaagagctctcgaacttcctcaatacttgaagtacaaggacgatccataccttaaaagttctctgcatcaagaaaatcaagaaaattgatcattgaagtgttgaagttcattattgttctaattgggattgtatctgtttattctgtcctaattcctcagactacaatagtgtctccccatcaaattgcgtggaatgctctatacaataaaaagataattttttttgaatgtatagctattcagaagttaaagaaccttccagggggtattagtgaatggcaaagggttcaagtgcaggatctttgtactgagaatttcaagttcctgtgtaaatatagagtaatgtaacttgttttctgtctgtttataaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="-" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="25009" stop="19474"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24709" g_stop="24647" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="63" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="24646" i_stop="24009" i_length="638">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24008" g_stop="23920" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="64" r_stop="152" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="23919" i_stop="23323" i_length="597">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="23322" g_stop="23136" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="153" r_stop="339" r_length="187" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="23135" i_stop="22224" i_length="912">
            <donor d_prob="0.764" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="22223" g_stop="21896" g_length="328"/>
          <reference_exon_boundary r_type="cDNA" r_start="340" r_stop="667" r_length="328" r_score="0.997"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="21895" i_stop="21805" i_length="91">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.686" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="21804" g_stop="21739" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="668" r_stop="733" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="21738" i_stop="21078" i_length="661">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="21077" g_stop="21036" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="734" r_stop="775" r_length="42" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="21035" i_stop="20951" i_length="85">
            <donor d_prob="0.903" d_score="1.00"/>
            <acceptor a_prob="0.905" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="20950" g_stop="20855" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="776" r_stop="871" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="20854" i_stop="20577" i_length="278">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.935" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="20576" g_stop="20425" g_length="152"/>
          <reference_exon_boundary r_type="cDNA" r_start="872" r_stop="1023" r_length="152" r_score="0.974"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="20424" i_stop="20348" i_length="77">
            <donor d_prob="0.877" d_score="0.94"/>
            <acceptor a_prob="0.958" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="20347" g_stop="20264" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="1024" r_stop="1107" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="20263" i_stop="20189" i_length="75">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="20188" g_stop="19762" g_length="427"/>
          <reference_exon_boundary r_type="cDNA" r_start="1108" r_stop="1553" r_length="446" r_score="0.859"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="-" ref_id="SGN-U572848" ref_strand="+">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>1534</cumulative_length_of_scored_exons>
        <coverage percentage="0.988" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U572848" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24709" e_stop="24647"/>
          <exon e_start="24008" e_stop="23920"/>
          <exon e_start="23322" e_stop="23136"/>
          <exon e_start="22223" e_stop="21896"/>
          <exon e_start="21804" e_stop="21739"/>
          <exon e_start="21077" e_stop="21036"/>
          <exon e_start="20950" e_stop="20855"/>
          <exon e_start="20576" e_stop="20425"/>
          <exon e_start="20347" e_stop="20264"/>
          <exon e_start="20188" e_stop="19762"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACCAAGAAAAAGTTGAAGTGCTTCATCTTCTCAGTTCAATAATCAATTGGTGAAGTTGGATTGTGAGTATTTACATCATTTAGCTTATTTTATTGATTGGTGATGCAAATTAGCTGATCGTATGTAGAATTTTGTTATTTCAATGTTCAATAATCAATTTGGTTGTTATCCTTGTCACTTCCTGTTTTAAGTTCATTCAGTGATCATTTAATCAAGTTCCCTAAAATTTTTCATGCTTCTCTTGTTTGTTTGAGGCTTTATTTTCTCATGTTATCTCAACCACATAGACAGTAAACGTATTTCTAGAAACTTCCGATCATAGTCCTTAGCGCCCTCTATGGAAGAGCTAAAAGTCTGGCTATGAGAGCGAAAAACTAATACAATTATACAGTTTTGATGACCAGGAAAGTTAAAATGAAATCCAAGTAATAGTAGTTTTGGTTCTGTTGTAATCCATATTAATCGGTTTCATTCCGACAATCTTAGGTGGTTAGCTTGGGCGTTAATGGTATTTTATATTCATAATACATTGTCTAATGACAATCTTCCTTACTTGAATCATGATAAATTGATATTGTATATTGATTTTTATGGTTTACATTTGACTTCAAGATTAAATTCATGTATTTGGATTAATTATTGTGCAAGTATATCTCATATTCACATAACATGAACATAGGTATCTGTTTCTGTGTGGCAGATAATTGCTCTCCATGTCTGTTGAACGAACTTTCAAGAAGCTAGTTTCTGGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAGGTCAGTAGTACTCTTCGTGTTTTGACTTTACACTTCTCAAATTATATTCTTGGCCGTTCACCTAAATCATTCATGGTATTAGTTCTTGATATATGAACTACTACTTTTAATATTCAAAAGCATTTTCTAGAGTTCCTTTCATTTCCTTCCAACTTTTACATATCCAATAGAACTATGAAATTACCAGAATTTTTTGAATATTTGGATGCATATATTTACAATTTGATTTTTGTTACTGCTGTAATCTTTATTCTAAGTGTAGGTTATATCATTGCAGTATAATTGTTTTATCCTTTCAAATTTCTCTAATCAAACTCTATTGTCTGAGGACATACTTAATATGAGGTCTCTGTAAGCTTAGTGGGCCTGCAGCTATTTCGAAATTCGATTCCGAAACTTGAGAAGTACTCTGGCAATCAAGTCTCAAGTATGAACAACTTACAACTATGAAGTCCTCTTTATGCAAAAGAAATTTGGATCTAGGCATTCTGTTATAGAGTTAACTGCAGCACAGTGTCAATCCTTATATTACCAATGTCTTGCGTTTCTTTATAGTTTCAGGTTTCCAATGTTAATTTGATCTCTTTGTTCTGACAGATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCAGTAATAAACCAGCAAACATAGTTTCATTTCCTTTCTGTTTATTGATAAGGCTTATACAAACTGAAATTGAATAACCCATGGGAAGATTATTCGACTTAAAATATTAGTAGGCGGATTCTTTTCGTCATATCCTATTTATGGATGTTAAAGGATAAAGTTACAAATTAAAAACCTTCTGCTCTTTTATAGCTGGAGCATGGATGATAAATTGCAAGCGAGTTAGTAGATAAAAGAGTTGTGGACAACATAGTCCTGCAGTGTTTGTTCTGCTTAAAACCCTTACAAAAAAGTATGTAGGTACTGGATAGTAATTAATATTGTGGAGAATTACTAAACGGGGAACCACTCATTTTGTTCTCCAATTTAGAAAATGCAAATATTCTTGTTTCTTTCTTTCATTTATCTTCTTTGCTTTTGGTGATAAAAATAGATATCCAATGAAGAGCAAAGAAAAAAAGAGGCAAGCAAGAACGGAACAACTACATTAACTTATCAAAAAGAGATAACTACATTTTGTTTATTAGTTGATCATCTGTGTCTTGTATGTCAAACTTGTTTTTTAAAATTTAAATGGAGTGAATTTCCCTTTTTTTCTTTTGTTCATCTGTTTCATTTTGGGGTAGGGGGAGAGGAGGGGAAGGGGTAGAAGCTCTGGAAGGACTAAGAGTGATATACTCATCTATGGCCTTGTTGGTTTAAGGAAGATGATTTCATTCAATCTTGCTGAGAGTGGAAGCAATGTTGGATTGGTGTTACCTTTTTCTTTTCTTTGAGCTAGTAAAACTCTGATTATCTTTTGACTGTTTGCGAGATCTTGTGATGTACAATTATGTAACTTGTATATCTATTCTCTTCTGCATATACATTCCAGTTCAAAGTTCTTATAAAATTTTGTCAATCAATTTGGTATAGGTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAGGTAGAGTTCTAACATGTATTGCTAGAGAGGTATTTCTTTCCTTAGGAAGGTATTTTGTGCCAGTCCAGCATGTAAGATGGCATTTATGCTTGGTGCTTTGATTGGGATAGTCTTTATTTTTTTTCAGGATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAGCCGTCTCCGGAAATGTAAAACTTGATGAATTGATTATCTTTGTCCTCCACATTTCATAATCTGGTATTCTGGATGTTAAATTAACTTAATATCTTCTTTTGTAAGATTTCTTGAAGCAGCTAAAAGACTCAACATGGATCCATCCAGCTTTCTTGTCATTGAAGATTCAATGTGAGTTTTTATCTTCAAAACTTTTGTAGCGGTATGTAGGAAAATCTAACTACTGGTCAAAAGAAGAAAAAAAGAAATGTGCCTGTCGGCTAGATAAGCAGCATGGTTGACTCTAGCTACTAACTTGTGACATCATAATTTACAATTCGGAAAAGGGCCAAAAATACCCTTAGACTATTTGAAAAGGTTCAATGTTACCCCTCATCCACCTATTGGGTTAAAAATACCCCTCAATCCACCTATTTGGTTTGTTTCTACCCTTAAAACTAACAACCTTTTAAAAAAAATTATTATTATTATCACTTATTATTTTTCTTTTTTATTGGATAAATCAAATCCCAACCTATTTAATTTTTTCCTACCCACCCATTTTAGTGTCCATGACCCAAACTCAATTAGAAGAGTTAAAATAACTTGTCATTGCTTTTGCATTTTCTAGGCTGAATATGAACTTTTTTTCTCTCCCAAGAGCATATTATTTTGAATTGGATGTAAATTATTTTATCTCATAACTTAGTGAGAGTAACTCGACCAGATACATATGTTAGACCAGGTGTTACTGCTGGTAAAGATGCTGGAATGGCAGTAGTTGCTGTACCATCTCTTGCAAAGCAGTCTCATCTTTATACCTCTGCTGATGAAGTGATCAATTCTCTTCTAGATTTGCAACTAGAAAAGTGGGGACTACCTGCATTTCAAGATAGTAAGTCTTTATGACTGCTTTACTTGTATGACGTGTAGTCATGTACTTGATTTCTCTTCCAATTTTTGACTGGAAGCATATGCAGGGATAGAAGGTACTTTGCCTTTAGAACCTTGGTATATAGGTGGTCCTGTCATTAAGGGATTTGGGCGCGGCTCAAAGGTTCTCGGGATCCCCACAGGTATGCGGTCTTCTTTATTCCTTCTGCTGAATGGCTAAAATAAATGCTTGACTCGTTATCTGTGTATACTTGAAATGACTTGAGAATTTCTCAGAAGTTTGTTATTGGAATTTCAGTTTCTTGTGAGCCTGTCATATCAGAGATATTGATTTTTATGTCAAATTATTATCTGGATTCGAACTCCAATTGTTGGAGGGGCATGGAAGATTAGTATCTTGCCTCGTATGACTTAACAGTGATGTGTTTTTCTATTCTTATGGGGTCAATATTCTTTTCAGCTAATTTATCCCCACAAGGTTATTCAGCCATTCTTTCAGAACATCCAGCGGGTGTATATTTTGGATGGGCAGGACTATCAGGTCGAGGTGTCTACAAGATGGTCATGAGCATTGGTTGGAATCCTTTCTTCAACAATACAGAGAAGACGGTTGTAAGTGTGTCGTGACATATGTTTCTTCTGTATTCTTGACTTCTTTGGTGTTTGTTGAAAGACAACTTTACTTTTAGGAACCATGGTTGCTTCATGACTTCAATGAGGACTTCTATGGTGAGGAATTGCATCTAGTTGTTGTGGGCTACATACGGCCGGAGGTATTGTGGCCTAGTTACTCTTATTTTTCCCTTTCCTTTCTTACATCACTTGCTGATATTACTGTCTATTTGCAGGCCAACTTTTCGTCACTTGAAGCCTTGATAGCAAAAATTCACGAGGACAGGAAGATTGCAGAAAGAGCTCTCGAACTTCCTCAATACTTGAAGTACAAGGACGATCCATACCTTAAAAGTTCTCTGCATC-----AA-C---AAAATTGATCATTGAAGTGTTGAAGTTCATTATTGTTCTGATTGGGATTGTATCTGTTTATTCTGTCCTAATTCCTCAGACTACAATA--GTCTCCCCATC-AA--------AATGCTCTATACAATAAAAAGATAAAAAGAATTTGAATGTATAGCTATTCAGAAGTTAAAGAACCTTCCAGGGGGTATTAGTGAATGGCAAAGGGTTCAAGTGCAGGATCTTTGTACTGAGAATTTCAAGTTCCTGTGTAAATGTTGATTAATGTAACTTGTTTTCTATCTGTTTATAATATGGAAACATGCA</genome_strand>
        <mrna_strand>AACCAAGAAAAAGTTGAAGTGCTTCATCTTCTCAGTTCAATAATCAATTGGTGAAGTTGGATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATTGCTCTCCATGTCTGTTGAACGAACTTTCAAGAAGCTAGTTTCTGGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACACATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAGGTAGAGTTCTAACATGTATTGCTAGAGAGGTATTTCTTTCCTTAGGAAGGTATTTTGTGCCAGTCCAGCATGTAAGATGGCATTTATGCTTGGTGCTTTGATTGGGATAGTCTTTATTTTTTTTCAGGATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAGCCGTCTCCGGAAAT...........................................................................................ATTTCTTGAAGCAGCTAAAAGACTCAACATGGATCCATCCAGCTTTCTTGTCATTGAAGATTCAAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGCAACTAGAAAAGTGGGGACTACCTGCATTTCAAGATA.....................................................................................GGATAGAAGGTACTTTGCCTTTAGAACCTTGGTATATAGGTGGTCCTGTCATTAAGGGATTTGGGCGCGGCTCAAAGGTTCTCGGGATCCCCACAG......................................................................................................................................................................................................................................................................................CTAATTTATCCCCACAAGGTTATTCAGCCATTCTTTCAGAACATCCAGCGGGTGTATATTTTGGATGGGCAGGACTATCAGGTCAAGGTGTCTACAAGATGGTCATGAGCATTGGTTGGAATCCTTTCTTCAATAACACAGAGAAGACGATT.............................................................................GAACCATGGTTGCTTCATGACTTCAATGAGGACTTCTATGGTGAGGAATTGCATCTAGTTGTTGTGGGCTACATACGGCCGGAG...........................................................................GCAAACTTTTCGTCACTTGAAGCCTTGATAGCAAAAATTCACGAGGACAGGAAGATTGCAGAAAGAGCTCTCGAACTTCCTCAATACTTGAAGTACAAGGACGATCCATACCTTAAAAGTTCTCTGCATCAAGAAAATCAAGAAAATTGATCATTGAAGTGTTGAAGTTCATTATTGTTCTAATTGGGATTGTATCTGTTTATTCTGTCCTAATTCCTCAGACTACAATAGTGTCTCCCCATCAAATTGCGTGGAATGCTCTATACAATAAAAAGAT-AATTTTTTTTGAATGTATAGCTATTCAGAAGTTAAAGAACCTTCCAGGGGGTATTAGTGAATGGCAAAGGGTTCAAGTGCAGGATCTTTGTACTGAGAATTTCAAGTTCCTGTGTAAATATAGAGTAATGTAACTTGTTTTCTGTCTGTTTATAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U572849" ref_strand="+" ref_description="SGN-U572849 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|147846786|emb|CAN78503.1| (e_value=1e-27) hypothetical; (*ATH) AT4G21470.1 (e_value=4e-26) | Symbol: ATFMN/FHY | Bifunctional enzyme that catalyzes hydrolysis of FMN to riboflavin, and phosphorylation of riboflavin to FMN. | chr4:11431135-11433332 FORWARD | Aliases: F18E5.90, F18E5_90, ATFMN/FHY; (*SWP) sp|O76206|RIFK_DROME (e_value=1e-11) Putative riboflavin kinase OS=Drosophila melanogaster GN=anon-84Ea; ">
      <seq>tcgggatccccacaggtatgcggtcttctttattccttctgctgaatggctaaaataaatgcttgactcgttatctgtgtatacttgaaatgacttgagaatttctcagaagtttgttattggaatttcagtttcttgtgagcctgtcatatcagagatattgatttttatgtcaaattattatctggattcgaactccaattgttggaggggcatggaagattagtatcttgcctcgtatgacttaacagtgatgtgtttttctattcttatggggtcaatattcttttcagctaatttatccccacaaggttattcagccattctttcagaacatccagcgggtgtatattttggatgggcaggactatcaggtcgaggtgtctacaagatggtcatgagcattggttggaatcctttcttcaacaatacagagaagacggttgtaagtgtgtcgggacatatgtttcttctgtattcttgacttctttggtgtttgttgaaagacaactttacttttaggaaccatggttgcttcatgacttcaatgaggacttctatggtgaggaattgcatctagttgttgtgggctacat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="-" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="21169" stop="19974"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20869" g_stop="20274" g_length="596"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="596" r_length="596" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="-" ref_id="SGN-U572849" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>596</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U572849" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20869" e_stop="20274"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGGGATCCCCACAGGTATGCGGTCTTCTTTATTCCTTCTGCTGAATGGCTAAAATAAATGCTTGACTCGTTATCTGTGTATACTTGAAATGACTTGAGAATTTCTCAGAAGTTTGTTATTGGAATTTCAGTTTCTTGTGAGCCTGTCATATCAGAGATATTGATTTTTATGTCAAATTATTATCTGGATTCGAACTCCAATTGTTGGAGGGGCATGGAAGATTAGTATCTTGCCTCGTATGACTTAACAGTGATGTGTTTTTCTATTCTTATGGGGTCAATATTCTTTTCAGCTAATTTATCCCCACAAGGTTATTCAGCCATTCTTTCAGAACATCCAGCGGGTGTATATTTTGGATGGGCAGGACTATCAGGTCGAGGTGTCTACAAGATGGTCATGAGCATTGGTTGGAATCCTTTCTTCAACAATACAGAGAAGACGGTTGTAAGTGTGTCGTGACATATGTTTCTTCTGTATTCTTGACTTCTTTGGTGTTTGTTGAAAGACAACTTTACTTTTAGGAACCATGGTTGCTTCATGACTTCAATGAGGACTTCTATGGTGAGGAATTGCATCTAGTTGTTGTGGGCTACAT</genome_strand>
        <mrna_strand>TCGGGATCCCCACAGGTATGCGGTCTTCTTTATTCCTTCTGCTGAATGGCTAAAATAAATGCTTGACTCGTTATCTGTGTATACTTGAAATGACTTGAGAATTTCTCAGAAGTTTGTTATTGGAATTTCAGTTTCTTGTGAGCCTGTCATATCAGAGATATTGATTTTTATGTCAAATTATTATCTGGATTCGAACTCCAATTGTTGGAGGGGCATGGAAGATTAGTATCTTGCCTCGTATGACTTAACAGTGATGTGTTTTTCTATTCTTATGGGGTCAATATTCTTTTCAGCTAATTTATCCCCACAAGGTTATTCAGCCATTCTTTCAGAACATCCAGCGGGTGTATATTTTGGATGGGCAGGACTATCAGGTCGAGGTGTCTACAAGATGGTCATGAGCATTGGTTGGAATCCTTTCTTCAACAATACAGAGAAGACGGTTGTAAGTGTGTCGGGACATATGTTTCTTCTGTATTCTTGACTTCTTTGGTGTTTGTTGAAAGACAACTTTACTTTTAGGAACCATGGTTGCTTCATGACTTCAATGAGGACTTCTATGGTGAGGAATTGCATCTAGTTGTTGTGGGCTACAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U587889" ref_strand="+" ref_description="SGN-U587889 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157327889|emb|CAO16601.1| (e_value=5e-12) unnamed; (*ATH) AT4G21470.1 (e_value=2e-11) | Symbol: ATFMN/FHY | Bifunctional enzyme that catalyzes hydrolysis of FMN to riboflavin, and phosphorylation of riboflavin to FMN. | chr4:11431135-11433332 FORWARD | Aliases: F18E5.90, F18E5_90, ATFMN/FHY; ">
      <seq>ctgtggcgcaatatcaaaattcttccaggggccaatcgattgattaaccatttgagcggtcatggtgtacccatggcatagtcgtaaaattcttctaactctaacagcgaggccaaaatttcctatcatgcaggagggaaagagtccttctcatctattgttggaggagatgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="-" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="22523" stop="21625"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22225" g_stop="22093" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="133" r_length="133" r_score="0.902"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="22092" i_stop="21966" i_length="127">
            <donor d_prob="0.602" d_score="0.86"/>
            <acceptor a_prob="0.991" a_score="0.95"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="21965" g_stop="21925" g_length="41"/>
          <reference_exon_boundary r_type="cDNA" r_start="134" r_stop="174" r_length="41" r_score="0.951"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="-" ref_id="SGN-U587889" ref_strand="+">
        <total_alignment_score>0.902</total_alignment_score>
        <cumulative_length_of_scored_exons>174</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U587889" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22225" e_stop="22093"/>
          <exon e_start="21965" e_stop="21925"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAGGTAGAGTTCTAACATGTATTGCTAGAGAGGTATTTCTTTCCTTAGGAAGGTATTTTGTGCCAGTCCAGCATGTAAGATGGCATTTATGCTTGGTGCTTTGATTGGGATAGTCTTTATTTTTTTTCAGGATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAA</genome_strand>
        <mrna_strand>CTGTGGCGCAATATCAAAATTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATAGTCGTAAAATTCTTCTAACTCTAACAGCGAGGCCAAAATTTCCTATCATGCAG...............................................................................................................................GAGGGAAAGAGTCCTTCTCATCTATTGTTGGAGGAGATGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U581277" ref_strand="+" ref_description="SGN-U581277 Tomato 200607#2 [66 ESTs aligned] (*GB) gi|118482076|gb|ABK92969.1| (e_value=2e-38) unknown; (*ATH) AT1G66070.1 (e_value=4e-36)  Symbol: None | translation initiation factor-related, similar to Eukaryotic translation initiation factor 3 subunit 1 (eIF-3 alpha) (eIF3 p35) (eIF3j) (Swiss-Prot:O75822) (Homo sapiens) | chr1:24599549-24602181 REVERSE | Aliases: F15E12.10, F15E12_1... ; ">
      <seq>ttgactgcttgtttttctttctccatcttggactgcttgagccaagggcattttggtcatcagaaacgctgcttcacattctgctattgcttaaccatttttcatcagatttgttcacctctggttatctctcttcccatatactcgaacttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgttgaaagggcaagatgctaaagacattggttcttctattactgcatttgcaaatgagaagattaaagcagaaaaggaagccactgcgagtaaaaagaagacaggtgcaaagaagaagcagctacatgttgataaggcagatgatgatgcagtagtaaatgcatatgatggttatgatgattatgatttcatgtgaagagggggaaacttagcaaagacaggcatgttaggccgtttttttcacctttctagctacatcagtctggagatcttttgaatctactagtgacaactacgaggaagatcttggggccatgttacctccctattctggagtcttattgagtgtgtcatatctttttctttctgttccgtcgggtcaaataagaaagtatcctttgttttgtttacattttgtggtcagttactggttggagatccgttggtaaatgatttgtcggttgatctgcattctcttgtatgattcagatctcagattttggacctatagatttcatgtaactgtcttattcaaaactatttgatcctttcttttcaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="49059" stop="56256"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49359" g_stop="49498" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="140" r_length="140" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="49499" i_stop="50703" i_length="1205">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50704" g_stop="50764" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="141" r_stop="201" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="50765" i_stop="52408" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52409" g_stop="52527" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="202" r_stop="320" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="52528" i_stop="54747" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="54748" g_stop="54881" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="321" r_stop="454" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="54882" i_stop="55020" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="55021" g_stop="55171" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="455" r_stop="605" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="55172" i_stop="55265" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="55266" g_stop="55425" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="606" r_stop="765" r_length="160" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="55426" i_stop="55500" i_length="75">
            <donor d_prob="0.802" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="55501" g_stop="55957" g_length="457"/>
          <reference_exon_boundary r_type="cDNA" r_start="766" r_stop="1222" r_length="457" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-U581277" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1222</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U581277" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49359" e_stop="49498"/>
          <exon e_start="50704" e_stop="50764"/>
          <exon e_start="52409" e_stop="52527"/>
          <exon e_start="54748" e_stop="54881"/>
          <exon e_start="55021" e_stop="55171"/>
          <exon e_start="55266" e_stop="55425"/>
          <exon e_start="55501" e_stop="55957"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGACTGCTTGTTTTTCTTTCTCCATCTTGGACTGCTTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCATGTAAGTTTCTCCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGTTATGTTTTTTGGCAAGTCTGTATGTGTGGATAATAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTTTATTGACACTTTGTTATGGTTTTTGACTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGATTGAGGTGATTTTCTTGATTAATATTGGAGTTCCATTGACTTTGTGTTATGGTTTTTGACAAGTTTGTGTGTGTGGGTATTAATAGAATCTTGGGAGCAAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTTTGTTATGAGTTTTGGCAAGTCTGTATGTGTGGGTATTAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTATATTGACACTTTGTTATGGTTTTTGATTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGCGATGTTCTTGATTAATCTTGGAGTTCTATTTGCATAATTGAATGATTTGATTTTCCTGTATATTAATGATTTGATTAAAAAGGTTTCTGTTGCTGATATTTTGGTTTCTCTGGAAAAAGAACTGACTTTTGTCTACTGCTTATTCAGATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTACGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAGGTAGCGCTGTGCTTGCTTTCTTTCTATGATAATTGTGTCATCTATTGGTAGGGTTTGTGACTTTTTTCCGTACAGGTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGCATGTTAGGCCGTTTTTTTCACCTTTCTAGCTACATCAGTCTGGAGATCTTTTGAATCTACTAGTGACAACTACGAGGAAGATCTTGGGGCCATGTTACCTCCCTATTCTGGAGTCTTATTGAGTGTGTCATATCTTTTTCTTTCTGTTCCGTCGGGTCAAATAAGAAAGTATCCTTTGTTTTGTTTACATTTTGTGGTCAGTTACTGGTTGGAGATCCGTTGGTAAATGATTTGTCGGTTGATCTGCATTCTCTTGTATGATTCAGATCTCAGATTTTGGACCTATAGATTTCATGTAACTGTCTTATTCAAAACTATTTGATCCTTTCTTTTCATAT</genome_strand>
        <mrna_strand>TTGACTGCTTGTTTTTCTTTCTCCATCTTGGACTGCTTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAG...........................................................................GTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGCATGTTAGGCCGTTTTTTTCACCTTTCTAGCTACATCAGTCTGGAGATCTTTTGAATCTACTAGTGACAACTACGAGGAAGATCTTGGGGCCATGTTACCTCCCTATTCTGGAGTCTTATTGAGTGTGTCATATCTTTTTCTTTCTGTTCCGTCGGGTCAAATAAGAAAGTATCCTTTGTTTTGTTTACATTTTGTGGTCAGTTACTGGTTGGAGATCCGTTGGTAAATGATTTGTCGGTTGATCTGCATTCTCTTGTATGATTCAGATCTCAGATTTTGGACCTATAGATTTCATGTAACTGTCTTATTCAAAACTATTTGATCCTTTCTTTTCAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U580250" ref_strand="+" ref_description="SGN-U580250 Tomato 200607#2 [2 ESTs aligned] ">
      <seq>gcttgagccaagggcattttggtcatcagaaacgctgcttcacattctgctattgcttaaccatttttcatcagatttgttcacctctggttatctctcttcccatatactcgaacttaacaagtttttgtggacggaagagaattaactggagatggaggattggggtgtcaagaagatgcaaaaggtacaaaagagagatgcatccaaagaaactatattagatttagggagctaaagtccaaaacagaccagtgcaatttgaggtgctccaactaattaaccaggcatctagcttttgaagagtggacggatttgagattccatcaaaacatatacggttctaactgtgtaagtacaccaaaagatattcacagggatcataatccggatctcctctgactttaaaacttcatcaactccaagattcatagacttctgtgactctctgtggtatgaccctattgacttcaaaatagagtagaacgattcctcaagtcagcaacaattttgttttagccttatatatgctttgtcatcactcacaccacaacagggttttgtgtgtggcagaaatgaaacggaataaacaataatctaagaattcatctcactaatcaatggtaagctgcttatgctgtctctattgtggtaagcgtttaataatacttgcttctggattgtctaagtgctcagcctattcacttgaactcactggttcattttttagcatagcatttacaagaagcaactaccattgtaactggttgactgttcacagtaattggaataaaaccatagatgttggttccctatttctggagattttgcttgttcaaaccagtttatttttgggtttgattcatttgtctttctgagaagacttggattcccctctcatgggacattga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="49093" stop="52537"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49393" g_stop="49498" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="106" r_length="106" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="49499" i_stop="50703" i_length="1205">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50704" g_stop="50764" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="107" r_stop="167" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="50765" i_stop="51493" i_length="729">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.821" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="51494" g_stop="52237" g_length="744"/>
          <reference_exon_boundary r_type="cDNA" r_start="168" r_stop="911" r_length="744" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-U580250" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>911</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U580250" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49393" e_stop="49498"/>
          <exon e_start="50704" e_stop="50764"/>
          <exon e_start="51494" e_stop="52237"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCATGTAAGTTTCTCCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGTTATGTTTTTTGGCAAGTCTGTATGTGTGGATAATAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTTTATTGACACTTTGTTATGGTTTTTGACTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGATTGAGGTGATTTTCTTGATTAATATTGGAGTTCCATTGACTTTGTGTTATGGTTTTTGACAAGTTTGTGTGTGTGGGTATTAATAGAATCTTGGGAGCAAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTTTGTTATGAGTTTTGGCAAGTCTGTATGTGTGGGTATTAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTATATTGACACTTTGTTATGGTTTTTGATTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGCGATGTTCTTGATTAATCTTGGAGTTCTATTTGCATAATTGAATGATTTGATTTTCCTGTATATTAATGATTTGATTAAAAAGGTTTCTGTTGCTGATATTTTGGTTTCTCTGGAAAAAGAACTGACTTTTGTCTACTGCTTATTCAGATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGA</genome_strand>
        <mrna_strand>GCTTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCCTCTCATGGGACATTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U567652" ref_strand="+" ref_description="SGN-U567652 Tomato 200607#2 [3 ESTs aligned] ">
      <seq>gcttcttcatctattgggttattgctctgtttttggtttattcgttcaatcttgtttcttggttcaatttattgtttttctctgcgattggcgtcttcggaggtatatatatgcgtcagtatttgagtcgcacgcatcatatcatatattcttgtgtctatgaacggaaattagggctttcggatttgtaacttttgagaactgatttagtggcggttttagggttcagccgcctttgccgaccttttatacaatgtccgaccgactcgaacactgatgttaattgacacttttttcttccactgttttatggtttttgacaagtctctgtgtgtgtaggtattgatataatttgggcagcgaggtgatgttcttgattaatattggcgttttattgacactgtgttatggtttttgacaattttgtatgtgtgggtattgatagaatcttgggagtgaggtgaatttcttgattaatattggagttccattgacattgtgttatggtttttgacaagtttgtatgtgtgggtattaatagaatcttgggagcgaggtgattttcttgattagtattggggttccattgacattgtggtatgtttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="49210" stop="50414"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49509" g_stop="50114" g_length="606"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="606" r_length="606" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-U567652" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>606</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U567652" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49509" e_stop="50114"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGTTATGTTTT</genome_strand>
        <mrna_strand>GCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGGTATGTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U593081" ref_strand="+" ref_description="SGN-U593081 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>ctcgaacttaacaagtttttgtggacggcatataattaactggatatggaggagggggaggatataccatttccagatctacttaagaaggatcagccaacacgtaaatgggatgatgaagatgcatatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgcttctgcacctaaaccagaacctactgctgagaaggccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="50407" stop="55081"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50707" g_stop="50764" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="58" r_length="58" r_score="0.897"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="50765" i_stop="52408" i_length="1644">
            <donor d_prob="0.844" d_score="0.88"/>
            <acceptor a_prob="0.953" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52409" g_stop="52527" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="59" r_stop="177" r_length="119" r_score="0.958"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="52528" i_stop="54747" i_length="2220">
            <donor d_prob="0.992" d_score="0.96"/>
            <acceptor a_prob="0.984" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="54748" g_stop="54781" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="178" r_stop="211" r_length="34" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-U593081" ref_strand="+">
        <total_alignment_score>0.938</total_alignment_score>
        <cumulative_length_of_scored_exons>211</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U593081" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50707" e_stop="50764"/>
          <exon e_start="52409" e_stop="52527"/>
          <exon e_start="54748" e_stop="54781"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTACGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCC</genome_strand>
        <mrna_strand>CTCGAACTTAACAAGTTTTTGTGGACGGCATATAATTAACTGGATATGGAGGAGGGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCATTTCCAGATCTACTTAAGAAGGATCAGCCAACACGTAAATGGGATGATGAAGATGCATATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTTCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTACTGCTGAGAAGGCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U562818" ref_strand="+" ref_description="SGN-U562818 Tomato 200607#2 [4 ESTs aligned] (*GB) gi|145340483|ref|NP_193884.3| (e_value=2e-123) nucleotide; (*ATH) AT4G21530.1 (e_value=1e-125)  Symbol: None | transducin family protein / WD-40 repeat family protein, contains 1 WD-40 repeat (PF00400); similar to anaphase-promoting complex subunit 4 GI:6180011 (Homo sapiens); supported by EST GB:AU237382 | chr4:11450583-11454082 FORWARD | Ali... ; (*SWP) sp|Q91W96|APC4_MOUSE (e_value=6e-16) Anaphase-promoting complex subunit 4 OS=Mus musculus GN=Anapc4; ">
      <seq>aggaagaaaaacccaaaaccccgccctcttcagctgagtagcagcgatggaaactgatgaaaaccagcggattcttccatttcagcttcagttcgacaaacccattgcttctcagattaaaattgctgaatggaatccagaaaaagatttacttgctatggttacagaagactccaaggttctacttcatcgtttcaattggcaaaggctctggactgttactcccggaaagaacataacttccatatgttggcgtcctgatgggaaagcaattgcagttgggcttgaagatgggaccatctccttgcatgatgtagaaaatggaaagctgctgcgaaacataaaatcccactcggctgatgtcgtgtgtctccattgggaggaggatgggaagaaggacatgaacagtaatacctccagttatgaagatcgaacttcacggttctttcctcctccccctagagttcctaagatgcctggacttgtacctggggatagtggcttcatggatgatggagaggattctttccaggagctatcaaattcttcacatcaaagatataacattttatgtagcggggacaaggatggaagtatctgcttcaatatctttggcatatttccaatagggacagttaatatacacaaccttgttgtctccagttcactctcaagcagcaatgttgctagccgacttctgaatgcttccatttgtaaggtggccttgtccaaagatctttgccatttagtagttttgtgcaatggggagctgatcacagatgaggttgatcaaggtgaaggacatcatgggttacttggctttcactgcttagtcctcaatacttcaatattttccaaaaggaaaactgaacttcaccaggttgcccaacaggcttccaacattgaagatctgagtgaagtcatccggacatcactatcagtcatgtctaaaatatggtccgatgctatgcatacatttcacgagaagttcaatgctgtatccacattgatcgctgatcatggacttgactctactcctcaggatgagtttctaagccttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="56723" stop="63389"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57023" g_stop="57137" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="115" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="57138" i_stop="57221" i_length="84">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="57222" g_stop="57333" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="116" r_stop="227" r_length="112" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="57334" i_stop="57780" i_length="447">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.882" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="57781" g_stop="57872" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="228" r_stop="319" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="57873" i_stop="58764" i_length="892">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="58765" g_stop="58842" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="320" r_stop="397" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="58843" i_stop="59586" i_length="744">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.959" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="59587" g_stop="59826" g_length="240"/>
          <reference_exon_boundary r_type="cDNA" r_start="398" r_stop="637" r_length="240" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="59827" i_stop="59955" i_length="129">
            <donor d_prob="0.838" d_score="1.00"/>
            <acceptor a_prob="0.144" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="59956" g_stop="60036" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="638" r_stop="718" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="60037" i_stop="60488" i_length="452">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.859" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="60489" g_stop="60631" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="719" r_stop="861" r_length="143" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="60632" i_stop="62802" i_length="2171">
            <donor d_prob="0.942" d_score="1.00"/>
            <acceptor a_prob="0.859" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="62803" g_stop="62963" g_length="161"/>
          <reference_exon_boundary r_type="cDNA" r_start="862" r_stop="1022" r_length="161" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="62964" i_stop="63050" i_length="87">
            <donor d_prob="0.743" d_score="1.00"/>
            <acceptor a_prob="0.904" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="63051" g_stop="63089" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="1023" r_stop="1061" r_length="39" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-U562818" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1061</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U562818" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57023" e_stop="57137"/>
          <exon e_start="57222" e_stop="57333"/>
          <exon e_start="57781" e_stop="57872"/>
          <exon e_start="58765" e_stop="58842"/>
          <exon e_start="59587" e_stop="59826"/>
          <exon e_start="59956" e_stop="60036"/>
          <exon e_start="60489" e_stop="60631"/>
          <exon e_start="62803" e_stop="62963"/>
          <exon e_start="63051" e_stop="63089"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGAAGAAAAACCCAAAACCCCGCCCTCTTCAGCTGAGTAGCAGCGATGGAAACTGATGAAAACCAGCGGATTCTTCCATTTCAGCTTCAGTTCGACAAACCCATTGCTTCTCAGGTCCGACTGTATTCACTTATGTATTGTAAAATTGCTTAAATGATGATTGTTTTCAAATTTGTTTTGGGTGTATGTATTTTGCAGATTAAAATTGCTGAATGGAATCCAGAAAAAGATTTACTTGCTATGGTTACAGAAGACTCCAAGGTTCTACTTCATCGTTTCAATTGGCAAAGGCTCTGGACTGTTACTCCCGGTACCCTTTTTTTACATTCATCCCTCAACATGCGATGCCAGAGCTCGTAAAATTTGTAAAGATTATTTTTCTCCTAGGAATGGTTGAATAATACTTATTTTCTGACATCTGTACTTATGGTTGGCTGATGTACTAGTTGAACTTCGTGCAAACTGACCATATAGAAGTTTTTTTTTTTGTTTGTGTGAATTGTTTCTATAGTAAGTAAAATTCAGTAATAGATGTTTTATCGTTTGGCTGCTTGGATGATTTTCTTGTGAAAGGTAGGGACTGATTTGATATATTCCTCATAAGAGGGGAAAATTAGACTGCTATCATAATCTAGAAAATTGATCCTATCCCATGTTCAATTCAACACGTTTGGTCCTTTTTCAGTGCCAAAGATGTTAATTTGCAACATCAATCTCCTAATCTTAATTCTCCACTAATGAAATATCTATCTTTTAGGAAAGAACATAACTTCCATATGTTGGCGTCCTGATGGGAAAGCAATTGCAGTTGGGCTTGAAGATGGGACCATCTCCTTGCATGATGTAGAAGTGAGTTTGATCATATAAACGATGCTTTTCTTAGTGCATGTAGCTGTTGGTTTAAGTATGTCATGAATCTGTTTAAGCAAAATATGATAGTTGCAGGATCAAAGATATTTACCGTTCGATGATCTTATAAATTCCTTGGATTATTTCATTTCTTACTCATAAAAACAAAGAAGTAAGTTATGCCATGAGGTAGCAAATAATTATTTGAAAATAAATCACTTGATAAGATAAATTTATCCAATGGTTTTCAAACTTCTCTTGCTCGGTCTAAGTTGTTGCCATTTTCCATCTGCAATATTTGCATCCTTGTCACTATTTGCTAGATACCTACACCTGCTGTCTTCCCTGAAAGAAGTTGTACTACCCTACTTTGGAATTTGTAATGCAGAAGATATTTCTTCTCCTTTTAGAAAACTTATAGATTGTTCTTTCCCTGTAAACCTTTTAAAAGCTTTTAGTGAAGGTACACCACTATAAGTGTTCATTAAACATATCTTATAAGATATTGCATCTTGCAATGATGTGATAAAAACTTATTTGAGGATCTTATATATGTAACTTCAATGTGCATTACTTGTTTTGTATTCTACAGAAGAATACAGCACTAGTTATCTCTTGAGCATTATATTTGATGAAGAGCCTAAAACTACTTTGTTTATTTAGCTGCAAATTAGAAAAAATCCACTATGGTGACACTGAGTAATTTGCTAAAAAATATTTTTTTTCAAGAGCTTGGTGGATTTCATTAGGATTAGGTTGAGTGAGAAGAATTCCATTTTGTTGGCTTGAGCCTTTAAGTTAAGATTTGTCCCTGTCAATTAGAACATTATTGGTTCATTCTCCTGTATGTTTTCTGTACATACTGTTTTCTCATTAGTCTGTTCCCTTGCAGAATGGAAAGCTGCTGCGAAACATAAAATCCCACTCGGCTGATGTCGTGTGTCTCCATTGGGAGGAGGATGGGAAGAAGGTTTTACTTTTTGTTCAAACTTCTGACAGACTACTTTTCCATGGTTAATAGTAGTGCAAGTTTATTCAAGTTTAATGCAAGTTATTTATCATGCAAGGATTAAACGTCAGCCAGTTGAGGTCTGACTTGTTCATTTGTGAACTAAACTGCACTATTTCAATTACATTGAGTAAAGGAAAATAGTTCCTTATGTGAAAATATATTGAAAATTAAAGCCAAACTGCCCTCTCTTTCTCGTATTGAGAAAATCCATTTCTACCACAGCAGCCAGTTAACATCCATTTTTTAAATCTGAAAGTGAAAAGTCATTTAGCGTCCACCTGCAGATTCAGTTTATGCTCCATGATGAAGCCATTCTTGATTTGTTTTAATCTCTAATTAACTCAAAGAAGCTTAAAGAGTTGTTTAGCCTTCTTGCTGGATTGAACTTCCGCTAGTTGTATCTCTAGTTCCAAGATCAAACGAATTGTCTCAGACTGTTAGTGTGCAGTATAATTCTGTTGGGGAACTGCATGTTTTGATCTTTGTTATCTCTGTTAAGGTGTCGTAGCAAATTTTACGGTGGAACAGATGACTTGCAGGGAGTTGCTGCCTTATGTAGAGCCTGAAACTTTATGCTATGATACTTATTAGTTCGGAGGGTTCTGGATATGTTTTGGGTGCTTTGCTTTCTGTGCCTTCTTAAATCTTGATACTTTTGTTTCACCTTTCCTGACCTTGTAACTCTTATCTCCTGGAATTTAGGACATGAACAGTAATACCTCCAGTTATGAAGATCGAACTTCACGGTTCTTTCCTCCTCCCCCTAGAGTTCCTAAGATGCCTGGACTTGTACCTGGGGATAGTGGCTTCATGGATGATGGAGAGGATTCTTTCCAGGAGCTATCAAATTCTTCACATCAAAGATATAACATTTTATGTAGCGGGGACAAGGATGGAAGTATCTGCTTCAATATCTTTGGCATATTTCCAATAGGGACAGTTGTAAGTTGTTTGTCTTCATTAAAGATGTTTTGGTTTTTTAAAAAAAATATATTTTCATTTCACCTGTCTCTTTGACTAATTGTCTGATATTTATTTCTATTATGTGGATTACTTGGACTTACTCGCTAGAATATACACAACCTTGTTGTCTCCAGTTCACTCTCAAGCAGCAATGTTGCTAGCCGACTTCTGAATGCTTCCATTTGTAAGGTATGTTTACTTTGTTGTCAACGGTCTTATGATATCTTAGTAGTCCAAAGGTTGAAGTATTGATGTCTTGTTCAACGATGCATTTTGCTATATCCTGCTTATTCACATCAATATTTTCTTTTAGTTTCCATTTCAAATAATTTCGTTGGAATTGATACCTGGAAGGTCACAGAACAGTCTCAAACATCACAAAACAATAGTGATAAAAGTAGTAATAGTAATTTAAAAAGAAAAATAGCGATAAAGATAAAAGATGCTTATGCAGAATCAGCTTTTGTTGCTCAAAAGATTTAGTGTAAGTGTGTAACACATTCCAAAAAATGATGACACCTTTAGGAATCAGGTATTGGCACTTTTCATGTGACTTGTCAGGAGAATTTTTTTGCATAGATTGTGCCAAATTCATGCCTTATTCCTATTCATTGTTCTCACTATGTATGATGTCATTGAAGGTGGCCTTGTCCAAAGATCTTTGCCATTTAGTAGTTTTGTGCAATGGGGAGCTGATCACAGATGAGGTTGATCAAGGTGAAGGACATCATGGGTTACTTGGCTTTCACTGCTTAGTCCTCAATACTTCAATATTTTCCAAAAGGTAATTGTAAAGCGAAACTTTATGAATTTTCATCTCCTGTTTTAAGATGTGAATATTCTCTATTTTGCAGCAACCAGCAATTGTTGTTTCTGAGACAATCGTCATAGATGATGATTATAGAGATGATTTGAATTTTACTTGGATCGACTTTATGGGAAATTAAAAATGAAGGACTTGAATATTGGAGATAGAAGTGCTGGAAAATATTGTTTCAAGGATTAAAATAAATAGAACAAAAAGGGAAATTTGACAGGGTAGAATGTAGCATATATGTGACACGTGTTTTTGAGGGTACGATGTGCTTAGATTTTCTACGAGTGGCTCAGTGTGTCACTGCTAAAAGGGATATTAGGCGTCATTAATTTGTACAAGGAGCATAGGCTTCCAGTTCAGTGAGATTAGGCAGAAAAAGTAGTCCGACGCAAAAGAGAGATTAGGGAGAAAAGTAAAATCAATTTAGAGAGCGCCTTGAGCTAATAAGTTTTGATAGCTATGACCCATGAAGTTAAAGGGTATCTGAGAGGTACATATATAGAAGTTGGTTGATTGGAGGGAAGCTACTTGGAAGAAGAGGGACACTCTCCAGAAAGAATGGGCTTTGCTACAACAATTAGAATTTGTTTCTCTTTCAGTCTTTCATTAAGGCTTCATAGATGTTAGTTGGATGGGTCTTTTTGATATTAGTATGGGTACTCATACGGCATTCATGAATGAGTCTTGTATTTTTGTTAAAGCCAAAGATAGCCAAGTACTTTTGTTTTGATTATCTTGATTTGATTTAATAATAGAAATCCTTAAAGAAGAAAAAATATAAGTAGTTAATTTAGAATTTCCTGTCCTTGGAGAGAAGCAAAAACAAAGAGAATTCAGCGGAGGCAAAAGAACTAGGTGATTCTTCCCATCTATCTAGCCTTGGTGGATAGAGTTATCTGAACCTTTTGCTGGTGGGAGGTGGCGGTATCCCGTGGAATCAGTTCAGGTGCATGAAAGTTGACCTGGACACCACAGTCATATAAAAACAAGAAAGAGAAATTGTATGAGAGTAATATATAGTTATTGTATGTACTGAGTATTGGTTGCGAATAGTATGTCGTTGGTTTGCTTGATGGAAGTTGAAGGCATCGGATGCCGTTCATGTGCTGCTCATCCATTGGGGCGTGATAACGTTTGTTGGGGTGATGTTGATAGTAATCAAAACATTATTACTTTCCGTGGGACTTGGCTACATTTGGCGCATAGACCTTTCCAACATGGAGTTAGAATATTCAGACATGCTTAGAGGCTTATGGCTCTCTGTCAAGAGGAAGCAAAGTTGTGGATTTGATGGGCTATTTGATGGATTCGAACATACCTACACTCACCTTGCTAAGTAGGTCAAGATAGGGTGGTGTAGGGCCTGAAAGGACATGCCTCTGTCTATGACTCCTGGCTCCCAGCAGAGTAGTTCACATCAACAACATACCTAGTGAAATTCCACAAGTGGGGTGTGGGAGGGTAGAGTGCACGAAGACCTTACCACTATCTCATGGAGAGTAGTTTACATAAGTATAGTAATATGAAGACTGGAGAATATATCCCAGGTTTGGTTTGATCCCTTCATTTTAAATAATGGACTTCTCCAACATTTTTTCTCACAGTAGTGCTCCAAAAGTTTCTTGGGTTTCCTGGAAATGAGATTGAGTGCCTTATTATTTTCTCTCACCAATTGCTGGTCCTTGTTGGATAAGAGGACTTAGCTCCTTCAGGTCGGGGCTTTCAGTTGAGGATTTTCTGTGGATCTACTCCTTTTTACATTAAGATGAAAAGTGTCCTTTTGGTGGAGCTAGTTGCATGTATAAATATGAAGCAGCCGAATCTTATCCTTATTTAGCAGAGGATGTTGGAAGGGTTGGGCAAAGCACTTAATATGGAGCTATAGTGTGTTGCCATGAAGGTGTGCAAATTTATCAGGCAAATTCAGGCTTAGCACCTGCAAACTCTTTATTACTGTGATTTGCATTTGACCATTCATAATCACAATTGCAATATATGTTTTCATGCTAACAAAGATTCTTACAATCATACTTGGATACAGACATGGTTTTGATTTTCCCTTAAACTGCTTGAACTGTGTTCTATTGATTCGAGTTTATTTGGCATGTATGTTAACTGCTGTAACCAACCAACCTCAGGAAAACTGAACTTCACCAGGTTGCCCAACAGGCTTCCAACATTGAAGATCTGAGTGAAGTCATCCGGACATCACTATCAGTCATGTCTAAAATATGGTCCGATGCTATGCATACATTTCACGAGAAGTTCAATGCTGTATCCACATTGATCGCTGATCATGGTAATGCTCAAAATCCAAAACTCAACCTTAATGGTTTCCTTCTCTTCTGCGTTGATGTTAAACTTCTGTTTTCCATTTTTCGCCTAGGACTTGACTCTACTCCTCAGGATGAGTTTCTAAGCCTTT</genome_strand>
        <mrna_strand>AGGAAGAAAAACCCAAAACCCCGCCCTCTTCAGCTGAGTAGCAGCGATGGAAACTGATGAAAACCAGCGGATTCTTCCATTTCAGCTTCAGTTCGACAAACCCATTGCTTCTCAG....................................................................................ATTAAAATTGCTGAATGGAATCCAGAAAAAGATTTACTTGCTATGGTTACAGAAGACTCCAAGGTTCTACTTCATCGTTTCAATTGGCAAAGGCTCTGGACTGTTACTCCCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGAACATAACTTCCATATGTTGGCGTCCTGATGGGAAAGCAATTGCAGTTGGGCTTGAAGATGGGACCATCTCCTTGCATGATGTAGAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGAAAGCTGCTGCGAAACATAAAATCCCACTCGGCTGATGTCGTGTGTCTCCATTGGGAGGAGGATGGGAAGAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACATGAACAGTAATACCTCCAGTTATGAAGATCGAACTTCACGGTTCTTTCCTCCTCCCCCTAGAGTTCCTAAGATGCCTGGACTTGTACCTGGGGATAGTGGCTTCATGGATGATGGAGAGGATTCTTTCCAGGAGCTATCAAATTCTTCACATCAAAGATATAACATTTTATGTAGCGGGGACAAGGATGGAAGTATCTGCTTCAATATCTTTGGCATATTTCCAATAGGGACAGTT.................................................................................................................................AATATACACAACCTTGTTGTCTCCAGTTCACTCTCAAGCAGCAATGTTGCTAGCCGACTTCTGAATGCTTCCATTTGTAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCCTTGTCCAAAGATCTTTGCCATTTAGTAGTTTTGTGCAATGGGGAGCTGATCACAGATGAGGTTGATCAAGGTGAAGGACATCATGGGTTACTTGGCTTTCACTGCTTAGTCCTCAATACTTCAATATTTTCCAAAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAACTGAACTTCACCAGGTTGCCCAACAGGCTTCCAACATTGAAGATCTGAGTGAAGTCATCCGGACATCACTATCAGTCATGTCTAAAATATGGTCCGATGCTATGCATACATTTCACGAGAAGTTCAATGCTGTATCCACATTGATCGCTGATCATG.......................................................................................GACTTGACTCTACTCCTCAGGATGAGTTTCTAAGCCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U587941" ref_strand="+" ref_description="SGN-U587941 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157327885|emb|CAO16597.1| (e_value=5e-44) unnamed; (*ATH) AT4G21530.1 (e_value=9e-39)  Symbol: None | transducin family protein / WD-40 repeat family protein, contains 1 WD-40 repeat (PF00400); similar to anaphase-promoting complex subunit 4 GI:6180011 (Homo sapiens); supported by EST GB:AU237382 | chr4:11450583-11454082 FORWARD | Ali... ; ">
      <seq>cgtaaagggccttggacgtgatttgagcaaaggggacagctttaaagatcccatagaagcggccctcttatgtattcctgatggatatcactgcattgatctctcgctttataaagagggtcaaattgttttactattaaacgaaactgcaaccacttctgagatttctggaaatgctttcatgatgattctacaagctggtgatctttcatttgtatctctttcaagatctaccgcccccaattcttggaagcttcacgaacttcaggattctgctatatacctgcaactggagagtgaaaaggttcgaagcattcctcattctgtggtctctcccttggcagttagtgcatcaagaggtgtagcttgtgtttttgctgcaagaaagcgtgctttggtttacatcttggacgaagatgaagatgaagtttctgatacagagtgacagtaccttgctgttcgctgggtcttttgcaggatctatcaattttgggtagataaagccagtgcctatccctttttactaaattgtagactctttgtacacttctagttaatagttattagttggatgatgttaaagctgaagaatcaacaaaattctacttcacattgaaaaatgaaaatatatttaatttgaaannaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="69068" stop="71055"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69367" g_stop="69481" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="115" r_length="115" r_score="0.896"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69482" i_stop="69574" i_length="93">
            <donor d_prob="0.980" d_score="0.98"/>
            <acceptor a_prob="0.783" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69575" g_stop="69727" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="116" r_stop="268" r_length="153" r_score="0.974"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="69728" i_stop="69948" i_length="221">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.929" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="69949" g_stop="70030" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="269" r_stop="350" r_length="82" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="70031" i_stop="70479" i_length="449">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="0.683" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="70480" g_stop="70741" g_length="262"/>
          <reference_exon_boundary r_type="cDNA" r_start="351" r_stop="613" r_length="263" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="645" polyA_stop="668"/>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-U587941" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>612</cumulative_length_of_scored_exons>
        <coverage percentage="0.916" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U587941" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69367" e_stop="69481"/>
          <exon e_start="69575" e_stop="69727"/>
          <exon e_start="69949" e_stop="70030"/>
          <exon e_start="70480" e_stop="70741"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTCAGGGGCCTTGCACGTGATTTGAGCAAAGTGGACAGTATACGTGATCCCATAGAAGCGGCCCTCTTATGTATTCCTGATGGATATCACTGTATTGATCTCTCGCTTTATAAAGTAAGTGGAAAATTCCCACCTGATGTTAATTTTCTATAACCTACAGCTTTCTAACCCTTGAACTGCTATTTAACATTTCATCATTCAAAGCAGGAGGGTCAAATTGTTTTACTATTAAACGAAACTGCAACCACTTCGGAGAGCTCTGGAAATGCTTTCATGATGATTCTACAAGCTGGTGACCTTTCATTTGTATCTCTTTCAAGATCTACCGCCCCCAATTCTTGGAAGCTTCACGAACTTCAGGTATATGACATCATTACTCTACCAGGAAATAATCTGCGTAAATTTCTCTTGGAAATTCTGTATCCAATGACATGCATTCTAGTTTGTTATGTTGGACGGATTGTCCATTGCGTCACTGAGTTTGAAATAGATGAAGGTGTATATACACGTGCTACATGGTTTGTTATTCTGAAGTCTGAACGTCAGAAACTAATTGACCTTTTTATCTGCATGATATCTAGGATTCTGCTATATACCTGCAACTGGAGAGTGAAAAGGTTCGAAGCATTCCTCATTCTGTGGTCTCTCCCTTGGCAGTTAGTGGTGAGTGGTTATATTTGTACTTTTTTGGGTGCCAACTGTTGTTAGTATCTATAGGAAAAGAGGCTAACACATTCATGAGAACTAACCAAGAACCTAAAATGTTTAATCGCTTGATACCAAAAATGAATACATCTGAACACCATTGTTCCTACTCATTTGAAGGCCGAAACACCTATTTCTTTGTCGATTAGAACTTCAGTTTCAAGCTAAGCTAAGCTAATGGTATTTAGAGAATCTAAAATCTTTATCTCCCCCCCACCCCCGGGATAGCTAATAGAGCCAGTGTGAATTTGAAATGCACTTAAAACTAGAATCCCGTAATGACAGATGGAATTTCATCCAAATACACATGATATTGTTGTTAACAGTTTTCTTGTAATATGGATGACTAATGCTAGACACTTACTTACCAAGAGATTTGACATTTTCAATATGATTTTCTCTATCAGCATCAAGAGGTGTAGCTTGTGTTTTTGCTGCAAGAAAGCGTGCTTTGGTTTACATCTTGGACGAAGATGAAGATGAAGTTTCTGATACAGAGTGACAGTACCTTGCTGTTCGCTGGGTCTTTTGCAGGATCTATCAATTTTGGGCAGAT-AAGCCAGTGTCTATCCCTTTTTACTAAATTGTAGACTCTTTGTACACTTCTAGTTAATAGTTATTAGTTGGATGATGTTAAAGCTGAAGAATCAACAAAATTCTACTTCACAT</genome_strand>
        <mrna_strand>CGTAAAGGGCCTTGGACGTGATTTGAGCAAAGGGGACAGCTTTAAAGATCCCATAGAAGCGGCCCTCTTATGTATTCCTGATGGATATCACTGCATTGATCTCTCGCTTTATAAA.............................................................................................GAGGGTCAAATTGTTTTACTATTAAACGAAACTGCAACCACTTCTGAGATTTCTGGAAATGCTTTCATGATGATTCTACAAGCTGGTGATCTTTCATTTGTATCTCTTTCAAGATCTACCGCCCCCAATTCTTGGAAGCTTCACGAACTTCAG.............................................................................................................................................................................................................................GATTCTGCTATATACCTGCAACTGGAGAGTGAAAAGGTTCGAAGCATTCCTCATTCTGTGGTCTCTCCCTTGGCAGTTAGTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAAGAGGTGTAGCTTGTGTTTTTGCTGCAAGAAAGCGTGCTTTGGTTTACATCTTGGACGAAGATGAAGATGAAGTTTCTGATACAGAGTGACAGTACCTTGCTGTTCGCTGGGTCTTTTGCAGGATCTATCAATTTTGGGTAGATAAAGCCAGTGCCTATCCCTTTTTACTAAATTGTAGACTCTTTGTACACTTCTAGTTAATAGTTATTAGTTGGATGATGTTAAAGCTGAAGAATCAACAAAATTCTACTTCACAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U587940" ref_strand="-" ref_description="SGN-U587940 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157327885|emb|CAO16597.1| (e_value=2e-37) unnamed; (*ATH) AT4G21530.1 (e_value=6e-30)  Symbol: None | transducin family protein / WD-40 repeat family protein, contains 1 WD-40 repeat (PF00400); similar to anaphase-promoting complex subunit 4 GI:6180011 (Homo sapiens); supported by EST GB:AU237382 | chr4:11450583-11454082 FORWARD | Ali... ; ">
      <seq>caggggccttgcacgtgatttgagcaaagtggacagtatacgtgatcccatagaagcggcccttttatgtattcctgatggatatcactgcattgatttttcgctttataaagagggtcaaattgtttttctattaaacgaaactgcaaccacttttgagatttttggaaatgctttcatgatgattttacaagctggggatttttcatttgtatttttttcaagatttaccgcccccaatttttggaagcttcacgaacttcaggattttgctatatacctgcaactggagagtgaaaaggtttgaagcattcctcattttgtggtttttcccttggcagttagtgcatcaagaggggtagtttgtgtttttgctgcaagaaagggtgctttggtttacattttggacgaagatgaagatgaagtttttgatacagagtgacagtaccttgttgtttgctgggttttttgcaggatttatcaattttgggtagataaagccagtgcctatccctttttagtaaattgtagactttttgtacccttttagttaatagttattagttggatgatgttaaaagggaagaatcaacaaaattttacttcccctgnaacataaaaaatatattttatttgcaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="69070" stop="71041"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69370" g_stop="69481" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="112" r_length="112" r_score="0.964"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69482" i_stop="69574" i_length="93">
            <donor d_prob="0.980" d_score="0.92"/>
            <acceptor a_prob="0.783" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69575" g_stop="69727" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="113" r_stop="265" r_length="153" r_score="0.908"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="69728" i_stop="69948" i_length="221">
            <donor d_prob="0.988" d_score="0.92"/>
            <acceptor a_prob="0.929" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="69949" g_stop="70030" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="266" r_stop="347" r_length="82" r_score="0.939"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="70031" i_stop="70479" i_length="449">
            <donor d_prob="0.975" d_score="0.92"/>
            <acceptor a_prob="0.683" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="70480" g_stop="70739" g_length="260"/>
          <reference_exon_boundary r_type="cDNA" r_start="348" r_stop="608" r_length="261" r_score="0.915"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="638" polyA_stop="665"/>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-U587940" ref_strand="-">
        <total_alignment_score>0.926</total_alignment_score>
        <cumulative_length_of_scored_exons>607</cumulative_length_of_scored_exons>
        <coverage percentage="0.913" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U587940" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="69370" e_stop="69481"/>
          <exon e_start="69575" e_stop="69727"/>
          <exon e_start="69949" e_stop="70030"/>
          <exon e_start="70480" e_stop="70739"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGGGGCCTTGCACGTGATTTGAGCAAAGTGGACAGTATACGTGATCCCATAGAAGCGGCCCTCTTATGTATTCCTGATGGATATCACTGTATTGATCTCTCGCTTTATAAAGTAAGTGGAAAATTCCCACCTGATGTTAATTTTCTATAACCTACAGCTTTCTAACCCTTGAACTGCTATTTAACATTTCATCATTCAAAGCAGGAGGGTCAAATTGTTTTACTATTAAACGAAACTGCAACCACTTCGGAGAGCTCTGGAAATGCTTTCATGATGATTCTACAAGCTGGTGACCTTTCATTTGTATCTCTTTCAAGATCTACCGCCCCCAATTCTTGGAAGCTTCACGAACTTCAGGTATATGACATCATTACTCTACCAGGAAATAATCTGCGTAAATTTCTCTTGGAAATTCTGTATCCAATGACATGCATTCTAGTTTGTTATGTTGGACGGATTGTCCATTGCGTCACTGAGTTTGAAATAGATGAAGGTGTATATACACGTGCTACATGGTTTGTTATTCTGAAGTCTGAACGTCAGAAACTAATTGACCTTTTTATCTGCATGATATCTAGGATTCTGCTATATACCTGCAACTGGAGAGTGAAAAGGTTCGAAGCATTCCTCATTCTGTGGTCTCTCCCTTGGCAGTTAGTGGTGAGTGGTTATATTTGTACTTTTTTGGGTGCCAACTGTTGTTAGTATCTATAGGAAAAGAGGCTAACACATTCATGAGAACTAACCAAGAACCTAAAATGTTTAATCGCTTGATACCAAAAATGAATACATCTGAACACCATTGTTCCTACTCATTTGAAGGCCGAAACACCTATTTCTTTGTCGATTAGAACTTCAGTTTCAAGCTAAGCTAAGCTAATGGTATTTAGAGAATCTAAAATCTTTATCTCCCCCCCACCCCCGGGATAGCTAATAGAGCCAGTGTGAATTTGAAATGCACTTAAAACTAGAATCCCGTAATGACAGATGGAATTTCATCCAAATACACATGATATTGTTGTTAACAGTTTTCTTGTAATATGGATGACTAATGCTAGACACTTACTTACCAAGAGATTTGACATTTTCAATATGATTTTCTCTATCAGCATCAAGAGGTGTAGCTTGTGTTTTTGCTGCAAGAAAGCGTGCTTTGGTTTACATCTTGGACGAAGATGAAGATGAAGTTTCTGATACAGAGTGACAGTACCTTGCTGTTCGCTGGGTCTTTTGCAGGATCTATCAATTTTGGGCAGAT-AAGCCAGTGTCTATCCCTTTTTACTAAATTGTAGACTCTTTGTACACTTCTAGTTAATAGTTATTAGTTGGATGATGTTAAAGCTGAAGAATCAACAAAATTCTACTTCAC</genome_strand>
        <mrna_strand>CAGGGGCCTTGCACGTGATTTGAGCAAAGTGGACAGTATACGTGATCCCATAGAAGCGGCCCTTTTATGTATTCCTGATGGATATCACTGCATTGATTTTTCGCTTTATAAA.............................................................................................GAGGGTCAAATTGTTTTTCTATTAAACGAAACTGCAACCACTTTTGAGATTTTTGGAAATGCTTTCATGATGATTTTACAAGCTGGGGATTTTTCATTTGTATTTTTTTCAAGATTTACCGCCCCCAATTTTTGGAAGCTTCACGAACTTCAG.............................................................................................................................................................................................................................GATTTTGCTATATACCTGCAACTGGAGAGTGAAAAGGTTTGAAGCATTCCTCATTTTGTGGTTTTTCCCTTGGCAGTTAGTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAAGAGGGGTAGTTTGTGTTTTTGCTGCAAGAAAGGGTGCTTTGGTTTACATTTTGGACGAAGATGAAGATGAAGTTTTTGATACAGAGTGACAGTACCTTGTTGTTTGCTGGGTTTTTTGCAGGATTTATCAATTTTGGGTAGATAAAGCCAGTGCCTATCCCTTTTTAGTAAATTGTAGACTTTTTGTACCCTTTTAGTTAATAGTTATTAGTTGGATGATGTTAAAAGGGAAGAATCAACAAAATTTTACTTCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U583537" ref_strand="+" ref_description="SGN-U583537 Tomato 200607#2 [27 ESTs aligned] (*GB) gi|157327884|emb|CAO16596.1| (e_value=0) unnamed; (*ATH) AT2G18750.1 (e_value=0) | Symbol: None | calmodulin-binding protein, similar to calmodulin-binding protein TCB60 GI:1698548 from (Nicotiana tabacum) | chr2:8132600-8135702 FORWARD | Aliases: MSF3.13, MSF3_13; ">
      <seq>attcatagaatgatagttccatgaactttccgagaaacatctcttcatcttctttcttctttcaatttttttcccgctttccccttttttcgctcctttttctcactttcttctatccactgagaaaaaaagaagaaaattttgagtctcactatacgaaacagactgttgaataatcaaacaaagaaaaaagaaagaaactttagatcagatctgaaaatttgaacaagaggagtgttttaatagtcaaagaaaatgcagacaaggtatatggagaaacgtgttttggatccaagtagtagtgaggaaggtcaacctgataggaaaagacctgctcttgcaagtgtcattgttgaagcgctaaaggtggacagtctgcaaaaactctgctcatcactggagccaattcttcgaagagttgttagtgaagaagtggagcgtgctttggctaaacttggacctgctaaacttaatgcaagggtttcgccaaaaagaattgaaggacctgatgggagaaatttgcagcttcagtttcggtccaaactgtcactacctctcttcactggaggaaaagtagaaggagagcagggttccgcaatacatattgtcttgattgatggaaatacaaaccatgttgtaacatcaggtcccgagtccttggttaagttagatgttgttgtgcttgaaggagattttaacaatgaggatgatgatggctggactcaagaagaatttgagtctcatatcgtcaaggagcgtgaaggcaagaggcctctccttactggagaattgcaagtgatattgaaggaaggtgttggcacccttggcgagttgacatttactgacaactccagctggatcagaagcagaaagttcaggctaggcttaaaggtggcatcaggttgctgtgagggaatccgcattcgtgaggcaaaaacagatgccttcactgtcaaggatcatagaggagaattgtacaagaaacattatccacctgcattagatgatgaagtttggagattggaaaagatagggaaagatggatccttccacaagaggctaaataaagctggcatacataaagtggaagactttctgcgtcttgttgtgagagactcgcagaggctccgaaatgtcctgggaagtggaatgtcaaataaaatgtgggatgctcttctggaccatgcaaaaacctgtgtactaagtgggaagctatatgtctactatcctgatgatatgagaaatgtcggtgttgtttttaataatatctatgaattatgtggtttaatctctggcggacagtatcattcaatggattctctttcagacaatcagaagatatatgtggatactttagttaagaaggcgtatgacaactggatgcaagttgttgagtatgatggaaaatctctcctaagcctgggccagaataaagccgcagtttcgtctcaaaatgatcctacaattggctctcagaaccatacaatctcttttgatcaacaaactaatctaccaagtcttccagcttcaatatcatcagagcagccttctatgaattcaggactgaacatgggagggtataatgatagcctcagtggcagatacactatgcagcctcagaacatgaatctaaatggcaacatgcagttaaatggtgcttcgtttcctcagaaccatttgctcggcacgtcacaacaagctcagccgcatgggagtgatagcatgctggcccttcgcccaccacagccatcaatgtctagctattttgctgctagcacgcctaatccttataagggagctgaggacttcttaacagaggaagagatacgtatgaaaagtcatgagatgctcgaaaatgaagacatgcaacatttgctacgtatgttcagcatgggacagggtcatgcgtcttctagtgttgcagaagagaattaccagtatggatcagcatacatgcccagcatgtcttctaattttggttttgatgaggaacgtacacgttcttcaggtaaggctgttgtagggtggctcaaactcaaagctgccttgagatggggcattttcataaggaagaaagctgcagaaagaagagcacaaattactgaactggatgactcttagatttgattttccccttagcaaccacttggatatgatgtgtaagggctttcctctaagaagcatattatcgatcttggaatttggtttgacaatccatatgcatctggtgctgggttgggctcaatctgaacctaggagcctcttataatgtacagttatgcctgtccatggagattgctctctctccattaacagaataacataagcttatgatagttctctcagcatattatatgcagttcaaagactggagcagttttcatggctctagctgaagggaaattcccatggtttagacctgatttcttctactagggactgaaggaagtgacttcatttgccttgtgctaactcaagattgtagcaagtatgttttgatgagttatgtttgactgatgctgtaatttttagtgttttgttgtaatgagtttatcaaaagaaaacataatatttgtctcatagaaacatttgttgtgaacatatcattaaaatgtgatgtggtaaaccttcaaaaatttgttatattgaacg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="-" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="78394" stop="70709"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="78094" g_stop="77751" g_length="344"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="344" r_length="344" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="77750" i_stop="76628" i_length="1123">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.931" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76627" g_stop="76552" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="345" r_stop="420" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="76551" i_stop="75707" i_length="845">
            <donor d_prob="0.710" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75706" g_stop="75648" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="421" r_stop="479" r_length="59" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="75647" i_stop="74768" i_length="880">
            <donor d_prob="0.951" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="74767" g_stop="74274" g_length="494"/>
          <reference_exon_boundary r_type="cDNA" r_start="480" r_stop="973" r_length="494" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="74273" i_stop="74188" i_length="86">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="74187" g_stop="74027" g_length="161"/>
          <reference_exon_boundary r_type="cDNA" r_start="974" r_stop="1134" r_length="161" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="74026" i_stop="73932" i_length="95">
            <donor d_prob="0.854" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="73931" g_stop="73728" g_length="204"/>
          <reference_exon_boundary r_type="cDNA" r_start="1135" r_stop="1338" r_length="204" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="73727" i_stop="72921" i_length="807">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.928" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="72920" g_stop="72683" g_length="238"/>
          <reference_exon_boundary r_type="cDNA" r_start="1339" r_stop="1576" r_length="238" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="72682" i_stop="72085" i_length="598">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="72084" g_stop="71009" g_length="1076"/>
          <reference_exon_boundary r_type="cDNA" r_start="1577" r_stop="2652" r_length="1076" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="-" ref_id="SGN-U583537" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>2652</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U583537" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="78094" e_stop="77751"/>
          <exon e_start="76627" e_stop="76552"/>
          <exon e_start="75706" e_stop="75648"/>
          <exon e_start="74767" e_stop="74274"/>
          <exon e_start="74187" e_stop="74027"/>
          <exon e_start="73931" e_stop="73728"/>
          <exon e_start="72920" e_stop="72683"/>
          <exon e_start="72084" e_stop="71009"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTCATAGAATGATAGTTCCATGAACTTTCCGAGAAACATCTCTTCATCTTCTTTCTTCTTTCAATTTTTTTCCCGCTTTCCCCTTTTTTCGCTCCTTTTTCTCACTTTCTTCTATCCACTGAGAAAAAAAGAAGAAAATTTTGAGTCTCACTATACGAAACAGACTGTTGAATAATCAAACAAAGAAAAAAGAAAGAAACTTTAGATCAGATCTGAAAATTTGAACAAGAGGAGTGTTTTAATAGTCAAAGAAAATGCAGACAAGGTATATGGAGAAACGTGTTTTGGATCCAAGTAGTAGTGAGGAAGGTCAACCTGATAGGAAAAGACCTGCTCTTGCAAGGTAATTTGATTTTTAAAAAAATGTTTTTTTTTTAGACTTTTTGTTGAGGGGTATTTTTTCTTTTGGTCTTGTTTTATGTATTATAGCAAATTTTAGTACTGAACAATGCAGTTGGTTTGTTTGAATGATTGGTTATTATGAAAGGTTTTGCTGGGAATATTTGTTGGTTTGAAGAAATTGTAGAGTTTGGGTATTGCAAAAATTATTGTGGAAAGGGGAGAATGGTGATTCTGTTTTGTTGGGGTGGTGGTGAATTAAAATTTTTAGTAAGAAAAATGTGATCTTGATGAATTATGTGTGACGAATGAGGTATTATTATCAAGATCCTTGGAGAGAAGAGAGTGGGAAGCTTTATTGTCTGGTTGTTTGGTGTTGACTGCAAGTGAAGGAAGTTTTTTGATTGAATCTGGCTTGATAACTAGCTTGCTCTTTGTTTTGGTTTATGAGAGAAAAATGAGTATTTTGCTTTGTCATAACTACAAACAATCTACTATTTGATCAGCTGTGGCACTGAAAGAAGAGATTTATAGTGGTTAATTCATGATTCCTTTTTAAGATTTGTGTCATTCGAGGAGGTGATTTGAAGGATTTTGATCATGTTGCAAATAACTTACAATGAATAACATTACATGACTGCCCCTGTCACAGCCCCACAGGACAGAAAGTGGTCCACTAGATCAACTTTTAAATGGGATCTTCACTGTTGGTTGCCAATAAGATTATCCACATTTCATATTCTCAATCATCATTCAGAGGGGAAGTTGTCTCGGTATCCTGCCGGGGACATACTTGAGATTTCTAAGGGAAGTCATTACCAGGTGTTTGTAATCCTGCAAACACTTGTAGCTTTCTCTGAGTGTCTAAGTGATAGATTGATGGTCCACTCTACCCTTTTCTTTTTCTCTTAGCAAGTGATCAGAAAAAAGCTTTTCATTTTAGAGGTTTTTATTTCTGTTGATTGTTTGTTGTGGTATCATCTGACCTGACATCATGTGACCTGGATGTCTTATATTTTCTTAGAGAAGCTGAAATTCAGTGCCCTGTTATAGCTTTACTCATCTTTCTGTGCACTGTTCATGTTAACTGTTGCACACCCTTATTGAAAAGTACATGGTTACTGCAGTGTCATTGTTGAAGCGCTAAAGGTGGACAGTCTGCAAAAACTCTGCTCATCACTGGAGCCAATTCTTCGAAGAGTTGTAAGATTATTAGGCCCCCTTTAGAACTCTCATCCTATTCATTGGGCATTACTTATGTGAAATTTCATTTAACCAACCAACCACTCCATGGTAACTTGTGAAAGTTTGGTTTTCAATTACATAACTACTGTGGCATGATACATATTTCCAGAAGACTCAGCATGACAGATATTTTACTTCTGAAGGAATACAATGAAATAATCGTAACTGCAAGCTTTGTGACTATACAGGCCAAGTAAAGCCACTGCCAGATATTTGAAATGGATATGTCATTGTTTTGTGTAAAACCATTTATTTCATATGCTGAAATATTTTTTCAAACTATTTGTGCTTTGATCATTGTAGCAGTTACACTGAGAAACCCCTCCCCCCTCCCTCTCTCTCACCAGCGAGAGCTGTCTCCATATCCTGCTTATATGCATAGTTTCTGGAGATAAGTAGCTTTAAATTTTCCTGTCAAGAGCTTACTGAGTGCAGAAATTTACTTCTGTCTTTATTTTTGATGTGAACAACATATTTTAAGCATGTCTGCGCTCCAGGTGACCTTTTAGCAGTTCTTCTCTTGGACTCAAAATGTATTTGAGTTGGTAGTAAAAAGACTTTTGCGTGTTACCATGGCTTTATTCAACTTTTAGCTGTAAGAGCTAAGATATTAATGTCTTATGTACATTTACTTGAAACATTTGGATTCGATGGGCTTGTCACCAGCCCATCGAATGCTAATATTTTATGTGATTGGGATGACTAGACTATGCAAACATGTCCATTCGTGTTTTATTTGTACAAGGTTTCTTCTATAGTGGCTTTTGTTTACTTATTTATGAATGTCCATTTTTGTTTACCAGGTTAGTGAAGAAGTGGAGCGTGCTTTGGCTAAACTTGGACCTGCTAAACTTAATGCAAGGTATGGTTTCACATATCATCACTCAAACCTTTCAGAGCACAAATCTGATTCCCATATTTTGTCAGGATATTTGCATGTATGGGAAATATCCCATCACTCATCAGAGTCATTTGGTATATCCAATTGTGAACTGGTCAATGTTTAACTGAATTAGAGTGGGATATGAATTGTAGATGTTGGAAACACTTGAGGGGAGGTTTCCCTGGTCTTGTGCAATTATATATTTAGATTTAGGTAAGGTCAATATTTGTTACAGCAGTCAATCCCTATGATTAATGGGAGTGTGGGAGGGTTTGAGCACTTGCTGCAGCCAGAGTCAAAGGTAGATTAGTGAAACTAGTTACAGATGCAGGAAGTCAATTTAGGAAAGAACTAAATCTTAATAATGCTTTTAGAGTTTTGAAAAAGAGTTTTGCTAACATGAACCACAGACTACTAAAACCATTTACATGGACATGGTCCTATGTGTCTATCAGATTGTAATTGACTATTTATTTTGTTTGATATGCTTCTTATTATATAAGTTCCATGGTATTAAACCTTCTCACAGGGAATATCCTTCTGCTTCAGCGGTTTGTATGAGTCATTCTGACTTCTAGTTCATTTCAGTGCTAGAGCAGATTGATTTTCCCAATACTATGTGTGAAATGTGAAAAGACTTTTAGCAAGTCTCCTTCCCATTGGATACTGATCAAAGAATTGACCTAATATGCCAAACATTAGCATGACTATGAAGTGCAGTGTGAGGATGTGACCCCTAATTCAATTTTGCATCAAAGATCAATCTATGCCTATGCTTGCTTGAGCTGTTCATGTACTCCATTTTCTATAATTGAATGTTCACCCTGTTCCGGGATTGAATTTTGTGATAATTATGCAGGGTTTCGCCAAAAAGAATTGAAGGACCTGATGGGAGAAATTTGCAGCTTCAGTTTCGGTCCAAACTGTCACTACCTCTCTTCACTGGAGGAAAAGTAGAAGGAGAGCAGGGTTCCGCAATACATATTGTCTTGATTGATGGAAATACAAACCATGTTGTAACATCAGGTCCCGAGTCCTTGGTTAAGTTAGATGTTGTTGTGCTTGAAGGAGATTTTAACAATGAGGATGATGATGGCTGGACTCAAGAAGAATTTGAGTCTCATATCGTCAAGGAGCGTGAAGGCAAGAGGCCTCTCCTTACTGGAGAATTGCAAGTGATATTGAAGGAAGGTGTTGGCACCCTTGGCGAGTTGACATTTACTGACAACTCCAGCTGGATCAGAAGCAGAAAGTTCAGGCTAGGCTTAAAGGTGGCATCAGGTTGCTGTGAGGGAATCCGCATTCGTGAGGCAAAAACAGATGCCTTCACTGTCAAGGATCATAGAGGAGAATGTAAGCCCATATAATGTGTCTTTTGTATAGAAATGACAATTATGTTTGTTGAGGTTTGTAGTAACTCCAATCTTGTTTCCTTGCAGTGTACAAGAAACATTATCCACCTGCATTAGATGATGAAGTTTGGAGATTGGAAAAGATAGGGAAAGATGGATCCTTCCACAAGAGGCTAAATAAAGCTGGCATACATAAAGTGGAAGACTTTCTGCGTCTTGTTGTGAGAGACTCGCAGAGGCTCCGAAATGTAAAATTTCAAACTTGACATGTTGGAGAAAAAGAACTATAATTGTTAGTTGTAACTATATGATTAGTTTTTTGTTAATCATCTTGTTATCTCAGGTCCTGGGAAGTGGAATGTCAAATAAAATGTGGGATGCTCTTCTGGACCATGCAAAAACCTGTGTACTAAGTGGGAAGCTATATGTCTACTATCCTGATGATATGAGAAATGTCGGTGTTGTTTTTAATAATATCTATGAATTATGTGGTTTAATCTCTGGCGGACAGTATCATTCAATGGATTCTCTTTCAGACAATCAGAAGGTTTGTAATCTGTAATTATTTTCTCTCTTTTGTATAATTTGGTATTGTGGATTCATCTAGACATGCTTAAGGGAAAATGAAGAAGGAAGACATGGGGGCTATGGTTTCCCATGCTTACCCAACCATCTTTTACAATGGATTACCAAGAGCTTTTTTTTCTCCTATCTGTGGCGTTTTGTGAAGTGACTACTCTTCAAGAAGCAAAACACATTCATTTTCATGTTTGTCTCCTCCCAGATCACATCTAGAAGAGATTTACTAACAAAAGTCCCTCAGAACAAACTTTCCTGCTTGCTACAGTTCGAAAAAACTTTTTCTTAGAAATTTAGCTGTTTGTAACTTAGAGATATATCTGCCAAGTTCTTATGGGATATTATCCAGAAATTAGTTGCTGAAGCAATGAAATGCCTTTGATTTAGCTTCTCTGTTCTTTTTCTACCTTTTACAGGCAATAGTTAGAAGGATACAAACTGCTGATTCTGTAAAAATTGATTACAATGAAATTTCCGAAGGCAATGTTGTACCCTTCGAGTTGCTTTGTATATATAGAATATTCAACCCTTTTGACCATATCCAAACAATATTTACAACTAATTTTATTTGATACTGCTAGAATTGCCACACTAGTTAGATGCGGTTTGCACTTTCTCCTTTGTCCCTGTGACATTTCGATACTTCACATAATAGTGGTCAATGGAGTTGTGAGAGTTGCTATCATTTGCATAAATCGACCTTTTTTGGATGATAGTTCTTTTTTTCCCGAGTTTATGATGAAGTTATTAAGCAAACATCAAACAAAATTTGCAGATATATGTGGATACTTTAGTTAAGAAGGCGTATGACAACTGGATGCAAGTTGTTGAGTATGATGGAAAATCTCTCCTAAGCCTGGGCCAGAATAAAGCCGCAGTTTCGTCTCAAAATGATCCTACAATTGGCTCTCAGAACCATACAATCTCTTTTGATCAACAAACTAATCTACCAAGTCTTCCAGCTTCAATATCATCAGAGCAGCCTTCTATGAATTCAGGACTGAACATGGGAGGTATAAATATGTCTTGGTGCCTAAGATATGTTCCTGCTAAAGTGTGAATTTTGCCCTCTCTGCTTTTACTGCTGTTTGGGACGGTTTCTGGGTGATTGGAACAAGAATTCTTCACAAAGATACATTCTTCATGAACTGTGTTGGATTCTGCTCACTCCTCTTTTTGCAGTTTTGGCTTCTTGGTGTGATTTCTTGTTGATTGGAATATAATTCCTCACTATAATAGTGTCTTAACAAGTTTCCAAAGTGAAAAAAGCATAAACACAAGCAGTGTCTGTCAGCGTCAAGCGTTGGATATACTATGACATGTTCCTTTTGTTCTTGAATTTGATACCAGCAAGGTCGTTTTTCCAAATCTTTTTGATATTTCTGTAAATAAAGTAATGTATATCTTGGCAAATTTTTTCGCACAGAAGTAGGTCTCTCAACCTGCATTGTTTACTGCTTTGCATGACGTGAAGGATACCTAGTATAAGGCTTAAAACCTGCAATTACCTGTTTAGTGAGCAGTTGACCATTATACTATGACCTCATTGGTTTGTTGGATTGTTATAAGTTCTTATTTGTAACTTTCAATGAGATATCTTTCTGTTACCAGGGTATAATGATAGCCTCAGTGGCAGATACACTATGCAGCCTCAGAACATGAATCTAAATGGCAACATGCAGTTAAATGGTGCTTCGTTTCCTCAGAACCATTTGCTCGGCACGTCACAACAAGCTCAGCCGCATGGGAGTGATAGCATGCTGGCCCTTCGCCCACCACAGCCATCAATGTCTAGCTATTTTGCTGCTAGCACGCCTAATCCTTATAAGGGAGCTGAGGACTTCTTAACAGAGGAAGAGATACGTATGAAAAGTCATGAGATGCTCGAAAATGAAGACATGCAACATTTGCTACGTATGTTCAGCATGGGACAGGGTCATGCGTCTTCTAGTGTTGCAGAAGAGAATTACCAGTATGGATCAGCATACATGCCCAGCATGTCTTCTAATTTTGGTTTTGATGAGGAACGTACACGTTCTTCAGGTAAGGCTGTTGTAGGGTGGCTCAAACTCAAAGCTGCCTTGAGATGGGGCATTTTCATAAGGAAGAAAGCTGCAGAAAGAAGAGCACAAATTACTGAACTGGATGACTCTTAGATTTGATTTTCCCCTTAGCAACCACTTGGATATGATGTGTAAGGGCTTTCCTCTAAGAAGCATATTATCGATCTTGGAATTTGGTTTGACAATCCATATGCATCTGGTGCTGGGTTGGGCTCAATCTGAACCTAGGAGCCTCTTATAATGTACAGTTATGCCTGTCCATGGAGATTGCTCTCTCTCCATTAACAGAATAACATAAGCTTATGATAGTTCTCTCAGCATATTATATGCAGTTCAAAGACTGGAGCAGTTTTCATGGCTCTAGCTGAAGGGAAATTCCCATGGTTTAGACCTGATTTCTTCTACTAGGGACTGAAGGAAGTGACTTCATTTGCCTTGTGCTAACTCAAGATTGTAGCAAGTATGTTTTGATGAGTTATGTTTGACTGATGCTGTAATTTTTAGTGTTTTGTTGTAATGAGTTTATCAAAAGAAAACATAATATTTGTCTCATAGAAACATTTGTTGTGAACATATCATTAAAATGTGATGTGGTAAACCTTCAAAAATTTGTTATATTGAACG</genome_strand>
        <mrna_strand>ATTCATAGAATGATAGTTCCATGAACTTTCCGAGAAACATCTCTTCATCTTCTTTCTTCTTTCAATTTTTTTCCCGCTTTCCCCTTTTTTCGCTCCTTTTTCTCACTTTCTTCTATCCACTGAGAAAAAAAGAAGAAAATTTTGAGTCTCACTATACGAAACAGACTGTTGAATAATCAAACAAAGAAAAAAGAAAGAAACTTTAGATCAGATCTGAAAATTTGAACAAGAGGAGTGTTTTAATAGTCAAAGAAAATGCAGACAAGGTATATGGAGAAACGTGTTTTGGATCCAAGTAGTAGTGAGGAAGGTCAACCTGATAGGAAAAGACCTGCTCTTGCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCATTGTTGAAGCGCTAAAGGTGGACAGTCTGCAAAAACTCTGCTCATCACTGGAGCCAATTCTTCGAAGAGTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAGTGAAGAAGTGGAGCGTGCTTTGGCTAAACTTGGACCTGCTAAACTTAATGCAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTTCGCCAAAAAGAATTGAAGGACCTGATGGGAGAAATTTGCAGCTTCAGTTTCGGTCCAAACTGTCACTACCTCTCTTCACTGGAGGAAAAGTAGAAGGAGAGCAGGGTTCCGCAATACATATTGTCTTGATTGATGGAAATACAAACCATGTTGTAACATCAGGTCCCGAGTCCTTGGTTAAGTTAGATGTTGTTGTGCTTGAAGGAGATTTTAACAATGAGGATGATGATGGCTGGACTCAAGAAGAATTTGAGTCTCATATCGTCAAGGAGCGTGAAGGCAAGAGGCCTCTCCTTACTGGAGAATTGCAAGTGATATTGAAGGAAGGTGTTGGCACCCTTGGCGAGTTGACATTTACTGACAACTCCAGCTGGATCAGAAGCAGAAAGTTCAGGCTAGGCTTAAAGGTGGCATCAGGTTGCTGTGAGGGAATCCGCATTCGTGAGGCAAAAACAGATGCCTTCACTGTCAAGGATCATAGAGGAGAAT......................................................................................TGTACAAGAAACATTATCCACCTGCATTAGATGATGAAGTTTGGAGATTGGAAAAGATAGGGAAAGATGGATCCTTCCACAAGAGGCTAAATAAAGCTGGCATACATAAAGTGGAAGACTTTCTGCGTCTTGTTGTGAGAGACTCGCAGAGGCTCCGAAAT...............................................................................................GTCCTGGGAAGTGGAATGTCAAATAAAATGTGGGATGCTCTTCTGGACCATGCAAAAACCTGTGTACTAAGTGGGAAGCTATATGTCTACTATCCTGATGATATGAGAAATGTCGGTGTTGTTTTTAATAATATCTATGAATTATGTGGTTTAATCTCTGGCGGACAGTATCATTCAATGGATTCTCTTTCAGACAATCAGAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATGTGGATACTTTAGTTAAGAAGGCGTATGACAACTGGATGCAAGTTGTTGAGTATGATGGAAAATCTCTCCTAAGCCTGGGCCAGAATAAAGCCGCAGTTTCGTCTCAAAATGATCCTACAATTGGCTCTCAGAACCATACAATCTCTTTTGATCAACAAACTAATCTACCAAGTCTTCCAGCTTCAATATCATCAGAGCAGCCTTCTATGAATTCAGGACTGAACATGGGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTATAATGATAGCCTCAGTGGCAGATACACTATGCAGCCTCAGAACATGAATCTAAATGGCAACATGCAGTTAAATGGTGCTTCGTTTCCTCAGAACCATTTGCTCGGCACGTCACAACAAGCTCAGCCGCATGGGAGTGATAGCATGCTGGCCCTTCGCCCACCACAGCCATCAATGTCTAGCTATTTTGCTGCTAGCACGCCTAATCCTTATAAGGGAGCTGAGGACTTCTTAACAGAGGAAGAGATACGTATGAAAAGTCATGAGATGCTCGAAAATGAAGACATGCAACATTTGCTACGTATGTTCAGCATGGGACAGGGTCATGCGTCTTCTAGTGTTGCAGAAGAGAATTACCAGTATGGATCAGCATACATGCCCAGCATGTCTTCTAATTTTGGTTTTGATGAGGAACGTACACGTTCTTCAGGTAAGGCTGTTGTAGGGTGGCTCAAACTCAAAGCTGCCTTGAGATGGGGCATTTTCATAAGGAAGAAAGCTGCAGAAAGAAGAGCACAAATTACTGAACTGGATGACTCTTAGATTTGATTTTCCCCTTAGCAACCACTTGGATATGATGTGTAAGGGCTTTCCTCTAAGAAGCATATTATCGATCTTGGAATTTGGTTTGACAATCCATATGCATCTGGTGCTGGGTTGGGCTCAATCTGAACCTAGGAGCCTCTTATAATGTACAGTTATGCCTGTCCATGGAGATTGCTCTCTCTCCATTAACAGAATAACATAAGCTTATGATAGTTCTCTCAGCATATTATATGCAGTTCAAAGACTGGAGCAGTTTTCATGGCTCTAGCTGAAGGGAAATTCCCATGGTTTAGACCTGATTTCTTCTACTAGGGACTGAAGGAAGTGACTTCATTTGCCTTGTGCTAACTCAAGATTGTAGCAAGTATGTTTTGATGAGTTATGTTTGACTGATGCTGTAATTTTTAGTGTTTTGTTGTAATGAGTTTATCAAAAGAAAACATAATATTTGTCTCATAGAAACATTTGTTGTGAACATATCATTAAAATGTGATGTGGTAAACCTTCAAAAATTTGTTATATTGAACG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U583540" ref_strand="+" ref_description="SGN-U583540 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|157327884|emb|CAO16596.1| (e_value=8e-76) unnamed; (*ATH) AT2G18750.1 (e_value=6e-65) | Symbol: None | calmodulin-binding protein, similar to calmodulin-binding protein TCB60 GI:1698548 from (Nicotiana tabacum) | chr2:8132600-8135702 FORWARD | Aliases: MSF3.13, MSF3_13; ">
      <seq>ttcgctcctttttctcactttcttctatccactgagaaaaaaagaagaaaattttgagtctcactatacgaaacagactgttgaataatcaaacaaagaaaaaagaaagaaactttagatcagatctgaaaatttgaacaagaggagtgttttaatagtcaaagaaaatgcagacaaggtatatggagaaacgtgttttggatccaagtagtagtgaggaaggtcaacctgataggaaaagacctgctcttgcaaggttagtgaagaagtggagcgtgctttggctaaacttggacctgctaaacttaatgcaagggtttcgccaaaaagaattgaaggacctgatgggagaaatttgcagcttcagtttcggtccaaactgtcactacctctcttcactggaggaaaagtagaaggagagcagggttccgcaatacatattgtcttgattgatggaaatacaaaccatgttgtaacatcaggtcccgagtccttggttaagttagatgttgttgtgcttgaaggagattttaacaatgaggatgatgatggctggactcaagaagaatttgagtctcatatcgtcaaggagcgtgaaggcaagaggcctctccttactggagaattgcaagtgatattgaaggaaggtgttggcacccttggcgagttgacatttactgacaactcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="-" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="78306" stop="74095"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="78006" g_stop="77751" g_length="256"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="256" r_length="256" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="77750" i_stop="75707" i_length="2044">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="75706" g_stop="75648" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="257" r_stop="315" r_length="59" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75647" i_stop="74768" i_length="880">
            <donor d_prob="0.951" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="74767" g_stop="74395" g_length="373"/>
          <reference_exon_boundary r_type="cDNA" r_start="316" r_stop="688" r_length="373" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="-" ref_id="SGN-U583540" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>688</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U583540" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="78006" e_stop="77751"/>
          <exon e_start="75706" e_stop="75648"/>
          <exon e_start="74767" e_stop="74395"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCGCTCCTTTTTCTCACTTTCTTCTATCCACTGAGAAAAAAAGAAGAAAATTTTGAGTCTCACTATACGAAACAGACTGTTGAATAATCAAACAAAGAAAAAAGAAAGAAACTTTAGATCAGATCTGAAAATTTGAACAAGAGGAGTGTTTTAATAGTCAAAGAAAATGCAGACAAGGTATATGGAGAAACGTGTTTTGGATCCAAGTAGTAGTGAGGAAGGTCAACCTGATAGGAAAAGACCTGCTCTTGCAAGGTAATTTGATTTTTAAAAAAATGTTTTTTTTTTAGACTTTTTGTTGAGGGGTATTTTTTCTTTTGGTCTTGTTTTATGTATTATAGCAAATTTTAGTACTGAACAATGCAGTTGGTTTGTTTGAATGATTGGTTATTATGAAAGGTTTTGCTGGGAATATTTGTTGGTTTGAAGAAATTGTAGAGTTTGGGTATTGCAAAAATTATTGTGGAAAGGGGAGAATGGTGATTCTGTTTTGTTGGGGTGGTGGTGAATTAAAATTTTTAGTAAGAAAAATGTGATCTTGATGAATTATGTGTGACGAATGAGGTATTATTATCAAGATCCTTGGAGAGAAGAGAGTGGGAAGCTTTATTGTCTGGTTGTTTGGTGTTGACTGCAAGTGAAGGAAGTTTTTTGATTGAATCTGGCTTGATAACTAGCTTGCTCTTTGTTTTGGTTTATGAGAGAAAAATGAGTATTTTGCTTTGTCATAACTACAAACAATCTACTATTTGATCAGCTGTGGCACTGAAAGAAGAGATTTATAGTGGTTAATTCATGATTCCTTTTTAAGATTTGTGTCATTCGAGGAGGTGATTTGAAGGATTTTGATCATGTTGCAAATAACTTACAATGAATAACATTACATGACTGCCCCTGTCACAGCCCCACAGGACAGAAAGTGGTCCACTAGATCAACTTTTAAATGGGATCTTCACTGTTGGTTGCCAATAAGATTATCCACATTTCATATTCTCAATCATCATTCAGAGGGGAAGTTGTCTCGGTATCCTGCCGGGGACATACTTGAGATTTCTAAGGGAAGTCATTACCAGGTGTTTGTAATCCTGCAAACACTTGTAGCTTTCTCTGAGTGTCTAAGTGATAGATTGATGGTCCACTCTACCCTTTTCTTTTTCTCTTAGCAAGTGATCAGAAAAAAGCTTTTCATTTTAGAGGTTTTTATTTCTGTTGATTGTTTGTTGTGGTATCATCTGACCTGACATCATGTGACCTGGATGTCTTATATTTTCTTAGAGAAGCTGAAATTCAGTGCCCTGTTATAGCTTTACTCATCTTTCTGTGCACTGTTCATGTTAACTGTTGCACACCCTTATTGAAAAGTACATGGTTACTGCAGTGTCATTGTTGAAGCGCTAAAGGTGGACAGTCTGCAAAAACTCTGCTCATCACTGGAGCCAATTCTTCGAAGAGTTGTAAGATTATTAGGCCCCCTTTAGAACTCTCATCCTATTCATTGGGCATTACTTATGTGAAATTTCATTTAACCAACCAACCACTCCATGGTAACTTGTGAAAGTTTGGTTTTCAATTACATAACTACTGTGGCATGATACATATTTCCAGAAGACTCAGCATGACAGATATTTTACTTCTGAAGGAATACAATGAAATAATCGTAACTGCAAGCTTTGTGACTATACAGGCCAAGTAAAGCCACTGCCAGATATTTGAAATGGATATGTCATTGTTTTGTGTAAAACCATTTATTTCATATGCTGAAATATTTTTTCAAACTATTTGTGCTTTGATCATTGTAGCAGTTACACTGAGAAACCCCTCCCCCCTCCCTCTCTCTCACCAGCGAGAGCTGTCTCCATATCCTGCTTATATGCATAGTTTCTGGAGATAAGTAGCTTTAAATTTTCCTGTCAAGAGCTTACTGAGTGCAGAAATTTACTTCTGTCTTTATTTTTGATGTGAACAACATATTTTAAGCATGTCTGCGCTCCAGGTGACCTTTTAGCAGTTCTTCTCTTGGACTCAAAATGTATTTGAGTTGGTAGTAAAAAGACTTTTGCGTGTTACCATGGCTTTATTCAACTTTTAGCTGTAAGAGCTAAGATATTAATGTCTTATGTACATTTACTTGAAACATTTGGATTCGATGGGCTTGTCACCAGCCCATCGAATGCTAATATTTTATGTGATTGGGATGACTAGACTATGCAAACATGTCCATTCGTGTTTTATTTGTACAAGGTTTCTTCTATAGTGGCTTTTGTTTACTTATTTATGAATGTCCATTTTTGTTTACCAGGTTAGTGAAGAAGTGGAGCGTGCTTTGGCTAAACTTGGACCTGCTAAACTTAATGCAAGGTATGGTTTCACATATCATCACTCAAACCTTTCAGAGCACAAATCTGATTCCCATATTTTGTCAGGATATTTGCATGTATGGGAAATATCCCATCACTCATCAGAGTCATTTGGTATATCCAATTGTGAACTGGTCAATGTTTAACTGAATTAGAGTGGGATATGAATTGTAGATGTTGGAAACACTTGAGGGGAGGTTTCCCTGGTCTTGTGCAATTATATATTTAGATTTAGGTAAGGTCAATATTTGTTACAGCAGTCAATCCCTATGATTAATGGGAGTGTGGGAGGGTTTGAGCACTTGCTGCAGCCAGAGTCAAAGGTAGATTAGTGAAACTAGTTACAGATGCAGGAAGTCAATTTAGGAAAGAACTAAATCTTAATAATGCTTTTAGAGTTTTGAAAAAGAGTTTTGCTAACATGAACCACAGACTACTAAAACCATTTACATGGACATGGTCCTATGTGTCTATCAGATTGTAATTGACTATTTATTTTGTTTGATATGCTTCTTATTATATAAGTTCCATGGTATTAAACCTTCTCACAGGGAATATCCTTCTGCTTCAGCGGTTTGTATGAGTCATTCTGACTTCTAGTTCATTTCAGTGCTAGAGCAGATTGATTTTCCCAATACTATGTGTGAAATGTGAAAAGACTTTTAGCAAGTCTCCTTCCCATTGGATACTGATCAAAGAATTGACCTAATATGCCAAACATTAGCATGACTATGAAGTGCAGTGTGAGGATGTGACCCCTAATTCAATTTTGCATCAAAGATCAATCTATGCCTATGCTTGCTTGAGCTGTTCATGTACTCCATTTTCTATAATTGAATGTTCACCCTGTTCCGGGATTGAATTTTGTGATAATTATGCAGGGTTTCGCCAAAAAGAATTGAAGGACCTGATGGGAGAAATTTGCAGCTTCAGTTTCGGTCCAAACTGTCACTACCTCTCTTCACTGGAGGAAAAGTAGAAGGAGAGCAGGGTTCCGCAATACATATTGTCTTGATTGATGGAAATACAAACCATGTTGTAACATCAGGTCCCGAGTCCTTGGTTAAGTTAGATGTTGTTGTGCTTGAAGGAGATTTTAACAATGAGGATGATGATGGCTGGACTCAAGAAGAATTTGAGTCTCATATCGTCAAGGAGCGTGAAGGCAAGAGGCCTCTCCTTACTGGAGAATTGCAAGTGATATTGAAGGAAGGTGTTGGCACCCTTGGCGAGTTGACATTTACTGACAACTCC</genome_strand>
        <mrna_strand>TTCGCTCCTTTTTCTCACTTTCTTCTATCCACTGAGAAAAAAAGAAGAAAATTTTGAGTCTCACTATACGAAACAGACTGTTGAATAATCAAACAAAGAAAAAAGAAAGAAACTTTAGATCAGATCTGAAAATTTGAACAAGAGGAGTGTTTTAATAGTCAAAGAAAATGCAGACAAGGTATATGGAGAAACGTGTTTTGGATCCAAGTAGTAGTGAGGAAGGTCAACCTGATAGGAAAAGACCTGCTCTTGCAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAGTGAAGAAGTGGAGCGTGCTTTGGCTAAACTTGGACCTGCTAAACTTAATGCAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTTCGCCAAAAAGAATTGAAGGACCTGATGGGAGAAATTTGCAGCTTCAGTTTCGGTCCAAACTGTCACTACCTCTCTTCACTGGAGGAAAAGTAGAAGGAGAGCAGGGTTCCGCAATACATATTGTCTTGATTGATGGAAATACAAACCATGTTGTAACATCAGGTCCCGAGTCCTTGGTTAAGTTAGATGTTGTTGTGCTTGAAGGAGATTTTAACAATGAGGATGATGATGGCTGGACTCAAGAAGAATTTGAGTCTCATATCGTCAAGGAGCGTGAAGGCAAGAGGCCTCTCCTTACTGGAGAATTGCAAGTGATATTGAAGGAAGGTGTTGGCACCCTTGGCGAGTTGACATTTACTGACAACTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U594996" ref_strand="+" ref_description="SGN-U594996 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|147785125|emb|CAN66517.1| (e_value=6e-61) hypothetical; (*ATH) AT2G18750.1 (e_value=1e-52) | Symbol: None | calmodulin-binding protein, similar to calmodulin-binding protein TCB60 GI:1698548 from (Nicotiana tabacum) | chr2:8132600-8135702 FORWARD | Aliases: MSF3.13, MSF3_13; ">
      <seq>gaggaagccatcaaaatagaaacattcatagaatgatagttccatgaactttccgagaaacatctcttcatcttctttcttctttcaatttttttcccgctttccccttttttcgctcctttttctcactttcttctatccactgagaaaaaaagaagaaaattttgagtctcactatacgaaacagactgttgaataatcaaacaaagaaaaaagaaagaaactttagatcagatctgaaaatttgaacaagaggagtgttttaatagtcaaagaaaatgcagacaaggtatatggagaaacgtgttttggatccaagtagtagtgaggaaggtcaacctgataggaaaagacctgctcttgcaagtgtcattgttgaagcgctaaaggtggacagtctgcaaaaactctgctcatcactggagccaattcttcgaagagttgttagtgaagaagtggagcgtgctttggctaaacttggacctgctaaacttaatgcaagggtttcgccaaaaagaattgaaggacctgatgggagaaatttgcagcttcagtttcggtccaaactgtcactacctctcttcactggaggaaaagtanaaggagagcagggttccgcaatacatattgtcttgattgatggaaatacaaaccatgttgtaacatcnnntcccgagtccttggttaagttanatgttgttgtgcttgannnanantttaacaatgaggangatganggctggnct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="-" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="78417" stop="74261"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="78117" g_stop="77751" g_length="367"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="367" r_length="367" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="77750" i_stop="76628" i_length="1123">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.931" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76627" g_stop="76552" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="368" r_stop="443" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="76551" i_stop="75707" i_length="845">
            <donor d_prob="0.710" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75706" g_stop="75648" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="444" r_stop="502" r_length="59" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="75647" i_stop="74768" i_length="880">
            <donor d_prob="0.951" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="74767" g_stop="74524" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="503" r_stop="746" r_length="244" r_score="0.947"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="-" ref_id="SGN-U594996" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>746</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U594996" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="78117" e_stop="77751"/>
          <exon e_start="76627" e_stop="76552"/>
          <exon e_start="75706" e_stop="75648"/>
          <exon e_start="74767" e_stop="74524"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGGAAGCCATCAAAATAGAAACATTCATAGAATGATAGTTCCATGAACTTTCCGAGAAACATCTCTTCATCTTCTTTCTTCTTTCAATTTTTTTCCCGCTTTCCCCTTTTTTCGCTCCTTTTTCTCACTTTCTTCTATCCACTGAGAAAAAAAGAAGAAAATTTTGAGTCTCACTATACGAAACAGACTGTTGAATAATCAAACAAAGAAAAAAGAAAGAAACTTTAGATCAGATCTGAAAATTTGAACAAGAGGAGTGTTTTAATAGTCAAAGAAAATGCAGACAAGGTATATGGAGAAACGTGTTTTGGATCCAAGTAGTAGTGAGGAAGGTCAACCTGATAGGAAAAGACCTGCTCTTGCAAGGTAATTTGATTTTTAAAAAAATGTTTTTTTTTTAGACTTTTTGTTGAGGGGTATTTTTTCTTTTGGTCTTGTTTTATGTATTATAGCAAATTTTAGTACTGAACAATGCAGTTGGTTTGTTTGAATGATTGGTTATTATGAAAGGTTTTGCTGGGAATATTTGTTGGTTTGAAGAAATTGTAGAGTTTGGGTATTGCAAAAATTATTGTGGAAAGGGGAGAATGGTGATTCTGTTTTGTTGGGGTGGTGGTGAATTAAAATTTTTAGTAAGAAAAATGTGATCTTGATGAATTATGTGTGACGAATGAGGTATTATTATCAAGATCCTTGGAGAGAAGAGAGTGGGAAGCTTTATTGTCTGGTTGTTTGGTGTTGACTGCAAGTGAAGGAAGTTTTTTGATTGAATCTGGCTTGATAACTAGCTTGCTCTTTGTTTTGGTTTATGAGAGAAAAATGAGTATTTTGCTTTGTCATAACTACAAACAATCTACTATTTGATCAGCTGTGGCACTGAAAGAAGAGATTTATAGTGGTTAATTCATGATTCCTTTTTAAGATTTGTGTCATTCGAGGAGGTGATTTGAAGGATTTTGATCATGTTGCAAATAACTTACAATGAATAACATTACATGACTGCCCCTGTCACAGCCCCACAGGACAGAAAGTGGTCCACTAGATCAACTTTTAAATGGGATCTTCACTGTTGGTTGCCAATAAGATTATCCACATTTCATATTCTCAATCATCATTCAGAGGGGAAGTTGTCTCGGTATCCTGCCGGGGACATACTTGAGATTTCTAAGGGAAGTCATTACCAGGTGTTTGTAATCCTGCAAACACTTGTAGCTTTCTCTGAGTGTCTAAGTGATAGATTGATGGTCCACTCTACCCTTTTCTTTTTCTCTTAGCAAGTGATCAGAAAAAAGCTTTTCATTTTAGAGGTTTTTATTTCTGTTGATTGTTTGTTGTGGTATCATCTGACCTGACATCATGTGACCTGGATGTCTTATATTTTCTTAGAGAAGCTGAAATTCAGTGCCCTGTTATAGCTTTACTCATCTTTCTGTGCACTGTTCATGTTAACTGTTGCACACCCTTATTGAAAAGTACATGGTTACTGCAGTGTCATTGTTGAAGCGCTAAAGGTGGACAGTCTGCAAAAACTCTGCTCATCACTGGAGCCAATTCTTCGAAGAGTTGTAAGATTATTAGGCCCCCTTTAGAACTCTCATCCTATTCATTGGGCATTACTTATGTGAAATTTCATTTAACCAACCAACCACTCCATGGTAACTTGTGAAAGTTTGGTTTTCAATTACATAACTACTGTGGCATGATACATATTTCCAGAAGACTCAGCATGACAGATATTTTACTTCTGAAGGAATACAATGAAATAATCGTAACTGCAAGCTTTGTGACTATACAGGCCAAGTAAAGCCACTGCCAGATATTTGAAATGGATATGTCATTGTTTTGTGTAAAACCATTTATTTCATATGCTGAAATATTTTTTCAAACTATTTGTGCTTTGATCATTGTAGCAGTTACACTGAGAAACCCCTCCCCCCTCCCTCTCTCTCACCAGCGAGAGCTGTCTCCATATCCTGCTTATATGCATAGTTTCTGGAGATAAGTAGCTTTAAATTTTCCTGTCAAGAGCTTACTGAGTGCAGAAATTTACTTCTGTCTTTATTTTTGATGTGAACAACATATTTTAAGCATGTCTGCGCTCCAGGTGACCTTTTAGCAGTTCTTCTCTTGGACTCAAAATGTATTTGAGTTGGTAGTAAAAAGACTTTTGCGTGTTACCATGGCTTTATTCAACTTTTAGCTGTAAGAGCTAAGATATTAATGTCTTATGTACATTTACTTGAAACATTTGGATTCGATGGGCTTGTCACCAGCCCATCGAATGCTAATATTTTATGTGATTGGGATGACTAGACTATGCAAACATGTCCATTCGTGTTTTATTTGTACAAGGTTTCTTCTATAGTGGCTTTTGTTTACTTATTTATGAATGTCCATTTTTGTTTACCAGGTTAGTGAAGAAGTGGAGCGTGCTTTGGCTAAACTTGGACCTGCTAAACTTAATGCAAGGTATGGTTTCACATATCATCACTCAAACCTTTCAGAGCACAAATCTGATTCCCATATTTTGTCAGGATATTTGCATGTATGGGAAATATCCCATCACTCATCAGAGTCATTTGGTATATCCAATTGTGAACTGGTCAATGTTTAACTGAATTAGAGTGGGATATGAATTGTAGATGTTGGAAACACTTGAGGGGAGGTTTCCCTGGTCTTGTGCAATTATATATTTAGATTTAGGTAAGGTCAATATTTGTTACAGCAGTCAATCCCTATGATTAATGGGAGTGTGGGAGGGTTTGAGCACTTGCTGCAGCCAGAGTCAAAGGTAGATTAGTGAAACTAGTTACAGATGCAGGAAGTCAATTTAGGAAAGAACTAAATCTTAATAATGCTTTTAGAGTTTTGAAAAAGAGTTTTGCTAACATGAACCACAGACTACTAAAACCATTTACATGGACATGGTCCTATGTGTCTATCAGATTGTAATTGACTATTTATTTTGTTTGATATGCTTCTTATTATATAAGTTCCATGGTATTAAACCTTCTCACAGGGAATATCCTTCTGCTTCAGCGGTTTGTATGAGTCATTCTGACTTCTAGTTCATTTCAGTGCTAGAGCAGATTGATTTTCCCAATACTATGTGTGAAATGTGAAAAGACTTTTAGCAAGTCTCCTTCCCATTGGATACTGATCAAAGAATTGACCTAATATGCCAAACATTAGCATGACTATGAAGTGCAGTGTGAGGATGTGACCCCTAATTCAATTTTGCATCAAAGATCAATCTATGCCTATGCTTGCTTGAGCTGTTCATGTACTCCATTTTCTATAATTGAATGTTCACCCTGTTCCGGGATTGAATTTTGTGATAATTATGCAGGGTTTCGCCAAAAAGAATTGAAGGACCTGATGGGAGAAATTTGCAGCTTCAGTTTCGGTCCAAACTGTCACTACCTCTCTTCACTGGAGGAAAAGTAGAAGGAGAGCAGGGTTCCGCAATACATATTGTCTTGATTGATGGAAATACAAACCATGTTGTAACATCAGGTCCCGAGTCCTTGGTTAAGTTAGATGTTGTTGTGCTTGAAGGAGATTTTAACAATGAGGATGATGATGGCTGGACT</genome_strand>
        <mrna_strand>GAGGAAGCCATCAAAATAGAAACATTCATAGAATGATAGTTCCATGAACTTTCCGAGAAACATCTCTTCATCTTCTTTCTTCTTTCAATTTTTTTCCCGCTTTCCCCTTTTTTCGCTCCTTTTTCTCACTTTCTTCTATCCACTGAGAAAAAAAGAAGAAAATTTTGAGTCTCACTATACGAAACAGACTGTTGAATAATCAAACAAAGAAAAAAGAAAGAAACTTTAGATCAGATCTGAAAATTTGAACAAGAGGAGTGTTTTAATAGTCAAAGAAAATGCAGACAAGGTATATGGAGAAACGTGTTTTGGATCCAAGTAGTAGTGAGGAAGGTCAACCTGATAGGAAAAGACCTGCTCTTGCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCATTGTTGAAGCGCTAAAGGTGGACAGTCTGCAAAAACTCTGCTCATCACTGGAGCCAATTCTTCGAAGAGTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAGTGAAGAAGTGGAGCGTGCTTTGGCTAAACTTGGACCTGCTAAACTTAATGCAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTTCGCCAAAAAGAATTGAAGGACCTGATGGGAGAAATTTGCAGCTTCAGTTTCGGTCCAAACTGTCACTACCTCTCTTCACTGGAGGAAAAGTANAAGGAGAGCAGGGTTCCGCAATACATATTGTCTTGATTGATGGAAATACAAACCATGTTGTAACATCNNNTCCCGAGTCCTTGGTTAAGTTANATGTTGTTGTGCTTGANNNANANTTTAACAATGAGGANGATGANGGCTGGNCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U599305" ref_strand="+" ref_description="SGN-U599305 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157327882|emb|CAO16594.1| (e_value=2e-90) unnamed; (*ATH) AT4G21540.1 (e_value=2e-85) | Symbol: None | Encodes a putative sphingosine kinase (SphK) containing the five conserved domains (C1-C5) previously identified in SphKs. | chr4:11454787-11462602 FORWARD | Aliases: F18E5.160, F18E5_160; (*SWP) sp|Q86KF9|SPHKA_DICDI (e_value=9e-33) Sphingosine kinase A OS=Dictyostelium discoideum GN=sgkA; ">
      <seq>gatatggaggaagccgatctgcacccaaagtatttagtgacgatgtaaagcccctgctagaggatgcaaatattcactatacactgcaagaaactaaatatcggttacatgcaaaggaagttgctcattcgttggatcttttgcgatatgatggagttctttgtgtcagtggtgatggaattttggttgaggtagtgaatggactgcttgaaagggaggattggagtactgcaataaagatgcctcttggagtaatacccgcaggaacttcaaatgggatggccaagtctcttctagattctgttggtgaatcttgtactgcatttaatgcaactcttgctataatcagaggccacaagagatcactagatgtagctacagttttacaggggcagaaaaaatatttcagtgtgctgatgcttgcctggggtcttatagctgatatagatatagagtctgagaagtataggtggatgggtagtgctcgaatggatttttatgcaatacagcggatattttgtcttagaaagtatcatggctgtatcaaatttgtggctgcaccagggtttgaaaattttggagaaccaaatgaacttggaggtgaaattgatgagcttaactcgaaatttgttatgcaagatggctattgtggtcccacttttgacatgaaggttttcaaccgcaagaattgagggccttttgtctcaatctggcttcataatgtaccttggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="82689" stop="86169"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82988" g_stop="83077" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="90" r_length="90" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="83078" i_stop="83173" i_length="96">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.707" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="83174" g_stop="83274" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="91" r_stop="191" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="83275" i_stop="84134" i_length="860">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="84135" g_stop="84207" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="192" r_stop="264" r_length="73" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="84208" i_stop="84633" i_length="426">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="84634" g_stop="84720" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="265" r_stop="351" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="84721" i_stop="84833" i_length="113">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="84834" g_stop="84911" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="352" r_stop="429" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="84912" i_stop="85041" i_length="130">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="85042" g_stop="85112" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="430" r_stop="500" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="85113" i_stop="85636" i_length="524">
            <donor d_prob="0.810" d_score="1.00"/>
            <acceptor a_prob="0.849" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="85637" g_stop="85869" g_length="233"/>
          <reference_exon_boundary r_type="cDNA" r_start="501" r_stop="732" r_length="232" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-U599305" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>733</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U599305" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82988" e_stop="83077"/>
          <exon e_start="83174" e_stop="83274"/>
          <exon e_start="84135" e_stop="84207"/>
          <exon e_start="84634" e_stop="84720"/>
          <exon e_start="84834" e_stop="84911"/>
          <exon e_start="85042" e_stop="85112"/>
          <exon e_start="85637" e_stop="85869"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATATGGAGGAAGCCGATCTGCACCCAAAGTATTTAGTGACGATGTAAAGCCCCTGCTAGAGGATGCAAATATTCACTATACACTGCAAGGTTTGCAATATTAAATATCTTATTCATGTGTAACAGTTGGTTTTTCAGTGATTCTTTTTGTGTCATTAATCTTGCCTTTTAATCTTCCCCTCTCAGAAACTAAATATCGGTTACATGCAAAGGAAGTTGCTCATTCGTTGGATCTTTTGCGATATGATGGAGTTCTTTGTGTCAGTGGTGATGGAATTTTGGTTGAGGTAAGTTGGCATGTCTATTCTTGTTTTTGATATCTTCTGTATGACCTATTGTTGTTTGCCTTTCACTTGAACAATTACGCTATAACAACTACTTTTTGTCATATATTTGATCATGGAATACCTAACTTAATTGTTGACTGGCATGTTATGCTTTCCTGATGAAAAACTCAAGATATTTCAGTTTATATATTGTTCTGATTTAAAGATATCAAAGATGAACCTACAGTGGGATAACTGCTATATAAAACTTATTCCTTCACCAGCGGTTTTTCCTGACTTTTACCCAGCTTCACTTCAAACATGAAACTGCTGAAAGGAGTTGCTGAATGCGAAGGAATAAATTTGTAGTATCATGGTTAAATGAAAAACAATTGAAAGATAAACTGATTGTGTTTATTCCAAAACTTTAGAGGGCTTATATGTAGGTATCTTATTCTCGTGCTTCAACTTCTGAAATGCATACAAAAAGAGAAGCACAGAGGCTTATCCCCCCCTCCCCCCCCCCCCCCCCCACAAGGAAAAAAACAGAGTAAGTATATTGCACTGATGTAGTTGAGAACTTGACATTTCTTAGAGGTCAGTCCTGGAACAACTTCAAAGTTGCTCCAGTGATATTGATGGTAGCCACAACATGGGTACAAAATCTCTGTTCTTCACTAATCCTGTATTCTAGAAGGTCTGTTCCCTGAGGGATCTATCTTTAAGATTTTTGGCTTATTATTTATTGTCGTAAATGGATGATAATCAGAGGGTCCGACTCCTCTTGCGCACTTGTGATAAAAGTTTCCTGATCAATAAGAGAAATGGATGATAACCAACCAGTGATCCTCTTACTTTCATGTTTTTACAATTTTTAGTAGGTAGTGAATGGACTGCTTGAAAGGGAGGATTGGAGTACTGCAATAAAGATGCCTCTTGGAGTAATACCCGCAGGTATATTTTCTTCTCTTGCTGGTGCTTGCCTTTAGTAAACACTAAGCGGGTCTGTATATTTTGCTTAGCTTTTATTGTGGAGCTTGATATACATTATTTTGGTTTTGTCACATTAAGCTTTTAATCACATTGTTATACCTATATAGTATGTTAAACCACCAGATAAGCACTTCCATCTAATTTCTAAAAGGTGGTCAAGGGAACGAGGTGGTGAAACACATGTAACTTGACACAACTTTCAGAAATTAGACTGAAATGCTGATCTGGTTTCTTATATACATTATACATAGTTTGATCTGTAACTTCTTATACAGTATAATGTACATATTTTGGTTTGTAACTTCTTACAAACATTTTTGCACATGGAAGCTATTATTTACTTTCTTCTACTGTTCTATAATTGCATTTTTGTGTATGCTAATGCAGGAACTTCAAATGGGATGGCCAAGTCTCTTCTAGATTCTGTTGGTGAATCTTGTACTGCATTTAATGCAACTCTTGCTATAATCAGAGGTAAATATCCTTTTAACAAAAATGTGTATTCCTGAACTGGAGTTTTAATTGAATTACTATTCTTGTTGAATGAAAGAAGACTTTTATATCTATGCATGTTTGGTCTATGGCAGGCCACAAGAGATCACTAGATGTAGCTACAGTTTTACAGGGGCAGAAAAAATATTTCAGTGTGCTGATGCTTGCCTGGGGTATGTATATCTGACATTGTCTCTGGTGGTTTTGATACCTTTTTTGTTTCATTTAATGCAATGTGATGCACTTATTGTTGCAAATTGAAATATCATACTAAACTATCTGACAGGATTCGTTGTTTTTCAGGTCTTATAGCTGATATAGATATAGAGTCTGAGAAGTATAGGTGGATGGGTAGTGCTCGAATGGATTTTTATGTATGTTCTAAATCTATTTCCTCTAATATATATTTTTCTTAGATTTCAGTATCAGAACTTACACCCTTTGTGTAGTTTGTTATGAATATACAAATATGTTACCTGTTTCAAAAAAACGCTGTACCTCCATATTTCCTCACTGGATTTATTTACAAATTTTCTGCTTGCTGTAGAACTTCATTCCTTGATCTCTCTCTCTCTCTCTCCCTCCTCTCTTTTTGCACCTTGCTCCTTCTCGTTTTTTGGAAGGTTTGGTCTCATTACAATATTCGAGATTCACTGACCCAGAAATTTGCCAGTATTTTGTGTACCTGAACCGTTCTTCATGGACAATAGTTCCACCCCCCTTCCATCCTATCTTTTTCCAGGAGAAAAAAAAAATGAAAGAAAGAAAAAGACAAAGTTGAATGTCTCTTCAGTTGATTGCATGATTCATGGTTCTAAGATACAGAGGGAATCTAATATATGGCTATTGAAGCATCATGGCTTGCTTTTTAATTGCTAGTCTTTTGTTATTGGTCCAGGCAATACAGCGGATATTTTGTCTTAGAAAGTATCATGGCTGTATCAAATTTGTGGCTGCACCAGGGTTTTGAAAATTTTGGAGAACCAAATGAACTTGGAGGTGAAATTGATGAGCTTAACTCGAATTTGGTTATGCAAGATGGCTATTGTGGTCCCACTTTTGACATGAAGGGTTTCAACCGCAAGATTGAGGGGCCTTTTGTCTCAATCTGGCTTCATAATGTACCTTGGG</genome_strand>
        <mrna_strand>GATATGGAGGAAGCCGATCTGCACCCAAAGTATTTAGTGACGATGTAAAGCCCCTGCTAGAGGATGCAAATATTCACTATACACTGCAAG................................................................................................AAACTAAATATCGGTTACATGCAAAGGAAGTTGCTCATTCGTTGGATCTTTTGCGATATGATGGAGTTCTTTGTGTCAGTGGTGATGGAATTTTGGTTGAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGTGAATGGACTGCTTGAAAGGGAGGATTGGAGTACTGCAATAAAGATGCCTCTTGGAGTAATACCCGCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTCAAATGGGATGGCCAAGTCTCTTCTAGATTCTGTTGGTGAATCTTGTACTGCATTTAATGCAACTCTTGCTATAATCAGAG.................................................................................................................GCCACAAGAGATCACTAGATGTAGCTACAGTTTTACAGGGGCAGAAAAAATATTTCAGTGTGCTGATGCTTGCCTGGG..................................................................................................................................GTCTTATAGCTGATATAGATATAGAGTCTGAGAAGTATAGGTGGATGGGTAGTGCTCGAATGGATTTTTAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAATACAGCGGATATTTTGTCTTAGAAAGTATCATGGCTGTATCAAATTTGTGGCTGCACCAGGG-TTTGAAAATTTTGGAGAACCAAATGAACTTGGAGGTGAAATTGATGAGCTTAACTCGAAATTTGTTATGCAAGATGGCTATTGTGGTCCCACTTTTGACATGAAGGTTTTCAACCGCAAGAATTGAGGGCCTTTTGTCTCAATCTGGCTTCATAATGTACCTTGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U602135" ref_strand="+" ref_description="SGN-U602135 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>ctctctctctaaaatctttcagtctctgcaaattaaaccctcttttgctctctctaatggctaaaatttatcaatcactccgtcacttcattttctctctctagaatttgttcatctctctagggtttcagttttcactttcctttctttcgctatctcttacgagaattttccctgttgaaccaaaaaaacttttccttttcgttccctttttttttgtttggttttattcacaccgtttgtaagtgtttttttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="91598" stop="92455"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91898" g_stop="92155" g_length="258"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="258" r_length="258" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-U602135" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>258</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U602135" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91898" e_stop="92155"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTCTCTCTAAAATCTTTCAGTCTCTGCAAATTAAACCCTCTTTTGCTCTCTCTAATGGCTAAAATTTATCAATCACTCCGTCACTTCATTTTCTCTCTCTAGAATTTGTTCATCTCTCTAGGGTTTCAGTTTTCACTTTCCTTTCTTTCGCTATCTCTAACGAGAATTTTCCCTGTTGAACCAAAAAAACTTTTCCTTTTCGTTCCTTTTTTTTTTGTTTGGTTTTATTCACACCGTTTGTAAGTGTTTTTTTTTT</genome_strand>
        <mrna_strand>CTCTCTCTCTAAAATCTTTCAGTCTCTGCAAATTAAACCCTCTTTTGCTCTCTCTAATGGCTAAAATTTATCAATCACTCCGTCACTTCATTTTCTCTCTCTAGAATTTGTTCATCTCTCTAGGGTTTCAGTTTTCACTTTCCTTTCTTTCGCTATCTCTTACGAGAATTTTCCCTGTTGAACCAAAAAAACTTTTCCTTTTCGTTCCCTTTTTTTTTGTTTGGTTTTATTCACACCGTTTGTAAGTGTTTTTTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U585712" ref_strand="+" ref_description="SGN-U585712 Tomato 200607#2 [4 ESTs aligned] (*GB) gi|218199845|gb|EEC82272.1| (e_value=5e-47) hypothetical; (*ATH) AT4G32010.1 (e_value=2e-32)  Symbol: None | transcriptional factor B3 family protein, low similarity to FUSCA3 (Arabidopsis thaliana) GI:3582518, VIVIPAROUS1 protein (Triticum aestivum) GI:7801376; contains Pfam profile PF02362: B3 DNA binding domain | chr4:15479530-15485359 FO... ; ">
      <seq>cgaaaagttcctgacaatgttgaccttccatcgagatggacttgttcagacaactcatgcgaccccgagaggtctgtgtgctcagcagttcaagaattaacagcagatcatctgagggacctactacctcatattaataaagcttccaagaaaaggaaggcttctaaacaggaaatggacttggttgaaactctggatgggcttgatgcccttgctcatctagctatcctagaagagggagagacccttccagcatcaccacaggccacaactaagcatccacgtcatagacctgggtgtacatgcattgtctgcatccagccccctagtggaaaaggtcctaagcacaagcaatcatgtgattgtaacgtctgtaaatcagtaaagcgtcgtttcaaaacattgatgatgaagcgtgaaaaaaagttatcagagaaagaagcagaagctacttgtcaaaagctgcagccgcaatcagctgggcaattgcttgatgctgatgacattcaagaacctattgatgatgcagtgcattcaagccctcagcatgaagagctgaacattgaaggttctgttgatcccaattaccttaatgagaagaaatcttctgttgaggatcccaattaccttgatgagaagaaatcttcagttgatgacacaaattaccttagtgagaagatatcttctgttgatgaccccagctaccttaatgagaaggaatcttctgttgatgatcccaacatcctgaatgagaagaaatcttctgttgatgatcctaactgcctgaatgagaagaaatctgctgttgatgatcccaactacgtggatgagaggaaatcttctgttgatgatcccaattgccttaaggagaagaaatcttctgcttcaccatttaaaggtgaatttgacctgaatgctaagccagatagggacgacgagctttcaccaggctctgattctggtagcatgatgcgcatgatcaaacgtgctgctgagcaatatgtcaggcactgtgataatggaagttccgtgggtaaccaaagagatggagatggtgctggggagacaaatccgggtaattgtgttattgttagtggtagtcatcaagctgatgtagatcataataggcctttacccataagcgctgctgcatctttggcacctaatgaccagtaagttgctccctacatgaggcacctaaattagctgtgctatattaaaaaccagaggtactccgcagtgtatggaaatttgtacattttggctttgctggcgtcatgcattgtacatagatagacgtagcaagtagcaactgatgtaatctttctgcaatccacaggttgcattttgcaatggccgcgaggtgccttacatatttattatataaatgggtggaaaggtttttgggagtttaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="100247" stop="103254"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100547" g_stop="100617" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="71" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="100618" i_stop="101485" i_length="868">
            <donor d_prob="0.944" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101486" g_stop="101556" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="72" r_stop="142" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="101557" i_stop="101683" i_length="127">
            <donor d_prob="0.918" d_score="1.00"/>
            <acceptor a_prob="0.942" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="101684" g_stop="102940" g_length="1257"/>
          <reference_exon_boundary r_type="cDNA" r_start="143" r_stop="1399" r_length="1257" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-U585712" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1399</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U585712" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100547" e_stop="100617"/>
          <exon e_start="101486" e_stop="101556"/>
          <exon e_start="101684" e_stop="102940"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAAAAGTTCCTGACAATGTTGACCTTCCATCGAGATGGACTTGTTCAGACAACTCATGCGACCCCGAGAGGTATGATGGAAATTCTTTAACCTACCTAAGATGCAGTTAAAATGTCAATAGAATACATGAAGGAAAGCGCACATGCTTTTGTTAGTGTAAATGCTGAAGTGGATTGCATTAAGCAATCTGGACAAGCCAAAACCTCTAACTTCAATAATCAAGCTTGTCAGTGGAAGAAAAGGTTGTACTGGTGAATTACTCCTCATGAAATGTGCTTCATAGGTAGGAGTAAGGTCTGCAACATTCTACTCTCCCCAGTCCTACTTGTGGGATTACACCGGAGATGTGGTTGTTGTTGTTGAAATGTGCTTCTGATATTAGATATTGAAAATCATTTTAAAAATTGTCCTGCAGACACAAATTTATCCTTTTTCTTTCCAAAGTCTAACTGAACCTTGCTATTTGGAATTGGCAACCTGATGAGGTTTTCTATGGTTGGTTTCTCCCCTTTTCTTTTAGCAGTTTGTCCCTTTAATCAACTCTGTAGCATTCTTCTTCTCTCTCCAATTTTCTATTCTTTCAGAAAGTTAACTTTGAACCACCTTCATCACCTGTGCCTGCATTATATGAGTTTCCATCATTAGAAAAAAAAAAACTTCGTCAGTTTCCATTTTCTACGATTCTCGTTTTCTTTAAGTTACATCTGGCTGTCTTTTGCTTTAATAGAAATAAACTAACGTCTGTTCATTTCCATCCTGATAAAAAAAAAAGTTTGTCTCCAAAATAGTATTGACAATTCCTGAATGATCTTTATCATAGATAGAAATACACAAAGTTATCAATCTTTTTTTAAAAAAAAGTATTGACAATTCCTGAAATTCAGTCAAGTATTCAATTGCAGTTTGAGTATTTGGGTTATGATCTTTCTTCTTTTTAGGTCTGTGTGCTCAGCAGTTCAAGAATTAACAGCAGATCATCTGAGGGACCTACTACCTCATATTAATAAAGGTAAAAGTGCTTGCTCGTGTAGGTCATAAATTTCTACACTATTGAACCGGTGCTTATGTGTCTGCCTCATCTTGACAATGAATTGCAAGTCCTTCAGGTTTACTGAAGTTATATGATTCTTTTGCAGCTTCCAAGAAAAGGAAGGCTTCTAAACAGGAAATGGACTTGGTTGAAACTCTGGATGGGCTTGATGCCCTTGCTCATCTAGCTATCCTAGAAGAGGGAGAGACCCTTCCAGCATCACCACAGGCCACAACTAAGCATCCACGTCATAGACCTGGGTGTACATGCATTGTCTGCATCCAGCCCCCTAGTGGAAAAGGTCCTAAGCACAAGCAATCATGTGATTGTAACGTCTGTAAATCAGTAAAGCGTCGTTTCAAAACATTGATGATGAAGCGTGAAAAAAAGTTATCAGAGAAAGAAGCAGAAGCTACTTGTCAAAAGCTGCAGCCGCAATCAGCTGGGCAATTGCTTGATGCTGATGACATTCAAGAACCTATTGATGATGCAGTGCATTCAAGCCCTCAGCATGAAGAGCTGAACATTGAAGGTTCTGTTGATCCCAATTACCTTAATGAGAAGAAATCTTCTGTTGAGGATCCCAATTACCTTGATGAGAAGAAATCTTCAGTTGATGACACAAATTACCTTAGTGAGAAGATATCTTCTGTTGATGACCCCAGCTACCTTAATGAGAAGGAATCTTCTGTTGATGATCCCAACATCCTGAATGAGAAGAAATCTTCTGTTGATGATCCTAACTGCCTGAATGAGAAGAAATCTGCTGTTGATGATCCCAACTACGTGGATGAGAGGAAATCTTCTGTTGATGATCCCAATTGCCTTAAGGAGAAGAAATCTTCTGCTTCACCATTTAAAGGTGAATTTGACCTGAATGCTAAGCCAGATAGGGACGACGAGCTTTCACCAGGCTCTGATTCTGGTAGCATGATGCGCATGATCAAACGTGCTGCTGAGCAATATGTCAGGCACTGTGATAATGGAAGTTCCGTGGGTAACCAAAGAGATGGAGATGGTGCTGGGGAGACAAATCCGGGTAATTGTGTTATTGTTAGTGGTAGTCATCAAGCTGATGTAGATCATAATAGGCCTTTACCCATAAGCGCTGCTGCATCTTTGGCACCTAATGACCAGTAAGTTGCTCCCTACATGAGGCACCTAAATTAGCTGTGCTATATTAAAAACCAGAGGTACTCCGCAGTGTATGGAAATTTGTACATTTTGGCTTTGCTGGCGTCATGCATTGTACATAGATAGACGTAGCAAGTAGCAACTGATGTAATCTTTCTGCAATCCACAGGTTGCATTTTGCAATGGCCGCGAGGTGCCTTACATATTTATTATATAAATGGCTGGAAAG</genome_strand>
        <mrna_strand>CGAAAAGTTCCTGACAATGTTGACCTTCCATCGAGATGGACTTGTTCAGACAACTCATGCGACCCCGAGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTGTGTGCTCAGCAGTTCAAGAATTAACAGCAGATCATCTGAGGGACCTACTACCTCATATTAATAAAG...............................................................................................................................CTTCCAAGAAAAGGAAGGCTTCTAAACAGGAAATGGACTTGGTTGAAACTCTGGATGGGCTTGATGCCCTTGCTCATCTAGCTATCCTAGAAGAGGGAGAGACCCTTCCAGCATCACCACAGGCCACAACTAAGCATCCACGTCATAGACCTGGGTGTACATGCATTGTCTGCATCCAGCCCCCTAGTGGAAAAGGTCCTAAGCACAAGCAATCATGTGATTGTAACGTCTGTAAATCAGTAAAGCGTCGTTTCAAAACATTGATGATGAAGCGTGAAAAAAAGTTATCAGAGAAAGAAGCAGAAGCTACTTGTCAAAAGCTGCAGCCGCAATCAGCTGGGCAATTGCTTGATGCTGATGACATTCAAGAACCTATTGATGATGCAGTGCATTCAAGCCCTCAGCATGAAGAGCTGAACATTGAAGGTTCTGTTGATCCCAATTACCTTAATGAGAAGAAATCTTCTGTTGAGGATCCCAATTACCTTGATGAGAAGAAATCTTCAGTTGATGACACAAATTACCTTAGTGAGAAGATATCTTCTGTTGATGACCCCAGCTACCTTAATGAGAAGGAATCTTCTGTTGATGATCCCAACATCCTGAATGAGAAGAAATCTTCTGTTGATGATCCTAACTGCCTGAATGAGAAGAAATCTGCTGTTGATGATCCCAACTACGTGGATGAGAGGAAATCTTCTGTTGATGATCCCAATTGCCTTAAGGAGAAGAAATCTTCTGCTTCACCATTTAAAGGTGAATTTGACCTGAATGCTAAGCCAGATAGGGACGACGAGCTTTCACCAGGCTCTGATTCTGGTAGCATGATGCGCATGATCAAACGTGCTGCTGAGCAATATGTCAGGCACTGTGATAATGGAAGTTCCGTGGGTAACCAAAGAGATGGAGATGGTGCTGGGGAGACAAATCCGGGTAATTGTGTTATTGTTAGTGGTAGTCATCAAGCTGATGTAGATCATAATAGGCCTTTACCCATAAGCGCTGCTGCATCTTTGGCACCTAATGACCAGTAAGTTGCTCCCTACATGAGGCACCTAAATTAGCTGTGCTATATTAAAAACCAGAGGTACTCCGCAGTGTATGGAAATTTGTACATTTTGGCTTTGCTGGCGTCATGCATTGTACATAGATAGACGTAGCAAGTAGCAACTGATGTAATCTTTCTGCAATCCACAGGTTGCATTTTGCAATGGCCGCGAGGTGCCTTACATATTTATTATATAAATGGGTGGAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U583936" ref_strand="+" ref_description="SGN-U583936 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|157357899|emb|CAO64911.1| (e_value=3e-16) unnamed; (*ATH) AT1G79560.1 (e_value=8e-13) | Symbol: FTSH12 | encodes an FtsH protease that is localized to the chloroplast | chr1:29931687-29937899 FORWARD | Aliases: T8K14.2, T8K14_2, EMB1047, EMBRYO DEFECTIVE 1047, FTSH12; (*SWP) sp|Q9SAJ3|FTSHC_ARATH (e_value=6e-12) Cell division protease ftsH homolog 12, chloroplastic OS=Arabidopsis thaliana GN=FTSH12; ">
      <seq>gttacagcctgccatgttcgaagattttgtgaagcctttccaaataaacatggaggaggaaggaccattgcctcataatgaccgtttgagttatcaaccgctggacatttatcctgcgcccctccacagaagttaacatcaatggtgggtgtttgagttttctggtcagaccgacatcggaagttgcctagtagtgaatgttgaggtttagagacaatgtcctttttcacatcaactctgaccaaaacctttgcaaaccaacagaaaggctgcttagtagatagtaaggttgggttgcaaatgttccattttttattatttaggcacatttttgtttcttctttccttcttttgctctcttttcttttcccttaatttatttcatggtttaaatagagcaactttgtacaagaaagaccaatgagaatcgaaaatgtaaaatttggctatttatataagttaatgttaagtatatattcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="-" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="117868" stop="116438"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="117568" g_stop="117511" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="58" r_length="58" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="117510" i_stop="117160" i_length="351">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="117159" g_stop="116737" g_length="423"/>
          <reference_exon_boundary r_type="cDNA" r_start="59" r_stop="481" r_length="423" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="-" ref_id="SGN-U583936" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>481</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U583936" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="117568" e_stop="117511"/>
          <exon e_start="117159" e_stop="116737"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTACAGCCTGCCATGTTCGAAGATTTTGTGAAGCCTTTCCAAATAAACATGGAGGAGGTAATATAATATTTTCAGATTCTCAATCTTCATATTTACTTTCAAGAGATAATGTGAAGTCTTTATAACAATACCATTCTCTTTAGAAACGTGAGAATAGGGATAATATAGAATGTGTACAATGCAACCCAGTAATATGTCTGCTGTTATTTTTGTTTTAAACATCCTGTTGCTTTGCATGACGGGGATGGGGCTCTCAAAGTAGATTGTACGAGGCTTGTCGCGTGCTTTTGCTTAATGATCTGAGTCAGGGGCAACCTTCTTCCTTGTGAATATTTTTAGCTCGCAATCTCATGCAGATTTTGATTTTCTCAATTGTACTGTGCCTATAAAAATGTTTTAAATTCTCAGGAAGGACCATTGCCTCATAATGACCGTTTGAGTTATCAACCGCTGGACATTTATCCTGCGCCCCTCCACAGAAGTTAACATCAATGGTGGTTGTTTGAGTTTTCTGGTCAGACCGACATCGGAAGTTGCCTAGTAGTGAATGTTGAGGTTTAGAGACAATGTCCTTTTTCACATCAACTCTGACCAAAACCTTTGCAAACCAACAGAAAGGCTGCTTAGTAGATAGTAAGGTTGGGTTGCAAATGTTCCATTTTTTATTATTTAGGCACATTTTTGTTTCTTCTTTCCTTCTTTTGCTCTCTTTTCTTTTCCCTTAATTTATTTCATGGTTTAAATAGAGCAACTTTGTACAAGAAAGACCAATGAGAATCGAAAATGTAAAATTTGGCTATTTATATAAGTTAATGTTAAGTATATATTCAT</genome_strand>
        <mrna_strand>GTTACAGCCTGCCATGTTCGAAGATTTTGTGAAGCCTTTCCAAATAAACATGGAGGAG...............................................................................................................................................................................................................................................................................................................................................................GAAGGACCATTGCCTCATAATGACCGTTTGAGTTATCAACCGCTGGACATTTATCCTGCGCCCCTCCACAGAAGTTAACATCAATGGTGGGTGTTTGAGTTTTCTGGTCAGACCGACATCGGAAGTTGCCTAGTAGTGAATGTTGAGGTTTAGAGACAATGTCCTTTTTCACATCAACTCTGACCAAAACCTTTGCAAACCAACAGAAAGGCTGCTTAGTAGATAGTAAGGTTGGGTTGCAAATGTTCCATTTTTTATTATTTAGGCACATTTTTGTTTCTTCTTTCCTTCTTTTGCTCTCTTTTCTTTTCCCTTAATTTATTTCATGGTTTAAATAGAGCAACTTTGTACAAGAAAGACCAATGAGAATCGAAAATGTAAAATTTGGCTATTTATATAAGTTAATGTTAAGTATATATTCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U574669" ref_strand="+" ref_description="SGN-U574669 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|18412421|ref|NP_565212.1| (e_value=2e-74) FtsH protease, putative [Arabidopsis thaliana]; (*ATH) AT1G79560.1 (e_value=2e-76) | Symbol: FTSH12 | encodes an FtsH protease that is localized to the chloroplast | chr1:29931687-29937899 FORWARD | Aliases: T8K14.2, T8K14_2, EMB1047, EMBRYO DEFECTIVE 1047, FTSH12; (*SWP) sp|Q9SAJ3|FTSHC_ARATH (e_value=1e-75) Cell division protease ftsH homolog 12, chloroplastic OS=Arabidopsis thaliana GN=FTSH12; ">
      <seq>ggctgcacgaatcaatgaaatgttttctgttgctaggagaaatgctccagcttttgtatttatagatgagattgatgctattgctggaaggcatgcaagaaaggatccacgcaggaaggcaacatttgaggctctgatttctcagcttgacggggagaaagaaaaaactggtgttgataggttttcactaagacaagctgtcatattcatctgtgcaaccaatcggccagatgaactggacttagaatttgtcccgccctggacgtattgacagacgtgtgtatattggtttaccagatgcaaagcaacgagtgcaaatttttggagttcacagtgctgggaaacagctttccgaggatattgcctttgagaaacttgtctttcgtacagttggatattctggggcagacataagaaatctagtcaatgaagctggaataatgtctgtaagaaaaggacattctaagatcaaccagcaggatatcgtcgatgttttggacaagcaattgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="-" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="128578" stop="123225"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="128279" g_stop="128237" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="43" r_length="43" r_score="0.977"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="128236" i_stop="127021" i_length="1216">
            <donor d_prob="0.991" d_score="0.98"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="127020" g_stop="126908" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="44" r_stop="156" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126907" i_stop="126246" i_length="662">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.880" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126245" g_stop="126029" g_length="217"/>
          <reference_exon_boundary r_type="cDNA" r_start="157" r_stop="374" r_length="218" r_score="0.986"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="126028" i_stop="124675" i_length="1354">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.946" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="124674" g_stop="124603" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="375" r_stop="446" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="124602" i_stop="123590" i_length="1013">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.164" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="123589" g_stop="123525" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="447" r_stop="511" r_length="65" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="-" ref_id="SGN-U574669" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>510</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U574669" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="128279" e_stop="128237"/>
          <exon e_start="127020" e_stop="126908"/>
          <exon e_start="126245" e_stop="126029"/>
          <exon e_start="124674" e_stop="124603"/>
          <exon e_start="123589" e_stop="123525"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCTGCACGAATCAATGAAATGTTTTCTGTTGCTAGGAGAAATGTAAGTCTACTTCTTCTAATAAAAAAATTGACATCATATAGGGATGGGAATGTTCCTCAAAGTAAAAAAATTGCATCTTATGATTTCTATACCGAAAGCAGCTACCAGTCAAATGTTAAAGGGGGTGGGGGGGGGGGGGGGTAAGTCTCCAAGGAAACTTCTAAACCAGTAACAAATATTCAGTCTAACTCAAAACCAGAAACTTATTTTTGTCTAGTGTGCTTTTACGATGCATTAAGCATAAGTTACTTTAGCTGTTAGTCTTTTTTCAATTTATGTTAAACTCTTGGTCTCACTATTTGAAGTTTGAACCAAACACGAATAACCAGGTCTTGAGCATGCTGAGTAACTACTGGGGATGAAGTACAACAACAACAATCCAGTATATTCCCTCATGTGGAGTCTGTGGAGGGTCAGGTGTACGCAGATTCCTACCTTGAGGGGGTATAGAGGTTGTTTTCCGATATACCCTTGGTTCGAGAATAGTTTTGAAAGAAGAACAAGAGTAAAAATCAATGATGAGGATAATGAAGAAAGTAAAGCACTGAGAGTAAAATAGTGTAGATAACCAAAGTAAATGAAACATCACCAGTGTTTTGGAGAGTGAGAAGCGGAAAAGAGCGACAAGGGCTCGGCGTGAAGCAAAGCACACTTCTTTCAACTGAACTGCTATTCAATACAAAAATAAAGAAATATCAAATATGTTTTACTATCTTACCTAATTTGGCCCACTTCGTGCCCCAGAAGGTAGCACTTAATACGAAAATATTAGCCATGTGGGTGCATATACTGGCTGGTACTTCTTGCGGTAGCGGAAGCTATTTGTGTCTACTAAGATCGTAGATGTTTTGATACCATGTGAAAATAATTAAAAAACTTCTCATGAACTTGATTAACAAGGTACAAGAGGTGGTCCTTATAGGAGTATTAGGTTACATATAGTAAGAAGGTAATCGATCTCTATGCTGATAAGGTTAATAAATTCTATTTATTAAATACAATATATGCTAAGGTACCTTATAAATTTTTTAAAATGAATTTCCTTGGGTTGAGGCCCTTTTCCCAACCCTACTGCATTTATGACCGGTCTGCCTTTTTTTTTTAATGTACAAGAAACAAGATTATATGAATCTAGACACATATTTACTCGTAATTCAACAATTTACTTTTGCTAATTCAAGGGGATAAAATTTACATTCAGTTGTCCTCTTTGTAGGCTCCAGCTTTTGTATTTATAGATGAGATTGATGCTATTGCTGGAAGGCATGCAAGAAAGGATCCACGCAGGAAGGCAACATTTGAGGCTCTGATTTCTCAGCTTGACGGGGAGTGAGTATCGTAATCTCATTTCATGGATATAATACTCTTCTTTGCAATGAAAATTTCATATTGGAGAACACTATAGTACAGCTGTTTTTGATGAGATCTGATTCTAGAATCTTATTCTGCAGTCTGGTTGATATGGCTTCTCAAAGAAGAACATTTCCCTTTCTTCCCTACCCTGTCTACAATCTTTAGCCAGTGAAATCTTTTGCTGTTGAATTATGCATTTTTATATTATGAGGCAATGAAAAATCTTGTGAACTTTGGAGTCTTTTGCTCTTTTTGTCGAACTATGAACAAATATGAGTTAATGTGTCTTGGCAAATTGACTAACTTGCAGCACCTAACAGTTTAATTAATATGTGGACATCACTTTATAATGTCCTTTAAGTGTTGTTTCAAAGAAGAGAAAATATGACGCATGTTCTGTTTGCATCTTCTGTTACGAGTTAGCAATATTTTCTCATACTGGAAACGCCAAGATTTCTGTGATTATTTATTTTGGTATGTTTATCAAGTGTACTGCTAGAGATAGAAATTACAGTAACATGCCTAGCAAAAAAGATTACTCTAATATTCTAGAGAAGTATTGAAGGCAAAGCCATTTTTTCTCTCCTATATCCCTGTATGGTTGTGCAGCCAAGATAATAAAGGACTTGTTTGTGCAGGAAAGAAAAAACTGGTGTTGATAGGTTTTCACTAAGACAAGCTGTCATATTCATTTGTGCAACCAATCGGCCAGATGAACTGGACTTAGAATTTGT-CCGCCCTGGACGTATTGACAGACGTGTGTATATTGGTTTACCAGATGCAAAGCAACGAGTGCAAATTTTTGGAGTTCACAGTGCTGGGAAACAGCTTTCCGAGGATATTGCCTTTGAGAAAGTAAATCACTTGCTTCATTACCCCTTTTTTTCCACTAATCCATTCATTCTTATTCATTACTGAGTCATTAAGTAATAAAAGCTACAAATGTAACATTTTTTTCAACCCAACAAAAGCACTACCCTTTAACTTGCCCAAAATCCAAACAACCCCAAACACCTGTCTAAGAACTAGTAAATTCGGCAACAGCCTTAGAGCGTGTTTGGTTTGACTTATTTTAGGTGCTTTTAAGATAAAATAGTTTTATAGCAGTTTTGGAGTGTTTGGATAAAATAAAAAAATGGTTTGGACTTGGGACTTCCATGTTGGATGTCTCAAGTTCGAAACCCCTTGCTAGCGAAAGAAAGGGGTTTGCCTTCTGGGTCGAGCTCGTCGCATCGGGCTTGCCTAGTGCTGGTTACCTCTCCTATGTAGTTTATTGCATAGGAGCGGGAGTTTTACCTTGTGCGGACCCAAAGGGTAGCGGCTGCGGGTTTCCCTTGTCATTAGAAAAAAAAAGTGCTTATAAGCACCTGTTTTAAGCCAAAATAACATAAATAACTTATGGCTTATAAGTCATAAGCCAAAAGCCAATCCAAACAGGCTCTTTGTCCTCTTAGTTCAGAAACATCATGTTTAGCCAACTCACCGGACAACAAAAGCCTAACAGCAGTCTGAATTTCCCTAGAAGTGATAGTAGGCTTCTTATTATACCTAGCCAATCTTGAAGACTCCTGAGCAAGCTTCTCAACTATATCATTGATGAAATTGTTCATGTTCCCCATAGTCTTGCTTGAAATATCAATATCTGGGTGAACTTGATTCAGCACCTTGAAAATGTAGATGTAAGTCTCAACAGTCAACACTCTTTTCATTGTCAGCACCACCAGCACCTGATTTCTTTGGTAACTTCTTCCCTGCCCTTGGATTCTTCTCTGCTGGTGCTTTTTCAGCCTTTCCTCCTCTGTTGCTGCTGGTTTCCTCTCTGCTGGATTTTTATCTGCTTTTTGTGCCAATGAAACAGAAATTCAGAATCTGAAAATGGGTTACTAAGAAAAGGGAAGTAAAAGATTCTTGGCTTGTGAAATGAGTTTGTCTTGGTGCTTCATTAGTTCTCATTGTTGGCTTGGGATCTCCTCTTCCAGTTGATTTGCTTGAATGTAAAATTACTTTCACGTTATATACAGCTTCTTTCAAGGGTTAGCAGCAACACTACTGCAGTGTAGTAACTGCACATGCCAAAAGCTAGTTGTTCCTTTCTTGTACTTAGTTGCTAGAAGACAATGATGTTCTTTTTGTTAGACTTAATGTATGCTCCATTTGGGCTCAGGTTTAGGAATTTGATTGTTGAACTGTATTCCTTGCACTTCTGCAGCTTGTCTTTCGTACAGTTGGATATTCTGGGGCAGACATAAGAAATCTAGTCAATGAAGCTGGAATAATGTCTGTAAGTTTGTTCTTTGTATTTTCCGTTGATATATAACGTCTCTACTCACTTTTGGAGCTTCATATTAGTTGACGGTTGACCTATTGTTTTCTTGACAAGTTCTGTTATCTTAAACAATGTATGTTATTGACAATTGACTTCAAATAATTAACATTGAGACTTGTAGAACACAACATACATTTTTTTCTTGTAAAAATGTATATTAGATTGCATATTTGAGATCATGTAATTAGCTTTTTGCTGTAACGGTAGACTTCACAGCATGATTTTCTTGGGAAAAAAAAAAGAAAATTTAATGGTGGATAGCGAGGAGTTTACCTTTTGGATCGAGCTCGTCGCATTGGGCCTGCCTAGTGCGGGTTAACTCTCTTGTGTGGTTTGCGAGTATTGCATAGGAGCAAGAGTTTTACCTTGTGTGCACCCAAAGAGTAGCGAGTGTAAGTTTCCCTTGACATCAAAAAATTAGGTGGTGGATAGGAAAACATAGAATATTTTAAGAGAAGTAAATGAGGCAAGCTTAGGTGGCTCCGACTGAAAGTTGTTGAGCAGATTCCTGGAAAGTAAACCAACGAGCTGTCACCACAAGTGCCTTTTAAAATCACCTTTCTTAATGATCAATTTATCTATAGCAGGGGAAAACACAAACCATAAAATTGATTAAAACATCTTCTCAGGCACCCTTATAACTTAAGTGCATGCATCGCCTAACCTCCACCTTAACTCCTCCATCACATACCAATATCAAACAGACACTGATAAATCCAAACTTCGACGACTGATTAAACTAATTAAAACTTAAAATATATGTGATATATGCTAACTACTGTCCTCATTAGGAATCATTATTATAAGATTAAGGCTCGGTTAATCCAAGTTGAAATAGGGTGTCTTTCCAGTTTCACTCTTTTTAAATAGGGTGTCTTATCACTTATGTATGGAGGGAAGATGTTTTCCTCAAGGACAATCATGTTTTCTGGCTTTCCATTTTCTTGAGAGTGGTAGCTTACATGCAGGTAAGAAAAGGACATTCTAAGATCAACCAGCAGGATATCGTCGATGTTTTGGACAAGCAATTGCT</genome_strand>
        <mrna_strand>GGCTGCACGAATCAATGAAATGTTTTCTGTTGCTAGGAGAAAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCAGCTTTTGTATTTATAGATGAGATTGATGCTATTGCTGGAAGGCATGCAAGAAAGGATCCACGCAGGAAGGCAACATTTGAGGCTCTGATTTCTCAGCTTGACGGGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGAAAAAACTGGTGTTGATAGGTTTTCACTAAGACAAGCTGTCATATTCATCTGTGCAACCAATCGGCCAGATGAACTGGACTTAGAATTTGTCCCGCCCTGGACGTATTGACAGACGTGTGTATATTGGTTTACCAGATGCAAAGCAACGAGTGCAAATTTTTGGAGTTCACAGTGCTGGGAAACAGCTTTCCGAGGATATTGCCTTTGAGAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGTCTTTCGTACAGTTGGATATTCTGGGGCAGACATAAGAAATCTAGTCAATGAAGCTGGAATAATGTCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGAAAAGGACATTCTAAGATCAACCAGCAGGATATCGTCGATGTTTTGGACAAGCAATTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U598547" ref_strand="+" ref_description="SGN-U598547 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|4835753|gb|AAD30220.1|AC007202_2 (e_value=3e-62) Is; (*ATH) AT1G79560.1 (e_value=3e-64) | Symbol: FTSH12 | encodes an FtsH protease that is localized to the chloroplast | chr1:29931687-29937899 FORWARD | Aliases: T8K14.2, T8K14_2, EMB1047, EMBRYO DEFECTIVE 1047, FTSH12; (*SWP) sp|Q9SAJ3|FTSHC_ARATH (e_value=2e-63) Cell division protease ftsH homolog 12, chloroplastic OS=Arabidopsis thaliana GN=FTSH12; ">
      <seq>gcagaacaattagattcagtaaatgcgaggtatgtggttgaatttgacatgaaggaagttgagaacagccttcgcaaagatgttgttgagaagacaagagaaactcaaggaaccagggcattgtggatctcgaaaagatggtggagatatcgcccgaaacttccctatacctattttcttcaaaaacttgatacttctgaggtggctgctatagtcttcacagaggatctgaagagagtgtttgtcacaatgaaagaaggattccctcttgaatatattgttgatattccactagatcctttcttatttgagatgatatcaagttctggagctgaagtagatctacttcagaagcggcagattcattactttttcaaagttctttttgctttattgcctggaatactgattttgtgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="-" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="130008" stop="128528"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="129708" g_stop="129508" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="201" r_length="201" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="129507" i_stop="129134" i_length="374">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="129133" g_stop="129056" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="202" r_stop="279" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="129055" i_stop="128966" i_length="90">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="128965" g_stop="128828" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="280" r_stop="417" r_length="138" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="-" ref_id="SGN-U598547" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>417</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U598547" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="129708" e_stop="129508"/>
          <exon e_start="129133" e_stop="129056"/>
          <exon e_start="128965" e_stop="128828"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAGAACAATTAGATTCAGTAAATGCGAGGTATGTGGTTGAATTTGACATGAAGGAAGTTGAGAACAGCCTTCGCAAAGATGTTGTTGAGAAGACAAGAGAAACTCAAGGAACCAGGGCATTGTGGATCTCGAAAAGATGGTGGAGATATCGCCCGAAACTTCCCTATACCTATTTTCTTCAAAAACTTGATACTTCTGAGGTAAATGTTTATCTTCTCACTTCTGTATCTCTTCATACTCAGATATGGTTGGTCCCTTCTGGTTCTAATGCTTCCAAGTGGAAATAAGTGTGGATGCTTTTAAATCTACAGTATTAATGAATACATGGTACATTTTAAGGATTGTACTTCAAGTTGTGGCATGGGTGACTTGATGCCACCCTATTCTTCATTCTTTTGAATGATGTTATAAGGGAAAATAGCAAAAGATAGATTTCTTAAAGAAAACAGTTTCCTTTTCTTGAACTCTAGCTGGAAACTAAAATTATCTTTTACATGTGGATCAAACTAATTTATTTTCTTTACTTGGATATGGACGCACTTCCAACTAGATTTACTGACTTAGTGTTCTGCAGGTGGCTGCTATAGTCTTCACAGAGGATCTGAAGAGAGTGTTTGTCACAATGAAAGAAGGATTCCCTCTTGAATATATTGTGCGTAAGACATATTAACCTTTCCAGAATAAAGTCATCACTGTTCCTGAACTCCTGACCTTTATACTGATTAATGTATTCTCTTCTCAGGTTGATATTCCACTAGATCCTTTCTTATTTGAGATGATATCAAGTTCTGGAGCTGAAGTAGATCTACTTCAGAAGCGGCAGATTCATTACTTTTTCAAAGTTCTTTTTGCTTTATTGCCTGGAATACTGATTTTGTGG</genome_strand>
        <mrna_strand>GCAGAACAATTAGATTCAGTAAATGCGAGGTATGTGGTTGAATTTGACATGAAGGAAGTTGAGAACAGCCTTCGCAAAGATGTTGTTGAGAAGACAAGAGAAACTCAAGGAACCAGGGCATTGTGGATCTCGAAAAGATGGTGGAGATATCGCCCGAAACTTCCCTATACCTATTTTCTTCAAAAACTTGATACTTCTGAG......................................................................................................................................................................................................................................................................................................................................................................................GTGGCTGCTATAGTCTTCACAGAGGATCTGAAGAGAGTGTTTGTCACAATGAAAGAAGGATTCCCTCTTGAATATATT..........................................................................................GTTGATATTCCACTAGATCCTTTCTTATTTGAGATGATATCAAGTTCTGGAGCTGAAGTAGATCTACTTCAGAAGCGGCAGATTCATTACTTTTTCAAAGTTCTTTTTGCTTTATTGCCTGGAATACTGATTTTGTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U573238" ref_strand="+" ref_description="SGN-U573238 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|157357899|emb|CAO64911.1| (e_value=4e-34) unnamed; (*ATH) AT1G79560.1 (e_value=7e-30) | Symbol: FTSH12 | encodes an FtsH protease that is localized to the chloroplast | chr1:29931687-29937899 FORWARD | Aliases: T8K14.2, T8K14_2, EMB1047, EMBRYO DEFECTIVE 1047, FTSH12; (*SWP) sp|Q9SAJ3|FTSHC_ARATH (e_value=6e-29) Cell division protease ftsH homolog 12, chloroplastic OS=Arabidopsis thaliana GN=FTSH12; ">
      <seq>gacgaccaagaccggcgacaattcagtttttccgacgagcaagagagccgaaaccgaagcattatcttcgtattctctaagcttctcaatgcatctaaccactactcctcctcctcaacagctgaattcaatacaattatcttcaaaaccccttttactcacattgccattcaaatgcagaaggaagttttcccgtataagaagacctaccattgtagcttcttcttccaatactaataacagtcctgaagggttttcttggctgcaactttcacagtccattcgccgtggttccgaacgtttcttgaatcaattggaagactctgtgaagcaagagacgggttttgattttaaggatgttaaagttaaagttggggaattttcaggtcgagctgttgattcagccaagaatggccaagttttgctgcaacgttttcagtctgagttgtttcctgagttcttgaattggaacaaattcgagtcctggaaggtgaattttcccatttcttatttgagttatttgtataactttgtgctcacattatcctttttccccttccccccaggacgtcaagaaatgggattccaaaagaagtggtgtattcattctctatattatagttacggtatgttcttgtcaaaaatatatatggcaattcgagctcctattattaatagggaaagaaaagaacttactgaggcatacatggaagcattgattcctgaacctactcctggtaatgtcaaaaggtaaacaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="-" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="132788" stop="131431"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="132488" g_stop="131739" g_length="750"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="750" r_length="750" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="-" ref_id="SGN-U573238" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>750</cumulative_length_of_scored_exons>
        <coverage percentage="0.988" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U573238" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="132488" e_stop="131739"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACGACCAAGACCGGCGACAATTCAGTTTTTCCGACGAGCAAGAGAGCCGAAACCGAAGCATTATCTTCGTATTCTCTAAGCTTCTCAATGCATCTAACCACTACTCCTCCTCCTCAACAGCTGAATTCAATACAATTATCTTCAAAACCCCTTTTACTCACATTGCCATTCAAATGCAGAAGGAAGTTTTCCCGTATAAGAAGACCTACCATTGTAGCTTCTTCTTCCAATACTAATAACAGTCCTGAAGGGTTTTCTTGGCTGCAACTTTCACAGTCCATTCGCCGTGGTTCCGAACGTTTCTTGAATCAATTGGAAGACTCTGTGAAGCAAGAGACGGGTTTTGATTTTAAGGATGTTAAAGTTAAAGTTGGGGAATTTTCAGGTCGAGCTGTTGATTCAGCCAAGAATGGCCAAGTTTTGCTGCAACGTTTTCAGTCTGAGTTGTTTCCTGAGTTCTTGAATTGGAACAAATTCGAGTCCTGGAAGGTGAATTTTCCCATTTCTTATTTGAGTTATTTGTATAACTTTGTGCTCACATTATCCTTTTTCCCCTT-CCCCCAGGACGTCAAGAAATGGGATTCCAAAAGAGTTGGTGTATTCATTCTCTATATTATAGTTACGGTATGTTCTTGTCAAAAAATATATATGGCAATTCGAGCTCCTATTATTAATAGGGAAAGAAAAGAACTTACTGAGGCATACATGGAAGCATTGATTCCTGAACCTACTCCTGTTAATGTCAAAAG</genome_strand>
        <mrna_strand>GACGACCAAGACCGGCGACAATTCAGTTTTTCCGACGAGCAAGAGAGCCGAAACCGAAGCATTATCTTCGTATTCTCTAAGCTTCTCAATGCATCTAACCACTACTCCTCCTCCTCAACAGCTGAATTCAATACAATTATCTTCAAAACCCCTTTTACTCACATTGCCATTCAAATGCAGAAGGAAGTTTTCCCGTATAAGAAGACCTACCATTGTAGCTTCTTCTTCCAATACTAATAACAGTCCTGAAGGGTTTTCTTGGCTGCAACTTTCACAGTCCATTCGCCGTGGTTCCGAACGTTTCTTGAATCAATTGGAAGACTCTGTGAAGCAAGAGACGGGTTTTGATTTTAAGGATGTTAAAGTTAAAGTTGGGGAATTTTCAGGTCGAGCTGTTGATTCAGCCAAGAATGGCCAAGTTTTGCTGCAACGTTTTCAGTCTGAGTTGTTTCCTGAGTTCTTGAATTGGAACAAATTCGAGTCCTGGAAGGTGAATTTTCCCATTTCTTATTTGAGTTATTTGTATAACTTTGTGCTCACATTATCCTTTTTCCCCTTCCCCCCAGGACGTCAAGAAATGGGATTCCAAAAGAAGTGGTGTATTCATTCTCTATATTATAGTTACGGTATGTTCTTGTC-AAAAATATATATGGCAATTCGAGCTCCTATTATTAATAGGGAAAGAAAAGAACTTACTGAGGCATACATGGAAGCATTGATTCCTGAACCTACTCCTGGTAATGTCAAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>23</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="19336" PGL_stop="16809"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="19336" e_stop="19073"/>
            <exon e_start="18970" e_stop="18908"/>
            <exon e_start="18420" e_stop="18365"/>
            <exon e_start="18184" e_stop="18104"/>
            <exon e_start="18022" e_stop="17949"/>
            <exon e_start="17795" e_stop="17713"/>
            <exon e_start="17245" e_stop="17139"/>
            <exon e_start="16865" e_stop="16809"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.971" e_score="1.000"/>
          <exon-intron don_prob="0.672" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.911" acc_prob="0.686" e_score="1.000"/>
          <exon-intron don_prob="0.985" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.634" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.447" e_score="1.000"/>
          <exon-only e_score="0.947"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="19336" e_stop="19073" e_length="264"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.971">
            <gDNA_intron_boundary i_start="19072" i_stop="18971" i_length="102"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="18970" e_stop="18908" e_length="63"/>
          </exon>
          <intron i_serial="2" don_prob="0.672" acc_prob="0.994">
            <gDNA_intron_boundary i_start="18907" i_stop="18421" i_length="487"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="18420" e_stop="18365" e_length="56"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="18364" i_stop="18185" i_length="180"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="18184" e_stop="18104" e_length="81"/>
          </exon>
          <intron i_serial="4" don_prob="0.911" acc_prob="0.686">
            <gDNA_intron_boundary i_start="18103" i_stop="18023" i_length="81"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="18022" e_stop="17949" e_length="74"/>
          </exon>
          <intron i_serial="5" don_prob="0.985" acc_prob="0.996">
            <gDNA_intron_boundary i_start="17948" i_stop="17796" i_length="153"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="17795" e_stop="17713" e_length="83"/>
          </exon>
          <intron i_serial="6" don_prob="0.998" acc_prob="0.634">
            <gDNA_intron_boundary i_start="17712" i_stop="17246" i_length="467"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="17245" e_stop="17139" e_length="107"/>
          </exon>
          <intron i_serial="7" don_prob="1.000" acc_prob="0.447">
            <gDNA_intron_boundary i_start="17138" i_stop="16866" i_length="273"/>
          </intron>
          <exon e_serial="8" e_score="0.947">
            <gDNA_exon_boundary e_start="16865" e_stop="16809" e_length="57"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19336" stop="19073"/>
              <exon start="18970" stop="18908"/>
              <exon start="18420" stop="18365"/>
              <exon start="18184" stop="18104"/>
              <exon start="18022" stop="17949"/>
              <exon start="17795" stop="17713"/>
              <exon start="17245" stop="17139"/>
              <exon start="16865" stop="16809"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U565169" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AACACTTGTTTTTGGCGCTAACACCGTTCACAGTGAATCCATGGGGGAAGAAGCTTCAGAGCAGCAGCTTGTTATAGAATCCATGGATGAAGATGCTGTAGAGCTACCGGAAACCCCTATTGAAGCTGTAGAAGAGAAACCATCGGAAGAACCTTACCCTTGGCCGGTTATTCAGTATGATGTTCCGCCGTATCTAACCTATCATTTCTTCAATCAGTTCAGGACGCCTTCAAACCCTAATAATTTCTTAAAGGGTGTCAAATG : GTCTCCTGATGGTTCTGGTTTCCTCACTTGCTCTGATGATAATACCTTTTGTTTATATAACTT : GCCATATGATGAAAGTGGACAGCTTGCTGATTTTTCCTCATCAGCTGCTGATACAG : ATTCGTATGCTGCAAGTCTTGTCATGAGTGACGGGGAGTCTGTATATGACTATTGCTGGTATCCCTATATGTCTTCTTCAA : GTCCAGAGACATGTGTTTTTGCAAGTACTACCCGTGATCACCCTATTCATCTCTGGGATGCTACTACTGGACAG : TTACGTTGTACATACCGTGCTTATGATGCCATGGACGAGATCACTGCTGCCTTTTCAATTGCCTTCAATCCCGCAGGGACTAA : GATATTTGCTGGTTACAACAAATCCATAAGAATATTTGATATTCATCGGCCTGGCAGAGATTTTACCCAGCACTCCACCCTTCAAGGAAATAAAGAAGGGCAATCAG : GAATTATATCCTCAATGGCTTTCTGTCCAAGCCATTCAGGGTTATTGGCAACTGGCT</gDNA_template>
            <first_frame> N  T  C  F  W  R  *  H  R  S  Q  *  I  H  G  G  R  S  F  R  A  A  A  C  Y  R  I  H  G  *  R  C  C  R  A  T  G  N  P  Y  *  S  C  R  R  E  T  I  G  R  T  L  P  L  A  G  Y  S  V  *  C  S  A  V  S  N  L  S  F  L  Q  S  V  Q  D  A  F  K  P  *  *  F  L  K  G  C  Q  M  :  V  S  *  W  F  W  F  P  H  L  L  *  *  *  Y  L  L  F  I  *  L  :  A  I  *  *  K  W  T  A  C  *  F  F  L  I  S  C  *  Y  R :   F  V  C  C  K  S  C  H  E  *  R  G  V  C  I  *  L  L  L  V  S  L  Y  V  F  F  K :   S  R  D  M  C  F  C  K  Y  Y  P  *  S  P  Y  S  S  L  G  C  Y  Y  W  T   : V  T  L  Y  I  P  C  L  *  C  H  G  R  D  H  C  C  L  F  N  C  L  Q  S  R  R  D  *  :  D  I  C  W  L  Q  Q  I  H  K  N  I  *  Y  S  S  A  W  Q  R  F  Y  P  A  L  H  P  S  R  K  *  R  R  A  I  R :   N  Y  I  L  N  G  F  L  S  K  P  F  R  V  I  G  N  W   </first_frame>
            <second_frame>  T  L  V  F  G  A  N  T  V  H  S  E  S  M  G  E  E  A  S  E  Q  Q  L  V  I  E  S  M  D  E  D  A  V  E  L  P  E  T  P  I  E  A  V  E  E  K  P  S  E  E  P  Y  P  W  P  V  I  Q  Y  D  V  P  P  Y  L  T  Y  H  F  F  N  Q  F  R  T  P  S  N  P  N  N  F  L  K  G  V  K  W :   S  P  D  G  S  G  F  L  T  C  S  D  D  N  T  F  C  L  Y  N  L :   P  Y  D  E  S  G  Q  L  A  D  F  S  S  S  A  A  D  T   : D  S  Y  A  A  S  L  V  M  S  D  G  E  S  V  Y  D  Y  C  W  Y  P  Y  M  S  S  S   : S  P  E  T  C  V  F  A  S  T  T  R  D  H  P  I  H  L  W  D  A  T  T  G  Q  :  L  R  C  T  Y  R  A  Y  D  A  M  D  E  I  T  A  A  F  S  I  A  F  N  P  A  G  T  K :   I  F  A  G  Y  N  K  S  I  R  I  F  D  I  H  R  P  G  R  D  F  T  Q  H  S  T  L  Q  G  N  K  E  G  Q  S   : G  I  I  S  S  M  A  F  C  P  S  H  S  G  L  L  A  T  G  </second_frame>
            <third_frame>   H  L  F  L  A  L  T  P  F  T  V  N  P  W  G  K  K  L  Q  S  S  S  L  L  *  N  P  W  M  K  M  L  *  S  Y  R  K  P  L  L  K  L  *  K  R  N  H  R  K  N  L  T  L  G  R  L  F  S  M  M  F  R  R  I  *  P  I  I  S  S  I  S  S  G  R  L  Q  T  L  I  I  S  *  R  V  S  N   : G  L  L  M  V  L  V  S  S  L  A  L  M  I  I  P  F  V  Y  I  T   : C  H  M  M  K  V  D  S  L  L  I  F  P  H  Q  L  L  I  Q  :  I  R  M  L  Q  V  L  S  *  V  T  G  S  L  Y  M  T  I  A  G  I  P  I  C  L  L  Q  :  V  Q  R  H  V  F  L  Q  V  L  P  V  I  T  L  F  I  S  G  M  L  L  L  D  S :   Y  V  V  H  T  V  L  M  M  P  W  T  R  S  L  L  P  F  Q  L  P  S  I  P  Q  G  L   : R  Y  L  L  V  T  T  N  P  *  E  Y  L  I  F  I  G  L  A  E  I  L  P  S  T  P  P  F  K  E  I  K  K  G  N  Q  :  E  L  Y  P  Q  W  L  S  V  Q  A  I  Q  G  Y  W  Q  L  A </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0329G05.3" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="19335" stop="19073"/>
                    <exon start="18970" stop="18908"/>
                    <exon start="18420" stop="18365"/>
                    <exon start="18184" stop="18104"/>
                    <exon start="18022" stop="17949"/>
                    <exon start="17795" stop="17713"/>
                    <exon start="17245" stop="17139"/>
                    <exon start="16865" stop="16810"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>783</number_coding_nucleotides>
                  <number_encoded_amino_acids>261</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TLVFGANTVHSESMGEEASEQQLVIESMDEDAVELPETPIEAVEEKPSEEPYPWPVIQYDVPPYLTYHFFNQFRTPSNPNNFLKGVKWSPDGSGFLTCSDDNTFCLYNLPYDESGQLADFSSSAADTDSYAASLVMSDGESVYDYCWYPYMSSSSPETCVFASTTRDHPIHLWDATTGQLRCTYRAYDAMDEITAAFSIAFNPAGTKIFAGYNKSIRIFDIHRPGRDFTQHSTLQGNKEGQSGIISSMAFCPSHSGLLATG</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="24731" PGL_stop="19731"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="24731" e_stop="24647"/>
            <exon e_start="24008" e_stop="23920"/>
            <exon e_start="23322" e_stop="23136"/>
            <exon e_start="22223" e_stop="22093"/>
            <exon e_start="21965" e_stop="21896"/>
            <exon e_start="21804" e_stop="21739"/>
            <exon e_start="21190" e_stop="21036"/>
            <exon e_start="20950" e_stop="20855"/>
            <exon e_start="20576" e_stop="20425"/>
            <exon e_start="20347" e_stop="20264"/>
            <exon e_start="20188" e_stop="19731"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.976" e_score="0.976"/>
          <exon-intron don_prob="0.999" acc_prob="0.967" e_score="1.000"/>
          <exon-intron don_prob="0.764" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.602" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.968" acc_prob="0.686" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.903" acc_prob="0.905" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.935" e_score="1.000"/>
          <exon-intron don_prob="0.877" acc_prob="0.958" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.976">
            <gDNA_exon_boundary e_start="24731" e_stop="24647" e_length="85"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.976">
            <gDNA_intron_boundary i_start="24646" i_stop="24009" i_length="638"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="24008" e_stop="23920" e_length="89"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.967">
            <gDNA_intron_boundary i_start="23919" i_stop="23323" i_length="597"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="23322" e_stop="23136" e_length="187"/>
          </exon>
          <intron i_serial="3" don_prob="0.764" acc_prob="0.996">
            <gDNA_intron_boundary i_start="23135" i_stop="22224" i_length="912"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="22223" e_stop="22093" e_length="131"/>
          </exon>
          <intron i_serial="4" don_prob="0.602" acc_prob="0.991">
            <gDNA_intron_boundary i_start="22092" i_stop="21966" i_length="127"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="21965" e_stop="21896" e_length="70"/>
          </exon>
          <intron i_serial="5" don_prob="0.968" acc_prob="0.686">
            <gDNA_intron_boundary i_start="21895" i_stop="21805" i_length="91"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="21804" e_stop="21739" e_length="66"/>
          </exon>
          <intron i_serial="6" don_prob="0.991" acc_prob="0.000">
            <gDNA_intron_boundary i_start="21738" i_stop="21191" i_length="548"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="21190" e_stop="21036" e_length="155"/>
          </exon>
          <intron i_serial="7" don_prob="0.903" acc_prob="0.905">
            <gDNA_intron_boundary i_start="21035" i_stop="20951" i_length="85"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="20950" e_stop="20855" e_length="96"/>
          </exon>
          <intron i_serial="8" don_prob="0.999" acc_prob="0.935">
            <gDNA_intron_boundary i_start="20854" i_stop="20577" i_length="278"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="20576" e_stop="20425" e_length="152"/>
          </exon>
          <intron i_serial="9" don_prob="0.877" acc_prob="0.958">
            <gDNA_intron_boundary i_start="20424" i_stop="20348" i_length="77"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="20347" e_stop="20264" e_length="84"/>
          </exon>
          <intron i_serial="10" don_prob="0.987" acc_prob="0.999">
            <gDNA_intron_boundary i_start="20263" i_stop="20189" i_length="75"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="20188" e_stop="19731" e_length="458"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24731" stop="24647"/>
              <exon start="24008" stop="23920"/>
              <exon start="23322" stop="23136"/>
              <exon start="22223" stop="22093"/>
              <exon start="21965" stop="21896"/>
              <exon start="21804" stop="21739"/>
              <exon start="21190" stop="21036"/>
              <exon start="20950" stop="20855"/>
              <exon start="20576" stop="20425"/>
              <exon start="20347" stop="20264"/>
              <exon start="20188" stop="19731"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U572850" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCAGTCCCCATTTCCCCATAACAACCAAGAAAAAGTTGAAGTGCTTCATCTTCTCAGTTCAATAATCAATTGGTGAAGTTGGATT : ATAATTGCTCTCCATGTCTGTTGAACGAACTTTCAAGAAGCTAGTTTCTGGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAG : ATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCA : GTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAG : GATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAGCCGTCTCCGGAAAT : ATTTCTTGAAGCAGCTAAAAGACTCAACATGGATCCATCCAGCTTTCTTGTCATTGAAGATTCAAT : ACCAGGTGTTACTGCTGGTAAAGATGCTGGAATGGCAGTAGTTGCTGTACCATCTCTTGCAAAGCAGTCTCATCTTTATACCTCTGCTGATGAAGTGATCAATTCTCTTCTAGATTTGCAACTAGAAAAGTGGGGACTACCTGCATTTCAAGATA : GGATAGAAGGTACTTTGCCTTTAGAACCTTGGTATATAGGTGGTCCTGTCATTAAGGGATTTGGGCGCGGCTCAAAGGTTCTCGGGATCCCCACAG : CTAATTTATCCCCACAAGGTTATTCAGCCATTCTTTCAGAACATCCAGCGGGTGTATATTTTGGATGGGCAGGACTATCAGGTCGAGGTGTCTACAAGATGGTCATGAGCATTGGTTGGAATCCTTTCTTCAACAATACAGAGAAGACGGTT : GAACCATGGTTGCTTCATGACTTCAATGAGGACTTCTATGGTGAGGAATTGCATCTAGTTGTTGTGGGCTACATACGGCCGGAG : GCCAACTTTTCGTCACTTGAAGCCTTGATAGCAAAAATTCACGAGGACAGGAAGATTGCAGAAAGAGCTCTCGAACTTCCTCAATACTTGAAGTACAAGGACGATCCATACCTTAAAAGTTCTCTGCATCAACAAAATTGATCATTGAAGTGTTGAAGTTCATTATTGTTCTGATTGGGATTGTATCTGTTTATTCTGTCCTAATTCCTCAGACTACAATAGTCTCCCCATCAAAATGCTCTATACAATAAAAAGATAAAAAGAATTTGAATGTATAGCTATTCAGAAGTTAAAGAACCTTCCAGGGGGTATTAGTGAATGGCAAAGGGTTCAAGTGCAGGATCTTTGTACTGAGAATTTCAAGTTCCTGTGTAAATGTTGATTAATGTAACTTGTTTTCTATCTGTTTATAATATGGAAACATGCAAGCTGATGCAGATTGTAAATTGCTTCCTTTT</gDNA_template>
            <first_frame> S  V  P  I  S  P  *  Q  P  R  K  S  *  S  A  S  S  S  Q  F  N  N  Q  L  V  K  L  D   : Y  N  C  S  P  C  L  L  N  E  L  S  R  S  *  F  L  V  S  S  L  I  W  M  V  H  F  L  I  Q  :  M  A  L  *  V  R  F  *  R  F  S  *  L  S  M  E  S  N  G  M  G  E  K  L  P  T  *  *  G  K  P  Q  Q  K  L  L  L  P  L  L  K  I  M  G  C  H  C  Q  E  M  N  F  F  R  N  F  T  Q  C  C  L  I   : S  G  A  I  S  K  L  F  Q  G  P  I  D  *  L  T  I  *  A  V  M  V  Y  P  W  H  W  R  Q  I  L  L  N  L  T  L  R  P  K  F  F  I  M  Q  :  D  G  K  S  P  S  Q  L  L  L  E  E  M  K  *  K  L  E  S  R  L  R  K   : Y  F  L  K  Q  L  K  D  S  T  W  I  H  P  A  F  L  S  L  K  I  Q   : Y  Q  V  L  L  L  V  K  M  L  E  W  Q  *  L  L  Y  H  L  L  Q  S  S  L  I  F  I  P  L  L  M  K  *  S  I  L  F  *  I  C  N  *  K  S  G  D  Y  L  H  F  K  I  :  G  *  K  V  L  C  L  *  N  L  G  I  *  V  V  L  S  L  R  D  L  G  A  A  Q  R  F  S  G  S  P  Q  :  L  I  Y  P  H  K  V  I  Q  P  F  F  Q  N  I  Q  R  V  Y  I  L  D  G  Q  D  Y  Q  V  E  V  S  T  R  W  S  *  A  L  V  G  I  L  S  S  T  I  Q  R  R  R  L :   N  H  G  C  F  M  T  S  M  R  T  S  M  V  R  N  C  I  *  L  L  W  A  T  Y  G  R  R :   P  T  F  R  H  L  K  P  *  *  Q  K  F  T  R  T  G  R  L  Q  K  E  L  S  N  F  L  N  T  *  S  T  R  T  I  H  T  L  K  V  L  C  I  N  K  I  D  H  *  S  V  E  V  H  Y  C  S  D  W  D  C  I  C  L  F  C  P  N  S  S  D  Y  N  S  L  P  I  K  M  L  Y  T  I  K  R  *  K  E  F  E  C  I  A  I  Q  K  L  K  N  L  P  G  G  I  S  E  W  Q  R  V  Q  V  Q  D  L  C  T  E  N  F  K  F  L  C  K  C  *  L  M  *  L  V  F  Y  L  F  I  I  W  K  H  A  S  *  C  R  L  *  I  A  S  F  </first_frame>
            <second_frame>  Q  S  P  F  P  H  N  N  Q  E  K  V  E  V  L  H  L  L  S  S  I  I  N  W  *  S  W  I  :  I  I  A  L  H  V  C  *  T  N  F  Q  E  A  S  F  W  C  H  P  *  F  G  W  Y  T  S  *  Y  R :   W  H  C  E  *  D  F  K  G  F  L  S  *  V  W  K  A  M  G  W  E  R  S  S  P  H  S  R  E  N  P  N  R  S  C  C  C  R  C  *  R  L  W  A  A  T  V  K  R  *  I  S  F  A  I  L  P  N  A  V  *  S  :  V  A  Q  Y  Q  S  S  S  R  G  Q  S  I  D  *  P  F  E  R  S  W  C  T  H  G  I  G  V  K  F  F  *  I  *  H  *  G  Q  N  F  S  S  C  R :   M  E  R  V  L  L  S  Y  C  W  R  R  *  S  E  S  W  K  A  V  S  G  N  :  I  S  *  S  S  *  K  T  Q  H  G  S  I  Q  L  S  C  H  *  R  F  N  :  T  R  C  Y  C  W  *  R  C  W  N  G  S  S  C  C  T  I  S  C  K  A  V  S  S  L  Y  L  C  *  *  S  D  Q  F  S  S  R  F  A  T  R  K  V  G  T  T  C  I  S  R  * :   D  R  R  Y  F  A  F  R  T  L  V  Y  R  W  S  C  H  *  G  I  W  A  R  L  K  G  S  R  D  P  H  S :   *  F  I  P  T  R  L  F  S  H  S  F  R  T  S  S  G  C  I  F  W  M  G  R  T  I  R  S  R  C  L  Q  D  G  H  E  H  W  L  E  S  F  L  Q  Q  Y  R  E  D  G   : *  T  M  V  A  S  *  L  Q  *  G  L  L  W  *  G  I  A  S  S  C  C  G  L  H  T  A  G   : G  Q  L  F  V  T  *  S  L  D  S  K  N  S  R  G  Q  E  D  C  R  K  S  S  R  T  S  S  I  L  E  V  Q  G  R  S  I  P  *  K  F  S  A  S  T  K  L  I  I  E  V  L  K  F  I  I  V  L  I  G  I  V  S  V  Y  S  V  L  I  P  Q  T  T  I  V  S  P  S  K  C  S  I  Q  *  K  D  K  K  N  L  N  V  *  L  F  R  S  *  R  T  F  Q  G  V  L  V  N  G  K  G  F  K  C  R  I  F  V  L  R  I  S  S  S  C  V  N  V  D  *  C  N  L  F  S  I  C  L  *  Y  G  N  M  Q  A  D  A  D  C  K  L  L  P  F </second_frame>
            <third_frame>   S  P  H  F  P  I  T  T  K  K  K  L  K  C  F  I  F  S  V  Q  *  S  I  G  E  V  G  L :   *  L  L  S  M  S  V  E  R  T  F  K  K  L  V  S  G  V  I  L  D  L  D  G  T  L  L  N  T   : D  G  I  V  S  E  I  L  K  V  F  L  V  K  Y  G  K  Q  W  D  G  R  E  A  P  H  I  V  G  K  T  P  T  E  A  A  A  A  V  V  E  D  Y  G  L  P  L  S  R  D  E  F  L  S  Q  F  Y  P  M  L  S  D  Q :   W  R  N  I  K  A  L  P  G  A  N  R  L  I  N  H  L  S  G  H  G  V  P  M  A  L  A  S  N  S  S  K  S  N  I  E  A  K  I  F  H  H  A   : G  W  K  E  S  F  S  A  I  V  G  G  D  E  V  K  A  G  K  P  S  P  E  I :   F  L  E  A  A  K  R  L  N  M  D  P  S  S  F  L  V  I  E  D  S  I :   P  G  V  T  A  G  K  D  A  G  M  A  V  V  A  V  P  S  L  A  K  Q  S  H  L  Y  T  S  A  D  E  V  I  N  S  L  L  D  L  Q  L  E  K  W  G  L  P  A  F  Q  D   : R  I  E  G  T  L  P  L  E  P  W  Y  I  G  G  P  V  I  K  G  F  G  R  G  S  K  V  L  G  I  P  T   : A  N  L  S  P  Q  G  Y  S  A  I  L  S  E  H  P  A  G  V  Y  F  G  W  A  G  L  S  G  R  G  V  Y  K  M  V  M  S  I  G  W  N  P  F  F  N  N  T  E  K  T  V  :  E  P  W  L  L  H  D  F  N  E  D  F  Y  G  E  E  L  H  L  V  V  V  G  Y  I  R  P  E  :  A  N  F  S  S  L  E  A  L  I  A  K  I  H  E  D  R  K  I  A  E  R  A  L  E  L  P  Q  Y  L  K  Y  K  D  D  P  Y  L  K  S  S  L  H  Q  Q  N  *  S  L  K  C  *  S  S  L  L  F  *  L  G  L  Y  L  F  I  L  S  *  F  L  R  L  Q  *  S  P  H  Q  N  A  L  Y  N  K  K  I  K  R  I  *  M  Y  S  Y  S  E  V  K  E  P  S  R  G  Y  *  *  M  A  K  G  S  S  A  G  S  L  Y  *  E  F  Q  V  P  V  *  M  L  I  N  V  T  C  F  L  S  V  Y  N  M  E  T  C  K  L  M  Q  I  V  N  C  F  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0329G05.3" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="24004" stop="23920"/>
                    <exon start="23322" stop="23136"/>
                    <exon start="22223" stop="22093"/>
                    <exon start="21965" stop="21896"/>
                    <exon start="21804" stop="21739"/>
                    <exon start="21190" stop="21036"/>
                    <exon start="20950" stop="20855"/>
                    <exon start="20576" stop="20425"/>
                    <exon start="20347" stop="20264"/>
                    <exon start="20188" stop="20048"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1164</number_coding_nucleotides>
                  <number_encoded_amino_acids>388</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLSMSVERTFKKLVSGVILDLDGTLLNTDGIVSEILKVFLVKYGKQWDGREAPHIVGKTPTEAAAAVVEDYGLPLSRDEFLSQFYPMLSDQWRNIKALPGANRLINHLSGHGVPMALASNSSKSNIEAKIFHHAGWKESFSAIVGGDEVKAGKPSPEIFLEAAKRLNMDPSSFLVIEDSIPGVTAGKDAGMAVVAVPSLAKQSHLYTSADEVINSLLDLQLEKWGLPAFQDRIEGTLPLEPWYIGGPVIKGFGRGSKVLGIPTANLSPQGYSAILSEHPAGVYFGWAGLSGRGVYKMVMSIGWNPFFNNTEKTVEPWLLHDFNEDFYGEELHLVVVGYIRPEANFSSLEALIAKIHEDRKIAERALELPQYLKYKDDPYLKSSLHQQN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="20869" e_stop="20274"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="20869" e_stop="20274" e_length="596"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20869" stop="20274"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U572849" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCGGGATCCCCACAGGTATGCGGTCTTCTTTATTCCTTCTGCTGAATGGCTAAAATAAATGCTTGACTCGTTATCTGTGTATACTTGAAATGACTTGAGAATTTCTCAGAAGTTTGTTATTGGAATTTCAGTTTCTTGTGAGCCTGTCATATCAGAGATATTGATTTTTATGTCAAATTATTATCTGGATTCGAACTCCAATTGTTGGAGGGGCATGGAAGATTAGTATCTTGCCTCGTATGACTTAACAGTGATGTGTTTTTCTATTCTTATGGGGTCAATATTCTTTTCAGCTAATTTATCCCCACAAGGTTATTCAGCCATTCTTTCAGAACATCCAGCGGGTGTATATTTTGGATGGGCAGGACTATCAGGTCGAGGTGTCTACAAGATGGTCATGAGCATTGGTTGGAATCCTTTCTTCAACAATACAGAGAAGACGGTTGTAAGTGTGTCGTGACATATGTTTCTTCTGTATTCTTGACTTCTTTGGTGTTTGTTGAAAGACAACTTTACTTTTAGGAACCATGGTTGCTTCATGACTTCAATGAGGACTTCTATGGTGAGGAATTGCATCTAGTTGTTGTGGGCTACAT</gDNA_template>
            <first_frame> S  G  S  P  Q  V  C  G  L  L  Y  S  F  C  *  M  A  K  I  N  A  *  L  V  I  C  V  Y  L  K  *  L  E  N  F  S  E  V  C  Y  W  N  F  S  F  L  *  A  C  H  I  R  D  I  D  F  Y  V  K  L  L  S  G  F  E  L  Q  L  L  E  G  H  G  R  L  V  S  C  L  V  *  L  N  S  D  V  F  F  Y  S  Y  G  V  N  I  L  F  S  *  F  I  P  T  R  L  F  S  H  S  F  R  T  S  S  G  C  I  F  W  M  G  R  T  I  R  S  R  C  L  Q  D  G  H  E  H  W  L  E  S  F  L  Q  Q  Y  R  E  D  G  C  K  C  V  V  T  Y  V  S  S  V  F  L  T  S  L  V  F  V  E  R  Q  L  Y  F  *  E  P  W  L  L  H  D  F  N  E  D  F  Y  G  E  E  L  H  L  V  V  V  G  Y   </first_frame>
            <second_frame>  R  D  P  H  R  Y  A  V  F  F  I  P  S  A  E  W  L  K  *  M  L  D  S  L  S  V  Y  T  *  N  D  L  R  I  S  Q  K  F  V  I  G  I  S  V  S  C  E  P  V  I  S  E  I  L  I  F  M  S  N  Y  Y  L  D  S  N  S  N  C  W  R  G  M  E  D  *  Y  L  A  S  Y  D  L  T  V  M  C  F  S  I  L  M  G  S  I  F  F  S  A  N  L  S  P  Q  G  Y  S  A  I  L  S  E  H  P  A  G  V  Y  F  G  W  A  G  L  S  G  R  G  V  Y  K  M  V  M  S  I  G  W  N  P  F  F  N  N  T  E  K  T  V  V  S  V  S  *  H  M  F  L  L  Y  S  *  L  L  W  C  L  L  K  D  N  F  T  F  R  N  H  G  C  F  M  T  S  M  R  T  S  M  V  R  N  C  I  *  L  L  W  A  T  </second_frame>
            <third_frame>   G  I  P  T  G  M  R  S  S  L  F  L  L  L  N  G  *  N  K  C  L  T  R  Y  L  C  I  L  E  M  T  *  E  F  L  R  S  L  L  L  E  F  Q  F  L  V  S  L  S  Y  Q  R  Y  *  F  L  C  Q  I  I  I  W  I  R  T  P  I  V  G  G  A  W  K  I  S  I  L  P  R  M  T  *  Q  *  C  V  F  L  F  L  W  G  Q  Y  S  F  Q  L  I  Y  P  H  K  V  I  Q  P  F  F  Q  N  I  Q  R  V  Y  I  L  D  G  Q  D  Y  Q  V  E  V  S  T  R  W  S  *  A  L  V  G  I  L  S  S  T  I  Q  R  R  R  L  *  V  C  R  D  I  C  F  F  C  I  L  D  F  F  G  V  C  *  K  T  T  L  L  L  G  T  M  V  A  S  *  L  Q  *  G  L  L  W  *  G  I  A  S  S  C  C  G  L  H </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0329G05.3" strand="-"/>
                <serials PGL_serial="2" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="20643" stop="20410"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>231</number_coding_nucleotides>
                  <number_encoded_amino_acids>77</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YLASYDLTVMCFSILMGSIFFSANLSPQGYSAILSEHPAGVYFGWAGLSGRGVYKMVMSIGWNPFFNNTEKTVVSVS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0329G05.3" strand="-"/>
                <serials PGL_serial="2" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="20572" stop="20348"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>222</number_coding_nucleotides>
                  <number_encoded_amino_acids>74</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FIPTRLFSHSFRTSSGCIFWMGRTIRSRCLQDGHEHWLESFLQQYREDGCKCVVTYVSSVFLTSLVFVERQLYF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="22225" e_stop="22093"/>
            <exon e_start="21965" e_stop="21925"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.602" acc_prob="0.991" e_score="0.902"/>
          <exon-only e_score="0.951"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.902">
            <gDNA_exon_boundary e_start="22225" e_stop="22093" e_length="133"/>
          </exon>
          <intron i_serial="1" don_prob="0.602" acc_prob="0.991">
            <gDNA_intron_boundary i_start="22092" i_stop="21966" i_length="127"/>
          </intron>
          <exon e_serial="2" e_score="0.951">
            <gDNA_exon_boundary e_start="21965" e_stop="21925" e_length="41"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22225" stop="22093"/>
              <exon start="21965" stop="21925"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U587889" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGGTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAG : GATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAA</gDNA_template>
            <first_frame> R  W  R  N  I  K  A  L  P  G  A  N  R  L  I  N  H  L  S  G  H  G  V  P  M  A  L  A  S  N  S  S  K  S  N  I  E  A  K  I  F  H  H  A   : G  W  K  E  S  F  S  A  I  V  G  G  D  E </first_frame>
            <second_frame>  G  G  A  I  S  K  L  F  Q  G  P  I  D  *  L  T  I  *  A  V  M  V  Y  P  W  H  W  R  Q  I  L  L  N  L  T  L  R  P  K  F  F  I  M  Q  :  D  G  K  S  P  S  Q  L  L  L  E  E  M   </second_frame>
            <third_frame>   V  A  Q  Y  Q  S  S  S  R  G  Q  S  I  D  *  P  F  E  R  S  W  C  T  H  G  I  G  V  K  F  F  *  I  *  H  *  G  Q  N  F  S  S  C  R :   M  E  R  V  L  L  S  Y  C  W  R  R  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0329G05.3"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="24709" e_stop="24647"/>
            <exon e_start="24008" e_stop="23920"/>
            <exon e_start="23322" e_stop="23136"/>
            <exon e_start="22223" e_stop="21896"/>
            <exon e_start="21804" e_stop="21739"/>
            <exon e_start="21077" e_stop="21036"/>
            <exon e_start="20950" e_stop="20855"/>
            <exon e_start="20576" e_stop="20425"/>
            <exon e_start="20347" e_stop="20264"/>
            <exon e_start="20188" e_stop="19762"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.976" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.967" e_score="1.000"/>
          <exon-intron don_prob="0.764" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.968" acc_prob="0.686" e_score="0.997"/>
          <exon-intron don_prob="0.991" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.903" acc_prob="0.905" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.935" e_score="1.000"/>
          <exon-intron don_prob="0.877" acc_prob="0.958" e_score="0.974"/>
          <exon-intron don_prob="0.987" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.859"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="24709" e_stop="24647" e_length="63"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.976">
            <gDNA_intron_boundary i_start="24646" i_stop="24009" i_length="638"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="24008" e_stop="23920" e_length="89"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.967">
            <gDNA_intron_boundary i_start="23919" i_stop="23323" i_length="597"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="23322" e_stop="23136" e_length="187"/>
          </exon>
          <intron i_serial="3" don_prob="0.764" acc_prob="0.996">
            <gDNA_intron_boundary i_start="23135" i_stop="22224" i_length="912"/>
          </intron>
          <exon e_serial="4" e_score="0.997">
            <gDNA_exon_boundary e_start="22223" e_stop="21896" e_length="328"/>
          </exon>
          <intron i_serial="4" don_prob="0.968" acc_prob="0.686">
            <gDNA_intron_boundary i_start="21895" i_stop="21805" i_length="91"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="21804" e_stop="21739" e_length="66"/>
          </exon>
          <intron i_serial="5" don_prob="0.991" acc_prob="0.000">
            <gDNA_intron_boundary i_start="21738" i_stop="21078" i_length="661"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="21077" e_stop="21036" e_length="42"/>
          </exon>
          <intron i_serial="6" don_prob="0.903" acc_prob="0.905">
            <gDNA_intron_boundary i_start="21035" i_stop="20951" i_length="85"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="20950" e_stop="20855" e_length="96"/>
          </exon>
          <intron i_serial="7" don_prob="0.999" acc_prob="0.935">
            <gDNA_intron_boundary i_start="20854" i_stop="20577" i_length="278"/>
          </intron>
          <exon e_serial="8" e_score="0.974">
            <gDNA_exon_boundary e_start="20576" e_stop="20425" e_length="152"/>
          </exon>
          <intron i_serial="8" don_prob="0.877" acc_prob="0.958">
            <gDNA_intron_boundary i_start="20424" i_stop="20348" i_length="77"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="20347" e_stop="20264" e_length="84"/>
          </exon>
          <intron i_serial="9" don_prob="0.987" acc_prob="0.999">
            <gDNA_intron_boundary i_start="20263" i_stop="20189" i_length="75"/>
          </intron>
          <exon e_serial="10" e_score="0.859">
            <gDNA_exon_boundary e_start="20188" e_stop="19762" e_length="427"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24709" stop="24647"/>
              <exon start="24008" stop="23920"/>
              <exon start="23322" stop="23136"/>
              <exon start="22223" stop="21896"/>
              <exon start="21804" stop="21739"/>
              <exon start="21077" stop="21036"/>
              <exon start="20950" stop="20855"/>
              <exon start="20576" stop="20425"/>
              <exon start="20347" stop="20264"/>
              <exon start="20188" stop="19762"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U572848" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="4" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AACCAAGAAAAAGTTGAAGTGCTTCATCTTCTCAGTTCAATAATCAATTGGTGAAGTTGGATT : ATAATTGCTCTCCATGTCTGTTGAACGAACTTTCAAGAAGCTAGTTTCTGGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAG : ATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCA : GTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAGGTAGAGTTCTAACATGTATTGCTAGAGAGGTATTTCTTTCCTTAGGAAGGTATTTTGTGCCAGTCCAGCATGTAAGATGGCATTTATGCTTGGTGCTTTGATTGGGATAGTCTTTATTTTTTTTCAGGATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAGCCGTCTCCGGAAAT : ATTTCTTGAAGCAGCTAAAAGACTCAACATGGATCCATCCAGCTTTCTTGTCATTGAAGATTCAAT : ATTTGCAACTAGAAAAGTGGGGACTACCTGCATTTCAAGATA : GGATAGAAGGTACTTTGCCTTTAGAACCTTGGTATATAGGTGGTCCTGTCATTAAGGGATTTGGGCGCGGCTCAAAGGTTCTCGGGATCCCCACAG : CTAATTTATCCCCACAAGGTTATTCAGCCATTCTTTCAGAACATCCAGCGGGTGTATATTTTGGATGGGCAGGACTATCAGGTCGAGGTGTCTACAAGATGGTCATGAGCATTGGTTGGAATCCTTTCTTCAACAATACAGAGAAGACGGTT : GAACCATGGTTGCTTCATGACTTCAATGAGGACTTCTATGGTGAGGAATTGCATCTAGTTGTTGTGGGCTACATACGGCCGGAG : GCCAACTTTTCGTCACTTGAAGCCTTGATAGCAAAAATTCACGAGGACAGGAAGATTGCAGAAAGAGCTCTCGAACTTCCTCAATACTTGAAGTACAAGGACGATCCATACCTTAAAAGTTCTCTGCATCAACAAAATTGATCATTGAAGTGTTGAAGTTCATTATTGTTCTGATTGGGATTGTATCTGTTTATTCTGTCCTAATTCCTCAGACTACAATAGTCTCCCCATCAAAATGCTCTATACAATAAAAAGATAAAAAGAATTTGAATGTATAGCTATTCAGAAGTTAAAGAACCTTCCAGGGGGTATTAGTGAATGGCAAAGGGTTCAAGTGCAGGATCTTTGTACTGAGAATTTCAAGTTCCTGTGTAAATGTTGATTAATGTAACTTGTTTTCTATCTGTTTATAATATGGAAACATGCA</gDNA_template>
            <first_frame> N  Q  E  K  V  E  V  L  H  L  L  S  S  I  I  N  W  *  S  W  I  :  I  I  A  L  H  V  C  *  T  N  F  Q  E  A  S  F  W  C  H  P  *  F  G  W  Y  T  S  *  Y  R :   W  H  C  E  *  D  F  K  G  F  L  S  *  V  W  K  A  M  G  W  E  R  S  S  P  H  S  R  E  N  P  N  R  S  C  C  C  R  C  *  R  L  W  A  A  T  V  K  R  *  I  S  F  A  I  L  P  N  A  V  *  S  :  V  A  Q  Y  Q  S  S  S  R  G  Q  S  I  D  *  P  F  E  R  S  W  C  T  H  G  I  G  V  K  F  F  *  I  *  H  *  G  Q  N  F  S  S  C  R  *  S  S  N  M  Y  C  *  R  G  I  S  F  L  R  K  V  F  C  A  S  P  A  C  K  M  A  F  M  L  G  A  L  I  G  I  V  F  I  F  F  Q  D  G  K  S  P  S  Q  L  L  L  E  E  M  K  *  K  L  E  S  R  L  R  K   : Y  F  L  K  Q  L  K  D  S  T  W  I  H  P  A  F  L  S  L  K  I  Q   : Y  L  Q  L  E  K  W  G  L  P  A  F  Q  D   : R  I  E  G  T  L  P  L  E  P  W  Y  I  G  G  P  V  I  K  G  F  G  R  G  S  K  V  L  G  I  P  T   : A  N  L  S  P  Q  G  Y  S  A  I  L  S  E  H  P  A  G  V  Y  F  G  W  A  G  L  S  G  R  G  V  Y  K  M  V  M  S  I  G  W  N  P  F  F  N  N  T  E  K  T  V  :  E  P  W  L  L  H  D  F  N  E  D  F  Y  G  E  E  L  H  L  V  V  V  G  Y  I  R  P  E  :  A  N  F  S  S  L  E  A  L  I  A  K  I  H  E  D  R  K  I  A  E  R  A  L  E  L  P  Q  Y  L  K  Y  K  D  D  P  Y  L  K  S  S  L  H  Q  Q  N  *  S  L  K  C  *  S  S  L  L  F  *  L  G  L  Y  L  F  I  L  S  *  F  L  R  L  Q  *  S  P  H  Q  N  A  L  Y  N  K  K  I  K  R  I  *  M  Y  S  Y  S  E  V  K  E  P  S  R  G  Y  *  *  M  A  K  G  S  S  A  G  S  L  Y  *  E  F  Q  V  P  V  *  M  L  I  N  V  T  C  F  L  S  V  Y  N  M  E  T  C  </first_frame>
            <second_frame>  T  K  K  K  L  K  C  F  I  F  S  V  Q  *  S  I  G  E  V  G  L :   *  L  L  S  M  S  V  E  R  T  F  K  K  L  V  S  G  V  I  L  D  L  D  G  T  L  L  N  T   : D  G  I  V  S  E  I  L  K  V  F  L  V  K  Y  G  K  Q  W  D  G  R  E  A  P  H  I  V  G  K  T  P  T  E  A  A  A  A  V  V  E  D  Y  G  L  P  L  S  R  D  E  F  L  S  Q  F  Y  P  M  L  S  D  Q :   W  R  N  I  K  A  L  P  G  A  N  R  L  I  N  H  L  S  G  H  G  V  P  M  A  L  A  S  N  S  S  K  S  N  I  E  A  K  I  F  H  H  A  G  R  V  L  T  C  I  A  R  E  V  F  L  S  L  G  R  Y  F  V  P  V  Q  H  V  R  W  H  L  C  L  V  L  *  L  G  *  S  L  F  F  F  R  M  E  R  V  L  L  S  Y  C  W  R  R  *  S  E  S  W  K  A  V  S  G  N  :  I  S  *  S  S  *  K  T  Q  H  G  S  I  Q  L  S  C  H  *  R  F  N  :  I  C  N  *  K  S  G  D  Y  L  H  F  K  I  :  G  *  K  V  L  C  L  *  N  L  G  I  *  V  V  L  S  L  R  D  L  G  A  A  Q  R  F  S  G  S  P  Q  :  L  I  Y  P  H  K  V  I  Q  P  F  F  Q  N  I  Q  R  V  Y  I  L  D  G  Q  D  Y  Q  V  E  V  S  T  R  W  S  *  A  L  V  G  I  L  S  S  T  I  Q  R  R  R  L :   N  H  G  C  F  M  T  S  M  R  T  S  M  V  R  N  C  I  *  L  L  W  A  T  Y  G  R  R :   P  T  F  R  H  L  K  P  *  *  Q  K  F  T  R  T  G  R  L  Q  K  E  L  S  N  F  L  N  T  *  S  T  R  T  I  H  T  L  K  V  L  C  I  N  K  I  D  H  *  S  V  E  V  H  Y  C  S  D  W  D  C  I  C  L  F  C  P  N  S  S  D  Y  N  S  L  P  I  K  M  L  Y  T  I  K  R  *  K  E  F  E  C  I  A  I  Q  K  L  K  N  L  P  G  G  I  S  E  W  Q  R  V  Q  V  Q  D  L  C  T  E  N  F  K  F  L  C  K  C  *  L  M  *  L  V  F  Y  L  F  I  I  W  K  H  A </second_frame>
            <third_frame>   P  R  K  S  *  S  A  S  S  S  Q  F  N  N  Q  L  V  K  L  D   : Y  N  C  S  P  C  L  L  N  E  L  S  R  S  *  F  L  V  S  S  L  I  W  M  V  H  F  L  I  Q  :  M  A  L  *  V  R  F  *  R  F  S  *  L  S  M  E  S  N  G  M  G  E  K  L  P  T  *  *  G  K  P  Q  Q  K  L  L  L  P  L  L  K  I  M  G  C  H  C  Q  E  M  N  F  F  R  N  F  T  Q  C  C  L  I   : S  G  A  I  S  K  L  F  Q  G  P  I  D  *  L  T  I  *  A  V  M  V  Y  P  W  H  W  R  Q  I  L  L  N  L  T  L  R  P  K  F  F  I  M  Q  V  E  F  *  H  V  L  L  E  R  Y  F  F  P  *  E  G  I  L  C  Q  S  S  M  *  D  G  I  Y  A  W  C  F  D  W  D  S  L  Y  F  F  S  G  W  K  E  S  F  S  A  I  V  G  G  D  E  V  K  A  G  K  P  S  P  E  I :   F  L  E  A  A  K  R  L  N  M  D  P  S  S  F  L  V  I  E  D  S  I :   F  A  T  R  K  V  G  T  T  C  I  S  R  * :   D  R  R  Y  F  A  F  R  T  L  V  Y  R  W  S  C  H  *  G  I  W  A  R  L  K  G  S  R  D  P  H  S :   *  F  I  P  T  R  L  F  S  H  S  F  R  T  S  S  G  C  I  F  W  M  G  R  T  I  R  S  R  C  L  Q  D  G  H  E  H  W  L  E  S  F  L  Q  Q  Y  R  E  D  G   : *  T  M  V  A  S  *  L  Q  *  G  L  L  W  *  G  I  A  S  S  C  C  G  L  H  T  A  G   : G  Q  L  F  V  T  *  S  L  D  S  K  N  S  R  G  Q  E  D  C  R  K  S  S  R  T  S  S  I  L  E  V  Q  G  R  S  I  P  *  K  F  S  A  S  T  K  L  I  I  E  V  L  K  F  I  I  V  L  I  G  I  V  S  V  Y  S  V  L  I  P  Q  T  T  I  V  S  P  S  K  C  S  I  Q  *  K  D  K  K  N  L  N  V  *  L  F  R  S  *  R  T  F  Q  G  V  L  V  N  G  K  G  F  K  C  R  I  F  V  L  R  I  S  S  S  C  V  N  V  D  *  C  N  L  F  S  I  C  L  *  Y  G  N  M   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0329G05.3" strand="-"/>
                <serials PGL_serial="2" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="21920" stop="21896"/>
                    <exon start="21804" stop="21739"/>
                    <exon start="21077" stop="21036"/>
                    <exon start="20950" stop="20855"/>
                    <exon start="20576" stop="20425"/>
                    <exon start="20347" stop="20264"/>
                    <exon start="20188" stop="20048"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>603</number_coding_nucleotides>
                  <number_encoded_amino_acids>201</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KLESRLRKYFLKQLKDSTWIHPAFLSLKIQYLQLEKWGLPAFQDRIEGTLPLEPWYIGGPVIKGFGRGSKVLGIPTANLSPQGYSAILSEHPAGVYFGWAGLSGRGVYKMVMSIGWNPFFNNTEKTVEPWLLHDFNEDFYGEELHLVVVGYIRPEANFSSLEALIAKIHEDRKIAERALELPQYLKYKDDPYLKSSLHQQN*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0329G05.3" strand="-"/>
                <serials PGL_serial="2" AGS_serial="4" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="24004" stop="23920"/>
                    <exon start="23322" stop="23136"/>
                    <exon start="22223" stop="21992"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>501</number_coding_nucleotides>
                  <number_encoded_amino_acids>167</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLSMSVERTFKKLVSGVILDLDGTLLNTDGIVSEILKVFLVKYGKQWDGREAPHIVGKTPTEAAAAVVEDYGLPLSRDEFLSQFYPMLSDQWRNIKALPGANRLINHLSGHGVPMALASNSSKSNIEAKIFHHAGRVLTCIAREVFLSLGRYFVPVQHVRWHLCLVL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="19745" PGL_stop="20194"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="19745" e_stop="20194"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.918"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.918">
            <gDNA_exon_boundary e_start="19745" e_stop="20194" e_length="450"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19745" stop="20194"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U587890" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TACAATCTGCATCAGCTTGCATGTTTCCATATTATAAACAGATAGAAAACAAGTTACATTAATCAACATTTACACAGGAACTTGAAATTCTCAGTACAAAGATCCTGCACTTGAACCCTTTGCCATTCACTAATACCCCCTGGAAGGTTCTTTAACTTCTGAATAGCTATACATTCAAATTCTTTTTATCTTTTTATTGTATAGAGCATTTTGATGGGGAGACTATTGTAGTCTGAGGAATTAGGACAGAATAAACAGATACAATCCCAATCAGAACAATAATGAACTTCAACACTTCAATGATCAATTTTGTTGATGCAGAGAACTTTTAAGGTATGGATCGTCCTTGTACTTCAAGTATTGAGGAAGTTCGAGAGCTCTTTCTGCAATCTTCCTGTCCTCGTGAATTTTTGCTATCAAGGCTTCAAGTGACGAAAAGTTGGCCTGCAA</gDNA_template>
            <first_frame> Y  N  L  H  Q  L  A  C  F  H  I  I  N  R  *  K  T  S  Y  I  N  Q  H  L  H  R  N  L  K  F  S  V  Q  R  S  C  T  *  T  L  C  H  S  L  I  P  P  G  R  F  F  N  F  *  I  A  I  H  S  N  S  F  Y  L  F  I  V  *  S  I  L  M  G  R  L  L  *  S  E  E  L  G  Q  N  K  Q  I  Q  S  Q  S  E  Q  *  *  T  S  T  L  Q  *  S  I  L  L  M  Q  R  T  F  K  V  W  I  V  L  V  L  Q  V  L  R  K  F  E  S  S  F  C  N  L  P  V  L  V  N  F  C  Y  Q  G  F  K  *  R  K  V  G  L  Q </first_frame>
            <second_frame>  T  I  C  I  S  L  H  V  S  I  L  *  T  D  R  K  Q  V  T  L  I  N  I  Y  T  G  T  *  N  S  Q  Y  K  D  P  A  L  E  P  F  A  I  H  *  Y  P  L  E  G  S  L  T  S  E  *  L  Y  I  Q  I  L  F  I  F  L  L  Y  R  A  F  *  W  G  D  Y  C  S  L  R  N  *  D  R  I  N  R  Y  N  P  N  Q  N  N  N  E  L  Q  H  F  N  D  Q  F  C  *  C  R  E  L  L  R  Y  G  S  S  L  Y  F  K  Y  *  G  S  S  R  A  L  S  A  I  F  L  S  S  *  I  F  A  I  K  A  S  S  D  E  K  L  A  C   </second_frame>
            <third_frame>   Q  S  A  S  A  C  M  F  P  Y  Y  K  Q  I  E  N  K  L  H  *  S  T  F  T  Q  E  L  E  I  L  S  T  K  I  L  H  L  N  P  L  P  F  T  N  T  P  W  K  V  L  *  L  L  N  S  Y  T  F  K  F  F  L  S  F  Y  C  I  E  H  F  D  G  E  T  I  V  V  *  G  I  R  T  E  *  T  D  T  I  P  I  R  T  I  M  N  F  N  T  S  M  I  N  F  V  D  A  E  N  F  *  G  M  D  R  P  C  T  S  S  I  E  E  V  R  E  L  F  L  Q  S  S  C  P  R  E  F  L  L  S  R  L  Q  V  T  K  S  W  P  A  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0329G05.3"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="49359" PGL_stop="55957"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="49359" e_stop="49498"/>
            <exon e_start="50704" e_stop="50764"/>
            <exon e_start="52409" e_stop="52527"/>
            <exon e_start="54748" e_stop="54881"/>
            <exon e_start="55021" e_stop="55171"/>
            <exon e_start="55266" e_stop="55425"/>
            <exon e_start="55501" e_stop="55957"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.981" e_score="1.000"/>
          <exon-intron don_prob="0.844" acc_prob="0.953" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.984" e_score="1.000"/>
          <exon-intron don_prob="0.973" acc_prob="0.949" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.296" e_score="1.000"/>
          <exon-intron don_prob="0.802" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="49359" e_stop="49498" e_length="140"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.981">
            <gDNA_intron_boundary i_start="49499" i_stop="50703" i_length="1205"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="50704" e_stop="50764" e_length="61"/>
          </exon>
          <intron i_serial="2" don_prob="0.844" acc_prob="0.953">
            <gDNA_intron_boundary i_start="50765" i_stop="52408" i_length="1644"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="52409" e_stop="52527" e_length="119"/>
          </exon>
          <intron i_serial="3" don_prob="0.992" acc_prob="0.984">
            <gDNA_intron_boundary i_start="52528" i_stop="54747" i_length="2220"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="54748" e_stop="54881" e_length="134"/>
          </exon>
          <intron i_serial="4" don_prob="0.973" acc_prob="0.949">
            <gDNA_intron_boundary i_start="54882" i_stop="55020" i_length="139"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="55021" e_stop="55171" e_length="151"/>
          </exon>
          <intron i_serial="5" don_prob="0.989" acc_prob="0.296">
            <gDNA_intron_boundary i_start="55172" i_stop="55265" i_length="94"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="55266" e_stop="55425" e_length="160"/>
          </exon>
          <intron i_serial="6" don_prob="0.802" acc_prob="1.000">
            <gDNA_intron_boundary i_start="55426" i_stop="55500" i_length="75"/>
          </intron>
          <exon e_serial="7" e_score="0.996">
            <gDNA_exon_boundary e_start="55501" e_stop="55957" e_length="457"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49359" stop="49498"/>
              <exon start="50704" stop="50764"/>
              <exon start="52409" stop="52527"/>
              <exon start="54748" stop="54881"/>
              <exon start="55021" stop="55171"/>
              <exon start="55266" stop="55425"/>
              <exon start="55501" stop="55957"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U581277" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50707" stop="50764"/>
              <exon start="52409" stop="52527"/>
              <exon start="54748" stop="54781"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U593081" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTGACTGCTTGTTTTTCTTTCTCCATCTTGGACTGCTTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT : ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG : AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG : GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG : GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG : AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAG : GTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGCATGTTAGGCCGTTTTTTTCACCTTTCTAGCTACATCAGTCTGGAGATCTTTTGAATCTACTAGTGACAACTACGAGGAAGATCTTGGGGCCATGTTACCTCCCTATTCTGGAGTCTTATTGAGTGTGTCATATCTTTTTCTTTCTGTTCCGTCGGGTCAAATAAGAAAGTATCCTTTGTTTTGTTTACATTTTGTGGTCAGTTACTGGTTGGAGATCCGTTGGTAAATGATTTGTCGGTTGATCTGCATTCTCTTGTATGATTCAGATCTCAGATTTTGGACCTATAGATTTCATGTAACTGTCTTATTCAAAACTATTTGATCCTTTCTTTTCATAT</gDNA_template>
            <first_frame> L  T  A  C  F  S  F  S  I  L  D  C  L  S  Q  G  H  F  G  H  Q  K  R  C  F  T  F  C  Y  C  L  T  I  F  H  Q  I  C  S  P  L  V  I  S  L  P  I :   Y  S  N  L  T  S  F  C  G  R  K  R  I  N  W  R  W  R  I  G  :  R  I  Y  Q  F  Q  I  Y  L  R  R  I  S  Q  Q  V  N  G  M  M  K  M  Q  M  M  M  M  *  K  N  L  G  K  M  K  R  S  L  L  R :   H  L  N  Q  N  L  L  L  R  R  P  P  R  S  L  L  Q  R  L  V  K  R  K  A  R  K  F  I  L  M  K  S  L  *  I  Q  *  Q  K  N  F  A  S  K   : G  L  *  K  K  L  I  I  S  P  R  L  N  C  L  P  R  K  V  V  M  T  R  P  *  K  I  L  S  Q  K  V  R  V  T  S  W  N  M  L  S  *  Y  L  I  S  C  D  R  L  R :   K  A  T  T  T  L  G  C  S  R  L  L  *  D  C  R  *  P  R  *  K  G  K  M  L  K  T  L  V  L  L  L  L  H  L  Q  M  R  R  L  K  Q  K  R  K  P  L  R  V  K  R  R  Q  :  V  Q  R  R  S  S  Y  M  L  I  R  Q  M  M  M  Q  *  *  M  H  M  M  V  M  M  I  M  I  S  C  E  E  G  E  T  *  Q  R  Q  A  C  *  A  V  F  F  T  F  L  A  T  S  V  W  R  S  F  E  S  T  S  D  N  Y  E  E  D  L  G  A  M  L  P  P  Y  S  G  V  L  L  S  V  S  Y  L  F  L  S  V  P  S  G  Q  I  R  K  Y  P  L  F  C  L  H  F  V  V  S  Y  W  L  E  I  R  W  *  M  I  C  R  L  I  C  I  L  L  Y  D  S  D  L  R  F  W  T  Y  R  F  H  V  T  V  L  F  K  T  I  *  S  F  L  F  I  </first_frame>
            <second_frame>  *  L  L  V  F  L  S  P  S  W  T  A  *  A  K  G  I  L  V  I  R  N  A  A  S  H  S  A  I  A  *  P  F  F  I  R  F  V  H  L  W  L  S  L  F  P   : Y  T  R  T  *  Q  V  F  V  D  G  R  E  L  T  G  D  G  G  L  G :   G  Y  T  S  S  R  S  T  *  E  G  S  A  N  K  *  M  G  *  *  R  C  R  *  *  *  C  K  R  I  L  G  R  *  R  G  A  C  S   : G  T  *  T  R  T  S  C  *  E  G  P  Q  E  V  C  C  K  G  W  *  K  E  R  Q  G  S  S  Y  *  *  R  A  S  R  S  S  S  R  K  T  S  P  A  K  :  A  C  R  R  S  *  L  *  V  H  G  *  I  V  C  Q  E  R  W  *  *  Q  D  P  R  K  F  Y  P  K  K  *  E  *  L  L  G  I  C  *  A  D  I  S  *  A  A  T  V  *   : E  K  L  P  L  H  W  V  A  Q  G  C  Y  E  I  V  D  D  L  V  E  R  A  R  C  *  R  H  W  F  F  Y  Y  C  I  C  K  *  E  D  *  S  R  K  G  S  H  C  E  *  K  E  D  R :   C  K  E  E  A  A  T  C  *  *  G  R  *  *  C  S  S  K  C  I  *  W  L  *  *  L  *  F  H  V  K  R  G  K  L  S  K  D  R  H  V  R  P  F  F  S  P  F  *  L  H  Q  S  G  D  L  L  N  L  L  V  T  T  T  R  K  I  L  G  P  C  Y  L  P  I  L  E  S  Y  *  V  C  H  I  F  F  F  L  F  R  R  V  K  *  E  S  I  L  C  F  V  Y  I  L  W  S  V  T  G  W  R  S  V  G  K  *  F  V  G  *  S  A  F  S  C  M  I  Q  I  S  D  F  G  P  I  D  F  M  *  L  S  Y  S  K  L  F  D  P  F  F  S  Y </second_frame>
            <third_frame>   D  C  L  F  F  F  L  H  L  G  L  L  E  P  R  A  F  W  S  S  E  T  L  L  H  I  L  L  L  L  N  H  F  S  S  D  L  F  T  S  G  Y  L  S  S  H  :  I  L  E  L  N  K  F  L  W  T  E  E  N  *  L  E  M  E  D  W   : E  D  I  P  V  P  D  L  L  K  K  D  Q  P  T  S  K  W  D  D  E  D  A  D  D  D  D  V  K  E  S  W  E  D  E  E  E  P  A  P  :  A  P  K  P  E  P  P  A  E  K  A  P  K  K  S  A  A  K  A  G  E  K  K  G  K  E  V  H  T  N  E  E  P  L  D  P  V  A  E  K  L  R  Q  Q  R :   L  V  E  E  A  D  Y  K  S  T  A  E  L  F  A  K  K  G  G  D  D  K  T  L  E  N  F  I  P  K  S  E  S  D  F  L  E  Y  A  E  L  I  S  H  K  L  R  P  F  E  :  K  S  Y  H  Y  I  G  L  L  K  A  V  M  R  L  S  M  T  S  L  K  G  Q  D  A  K  D  I  G  S  S  I  T  A  F  A  N  E  K  I  K  A  E  K  E  A  T  A  S  K  K  K  T   : G  A  K  K  K  Q  L  H  V  D  K  A  D  D  D  A  V  V  N  A  Y  D  G  Y  D  D  Y  D  F  M  *  R  G  G  N  L  A  K  T  G  M  L  G  R  F  F  H  L  S  S  Y  I  S  L  E  I  F  *  I  Y  *  *  Q  L  R  G  R  S  W  G  H  V  T  S  L  F  W  S  L  I  E  C  V  I  S  F  S  F  C  S  V  G  S  N  K  K  V  S  F  V  L  F  T  F  C  G  Q  L  L  V  G  D  P  L  V  N  D  L  S  V  D  L  H  S  L  V  *  F  R  S  Q  I  L  D  L  *  I  S  C  N  C  L  I  Q  N  Y  L  I  L  S  F  H   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0329G05.3" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="50746" stop="50764"/>
                    <exon start="52409" stop="52527"/>
                    <exon start="54748" stop="54881"/>
                    <exon start="55021" stop="55171"/>
                    <exon start="55266" stop="55425"/>
                    <exon start="55501" stop="55592"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>672</number_coding_nucleotides>
                  <number_encoded_amino_acids>224</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LEMEDWEDIPVPDLLKKDQPTSKWDDEDADDDDVKESWEDEEEPAPAPKPEPPAEKAPKKSAAKAGEKKGKEVHTNEEPLDPVAEKLRQQRLVEEADYKSTAELFAKKGGDDKTLENFIPKSESDFLEYAELISHKLRPFEKSYHYIGLLKAVMRLSMTSLKGQDAKDIGSSITAFANEKIKAEKEATASKKKTGAKKKQLHVDKADDDAVVNAYDGYDDYDFM*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0329G05.3" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="55627" stop="55845"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>216</number_coding_nucleotides>
                  <number_encoded_amino_acids>72</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AVFFTFLATSVWRSFESTSDNYEEDLGAMLPPYSGVLLSVSYLFLSVPSGQIRKYPLFCLHFVVSYWLEIRW*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="49509" e_stop="50114"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="49509" e_stop="50114" e_length="606"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49509" stop="50114"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U567652" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGTTATGTTTT</gDNA_template>
            <first_frame> P  S  S  S  I  G  L  L  L  C  F  W  F  I  R  S  I  L  F  L  G  S  I  Y  C  F  S  L  R  L  A  S  S  E  V  Y  I  C  V  S  I  *  V  A  R  I  I  S  Y  I  L  V  S  M  N  G  N  *  G  F  R  I  C  N  F  *  E  L  I  *  W  R  F  *  G  S  A  A  F  A  D  L  L  Y  N  V  R  P  T  R  T  L  M  L  I  D  T  F  F  F  H  C  F  M  V  F  D  K  S  L  C  V  *  V  L  I  *  F  G  Q  R  G  D  V  L  D  *  Y  W  R  F  I  D  T  V  L  W  F  L  T  I  L  Y  V  W  V  L  I  E  S  W  E  *  G  E  F  L  D  *  Y  W  S  S  I  D  I  V  L  W  F  L  T  S  L  Y  V  W  V  L  I  E  S  W  E  R  G  D  F  L  D  *  Y  W  G  S  I  D  I  V  L  C  F </first_frame>
            <second_frame>  L  L  H  L  L  G  Y  C  S  V  F  G  L  F  V  Q  S  C  F  L  V  Q  F  I  V  F  L  C  D  W  R  L  R  R  Y  I  Y  A  S  V  F  E  S  H  A  S  Y  H  I  F  L  C  L  *  T  E  I  R  A  F  G  F  V  T  F  E  N  *  F  S  G  G  F  R  V  Q  P  P  L  P  T  F  Y  T  M  S  D  R  L  E  H  *  C  *  L  T  L  F  S  S  T  V  L  W  F  L  T  S  L  C  V  C  R  Y  *  Y  N  L  G  S  E  V  M  F  L  I  N  I  G  V  L  L  T  L  C  Y  G  F  *  Q  F  C  M  C  G  Y  *  *  N  L  G  S  E  V  N  F  L  I  N  I  G  V  P  L  T  L  C  Y  G  F  *  Q  V  C  M  C  G  Y  *  *  N  L  G  S  E  V  I  F  L  I  S  I  G  V  P  L  T  L  C  Y  V   </second_frame>
            <third_frame>   F  F  I  Y  W  V  I  A  L  F  L  V  Y  S  F  N  L  V  S  W  F  N  L  L  F  F  S  A  I  G  V  F  G  G  I  Y  M  R  Q  Y  L  S  R  T  H  H  I  I  Y  S  C  V  Y  E  R  K  L  G  L  S  D  L  *  L  L  R  T  D  L  V  A  V  L  G  F  S  R  L  C  R  P  F  I  Q  C  P  T  D  S  N  T  D  V  N  *  H  F  F  L  P  L  F  Y  G  F  *  Q  V  S  V  C  V  G  I  D  I  I  W  A  A  R  *  C  S  *  L  I  L  A  F  Y  *  H  C  V  M  V  F  D  N  F  V  C  V  G  I  D  R  I  L  G  V  R  *  I  S  *  L  I  L  E  F  H  *  H  C  V  M  V  F  D  K  F  V  C  V  G  I  N  R  I  L  G  A  R  *  F  S  *  L  V  L  G  F  H  *  H  C  V  M  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0329G05.3"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="49393" e_stop="49498"/>
            <exon e_start="50704" e_stop="50764"/>
            <exon e_start="51494" e_stop="52237"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.981" e_score="1.000"/>
          <exon-intron don_prob="0.844" acc_prob="0.821" e_score="1.000"/>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="49393" e_stop="49498" e_length="106"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.981">
            <gDNA_intron_boundary i_start="49499" i_stop="50703" i_length="1205"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="50704" e_stop="50764" e_length="61"/>
          </exon>
          <intron i_serial="2" don_prob="0.844" acc_prob="0.821">
            <gDNA_intron_boundary i_start="50765" i_stop="51493" i_length="729"/>
          </intron>
          <exon e_serial="3" e_score="0.995">
            <gDNA_exon_boundary e_start="51494" e_stop="52237" e_length="744"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49393" stop="49498"/>
              <exon start="50704" stop="50764"/>
              <exon start="51494" stop="52237"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U580250" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCTTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT : ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG : GTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGA</gDNA_template>
            <first_frame> A  *  A  K  G  I  L  V  I  R  N  A  A  S  H  S  A  I  A  *  P  F  F  I  R  F  V  H  L  W  L  S  L  F  P   : Y  T  R  T  *  Q  V  F  V  D  G  R  E  L  T  G  D  G  G  L  G :   C  Q  E  D  A  K  G  T  K  E  R  C  I  Q  R  N  Y  I  R  F  R  E  L  K  S  K  T  D  Q  C  N  L  R  C  S  N  *  L  T  R  H  L  A  F  E  E  W  T  D  L  R  F  H  Q  N  I  Y  G  S  N  C  V  S  T  P  K  D  I  H  R  D  H  N  P  D  L  L  *  L  *  N  F  I  N  S  K  I  H  R  L  L  *  L  S  V  V  *  P  Y  *  L  Q  N  R  V  E  R  F  L  K  S  A  T  I  L  F  *  P  Y  I  C  F  V  I  T  H  T  T  T  G  F  C  V  W  Q  K  *  N  G  I  N  N  N  L  R  I  H  L  T  N  Q  W  *  A  A  Y  A  V  S  I  V  V  S  V  *  *  Y  L  L  L  D  C  L  S  A  Q  P  I  H  L  N  S  L  V  H  F  L  A  *  H  L  Q  E  A  T  T  I  V  T  G  *  L  F  T  V  I  G  I  K  P  *  M  L  V  P  Y  F  W  R  F  C  L  F  K  P  V  Y  F  W  V  *  F  I  C  L  S  E  K  T  W  I  P  S  P  W  D  I   </first_frame>
            <second_frame>  L  E  P  R  A  F  W  S  S  E  T  L  L  H  I  L  L  L  L  N  H  F  S  S  D  L  F  T  S  G  Y  L  S  S  H  :  I  L  E  L  N  K  F  L  W  T  E  E  N  *  L  E  M  E  D  W   : G  V  K  K  M  Q  K  V  Q  K  R  D  A  S  K  E  T  I  L  D  L  G  S  *  S  P  K  Q  T  S  A  I  *  G  A  P  T  N  *  P  G  I  *  L  L  K  S  G  R  I  *  D  S  I  K  T  Y  T  V  L  T  V  *  V  H  Q  K  I  F  T  G  I  I  I  R  I  S  S  D  F  K  T  S  S  T  P  R  F  I  D  F  C  D  S  L  W  Y  D  P  I  D  F  K  I  E  *  N  D  S  S  S  Q  Q  Q  F  C  F  S  L  I  Y  A  L  S  S  L  T  P  Q  Q  G  F  V  C  G  R  N  E  T  E  *  T  I  I  *  E  F  I  S  L  I  N  G  K  L  L  M  L  S  L  L  W  *  A  F  N  N  T  C  F  W  I  V  *  V  L  S  L  F  T  *  T  H  W  F  I  F  *  H  S  I  Y  K  K  Q  L  P  L  *  L  V  D  C  S  Q  *  L  E  *  N  H  R  C  W  F  P  I  S  G  D  F  A  C  S  N  Q  F  I  F  G  F  D  S  F  V  F  L  R  R  L  G  F  P  L  H  G  T  L  </second_frame>
            <third_frame>   L  S  Q  G  H  F  G  H  Q  K  R  C  F  T  F  C  Y  C  L  T  I  F  H  Q  I  C  S  P  L  V  I  S  L  P  I :   Y  S  N  L  T  S  F  C  G  R  K  R  I  N  W  R  W  R  I  G  :  V  S  R  R  C  K  R  Y  K  R  E  M  H  P  K  K  L  Y  *  I  *  G  A  K  V  Q  N  R  P  V  Q  F  E  V  L  Q  L  I  N  Q  A  S  S  F  *  R  V  D  G  F  E  I  P  S  K  H  I  R  F  *  L  C  K  Y  T  K  R  Y  S  Q  G  S  *  S  G  S  P  L  T  L  K  L  H  Q  L  Q  D  S  *  T  S  V  T  L  C  G  M  T  L  L  T  S  K  *  S  R  T  I  P  Q  V  S  N  N  F  V  L  A  L  Y  M  L  C  H  H  S  H  H  N  R  V  L  C  V  A  E  M  K  R  N  K  Q  *  S  K  N  S  S  H  *  S  M  V  S  C  L  C  C  L  Y  C  G  K  R  L  I  I  L  A  S  G  L  S  K  C  S  A  Y  S  L  E  L  T  G  S  F  F  S  I  A  F  T  R  S  N  Y  H  C  N  W  L  T  V  H  S  N  W  N  K  T  I  D  V  G  S  L  F  L  E  I  L  L  V  Q  T  S  L  F  L  G  L  I  H  L  S  F  *  E  D  L  D  S  L  S  M  G  H  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0329G05.3" strand="+"/>
                <serials PGL_serial="4" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="51944" stop="52204"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>258</number_coding_nucleotides>
                  <number_encoded_amino_acids>86</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SMVSCLCCLYCGKRLIILASGLSKCSAYSLELTGSFFSIAFTRSNYHCNWLTVHSNWNKTIDVGSLFLEILLVQTSLFLGLIHLSF*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0329G05.3" strand="+"/>
                <serials PGL_serial="4" AGS_serial="3" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="49395" stop="49498"/>
                    <exon start="50704" stop="50764"/>
                    <exon start="51494" stop="51550"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>219</number_coding_nucleotides>
                  <number_encoded_amino_acids>73</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LSQGHFGHQKRCFTFCYCLTIFHQICSPLVISLPIYSNLTSFCGRKRINWRWRIGVSRRCKRYKREMHPKKLY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="57023" PGL_stop="63089"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="57023" e_stop="57137"/>
            <exon e_start="57222" e_stop="57333"/>
            <exon e_start="57781" e_stop="57872"/>
            <exon e_start="58765" e_stop="58842"/>
            <exon e_start="59587" e_stop="59826"/>
            <exon e_start="59956" e_stop="60036"/>
            <exon e_start="60489" e_stop="60631"/>
            <exon e_start="62803" e_stop="62963"/>
            <exon e_start="63051" e_stop="63089"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="0.882" e_score="1.000"/>
          <exon-intron don_prob="0.982" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.974" acc_prob="0.959" e_score="1.000"/>
          <exon-intron don_prob="0.838" acc_prob="0.144" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.859" e_score="1.000"/>
          <exon-intron don_prob="0.942" acc_prob="0.859" e_score="1.000"/>
          <exon-intron don_prob="0.743" acc_prob="0.904" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="57023" e_stop="57137" e_length="115"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="57138" i_stop="57221" i_length="84"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="57222" e_stop="57333" e_length="112"/>
          </exon>
          <intron i_serial="2" don_prob="0.900" acc_prob="0.882">
            <gDNA_intron_boundary i_start="57334" i_stop="57780" i_length="447"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="57781" e_stop="57872" e_length="92"/>
          </exon>
          <intron i_serial="3" don_prob="0.982" acc_prob="0.992">
            <gDNA_intron_boundary i_start="57873" i_stop="58764" i_length="892"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="58765" e_stop="58842" e_length="78"/>
          </exon>
          <intron i_serial="4" don_prob="0.974" acc_prob="0.959">
            <gDNA_intron_boundary i_start="58843" i_stop="59586" i_length="744"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="59587" e_stop="59826" e_length="240"/>
          </exon>
          <intron i_serial="5" don_prob="0.838" acc_prob="0.144">
            <gDNA_intron_boundary i_start="59827" i_stop="59955" i_length="129"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="59956" e_stop="60036" e_length="81"/>
          </exon>
          <intron i_serial="6" don_prob="0.991" acc_prob="0.859">
            <gDNA_intron_boundary i_start="60037" i_stop="60488" i_length="452"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="60489" e_stop="60631" e_length="143"/>
          </exon>
          <intron i_serial="7" don_prob="0.942" acc_prob="0.859">
            <gDNA_intron_boundary i_start="60632" i_stop="62802" i_length="2171"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="62803" e_stop="62963" e_length="161"/>
          </exon>
          <intron i_serial="8" don_prob="0.743" acc_prob="0.904">
            <gDNA_intron_boundary i_start="62964" i_stop="63050" i_length="87"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="63051" e_stop="63089" e_length="39"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57023" stop="57137"/>
              <exon start="57222" stop="57333"/>
              <exon start="57781" stop="57872"/>
              <exon start="58765" stop="58842"/>
              <exon start="59587" stop="59826"/>
              <exon start="59956" stop="60036"/>
              <exon start="60489" stop="60631"/>
              <exon start="62803" stop="62963"/>
              <exon start="63051" stop="63089"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U562818" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGGAAGAAAAACCCAAAACCCCGCCCTCTTCAGCTGAGTAGCAGCGATGGAAACTGATGAAAACCAGCGGATTCTTCCATTTCAGCTTCAGTTCGACAAACCCATTGCTTCTCAG : ATTAAAATTGCTGAATGGAATCCAGAAAAAGATTTACTTGCTATGGTTACAGAAGACTCCAAGGTTCTACTTCATCGTTTCAATTGGCAAAGGCTCTGGACTGTTACTCCCG : GAAAGAACATAACTTCCATATGTTGGCGTCCTGATGGGAAAGCAATTGCAGTTGGGCTTGAAGATGGGACCATCTCCTTGCATGATGTAGAA : AATGGAAAGCTGCTGCGAAACATAAAATCCCACTCGGCTGATGTCGTGTGTCTCCATTGGGAGGAGGATGGGAAGAAG : GACATGAACAGTAATACCTCCAGTTATGAAGATCGAACTTCACGGTTCTTTCCTCCTCCCCCTAGAGTTCCTAAGATGCCTGGACTTGTACCTGGGGATAGTGGCTTCATGGATGATGGAGAGGATTCTTTCCAGGAGCTATCAAATTCTTCACATCAAAGATATAACATTTTATGTAGCGGGGACAAGGATGGAAGTATCTGCTTCAATATCTTTGGCATATTTCCAATAGGGACAGTT : AATATACACAACCTTGTTGTCTCCAGTTCACTCTCAAGCAGCAATGTTGCTAGCCGACTTCTGAATGCTTCCATTTGTAAG : GTGGCCTTGTCCAAAGATCTTTGCCATTTAGTAGTTTTGTGCAATGGGGAGCTGATCACAGATGAGGTTGATCAAGGTGAAGGACATCATGGGTTACTTGGCTTTCACTGCTTAGTCCTCAATACTTCAATATTTTCCAAAAG : GAAAACTGAACTTCACCAGGTTGCCCAACAGGCTTCCAACATTGAAGATCTGAGTGAAGTCATCCGGACATCACTATCAGTCATGTCTAAAATATGGTCCGATGCTATGCATACATTTCACGAGAAGTTCAATGCTGTATCCACATTGATCGCTGATCATG : GACTTGACTCTACTCCTCAGGATGAGTTTCTAAGCCTTT</gDNA_template>
            <first_frame> R  K  K  N  P  K  P  R  P  L  Q  L  S  S  S  D  G  N  *  *  K  P  A  D  S  S  I  S  A  S  V  R  Q  T  H  C  F  S   : D  *  N  C  *  M  E  S  R  K  R  F  T  C  Y  G  Y  R  R  L  Q  G  S  T  S  S  F  Q  L  A  K  A  L  D  C  Y  S  R :   K  E  H  N  F  H  M  L  A  S  *  W  E  S  N  C  S  W  A  *  R  W  D  H  L  L  A  *  C  R   : K  W  K  A  A  A  K  H  K  I  P  L  G  *  C  R  V  S  P  L  G  G  G  W  E  E   : G  H  E  Q  *  Y  L  Q  L  *  R  S  N  F  T  V  L  S  S  S  P  *  S  S  *  D  A  W  T  C  T  W  G  *  W  L  H  G  *  W  R  G  F  F  P  G  A  I  K  F  F  T  S  K  I  *  H  F  M  *  R  G  Q  G  W  K  Y  L  L  Q  Y  L  W  H  I  S  N  R  D  S   : *  Y  T  Q  P  C  C  L  Q  F  T  L  K  Q  Q  C  C  *  P  T  S  E  C  F  H  L  *   : G  G  L  V  Q  R  S  L  P  F  S  S  F  V  Q  W  G  A  D  H  R  *  G  *  S  R  *  R  T  S  W  V  T  W  L  S  L  L  S  P  Q  Y  F  N  I  F  Q  K  :  E  N  *  T  S  P  G  C  P  T  G  F  Q  H  *  R  S  E  *  S  H  P  D  I  T  I  S  H  V  *  N  M  V  R  C  Y  A  Y  I  S  R  E  V  Q  C  C  I  H  I  D  R  *  S  W :   T  *  L  Y  S  S  G  *  V  S  K  P   </first_frame>
            <second_frame>  G  R  K  T  Q  N  P  A  L  F  S  *  V  A  A  M  E  T  D  E  N  Q  R  I  L  P  F  Q  L  Q  F  D  K  P  I  A  S  Q  :  I  K  I  A  E  W  N  P  E  K  D  L  L  A  M  V  T  E  D  S  K  V  L  L  H  R  F  N  W  Q  R  L  W  T  V  T  P   : G  K  N  I  T  S  I  C  W  R  P  D  G  K  A  I  A  V  G  L  E  D  G  T  I  S  L  H  D  V  E  :  N  G  K  L  L  R  N  I  K  S  H  S  A  D  V  V  C  L  H  W  E  E  D  G  K  K  :  D  M  N  S  N  T  S  S  Y  E  D  R  T  S  R  F  F  P  P  P  P  R  V  P  K  M  P  G  L  V  P  G  D  S  G  F  M  D  D  G  E  D  S  F  Q  E  L  S  N  S  S  H  Q  R  Y  N  I  L  C  S  G  D  K  D  G  S  I  C  F  N  I  F  G  I  F  P  I  G  T  V  :  N  I  H  N  L  V  V  S  S  S  L  S  S  S  N  V  A  S  R  L  L  N  A  S  I  C  K  :  V  A  L  S  K  D  L  C  H  L  V  V  L  C  N  G  E  L  I  T  D  E  V  D  Q  G  E  G  H  H  G  L  L  G  F  H  C  L  V  L  N  T  S  I  F  S  K  R :   K  T  E  L  H  Q  V  A  Q  Q  A  S  N  I  E  D  L  S  E  V  I  R  T  S  L  S  V  M  S  K  I  W  S  D  A  M  H  T  F  H  E  K  F  N  A  V  S  T  L  I  A  D  H   : G  L  D  S  T  P  Q  D  E  F  L  S  L  </second_frame>
            <third_frame>   E  E  K  P  K  T  P  P  S  S  A  E  *  Q  R  W  K  L  M  K  T  S  G  F  F  H  F  S  F  S  S  T  N  P  L  L  L  R :   L  K  L  L  N  G  I  Q  K  K  I  Y  L  L  W  L  Q  K  T  P  R  F  Y  F  I  V  S  I  G  K  G  S  G  L  L  L  P  :  E  R  T  *  L  P  Y  V  G  V  L  M  G  K  Q  L  Q  L  G  L  K  M  G  P  S  P  C  M  M  *  K :   M  E  S  C  C  E  T  *  N  P  T  R  L  M  S  C  V  S  I  G  R  R  M  G  R  R :   T  *  T  V  I  P  P  V  M  K  I  E  L  H  G  S  F  L  L  P  L  E  F  L  R  C  L  D  L  Y  L  G  I  V  A  S  W  M  M  E  R  I  L  S  R  S  Y  Q  I  L  H  I  K  D  I  T  F  Y  V  A  G  T  R  M  E  V  S  A  S  I  S  L  A  Y  F  Q  *  G  Q  L :   I  Y  T  T  L  L  S  P  V  H  S  Q  A  A  M  L  L  A  D  F  *  M  L  P  F  V  R :   W  P  C  P  K  I  F  A  I  *  *  F  C  A  M  G  S  *  S  Q  M  R  L  I  K  V  K  D  I  M  G  Y  L  A  F  T  A  *  S  S  I  L  Q  Y  F  P  K   : G  K  L  N  F  T  R  L  P  N  R  L  P  T  L  K  I  *  V  K  S  S  G  H  H  Y  Q  S  C  L  K  Y  G  P  M  L  C  I  H  F  T  R  S  S  M  L  Y  P  H  *  S  L  I  M  :  D  L  T  L  L  L  R  M  S  F  *  A  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0329G05.3" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="57060" stop="57137"/>
                    <exon start="57222" stop="57333"/>
                    <exon start="57781" stop="57872"/>
                    <exon start="58765" stop="58842"/>
                    <exon start="59587" stop="59826"/>
                    <exon start="59956" stop="60036"/>
                    <exon start="60489" stop="60631"/>
                    <exon start="62803" stop="62963"/>
                    <exon start="63051" stop="63088"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1023</number_coding_nucleotides>
                  <number_encoded_amino_acids>341</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VAAMETDENQRILPFQLQFDKPIASQIKIAEWNPEKDLLAMVTEDSKVLLHRFNWQRLWTVTPGKNITSICWRPDGKAIAVGLEDGTISLHDVENGKLLRNIKSHSADVVCLHWEEDGKKDMNSNTSSYEDRTSRFFPPPPRVPKMPGLVPGDSGFMDDGEDSFQELSNSSHQRYNILCSGDKDGSICFNIFGIFPIGTVNIHNLVVSSSLSSSNVASRLLNASICKVALSKDLCHLVVLCNGELITDEVDQGEGHHGLLGFHCLVLNTSIFSKRKTELHQVAQQASNIEDLSEVIRTSLSVMSKIWSDAMHTFHEKFNAVSTLIADHGLDSTPQDEFLSL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="69367" PGL_stop="70741"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="69367" e_stop="69481"/>
            <exon e_start="69575" e_stop="69727"/>
            <exon e_start="69949" e_stop="70030"/>
            <exon e_start="70480" e_stop="70741"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.980" acc_prob="0.783" e_score="0.964"/>
          <exon-intron don_prob="0.988" acc_prob="0.929" e_score="0.974"/>
          <exon-intron don_prob="0.975" acc_prob="0.683" e_score="1.000"/>
          <exon-only e_score="0.985"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.964">
            <gDNA_exon_boundary e_start="69367" e_stop="69481" e_length="115"/>
          </exon>
          <intron i_serial="1" don_prob="0.980" acc_prob="0.783">
            <gDNA_intron_boundary i_start="69482" i_stop="69574" i_length="93"/>
          </intron>
          <exon e_serial="2" e_score="0.974">
            <gDNA_exon_boundary e_start="69575" e_stop="69727" e_length="153"/>
          </exon>
          <intron i_serial="2" don_prob="0.988" acc_prob="0.929">
            <gDNA_intron_boundary i_start="69728" i_stop="69948" i_length="221"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="69949" e_stop="70030" e_length="82"/>
          </exon>
          <intron i_serial="3" don_prob="0.975" acc_prob="0.683">
            <gDNA_intron_boundary i_start="70031" i_stop="70479" i_length="449"/>
          </intron>
          <exon e_serial="4" e_score="0.985">
            <gDNA_exon_boundary e_start="70480" e_stop="70741" e_length="262"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69367" stop="69481"/>
              <exon start="69575" stop="69727"/>
              <exon start="69949" stop="70030"/>
              <exon start="70480" stop="70741"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U587941" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69370" stop="69481"/>
              <exon start="69575" stop="69727"/>
              <exon start="69949" stop="70030"/>
              <exon start="70480" stop="70739"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U587940" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGTCAGGGGCCTTGCACGTGATTTGAGCAAAGTGGACAGTATACGTGATCCCATAGAAGCGGCCCTCTTATGTATTCCTGATGGATATCACTGTATTGATCTCTCGCTTTATAAA : GAGGGTCAAATTGTTTTACTATTAAACGAAACTGCAACCACTTCGGAGAGCTCTGGAAATGCTTTCATGATGATTCTACAAGCTGGTGACCTTTCATTTGTATCTCTTTCAAGATCTACCGCCCCCAATTCTTGGAAGCTTCACGAACTTCAG : GATTCTGCTATATACCTGCAACTGGAGAGTGAAAAGGTTCGAAGCATTCCTCATTCTGTGGTCTCTCCCTTGGCAGTTAGTG : CATCAAGAGGTGTAGCTTGTGTTTTTGCTGCAAGAAAGCGTGCTTTGGTTTACATCTTGGACGAAGATGAAGATGAAGTTTCTGATACAGAGTGACAGTACCTTGCTGTTCGCTGGGTCTTTTGCAGGATCTATCAATTTTGGGCAGATAAGCCAGTGTCTATCCCTTTTTACTAAATTGTAGACTCTTTGTACACTTCTAGTTAATAGTTATTAGTTGGATGATGTTAAAGCTGAAGAATCAACAAAATTCTACTTCACAT</gDNA_template>
            <first_frame> C  Q  G  P  C  T  *  F  E  Q  S  G  Q  Y  T  *  S  H  R  S  G  P  L  M  Y  S  *  W  I  S  L  Y  *  S  L  A  L  *   : R  G  S  N  C  F  T  I  K  R  N  C  N  H  F  G  E  L  W  K  C  F  H  D  D  S  T  S  W  *  P  F  I  C  I  S  F  K  I  Y  R  P  Q  F  L  E  A  S  R  T  S   : G  F  C  Y  I  P  A  T  G  E  *  K  G  S  K  H  S  S  F  C  G  L  S  L  G  S  *  C :   I  K  R  C  S  L  C  F  C  C  K  K  A  C  F  G  L  H  L  G  R  R  *  R  *  S  F  *  Y  R  V  T  V  P  C  C  S  L  G  L  L  Q  D  L  S  I  L  G  R  *  A  S  V  Y  P  F  L  L  N  C  R  L  F  V  H  F  *  L  I  V  I  S  W  M  M  L  K  L  K  N  Q  Q  N  S  T  S  H </first_frame>
            <second_frame>  V  R  G  L  A  R  D  L  S  K  V  D  S  I  R  D  P  I  E  A  A  L  L  C  I  P  D  G  Y  H  C  I  D  L  S  L  Y  K  :  E  G  Q  I  V  L  L  L  N  E  T  A  T  T  S  E  S  S  G  N  A  F  M  M  I  L  Q  A  G  D  L  S  F  V  S  L  S  R  S  T  A  P  N  S  W  K  L  H  E  L  Q  :  D  S  A  I  Y  L  Q  L  E  S  E  K  V  R  S  I  P  H  S  V  V  S  P  L  A  V  S   : A  S  R  G  V  A  C  V  F  A  A  R  K  R  A  L  V  Y  I  L  D  E  D  E  D  E  V  S  D  T  E  *  Q  Y  L  A  V  R  W  V  F  C  R  I  Y  Q  F  W  A  D  K  P  V  S  I  P  F  Y  *  I  V  D  S  L  Y  T  S  S  *  *  L  L  V  G  *  C  *  S  *  R  I  N  K  I  L  L  H   </second_frame>
            <third_frame>   S  G  A  L  H  V  I  *  A  K  W  T  V  Y  V  I  P  *  K  R  P  S  Y  V  F  L  M  D  I  T  V  L  I  S  R  F  I  K :   R  V  K  L  F  Y  Y  *  T  K  L  Q  P  L  R  R  A  L  E  M  L  S  *  *  F  Y  K  L  V  T  F  H  L  Y  L  F  Q  D  L  P  P  P  I  L  G  S  F  T  N  F  R :   I  L  L  Y  T  C  N  W  R  V  K  R  F  E  A  F  L  I  L  W  S  L  P  W  Q  L  V  :  H  Q  E  V  *  L  V  F  L  L  Q  E  S  V  L  W  F  T  S  W  T  K  M  K  M  K  F  L  I  Q  S  D  S  T  L  L  F  A  G  S  F  A  G  S  I  N  F  G  Q  I  S  Q  C  L  S  L  F  T  K  L  *  T  L  C  T  L  L  V  N  S  Y  *  L  D  D  V  K  A  E  E  S  T  K  F  Y  F  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0329G05.3" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="69368" stop="69481"/>
                    <exon start="69575" stop="69727"/>
                    <exon start="69949" stop="70030"/>
                    <exon start="70480" stop="70574"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>441</number_coding_nucleotides>
                  <number_encoded_amino_acids>147</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VRGLARDLSKVDSIRDPIEAALLCIPDGYHCIDLSLYKEGQIVLLLNETATTSESSGNAFMMILQAGDLSFVSLSRSTAPNSWKLHELQDSAIYLQLESEKVRSIPHSVVSPLAVSASRGVACVFAARKRALVYILDEDEDEVSDTE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="-" PGL_start="78117" PGL_stop="71009"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="78117" e_stop="77751"/>
            <exon e_start="76627" e_stop="76552"/>
            <exon e_start="75706" e_stop="75648"/>
            <exon e_start="74767" e_stop="74274"/>
            <exon e_start="74187" e_stop="74027"/>
            <exon e_start="73931" e_stop="73728"/>
            <exon e_start="72920" e_stop="72683"/>
            <exon e_start="72084" e_stop="71009"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.931" e_score="1.000"/>
          <exon-intron don_prob="0.710" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.951" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.964" e_score="1.000"/>
          <exon-intron don_prob="0.854" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.928" e_score="1.000"/>
          <exon-intron don_prob="0.968" acc_prob="0.994" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="78117" e_stop="77751" e_length="367"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.931">
            <gDNA_intron_boundary i_start="77750" i_stop="76628" i_length="1123"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="76627" e_stop="76552" e_length="76"/>
          </exon>
          <intron i_serial="2" don_prob="0.710" acc_prob="1.000">
            <gDNA_intron_boundary i_start="76551" i_stop="75707" i_length="845"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="75706" e_stop="75648" e_length="59"/>
          </exon>
          <intron i_serial="3" don_prob="0.951" acc_prob="0.999">
            <gDNA_intron_boundary i_start="75647" i_stop="74768" i_length="880"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="74767" e_stop="74274" e_length="494"/>
          </exon>
          <intron i_serial="4" don_prob="0.996" acc_prob="0.964">
            <gDNA_intron_boundary i_start="74273" i_stop="74188" i_length="86"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="74187" e_stop="74027" e_length="161"/>
          </exon>
          <intron i_serial="5" don_prob="0.854" acc_prob="1.000">
            <gDNA_intron_boundary i_start="74026" i_stop="73932" i_length="95"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="73931" e_stop="73728" e_length="204"/>
          </exon>
          <intron i_serial="6" don_prob="1.000" acc_prob="0.928">
            <gDNA_intron_boundary i_start="73727" i_stop="72921" i_length="807"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="72920" e_stop="72683" e_length="238"/>
          </exon>
          <intron i_serial="7" don_prob="0.968" acc_prob="0.994">
            <gDNA_intron_boundary i_start="72682" i_stop="72085" i_length="598"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="72084" e_stop="71009" e_length="1076"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="78117" stop="77751"/>
              <exon start="76627" stop="76552"/>
              <exon start="75706" stop="75648"/>
              <exon start="74767" stop="74524"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U594996" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="78094" stop="77751"/>
              <exon start="76627" stop="76552"/>
              <exon start="75706" stop="75648"/>
              <exon start="74767" stop="74274"/>
              <exon start="74187" stop="74027"/>
              <exon start="73931" stop="73728"/>
              <exon start="72920" stop="72683"/>
              <exon start="72084" stop="71009"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U583537" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAGGAAGCCATCAAAATAGAAACATTCATAGAATGATAGTTCCATGAACTTTCCGAGAAACATCTCTTCATCTTCTTTCTTCTTTCAATTTTTTTCCCGCTTTCCCCTTTTTTCGCTCCTTTTTCTCACTTTCTTCTATCCACTGAGAAAAAAAGAAGAAAATTTTGAGTCTCACTATACGAAACAGACTGTTGAATAATCAAACAAAGAAAAAAGAAAGAAACTTTAGATCAGATCTGAAAATTTGAACAAGAGGAGTGTTTTAATAGTCAAAGAAAATGCAGACAAGGTATATGGAGAAACGTGTTTTGGATCCAAGTAGTAGTGAGGAAGGTCAACCTGATAGGAAAAGACCTGCTCTTGCAAG : TGTCATTGTTGAAGCGCTAAAGGTGGACAGTCTGCAAAAACTCTGCTCATCACTGGAGCCAATTCTTCGAAGAGTT : GTTAGTGAAGAAGTGGAGCGTGCTTTGGCTAAACTTGGACCTGCTAAACTTAATGCAAG : GGTTTCGCCAAAAAGAATTGAAGGACCTGATGGGAGAAATTTGCAGCTTCAGTTTCGGTCCAAACTGTCACTACCTCTCTTCACTGGAGGAAAAGTAGAAGGAGAGCAGGGTTCCGCAATACATATTGTCTTGATTGATGGAAATACAAACCATGTTGTAACATCAGGTCCCGAGTCCTTGGTTAAGTTAGATGTTGTTGTGCTTGAAGGAGATTTTAACAATGAGGATGATGATGGCTGGACTCAAGAAGAATTTGAGTCTCATATCGTCAAGGAGCGTGAAGGCAAGAGGCCTCTCCTTACTGGAGAATTGCAAGTGATATTGAAGGAAGGTGTTGGCACCCTTGGCGAGTTGACATTTACTGACAACTCCAGCTGGATCAGAAGCAGAAAGTTCAGGCTAGGCTTAAAGGTGGCATCAGGTTGCTGTGAGGGAATCCGCATTCGTGAGGCAAAAACAGATGCCTTCACTGTCAAGGATCATAGAGGAGAAT : TGTACAAGAAACATTATCCACCTGCATTAGATGATGAAGTTTGGAGATTGGAAAAGATAGGGAAAGATGGATCCTTCCACAAGAGGCTAAATAAAGCTGGCATACATAAAGTGGAAGACTTTCTGCGTCTTGTTGTGAGAGACTCGCAGAGGCTCCGAAAT : GTCCTGGGAAGTGGAATGTCAAATAAAATGTGGGATGCTCTTCTGGACCATGCAAAAACCTGTGTACTAAGTGGGAAGCTATATGTCTACTATCCTGATGATATGAGAAATGTCGGTGTTGTTTTTAATAATATCTATGAATTATGTGGTTTAATCTCTGGCGGACAGTATCATTCAATGGATTCTCTTTCAGACAATCAGAAG : ATATATGTGGATACTTTAGTTAAGAAGGCGTATGACAACTGGATGCAAGTTGTTGAGTATGATGGAAAATCTCTCCTAAGCCTGGGCCAGAATAAAGCCGCAGTTTCGTCTCAAAATGATCCTACAATTGGCTCTCAGAACCATACAATCTCTTTTGATCAACAAACTAATCTACCAAGTCTTCCAGCTTCAATATCATCAGAGCAGCCTTCTATGAATTCAGGACTGAACATGGGAG : GGTATAATGATAGCCTCAGTGGCAGATACACTATGCAGCCTCAGAACATGAATCTAAATGGCAACATGCAGTTAAATGGTGCTTCGTTTCCTCAGAACCATTTGCTCGGCACGTCACAACAAGCTCAGCCGCATGGGAGTGATAGCATGCTGGCCCTTCGCCCACCACAGCCATCAATGTCTAGCTATTTTGCTGCTAGCACGCCTAATCCTTATAAGGGAGCTGAGGACTTCTTAACAGAGGAAGAGATACGTATGAAAAGTCATGAGATGCTCGAAAATGAAGACATGCAACATTTGCTACGTATGTTCAGCATGGGACAGGGTCATGCGTCTTCTAGTGTTGCAGAAGAGAATTACCAGTATGGATCAGCATACATGCCCAGCATGTCTTCTAATTTTGGTTTTGATGAGGAACGTACACGTTCTTCAGGTAAGGCTGTTGTAGGGTGGCTCAAACTCAAAGCTGCCTTGAGATGGGGCATTTTCATAAGGAAGAAAGCTGCAGAAAGAAGAGCACAAATTACTGAACTGGATGACTCTTAGATTTGATTTTCCCCTTAGCAACCACTTGGATATGATGTGTAAGGGCTTTCCTCTAAGAAGCATATTATCGATCTTGGAATTTGGTTTGACAATCCATATGCATCTGGTGCTGGGTTGGGCTCAATCTGAACCTAGGAGCCTCTTATAATGTACAGTTATGCCTGTCCATGGAGATTGCTCTCTCTCCATTAACAGAATAACATAAGCTTATGATAGTTCTCTCAGCATATTATATGCAGTTCAAAGACTGGAGCAGTTTTCATGGCTCTAGCTGAAGGGAAATTCCCATGGTTTAGACCTGATTTCTTCTACTAGGGACTGAAGGAAGTGACTTCATTTGCCTTGTGCTAACTCAAGATTGTAGCAAGTATGTTTTGATGAGTTATGTTTGACTGATGCTGTAATTTTTAGTGTTTTGTTGTAATGAGTTTATCAAAAGAAAACATAATATTTGTCTCATAGAAACATTTGTTGTGAACATATCATTAAAATGTGATGTGGTAAACCTTCAAAAATTTGTTATATTGAACG</gDNA_template>
            <first_frame> E  E  A  I  K  I  E  T  F  I  E  *  *  F  H  E  L  S  E  K  H  L  F  I  F  F  L  L  S  I  F  F  P  L  S  P  F  F  A  P  F  S  H  F  L  L  S  T  E  K  K  R  R  K  F  *  V  S  L  Y  E  T  D  C  *  I  I  K  Q  R  K  K  K  E  T  L  D  Q  I  *  K  F  E  Q  E  E  C  F  N  S  Q  R  K  C  R  Q  G  I  W  R  N  V  F  W  I  Q  V  V  V  R  K  V  N  L  I  G  K  D  L  L  L  Q   : V  S  L  L  K  R  *  R  W  T  V  C  K  N  S  A  H  H  W  S  Q  F  F  E  E  L :   L  V  K  K  W  S  V  L  W  L  N  L  D  L  L  N  L  M  Q   : G  F  R  Q  K  E  L  K  D  L  M  G  E  I  C  S  F  S  F  G  P  N  C  H  Y  L  S  S  L  E  E  K  *  K  E  S  R  V  P  Q  Y  I  L  S  *  L  M  E  I  Q  T  M  L  *  H  Q  V  P  S  P  W  L  S  *  M  L  L  C  L  K  E  I  L  T  M  R  M  M  M  A  G  L  K  K  N  L  S  L  I  S  S  R  S  V  K  A  R  G  L  S  L  L  E  N  C  K  *  Y  *  R  K  V  L  A  P  L  A  S  *  H  L  L  T  T  P  A  G  S  E  A  E  S  S  G  *  A  *  R  W  H  Q  V  A  V  R  E  S  A  F  V  R  Q  K  Q  M  P  S  L  S  R  I  I  E  E  N  :  C  T  R  N  I  I  H  L  H  *  M  M  K  F  G  D  W  K  R  *  G  K  M  D  P  S  T  R  G  *  I  K  L  A  Y  I  K  W  K  T  F  C  V  L  L  *  E  T  R  R  G  S  E  M :   S  W  E  V  E  C  Q  I  K  C  G  M  L  F  W  T  M  Q  K  P  V  Y  *  V  G  S  Y  M  S  T  I  L  M  I  *  E  M  S  V  L  F  L  I  I  S  M  N  Y  V  V  *  S  L  A  D  S  I  I  Q  W  I  L  F  Q  T  I  R  R :   Y  M  W  I  L  *  L  R  R  R  M  T  T  G  C  K  L  L  S  M  M  E  N  L  S  *  A  W  A  R  I  K  P  Q  F  R  L  K  M  I  L  Q  L  A  L  R  T  I  Q  S  L  L  I  N  K  L  I  Y  Q  V  F  Q  L  Q  Y  H  Q  S  S  L  L  *  I  Q  D  *  T  W  E  :  G  I  M  I  A  S  V  A  D  T  L  C  S  L  R  T  *  I  *  M  A  T  C  S  *  M  V  L  R  F  L  R  T  I  C  S  A  R  H  N  K  L  S  R  M  G  V  I  A  C  W  P  F  A  H  H  S  H  Q  C  L  A  I  L  L  L  A  R  L  I  L  I  R  E  L  R  T  S  *  Q  R  K  R  Y  V  *  K  V  M  R  C  S  K  M  K  T  C  N  I  C  Y  V  C  S  A  W  D  R  V  M  R  L  L  V  L  Q  K  R  I  T  S  M  D  Q  H  T  C  P  A  C  L  L  I  L  V  L  M  R  N  V  H  V  L  Q  V  R  L  L  *  G  G  S  N  S  K  L  P  *  D  G  A  F  S  *  G  R  K  L  Q  K  E  E  H  K  L  L  N  W  M  T  L  R  F  D  F  P  L  S  N  H  L  D  M  M  C  K  G  F  P  L  R  S  I  L  S  I  L  E  F  G  L  T  I  H  M  H  L  V  L  G  W  A  Q  S  E  P  R  S  L  L  *  C  T  V  M  P  V  H  G  D  C  S  L  S  I  N  R  I  T  *  A  Y  D  S  S  L  S  I  L  Y  A  V  Q  R  L  E  Q  F  S  W  L  *  L  K  G  N  S  H  G  L  D  L  I  S  S  T  R  D  *  R  K  *  L  H  L  P  C  A  N  S  R  L  *  Q  V  C  F  D  E  L  C  L  T  D  A  V  I  F  S  V  L  L  *  *  V  Y  Q  K  K  T  *  Y  L  S  H  R  N  I  C  C  E  H  I  I  K  M  *  C  G  K  P  S  K  I  C  Y  I  E   </first_frame>
            <second_frame>  R  K  P  S  K  *  K  H  S  *  N  D  S  S  M  N  F  P  R  N  I  S  S  S  S  F  F  F  Q  F  F  S  R  F  P  L  F  S  L  L  F  L  T  F  F  Y  P  L  R  K  K  E  E  N  F  E  S  H  Y  T  K  Q  T  V  E  *  S  N  K  E  K  R  K  K  L  *  I  R  S  E  N  L  N  K  R  S  V  L  I  V  K  E  N  A  D  K  V  Y  G  E  T  C  F  G  S  K  *  *  *  G  R  S  T  *  *  E  K  T  C  S  C  K  :  C  H  C  *  S  A  K  G  G  Q  S  A  K  T  L  L  I  T  G  A  N  S  S  K  S   : C  *  *  R  S  G  A  C  F  G  *  T  W  T  C  *  T  *  C  K  :  G  F  A  K  K  N  *  R  T  *  W  E  K  F  A  A  S  V  S  V  Q  T  V  T  T  S  L  H  W  R  K  S  R  R  R  A  G  F  R  N  T  Y  C  L  D  *  W  K  Y  K  P  C  C  N  I  R  S  R  V  L  G  *  V  R  C  C  C  A  *  R  R  F  *  Q  *  G  *  *  W  L  D  S  R  R  I  *  V  S  Y  R  Q  G  A  *  R  Q  E  A  S  P  Y  W  R  I  A  S  D  I  E  G  R  C  W  H  P  W  R  V  D  I  Y  *  Q  L  Q  L  D  Q  K  Q  K  V  Q  A  R  L  K  G  G  I  R  L  L  *  G  N  P  H  S  *  G  K  N  R  C  L  H  C  Q  G  S  *  R  R  I :   V  Q  E  T  L  S  T  C  I  R  *  *  S  L  E  I  G  K  D  R  E  R  W  I  L  P  Q  E  A  K  *  S  W  H  T  *  S  G  R  L  S  A  S  C  C  E  R  L  A  E  A  P  K   : C  P  G  K  W  N  V  K  *  N  V  G  C  S  S  G  P  C  K  N  L  C  T  K  W  E  A  I  C  L  L  S  *  *  Y  E  K  C  R  C  C  F  *  *  Y  L  *  I  M  W  F  N  L  W  R  T  V  S  F  N  G  F  S  F  R  Q  S  E   : D  I  C  G  Y  F  S  *  E  G  V  *  Q  L  D  A  S  C  *  V  *  W  K  I  S  P  K  P  G  P  E  *  S  R  S  F  V  S  K  *  S  Y  N  W  L  S  E  P  Y  N  L  F  *  S  T  N  *  S  T  K  S  S  S  F  N  I  I  R  A  A  F  Y  E  F  R  T  E  H  G  R :   V  *  *  *  P  Q  W  Q  I  H  Y  A  A  S  E  H  E  S  K  W  Q  H  A  V  K  W  C  F  V  S  S  E  P  F  A  R  H  V  T  T  S  S  A  A  W  E  *  *  H  A  G  P  S  P  T  T  A  I  N  V  *  L  F  C  C  *  H  A  *  S  L  *  G  S  *  G  L  L  N  R  G  R  D  T  Y  E  K  S  *  D  A  R  K  *  R  H  A  T  F  A  T  Y  V  Q  H  G  T  G  S  C  V  F  *  C  C  R  R  E  L  P  V  W  I  S  I  H  A  Q  H  V  F  *  F  W  F  *  *  G  T  Y  T  F  F  R  *  G  C  C  R  V  A  Q  T  Q  S  C  L  E  M  G  H  F  H  K  E  E  S  C  R  K  K  S  T  N  Y  *  T  G  *  L  L  D  L  I  F  P  L  A  T  T  W  I  *  C  V  R  A  F  L  *  E  A  Y  Y  R  S  W  N  L  V  *  Q  S  I  C  I  W  C  W  V  G  L  N  L  N  L  G  A  S  Y  N  V  Q  L  C  L  S  M  E  I  A  L  S  P  L  T  E  *  H  K  L  M  I  V  L  S  A  Y  Y  M  Q  F  K  D  W  S  S  F  H  G  S  S  *  R  E  I  P  M  V  *  T  *  F  L  L  L  G  T  E  G  S  D  F  I  C  L  V  L  T  Q  D  C  S  K  Y  V  L  M  S  Y  V  *  L  M  L  *  F  L  V  F  C  C  N  E  F  I  K  R  K  H  N  I  C  L  I  E  T  F  V  V  N  I  S  L  K  C  D  V  V  N  L  Q  K  F  V  I  L  N  </second_frame>
            <third_frame>   G  S  H  Q  N  R  N  I  H  R  M  I  V  P  *  T  F  R  E  T  S  L  H  L  L  S  S  F  N  F  F  P  A  F  P  F  F  R  S  F  F  S  L  S  S  I  H  *  E  K  K  K  K  I  L  S  L  T  I  R  N  R  L  L  N  N  Q  T  K  K  K  E  R  N  F  R  S  D  L  K  I  *  T  R  G  V  F  *  *  S  K  K  M  Q  T  R  Y  M  E  K  R  V  L  D  P  S  S  S  E  E  G  Q  P  D  R  K  R  P  A  L  A  S :   V  I  V  E  A  L  K  V  D  S  L  Q  K  L  C  S  S  L  E  P  I  L  R  R  V  :  V  S  E  E  V  E  R  A  L  A  K  L  G  P  A  K  L  N  A  R :   V  S  P  K  R  I  E  G  P  D  G  R  N  L  Q  L  Q  F  R  S  K  L  S  L  P  L  F  T  G  G  K  V  E  G  E  Q  G  S  A  I  H  I  V  L  I  D  G  N  T  N  H  V  V  T  S  G  P  E  S  L  V  K  L  D  V  V  V  L  E  G  D  F  N  N  E  D  D  D  G  W  T  Q  E  E  F  E  S  H  I  V  K  E  R  E  G  K  R  P  L  L  T  G  E  L  Q  V  I  L  K  E  G  V  G  T  L  G  E  L  T  F  T  D  N  S  S  W  I  R  S  R  K  F  R  L  G  L  K  V  A  S  G  C  C  E  G  I  R  I  R  E  A  K  T  D  A  F  T  V  K  D  H  R  G  E   : L  Y  K  K  H  Y  P  P  A  L  D  D  E  V  W  R  L  E  K  I  G  K  D  G  S  F  H  K  R  L  N  K  A  G  I  H  K  V  E  D  F  L  R  L  V  V  R  D  S  Q  R  L  R  N  :  V  L  G  S  G  M  S  N  K  M  W  D  A  L  L  D  H  A  K  T  C  V  L  S  G  K  L  Y  V  Y  Y  P  D  D  M  R  N  V  G  V  V  F  N  N  I  Y  E  L  C  G  L  I  S  G  G  Q  Y  H  S  M  D  S  L  S  D  N  Q  K  :  I  Y  V  D  T  L  V  K  K  A  Y  D  N  W  M  Q  V  V  E  Y  D  G  K  S  L  L  S  L  G  Q  N  K  A  A  V  S  S  Q  N  D  P  T  I  G  S  Q  N  H  T  I  S  F  D  Q  Q  T  N  L  P  S  L  P  A  S  I  S  S  E  Q  P  S  M  N  S  G  L  N  M  G   : G  Y  N  D  S  L  S  G  R  Y  T  M  Q  P  Q  N  M  N  L  N  G  N  M  Q  L  N  G  A  S  F  P  Q  N  H  L  L  G  T  S  Q  Q  A  Q  P  H  G  S  D  S  M  L  A  L  R  P  P  Q  P  S  M  S  S  Y  F  A  A  S  T  P  N  P  Y  K  G  A  E  D  F  L  T  E  E  E  I  R  M  K  S  H  E  M  L  E  N  E  D  M  Q  H  L  L  R  M  F  S  M  G  Q  G  H  A  S  S  S  V  A  E  E  N  Y  Q  Y  G  S  A  Y  M  P  S  M  S  S  N  F  G  F  D  E  E  R  T  R  S  S  G  K  A  V  V  G  W  L  K  L  K  A  A  L  R  W  G  I  F  I  R  K  K  A  A  E  R  R  A  Q  I  T  E  L  D  D  S  *  I  *  F  S  P  *  Q  P  L  G  Y  D  V  *  G  L  S  S  K  K  H  I  I  D  L  G  I  W  F  D  N  P  Y  A  S  G  A  G  L  G  S  I  *  T  *  E  P  L  I  M  Y  S  Y  A  C  P  W  R  L  L  S  L  H  *  Q  N  N  I  S  L  *  *  F  S  Q  H  I  I  C  S  S  K  T  G  A  V  F  M  A  L  A  E  G  K  F  P  W  F  R  P  D  F  F  Y  *  G  L  K  E  V  T  S  F  A  L  C  *  L  K  I  V  A  S  M  F  *  *  V  M  F  D  *  C  C  N  F  *  C  F  V  V  M  S  L  S  K  E  N  I  I  F  V  S  *  K  H  L  L  *  T  Y  H  *  N  V  M  W  *  T  F  K  N  L  L  Y  *  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0329G05.3" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="77848" stop="77751"/>
                    <exon start="76627" stop="76552"/>
                    <exon start="75706" stop="75648"/>
                    <exon start="74767" stop="74274"/>
                    <exon start="74187" stop="74027"/>
                    <exon start="73931" stop="73728"/>
                    <exon start="72920" stop="72683"/>
                    <exon start="72084" stop="71540"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1872</number_coding_nucleotides>
                  <number_encoded_amino_acids>624</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SKKMQTRYMEKRVLDPSSSEEGQPDRKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPAKLNARVSPKRIEGPDGRNLQLQFRSKLSLPLFTGGKVEGEQGSAIHIVLIDGNTNHVVTSGPESLVKLDVVVLEGDFNNEDDDGWTQEEFESHIVKEREGKRPLLTGELQVILKEGVGTLGELTFTDNSSWIRSRKFRLGLKVASGCCEGIRIREAKTDAFTVKDHRGELYKKHYPPALDDEVWRLEKIGKDGSFHKRLNKAGIHKVEDFLRLVVRDSQRLRNVLGSGMSNKMWDALLDHAKTCVLSGKLYVYYPDDMRNVGVVFNNIYELCGLISGGQYHSMDSLSDNQKIYVDTLVKKAYDNWMQVVEYDGKSLLSLGQNKAAVSSQNDPTIGSQNHTISFDQQTNLPSLPASISSEQPSMNSGLNMGGYNDSLSGRYTMQPQNMNLNGNMQLNGASFPQNHLLGTSQQAQPHGSDSMLALRPPQPSMSSYFAASTPNPYKGAEDFLTEEEIRMKSHEMLENEDMQHLLRMFSMGQGHASSSVAEENYQYGSAYMPSMSSNFGFDEERTRSSGKAVVGWLKLKAALRWGIFIRKKAAERRAQITELDDS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="78006" e_stop="77751"/>
            <exon e_start="75706" e_stop="75648"/>
            <exon e_start="74767" e_stop="74395"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.951" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="78006" e_stop="77751" e_length="256"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="77750" i_stop="75707" i_length="2044"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="75706" e_stop="75648" e_length="59"/>
          </exon>
          <intron i_serial="2" don_prob="0.951" acc_prob="0.999">
            <gDNA_intron_boundary i_start="75647" i_stop="74768" i_length="880"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="74767" e_stop="74395" e_length="373"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="78006" stop="77751"/>
              <exon start="75706" stop="75648"/>
              <exon start="74767" stop="74395"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U583540" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTCGCTCCTTTTTCTCACTTTCTTCTATCCACTGAGAAAAAAAGAAGAAAATTTTGAGTCTCACTATACGAAACAGACTGTTGAATAATCAAACAAAGAAAAAAGAAAGAAACTTTAGATCAGATCTGAAAATTTGAACAAGAGGAGTGTTTTAATAGTCAAAGAAAATGCAGACAAGGTATATGGAGAAACGTGTTTTGGATCCAAGTAGTAGTGAGGAAGGTCAACCTGATAGGAAAAGACCTGCTCTTGCAAG : GTTAGTGAAGAAGTGGAGCGTGCTTTGGCTAAACTTGGACCTGCTAAACTTAATGCAAG : GGTTTCGCCAAAAAGAATTGAAGGACCTGATGGGAGAAATTTGCAGCTTCAGTTTCGGTCCAAACTGTCACTACCTCTCTTCACTGGAGGAAAAGTAGAAGGAGAGCAGGGTTCCGCAATACATATTGTCTTGATTGATGGAAATACAAACCATGTTGTAACATCAGGTCCCGAGTCCTTGGTTAAGTTAGATGTTGTTGTGCTTGAAGGAGATTTTAACAATGAGGATGATGATGGCTGGACTCAAGAAGAATTTGAGTCTCATATCGTCAAGGAGCGTGAAGGCAAGAGGCCTCTCCTTACTGGAGAATTGCAAGTGATATTGAAGGAAGGTGTTGGCACCCTTGGCGAGTTGACATTTACTGACAACTCC</gDNA_template>
            <first_frame> F  A  P  F  S  H  F  L  L  S  T  E  K  K  R  R  K  F  *  V  S  L  Y  E  T  D  C  *  I  I  K  Q  R  K  K  K  E  T  L  D  Q  I  *  K  F  E  Q  E  E  C  F  N  S  Q  R  K  C  R  Q  G  I  W  R  N  V  F  W  I  Q  V  V  V  R  K  V  N  L  I  G  K  D  L  L  L  Q   : G  *  *  R  S  G  A  C  F  G  *  T  W  T  C  *  T  *  C  K  :  G  F  A  K  K  N  *  R  T  *  W  E  K  F  A  A  S  V  S  V  Q  T  V  T  T  S  L  H  W  R  K  S  R  R  R  A  G  F  R  N  T  Y  C  L  D  *  W  K  Y  K  P  C  C  N  I  R  S  R  V  L  G  *  V  R  C  C  C  A  *  R  R  F  *  Q  *  G  *  *  W  L  D  S  R  R  I  *  V  S  Y  R  Q  G  A  *  R  Q  E  A  S  P  Y  W  R  I  A  S  D  I  E  G  R  C  W  H  P  W  R  V  D  I  Y  *  Q  L  </first_frame>
            <second_frame>  S  L  L  F  L  T  F  F  Y  P  L  R  K  K  E  E  N  F  E  S  H  Y  T  K  Q  T  V  E  *  S  N  K  E  K  R  K  K  L  *  I  R  S  E  N  L  N  K  R  S  V  L  I  V  K  E  N  A  D  K  V  Y  G  E  T  C  F  G  S  K  *  *  *  G  R  S  T  *  *  E  K  T  C  S  C  K  :  V  S  E  E  V  E  R  A  L  A  K  L  G  P  A  K  L  N  A  R :   V  S  P  K  R  I  E  G  P  D  G  R  N  L  Q  L  Q  F  R  S  K  L  S  L  P  L  F  T  G  G  K  V  E  G  E  Q  G  S  A  I  H  I  V  L  I  D  G  N  T  N  H  V  V  T  S  G  P  E  S  L  V  K  L  D  V  V  V  L  E  G  D  F  N  N  E  D  D  D  G  W  T  Q  E  E  F  E  S  H  I  V  K  E  R  E  G  K  R  P  L  L  T  G  E  L  Q  V  I  L  K  E  G  V  G  T  L  G  E  L  T  F  T  D  N  S </second_frame>
            <third_frame>   R  S  F  F  S  L  S  S  I  H  *  E  K  K  K  K  I  L  S  L  T  I  R  N  R  L  L  N  N  Q  T  K  K  K  E  R  N  F  R  S  D  L  K  I  *  T  R  G  V  F  *  *  S  K  K  M  Q  T  R  Y  M  E  K  R  V  L  D  P  S  S  S  E  E  G  Q  P  D  R  K  R  P  A  L  A  R :   L  V  K  K  W  S  V  L  W  L  N  L  D  L  L  N  L  M  Q   : G  F  R  Q  K  E  L  K  D  L  M  G  E  I  C  S  F  S  F  G  P  N  C  H  Y  L  S  S  L  E  E  K  *  K  E  S  R  V  P  Q  Y  I  L  S  *  L  M  E  I  Q  T  M  L  *  H  Q  V  P  S  P  W  L  S  *  M  L  L  C  L  K  E  I  L  T  M  R  M  M  M  A  G  L  K  K  N  L  S  L  I  S  S  R  S  V  K  A  R  G  L  S  L  L  E  N  C  K  *  Y  *  R  K  V  L  A  P  L  A  S  *  H  L  L  T  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0329G05.3" strand="-"/>
                <serials PGL_serial="7" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="77771" stop="77751"/>
                    <exon start="75706" stop="75648"/>
                    <exon start="74767" stop="74395"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>453</number_coding_nucleotides>
                  <number_encoded_amino_acids>151</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EKTCSCKVSEEVERALAKLGPAKLNARVSPKRIEGPDGRNLQLQFRSKLSLPLFTGGKVEGEQGSAIHIVLIDGNTNHVVTSGPESLVKLDVVVLEGDFNNEDDDGWTQEEFESHIVKEREGKRPLLTGELQVILKEGVGTLGELTFTDNS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="82988" PGL_stop="85869"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="82988" e_stop="83077"/>
            <exon e_start="83174" e_stop="83274"/>
            <exon e_start="84135" e_stop="84207"/>
            <exon e_start="84634" e_stop="84720"/>
            <exon e_start="84834" e_stop="84911"/>
            <exon e_start="85042" e_stop="85112"/>
            <exon e_start="85637" e_stop="85869"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.985" acc_prob="0.707" e_score="0.989"/>
          <exon-intron don_prob="0.999" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.984" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.972" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.810" acc_prob="0.849" e_score="1.000"/>
          <exon-only e_score="0.966"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.989">
            <gDNA_exon_boundary e_start="82988" e_stop="83077" e_length="90"/>
          </exon>
          <intron i_serial="1" don_prob="0.985" acc_prob="0.707">
            <gDNA_intron_boundary i_start="83078" i_stop="83173" i_length="96"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="83174" e_stop="83274" e_length="101"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.989">
            <gDNA_intron_boundary i_start="83275" i_stop="84134" i_length="860"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="84135" e_stop="84207" e_length="73"/>
          </exon>
          <intron i_serial="3" don_prob="0.984" acc_prob="1.000">
            <gDNA_intron_boundary i_start="84208" i_stop="84633" i_length="426"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="84634" e_stop="84720" e_length="87"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="0.995">
            <gDNA_intron_boundary i_start="84721" i_stop="84833" i_length="113"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="84834" e_stop="84911" e_length="78"/>
          </exon>
          <intron i_serial="5" don_prob="0.972" acc_prob="0.992">
            <gDNA_intron_boundary i_start="84912" i_stop="85041" i_length="130"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="85042" e_stop="85112" e_length="71"/>
          </exon>
          <intron i_serial="6" don_prob="0.810" acc_prob="0.849">
            <gDNA_intron_boundary i_start="85113" i_stop="85636" i_length="524"/>
          </intron>
          <exon e_serial="7" e_score="0.966">
            <gDNA_exon_boundary e_start="85637" e_stop="85869" e_length="233"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82988" stop="83077"/>
              <exon start="83174" stop="83274"/>
              <exon start="84135" stop="84207"/>
              <exon start="84634" stop="84720"/>
              <exon start="84834" stop="84911"/>
              <exon start="85042" stop="85112"/>
              <exon start="85637" stop="85869"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U599305" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CATATGGAGGAAGCCGATCTGCACCCAAAGTATTTAGTGACGATGTAAAGCCCCTGCTAGAGGATGCAAATATTCACTATACACTGCAAG : AAACTAAATATCGGTTACATGCAAAGGAAGTTGCTCATTCGTTGGATCTTTTGCGATATGATGGAGTTCTTTGTGTCAGTGGTGATGGAATTTTGGTTGAG : GTAGTGAATGGACTGCTTGAAAGGGAGGATTGGAGTACTGCAATAAAGATGCCTCTTGGAGTAATACCCGCAG : GAACTTCAAATGGGATGGCCAAGTCTCTTCTAGATTCTGTTGGTGAATCTTGTACTGCATTTAATGCAACTCTTGCTATAATCAGAG : GCCACAAGAGATCACTAGATGTAGCTACAGTTTTACAGGGGCAGAAAAAATATTTCAGTGTGCTGATGCTTGCCTGGG : GTCTTATAGCTGATATAGATATAGAGTCTGAGAAGTATAGGTGGATGGGTAGTGCTCGAATGGATTTTTAT : GCAATACAGCGGATATTTTGTCTTAGAAAGTATCATGGCTGTATCAAATTTGTGGCTGCACCAGGGTTTTGAAAATTTTGGAGAACCAAATGAACTTGGAGGTGAAATTGATGAGCTTAACTCGAATTTGGTTATGCAAGATGGCTATTGTGGTCCCACTTTTGACATGAAGGGTTTCAACCGCAAGATTGAGGGGCCTTTTGTCTCAATCTGGCTTCATAATGTACCTTGGG</gDNA_template>
            <first_frame> H  M  E  E  A  D  L  H  P  K  Y  L  V  T  M  *  S  P  C  *  R  M  Q  I  F  T  I  H  C  K  :  K  L  N  I  G  Y  M  Q  R  K  L  L  I  R  W  I  F  C  D  M  M  E  F  F  V  S  V  V  M  E  F  W  L  R :   *  *  M  D  C  L  K  G  R  I  G  V  L  Q  *  R  C  L  L  E  *  Y  P  Q  :  E  L  Q  M  G  W  P  S  L  F  *  I  L  L  V  N  L  V  L  H  L  M  Q  L  L  L  *  S  E  :  A  T  R  D  H  *  M  *  L  Q  F  Y  R  G  R  K  N  I  S  V  C  *  C  L  P  G  :  V  L  *  L  I  *  I  *  S  L  R  S  I  G  G  W  V  V  L  E  W  I  F  M :   Q  Y  S  G  Y  F  V  L  E  S  I  M  A  V  S  N  L  W  L  H  Q  G  F  E  N  F  G  E  P  N  E  L  G  G  E  I  D  E  L  N  S  N  L  V  M  Q  D  G  Y  C  G  P  T  F  D  M  K  G  F  N  R  K  I  E  G  P  F  V  S  I  W  L  H  N  V  P  W  </first_frame>
            <second_frame>  I  W  R  K  P  I  C  T  Q  S  I  *  *  R  C  K  A  P  A  R  G  C  K  Y  S  L  Y  T  A  R :   N  *  I  S  V  T  C  K  G  S  C  S  F  V  G  S  F  A  I  *  W  S  S  L  C  Q  W  *  W  N  F  G  *   : G  S  E  W  T  A  *  K  G  G  L  E  Y  C  N  K  D  A  S  W  S  N  T  R  R :   N  F  K  W  D  G  Q  V  S  S  R  F  C  W  *  I  L  Y  C  I  *  C  N  S  C  Y  N  Q  R :   P  Q  E  I  T  R  C  S  Y  S  F  T  G  A  E  K  I  F  Q  C  A  D  A  C  L  G :   S  Y  S  *  Y  R  Y  R  V  *  E  V  *  V  D  G  *  C  S  N  G  F  L   : C  N  T  A  D  I  L  S  *  K  V  S  W  L  Y  Q  I  C  G  C  T  R  V  L  K  I  L  E  N  Q  M  N  L  E  V  K  L  M  S  L  T  R  I  W  L  C  K  M  A  I  V  V  P  L  L  T  *  R  V  S  T  A  R  L  R  G  L  L  S  Q  S  G  F  I  M  Y  L  G </second_frame>
            <third_frame>   Y  G  G  S  R  S  A  P  K  V  F  S  D  D  V  K  P  L  L  E  D  A  N  I  H  Y  T  L  Q   : E  T  K  Y  R  L  H  A  K  E  V  A  H  S  L  D  L  L  R  Y  D  G  V  L  C  V  S  G  D  G  I  L  V  E  :  V  V  N  G  L  L  E  R  E  D  W  S  T  A  I  K  M  P  L  G  V  I  P  A   : G  T  S  N  G  M  A  K  S  L  L  D  S  V  G  E  S  C  T  A  F  N  A  T  L  A  I  I  R   : G  H  K  R  S  L  D  V  A  T  V  L  Q  G  Q  K  K  Y  F  S  V  L  M  L  A  W   : G  L  I  A  D  I  D  I  E  S  E  K  Y  R  W  M  G  S  A  R  M  D  F  Y  :  A  I  Q  R  I  F  C  L  R  K  Y  H  G  C  I  K  F  V  A  A  P  G  F  *  K  F  W  R  T  K  *  T  W  R  *  N  *  *  A  *  L  E  F  G  Y  A  R  W  L  L  W  S  H  F  *  H  E  G  F  Q  P  Q  D  *  G  A  F  C  L  N  L  A  S  *  C  T  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0329G05.3" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="82990" stop="83077"/>
                    <exon start="83174" stop="83274"/>
                    <exon start="84135" stop="84207"/>
                    <exon start="84634" stop="84720"/>
                    <exon start="84834" stop="84911"/>
                    <exon start="85042" stop="85112"/>
                    <exon start="85637" stop="85708"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>567</number_coding_nucleotides>
                  <number_encoded_amino_acids>189</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YGGSRSAPKVFSDDVKPLLEDANIHYTLQETKYRLHAKEVAHSLDLLRYDGVLCVSGDGILVEVVNGLLEREDWSTAIKMPLGVIPAGTSNGMAKSLLDSVGESCTAFNATLAIIRGHKRSLDVATVLQGQKKYFSVLMLAWGLIADIDIESEKYRWMGSARMDFYAIQRIFCLRKYHGCIKFVAAPGF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="91898" PGL_stop="92155"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="91898" e_stop="92155"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.992">
            <gDNA_exon_boundary e_start="91898" e_stop="92155" e_length="258"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91898" stop="92155"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U602135" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTCTCTCTCTAAAATCTTTCAGTCTCTGCAAATTAAACCCTCTTTTGCTCTCTCTAATGGCTAAAATTTATCAATCACTCCGTCACTTCATTTTCTCTCTCTAGAATTTGTTCATCTCTCTAGGGTTTCAGTTTTCACTTTCCTTTCTTTCGCTATCTCTAACGAGAATTTTCCCTGTTGAACCAAAAAAACTTTTCCTTTTCGTTCCTTTTTTTTTTGTTTGGTTTTATTCACACCGTTTGTAAGTGTTTTTTTTTT</gDNA_template>
            <first_frame> L  S  L  *  N  L  S  V  S  A  N  *  T  L  F  C  S  L  *  W  L  K  F  I  N  H  S  V  T  S  F  S  L  S  R  I  C  S  S  L  *  G  F  S  F  H  F  P  F  F  R  Y  L  *  R  E  F  S  L  L  N  Q  K  N  F  S  F  S  F  L  F  F  L  F  G  F  I  H  T  V  C  K  C  F  F  F </first_frame>
            <second_frame>  S  L  S  K  I  F  Q  S  L  Q  I  K  P  S  F  A  L  S  N  G  *  N  L  S  I  T  P  S  L  H  F  L  S  L  E  F  V  H  L  S  R  V  S  V  F  T  F  L  S  F  A  I  S  N  E  N  F  P  C  *  T  K  K  T  F  P  F  R  S  F  F  F  C  L  V  L  F  T  P  F  V  S  V  F  F   </second_frame>
            <third_frame>   L  S  L  K  S  F  S  L  C  K  L  N  P  L  L  L  S  L  M  A  K  I  Y  Q  S  L  R  H  F  I  F  S  L  *  N  L  F  I  S  L  G  F  Q  F  S  L  S  F  L  S  L  S  L  T  R  I  F  P  V  E  P  K  K  L  F  L  F  V  P  F  F  F  V  W  F  Y  S  H  R  L  *  V  F  F  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0329G05.3"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="100547" PGL_stop="102940"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="100547" e_stop="100617"/>
            <exon e_start="101486" e_stop="101556"/>
            <exon e_start="101684" e_stop="102940"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.944" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.918" acc_prob="0.942" e_score="1.000"/>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="100547" e_stop="100617" e_length="71"/>
          </exon>
          <intron i_serial="1" don_prob="0.944" acc_prob="0.997">
            <gDNA_intron_boundary i_start="100618" i_stop="101485" i_length="868"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="101486" e_stop="101556" e_length="71"/>
          </exon>
          <intron i_serial="2" don_prob="0.918" acc_prob="0.942">
            <gDNA_intron_boundary i_start="101557" i_stop="101683" i_length="127"/>
          </intron>
          <exon e_serial="3" e_score="0.999">
            <gDNA_exon_boundary e_start="101684" e_stop="102940" e_length="1257"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100547" stop="100617"/>
              <exon start="101486" stop="101556"/>
              <exon start="101684" stop="102940"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U585712" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CGAAAAGTTCCTGACAATGTTGACCTTCCATCGAGATGGACTTGTTCAGACAACTCATGCGACCCCGAGAG : GTCTGTGTGCTCAGCAGTTCAAGAATTAACAGCAGATCATCTGAGGGACCTACTACCTCATATTAATAAAG : CTTCCAAGAAAAGGAAGGCTTCTAAACAGGAAATGGACTTGGTTGAAACTCTGGATGGGCTTGATGCCCTTGCTCATCTAGCTATCCTAGAAGAGGGAGAGACCCTTCCAGCATCACCACAGGCCACAACTAAGCATCCACGTCATAGACCTGGGTGTACATGCATTGTCTGCATCCAGCCCCCTAGTGGAAAAGGTCCTAAGCACAAGCAATCATGTGATTGTAACGTCTGTAAATCAGTAAAGCGTCGTTTCAAAACATTGATGATGAAGCGTGAAAAAAAGTTATCAGAGAAAGAAGCAGAAGCTACTTGTCAAAAGCTGCAGCCGCAATCAGCTGGGCAATTGCTTGATGCTGATGACATTCAAGAACCTATTGATGATGCAGTGCATTCAAGCCCTCAGCATGAAGAGCTGAACATTGAAGGTTCTGTTGATCCCAATTACCTTAATGAGAAGAAATCTTCTGTTGAGGATCCCAATTACCTTGATGAGAAGAAATCTTCAGTTGATGACACAAATTACCTTAGTGAGAAGATATCTTCTGTTGATGACCCCAGCTACCTTAATGAGAAGGAATCTTCTGTTGATGATCCCAACATCCTGAATGAGAAGAAATCTTCTGTTGATGATCCTAACTGCCTGAATGAGAAGAAATCTGCTGTTGATGATCCCAACTACGTGGATGAGAGGAAATCTTCTGTTGATGATCCCAATTGCCTTAAGGAGAAGAAATCTTCTGCTTCACCATTTAAAGGTGAATTTGACCTGAATGCTAAGCCAGATAGGGACGACGAGCTTTCACCAGGCTCTGATTCTGGTAGCATGATGCGCATGATCAAACGTGCTGCTGAGCAATATGTCAGGCACTGTGATAATGGAAGTTCCGTGGGTAACCAAAGAGATGGAGATGGTGCTGGGGAGACAAATCCGGGTAATTGTGTTATTGTTAGTGGTAGTCATCAAGCTGATGTAGATCATAATAGGCCTTTACCCATAAGCGCTGCTGCATCTTTGGCACCTAATGACCAGTAAGTTGCTCCCTACATGAGGCACCTAAATTAGCTGTGCTATATTAAAAACCAGAGGTACTCCGCAGTGTATGGAAATTTGTACATTTTGGCTTTGCTGGCGTCATGCATTGTACATAGATAGACGTAGCAAGTAGCAACTGATGTAATCTTTCTGCAATCCACAGGTTGCATTTTGCAATGGCCGCGAGGTGCCTTACATATTTATTATATAAATGGCTGGAAAG</gDNA_template>
            <first_frame> R  K  V  P  D  N  V  D  L  P  S  R  W  T  C  S  D  N  S  C  D  P  E  R :   S  V  C  S  A  V  Q  E  L  T  A  D  H  L  R  D  L  L  P  H  I  N  K   : A  S  K  K  R  K  A  S  K  Q  E  M  D  L  V  E  T  L  D  G  L  D  A  L  A  H  L  A  I  L  E  E  G  E  T  L  P  A  S  P  Q  A  T  T  K  H  P  R  H  R  P  G  C  T  C  I  V  C  I  Q  P  P  S  G  K  G  P  K  H  K  Q  S  C  D  C  N  V  C  K  S  V  K  R  R  F  K  T  L  M  M  K  R  E  K  K  L  S  E  K  E  A  E  A  T  C  Q  K  L  Q  P  Q  S  A  G  Q  L  L  D  A  D  D  I  Q  E  P  I  D  D  A  V  H  S  S  P  Q  H  E  E  L  N  I  E  G  S  V  D  P  N  Y  L  N  E  K  K  S  S  V  E  D  P  N  Y  L  D  E  K  K  S  S  V  D  D  T  N  Y  L  S  E  K  I  S  S  V  D  D  P  S  Y  L  N  E  K  E  S  S  V  D  D  P  N  I  L  N  E  K  K  S  S  V  D  D  P  N  C  L  N  E  K  K  S  A  V  D  D  P  N  Y  V  D  E  R  K  S  S  V  D  D  P  N  C  L  K  E  K  K  S  S  A  S  P  F  K  G  E  F  D  L  N  A  K  P  D  R  D  D  E  L  S  P  G  S  D  S  G  S  M  M  R  M  I  K  R  A  A  E  Q  Y  V  R  H  C  D  N  G  S  S  V  G  N  Q  R  D  G  D  G  A  G  E  T  N  P  G  N  C  V  I  V  S  G  S  H  Q  A  D  V  D  H  N  R  P  L  P  I  S  A  A  A  S  L  A  P  N  D  Q  *  V  A  P  Y  M  R  H  L  N  *  L  C  Y  I  K  N  Q  R  Y  S  A  V  Y  G  N  L  Y  I  L  A  L  L  A  S  C  I  V  H  R  *  T  *  Q  V  A  T  D  V  I  F  L  Q  S  T  G  C  I  L  Q  W  P  R  G  A  L  H  I  Y  Y  I  N  G  W  K  </first_frame>
            <second_frame>  E  K  F  L  T  M  L  T  F  H  R  D  G  L  V  Q  T  T  H  A  T  P  R   : G  L  C  A  Q  Q  F  K  N  *  Q  Q  I  I  *  G  T  Y  Y  L  I  L  I  K  :  L  P  R  K  G  R  L  L  N  R  K  W  T  W  L  K  L  W  M  G  L  M  P  L  L  I  *  L  S  *  K  R  E  R  P  F  Q  H  H  H  R  P  Q  L  S  I  H  V  I  D  L  G  V  H  A  L  S  A  S  S  P  L  V  E  K  V  L  S  T  S  N  H  V  I  V  T  S  V  N  Q  *  S  V  V  S  K  H  *  *  *  S  V  K  K  S  Y  Q  R  K  K  Q  K  L  L  V  K  S  C  S  R  N  Q  L  G  N  C  L  M  L  M  T  F  K  N  L  L  M  M  Q  C  I  Q  A  L  S  M  K  S  *  T  L  K  V  L  L  I  P  I  T  L  M  R  R  N  L  L  L  R  I  P  I  T  L  M  R  R  N  L  Q  L  M  T  Q  I  T  L  V  R  R  Y  L  L  L  M  T  P  A  T  L  M  R  R  N  L  L  L  M  I  P  T  S  *  M  R  R  N  L  L  L  M  I  L  T  A  *  M  R  R  N  L  L  L  M  I  P  T  T  W  M  R  G  N  L  L  L  M  I  P  I  A  L  R  R  R  N  L  L  L  H  H  L  K  V  N  L  T  *  M  L  S  Q  I  G  T  T  S  F  H  Q  A  L  I  L  V  A  *  C  A  *  S  N  V  L  L  S  N  M  S  G  T  V  I  M  E  V  P  W  V  T  K  E  M  E  M  V  L  G  R  Q  I  R  V  I  V  L  L  L  V  V  V  I  K  L  M  *  I  I  I  G  L  Y  P  *  A  L  L  H  L  W  H  L  M  T  S  K  L  L  P  T  *  G  T  *  I  S  C  A  I  L  K  T  R  G  T  P  Q  C  M  E  I  C  T  F  W  L  C  W  R  H  A  L  Y  I  D  R  R  S  K  *  Q  L  M  *  S  F  C  N  P  Q  V  A  F  C  N  G  R  E  V  P  Y  I  F  I  I  *  M  A  G  K </second_frame>
            <third_frame>   K  S  S  *  Q  C  *  P  S  I  E  M  D  L  F  R  Q  L  M  R  P  R  E  :  V  C  V  L  S  S  S  R  I  N  S  R  S  S  E  G  P  T  T  S  Y  *  *  S :   F  Q  E  K  E  G  F  *  T  G  N  G  L  G  *  N  S  G  W  A  *  C  P  C  S  S  S  Y  P  R  R  G  R  D  P  S  S  I  T  T  G  H  N  *  A  S  T  S  *  T  W  V  Y  M  H  C  L  H  P  A  P  *  W  K  R  S  *  A  Q  A  I  M  *  L  *  R  L  *  I  S  K  A  S  F  Q  N  I  D  D  E  A  *  K  K  V  I  R  E  R  S  R  S  Y  L  S  K  A  A  A  A  I  S  W  A  I  A  *  C  *  *  H  S  R  T  Y  *  *  C  S  A  F  K  P  S  A  *  R  A  E  H  *  R  F  C  *  S  Q  L  P  *  *  E  E  I  F  C  *  G  S  Q  L  P  *  *  E  E  I  F  S  *  *  H  K  L  P  *  *  E  D  I  F  C  *  *  P  Q  L  P  *  *  E  G  I  F  C  *  *  S  Q  H  P  E  *  E  E  I  F  C  *  *  S  *  L  P  E  *  E  E  I  C  C  *  *  S  Q  L  R  G  *  E  E  I  F  C  *  *  S  Q  L  P  *  G  E  E  I  F  C  F  T  I  *  R  *  I  *  P  E  C  *  A  R  *  G  R  R  A  F  T  R  L  *  F  W  *  H  D  A  H  D  Q  T  C  C  *  A  I  C  Q  A  L  *  *  W  K  F  R  G  *  P  K  R  W  R  W  C  W  G  D  K  S  G  *  L  C  Y  C  *  W  *  S  S  S  *  C  R  S  *  *  A  F  T  H  K  R  C  C  I  F  G  T  *  *  P  V  S  C  S  L  H  E  A  P  K  L  A  V  L  Y  *  K  P  E  V  L  R  S  V  W  K  F  V  H  F  G  F  A  G  V  M  H  C  T  *  I  D  V  A  S  S  N  *  C  N  L  S  A  I  H  R  L  H  F  A  M  A  A  R  C  L  T  Y  L  L  Y  K  W  L  E   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0329G05.3" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="100547" stop="100617"/>
                    <exon start="101486" stop="101556"/>
                    <exon start="101684" stop="102717"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1173</number_coding_nucleotides>
                  <number_encoded_amino_acids>391</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RKVPDNVDLPSRWTCSDNSCDPERSVCSAVQELTADHLRDLLPHINKASKKRKASKQEMDLVETLDGLDALAHLAILEEGETLPASPQATTKHPRHRPGCTCIVCIQPPSGKGPKHKQSCDCNVCKSVKRRFKTLMMKREKKLSEKEAEATCQKLQPQSAGQLLDADDIQEPIDDAVHSSPQHEELNIEGSVDPNYLNEKKSSVEDPNYLDEKKSSVDDTNYLSEKISSVDDPSYLNEKESSVDDPNILNEKKSSVDDPNCLNEKKSAVDDPNYVDERKSSVDDPNCLKEKKSSASPFKGEFDLNAKPDRDDELSPGSDSGSMMRMIKRAAEQYVRHCDNGSSVGNQRDGDGAGETNPGNCVIVSGSHQADVDHNRPLPISAAASLAPNDQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="-" PGL_start="117568" PGL_stop="116737"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="117568" e_stop="117511"/>
            <exon e_start="117159" e_stop="116737"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="117568" e_stop="117511" e_length="58"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.998">
            <gDNA_intron_boundary i_start="117510" i_stop="117160" i_length="351"/>
          </intron>
          <exon e_serial="2" e_score="0.995">
            <gDNA_exon_boundary e_start="117159" e_stop="116737" e_length="423"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="117568" stop="117511"/>
              <exon start="117159" stop="116737"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U583936" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTTACAGCCTGCCATGTTCGAAGATTTTGTGAAGCCTTTCCAAATAAACATGGAGGAG : GAAGGACCATTGCCTCATAATGACCGTTTGAGTTATCAACCGCTGGACATTTATCCTGCGCCCCTCCACAGAAGTTAACATCAATGGTGGTTGTTTGAGTTTTCTGGTCAGACCGACATCGGAAGTTGCCTAGTAGTGAATGTTGAGGTTTAGAGACAATGTCCTTTTTCACATCAACTCTGACCAAAACCTTTGCAAACCAACAGAAAGGCTGCTTAGTAGATAGTAAGGTTGGGTTGCAAATGTTCCATTTTTTATTATTTAGGCACATTTTTGTTTCTTCTTTCCTTCTTTTGCTCTCTTTTCTTTTCCCTTAATTTATTTCATGGTTTAAATAGAGCAACTTTGTACAAGAAAGACCAATGAGAATCGAAAATGTAAAATTTGGCTATTTATATAAGTTAATGTTAAGTATATATTCAT</gDNA_template>
            <first_frame> V  T  A  C  H  V  R  R  F  C  E  A  F  P  N  K  H  G  G   : G  R  T  I  A  S  *  *  P  F  E  L  S  T  A  G  H  L  S  C  A  P  P  Q  K  L  T  S  M  V  V  V  *  V  F  W  S  D  R  H  R  K  L  P  S  S  E  C  *  G  L  E  T  M  S  F  F  T  S  T  L  T  K  T  F  A  N  Q  Q  K  G  C  L  V  D  S  K  V  G  L  Q  M  F  H  F  L  L  F  R  H  I  F  V  S  S  F  L  L  L  L  S  F  L  F  P  *  F  I  S  W  F  K  *  S  N  F  V  Q  E  R  P  M  R  I  E  N  V  K  F  G  Y  L  Y  K  L  M  L  S  I  Y  S  </first_frame>
            <second_frame>  L  Q  P  A  M  F  E  D  F  V  K  P  F  Q  I  N  M  E  E  :  E  G  P  L  P  H  N  D  R  L  S  Y  Q  P  L  D  I  Y  P  A  P  L  H  R  S  *  H  Q  W  W  L  F  E  F  S  G  Q  T  D  I  G  S  C  L  V  V  N  V  E  V  *  R  Q  C  P  F  S  H  Q  L  *  P  K  P  L  Q  T  N  R  K  A  A  *  *  I  V  R  L  G  C  K  C  S  I  F  Y  Y  L  G  T  F  L  F  L  L  S  F  F  C  S  L  F  F  S  L  N  L  F  H  G  L  N  R  A  T  L  Y  K  K  D  Q  *  E  S  K  M  *  N  L  A  I  Y  I  S  *  C  *  V  Y  I  H </second_frame>
            <third_frame>   Y  S  L  P  C  S  K  I  L  *  S  L  S  K  *  T  W  R  R :   K  D  H  C  L  I  M  T  V  *  V  I  N  R  W  T  F  I  L  R  P  S  T  E  V  N  I  N  G  G  C  L  S  F  L  V  R  P  T  S  E  V  A  *  *  *  M  L  R  F  R  D  N  V  L  F  H  I  N  S  D  Q  N  L  C  K  P  T  E  R  L  L  S  R  *  *  G  W  V  A  N  V  P  F  F  I  I  *  A  H  F  C  F  F  F  P  S  F  A  L  F  S  F  P  L  I  Y  F  M  V  *  I  E  Q  L  C  T  R  K  T  N  E  N  R  K  C  K  I  W  L  F  I  *  V  N  V  K  Y  I  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0329G05.3"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="128279" PGL_stop="123525"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="128279" e_stop="128237"/>
            <exon e_start="127020" e_stop="126908"/>
            <exon e_start="126245" e_stop="126029"/>
            <exon e_start="124674" e_stop="124603"/>
            <exon e_start="123589" e_stop="123525"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.991" acc_prob="0.993" e_score="0.977"/>
          <exon-intron don_prob="0.996" acc_prob="0.880" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.946" e_score="0.986"/>
          <exon-intron don_prob="0.984" acc_prob="0.164" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.977">
            <gDNA_exon_boundary e_start="128279" e_stop="128237" e_length="43"/>
          </exon>
          <intron i_serial="1" don_prob="0.991" acc_prob="0.993">
            <gDNA_intron_boundary i_start="128236" i_stop="127021" i_length="1216"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="127020" e_stop="126908" e_length="113"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.880">
            <gDNA_intron_boundary i_start="126907" i_stop="126246" i_length="662"/>
          </intron>
          <exon e_serial="3" e_score="0.986">
            <gDNA_exon_boundary e_start="126245" e_stop="126029" e_length="217"/>
          </exon>
          <intron i_serial="3" don_prob="0.994" acc_prob="0.946">
            <gDNA_intron_boundary i_start="126028" i_stop="124675" i_length="1354"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="124674" e_stop="124603" e_length="72"/>
          </exon>
          <intron i_serial="4" don_prob="0.984" acc_prob="0.164">
            <gDNA_intron_boundary i_start="124602" i_stop="123590" i_length="1013"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="123589" e_stop="123525" e_length="65"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="128279" stop="128237"/>
              <exon start="127020" stop="126908"/>
              <exon start="126245" stop="126029"/>
              <exon start="124674" stop="124603"/>
              <exon start="123589" stop="123525"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U574669" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGCTGCACGAATCAATGAAATGTTTTCTGTTGCTAGGAGAAAT : GCTCCAGCTTTTGTATTTATAGATGAGATTGATGCTATTGCTGGAAGGCATGCAAGAAAGGATCCACGCAGGAAGGCAACATTTGAGGCTCTGATTTCTCAGCTTGACGGGGA : GAAAGAAAAAACTGGTGTTGATAGGTTTTCACTAAGACAAGCTGTCATATTCATTTGTGCAACCAATCGGCCAGATGAACTGGACTTAGAATTTGTCCGCCCTGGACGTATTGACAGACGTGTGTATATTGGTTTACCAGATGCAAAGCAACGAGTGCAAATTTTTGGAGTTCACAGTGCTGGGAAACAGCTTTCCGAGGATATTGCCTTTGAGAAA : CTTGTCTTTCGTACAGTTGGATATTCTGGGGCAGACATAAGAAATCTAGTCAATGAAGCTGGAATAATGTCT : GTAAGAAAAGGACATTCTAAGATCAACCAGCAGGATATCGTCGATGTTTTGGACAAGCAATTGCT</gDNA_template>
            <first_frame> C  C  T  N  Q  *  N  V  F  C  C  *  E  K   : C  S  S  F  C  I  Y  R  *  D  *  C  Y  C  W  K  A  C  K  K  G  S  T  Q  E  G  N  I  *  G  S  D  F  S  A  *  R  G  :  E  R  K  N  W  C  *  *  V  F  T  K  T  S  C  H  I  H  L  C  N  Q  S  A  R  *  T  G  L  R  I  C  P  P  W  T  Y  *  Q  T  C  V  Y  W  F  T  R  C  K  A  T  S  A  N  F  W  S  S  Q  C  W  E  T  A  F  R  G  Y  C  L  *  E   : T  C  L  S  Y  S  W  I  F  W  G  R  H  K  K  S  S  Q  *  S  W  N  N  V   : C  K  K  R  T  F  *  D  Q  P  A  G  Y  R  R  C  F  G  Q  A  I  A </first_frame>
            <second_frame>  A  A  R  I  N  E  M  F  S  V  A  R  R  N  :  A  P  A  F  V  F  I  D  E  I  D  A  I  A  G  R  H  A  R  K  D  P  R  R  K  A  T  F  E  A  L  I  S  Q  L  D  G  E :   K  E  K  T  G  V  D  R  F  S  L  R  Q  A  V  I  F  I  C  A  T  N  R  P  D  E  L  D  L  E  F  V  R  P  G  R  I  D  R  R  V  Y  I  G  L  P  D  A  K  Q  R  V  Q  I  F  G  V  H  S  A  G  K  Q  L  S  E  D  I  A  F  E  K  :  L  V  F  R  T  V  G  Y  S  G  A  D  I  R  N  L  V  N  E  A  G  I  M  S  :  V  R  K  G  H  S  K  I  N  Q  Q  D  I  V  D  V  L  D  K  Q  L   </second_frame>
            <third_frame>   L  H  E  S  M  K  C  F  L  L  L  G  E  M :   L  Q  L  L  Y  L  *  M  R  L  M  L  L  L  E  G  M  Q  E  R  I  H  A  G  R  Q  H  L  R  L  *  F  L  S  L  T  G   : R  K  K  K  L  V  L  I  G  F  H  *  D  K  L  S  Y  S  F  V  Q  P  I  G  Q  M  N  W  T  *  N  L  S  A  L  D  V  L  T  D  V  C  I  L  V  Y  Q  M  Q  S  N  E  C  K  F  L  E  F  T  V  L  G  N  S  F  P  R  I  L  P  L  R  N :   L  S  F  V  Q  L  D  I  L  G  Q  T  *  E  I  *  S  M  K  L  E  *  C  L :   *  E  K  D  I  L  R  S  T  S  R  I  S  S  M  F  W  T  S  N  C  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0329G05.3" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="128278" stop="128237"/>
                    <exon start="127020" stop="126908"/>
                    <exon start="126245" stop="126029"/>
                    <exon start="124674" stop="124603"/>
                    <exon start="123589" stop="123527"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>507</number_coding_nucleotides>
                  <number_encoded_amino_acids>169</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AARINEMFSVARRNAPAFVFIDEIDAIAGRHARKDPRRKATFEALISQLDGEKEKTGVDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRVYIGLPDAKQRVQIFGVHSAGKQLSEDIAFEKLVFRTVGYSGADIRNLVNEAGIMSVRKGHSKINQQDIVDVLDKQL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="129708" PGL_stop="128828"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="129708" e_stop="129508"/>
            <exon e_start="129133" e_stop="129056"/>
            <exon e_start="128965" e_stop="128828"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.982" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="129708" e_stop="129508" e_length="201"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.995">
            <gDNA_intron_boundary i_start="129507" i_stop="129134" i_length="374"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="129133" e_stop="129056" e_length="78"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.982">
            <gDNA_intron_boundary i_start="129055" i_stop="128966" i_length="90"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="128965" e_stop="128828" e_length="138"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="129708" stop="129508"/>
              <exon start="129133" stop="129056"/>
              <exon start="128965" stop="128828"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U598547" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCAGAACAATTAGATTCAGTAAATGCGAGGTATGTGGTTGAATTTGACATGAAGGAAGTTGAGAACAGCCTTCGCAAAGATGTTGTTGAGAAGACAAGAGAAACTCAAGGAACCAGGGCATTGTGGATCTCGAAAAGATGGTGGAGATATCGCCCGAAACTTCCCTATACCTATTTTCTTCAAAAACTTGATACTTCTGAG : GTGGCTGCTATAGTCTTCACAGAGGATCTGAAGAGAGTGTTTGTCACAATGAAAGAAGGATTCCCTCTTGAATATATT : GTTGATATTCCACTAGATCCTTTCTTATTTGAGATGATATCAAGTTCTGGAGCTGAAGTAGATCTACTTCAGAAGCGGCAGATTCATTACTTTTTCAAAGTTCTTTTTGCTTTATTGCCTGGAATACTGATTTTGTGG</gDNA_template>
            <first_frame> A  E  Q  L  D  S  V  N  A  R  Y  V  V  E  F  D  M  K  E  V  E  N  S  L  R  K  D  V  V  E  K  T  R  E  T  Q  G  T  R  A  L  W  I  S  K  R  W  W  R  Y  R  P  K  L  P  Y  T  Y  F  L  Q  K  L  D  T  S  E  :  V  A  A  I  V  F  T  E  D  L  K  R  V  F  V  T  M  K  E  G  F  P  L  E  Y  I  :  V  D  I  P  L  D  P  F  L  F  E  M  I  S  S  S  G  A  E  V  D  L  L  Q  K  R  Q  I  H  Y  F  F  K  V  L  F  A  L  L  P  G  I  L  I  L  W </first_frame>
            <second_frame>  Q  N  N  *  I  Q  *  M  R  G  M  W  L  N  L  T  *  R  K  L  R  T  A  F  A  K  M  L  L  R  R  Q  E  K  L  K  E  P  G  H  C  G  S  R  K  D  G  G  D  I  A  R  N  F  P  I  P  I  F  F  K  N  L  I  L  L  R :   W  L  L  *  S  S  Q  R  I  *  R  E  C  L  S  Q  *  K  K  D  S  L  L  N  I  L :   L  I  F  H  *  I  L  S  Y  L  R  *  Y  Q  V  L  E  L  K  *  I  Y  F  R  S  G  R  F  I  T  F  S  K  F  F  L  L  Y  C  L  E  Y  *  F  C   </second_frame>
            <third_frame>   R  T  I  R  F  S  K  C  E  V  C  G  *  I  *  H  E  G  S  *  E  Q  P  S  Q  R  C  C  *  E  D  K  R  N  S  R  N  Q  G  I  V  D  L  E  K  M  V  E  I  S  P  E  T  S  L  Y  L  F  S  S  K  T  *  Y  F  *   : G  G  C  Y  S  L  H  R  G  S  E  E  S  V  C  H  N  E  R  R  I  P  S  *  I  Y   : C  *  Y  S  T  R  S  F  L  I  *  D  D  I  K  F  W  S  *  S  R  S  T  S  E  A  A  D  S  L  L  F  Q  S  S  F  C  F  I  A  W  N  T  D  F  V  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0329G05.3" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="129708" stop="129508"/>
                    <exon start="129133" stop="129056"/>
                    <exon start="128965" stop="128828"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>417</number_coding_nucleotides>
                  <number_encoded_amino_acids>139</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AEQLDSVNARYVVEFDMKEVENSLRKDVVEKTRETQGTRALWISKRWWRYRPKLPYTYFLQKLDTSEVAAIVFTEDLKRVFVTMKEGFPLEYIVDIPLDPFLFEMISSSGAEVDLLQKRQIHYFFKVLFALLPGILILW</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="-" PGL_start="132488" PGL_stop="131739"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="132488" e_stop="131739"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.992">
            <gDNA_exon_boundary e_start="132488" e_stop="131739" e_length="750"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="132488" stop="131739"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U573238" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GACGACCAAGACCGGCGACAATTCAGTTTTTCCGACGAGCAAGAGAGCCGAAACCGAAGCATTATCTTCGTATTCTCTAAGCTTCTCAATGCATCTAACCACTACTCCTCCTCCTCAACAGCTGAATTCAATACAATTATCTTCAAAACCCCTTTTACTCACATTGCCATTCAAATGCAGAAGGAAGTTTTCCCGTATAAGAAGACCTACCATTGTAGCTTCTTCTTCCAATACTAATAACAGTCCTGAAGGGTTTTCTTGGCTGCAACTTTCACAGTCCATTCGCCGTGGTTCCGAACGTTTCTTGAATCAATTGGAAGACTCTGTGAAGCAAGAGACGGGTTTTGATTTTAAGGATGTTAAAGTTAAAGTTGGGGAATTTTCAGGTCGAGCTGTTGATTCAGCCAAGAATGGCCAAGTTTTGCTGCAACGTTTTCAGTCTGAGTTGTTTCCTGAGTTCTTGAATTGGAACAAATTCGAGTCCTGGAAGGTGAATTTTCCCATTTCTTATTTGAGTTATTTGTATAACTTTGTGCTCACATTATCCTTTTTCCCCTTCCCCCAGGACGTCAAGAAATGGGATTCCAAAAGAGTTGGTGTATTCATTCTCTATATTATAGTTACGGTATGTTCTTGTCAAAAAATATATATGGCAATTCGAGCTCCTATTATTAATAGGGAAAGAAAAGAACTTACTGAGGCATACATGGAAGCATTGATTCCTGAACCTACTCCTGTTAATGTCAAAAG</gDNA_template>
            <first_frame> D  D  Q  D  R  R  Q  F  S  F  S  D  E  Q  E  S  R  N  R  S  I  I  F  V  F  S  K  L  L  N  A  S  N  H  Y  S  S  S  S  T  A  E  F  N  T  I  I  F  K  T  P  F  T  H  I  A  I  Q  M  Q  K  E  V  F  P  Y  K  K  T  Y  H  C  S  F  F  F  Q  Y  *  *  Q  S  *  R  V  F  L  A  A  T  F  T  V  H  S  P  W  F  R  T  F  L  E  S  I  G  R  L  C  E  A  R  D  G  F  *  F  *  G  C  *  S  *  S  W  G  I  F  R  S  S  C  *  F  S  Q  E  W  P  S  F  A  A  T  F  S  V  *  V  V  S  *  V  L  E  L  E  Q  I  R  V  L  E  G  E  F  S  H  F  L  F  E  L  F  V  *  L  C  A  H  I  I  L  F  P  L  P  P  G  R  Q  E  M  G  F  Q  K  S  W  C  I  H  S  L  Y  Y  S  Y  G  M  F  L  S  K  N  I  Y  G  N  S  S  S  Y  Y  *  *  G  K  K  R  T  Y  *  G  I  H  G  S  I  D  S  *  T  Y  S  C  *  C  Q  K </first_frame>
            <second_frame>  T  T  K  T  G  D  N  S  V  F  P  T  S  K  R  A  E  T  E  A  L  S  S  Y  S  L  S  F  S  M  H  L  T  T  T  P  P  P  Q  Q  L  N  S  I  Q  L  S  S  K  P  L  L  L  T  L  P  F  K  C  R  R  K  F  S  R  I  R  R  P  T  I  V  A  S  S  S  N  T  N  N  S  P  E  G  F  S  W  L  Q  L  S  Q  S  I  R  R  G  S  E  R  F  L  N  Q  L  E  D  S  V  K  Q  E  T  G  F  D  F  K  D  V  K  V  K  V  G  E  F  S  G  R  A  V  D  S  A  K  N  G  Q  V  L  L  Q  R  F  Q  S  E  L  F  P  E  F  L  N  W  N  K  F  E  S  W  K  V  N  F  P  I  S  Y  L  S  Y  L  Y  N  F  V  L  T  L  S  F  F  P  F  P  Q  D  V  K  K  W  D  S  K  R  V  G  V  F  I  L  Y  I  I  V  T  V  C  S  C  Q  K  I  Y  M  A  I  R  A  P  I  I  N  R  E  R  K  E  L  T  E  A  Y  M  E  A  L  I  P  E  P  T  P  V  N  V  K   </second_frame>
            <third_frame>   R  P  R  P  A  T  I  Q  F  F  R  R  A  R  E  P  K  P  K  H  Y  L  R  I  L  *  A  S  Q  C  I  *  P  L  L  L  L  L  N  S  *  I  Q  Y  N  Y  L  Q  N  P  F  Y  S  H  C  H  S  N  A  E  G  S  F  P  V  *  E  D  L  P  L  *  L  L  L  P  I  L  I  T  V  L  K  G  F  L  G  C  N  F  H  S  P  F  A  V  V  P  N  V  S  *  I  N  W  K  T  L  *  S  K  R  R  V  L  I  L  R  M  L  K  L  K  L  G  N  F  Q  V  E  L  L  I  Q  P  R  M  A  K  F  C  C  N  V  F  S  L  S  C  F  L  S  S  *  I  G  T  N  S  S  P  G  R  *  I  F  P  F  L  I  *  V  I  C  I  T  L  C  S  H  Y  P  F  S  P  S  P  R  T  S  R  N  G  I  P  K  E  L  V  Y  S  F  S  I  L  *  L  R  Y  V  L  V  K  K  Y  I  W  Q  F  E  L  L  L  L  I  G  K  E  K  N  L  L  R  H  T  W  K  H  *  F  L  N  L  L  L  L  M  S  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0329G05.3" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="132487" stop="131741"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>747</number_coding_nucleotides>
                  <number_encoded_amino_acids>249</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TTKTGDNSVFPTSKRAETEALSSYSLSFSMHLTTTPPPQQLNSIQLSSKPLLLTLPFKCRRKFSRIRRPTIVASSSNTNNSPEGFSWLQLSQSIRRGSERFLNQLEDSVKQETGFDFKDVKVKVGEFSGRAVDSAKNGQVLLQRFQSELFPEFLNWNKFESWKVNFPISYLSYLYNFVLTLSFFPFPQDVKKWDSKRVGVFILYIIVTVCSCQKIYMAIRAPIINRERKELTEAYMEALIPEPTPVNVK</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 56 chains have been computed
$ 
$ memory statistics:
$ 50616 bytes spliced alignments in total
$ 23 spliced alignments have been stored
$ 2200 bytes was the average size of a spliced alignment
$ 23584 bytes predicted gene locations in total
$ 14 predicted gene locations have been stored
$ 1684 bytes was the average size of a predicted gene location
$ 1 megabytes was the average size of the backtrace matrix
$ 60 backtrace matrices have been allocated
$ 
$ date finished: 2009-07-28 19:46:27
-->
