<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-12-01 10:18:43"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E347313" ref_strand="+" ref_description="SGN-E347313 [cTOF-33-K15]">
      <seq>aatagtggtcagtctgttagagtgccatagattgcagtaatttagttagagctaggatgatatttctattatcagaacaaacaatctgaagcttattggtgaattgcctagtgtaacatggacccaatctgactgttaacaatagtgccagatttatagccatgtttacactatggttgatgctgcagggtggctgttaactgccactgcttggtagatggtggtggattagacatgtgcttgtgccagcaacgtgaagaaaacaacgaacatattttgctacatgtgtgtatatactcaggattatggaatagaatccttcaatggctacagggacaacctccgggatcacaaagctgggagcttacacttccaatggatattagggaatactatagggaattttagagctgcacaagcgtttaaaatgatatatgctaaatgtgtcaattacattgtttgacgaaattatattttattaaaatgatgtcaagaatcttaaaacgagagctagattagaattttattcatgctctcaaaagaagaagaaaaaggttgaaagttgttttatatttattaagtacttttgctcaatattgttaataatatatttttattatattaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="3730" stop="2500"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3430" g_stop="2798" g_length="633"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="633" r_length="633" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-E347313" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>633</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E347313" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3430" e_stop="2798"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATAGTGGTCAGTCTGTTAGAGTGCCATAGATTGCAGTAATTTAGTTAGAGCTAGGATGATATTTCTATTATCAGAACAAACAATCTGAAGCTTATTGGTGAATTGCCTAGTGTAACATGGACCCAATCTGACTGTTAACAATAGTGCCAGATTTATAGCCATGTTTACACTATGGTTGATGCTGCAGGGTGGCTGTTAACTGCCACTGCTTGGTAGATGGTGGTGGATTAGACATGTGCTTGTGCCAGCAACGTGAAGAAAACAACGAACATATTTTGCTACATGTGTGTATATACTCAGGATTATGGAATAGAATCCTTCAATGGCTACAGGGACAACCTCCGGGATCACAAAGCTGGGAGCTTACACTTCCAATGGATATTAGGGAATACTATAGGGAATTTTAGAGCTGCACAAGCGTTTAAAATGATATATGCTAAATGTGTCAATTACATTGTTTGACGAAATTATATTTTATTAAAATGATGTCAAGAATCTTAAAACGAGAGCTAGATTAGAATTTTATTCATGCTCTCAAAAGAAGAAGAAAAAGGTTGAAAGTTGTTTTATATTTATTAAGTACTTTTGCTCAATATTGTTAATAATATATTTTTATTATATTATTATATACT</genome_strand>
        <mrna_strand>AATAGTGGTCAGTCTGTTAGAGTGCCATAGATTGCAGTAATTTAGTTAGAGCTAGGATGATATTTCTATTATCAGAACAAACAATCTGAAGCTTATTGGTGAATTGCCTAGTGTAACATGGACCCAATCTGACTGTTAACAATAGTGCCAGATTTATAGCCATGTTTACACTATGGTTGATGCTGCAGGGTGGCTGTTAACTGCCACTGCTTGGTAGATGGTGGTGGATTAGACATGTGCTTGTGCCAGCAACGTGAAGAAAACAACGAACATATTTTGCTACATGTGTGTATATACTCAGGATTATGGAATAGAATCCTTCAATGGCTACAGGGACAACCTCCGGGATCACAAAGCTGGGAGCTTACACTTCCAATGGATATTAGGGAATACTATAGGGAATTTTAGAGCTGCACAAGCGTTTAAAATGATATATGCTAAATGTGTCAATTACATTGTTTGACGAAATTATATTTTATTAAAATGATGTCAAGAATCTTAAAACGAGAGCTAGATTAGAATTTTATTCATGCTCTCAAAAGAAGAAGAAAAAGGTTGAAAGTTGTTTTATATTTATTAAGTACTTTTGCTCAATATTGTTAATAATATATTTTTATTATATTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E393060" ref_strand="+" ref_description="SGN-E393060 [TUS-37-F14](-)">
      <seq>cttggtagatggtggtggattagacatgtgcttgtgccagcaacgtgaagaaaacaacgaacatattttgctacatgtgtgtatatactcaggattatggaatagaatccttcaatggctacagggacaacctccgggatcacaaagctgggagcttacacttccaatggatattagggaatactatagggaattttagagctgcacaagcgtttaaaatgatatatgctaaatgtgtcaattacattgtttgacgaaattatattttattaaaatgatgtcaagaatcttaaaacgagagctagattagaattttattcatgctctcaaaagaagaagaaaaaggttgaaagttgttttatatttattaagtacttttgctcaatattgttaataatatatttttattatattaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="3521" stop="2500"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3221" g_stop="2798" g_length="424"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="424" r_length="424" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-E393060" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>424</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E393060" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3221" e_stop="2798"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGGTAGATGGTGGTGGATTAGACATGTGCTTGTGCCAGCAACGTGAAGAAAACAACGAACATATTTTGCTACATGTGTGTATATACTCAGGATTATGGAATAGAATCCTTCAATGGCTACAGGGACAACCTCCGGGATCACAAAGCTGGGAGCTTACACTTCCAATGGATATTAGGGAATACTATAGGGAATTTTAGAGCTGCACAAGCGTTTAAAATGATATATGCTAAATGTGTCAATTACATTGTTTGACGAAATTATATTTTATTAAAATGATGTCAAGAATCTTAAAACGAGAGCTAGATTAGAATTTTATTCATGCTCTCAAAAGAAGAAGAAAAAGGTTGAAAGTTGTTTTATATTTATTAAGTACTTTTGCTCAATATTGTTAATAATATATTTTTATTATATTATTATATACT</genome_strand>
        <mrna_strand>CTTGGTAGATGGTGGTGGATTAGACATGTGCTTGTGCCAGCAACGTGAAGAAAACAACGAACATATTTTGCTACATGTGTGTATATACTCAGGATTATGGAATAGAATCCTTCAATGGCTACAGGGACAACCTCCGGGATCACAAAGCTGGGAGCTTACACTTCCAATGGATATTAGGGAATACTATAGGGAATTTTAGAGCTGCACAAGCGTTTAAAATGATATATGCTAAATGTGTCAATTACATTGTTTGACGAAATTATATTTTATTAAAATGATGTCAAGAATCTTAAAACGAGAGCTAGATTAGAATTTTATTCATGCTCTCAAAAGAAGAAGAAAAAGGTTGAAAGTTGTTTTATATTTATTAAGTACTTTTGCTCAATATTGTTAATAATATATTTTTATTATATTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E392911" ref_strand="+" ref_description="SGN-E392911 [TUS-37-F15](-)">
      <seq>ctcaggattatggaatagaatccttcaatggctacagggacaacctccgggatcacaaagctgggagcttacacttccaatggatattagggaatactatagggaattttagagctgcacaagcgtttaaaatgatatatgctaaatgtgtcaattacattgtttgacgaaattatattttattaaaatgatgtcaagaatcttaaaacgagagctagattagaattttattcatgctctcaaaagaagaagaaaaaggttgaaagttgttttatatttattaagtacttttgctcaatattgttaataatatatttttattatattaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="3434" stop="2500"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3134" g_stop="2798" g_length="337"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="337" r_length="337" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-E392911" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>337</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E392911" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3134" e_stop="2798"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCAGGATTATGGAATAGAATCCTTCAATGGCTACAGGGACAACCTCCGGGATCACAAAGCTGGGAGCTTACACTTCCAATGGATATTAGGGAATACTATAGGGAATTTTAGAGCTGCACAAGCGTTTAAAATGATATATGCTAAATGTGTCAATTACATTGTTTGACGAAATTATATTTTATTAAAATGATGTCAAGAATCTTAAAACGAGAGCTAGATTAGAATTTTATTCATGCTCTCAAAAGAAGAAGAAAAAGGTTGAAAGTTGTTTTATATTTATTAAGTACTTTTGCTCAATATTGTTAATAATATATTTTTATTATATTATTATATACT</genome_strand>
        <mrna_strand>CTCAGGATTATGGAATAGAATCCTTCAATGGCTACAGGGACAACCTCCGGGATCACAAAGCTGGGAGCTTACACTTCCAATGGATATTAGGGAATACTATAGGGAATTTTAGAGCTGCACAAGCGTTTAAAATGATATATGCTAAATGTGTCAATTACATTGTTTGACGAAATTATATTTTATTAAAATGATGTCAAGAATCTTAAAACGAGAGCTAGATTAGAATTTTATTCATGCTCTCAAAAGAAGAAGAAAAAGGTTGAAAGTTGTTTTATATTTATTAAGTACTTTTGCTCAATATTGTTAATAATATATTTTTATTATATTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E372269" ref_strand="+" ref_description="SGN-E372269 [TUS-30-L19](-)">
      <seq>ggttcttaccaaatcaaatggcacagctgttgtatagacaaaaatggtgcttactggagccttatgcccctgaacactaatcagttcttcactgtacaggaatcttttaatagtggtcagtctgttagagtgccatagattgcagtaatttagttagagctaggatgatatttctattatcagaacaaacaatctgaagcttattggtgaattgcctagtgtaacatggacccaatctgactgttaacaatagtgccagatttatagccatgtttacactatggttgatgctgcagggtggctgttaactgccactgcttggtagatggtggtggattagacatgtgcttgtgccagcaacgtgaagaaaacaacgaacatattttgctacatgtgtgtatatactcaggattatggaatagaatccttcaatggctacagggacaacctccgggatcacaaagctgggagcttacacttccaatggatattagggaatactatagggaattttagagctgcacaagcgtttaaaatgatatatgctaaatgtgtcaattacattgtttgacgaaattatattttattaaaatgatgtcaagaatcttaaaacgagagctagattagaattttattcatgctctcaaaagaagaagaaaaaggttgaaagttgttttatatttattaagtacttttgctcaatattgttaataatatatttttattatattaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="3838" stop="2500"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3538" g_stop="2799" g_length="740"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="740" r_length="740" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-E372269" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>740</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E372269" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3538" e_stop="2799"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTTCTTACCAAATCAAATGGCACAGCTGTTGTATAGACAAAAATGGTGCTTACTGGAGCCTTATGCCCCTGAACACTAATCAGTTCTTCACTGTACAGGAATCTTTTAATAGTGGTCAGTCTGTTAGAGTGCCATAGATTGCAGTAATTTAGTTAGAGCTAGGATGATATTTCTATTATCAGAACAAACAATCTGAAGCTTATTGGTGAATTGCCTAGTGTAACATGGACCCAATCTGACTGTTAACAATAGTGCCAGATTTATAGCCATGTTTACACTATGGTTGATGCTGCAGGGTGGCTGTTAACTGCCACTGCTTGGTAGATGGTGGTGGATTAGACATGTGCTTGTGCCAGCAACGTGAAGAAAACAACGAACATATTTTGCTACATGTGTGTATATACTCAGGATTATGGAATAGAATCCTTCAATGGCTACAGGGACAACCTCCGGGATCACAAAGCTGGGAGCTTACACTTCCAATGGATATTAGGGAATACTATAGGGAATTTTAGAGCTGCACAAGCGTTTAAAATGATATATGCTAAATGTGTCAATTACATTGTTTGACGAAATTATATTTTATTAAAATGATGTCAAGAATCTTAAAACGAGAGCTAGATTAGAATTTTATTCATGCTCTCAAAAGAAGAAGAAAAAGGTTGAAAGTTGTTTTATATTTATTAAGTACTTTTGCTCAATATTGTTAATAATATATTTTTATTATATTATTATATAC</genome_strand>
        <mrna_strand>GGTTCTTACCAAATCAAATGGCACAGCTGTTGTATAGACAAAAATGGTGCTTACTGGAGCCTTATGCCCCTGAACACTAATCAGTTCTTCACTGTACAGGAATCTTTTAATAGTGGTCAGTCTGTTAGAGTGCCATAGATTGCAGTAATTTAGTTAGAGCTAGGATGATATTTCTATTATCAGAACAAACAATCTGAAGCTTATTGGTGAATTGCCTAGTGTAACATGGACCCAATCTGACTGTTAACAATAGTGCCAGATTTATAGCCATGTTTACACTATGGTTGATGCTGCAGGGTGGCTGTTAACTGCCACTGCTTGGTAGATGGTGGTGGATTAGACATGTGCTTGTGCCAGCAACGTGAAGAAAACAACGAACATATTTTGCTACATGTGTGTATATACTCAGGATTATGGAATAGAATCCTTCAATGGCTACAGGGACAACCTCCGGGATCACAAAGCTGGGAGCTTACACTTCCAATGGATATTAGGGAATACTATAGGGAATTTTAGAGCTGCACAAGCGTTTAAAATGATATATGCTAAATGTGTCAATTACATTGTTTGACGAAATTATATTTTATTAAAATGATGTCAAGAATCTTAAAACGAGAGCTAGATTAGAATTTTATTCATGCTCTCAAAAGAAGAAGAAAAAGGTTGAAAGTTGTTTTATATTTATTAAGTACTTTTGCTCAATATTGTTAATAATATATTTTTATTATATTAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E342071" ref_strand="+" ref_description="SGN-E342071 [cTOF-10-D12]">
      <seq>aatagtggtcagtctgttagagtgccatagattgcagtaatttagttagagctaggatgatatttctattatcagaacaaacaatctgaagcttattggtgaattgcctagtgtaacatggacccaatctgactgttaacaatagtgccagatttatagccatgtttacactatggttgatgctgcagggtggctgttaactgccactgcttggtagatggtggtggattagacatgtgcttgtgccagcaacgtgaagaaaacaacgaacatattttgctacatgtgtgtatatactcaggattatggaatagaatccttcaatggctacagggacaacctccgggatcacaaagctgggagcttacacttccaatggatattagggaatactatagggaattttagagctgcacaagcgtttaaaatgatatatgctaaatgtgtcaattacattgtttgacgaaattatattttattaaaatgatgtcaagaatcttaaaacgagagctagattagaattttattcatgctctcaaaagaagaagaaaaaggttgaaagttgttttatatttattaagtacttttgctcaatattgntaataatatatttttattatattaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="3730" stop="2500"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3430" g_stop="2799" g_length="632"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="632" r_length="632" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-E342071" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>632</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E342071" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3430" e_stop="2799"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATAGTGGTCAGTCTGTTAGAGTGCCATAGATTGCAGTAATTTAGTTAGAGCTAGGATGATATTTCTATTATCAGAACAAACAATCTGAAGCTTATTGGTGAATTGCCTAGTGTAACATGGACCCAATCTGACTGTTAACAATAGTGCCAGATTTATAGCCATGTTTACACTATGGTTGATGCTGCAGGGTGGCTGTTAACTGCCACTGCTTGGTAGATGGTGGTGGATTAGACATGTGCTTGTGCCAGCAACGTGAAGAAAACAACGAACATATTTTGCTACATGTGTGTATATACTCAGGATTATGGAATAGAATCCTTCAATGGCTACAGGGACAACCTCCGGGATCACAAAGCTGGGAGCTTACACTTCCAATGGATATTAGGGAATACTATAGGGAATTTTAGAGCTGCACAAGCGTTTAAAATGATATATGCTAAATGTGTCAATTACATTGTTTGACGAAATTATATTTTATTAAAATGATGTCAAGAATCTTAAAACGAGAGCTAGATTAGAATTTTATTCATGCTCTCAAAAGAAGAAGAAAAAGGTTGAAAGTTGTTTTATATTTATTAAGTACTTTTGCTCAATATTGTTAATAATATATTTTTATTATATTATTATATAC</genome_strand>
        <mrna_strand>AATAGTGGTCAGTCTGTTAGAGTGCCATAGATTGCAGTAATTTAGTTAGAGCTAGGATGATATTTCTATTATCAGAACAAACAATCTGAAGCTTATTGGTGAATTGCCTAGTGTAACATGGACCCAATCTGACTGTTAACAATAGTGCCAGATTTATAGCCATGTTTACACTATGGTTGATGCTGCAGGGTGGCTGTTAACTGCCACTGCTTGGTAGATGGTGGTGGATTAGACATGTGCTTGTGCCAGCAACGTGAAGAAAACAACGAACATATTTTGCTACATGTGTGTATATACTCAGGATTATGGAATAGAATCCTTCAATGGCTACAGGGACAACCTCCGGGATCACAAAGCTGGGAGCTTACACTTCCAATGGATATTAGGGAATACTATAGGGAATTTTAGAGCTGCACAAGCGTTTAAAATGATATATGCTAAATGTGTCAATTACATTGTTTGACGAAATTATATTTTATTAAAATGATGTCAAGAATCTTAAAACGAGAGCTAGATTAGAATTTTATTCATGCTCTCAAAAGAAGAAGAAAAAGGTTGAAAGTTGTTTTATATTTATTAAGTACTTTTGCTCAATATTGNTAATAATATATTTTTATTATATTAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E392718" ref_strand="+" ref_description="SGN-E392718 [TUS-37-F15]">
      <seq>taatagtggtcagtctgttagagtgccatagattgcagtaatttagttagagctaggatgatatttctattatcagaacaaacaatctgaagcttattggtgaattgcctagtgtaacatggacccaatctgactgttaacaatagtgccagatttatagccatgtttacactatggttgatgctgcagggtggctgttaactgccactgcttggtatatggtggtggattagacatgtgcttgtgccagcaacgtgaagaaaacaacgaacatattttgctacgtgtgtgtattttctcaggattatggaatagaatccttcgatggctacggggacaacctccgggatcacaaagctggcagcttacacttccgatggatat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="3731" stop="2748"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3431" g_stop="3048" g_length="384"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="384" r_length="384" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-E392718" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>384</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E392718" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3431" e_stop="3048"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAATAGTGGTCAGTCTGTTAGAGTGCCATAGATTGCAGTAATTTAGTTAGAGCTAGGATGATATTTCTATTATCAGAACAAACAATCTGAAGCTTATTGGTGAATTGCCTAGTGTAACATGGACCCAATCTGACTGTTAACAATAGTGCCAGATTTATAGCCATGTTTACACTATGGTTGATGCTGCAGGGTGGCTGTTAACTGCCACTGCTTGGTAGATGGTGGTGGATTAGACATGTGCTTGTGCCAGCAACGTGAAGAAAACAACGAACATATTTTGCTACATGTGTGTATATACTCAGGATTATGGAATAGAATCCTTCAATGGCTACAGGGACAACCTCCGGGATCACAAAGCTGGGAGCTTACACTTCCAATGGATAT</genome_strand>
        <mrna_strand>TAATAGTGGTCAGTCTGTTAGAGTGCCATAGATTGCAGTAATTTAGTTAGAGCTAGGATGATATTTCTATTATCAGAACAAACAATCTGAAGCTTATTGGTGAATTGCCTAGTGTAACATGGACCCAATCTGACTGTTAACAATAGTGCCAGATTTATAGCCATGTTTACACTATGGTTGATGCTGCAGGGTGGCTGTTAACTGCCACTGCTTGGTATATGGTGGTGGATTAGACATGTGCTTGTGCCAGCAACGTGAAGAAAACAACGAACATATTTTGCTACGTGTGTGTATTTTCTCAGGATTATGGAATAGAATCCTTCGATGGCTACGGGGACAACCTCCGGGATCACAAAGCTGGCAGCTTACACTTCCGATGGATAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E393061" ref_strand="+" ref_description="SGN-E393061 [TUS-37-F14]">
      <seq>taatagtggtcagtctgttagagtgccatagattgcagtaatttagttagagctaggatgatatttctattatcagaacaaacaatctgaagcttattggtgaattgcctagtgtaacatggacccaatctgactgttaacaatagtgccagatttatagccatgtttacactatggttgatgctgcagggtggctgttaactgccactgcttggtagatggtggtggatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="3731" stop="2901"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3431" g_stop="3201" g_length="231"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="231" r_length="231" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-E393061" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>231</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E393061" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3431" e_stop="3201"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAATAGTGGTCAGTCTGTTAGAGTGCCATAGATTGCAGTAATTTAGTTAGAGCTAGGATGATATTTCTATTATCAGAACAAACAATCTGAAGCTTATTGGTGAATTGCCTAGTGTAACATGGACCCAATCTGACTGTTAACAATAGTGCCAGATTTATAGCCATGTTTACACTATGGTTGATGCTGCAGGGTGGCTGTTAACTGCCACTGCTTGGTAGATGGTGGTGGATT</genome_strand>
        <mrna_strand>TAATAGTGGTCAGTCTGTTAGAGTGCCATAGATTGCAGTAATTTAGTTAGAGCTAGGATGATATTTCTATTATCAGAACAAACAATCTGAAGCTTATTGGTGAATTGCCTAGTGTAACATGGACCCAATCTGACTGTTAACAATAGTGCCAGATTTATAGCCATGTTTACACTATGGTTGATGCTGCAGGGTGGCTGTTAACTGCCACTGCTTGGTAGATGGTGGTGGATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E372270" ref_strand="+" ref_description="SGN-E372270 [TUS-30-L19]">
      <seq>ggggagctaatacctatggtccaatctgatctctgttgtttttggttaaaatccttatcccatctttcagaattagaaaggaaatttcagttgttcgggcttactctttctggaaatgcagctggggaaattatgacagctgatcagattgaaaatgttattggggccgccaacaagctttgttctttagaggaatcttttgatgcctctgtttctggtcttgcttttagttttcagagatggtttattactttaagatcaaaggttgttcgaactgtggcagatgtactaaaattattgagcatgaatttgctttcacaagatgccaccagtacaaaacaaatagaggcgaggattttggtttggcactcaaattcttctaaaggactcagctcattgttgcaactgcttgcccatgcttcttcccagttcatgatgctagtaaaggaatttgatctcttagcagcgtcattcattgtcatggacaggaaaagtatgaagatagtttctgatcttggattgagttgttcactgttagcttttagtactggattgacattacgtttggccagtttccgtggtaaacaaaattgtagtacttatggtcttgaaactacagacgagcaatttcatgctcagctagttcatgacttttgtagaagacttgggtttacagacatagagactagcaaaaatctgcggcatcttttggatttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="5566" stop="4250"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="5266" g_stop="4550" g_length="717"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="717" r_length="717" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-E372270" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>717</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E372270" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="5266" e_stop="4550"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGGAGCTAATACCTATGGTCCAATCTGATCTCTGTTGTTTTTGGTTAAAATCCTTATCCCATCTTTCAGAATTAGAAAGGAAATTTCAGTTGTTCGGGCTTACTCTTTCTGGAAATGCAGCTGGGGAAATTATGACAGCTGATCAGATTGAAAATGTTATTGGGGCCGCCAACAAGCTTTGTTCTTTAGAGGAATCTTTTGATGCCTCTGTTTCTGGTCTTGCTTTTAGTTTTCAGAGATGGTTTATTACTTTAAGATCAAAGGTTGTTCGAACTGTGGCAGATGTACTAAAATTATTGAGCATGAATTTGCTTTCACAAGATGCCACCAGTACAAAACAAATAGAGGCGAGGATTTTGGTTTGGCACTCAAATTCTTCTAAAGGACTCAGCTCATTGTTGCAACTGCTTGCCCATGCTTCTTCCCAGTTCATGATGCTAGTAAAGGAATTTGATCTCTTAGCAGCGTCATTCATTGTCATGGACAGGAAAAGTATGAAGATAGTTTCTGATCTTGGATTGAGTTGTTCACTGTTAGCTTTTAGTACTGGATTGACATTACGTTTGGCCAGTTTCCGTGGTAAACAAAATTGTAGTACTTATGGTCTTGAAACTACAGACGAGCAATTTCATGCTCAGCTAGTTCATGACTTGTTAAGAAGACTTGGGTTTACAGACATAGAGACTAGCAAAAATCTGCGGCATCTTTTGGATTTC</genome_strand>
        <mrna_strand>GGGGAGCTAATACCTATGGTCCAATCTGATCTCTGTTGTTTTTGGTTAAAATCCTTATCCCATCTTTCAGAATTAGAAAGGAAATTTCAGTTGTTCGGGCTTACTCTTTCTGGAAATGCAGCTGGGGAAATTATGACAGCTGATCAGATTGAAAATGTTATTGGGGCCGCCAACAAGCTTTGTTCTTTAGAGGAATCTTTTGATGCCTCTGTTTCTGGTCTTGCTTTTAGTTTTCAGAGATGGTTTATTACTTTAAGATCAAAGGTTGTTCGAACTGTGGCAGATGTACTAAAATTATTGAGCATGAATTTGCTTTCACAAGATGCCACCAGTACAAAACAAATAGAGGCGAGGATTTTGGTTTGGCACTCAAATTCTTCTAAAGGACTCAGCTCATTGTTGCAACTGCTTGCCCATGCTTCTTCCCAGTTCATGATGCTAGTAAAGGAATTTGATCTCTTAGCAGCGTCATTCATTGTCATGGACAGGAAAAGTATGAAGATAGTTTCTGATCTTGGATTGAGTTGTTCACTGTTAGCTTTTAGTACTGGATTGACATTACGTTTGGCCAGTTTCCGTGGTAAACAAAATTGTAGTACTTATGGTCTTGAAACTACAGACGAGCAATTTCATGCTCAGCTAGTTCATGACTTTTGTAGAAGACTTGGGTTTACAGACATAGAGACTAGCAAAAATCTGCGGCATCTTTTGGATTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E287203" ref_strand="+" ref_description="SGN-E287203 [cLES-6-F10]">
      <seq>ggggagctaatacctatggtccaatctgatctctgttgtttttggttaaaatccttatcccatctttcagaattagaaaggaaatttcagttgttcgggcttactctttctggaaatgcagctggggaaattatgacagctgatcagattgaaaatgttattggggccgccaacaagctttgttctttagaggaatcttttgatgcctctgtttctggtcttgcttttagttttcagagatggtttattactttaagatcaaaggttgttcgaactgtggcagatgtactaaaattattgagcatgaatttgctttcacaagatgccaccagtacaaaacaaatagaggcgaggattttggtttggcactcaaattcttctaaaggactcagctcattgttgcaactgcttgcccatgcttcttcccagttcatgatgctagtaaaggaatttgatctcttagcagcgtcattcattgtcatggacaggaaaagtatgaagatagtttctgatcttgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="5566" stop="4448"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="5266" g_stop="4748" g_length="519"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="519" r_length="519" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-E287203" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>519</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E287203" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="5266" e_stop="4748"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGGAGCTAATACCTATGGTCCAATCTGATCTCTGTTGTTTTTGGTTAAAATCCTTATCCCATCTTTCAGAATTAGAAAGGAAATTTCAGTTGTTCGGGCTTACTCTTTCTGGAAATGCAGCTGGGGAAATTATGACAGCTGATCAGATTGAAAATGTTATTGGGGCCGCCAACAAGCTTTGTTCTTTAGAGGAATCTTTTGATGCCTCTGTTTCTGGTCTTGCTTTTAGTTTTCAGAGATGGTTTATTACTTTAAGATCAAAGGTTGTTCGAACTGTGGCAGATGTACTAAAATTATTGAGCATGAATTTGCTTTCACAAGATGCCACCAGTACAAAACAAATAGAGGCGAGGATTTTGGTTTGGCACTCAAATTCTTCTAAAGGACTCAGCTCATTGTTGCAACTGCTTGCCCATGCTTCTTCCCAGTTCATGATGCTAGTAAAGGAATTTGATCTCTTAGCAGCGTCATTCATTGTCATGGACAGGAAAAGTATGAAGATAGTTTCTGATCTTGGA</genome_strand>
        <mrna_strand>GGGGAGCTAATACCTATGGTCCAATCTGATCTCTGTTGTTTTTGGTTAAAATCCTTATCCCATCTTTCAGAATTAGAAAGGAAATTTCAGTTGTTCGGGCTTACTCTTTCTGGAAATGCAGCTGGGGAAATTATGACAGCTGATCAGATTGAAAATGTTATTGGGGCCGCCAACAAGCTTTGTTCTTTAGAGGAATCTTTTGATGCCTCTGTTTCTGGTCTTGCTTTTAGTTTTCAGAGATGGTTTATTACTTTAAGATCAAAGGTTGTTCGAACTGTGGCAGATGTACTAAAATTATTGAGCATGAATTTGCTTTCACAAGATGCCACCAGTACAAAACAAATAGAGGCGAGGATTTTGGTTTGGCACTCAAATTCTTCTAAAGGACTCAGCTCATTGTTGCAACTGCTTGCCCATGCTTCTTCCCAGTTCATGATGCTAGTAAAGGAATTTGATCTCTTAGCAGCGTCATTCATTGTCATGGACAGGAAAAGTATGAAGATAGTTTCTGATCTTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E208700" ref_strand="+" ref_description="SGN-E208700 [cLEC-39-B18]">
      <seq>aattcttattattgatcgtgtgaagcacattttggttaaaaaggattattggttgtcttataagctggcaaaatatgcggcatgcaatggtgcatggttagtaactgcttacatatttggggagctaatacctatggtccaatctgatctctgttgattttggttaaaatccttatcccatctttcagaattagaaaggaaatttcagttgttcgggcttactctttctggaaatgcacctggggaaattatgacagctgatcagattgaaaatgttattgaggccgccaacaagctttgttctttagaggaatctttcgatgcctctgattctggacttgcttttag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="5684" stop="4737"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="5384" g_stop="5037" g_length="348"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="348" r_length="348" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-E208700" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>348</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E208700" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="5384" e_stop="5037"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTCTCATTATTGATCGTGTGAAGCAAATTTTGGTTAAAAAGGATTATTGGTTGTCTTATAAGCTGGCAAAATATGCGGCATGCAATGGTGCATGGTTAGTAGCTGCTTACATATTTGGGGAGCTAATACCTATGGTCCAATCTGATCTCTGTTGTTTTTGGTTAAAATCCTTATCCCATCTTTCAGAATTAGAAAGGAAATTTCAGTTGTTCGGGCTTACTCTTTCTGGAAATGCAGCTGGGGAAATTATGACAGCTGATCAGATTGAAAATGTTATTGGGGCCGCCAACAAGCTTTGTTCTTTAGAGGAATCTTTTGATGCCTCTGTTTCTGGTCTTGCTTTTAG</genome_strand>
        <mrna_strand>AATTCTTATTATTGATCGTGTGAAGCACATTTTGGTTAAAAAGGATTATTGGTTGTCTTATAAGCTGGCAAAATATGCGGCATGCAATGGTGCATGGTTAGTAACTGCTTACATATTTGGGGAGCTAATACCTATGGTCCAATCTGATCTCTGTTGATTTTGGTTAAAATCCTTATCCCATCTTTCAGAATTAGAAAGGAAATTTCAGTTGTTCGGGCTTACTCTTTCTGGAAATGCACCTGGGGAAATTATGACAGCTGATCAGATTGAAAATGTTATTGAGGCCGCCAACAAGCTTTGTTCTTTAGAGGAATCTTTCGATGCCTCTGATTCTGGACTTGCTTTTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E329408" ref_strand="+" ref_description="SGN-E329408 [cTOD-2-J2]">
      <seq>atctacaggcaaaggcttctttgtttgcagccggatgcgtttctgaactggcagatgattttgcttatgtatttctggagatgcttggaggtctgttggtctcatctgaaacatcaagggctataaggttagctggaggacgtgcttttgctaaaatgtggtgcccaattttactagcagatatagctcataaggttcagtatttctctttaatatgagtttctgccaccaaatacatgtaaattttcttattgcacctgtgactcattccatggaccccctatccttctgtccctttccgctctattctaaaagaacttgttttttgaaaaagcactgttcagaaaccatgtaaatactcatatagatgacaaaattatgcatagtgaaatgcaatgtttttctttttcatgcatgacatgcaagtgatcatctctgaactaattgtgactattgctctagtttttgttacaagttcctcaaaataagtttttaatgataccaggccgatctgtattgtctgacaatttgcttaaatgatgaagaagtgagttcagatttctattgcagcactaaaattgactttttcatattgcagactggtgtgaagctta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="9878" stop="8665"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9578" g_stop="8965" g_length="614"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="614" r_length="614" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-E329408" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>614</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E329408" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9578" e_stop="8965"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTACAGGCAAAGGCTTCTTTGTTTGCAGCCGGATGCTTTTCTGAACTGGCAGATGATTTTGCTTATGTATTTCTGGAGATGCTTGGAGGTCTGTTGGTCTCATCTGAAACATCAAGGGCTATAAGGTTAGCTGGAGGACGTGCTTTTGCTAAAATGTGGTGCCCAATTTTACTAGCAGATATAGCTCATAAGGTTCAGTATTTCTCTTTAATATGAGTTTCTGCCACCAAATACATGTAAATTTTCTTATTGCACCTGTGACTCATTCCATGGACCCCCTATCCTTCTGTCCCTTTCCGCTCTATTCTAAAAGAACTTGTTTTTTGAAAAAGCACTGTTCAGAAACCATGTAAATACTCATATAGATGACAAAATTATGCATAGTGAAATGCAATGTTTTTCTTTTTCATGCATGACATGCAAGTGATCATCTCTGAACTAATTGTGACTATTGCTCTAGTTTTTGTTACAAGTTCCTCAAAATAAGTTTTTAATGATACCAGGCCGATCTGTATTGTCTGACAATTTGCTTAAATGATGAAGAAGTGAGTTCAGATTTCTATTGCAGCACTAAAATTGACTTTTTCATATTGCAGACTGGTGTGAAGCTTA</genome_strand>
        <mrna_strand>ATCTACAGGCAAAGGCTTCTTTGTTTGCAGCCGGATGCGTTTCTGAACTGGCAGATGATTTTGCTTATGTATTTCTGGAGATGCTTGGAGGTCTGTTGGTCTCATCTGAAACATCAAGGGCTATAAGGTTAGCTGGAGGACGTGCTTTTGCTAAAATGTGGTGCCCAATTTTACTAGCAGATATAGCTCATAAGGTTCAGTATTTCTCTTTAATATGAGTTTCTGCCACCAAATACATGTAAATTTTCTTATTGCACCTGTGACTCATTCCATGGACCCCCTATCCTTCTGTCCCTTTCCGCTCTATTCTAAAAGAACTTGTTTTTTGAAAAAGCACTGTTCAGAAACCATGTAAATACTCATATAGATGACAAAATTATGCATAGTGAAATGCAATGTTTTTCTTTTTCATGCATGACATGCAAGTGATCATCTCTGAACTAATTGTGACTATTGCTCTAGTTTTTGTTACAAGTTCCTCAAAATAAGTTTTTAATGATACCAGGCCGATCTGTATTGTCTGACAATTTGCTTAAATGATGAAGAAGTGAGTTCAGATTTCTATTGCAGCACTAAAATTGACTTTTTCATATTGCAGACTGGTGTGAAGCTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E347313" ref_strand="+" ref_description="SGN-E347313 [cTOF-33-K15]">
      <seq>aatagtggtcagtctgttagagtgccatagattgcagtaatttagttagagctaggatgatatttctattatcagaacaaacaatctgaagcttattggtgaattgcctagtgtaacatggacccaatctgactgttaacaatagtgccagatttatagccatgtttacactatggttgatgctgcagggtggctgttaactgccactgcttggtagatggtggtggattagacatgtgcttgtgccagcaacgtgaagaaaacaacgaacatattttgctacatgtgtgtatatactcaggattatggaatagaatccttcaatggctacagggacaacctccgggatcacaaagctgggagcttacacttccaatggatattagggaatactatagggaattttagagctgcacaagcgtttaaaatgatatatgctaaatgtgtcaattacattgtttgacgaaattatattttattaaaatgatgtcaagaatcttaaaacgagagctagattagaattttattcatgctctcaaaagaagaagaaaaaggttgaaagttgttttatatttattaagtacttttgctcaatattgttaataatatatttttattatattaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="15334" stop="14104"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15034" g_stop="14402" g_length="633"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="633" r_length="633" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-E347313" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>633</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E347313" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15034" e_stop="14402"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATAGTGGTCAGTCTGTTAGAGTGCCATAGATTGCAGTAATTTAGTTAGAGCTAGGATGATATTTCTATTATCAGAACAAACAATCTGAAGCTTATTGGTGAATTGCCTAGTGTAACATGGACCCAATCTGACTGTTAACAATAGTGCCAGATTTATAGCCATGTTTACACTATGGTTGATGCTGCAGGGTGGCTGTTAACTGCCACTGCTTGGTAGATGGTGGTGGATTAGACATGTGCTTGTGCCAGCAACGTGAAGAAAACAACGAACATATTTTGCTACATGTGTGTATATACTCAGGATTATGGAATAGAATCCTTCAATGGCTACAGGGACAACCTCCGGGATCACAAAGCTGGGAGCTTACACTTCCAATGGATATTAGGGAATACTATAGGGAATTTTAGAGCTGCACAAGCGTTTAAAATGATATATGCTAAATGTGTCAATTACATTGTTTGACGAAATTATATTTTATTAAAATGATGTCAAGAATCTTAAAACGAGAGCTAGATTAGAATTTTATTCATGCTCTCAAAAGAAGAAGAAAAAGGTTGAAAGTTGTTTTATATTTATTAAGTACTTTTGCTCAATATTGTTAATAATATATTTTTATTATATTATTATATACT</genome_strand>
        <mrna_strand>AATAGTGGTCAGTCTGTTAGAGTGCCATAGATTGCAGTAATTTAGTTAGAGCTAGGATGATATTTCTATTATCAGAACAAACAATCTGAAGCTTATTGGTGAATTGCCTAGTGTAACATGGACCCAATCTGACTGTTAACAATAGTGCCAGATTTATAGCCATGTTTACACTATGGTTGATGCTGCAGGGTGGCTGTTAACTGCCACTGCTTGGTAGATGGTGGTGGATTAGACATGTGCTTGTGCCAGCAACGTGAAGAAAACAACGAACATATTTTGCTACATGTGTGTATATACTCAGGATTATGGAATAGAATCCTTCAATGGCTACAGGGACAACCTCCGGGATCACAAAGCTGGGAGCTTACACTTCCAATGGATATTAGGGAATACTATAGGGAATTTTAGAGCTGCACAAGCGTTTAAAATGATATATGCTAAATGTGTCAATTACATTGTTTGACGAAATTATATTTTATTAAAATGATGTCAAGAATCTTAAAACGAGAGCTAGATTAGAATTTTATTCATGCTCTCAAAAGAAGAAGAAAAAGGTTGAAAGTTGTTTTATATTTATTAAGTACTTTTGCTCAATATTGTTAATAATATATTTTTATTATATTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E393060" ref_strand="+" ref_description="SGN-E393060 [TUS-37-F14](-)">
      <seq>cttggtagatggtggtggattagacatgtgcttgtgccagcaacgtgaagaaaacaacgaacatattttgctacatgtgtgtatatactcaggattatggaatagaatccttcaatggctacagggacaacctccgggatcacaaagctgggagcttacacttccaatggatattagggaatactatagggaattttagagctgcacaagcgtttaaaatgatatatgctaaatgtgtcaattacattgtttgacgaaattatattttattaaaatgatgtcaagaatcttaaaacgagagctagattagaattttattcatgctctcaaaagaagaagaaaaaggttgaaagttgttttatatttattaagtacttttgctcaatattgttaataatatatttttattatattaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="15125" stop="14104"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14825" g_stop="14402" g_length="424"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="424" r_length="424" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-E393060" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>424</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E393060" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14825" e_stop="14402"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGGTAGATGGTGGTGGATTAGACATGTGCTTGTGCCAGCAACGTGAAGAAAACAACGAACATATTTTGCTACATGTGTGTATATACTCAGGATTATGGAATAGAATCCTTCAATGGCTACAGGGACAACCTCCGGGATCACAAAGCTGGGAGCTTACACTTCCAATGGATATTAGGGAATACTATAGGGAATTTTAGAGCTGCACAAGCGTTTAAAATGATATATGCTAAATGTGTCAATTACATTGTTTGACGAAATTATATTTTATTAAAATGATGTCAAGAATCTTAAAACGAGAGCTAGATTAGAATTTTATTCATGCTCTCAAAAGAAGAAGAAAAAGGTTGAAAGTTGTTTTATATTTATTAAGTACTTTTGCTCAATATTGTTAATAATATATTTTTATTATATTATTATATACT</genome_strand>
        <mrna_strand>CTTGGTAGATGGTGGTGGATTAGACATGTGCTTGTGCCAGCAACGTGAAGAAAACAACGAACATATTTTGCTACATGTGTGTATATACTCAGGATTATGGAATAGAATCCTTCAATGGCTACAGGGACAACCTCCGGGATCACAAAGCTGGGAGCTTACACTTCCAATGGATATTAGGGAATACTATAGGGAATTTTAGAGCTGCACAAGCGTTTAAAATGATATATGCTAAATGTGTCAATTACATTGTTTGACGAAATTATATTTTATTAAAATGATGTCAAGAATCTTAAAACGAGAGCTAGATTAGAATTTTATTCATGCTCTCAAAAGAAGAAGAAAAAGGTTGAAAGTTGTTTTATATTTATTAAGTACTTTTGCTCAATATTGTTAATAATATATTTTTATTATATTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E392911" ref_strand="+" ref_description="SGN-E392911 [TUS-37-F15](-)">
      <seq>ctcaggattatggaatagaatccttcaatggctacagggacaacctccgggatcacaaagctgggagcttacacttccaatggatattagggaatactatagggaattttagagctgcacaagcgtttaaaatgatatatgctaaatgtgtcaattacattgtttgacgaaattatattttattaaaatgatgtcaagaatcttaaaacgagagctagattagaattttattcatgctctcaaaagaagaagaaaaaggttgaaagttgttttatatttattaagtacttttgctcaatattgttaataatatatttttattatattaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="15038" stop="14104"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14738" g_stop="14402" g_length="337"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="337" r_length="337" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-E392911" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>337</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E392911" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14738" e_stop="14402"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCAGGATTATGGAATAGAATCCTTCAATGGCTACAGGGACAACCTCCGGGATCACAAAGCTGGGAGCTTACACTTCCAATGGATATTAGGGAATACTATAGGGAATTTTAGAGCTGCACAAGCGTTTAAAATGATATATGCTAAATGTGTCAATTACATTGTTTGACGAAATTATATTTTATTAAAATGATGTCAAGAATCTTAAAACGAGAGCTAGATTAGAATTTTATTCATGCTCTCAAAAGAAGAAGAAAAAGGTTGAAAGTTGTTTTATATTTATTAAGTACTTTTGCTCAATATTGTTAATAATATATTTTTATTATATTATTATATACT</genome_strand>
        <mrna_strand>CTCAGGATTATGGAATAGAATCCTTCAATGGCTACAGGGACAACCTCCGGGATCACAAAGCTGGGAGCTTACACTTCCAATGGATATTAGGGAATACTATAGGGAATTTTAGAGCTGCACAAGCGTTTAAAATGATATATGCTAAATGTGTCAATTACATTGTTTGACGAAATTATATTTTATTAAAATGATGTCAAGAATCTTAAAACGAGAGCTAGATTAGAATTTTATTCATGCTCTCAAAAGAAGAAGAAAAAGGTTGAAAGTTGTTTTATATTTATTAAGTACTTTTGCTCAATATTGTTAATAATATATTTTTATTATATTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E372269" ref_strand="+" ref_description="SGN-E372269 [TUS-30-L19](-)">
      <seq>ggttcttaccaaatcaaatggcacagctgttgtatagacaaaaatggtgcttactggagccttatgcccctgaacactaatcagttcttcactgtacaggaatcttttaatagtggtcagtctgttagagtgccatagattgcagtaatttagttagagctaggatgatatttctattatcagaacaaacaatctgaagcttattggtgaattgcctagtgtaacatggacccaatctgactgttaacaatagtgccagatttatagccatgtttacactatggttgatgctgcagggtggctgttaactgccactgcttggtagatggtggtggattagacatgtgcttgtgccagcaacgtgaagaaaacaacgaacatattttgctacatgtgtgtatatactcaggattatggaatagaatccttcaatggctacagggacaacctccgggatcacaaagctgggagcttacacttccaatggatattagggaatactatagggaattttagagctgcacaagcgtttaaaatgatatatgctaaatgtgtcaattacattgtttgacgaaattatattttattaaaatgatgtcaagaatcttaaaacgagagctagattagaattttattcatgctctcaaaagaagaagaaaaaggttgaaagttgttttatatttattaagtacttttgctcaatattgttaataatatatttttattatattaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="15442" stop="14104"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15142" g_stop="14403" g_length="740"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="740" r_length="740" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-E372269" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>740</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E372269" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15142" e_stop="14403"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTTCTTACCAAATCAAATGGCACAGCTGTTGTATAGACAAAAATGGTGCTTACTGGAGCCTTATGCCCCTGAACACTAATCAGTTCTTCACTGTACAGGAATCTTTTAATAGTGGTCAGTCTGTTAGAGTGCCATAGATTGCAGTAATTTAGTTAGAGCTAGGATGATATTTCTATTATCAGAACAAACAATCTGAAGCTTATTGGTGAATTGCCTAGTGTAACATGGACCCAATCTGACTGTTAACAATAGTGCCAGATTTATAGCCATGTTTACACTATGGTTGATGCTGCAGGGTGGCTGTTAACTGCCACTGCTTGGTAGATGGTGGTGGATTAGACATGTGCTTGTGCCAGCAACGTGAAGAAAACAACGAACATATTTTGCTACATGTGTGTATATACTCAGGATTATGGAATAGAATCCTTCAATGGCTACAGGGACAACCTCCGGGATCACAAAGCTGGGAGCTTACACTTCCAATGGATATTAGGGAATACTATAGGGAATTTTAGAGCTGCACAAGCGTTTAAAATGATATATGCTAAATGTGTCAATTACATTGTTTGACGAAATTATATTTTATTAAAATGATGTCAAGAATCTTAAAACGAGAGCTAGATTAGAATTTTATTCATGCTCTCAAAAGAAGAAGAAAAAGGTTGAAAGTTGTTTTATATTTATTAAGTACTTTTGCTCAATATTGTTAATAATATATTTTTATTATATTATTATATAC</genome_strand>
        <mrna_strand>GGTTCTTACCAAATCAAATGGCACAGCTGTTGTATAGACAAAAATGGTGCTTACTGGAGCCTTATGCCCCTGAACACTAATCAGTTCTTCACTGTACAGGAATCTTTTAATAGTGGTCAGTCTGTTAGAGTGCCATAGATTGCAGTAATTTAGTTAGAGCTAGGATGATATTTCTATTATCAGAACAAACAATCTGAAGCTTATTGGTGAATTGCCTAGTGTAACATGGACCCAATCTGACTGTTAACAATAGTGCCAGATTTATAGCCATGTTTACACTATGGTTGATGCTGCAGGGTGGCTGTTAACTGCCACTGCTTGGTAGATGGTGGTGGATTAGACATGTGCTTGTGCCAGCAACGTGAAGAAAACAACGAACATATTTTGCTACATGTGTGTATATACTCAGGATTATGGAATAGAATCCTTCAATGGCTACAGGGACAACCTCCGGGATCACAAAGCTGGGAGCTTACACTTCCAATGGATATTAGGGAATACTATAGGGAATTTTAGAGCTGCACAAGCGTTTAAAATGATATATGCTAAATGTGTCAATTACATTGTTTGACGAAATTATATTTTATTAAAATGATGTCAAGAATCTTAAAACGAGAGCTAGATTAGAATTTTATTCATGCTCTCAAAAGAAGAAGAAAAAGGTTGAAAGTTGTTTTATATTTATTAAGTACTTTTGCTCAATATTGTTAATAATATATTTTTATTATATTAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E342071" ref_strand="+" ref_description="SGN-E342071 [cTOF-10-D12]">
      <seq>aatagtggtcagtctgttagagtgccatagattgcagtaatttagttagagctaggatgatatttctattatcagaacaaacaatctgaagcttattggtgaattgcctagtgtaacatggacccaatctgactgttaacaatagtgccagatttatagccatgtttacactatggttgatgctgcagggtggctgttaactgccactgcttggtagatggtggtggattagacatgtgcttgtgccagcaacgtgaagaaaacaacgaacatattttgctacatgtgtgtatatactcaggattatggaatagaatccttcaatggctacagggacaacctccgggatcacaaagctgggagcttacacttccaatggatattagggaatactatagggaattttagagctgcacaagcgtttaaaatgatatatgctaaatgtgtcaattacattgtttgacgaaattatattttattaaaatgatgtcaagaatcttaaaacgagagctagattagaattttattcatgctctcaaaagaagaagaaaaaggttgaaagttgttttatatttattaagtacttttgctcaatattgntaataatatatttttattatattaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="15334" stop="14104"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15034" g_stop="14403" g_length="632"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="632" r_length="632" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-E342071" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>632</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E342071" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15034" e_stop="14403"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATAGTGGTCAGTCTGTTAGAGTGCCATAGATTGCAGTAATTTAGTTAGAGCTAGGATGATATTTCTATTATCAGAACAAACAATCTGAAGCTTATTGGTGAATTGCCTAGTGTAACATGGACCCAATCTGACTGTTAACAATAGTGCCAGATTTATAGCCATGTTTACACTATGGTTGATGCTGCAGGGTGGCTGTTAACTGCCACTGCTTGGTAGATGGTGGTGGATTAGACATGTGCTTGTGCCAGCAACGTGAAGAAAACAACGAACATATTTTGCTACATGTGTGTATATACTCAGGATTATGGAATAGAATCCTTCAATGGCTACAGGGACAACCTCCGGGATCACAAAGCTGGGAGCTTACACTTCCAATGGATATTAGGGAATACTATAGGGAATTTTAGAGCTGCACAAGCGTTTAAAATGATATATGCTAAATGTGTCAATTACATTGTTTGACGAAATTATATTTTATTAAAATGATGTCAAGAATCTTAAAACGAGAGCTAGATTAGAATTTTATTCATGCTCTCAAAAGAAGAAGAAAAAGGTTGAAAGTTGTTTTATATTTATTAAGTACTTTTGCTCAATATTGTTAATAATATATTTTTATTATATTATTATATAC</genome_strand>
        <mrna_strand>AATAGTGGTCAGTCTGTTAGAGTGCCATAGATTGCAGTAATTTAGTTAGAGCTAGGATGATATTTCTATTATCAGAACAAACAATCTGAAGCTTATTGGTGAATTGCCTAGTGTAACATGGACCCAATCTGACTGTTAACAATAGTGCCAGATTTATAGCCATGTTTACACTATGGTTGATGCTGCAGGGTGGCTGTTAACTGCCACTGCTTGGTAGATGGTGGTGGATTAGACATGTGCTTGTGCCAGCAACGTGAAGAAAACAACGAACATATTTTGCTACATGTGTGTATATACTCAGGATTATGGAATAGAATCCTTCAATGGCTACAGGGACAACCTCCGGGATCACAAAGCTGGGAGCTTACACTTCCAATGGATATTAGGGAATACTATAGGGAATTTTAGAGCTGCACAAGCGTTTAAAATGATATATGCTAAATGTGTCAATTACATTGTTTGACGAAATTATATTTTATTAAAATGATGTCAAGAATCTTAAAACGAGAGCTAGATTAGAATTTTATTCATGCTCTCAAAAGAAGAAGAAAAAGGTTGAAAGTTGTTTTATATTTATTAAGTACTTTTGCTCAATATTGNTAATAATATATTTTTATTATATTAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E392718" ref_strand="+" ref_description="SGN-E392718 [TUS-37-F15]">
      <seq>taatagtggtcagtctgttagagtgccatagattgcagtaatttagttagagctaggatgatatttctattatcagaacaaacaatctgaagcttattggtgaattgcctagtgtaacatggacccaatctgactgttaacaatagtgccagatttatagccatgtttacactatggttgatgctgcagggtggctgttaactgccactgcttggtatatggtggtggattagacatgtgcttgtgccagcaacgtgaagaaaacaacgaacatattttgctacgtgtgtgtattttctcaggattatggaatagaatccttcgatggctacggggacaacctccgggatcacaaagctggcagcttacacttccgatggatat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="15335" stop="14352"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15035" g_stop="14652" g_length="384"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="384" r_length="384" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-E392718" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>384</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E392718" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15035" e_stop="14652"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAATAGTGGTCAGTCTGTTAGAGTGCCATAGATTGCAGTAATTTAGTTAGAGCTAGGATGATATTTCTATTATCAGAACAAACAATCTGAAGCTTATTGGTGAATTGCCTAGTGTAACATGGACCCAATCTGACTGTTAACAATAGTGCCAGATTTATAGCCATGTTTACACTATGGTTGATGCTGCAGGGTGGCTGTTAACTGCCACTGCTTGGTAGATGGTGGTGGATTAGACATGTGCTTGTGCCAGCAACGTGAAGAAAACAACGAACATATTTTGCTACATGTGTGTATATACTCAGGATTATGGAATAGAATCCTTCAATGGCTACAGGGACAACCTCCGGGATCACAAAGCTGGGAGCTTACACTTCCAATGGATAT</genome_strand>
        <mrna_strand>TAATAGTGGTCAGTCTGTTAGAGTGCCATAGATTGCAGTAATTTAGTTAGAGCTAGGATGATATTTCTATTATCAGAACAAACAATCTGAAGCTTATTGGTGAATTGCCTAGTGTAACATGGACCCAATCTGACTGTTAACAATAGTGCCAGATTTATAGCCATGTTTACACTATGGTTGATGCTGCAGGGTGGCTGTTAACTGCCACTGCTTGGTATATGGTGGTGGATTAGACATGTGCTTGTGCCAGCAACGTGAAGAAAACAACGAACATATTTTGCTACGTGTGTGTATTTTCTCAGGATTATGGAATAGAATCCTTCGATGGCTACGGGGACAACCTCCGGGATCACAAAGCTGGCAGCTTACACTTCCGATGGATAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E393061" ref_strand="+" ref_description="SGN-E393061 [TUS-37-F14]">
      <seq>taatagtggtcagtctgttagagtgccatagattgcagtaatttagttagagctaggatgatatttctattatcagaacaaacaatctgaagcttattggtgaattgcctagtgtaacatggacccaatctgactgttaacaatagtgccagatttatagccatgtttacactatggttgatgctgcagggtggctgttaactgccactgcttggtagatggtggtggatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="15335" stop="14505"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15035" g_stop="14805" g_length="231"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="231" r_length="231" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-E393061" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>231</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E393061" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15035" e_stop="14805"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAATAGTGGTCAGTCTGTTAGAGTGCCATAGATTGCAGTAATTTAGTTAGAGCTAGGATGATATTTCTATTATCAGAACAAACAATCTGAAGCTTATTGGTGAATTGCCTAGTGTAACATGGACCCAATCTGACTGTTAACAATAGTGCCAGATTTATAGCCATGTTTACACTATGGTTGATGCTGCAGGGTGGCTGTTAACTGCCACTGCTTGGTAGATGGTGGTGGATT</genome_strand>
        <mrna_strand>TAATAGTGGTCAGTCTGTTAGAGTGCCATAGATTGCAGTAATTTAGTTAGAGCTAGGATGATATTTCTATTATCAGAACAAACAATCTGAAGCTTATTGGTGAATTGCCTAGTGTAACATGGACCCAATCTGACTGTTAACAATAGTGCCAGATTTATAGCCATGTTTACACTATGGTTGATGCTGCAGGGTGGCTGTTAACTGCCACTGCTTGGTAGATGGTGGTGGATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E372270" ref_strand="+" ref_description="SGN-E372270 [TUS-30-L19]">
      <seq>ggggagctaatacctatggtccaatctgatctctgttgtttttggttaaaatccttatcccatctttcagaattagaaaggaaatttcagttgttcgggcttactctttctggaaatgcagctggggaaattatgacagctgatcagattgaaaatgttattggggccgccaacaagctttgttctttagaggaatcttttgatgcctctgtttctggtcttgcttttagttttcagagatggtttattactttaagatcaaaggttgttcgaactgtggcagatgtactaaaattattgagcatgaatttgctttcacaagatgccaccagtacaaaacaaatagaggcgaggattttggtttggcactcaaattcttctaaaggactcagctcattgttgcaactgcttgcccatgcttcttcccagttcatgatgctagtaaaggaatttgatctcttagcagcgtcattcattgtcatggacaggaaaagtatgaagatagtttctgatcttggattgagttgttcactgttagcttttagtactggattgacattacgtttggccagtttccgtggtaaacaaaattgtagtacttatggtcttgaaactacagacgagcaatttcatgctcagctagttcatgacttttgtagaagacttgggtttacagacatagagactagcaaaaatctgcggcatcttttggatttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="17170" stop="15854"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16870" g_stop="16154" g_length="717"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="717" r_length="717" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-E372270" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>717</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E372270" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16870" e_stop="16154"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGGAGCTAATACCTATGGTCCAATCTGATCTCTGTTGTTTTTGGTTAAAATCCTTATCCCATCTTTCAGAATTAGAAAGGAAATTTCAGTTGTTCGGGCTTACTCTTTCTGGAAATGCAGCTGGGGAAATTATGACAGCTGATCAGATTGAAAATGTTATTGGGGCCGCCAACAAGCTTTGTTCTTTAGAGGAATCTTTTGATGCCTCTGTTTCTGGTCTTGCTTTTAGTTTTCAGAGATGGTTTATTACTTTAAGATCAAAGGTTGTTCGAACTGTGGCAGATGTACTAAAATTATTGAGCATGAATTTGCTTTCACAAGATGCCACCAGTACAAAACAAATAGAGGCGAGGATTTTGGTTTGGCACTCAAATTCTTCTAAAGGACTCAGCTCATTGTTGCAACTGCTTGCCCATGCTTCTTCCCAGTTCATGATGCTAGTAAAGGAATTTGATCTCTTAGCAGCGTCATTCATTGTCATGGACAGGAAAAGTATGAAGATAGTTTCTGATCTTGGATTGAGTTGTTCACTGTTAGCTTTTAGTACTGGATTGACATTACGTTTGGCCAGTTTCCGTGGTAAACAAAATTGTAGTACTTATGGTCTTGAAACTACAGACGAGCAATTTCATGCTCAGCTAGTTCATGACTTGTTAAGAAGACTTGGGTTTACAGACATAGAGACTAGCAAAAATCTGCGGCATCTTTTGGATTTC</genome_strand>
        <mrna_strand>GGGGAGCTAATACCTATGGTCCAATCTGATCTCTGTTGTTTTTGGTTAAAATCCTTATCCCATCTTTCAGAATTAGAAAGGAAATTTCAGTTGTTCGGGCTTACTCTTTCTGGAAATGCAGCTGGGGAAATTATGACAGCTGATCAGATTGAAAATGTTATTGGGGCCGCCAACAAGCTTTGTTCTTTAGAGGAATCTTTTGATGCCTCTGTTTCTGGTCTTGCTTTTAGTTTTCAGAGATGGTTTATTACTTTAAGATCAAAGGTTGTTCGAACTGTGGCAGATGTACTAAAATTATTGAGCATGAATTTGCTTTCACAAGATGCCACCAGTACAAAACAAATAGAGGCGAGGATTTTGGTTTGGCACTCAAATTCTTCTAAAGGACTCAGCTCATTGTTGCAACTGCTTGCCCATGCTTCTTCCCAGTTCATGATGCTAGTAAAGGAATTTGATCTCTTAGCAGCGTCATTCATTGTCATGGACAGGAAAAGTATGAAGATAGTTTCTGATCTTGGATTGAGTTGTTCACTGTTAGCTTTTAGTACTGGATTGACATTACGTTTGGCCAGTTTCCGTGGTAAACAAAATTGTAGTACTTATGGTCTTGAAACTACAGACGAGCAATTTCATGCTCAGCTAGTTCATGACTTTTGTAGAAGACTTGGGTTTACAGACATAGAGACTAGCAAAAATCTGCGGCATCTTTTGGATTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E287203" ref_strand="+" ref_description="SGN-E287203 [cLES-6-F10]">
      <seq>ggggagctaatacctatggtccaatctgatctctgttgtttttggttaaaatccttatcccatctttcagaattagaaaggaaatttcagttgttcgggcttactctttctggaaatgcagctggggaaattatgacagctgatcagattgaaaatgttattggggccgccaacaagctttgttctttagaggaatcttttgatgcctctgtttctggtcttgcttttagttttcagagatggtttattactttaagatcaaaggttgttcgaactgtggcagatgtactaaaattattgagcatgaatttgctttcacaagatgccaccagtacaaaacaaatagaggcgaggattttggtttggcactcaaattcttctaaaggactcagctcattgttgcaactgcttgcccatgcttcttcccagttcatgatgctagtaaaggaatttgatctcttagcagcgtcattcattgtcatggacaggaaaagtatgaagatagtttctgatcttgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="17170" stop="16052"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16870" g_stop="16352" g_length="519"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="519" r_length="519" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-E287203" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>519</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E287203" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16870" e_stop="16352"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGGAGCTAATACCTATGGTCCAATCTGATCTCTGTTGTTTTTGGTTAAAATCCTTATCCCATCTTTCAGAATTAGAAAGGAAATTTCAGTTGTTCGGGCTTACTCTTTCTGGAAATGCAGCTGGGGAAATTATGACAGCTGATCAGATTGAAAATGTTATTGGGGCCGCCAACAAGCTTTGTTCTTTAGAGGAATCTTTTGATGCCTCTGTTTCTGGTCTTGCTTTTAGTTTTCAGAGATGGTTTATTACTTTAAGATCAAAGGTTGTTCGAACTGTGGCAGATGTACTAAAATTATTGAGCATGAATTTGCTTTCACAAGATGCCACCAGTACAAAACAAATAGAGGCGAGGATTTTGGTTTGGCACTCAAATTCTTCTAAAGGACTCAGCTCATTGTTGCAACTGCTTGCCCATGCTTCTTCCCAGTTCATGATGCTAGTAAAGGAATTTGATCTCTTAGCAGCGTCATTCATTGTCATGGACAGGAAAAGTATGAAGATAGTTTCTGATCTTGGA</genome_strand>
        <mrna_strand>GGGGAGCTAATACCTATGGTCCAATCTGATCTCTGTTGTTTTTGGTTAAAATCCTTATCCCATCTTTCAGAATTAGAAAGGAAATTTCAGTTGTTCGGGCTTACTCTTTCTGGAAATGCAGCTGGGGAAATTATGACAGCTGATCAGATTGAAAATGTTATTGGGGCCGCCAACAAGCTTTGTTCTTTAGAGGAATCTTTTGATGCCTCTGTTTCTGGTCTTGCTTTTAGTTTTCAGAGATGGTTTATTACTTTAAGATCAAAGGTTGTTCGAACTGTGGCAGATGTACTAAAATTATTGAGCATGAATTTGCTTTCACAAGATGCCACCAGTACAAAACAAATAGAGGCGAGGATTTTGGTTTGGCACTCAAATTCTTCTAAAGGACTCAGCTCATTGTTGCAACTGCTTGCCCATGCTTCTTCCCAGTTCATGATGCTAGTAAAGGAATTTGATCTCTTAGCAGCGTCATTCATTGTCATGGACAGGAAAAGTATGAAGATAGTTTCTGATCTTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E208700" ref_strand="+" ref_description="SGN-E208700 [cLEC-39-B18]">
      <seq>aattcttattattgatcgtgtgaagcacattttggttaaaaaggattattggttgtcttataagctggcaaaatatgcggcatgcaatggtgcatggttagtaactgcttacatatttggggagctaatacctatggtccaatctgatctctgttgattttggttaaaatccttatcccatctttcagaattagaaaggaaatttcagttgttcgggcttactctttctggaaatgcacctggggaaattatgacagctgatcagattgaaaatgttattgaggccgccaacaagctttgttctttagaggaatctttcgatgcctctgattctggacttgcttttag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="17288" stop="16341"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16988" g_stop="16641" g_length="348"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="348" r_length="348" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-E208700" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>348</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E208700" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16988" e_stop="16641"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTCTCATTATTGATCGTGTGAAGCAAATTTTGGTTAAAAAGGATTATTGGTTGTCTTATAAGCTGGCAAAATATGCGGCATGCAATGGTGCATGGTTAGTAGCTGCTTACATATTTGGGGAGCTAATACCTATGGTCCAATCTGATCTCTGTTGTTTTTGGTTAAAATCCTTATCCCATCTTTCAGAATTAGAAAGGAAATTTCAGTTGTTCGGGCTTACTCTTTCTGGAAATGCAGCTGGGGAAATTATGACAGCTGATCAGATTGAAAATGTTATTGGGGCCGCCAACAAGCTTTGTTCTTTAGAGGAATCTTTTGATGCCTCTGTTTCTGGTCTTGCTTTTAG</genome_strand>
        <mrna_strand>AATTCTTATTATTGATCGTGTGAAGCACATTTTGGTTAAAAAGGATTATTGGTTGTCTTATAAGCTGGCAAAATATGCGGCATGCAATGGTGCATGGTTAGTAACTGCTTACATATTTGGGGAGCTAATACCTATGGTCCAATCTGATCTCTGTTGATTTTGGTTAAAATCCTTATCCCATCTTTCAGAATTAGAAAGGAAATTTCAGTTGTTCGGGCTTACTCTTTCTGGAAATGCACCTGGGGAAATTATGACAGCTGATCAGATTGAAAATGTTATTGAGGCCGCCAACAAGCTTTGTTCTTTAGAGGAATCTTTCGATGCCTCTGATTCTGGACTTGCTTTTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E329408" ref_strand="+" ref_description="SGN-E329408 [cTOD-2-J2]">
      <seq>atctacaggcaaaggcttctttgtttgcagccggatgcgtttctgaactggcagatgattttgcttatgtatttctggagatgcttggaggtctgttggtctcatctgaaacatcaagggctataaggttagctggaggacgtgcttttgctaaaatgtggtgcccaattttactagcagatatagctcataaggttcagtatttctctttaatatgagtttctgccaccaaatacatgtaaattttcttattgcacctgtgactcattccatggaccccctatccttctgtccctttccgctctattctaaaagaacttgttttttgaaaaagcactgttcagaaaccatgtaaatactcatatagatgacaaaattatgcatagtgaaatgcaatgtttttctttttcatgcatgacatgcaagtgatcatctctgaactaattgtgactattgctctagtttttgttacaagttcctcaaaataagtttttaatgataccaggccgatctgtattgtctgacaatttgcttaaatgatgaagaagtgagttcagatttctattgcagcactaaaattgactttttcatattgcagactggtgtgaagctta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="21482" stop="20269"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21182" g_stop="20569" g_length="614"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="614" r_length="614" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-E329408" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>614</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E329408" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21182" e_stop="20569"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTACAGGCAAAGGCTTCTTTGTTTGCAGCCGGATGCTTTTCTGAACTGGCAGATGATTTTGCTTATGTATTTCTGGAGATGCTTGGAGGTCTGTTGGTCTCATCTGAAACATCAAGGGCTATAAGGTTAGCTGGAGGACGTGCTTTTGCTAAAATGTGGTGCCCAATTTTACTAGCAGATATAGCTCATAAGGTTCAGTATTTCTCTTTAATATGAGTTTCTGCCACCAAATACATGTAAATTTTCTTATTGCACCTGTGACTCATTCCATGGACCCCCTATCCTTCTGTCCCTTTCCGCTCTATTCTAAAAGAACTTGTTTTTTGAAAAAGCACTGTTCAGAAACCATGTAAATACTCATATAGATGACAAAATTATGCATAGTGAAATGCAATGTTTTTCTTTTTCATGCATGACATGCAAGTGATCATCTCTGAACTAATTGTGACTATTGCTCTAGTTTTTGTTACAAGTTCCTCAAAATAAGTTTTTAATGATACCAGGCCGATCTGTATTGTCTGACAATTTGCTTAAATGATGAAGAAGTGAGTTCAGATTTCTATTGCAGCACTAAAATTGACTTTTTCATATTGCAGACTGGTGTGAAGCTTA</genome_strand>
        <mrna_strand>ATCTACAGGCAAAGGCTTCTTTGTTTGCAGCCGGATGCGTTTCTGAACTGGCAGATGATTTTGCTTATGTATTTCTGGAGATGCTTGGAGGTCTGTTGGTCTCATCTGAAACATCAAGGGCTATAAGGTTAGCTGGAGGACGTGCTTTTGCTAAAATGTGGTGCCCAATTTTACTAGCAGATATAGCTCATAAGGTTCAGTATTTCTCTTTAATATGAGTTTCTGCCACCAAATACATGTAAATTTTCTTATTGCACCTGTGACTCATTCCATGGACCCCCTATCCTTCTGTCCCTTTCCGCTCTATTCTAAAAGAACTTGTTTTTTGAAAAAGCACTGTTCAGAAACCATGTAAATACTCATATAGATGACAAAATTATGCATAGTGAAATGCAATGTTTTTCTTTTTCATGCATGACATGCAAGTGATCATCTCTGAACTAATTGTGACTATTGCTCTAGTTTTTGTTACAAGTTCCTCAAAATAAGTTTTTAATGATACCAGGCCGATCTGTATTGTCTGACAATTTGCTTAAATGATGAAGAAGTGAGTTCAGATTTCTATTGCAGCACTAAAATTGACTTTTTCATATTGCAGACTGGTGTGAAGCTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E357661" ref_strand="+" ref_description="SGN-E357661 [cTOS-24-E14]">
      <seq>aaaggatgagtatgacaagataactaaagacaccacaaagaaggctatggaagagcttgtttcttccccggattttagcaaatgggctgttgctcacgcagataggattactcttgctccaaagaaagagacaactgctaggcagagaaggtggtaccaatggctatgacttgaaaatgtgattatagtggcggagaacttaggtgtccagacttgttgtaatgtgttccgcgtttttcacgtaggtagtgatcttttttttttttaagtatgtcttatgctgtagttctccacataaaaaaaggtttgtattatggtgtgattacattcttattactctgagctagtgtaacattattgacttttacaaggcactgaaactgactgcttcaaggactgtgctttaatgtttaatgaatgtaacaactggatagtggagataacattttgccactgtaaatgtcttgatgctttgatgttaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="26359" stop="25279"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26059" g_stop="25583" g_length="477"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="477" r_length="477" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="481" polyA_stop="494"/>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-E357661" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>477</cumulative_length_of_scored_exons>
        <coverage percentage="0.966" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E357661" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26059" e_stop="25583"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGGATGAGTATGACAAGATAACTAAAGACACCACAAAGAAGGCTATGGAAGAGCTTGTTTCTTCCCCGGATTTTAGCAAATGGGCTGTTGCTCACGCAGATAGGATTACTCTTGCTCCAAAGAAAGAGACAACTGCTAGGCAGAGAAGGTGGTACCAATGGCTATGACTTGAAAATGTGATTATAGTGGCGGAGAACTTAGGTGTCCAGACTTGTTGTAATGTGTTCCGCGTTTTTCACGTAGGTAGTGATCTTTTTTTTTTTTAAGTATGTCTTATGCTGTAGTTCTCCACATAAAAAAAGGTTTGTATTATGGTGTGATTACATTCTTATTACTCTGAGCTAGTGTAACATTATTGACTTTTACAAGGCACTGAAACTGACTGCTTCAAGGACTGTGCTTTAATGTTTAATGAATGTAACAACTGGATAGTGGAGATAACATTTTGCCACTGTAAATGTCTTGATGCTTTGAT</genome_strand>
        <mrna_strand>AAAGGATGAGTATGACAAGATAACTAAAGACACCACAAAGAAGGCTATGGAAGAGCTTGTTTCTTCCCCGGATTTTAGCAAATGGGCTGTTGCTCACGCAGATAGGATTACTCTTGCTCCAAAGAAAGAGACAACTGCTAGGCAGAGAAGGTGGTACCAATGGCTATGACTTGAAAATGTGATTATAGTGGCGGAGAACTTAGGTGTCCAGACTTGTTGTAATGTGTTCCGCGTTTTTCACGTAGGTAGTGATCTTTTTTTTTTTTAAGTATGTCTTATGCTGTAGTTCTCCACATAAAAAAAGGTTTGTATTATGGTGTGATTACATTCTTATTACTCTGAGCTAGTGTAACATTATTGACTTTTACAAGGCACTGAAACTGACTGCTTCAAGGACTGTGCTTTAATGTTTAATGAATGTAACAACTGGATAGTGGAGATAACATTTTGCCACTGTAAATGTCTTGATGCTTTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E349807" ref_strand="+" ref_description="SGN-E349807 [cTOS-3-P4]">
      <seq>tggagttctgatctcatcaatcttgaggagactatgccgtcccaaatatgttctgcgctttttcaagaatttgtcacaaatagacacgagttatctctgggaatctcaggaattgtacgcatcaccgacaaaagggtcatatgattccaggacgttcaagacaaatctaaattgcacaatccgcccaggttttcctctcaagccacgaagtttgttgtcagaaaaagatacttactattctactttccataaaactcctgaacagaagaagctttcaaaggatgagtatgacaagataactaaagacaccacaaagaaggctatggaagagcttgtttcttccccggattttagcaaatgggctgttgctcacgcagataggattactcttgctccaaagaaagagacaactgctaggcagagaaggtggtaccaatggctatgacttgaaaatgtgattatagtggcggagaacttangtgtccagacttgttgtaatgtgttccgcgtttttcacgtaagtagtgatcttttttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="26884" stop="25497"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26584" g_stop="26519" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="66" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="26518" i_stop="26345" i_length="174">
            <donor d_prob="0.953" d_score="1.00"/>
            <acceptor a_prob="0.505" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26344" g_stop="26223" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="67" r_stop="188" r_length="122" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26222" i_stop="26148" i_length="75">
            <donor d_prob="0.617" d_score="0.98"/>
            <acceptor a_prob="0.759" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="26147" g_stop="25797" g_length="351"/>
          <reference_exon_boundary r_type="cDNA" r_start="189" r_stop="539" r_length="351" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-E349807" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>539</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E349807" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26584" e_stop="26519"/>
          <exon e_start="26344" e_stop="26223"/>
          <exon e_start="26147" e_stop="25797"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGAGTTCTGATCTCATCAATCTTGAGGAGACTATGCCGTCCCAAATATGTTCTGCGCTTTTTCAAGTGAGTGCCTTTTTTAAAAAAAACTAAATAAAATCTTTTACCATCCTTCCTCTCCATTTTCTGAGTGATGCTTATGTAGTCTAGTTACTTTATTCTATTGTTATGTATATGGATGGATGACTTCCATTTTGGAGTCACTTTGTATTTTCACACTCCGGTTTTCATGCAAAGCAGGAATTTGTCACAAATAGACACGAGTTATCTCTGGGAATCTCAGGAATTGTACGCATCACCGACAAAAGGGTCATATGATTCCAGGACGTTCAAGACAAATCTAAATGGCACAATCCGCCCAGGTTTGCCTAAACTAATTATTAGTAGAAATGAAGAAGTATTAGGTGGAGTTTCTCTGAAGTGTATTTTTCCTGCAGGTTTTCCTCTCAAGCCACGAAGTTTGTTGTCAGAAAAAGATACTTACTATTCTACTTTCCATAAAACTCCTGAACAGAAGAAGCTTTCAAAGGATGAGTATGACAAGATAACTAAAGACACCACAAAGAAGGCTATGGAAGAGCTTGTTTCTTCCCCGGATTTTAGCAAATGGGCTGTTGCTCACGCAGATAGGATTACTCTTGCTCCAAAGAAAGAGACAACTGCTAGGCAGAGAAGGTGGTACCAATGGCTATGACTTGAAAATGTGATTATAGTGGCGGAGAACTTAGGTGTCCAGACTTGTTGTAATGTGTTCCGCGTTTTTCACGTAGGTAGTGATCTTTTTTTTT</genome_strand>
        <mrna_strand>TGGAGTTCTGATCTCATCAATCTTGAGGAGACTATGCCGTCCCAAATATGTTCTGCGCTTTTTCAA..............................................................................................................................................................................GAATTTGTCACAAATAGACACGAGTTATCTCTGGGAATCTCAGGAATTGTACGCATCACCGACAAAAGGGTCATATGATTCCAGGACGTTCAAGACAAATCTAAATTGCACAATCCGCCCAG...........................................................................GTTTTCCTCTCAAGCCACGAAGTTTGTTGTCAGAAAAAGATACTTACTATTCTACTTTCCATAAAACTCCTGAACAGAAGAAGCTTTCAAAGGATGAGTATGACAAGATAACTAAAGACACCACAAAGAAGGCTATGGAAGAGCTTGTTTCTTCCCCGGATTTTAGCAAATGGGCTGTTGCTCACGCAGATAGGATTACTCTTGCTCCAAAGAAAGAGACAACTGCTAGGCAGAGAAGGTGGTACCAATGGCTATGACTTGAAAATGTGATTATAGTGGCGGAGAACTTANGTGTCCAGACTTGTTGTAATGTGTTCCGCGTTTTTCACGTAAGTAGTGATCTTTTTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E276124" ref_strand="+" ref_description="SGN-E276124 [cLEN-12-F10]">
      <seq>tcacaaactcgtacttgaagaagatggatcaattgacaccggagtatctcaatttgttgcttggtccattcgatttctcgcttctgcgttgattcttcagagttctgtggatcctttattgtgtgccgaggcatggatatgtggagttctgatctcatcaatcttgaggagactatgccgtcccaaatatgttctgcgctttttcaagaatttgtcacaaatagacacgagttatctctgggaatctcaggaattgtacgcatcaccgacaaaagggtcatatgattccaggacgttcaagacaaatctaaattgcacaatccgcccaggttttcctctcaagccacgaagtttgttgtcagaaaaagatacttactattctactttccataaaactcctgaacagaagaagctttcaaaggatgagtatgacaagataactaaagacaccacaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="27148" stop="25720"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26848" g_stop="26749" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="100" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="26748" i_stop="26626" i_length="123">
            <donor d_prob="0.908" d_score="1.00"/>
            <acceptor a_prob="0.005" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26625" g_stop="26519" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="101" r_stop="207" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26518" i_stop="26345" i_length="174">
            <donor d_prob="0.953" d_score="1.00"/>
            <acceptor a_prob="0.505" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="26344" g_stop="26223" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="208" r_stop="329" r_length="122" r_score="0.992"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="26222" i_stop="26148" i_length="75">
            <donor d_prob="0.617" d_score="0.98"/>
            <acceptor a_prob="0.759" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="26147" g_stop="26020" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="330" r_stop="457" r_length="128" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-E276124" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>457</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E276124" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26848" e_stop="26749"/>
          <exon e_start="26625" e_stop="26519"/>
          <exon e_start="26344" e_stop="26223"/>
          <exon e_start="26147" e_stop="26020"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCACAAACTCGTACTTGAAGAAGATGGATCAATTGACACCGGAGTATCTCAATTTGTTGCTTGGTCCATTCGATTTCTCGCTTCTGCGTTGATTCTTCAGGTTTCCATTTATATGATAATACTACGAATCAATTTAATCCTCCAAAGTTCTCTCACTTTTTGTTAGTCTATATCCCTCAATAGAGTTCAATTGGGCACTGACATAACTTCATTTGTTTGTCAGAGTTCTGTGGATCCTTTATTGTGTGCCGAGGCATGGATATGTGGAGTTCTGATCTCATCAATCTTGAGGAGACTATGCCGTCCCAAATATGTTCTGCGCTTTTTCAAGTGAGTGCCTTTTTTAAAAAAAACTAAATAAAATCTTTTACCATCCTTCCTCTCCATTTTCTGAGTGATGCTTATGTAGTCTAGTTACTTTATTCTATTGTTATGTATATGGATGGATGACTTCCATTTTGGAGTCACTTTGTATTTTCACACTCCGGTTTTCATGCAAAGCAGGAATTTGTCACAAATAGACACGAGTTATCTCTGGGAATCTCAGGAATTGTACGCATCACCGACAAAAGGGTCATATGATTCCAGGACGTTCAAGACAAATCTAAATGGCACAATCCGCCCAGGTTTGCCTAAACTAATTATTAGTAGAAATGAAGAAGTATTAGGTGGAGTTTCTCTGAAGTGTATTTTTCCTGCAGGTTTTCCTCTCAAGCCACGAAGTTTGTTGTCAGAAAAAGATACTTACTATTCTACTTTCCATAAAACTCCTGAACAGAAGAAGCTTTCAAAGGATGAGTATGACAAGATAACTAAAGACACCACAAAG</genome_strand>
        <mrna_strand>TCACAAACTCGTACTTGAAGAAGATGGATCAATTGACACCGGAGTATCTCAATTTGTTGCTTGGTCCATTCGATTTCTCGCTTCTGCGTTGATTCTTCAG...........................................................................................................................AGTTCTGTGGATCCTTTATTGTGTGCCGAGGCATGGATATGTGGAGTTCTGATCTCATCAATCTTGAGGAGACTATGCCGTCCCAAATATGTTCTGCGCTTTTTCAA..............................................................................................................................................................................GAATTTGTCACAAATAGACACGAGTTATCTCTGGGAATCTCAGGAATTGTACGCATCACCGACAAAAGGGTCATATGATTCCAGGACGTTCAAGACAAATCTAAATTGCACAATCCGCCCAG...........................................................................GTTTTCCTCTCAAGCCACGAAGTTTGTTGTCAGAAAAAGATACTTACTATTCTACTTTCCATAAAACTCCTGAACAGAAGAAGCTTTCAAAGGATGAGTATGACAAGATAACTAAAGACACCACAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E709229" ref_strand="+" ref_description="SGN-E709229 [FA51AC11]">
      <seq>gttggtgtaggatctttcattctaagctatgtgccccaattgttgcgttcaatactgcgcgagattggtgttggtgaagacatgtacaaccctgtatctggcaatatttctgctgcttttccttgtgattgctggagcttggttggggttttgggttgttcacaaactcgtacttgaagaagatggatcaattgacaccggagtatctcaatttgttgcttggtccattcgatttctcgcttctgcgttgattcttcacagttctgtggatcctttattgtgtgccgaggcatggatatgtggagttctgatctcatcaatcttgaggagactatgccgtcccaaatatgttctgcgcttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="27623" stop="26224"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="27323" g_stop="27227" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="97" r_length="97" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27226" i_stop="26911" i_length="316">
            <donor d_prob="0.816" d_score="1.00"/>
            <acceptor a_prob="0.859" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26910" g_stop="26749" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="98" r_stop="259" r_length="162" r_score="0.994"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26748" i_stop="26626" i_length="123">
            <donor d_prob="0.908" d_score="0.98"/>
            <acceptor a_prob="0.005" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="26625" g_stop="26524" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="260" r_stop="361" r_length="102" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-E709229" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>361</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E709229" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="27323" e_stop="27227"/>
          <exon e_start="26910" e_stop="26749"/>
          <exon e_start="26625" e_stop="26524"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGGTGTAGGATCTTTCATTCTAAGCTATGTGCCCCAATTGTTGCGTTCAATACTGCGCGAGATTGGTGTTGGTGAAGACATGTACAACCCTGTATGTAAGTTCTTATTGGTTTTATTAGTTGCCTTATTGTTTGAACTTAGGGTTCATCTATTCATTTCGTTTAATATTGGGTTCTTGTTAGGAAAAACCTTTTGCTGAGAGTTTTCATGCCAGTAAAATCTACCTCATATAACTTGATTTTGAGTGCCTTTATACGTTAAATGTCAAAATTTAATGGCTGAAAAGCATATGCTGCTAACTCCTGCTGTTATTTCACGATAAGATGACTGAACTTTAATCTGATTGGTTTATGCACTGAGCATTCCACTTACCATGGAATTTAGGATGACATGGACCGTCTTTTATTGCAGCTGGCAATATTTCTGCTGCTTTTCCTTGTGATTGCTGGAGCTTGGTTGGGGTTTTGGGTTGTTCACAAACTCGTACTTGAAGAAGATGGATCAATTGACACCGGAGTATCTCAATTTGTTGCTTGGTCCATTCGATTTCTCGCTTCTGCGTTGATTCTTCAGGTTTCCATTTATATGATAATACTACGAATCAATTTAATCCTCCAAAGTTCTCTCACTTTTTGTTAGTCTATATCCCTCAATAGAGTTCAATTGGGCACTGACATAACTTCATTTGTTTGTCAGAGTTCTGTGGATCCTTTATTGTGTGCCGAGGCATGGATATGTGGAGTTCTGATCTCATCAATCTTGAGGAGACTATGCCGTCCCAAATATGTTCTGCGCTTT</genome_strand>
        <mrna_strand>GTTGGTGTAGGATCTTTCATTCTAAGCTATGTGCCCCAATTGTTGCGTTCAATACTGCGCGAGATTGGTGTTGGTGAAGACATGTACAACCCTGTAT............................................................................................................................................................................................................................................................................................................................CTGGCAATATTTCTGCTGCTTTTCCTTGTGATTGCTGGAGCTTGGTTGGGGTTTTGGGTTGTTCACAAACTCGTACTTGAAGAAGATGGATCAATTGACACCGGAGTATCTCAATTTGTTGCTTGGTCCATTCGATTTCTCGCTTCTGCGTTGATTCTTCAC...........................................................................................................................AGTTCTGTGGATCCTTTATTGTGTGCCGAGGCATGGATATGTGGAGTTCTGATCTCATCAATCTTGAGGAGACTATGCCGTCCCAAATATGTTCTGCGCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E315661" ref_strand="+" ref_description="SGN-E315661 [cTOA-22-F12]">
      <seq>aattccttcgcgtggagtatttgctcttcttctatggctcctcgtcgcattaacctccatagtccgcgctgatgaactttctttagttgtatctcaatctaccacgctgcagatatctccaggaatagtagtggaaaattctcctggctctaagccaggaacgaaagttatttgtgagagagttcagatccatggattgtcaaggctaaaaagtctaagaaagtatgcccattcagtaaaggtgaatgtgtcatatctgaatccaagtgggcgtccacctaatgctgaggtctgtttccataggaatcaatccgtggcaattgggatgtgtccgccaggccaatggatgaaaataaccaagggttcatgggtgcgatcaatgtcacctttcgagcacaggtttttggatattaggatgacaggctcatctaaggacacttttcaggtctcgctgcacgaagatttttatttgtatcgtgttgtgtttctggtattgggtatattgctacttgctctggcatccttccttagcaagtctctagtatttttctatggtggtgcgatggcagtaggggttattcttgtgatactgatggtccttttccagggaatgaagcttcttccgactggtaggaagagttcactagcaatattcttgtattcatccattggntggtgtaggatctttcattctaagctat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="34614" stop="26994"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34314" g_stop="34229" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="86" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="34228" i_stop="31708" i_length="2521">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31707" g_stop="31491" g_length="217"/>
          <reference_exon_boundary r_type="cDNA" r_start="87" r_stop="303" r_length="217" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="31490" i_stop="29942" i_length="1549">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29941" g_stop="29784" g_length="158"/>
          <reference_exon_boundary r_type="cDNA" r_start="304" r_stop="461" r_length="158" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="29783" i_stop="29677" i_length="107">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="29676" g_stop="29531" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="462" r_stop="607" r_length="146" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="29530" i_stop="27487" i_length="2044">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="27486" g_stop="27424" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="608" r_stop="671" r_length="64" r_score="0.968"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="27423" i_stop="27324" i_length="100">
            <donor d_prob="0.757" d_score="0.96"/>
            <acceptor a_prob="0.964" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="27323" g_stop="27294" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="672" r_stop="701" r_length="30" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-E315661" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>700</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E315661" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34314" e_stop="34229"/>
          <exon e_start="31707" e_stop="31491"/>
          <exon e_start="29941" e_stop="29784"/>
          <exon e_start="29676" e_stop="29531"/>
          <exon e_start="27486" e_stop="27424"/>
          <exon e_start="27323" e_stop="27294"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTCCTTCGCGTGGAGTATTTGCTCTTCTTCTATGGCTCCTCGTCGCATTAACCTCCATAGTCCGCGCTGATGAACTTTCTTTAGGTAACTTTCTTTTAAATTTTAGGGTTCTGAAATATTCTTTTATCTTATCTTTCACGACTTAACGCAAAATTTTCAGGAGAAATTACTGAAGTATGTTAAGATTAGTGAGTTTTTTGACACTTTAAAGTATTGCTTTAGGATTTTAGTCCGTGTAAATTACTATAATTACAGAAAACTATGCCTCAACCCCGCATGCGGGGATTACAGTGGGTATCTTCTTGTTGTTGTGGTTGTAATTCTAAGAAGGGCTTACTGGTTTTGAGTTTTGACGTTGAAGTTGCTATAATTTGATGGTGTAATTTTAAGCTGTATTTAAGTTTTGATGGGTTAAAGTAGAAAAAGATAAATCTGTTCTTTACTTTGCTTGTTGTTTGTCAAAACTGCGATATTGAGAAGATACATTTTTTTAAAAAAGACCAGCAACAAGGATGTACTTGAGCAAGCATTGAGAAAATTATAAGCACATGTTGGTTAGAACAGAGTATGTTTGTTGGATATCAAGCATGCCTGACCCAGGATAACTTCATATGTGTTCAGTAGGAAGGAAATTGTTTTCCAACAAAACATTTTCTAGGAAAATAAGTGGTTTCTTATTTATATTCTTGCATTCGGTATGTAAGTAAAGAATATTATCCTAAAATTATTTCTATATGTCTAAGACAAGGGAAAGGAGGTAGGGGGGCCAGGGAGTGGGATGGGGCTGGACGGGTGTAGGTGGTGGGGTTGTGGGTGGTTGTGAGGGCGGGGAGGAGACAATGTGTCTTGCTTTCCCGATTTCCATTATGAAAATCATTTTCCTTATTTTAAAGGAGCTTCTTTTTCTAAAGCAAATATTTTCTAATTGTTTTGACCAACCAAATACTGGAAAATGTTTTCCTCCATACTGAATACTTCCTTTAATCAGAATATCTTTTCACTTCACTTAGTCAACAATTTCTACATGTGCAAGCAGAACGCAGAAACTACTCGACATCTTCAACTACACTGCCCAGTAACAGGAGATTAGTGGAACATATTTTTGTCTCTTTTTGGACTGAACTGGGTAACGTCTGGTAGTATAAAGGAGGAAGCCTATGTGAGATAGAATAACTGGATAGTTGGTATGTCCATCAGAAGAATCTGGAACTAATCCCTTTTTGTATCCTTTGGTGTGCTTGGAATGAAAGAAACAGTAGATATTTTGACGGAATAGTAATTCCAATACACTCCCTTAAAGCTAGATGTATTATATTTTTATACAGTTGGATTTGCCCTAACACATGTGAGTCCCCTGACAAATTTTTGGACTTCGTTATTTCCTTAACCTAGCATATGATGTACTATATTGGAGCTAACAAACTTTTGTGTTTTCTTCCTATTTTAAATTTTTGCATCTTCATGATGGCATCAATGATATCACTTCATAAACAAGGAGTTTAAAAAGTCAAACATGGACTCAACATCTTGAGAAACATTTGCATTTGCAATGTTGTCACGAAAAGATAGAAACATTACAGGCATTTTGTTGCTTATCAGAATTGGTACATTGAATATGGTATAAAAAAGGGGTTCCTGTGCTCCACAACTAGATGGCCTGGATATGTTTTCTATTTTTTCACTAACTGTAGTTCCCTTGTGGTTTTCACTTCTCAACTATCGGTAATACTGATTTCAATTCACTATAACCTCATGAATTGGTACTAGCATGTTCTTTGTTTGTTTGTTTTATTTTTATATTTCATATTCAAGTACTTGAACATATTGTGCTTTCTCCTTTTTTGAGTTCGCTTTGATGTTTTAAATCCTTATTTTGTGTCCATACATTGAGAGAGAGAGAGAGCTTAGTCAGCAAGTATTGGAAGTTTTCCTTGATAGCTCCTTCTTTAGTGTGGTTGGTGGCGCACTGCCCTTGCATAAATTTGAACAGTTAGGATTGGGCTTGCTGGTAAGAGGTGATCTCCTTAGGTGAAAAAGAGTTGTATAGAGTTCTTAGTTGTCCTTTTTGGCTATAGCTGTTAGCCAAGCATGAGCTCCTACAGAACATCAGTGGCGGACCCAGTATTTTCGTTTAGGGGGTTTCATAAATAAAAGTATAAACGTGTAAGCCTTTAAAAATGGGAACCTTGATCTTTTTGGTGTTTAAAACCACACTTTTAACACATTATTTAAAGTAAAAAAAAAACACTAAAAAAATGAGAAACAGTACACAATTTAAAAAAACTGAAAAAGAAAAATAGAACGCTCACTGGGATTCAAGCCAGTGACACACAACTTAATTTCAAGGGGACTTGCCACTGTGCCATCAACTTTTCTTTGTAATTGAGGAGGTTCAATATATATATATATATATATATATATATCTACTGAAATACAGGAAATTTACTTTATATATACGGTGTAATTTTTTGCCGAACCCCCTGCACGTGGGTCCGCCCCTGCAGAACATTATATCATGTTTATACCTTGAAATGGTGTATTTTTTTTGAACAATTAGTAGCTGGTTATACTCATTATAGTTTCTTTTTCTCTTTGTGTTGGACAGTTGTATCTCAATCTACCACGCTGCAGATATCTCCAGGAATAGTAGTGGAAAATTCTCCTGGCTCTAAGCCAGGAACGAAAGTTATTTGTGAGAGAGTTCAGATCCATGGATTGTCAAGGCTAAAAAGTCTAAGAAAGTATGCCCATTCAGTAAAGGTGAATGTGTCATATCTGAATCCAAGTGGGCGTCCACCTAATGCTGAGGTCTGTTTCCATAGGTGAGCCACTAACCCTTTGTTCCTTTGCTTATTAAACTAAGAAAATGTCTCCAATGATGCTTCTTATAGCACATTTTATTTCTTCTGCTGATCAGTAGTAATAGCATAATGGCTTTTATGATTGTGAAAAATCACAGTAGATGATTTTCTCAAAGAGAAAAATCATAATCGATGAGTTGCTGACAACTTGATATTTATAATATCGGTGTATGGTCTATCATCCTTCTTTTTATTAATATTACCTAGCTCTCTGCATAACAATGAGTTATGTGATAAAGAAATTGTTTTGAATCAGATGGCATGTTATTTAATCTCCAACCTTAAGTATTTGTTGCTACTCGTTAAAGTTGTGTCTGTATGTCATCATTTTTTTATTGGTCTGATAGATACCTAGGAATTCAGGTGTTAAATCTGTATGTTTGAGGGACATCATTTCAAGAGGTAAAATTGACACCCTTCCTCTTGTGTAATATAATGGCTAAACTAAACGTATGACCCATTTATAAGAAAAAAGTAACAGAAAATTCTAGTATGACTTGTCTAATGGTAGTTGGTTTTGCTTCCAAGTTTATACCTTTGAGCTCTTTTCTTTGAGAATGGTAAACTTTACTTCTATATATCTATACTACAACAAAATGTAGTCCCCCATCACAAAAAGTTGTCTCTTTCCAAAATCCTAATAATATAATTAATTAGAGCCAATCAATTACATTAAAAACATCTTTTGTGGCTCTGTGCAATGTGCCGTCTATAACTACTTGTTAACACCAAAAATAGTAAAACCCTAAGCAGTCTGTCTTGATCTTTCGTATGTTGCTCTTTTGCCTTCAAAACATCTCTGATTCCTCTCTTTCCATATGGTCCGCCTAATACATGAGGAACCTGGAACAATCTTCCAGCTCTCCTCCTCCTTCACTGCTTTCTCTGTTCCAGCTTTTTAGCACTTATTTGATTCTCCCAGGTTTCACCTACCTGATCTTCCTATTATGGATGAATGTTTGCCGCAACTGGTCTGTCCATTTGTTGTGCATAAAGAGATGGTTGACTGGCTCTATCTGTTCTTCAAATAGATAGCATCTAGACCATAGGTTGACTTTCCTCTTGTTAAGGTTTTCGTGTGTGAGGACTGCTTCCTTTGCTAATAACCATGTAAAGTAGTTTACCGTATAACGGTATAAGGCACTTTGGTCTTCAAGATCATTCTCCATGTCCATCCTATCTCCTGAGTATTTGTTGTAAGCTGACCTGACAGTTAAAATACCTCTGCTATCCACCTTCCACTCCAAGCTGTCCTTTTCTTCTGTAAAAATGGAGCTTTGAGGGACTGTATTATGAAAAGCTGTTTTAAAGGTCATTTCCCAGTCATTTAGGTTCTATCCTTTTGAGCTCATAATATGAAACTTCTCCAACTGAAATGTCATCTGATATAAAAGGAAGATCAAGAGTCAGAGTTAGAACCTTTCGAAAGTTAGACAGGTATAGGTGATCCTCTTCATCTTTACTGTCTTAAATTTTTATAAATTGTTAAGGGTCATTATCATCTTTGCAGGAATCAATCCGTGGCAATTGGGATGTGTCCGCCAGGCCAATGGATGAAAATAACCAAGGGTTCATGGGTGCGATCAATGTCACCTTTCGAGCACAGGTTTTTGGATATTAGGATGACAGGCTCATCTAAGGACACTTTTCAGGTCTCGCTGCACGAAGGTTTGTTCTCCTGGGCCAATCTGAAATCAACTTCTTTTTGTTGTTTTGTTGCTTTTGGAATTTTAATTCAATTTACCAACCTTAATATACTTCATCCTTCTATGCAGATTTTTATTTGTATCGTGTTGTGTTTCTGGTATTGGGTATATTGCTACTTGCTCTGGCATCCTTCCTTAGCAAGTCTCTAGTATTTTTCTATGGTGGTGCGATGGCAGTAGGGGTTATTCTTGTGATACTGATGGTCCTTTTCCAGGTAACTTTGTACCCTTCATTATCAAAGAAGTATGCATACTTCCGTAAACTTGTCTGTTTTCTGAGTGCAAAGAAGAGCCTCTGCTAGGATTTCTAGATTCCCTTTTTTTAATATTGAAGAAGCATGCGCGCTCTTGTTGGGATTGTCTTTTCAGTTTCAAATCTTGATATTTTAGTTCAAATTTACATAGCAAACTGTTTTAGTTGATTTCAGTAGTTAAAATAATTTTTCACTCGTATTGTGCGAGATAATATTCTTCTTGAAATGTGAATTGTTTTGCAAATGTAAACTGCAGAGTAGCACCATAATAACTCCATGTTACTATTTTTACAAAAATCTTGTGCTGCTGAAGATGTATCTTTAACTTAGAAAAATCACCCCTATGTTGGCGGGAAAAAGAGGGAGAATAAAGCTAACTGTAAATTTTTGAATTTTTTTGGATTTGAGAATGATGACACCCCCTGGGGGTTTGTATATCCCTCCTCATCAATTCCTTGATGAGCTCTTTTGTGTGAATACAAAGTTACCCATTTCAAAAAAAAAAAAAAAAGCTAACAAGCTCGCTAAAATTGTTGACTAATCACATCACAAAGTAGATAAAGATAAGATATTGAAGAAGTTTAAAGTATCTTTGTTACCTGAGATTTGGACTTGGAAAGTATTTTTGACTAATTTTTTTTCTTTTGCAGTGATATTTTTTCCGAATATAATGAATCTTTAACTTCTAAAGTGTATAATTCATCTTTAATAGTTTAGGTTTCTTCCCCTAAATGGCACATGTGAATTAAATCGCAGATATGCTTAAAAAGAGGGAGGAAATGAGAACAATACAAATATAAGAATATCATAAATTACTTATTTTATTGCAAGGCATTTTCTGGATGTCCCAGGTTTCTGTGAAATAATGTTGTAAAAGGTCTTGCATAACTTATATAATATAAGATTGGCTATTATGCCCACTTTGGAGAAATGACATTTTTTGGGCCATTAGAAGGATTTGTAGGCAAACCAATCCCAACAAAGAAAAGGATAAGTAGGCAACTAAATTGAACAAAGGGAGTACAAGTACAACTTATCAACAATTTTTTTTTTGAGTTGTTAGTTCAAATTCTCATTTTATTCTTACCTCACGACAATATAATAATTATGAAATGGTGGAAATCTGGAAAATAATAATTTCTGCTGTTCAGAACTACAACAAATATAGCATGTGAACTGAAAAGCATACGGACGGATATGAAATAATTCCTAATTACTAATCATTAAATAGATGTTTCTCTAAAGAAAGCTAAATGGCTTTTAGGTGATACTATTCCATTGCAAAATTGGCAGGTGGTGTCCTGACTAACGATGGATGAGAGATCTGATCTCCGTGTATATAGAAACAAAAGAAACAATTTTATGTCCGCTTTACATATCAATAATTTTTTATAGCTGTTAATCTTATAATTATCATGTTAAAGAAGGCAACTCTTTTTAAACTATAAAGAAGGCAAATTACTTTAAAACTATAAATAAAAATTTTACACTGTTGTAGACGTGATTTCCTGTTTCAGATGAATTAATTCAACTTGAAGTGGACAGTTGATATCTGTGGTGAATTAGTCCTAATTTTGATTTCATGATGTAGGCAAAGATCGTGGTATTTTAGAGGTGTACAAGATATTTTTTTAAGTTACTTGAAGTCTTAGTGTTATGTGGTAAATTAGTTTTAGCTTAATAAAAAGCTTATATTCCAATCTGGGAGCCAATCAAGAAATTATAGATTTACAACTTTGAATGCTACATTAGAAACATCATCATTCCAACTTACAATCCAATCATGTGACTTTGAGTATGTCATAGTCAACAATGTTAATCAATCAGAAAATATTCAATATTTTATTTTATCTTGAGCTATGTGCATGACAGCTGTATCATGTACGAATGTGTGTAGATGTATAATTGTAGGTATAATATCATCCTTATCAAGAAAACTAAACATGTAGGTCTATCAGGCTTCTATGTTGAAATTTTCTGATTGGTAGTTGTATTCTAATGACAGGGAATGAAGCTTCTTCCGACTGGTAGGAAGAGTTCACTAGCAATATTCTTGTATTCATCCATT-GTGAGTATCTTTGCTAGTATGAGTATACTATTTAACAGTTATTCTTTGAGTCATTCTTTTGAAATTTTGTTACTAAGAGTTGCCATCGTTTTGCATTCAGGTTGGTGTAGGATCTTTCATTCTAAGCTAT</genome_strand>
        <mrna_strand>AATTCCTTCGCGTGGAGTATTTGCTCTTCTTCTATGGCTCCTCGTCGCATTAACCTCCATAGTCCGCGCTGATGAACTTTCTTTAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTATCTCAATCTACCACGCTGCAGATATCTCCAGGAATAGTAGTGGAAAATTCTCCTGGCTCTAAGCCAGGAACGAAAGTTATTTGTGAGAGAGTTCAGATCCATGGATTGTCAAGGCTAAAAAGTCTAAGAAAGTATGCCCATTCAGTAAAGGTGAATGTGTCATATCTGAATCCAAGTGGGCGTCCACCTAATGCTGAGGTCTGTTTCCATAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATCAATCCGTGGCAATTGGGATGTGTCCGCCAGGCCAATGGATGAAAATAACCAAGGGTTCATGGGTGCGATCAATGTCACCTTTCGAGCACAGGTTTTTGGATATTAGGATGACAGGCTCATCTAAGGACACTTTTCAGGTCTCGCTGCACGAAG...........................................................................................................ATTTTTATTTGTATCGTGTTGTGTTTCTGGTATTGGGTATATTGCTACTTGCTCTGGCATCCTTCCTTAGCAAGTCTCTAGTATTTTTCTATGGTGGTGCGATGGCAGTAGGGGTTATTCTTGTGATACTGATGGTCCTTTTCCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAATGAAGCTTCTTCCGACTGGTAGGAAGAGTTCACTAGCAATATTCTTGTATTCATCCATTG....................................................................................................GNTGGTGTAGGATCTTTCATTCTAAGCTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E731732" ref_strand="+" ref_description="SGN-E731732 [LA28AB04]">
      <seq>gtagccaattttttcttccacaaattttcatttcaacccacttgcaatctgcaaccatggaatctctccagcagagtagcctaacatttgctacaaaatttccttctttttgttccttctctcccactcccaacaccttcaagtttcttcaccctttcccttcctctgctattcctctcaccgccactacaccaaaacgaatttctagttttgtgcctaaagctgctgcttccaccgctgcctttgctcaagacattggtgatgtactagcagatgtttcaattttcactgctactggtcagtccgtcaagtttgaggacctttgggatcaaaatgagggagtagctgttgttgcacttctgaggcattttggctgtccttgctgctgggaacttgctaaagcactcaaagagacaaaggagagatttgattctgctggtgtaaagctaattgcagttggtattggtgctcctaacaaagcacgtattcttgctgaaaggttaccatttccattggattgcttgtatgctgatccagaccgcaaggcatacgatgttctaggcctgtattatggtgttggccgcacatttttcaacccagctagtgctaaagtgctctctagattcaatgaactgcgggaagctacgaagaactacaccattgaagcaacccctgatgacagaagtggtgtcttgcagcagggagggatgtttctgtttaaagggaagcagttgttgtatgcatggaaggatgaagggaccggtgaccatgctcctatggaagatatctttgatatttgctgcaaagttcctgttgcataaatgcccttcaatctgtgtttcatctctattcgaatttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="46088" stop="53371"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46388" g_stop="46725" g_length="338"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="338" r_length="338" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46726" i_stop="48579" i_length="1854">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.917" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="48580" g_stop="48626" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="339" r_stop="385" r_length="47" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="48627" i_stop="48730" i_length="104">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="48731" g_stop="48845" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="386" r_stop="500" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="48846" i_stop="51386" i_length="2541">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.934" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="51387" g_stop="51431" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="501" r_stop="545" r_length="45" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="51432" i_stop="51525" i_length="94">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.937" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="51526" g_stop="51585" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="546" r_stop="605" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="51586" i_stop="51675" i_length="90">
            <donor d_prob="0.571" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="51676" g_stop="51771" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="606" r_stop="701" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="51772" i_stop="52915" i_length="1144">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="52916" g_stop="53072" g_length="157"/>
          <reference_exon_boundary r_type="cDNA" r_start="702" r_stop="859" r_length="158" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-E731732" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>858</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E731732" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46388" e_stop="46725"/>
          <exon e_start="48580" e_stop="48626"/>
          <exon e_start="48731" e_stop="48845"/>
          <exon e_start="51387" e_stop="51431"/>
          <exon e_start="51526" e_stop="51585"/>
          <exon e_start="51676" e_stop="51771"/>
          <exon e_start="52916" e_stop="53072"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGCCAATTTTTTCTTCCACAAATTTTCATTTCAACCCACTTGCAATCTGCAACCATGGAATCTCTCCAGCAGAGTAGCCTAACATTTGCTACAAAATTTCCTTCTTTTTGTTCCTTCTCTCCCACTCCCAACACCTTCAAGTTTCTTCACCCTTTCCCTTCCTCTGCTATTCCTCTCACCGCCACTACACCAAAACGAATTTCTAGTTTTGTGCCTAAAGCTGCTGCTTCCACCGCTGCCTTTGCTCAAGACATTGGTGATGTACTAGCAGATGTTTCAATTTTCACTGCTACTGGTCAGTCCGTCAAGTTTGAGGACCTTTGGGATCAAAATGAGGTATTGCTATTTCACAATTCTAACAACTCAATTTCCTATTTTTGGGGATTTTTCTTTTCATCTTCCCAACTATTTGTTTTAATGTGCTGTGCAAATTTCTGGATTGCTAACACCTTGTTTGGATGGTTGTTAACGCAGTACGGTATTGTATTGTTAGTTTAAATACAATGTTTTTAAGTATCTATTTTATCTTTTGATTTAATTTCAAGATTCATTTTACGTAATGATCGAATTTGGTGTGATCCCTTATTTAAAATTATTTTTGTTGGGTTTAGCAAGTGTAAATGGGAAAAGAAAAGAGTGATATGAAAAGTGAGGGAACTATTTTGGAGTGAAAATGAAAATTTTGCAAATGAAAAGTCATTTCTCTTATATCGGCAAAAGAAAGGAAAATTGTTGTCCTTATATAAAGAGGAAACACTTCCTTTACTTCTTAAAGAGCTAAGTTCGGCAAAAATGATGTGATTGAAACAATCTTTGTTAATCAAATAAATTCTATTAAATATTATCTCTTAAATTAATTTAGAACGTTAGTTAATTAACAGAATTAATTCGTGTGATTGAATCAATTTTTGTTAATCAAATAAATTCTGTTAATATTATCTCTTATAAATTAATTTAGATCGTTAGTTAATTAGTTAATTAACGGAATTAATTCGCTGATTACAGTAACATTTCAAAAAGTTATTACTCTTTTCGAAAAGTCGTTATTTCCTAACAGACTCATTTTCCGAAAAAACGGGTCTGAACACATTTTTCTGAACAGACACGTTTCTTGCTAAAAATGACTATAAAAGGAAGTCATTTTTCGTTTTTTCAAACACTGAAATTTTCCTTCTCTGCATATATTTTTCTCTCAAAATCAAAGTGTCGATCGACTGAGTCTGTGTGACTTGTTGTTGTTCTTAAGTTCGCTGAAGTTAAAGAAGTTTGAGGTACCGCTATTTCTTTAACAGGATTAATCCATTTTATCTTGGGAGAAATTAATCCATAACCTCGTGTACAGTGGGATTAAATTTCTTAAGGAGACACGGTAGTTTCTATGGACTCGAATTATTTTGTATTTTTTCTGCTTCATCTTATTTCTGTTTCTGTTTATTTGTTAACCTTATAAATACAGGTTGATAACAATTTTAATAATTATATTTCATCTTTTATACTACCTTTTTCATAGTAGTTCAACCACGTATCCTACTTATCTATTAGGTTTATTGGTTAAATTATGGATGTGTGACATTATGTAATGACGGAGAACAATACAATCTTAAAACAATACAGTATGATACAATATAACATAATATGATACATTATGAAACAATACTTAACAATTACTCGGACAAACTGTAAAGAGAATCCTTTCTTACTATAACAATACAACAAGTGACTAATTAAGTTGTTGAGAGCCTTGATGTCGTAAATTAAATCTAGAAATAAAAACAGTAGGTGGTTCTTCTCATTTGTACTAGCCTAGGTGGTATACCTGGTGCTGGTGGGAGGTGCAAGTATCTCGTGGAATTAGTTGAGGTGTGCTAAAGGTAGGGTGGACACCATGGTCATTAAAAATTAAATAATAATAAAAAGATAACAGTATAACTAGTACATATTTAAGGTATGCCCAGGCTGACTGAAACAATAAAGAAGAAAAAAAATGGAAATTTACTTAATAGGGGCAGGAAAGATTAGAAACTTAAGGCAAACAATTCGGTGGTGCATATATGGTTTAAATGGAAAAATGGGGCTTGATGCCTATGTTATCATGGAGCTACCTATCTCCGTTTCATGAATTTCAAATGGCTGACCGACGTTTTCTGGTAGCATAATTACATTTTGTTATTGGGTCGTTATCTTCACCAGGGAGTAGCTGTTGTTGCACTTCTGAGGCATTTTGGCTGTCCTTGCTGGTAAATTATGACCTCACTTTTTCTATCAAGACTTTTTGTTTTGGTGTTTTATATACAATTTTTGTTTTTGATATTCTTGTTCGATATGCATTGCTGTTTGTTAGCTGGGAACTTGCTAAAGCACTCAAAGAGACAAAGGAGAGATTTGATTCTGCTGGTGTAAAGCTAATTGCAGTTGGTATTGGTGCTCCTAACAAAGCACGTATTCTTGCTGAAAGGGTATCTTCATTTCACCTTGGCTGTTACTTCGAATGATTTAGTTCTTTGACATATTATTTCTAATGTTTCAAATAAGCTAGTTAAGGTCATACATGTCATATCAAACTTCTGGCTCAATTGACTCCATGAACTTAAGGTTCCTTCAGAAACATATTTAAATTCAAAGTTGAAGTTTTTGTTTGAATTGTTTCGTTCAAATATGAAATCCATGAGTGGAAGTTGAATATTTGTGAAAACTTACTCGAAATATGCCTTCAACTTGAAAAAATTTATTCAAGTTTAAGTTACAATTGCGTTCTCAGTTTCATGAATTAAAGTTGACATGCAAGCTTAAATCTCTTTATTTGCAAGTCAAGTCCACAAACAAACACCACATAATTGATTCAAGAAATGTCAAAATGTGGTTTCTGCAAGAAAATAGTGTCACTTGCCTCAACTATTGACTGACCTTAGTTTGGAAGCAATAGAACTATATGTCGTCGGTTGAAATTTGATACTGTTTGTCCGAATTTGCCTCTATTCTGATTTGGAAGAAGTTTGCTTGATTTTGCTACTTAAATATAGAGTTAGTATGTCCTAAACAGAGAACCAATATGGACTTATGCATGGTATATCTACAACAAAGGCTATATTTCTGCTAAGAAGATTGATCAAAATTTATCAAGAAAGATCTAAACATGGTGTCATCGAGAGAAAACATATGATAAAGTACCATGAAAGGTCCTCTGGTCCTTTGGTGGGTGATGGAAAAGAAAATAGTCCATATTAAATATCTTAAGGCCATAAAGGACATGTATAAAGAAGTTGTTACTAGTGTGAAAATAGTAGGAGATACAAAAAAGAATTCCTATAACATTGAGTCTATAACAGAGATTGATATTGAGTCCCTACTTGTTTACCTAGTTATGAATGAGCTAACCACCAAAATACAAGATGGTTCTATGGGGTGTATTTGCTGACAAAAGTGTTGATTGCTGAAACCAACAGGGATGTCAACCAGAAGCTTGATCAATGGGGAAGCAGTTAGATACGGGTTTTAGGATGAATAGAAGTACGACAGAATACATGCACGACGAGTTTAGTCCGCATGAGAAGAGTGAAGTTGAGATGAGGCTAGATGAGTGGTGCCAAATGCTTAGATATCTAGGCTTGTCGTTTCAGGAGACTGGAATGGCAGATGAGCGTTACTCATAGAATGTTAGATGGTTGAAAAGGAAAACTACTGAGCCAAGAGTCTTTCGAAAACAGCTCAGTAAGGGTAAGGTTTGGGTACACTCTATCTTCCTAGACCCCACTTGTGAATTACATTGGATATGTTGGTGTTGTTGTTGAAAAGGAAAACTACCACTAAGGTTTTATGTAATCAGAGGATGTCTACAAAAGTGAAAGGTAAGTTCTAAAGGACAATTATACCAATAATGTTATATATATGGTAGTGAATGTTGGATTACTAAAATCCAACATATTCACAAGATGAGTGTTCCAGAGATGTGACCGCTAAGATGGATATGTGGTCATACAAGATCAGAAAAGATTAAAAATGAGCATATTAGGCAAAAGGTGCAAGTAACACGAGTTGAGGATAAAATGAGAGAAGATCGCTTGAGATGGTTTGGTCATGTCTTTAATCGACCTACCTACGTATGCATCATTCTGTAGATGTGAAACTATGGTGATGGAAGGTGTTAAAAGGGAACTAGGTAGACCTAAAATCACGGGGAAAGAAGTTGTCTCGAAAGAGCTATAATTTCTTGGAACCAATGCAAACTTAGCTAAGAATATGACGACAATGGAAGAAAAAAATCTATATAGGTGATATTTACTTGTTGCAAATGAGTTTTTGGTCATATTAGTATGTGGATTTTGAACCTATTGTTTATCTAGGAGTATTATAACCTCATCGCAGATTTTACCTATAAAAATATCAAGAACTTTGTATGTTAAGGTGCATACAAGCTGGCCCCAACACCACGGATAACAAAGAGCACTGCTGTTGTTGTTGCTGCTAATGTGGACTTATATTCTCTGTTAATATGTTTTGCCTCTATAAGTGACATCTGGTGTGGTAAGGATGCATTTATTTTGAACTCCAATACTCCAGAAGCTGCCTAGCTCCATCTTATGCACGGCAGATCTAGCCTTTTTTATAAGCTAAAGCTGCAGTACTGATTCATTAAAATAGTTCCGATTTTGGAATCAAAGAACATAATAATAGAGTATTTTGAATTGCTTCCTTAATTTGTATTTCATAAAGTTCGATGCCAACTAATTGGGAGTAAACTTAGTGATTTTGGTACACTTATATTAGGCTGGTGTTGTAGACATACATTAGTTGGATTAAATTTGTCTTAAGAGACCAACTCGTTGACAACGGAAGGAAACTGTTTTAAAAGGTGGAATGAAAATTGAGGATTCTTCCAAAGTTATTTAGTACCGTGGCATGCTTCTTAATTGAAACTGTGAATCATCATGCTGTCAACAACTTGATTATATATTTGAAGGATCCTGAGCTGATTCTTTTTGCTTCATATTTATGGCCAGTTACCATTTCCATTGGATTGCTTGTATGCTGATCCAGACCGCAAGGTTAGTATCTGCCTATCTCCACAACTATGTGACTGCTTCATTTTGCCTTTCACGATTTTTTCTTGGAGATTTTGACACTTTCCTTGTATCTCAGGCATACGATGTTCTAGGCCTGTATTATGGTGTTGGCCGCACATTTTTCAACCCAGCTAGTGTAATGATCTCAAGGAGTTTCCCTTCATAAAAATGATCATTCTGCTCCATGAGAATGACTTGATCTTTAACTAATTTTTTCCCTTGTCAGGCTAAAGTGCTCTCTAGATTCAATGAACTGCGGGAAGCTACGAAGAACTACACCATTGAAGCAACCCCTGATGACAGAAGTGGTGTCTTGCAGCAGGTTTAAGCTCTTTCTTCTACTGCTGCATTGTTATTCATGAATTAGGGGTGTCATGTTTAGCCCATAAAAATATAACCTGTCCAACACATCCAGACTTGAGCGGGTTAGTCTGGGTATATATTAGTTGGCATAACCCAAGTTAAACTCATTTAAAATCTTAGGACAATTTGTACTTCATATGTAGCCAAAGTTAGCTCATGTAAAAGATTGGTTCAATTTACGCTTGTATATGAAGCCCAAATTGACCCATACAAAAGCTTATCGAACATAGAAAAGTAAGCATGCACCCAAGGGTGTGGCCTAGTGGCCAATAAAGTAGTTAAGAGCATTGAAGTCTCAGGTTCAAATCTCAGATGGAGACAAAAAACACTAGGAGAATTCTTCCCATTTGTTCTAGCCCTGATCGACATAGTTACCTGGTACCTGCTGTTGCGCAAAAGCTGGCCCGGACACCACGGTTATCCAAAAAGAGAAAAGTTGGCCTTTTTGAGTTTGATTTATTTGATATAGCTATGATAAACAAAAGAATAAAGCTTTATTAGTTTGATTTAGTAATTAGACAAAGTATAAAAGAACAAATGAACCATAAATTGACTTGGATGGCTTGGGGTTATGAACTACTCCCTCCATCCACTATTGTTTTTCATGTATACTAAAAATAGTTGTCCAAAACTTGATTGTCACTTAAAACAATCAAGAAACAATTGGTCTTTTTTTTCTTTTCAATTCTGCCCTTAATAATTACATAACTACTTATTTCAAAAAGTAACCATTTAAAAGTTACAAGACTACTTTAATGTGAAAGAAAAGTTGTTTTTACAATTTTCAAAAAGTACAAACCATTTTAATAATGATTGATAATAGGGTTATATTAGTCAAATTGCACCTTATATTAAATTTTTCTTTAAGGGTTGTGCATGATCTTATCCTTACAAACAATAGTGGACGGAGGGAGTATTGTTTAGTCTAAATTAGTTGGCTCATCGTCAACCGAGAAACTATTGAGTGGGTTGTGATCCAGCCCGTATATCATGTTGACCCAAATATAGTCCAACCCGCTCATTTGACACCCGTACAATCAAGATTTCCGTCAAGCTCTTGGTTTATGTCGAGATAGTAATATTCGTTTGTATGTTGATACCAGGGAGGGATGTTTCTGTTTAAAGGGAAGCAGTTGTTGTATGCATGGAAGGATGAAGGGACCGGTGACCATGCTCCTATGGAAGATATCTTTGATATTTGCTGCAAAGTTCCTGTTGCATAAATG-CCTTCAATCTGTGTTTCATCTCTATTCGAATTTC</genome_strand>
        <mrna_strand>GTAGCCAATTTTTTCTTCCACAAATTTTCATTTCAACCCACTTGCAATCTGCAACCATGGAATCTCTCCAGCAGAGTAGCCTAACATTTGCTACAAAATTTCCTTCTTTTTGTTCCTTCTCTCCCACTCCCAACACCTTCAAGTTTCTTCACCCTTTCCCTTCCTCTGCTATTCCTCTCACCGCCACTACACCAAAACGAATTTCTAGTTTTGTGCCTAAAGCTGCTGCTTCCACCGCTGCCTTTGCTCAAGACATTGGTGATGTACTAGCAGATGTTTCAATTTTCACTGCTACTGGTCAGTCCGTCAAGTTTGAGGACCTTTGGGATCAAAATGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGTAGCTGTTGTTGCACTTCTGAGGCATTTTGGCTGTCCTTGCTG........................................................................................................CTGGGAACTTGCTAAAGCACTCAAAGAGACAAAGGAGAGATTTGATTCTGCTGGTGTAAAGCTAATTGCAGTTGGTATTGGTGCTCCTAACAAAGCACGTATTCTTGCTGAAAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACCATTTCCATTGGATTGCTTGTATGCTGATCCAGACCGCAAG..............................................................................................GCATACGATGTTCTAGGCCTGTATTATGGTGTTGGCCGCACATTTTTCAACCCAGCTAGT..........................................................................................GCTAAAGTGCTCTCTAGATTCAATGAACTGCGGGAAGCTACGAAGAACTACACCATTGAAGCAACCCCTGATGACAGAAGTGGTGTCTTGCAGCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGGATGTTTCTGTTTAAAGGGAAGCAGTTGTTGTATGCATGGAAGGATGAAGGGACCGGTGACCATGCTCCTATGGAAGATATCTTTGATATTTGCTGCAAAGTTCCTGTTGCATAAATGCCCTTCAATCTGTGTTTCATCTCTATTCGAATTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E247964" ref_strand="+" ref_description="SGN-E247964 [cLEF-47-N24]">
      <seq>ttttttcttccacaaattttcatttcaacccacttgcaatctgcaaccatggaatctctccagcagagtagcctaacatttgctacaaaatttccttctttttgttccttctctcccactcccaacaccttcaagtttcttcaccctttcccttcctctgctattcctctcaccgccactacaccaaaacgaatttctagttttgtgcctaaagctgctgcttccaccgctgcctttgctcaagacattggtgatgtactagcagatgtttcaattttcactgctactggtcagtccgtcaagtttgaggacctttgggatcaaaatgagggagtagctgttgttgcacttctgaggcattttggctgtccttgctgctgggaacttgctaaagcactcaaagagacaaaggagagatttgattct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="46096" stop="49079"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46396" g_stop="46725" g_length="330"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="330" r_length="330" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46726" i_stop="48579" i_length="1854">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.917" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="48580" g_stop="48626" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="331" r_stop="377" r_length="47" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="48627" i_stop="48730" i_length="104">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="48731" g_stop="48779" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="378" r_stop="426" r_length="49" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-E247964" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>426</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E247964" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46396" e_stop="46725"/>
          <exon e_start="48580" e_stop="48626"/>
          <exon e_start="48731" e_stop="48779"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTTCTTCCACAAATTTTCATTTCAACCCACTTGCAATCTGCAACCATGGAATCTCTCCAGCAGAGTAGCCTAACATTTGCTACAAAATTTCCTTCTTTTTGTTCCTTCTCTCCCACTCCCAACACCTTCAAGTTTCTTCACCCTTTCCCTTCCTCTGCTATTCCTCTCACCGCCACTACACCAAAACGAATTTCTAGTTTTGTGCCTAAAGCTGCTGCTTCCACCGCTGCCTTTGCTCAAGACATTGGTGATGTACTAGCAGATGTTTCAATTTTCACTGCTACTGGTCAGTCCGTCAAGTTTGAGGACCTTTGGGATCAAAATGAGGTATTGCTATTTCACAATTCTAACAACTCAATTTCCTATTTTTGGGGATTTTTCTTTTCATCTTCCCAACTATTTGTTTTAATGTGCTGTGCAAATTTCTGGATTGCTAACACCTTGTTTGGATGGTTGTTAACGCAGTACGGTATTGTATTGTTAGTTTAAATACAATGTTTTTAAGTATCTATTTTATCTTTTGATTTAATTTCAAGATTCATTTTACGTAATGATCGAATTTGGTGTGATCCCTTATTTAAAATTATTTTTGTTGGGTTTAGCAAGTGTAAATGGGAAAAGAAAAGAGTGATATGAAAAGTGAGGGAACTATTTTGGAGTGAAAATGAAAATTTTGCAAATGAAAAGTCATTTCTCTTATATCGGCAAAAGAAAGGAAAATTGTTGTCCTTATATAAAGAGGAAACACTTCCTTTACTTCTTAAAGAGCTAAGTTCGGCAAAAATGATGTGATTGAAACAATCTTTGTTAATCAAATAAATTCTATTAAATATTATCTCTTAAATTAATTTAGAACGTTAGTTAATTAACAGAATTAATTCGTGTGATTGAATCAATTTTTGTTAATCAAATAAATTCTGTTAATATTATCTCTTATAAATTAATTTAGATCGTTAGTTAATTAGTTAATTAACGGAATTAATTCGCTGATTACAGTAACATTTCAAAAAGTTATTACTCTTTTCGAAAAGTCGTTATTTCCTAACAGACTCATTTTCCGAAAAAACGGGTCTGAACACATTTTTCTGAACAGACACGTTTCTTGCTAAAAATGACTATAAAAGGAAGTCATTTTTCGTTTTTTCAAACACTGAAATTTTCCTTCTCTGCATATATTTTTCTCTCAAAATCAAAGTGTCGATCGACTGAGTCTGTGTGACTTGTTGTTGTTCTTAAGTTCGCTGAAGTTAAAGAAGTTTGAGGTACCGCTATTTCTTTAACAGGATTAATCCATTTTATCTTGGGAGAAATTAATCCATAACCTCGTGTACAGTGGGATTAAATTTCTTAAGGAGACACGGTAGTTTCTATGGACTCGAATTATTTTGTATTTTTTCTGCTTCATCTTATTTCTGTTTCTGTTTATTTGTTAACCTTATAAATACAGGTTGATAACAATTTTAATAATTATATTTCATCTTTTATACTACCTTTTTCATAGTAGTTCAACCACGTATCCTACTTATCTATTAGGTTTATTGGTTAAATTATGGATGTGTGACATTATGTAATGACGGAGAACAATACAATCTTAAAACAATACAGTATGATACAATATAACATAATATGATACATTATGAAACAATACTTAACAATTACTCGGACAAACTGTAAAGAGAATCCTTTCTTACTATAACAATACAACAAGTGACTAATTAAGTTGTTGAGAGCCTTGATGTCGTAAATTAAATCTAGAAATAAAAACAGTAGGTGGTTCTTCTCATTTGTACTAGCCTAGGTGGTATACCTGGTGCTGGTGGGAGGTGCAAGTATCTCGTGGAATTAGTTGAGGTGTGCTAAAGGTAGGGTGGACACCATGGTCATTAAAAATTAAATAATAATAAAAAGATAACAGTATAACTAGTACATATTTAAGGTATGCCCAGGCTGACTGAAACAATAAAGAAGAAAAAAAATGGAAATTTACTTAATAGGGGCAGGAAAGATTAGAAACTTAAGGCAAACAATTCGGTGGTGCATATATGGTTTAAATGGAAAAATGGGGCTTGATGCCTATGTTATCATGGAGCTACCTATCTCCGTTTCATGAATTTCAAATGGCTGACCGACGTTTTCTGGTAGCATAATTACATTTTGTTATTGGGTCGTTATCTTCACCAGGGAGTAGCTGTTGTTGCACTTCTGAGGCATTTTGGCTGTCCTTGCTGGTAAATTATGACCTCACTTTTTCTATCAAGACTTTTTGTTTTGGTGTTTTATATACAATTTTTGTTTTTGATATTCTTGTTCGATATGCATTGCTGTTTGTTAGCTGGGAACTTGCTAAAGCACTCAAAGAGACAAAGGAGAGATTTGATTCT</genome_strand>
        <mrna_strand>TTTTTTCTTCCACAAATTTTCATTTCAACCCACTTGCAATCTGCAACCATGGAATCTCTCCAGCAGAGTAGCCTAACATTTGCTACAAAATTTCCTTCTTTTTGTTCCTTCTCTCCCACTCCCAACACCTTCAAGTTTCTTCACCCTTTCCCTTCCTCTGCTATTCCTCTCACCGCCACTACACCAAAACGAATTTCTAGTTTTGTGCCTAAAGCTGCTGCTTCCACCGCTGCCTTTGCTCAAGACATTGGTGATGTACTAGCAGATGTTTCAATTTTCACTGCTACTGGTCAGTCCGTCAAGTTTGAGGACCTTTGGGATCAAAATGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGTAGCTGTTGTTGCACTTCTGAGGCATTTTGGCTGTCCTTGCTG........................................................................................................CTGGGAACTTGCTAAAGCACTCAAAGAGACAAAGGAGAGATTTGATTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E250095" ref_strand="+" ref_description="SGN-E250095 [cLEG-4-K6]">
      <seq>ttttcttccacaaattttcatttcaacccacttgcaatctgcaaccatggaatctctccagcagagtagcctaacatttgctacaaaatttccttctttttgttccttctctcccactcccaacaccttcaagtttcttcaccctttcccttcctctgctattcctctcaccgccactacaccaaaacgaatttctagttttgtgcctaaagctgctgcttccaccgctgcctttgctcaagacattggtgatgtactagcagatgtttcaattttcactgctactggtcagtccgtcaagtttgaggacctttgggatcaaaatgagggagtagctgttgttgcacttctgaggcattttggctgtccttgctgctgggaacttgctaaagcactcaaagagacaaaggagagatttgattctgctggtgtaaagctaattgcagttggtattggtgctcctaacaaagcacgtattcttgctgaaaggttaccatttccattggattgcttgtatgctgatccagaccgcaaggcata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="46098" stop="51732"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46398" g_stop="46725" g_length="328"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="328" r_length="328" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46726" i_stop="48579" i_length="1854">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.917" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="48580" g_stop="48626" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="329" r_stop="375" r_length="47" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="48627" i_stop="48730" i_length="104">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="48731" g_stop="48845" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="376" r_stop="490" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="48846" i_stop="51386" i_length="2541">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.934" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="51387" g_stop="51431" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="491" r_stop="535" r_length="45" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="51432" i_stop="51525" i_length="94">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.937" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="51526" g_stop="51530" g_length="5"/>
          <reference_exon_boundary r_type="cDNA" r_start="536" r_stop="540" r_length="5" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-E250095" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>540</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E250095" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46398" e_stop="46725"/>
          <exon e_start="48580" e_stop="48626"/>
          <exon e_start="48731" e_stop="48845"/>
          <exon e_start="51387" e_stop="51431"/>
          <exon e_start="51526" e_stop="51530"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTCTTCCACAAATTTTCATTTCAACCCACTTGCAATCTGCAACCATGGAATCTCTCCAGCAGAGTAGCCTAACATTTGCTACAAAATTTCCTTCTTTTTGTTCCTTCTCTCCCACTCCCAACACCTTCAAGTTTCTTCACCCTTTCCCTTCCTCTGCTATTCCTCTCACCGCCACTACACCAAAACGAATTTCTAGTTTTGTGCCTAAAGCTGCTGCTTCCACCGCTGCCTTTGCTCAAGACATTGGTGATGTACTAGCAGATGTTTCAATTTTCACTGCTACTGGTCAGTCCGTCAAGTTTGAGGACCTTTGGGATCAAAATGAGGTATTGCTATTTCACAATTCTAACAACTCAATTTCCTATTTTTGGGGATTTTTCTTTTCATCTTCCCAACTATTTGTTTTAATGTGCTGTGCAAATTTCTGGATTGCTAACACCTTGTTTGGATGGTTGTTAACGCAGTACGGTATTGTATTGTTAGTTTAAATACAATGTTTTTAAGTATCTATTTTATCTTTTGATTTAATTTCAAGATTCATTTTACGTAATGATCGAATTTGGTGTGATCCCTTATTTAAAATTATTTTTGTTGGGTTTAGCAAGTGTAAATGGGAAAAGAAAAGAGTGATATGAAAAGTGAGGGAACTATTTTGGAGTGAAAATGAAAATTTTGCAAATGAAAAGTCATTTCTCTTATATCGGCAAAAGAAAGGAAAATTGTTGTCCTTATATAAAGAGGAAACACTTCCTTTACTTCTTAAAGAGCTAAGTTCGGCAAAAATGATGTGATTGAAACAATCTTTGTTAATCAAATAAATTCTATTAAATATTATCTCTTAAATTAATTTAGAACGTTAGTTAATTAACAGAATTAATTCGTGTGATTGAATCAATTTTTGTTAATCAAATAAATTCTGTTAATATTATCTCTTATAAATTAATTTAGATCGTTAGTTAATTAGTTAATTAACGGAATTAATTCGCTGATTACAGTAACATTTCAAAAAGTTATTACTCTTTTCGAAAAGTCGTTATTTCCTAACAGACTCATTTTCCGAAAAAACGGGTCTGAACACATTTTTCTGAACAGACACGTTTCTTGCTAAAAATGACTATAAAAGGAAGTCATTTTTCGTTTTTTCAAACACTGAAATTTTCCTTCTCTGCATATATTTTTCTCTCAAAATCAAAGTGTCGATCGACTGAGTCTGTGTGACTTGTTGTTGTTCTTAAGTTCGCTGAAGTTAAAGAAGTTTGAGGTACCGCTATTTCTTTAACAGGATTAATCCATTTTATCTTGGGAGAAATTAATCCATAACCTCGTGTACAGTGGGATTAAATTTCTTAAGGAGACACGGTAGTTTCTATGGACTCGAATTATTTTGTATTTTTTCTGCTTCATCTTATTTCTGTTTCTGTTTATTTGTTAACCTTATAAATACAGGTTGATAACAATTTTAATAATTATATTTCATCTTTTATACTACCTTTTTCATAGTAGTTCAACCACGTATCCTACTTATCTATTAGGTTTATTGGTTAAATTATGGATGTGTGACATTATGTAATGACGGAGAACAATACAATCTTAAAACAATACAGTATGATACAATATAACATAATATGATACATTATGAAACAATACTTAACAATTACTCGGACAAACTGTAAAGAGAATCCTTTCTTACTATAACAATACAACAAGTGACTAATTAAGTTGTTGAGAGCCTTGATGTCGTAAATTAAATCTAGAAATAAAAACAGTAGGTGGTTCTTCTCATTTGTACTAGCCTAGGTGGTATACCTGGTGCTGGTGGGAGGTGCAAGTATCTCGTGGAATTAGTTGAGGTGTGCTAAAGGTAGGGTGGACACCATGGTCATTAAAAATTAAATAATAATAAAAAGATAACAGTATAACTAGTACATATTTAAGGTATGCCCAGGCTGACTGAAACAATAAAGAAGAAAAAAAATGGAAATTTACTTAATAGGGGCAGGAAAGATTAGAAACTTAAGGCAAACAATTCGGTGGTGCATATATGGTTTAAATGGAAAAATGGGGCTTGATGCCTATGTTATCATGGAGCTACCTATCTCCGTTTCATGAATTTCAAATGGCTGACCGACGTTTTCTGGTAGCATAATTACATTTTGTTATTGGGTCGTTATCTTCACCAGGGAGTAGCTGTTGTTGCACTTCTGAGGCATTTTGGCTGTCCTTGCTGGTAAATTATGACCTCACTTTTTCTATCAAGACTTTTTGTTTTGGTGTTTTATATACAATTTTTGTTTTTGATATTCTTGTTCGATATGCATTGCTGTTTGTTAGCTGGGAACTTGCTAAAGCACTCAAAGAGACAAAGGAGAGATTTGATTCTGCTGGTGTAAAGCTAATTGCAGTTGGTATTGGTGCTCCTAACAAAGCACGTATTCTTGCTGAAAGGGTATCTTCATTTCACCTTGGCTGTTACTTCGAATGATTTAGTTCTTTGACATATTATTTCTAATGTTTCAAATAAGCTAGTTAAGGTCATACATGTCATATCAAACTTCTGGCTCAATTGACTCCATGAACTTAAGGTTCCTTCAGAAACATATTTAAATTCAAAGTTGAAGTTTTTGTTTGAATTGTTTCGTTCAAATATGAAATCCATGAGTGGAAGTTGAATATTTGTGAAAACTTACTCGAAATATGCCTTCAACTTGAAAAAATTTATTCAAGTTTAAGTTACAATTGCGTTCTCAGTTTCATGAATTAAAGTTGACATGCAAGCTTAAATCTCTTTATTTGCAAGTCAAGTCCACAAACAAACACCACATAATTGATTCAAGAAATGTCAAAATGTGGTTTCTGCAAGAAAATAGTGTCACTTGCCTCAACTATTGACTGACCTTAGTTTGGAAGCAATAGAACTATATGTCGTCGGTTGAAATTTGATACTGTTTGTCCGAATTTGCCTCTATTCTGATTTGGAAGAAGTTTGCTTGATTTTGCTACTTAAATATAGAGTTAGTATGTCCTAAACAGAGAACCAATATGGACTTATGCATGGTATATCTACAACAAAGGCTATATTTCTGCTAAGAAGATTGATCAAAATTTATCAAGAAAGATCTAAACATGGTGTCATCGAGAGAAAACATATGATAAAGTACCATGAAAGGTCCTCTGGTCCTTTGGTGGGTGATGGAAAAGAAAATAGTCCATATTAAATATCTTAAGGCCATAAAGGACATGTATAAAGAAGTTGTTACTAGTGTGAAAATAGTAGGAGATACAAAAAAGAATTCCTATAACATTGAGTCTATAACAGAGATTGATATTGAGTCCCTACTTGTTTACCTAGTTATGAATGAGCTAACCACCAAAATACAAGATGGTTCTATGGGGTGTATTTGCTGACAAAAGTGTTGATTGCTGAAACCAACAGGGATGTCAACCAGAAGCTTGATCAATGGGGAAGCAGTTAGATACGGGTTTTAGGATGAATAGAAGTACGACAGAATACATGCACGACGAGTTTAGTCCGCATGAGAAGAGTGAAGTTGAGATGAGGCTAGATGAGTGGTGCCAAATGCTTAGATATCTAGGCTTGTCGTTTCAGGAGACTGGAATGGCAGATGAGCGTTACTCATAGAATGTTAGATGGTTGAAAAGGAAAACTACTGAGCCAAGAGTCTTTCGAAAACAGCTCAGTAAGGGTAAGGTTTGGGTACACTCTATCTTCCTAGACCCCACTTGTGAATTACATTGGATATGTTGGTGTTGTTGTTGAAAAGGAAAACTACCACTAAGGTTTTATGTAATCAGAGGATGTCTACAAAAGTGAAAGGTAAGTTCTAAAGGACAATTATACCAATAATGTTATATATATGGTAGTGAATGTTGGATTACTAAAATCCAACATATTCACAAGATGAGTGTTCCAGAGATGTGACCGCTAAGATGGATATGTGGTCATACAAGATCAGAAAAGATTAAAAATGAGCATATTAGGCAAAAGGTGCAAGTAACACGAGTTGAGGATAAAATGAGAGAAGATCGCTTGAGATGGTTTGGTCATGTCTTTAATCGACCTACCTACGTATGCATCATTCTGTAGATGTGAAACTATGGTGATGGAAGGTGTTAAAAGGGAACTAGGTAGACCTAAAATCACGGGGAAAGAAGTTGTCTCGAAAGAGCTATAATTTCTTGGAACCAATGCAAACTTAGCTAAGAATATGACGACAATGGAAGAAAAAAATCTATATAGGTGATATTTACTTGTTGCAAATGAGTTTTTGGTCATATTAGTATGTGGATTTTGAACCTATTGTTTATCTAGGAGTATTATAACCTCATCGCAGATTTTACCTATAAAAATATCAAGAACTTTGTATGTTAAGGTGCATACAAGCTGGCCCCAACACCACGGATAACAAAGAGCACTGCTGTTGTTGTTGCTGCTAATGTGGACTTATATTCTCTGTTAATATGTTTTGCCTCTATAAGTGACATCTGGTGTGGTAAGGATGCATTTATTTTGAACTCCAATACTCCAGAAGCTGCCTAGCTCCATCTTATGCACGGCAGATCTAGCCTTTTTTATAAGCTAAAGCTGCAGTACTGATTCATTAAAATAGTTCCGATTTTGGAATCAAAGAACATAATAATAGAGTATTTTGAATTGCTTCCTTAATTTGTATTTCATAAAGTTCGATGCCAACTAATTGGGAGTAAACTTAGTGATTTTGGTACACTTATATTAGGCTGGTGTTGTAGACATACATTAGTTGGATTAAATTTGTCTTAAGAGACCAACTCGTTGACAACGGAAGGAAACTGTTTTAAAAGGTGGAATGAAAATTGAGGATTCTTCCAAAGTTATTTAGTACCGTGGCATGCTTCTTAATTGAAACTGTGAATCATCATGCTGTCAACAACTTGATTATATATTTGAAGGATCCTGAGCTGATTCTTTTTGCTTCATATTTATGGCCAGTTACCATTTCCATTGGATTGCTTGTATGCTGATCCAGACCGCAAGGTTAGTATCTGCCTATCTCCACAACTATGTGACTGCTTCATTTTGCCTTTCACGATTTTTTCTTGGAGATTTTGACACTTTCCTTGTATCTCAGGCATA</genome_strand>
        <mrna_strand>TTTTCTTCCACAAATTTTCATTTCAACCCACTTGCAATCTGCAACCATGGAATCTCTCCAGCAGAGTAGCCTAACATTTGCTACAAAATTTCCTTCTTTTTGTTCCTTCTCTCCCACTCCCAACACCTTCAAGTTTCTTCACCCTTTCCCTTCCTCTGCTATTCCTCTCACCGCCACTACACCAAAACGAATTTCTAGTTTTGTGCCTAAAGCTGCTGCTTCCACCGCTGCCTTTGCTCAAGACATTGGTGATGTACTAGCAGATGTTTCAATTTTCACTGCTACTGGTCAGTCCGTCAAGTTTGAGGACCTTTGGGATCAAAATGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGTAGCTGTTGTTGCACTTCTGAGGCATTTTGGCTGTCCTTGCTG........................................................................................................CTGGGAACTTGCTAAAGCACTCAAAGAGACAAAGGAGAGATTTGATTCTGCTGGTGTAAAGCTAATTGCAGTTGGTATTGGTGCTCCTAACAAAGCACGTATTCTTGCTGAAAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACCATTTCCATTGGATTGCTTGTATGCTGATCCAGACCGCAAG..............................................................................................GCATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E250249" ref_strand="+" ref_description="SGN-E250249 [cLEG-6-C5]">
      <seq>ttttcttccacaaattttcatttcaacccacttgcaatctgcaaccatggaatctctccagcagagtagcctaacatttgctacaaaatttccttctttttgttccttctctcccactcccaacaccttcaagtttcttcaccctttcccttcctctgctattcctctcaccgccactacaccaaaacgaatttctagttttgtgcctaaagctgctgcttccaccgctgcctttgctcaagacattggtgatgtactagcagatgtttcaattttcactgctactggtcagtccgtcaagtttgaggacctttgggatcaaaatgagggagtagctgttgttgcacttctgaggcattttggctgtccttgctgctgggaacttgctaaagcactcaaagagacaaaggagagatttgattctgctggtgtaaagctaattgcagttggtattggtgctcctaacaaagcacgtattcttgctgaaaggttaccatttccattggattgcttgtatgctga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="46098" stop="51718"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46398" g_stop="46725" g_length="328"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="328" r_length="328" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46726" i_stop="48579" i_length="1854">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.917" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="48580" g_stop="48626" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="329" r_stop="375" r_length="47" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="48627" i_stop="48730" i_length="104">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="48731" g_stop="48845" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="376" r_stop="490" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="48846" i_stop="51386" i_length="2541">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.934" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="51387" g_stop="51418" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="491" r_stop="522" r_length="32" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-E250249" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>522</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E250249" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46398" e_stop="46725"/>
          <exon e_start="48580" e_stop="48626"/>
          <exon e_start="48731" e_stop="48845"/>
          <exon e_start="51387" e_stop="51418"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTCTTCCACAAATTTTCATTTCAACCCACTTGCAATCTGCAACCATGGAATCTCTCCAGCAGAGTAGCCTAACATTTGCTACAAAATTTCCTTCTTTTTGTTCCTTCTCTCCCACTCCCAACACCTTCAAGTTTCTTCACCCTTTCCCTTCCTCTGCTATTCCTCTCACCGCCACTACACCAAAACGAATTTCTAGTTTTGTGCCTAAAGCTGCTGCTTCCACCGCTGCCTTTGCTCAAGACATTGGTGATGTACTAGCAGATGTTTCAATTTTCACTGCTACTGGTCAGTCCGTCAAGTTTGAGGACCTTTGGGATCAAAATGAGGTATTGCTATTTCACAATTCTAACAACTCAATTTCCTATTTTTGGGGATTTTTCTTTTCATCTTCCCAACTATTTGTTTTAATGTGCTGTGCAAATTTCTGGATTGCTAACACCTTGTTTGGATGGTTGTTAACGCAGTACGGTATTGTATTGTTAGTTTAAATACAATGTTTTTAAGTATCTATTTTATCTTTTGATTTAATTTCAAGATTCATTTTACGTAATGATCGAATTTGGTGTGATCCCTTATTTAAAATTATTTTTGTTGGGTTTAGCAAGTGTAAATGGGAAAAGAAAAGAGTGATATGAAAAGTGAGGGAACTATTTTGGAGTGAAAATGAAAATTTTGCAAATGAAAAGTCATTTCTCTTATATCGGCAAAAGAAAGGAAAATTGTTGTCCTTATATAAAGAGGAAACACTTCCTTTACTTCTTAAAGAGCTAAGTTCGGCAAAAATGATGTGATTGAAACAATCTTTGTTAATCAAATAAATTCTATTAAATATTATCTCTTAAATTAATTTAGAACGTTAGTTAATTAACAGAATTAATTCGTGTGATTGAATCAATTTTTGTTAATCAAATAAATTCTGTTAATATTATCTCTTATAAATTAATTTAGATCGTTAGTTAATTAGTTAATTAACGGAATTAATTCGCTGATTACAGTAACATTTCAAAAAGTTATTACTCTTTTCGAAAAGTCGTTATTTCCTAACAGACTCATTTTCCGAAAAAACGGGTCTGAACACATTTTTCTGAACAGACACGTTTCTTGCTAAAAATGACTATAAAAGGAAGTCATTTTTCGTTTTTTCAAACACTGAAATTTTCCTTCTCTGCATATATTTTTCTCTCAAAATCAAAGTGTCGATCGACTGAGTCTGTGTGACTTGTTGTTGTTCTTAAGTTCGCTGAAGTTAAAGAAGTTTGAGGTACCGCTATTTCTTTAACAGGATTAATCCATTTTATCTTGGGAGAAATTAATCCATAACCTCGTGTACAGTGGGATTAAATTTCTTAAGGAGACACGGTAGTTTCTATGGACTCGAATTATTTTGTATTTTTTCTGCTTCATCTTATTTCTGTTTCTGTTTATTTGTTAACCTTATAAATACAGGTTGATAACAATTTTAATAATTATATTTCATCTTTTATACTACCTTTTTCATAGTAGTTCAACCACGTATCCTACTTATCTATTAGGTTTATTGGTTAAATTATGGATGTGTGACATTATGTAATGACGGAGAACAATACAATCTTAAAACAATACAGTATGATACAATATAACATAATATGATACATTATGAAACAATACTTAACAATTACTCGGACAAACTGTAAAGAGAATCCTTTCTTACTATAACAATACAACAAGTGACTAATTAAGTTGTTGAGAGCCTTGATGTCGTAAATTAAATCTAGAAATAAAAACAGTAGGTGGTTCTTCTCATTTGTACTAGCCTAGGTGGTATACCTGGTGCTGGTGGGAGGTGCAAGTATCTCGTGGAATTAGTTGAGGTGTGCTAAAGGTAGGGTGGACACCATGGTCATTAAAAATTAAATAATAATAAAAAGATAACAGTATAACTAGTACATATTTAAGGTATGCCCAGGCTGACTGAAACAATAAAGAAGAAAAAAAATGGAAATTTACTTAATAGGGGCAGGAAAGATTAGAAACTTAAGGCAAACAATTCGGTGGTGCATATATGGTTTAAATGGAAAAATGGGGCTTGATGCCTATGTTATCATGGAGCTACCTATCTCCGTTTCATGAATTTCAAATGGCTGACCGACGTTTTCTGGTAGCATAATTACATTTTGTTATTGGGTCGTTATCTTCACCAGGGAGTAGCTGTTGTTGCACTTCTGAGGCATTTTGGCTGTCCTTGCTGGTAAATTATGACCTCACTTTTTCTATCAAGACTTTTTGTTTTGGTGTTTTATATACAATTTTTGTTTTTGATATTCTTGTTCGATATGCATTGCTGTTTGTTAGCTGGGAACTTGCTAAAGCACTCAAAGAGACAAAGGAGAGATTTGATTCTGCTGGTGTAAAGCTAATTGCAGTTGGTATTGGTGCTCCTAACAAAGCACGTATTCTTGCTGAAAGGGTATCTTCATTTCACCTTGGCTGTTACTTCGAATGATTTAGTTCTTTGACATATTATTTCTAATGTTTCAAATAAGCTAGTTAAGGTCATACATGTCATATCAAACTTCTGGCTCAATTGACTCCATGAACTTAAGGTTCCTTCAGAAACATATTTAAATTCAAAGTTGAAGTTTTTGTTTGAATTGTTTCGTTCAAATATGAAATCCATGAGTGGAAGTTGAATATTTGTGAAAACTTACTCGAAATATGCCTTCAACTTGAAAAAATTTATTCAAGTTTAAGTTACAATTGCGTTCTCAGTTTCATGAATTAAAGTTGACATGCAAGCTTAAATCTCTTTATTTGCAAGTCAAGTCCACAAACAAACACCACATAATTGATTCAAGAAATGTCAAAATGTGGTTTCTGCAAGAAAATAGTGTCACTTGCCTCAACTATTGACTGACCTTAGTTTGGAAGCAATAGAACTATATGTCGTCGGTTGAAATTTGATACTGTTTGTCCGAATTTGCCTCTATTCTGATTTGGAAGAAGTTTGCTTGATTTTGCTACTTAAATATAGAGTTAGTATGTCCTAAACAGAGAACCAATATGGACTTATGCATGGTATATCTACAACAAAGGCTATATTTCTGCTAAGAAGATTGATCAAAATTTATCAAGAAAGATCTAAACATGGTGTCATCGAGAGAAAACATATGATAAAGTACCATGAAAGGTCCTCTGGTCCTTTGGTGGGTGATGGAAAAGAAAATAGTCCATATTAAATATCTTAAGGCCATAAAGGACATGTATAAAGAAGTTGTTACTAGTGTGAAAATAGTAGGAGATACAAAAAAGAATTCCTATAACATTGAGTCTATAACAGAGATTGATATTGAGTCCCTACTTGTTTACCTAGTTATGAATGAGCTAACCACCAAAATACAAGATGGTTCTATGGGGTGTATTTGCTGACAAAAGTGTTGATTGCTGAAACCAACAGGGATGTCAACCAGAAGCTTGATCAATGGGGAAGCAGTTAGATACGGGTTTTAGGATGAATAGAAGTACGACAGAATACATGCACGACGAGTTTAGTCCGCATGAGAAGAGTGAAGTTGAGATGAGGCTAGATGAGTGGTGCCAAATGCTTAGATATCTAGGCTTGTCGTTTCAGGAGACTGGAATGGCAGATGAGCGTTACTCATAGAATGTTAGATGGTTGAAAAGGAAAACTACTGAGCCAAGAGTCTTTCGAAAACAGCTCAGTAAGGGTAAGGTTTGGGTACACTCTATCTTCCTAGACCCCACTTGTGAATTACATTGGATATGTTGGTGTTGTTGTTGAAAAGGAAAACTACCACTAAGGTTTTATGTAATCAGAGGATGTCTACAAAAGTGAAAGGTAAGTTCTAAAGGACAATTATACCAATAATGTTATATATATGGTAGTGAATGTTGGATTACTAAAATCCAACATATTCACAAGATGAGTGTTCCAGAGATGTGACCGCTAAGATGGATATGTGGTCATACAAGATCAGAAAAGATTAAAAATGAGCATATTAGGCAAAAGGTGCAAGTAACACGAGTTGAGGATAAAATGAGAGAAGATCGCTTGAGATGGTTTGGTCATGTCTTTAATCGACCTACCTACGTATGCATCATTCTGTAGATGTGAAACTATGGTGATGGAAGGTGTTAAAAGGGAACTAGGTAGACCTAAAATCACGGGGAAAGAAGTTGTCTCGAAAGAGCTATAATTTCTTGGAACCAATGCAAACTTAGCTAAGAATATGACGACAATGGAAGAAAAAAATCTATATAGGTGATATTTACTTGTTGCAAATGAGTTTTTGGTCATATTAGTATGTGGATTTTGAACCTATTGTTTATCTAGGAGTATTATAACCTCATCGCAGATTTTACCTATAAAAATATCAAGAACTTTGTATGTTAAGGTGCATACAAGCTGGCCCCAACACCACGGATAACAAAGAGCACTGCTGTTGTTGTTGCTGCTAATGTGGACTTATATTCTCTGTTAATATGTTTTGCCTCTATAAGTGACATCTGGTGTGGTAAGGATGCATTTATTTTGAACTCCAATACTCCAGAAGCTGCCTAGCTCCATCTTATGCACGGCAGATCTAGCCTTTTTTATAAGCTAAAGCTGCAGTACTGATTCATTAAAATAGTTCCGATTTTGGAATCAAAGAACATAATAATAGAGTATTTTGAATTGCTTCCTTAATTTGTATTTCATAAAGTTCGATGCCAACTAATTGGGAGTAAACTTAGTGATTTTGGTACACTTATATTAGGCTGGTGTTGTAGACATACATTAGTTGGATTAAATTTGTCTTAAGAGACCAACTCGTTGACAACGGAAGGAAACTGTTTTAAAAGGTGGAATGAAAATTGAGGATTCTTCCAAAGTTATTTAGTACCGTGGCATGCTTCTTAATTGAAACTGTGAATCATCATGCTGTCAACAACTTGATTATATATTTGAAGGATCCTGAGCTGATTCTTTTTGCTTCATATTTATGGCCAGTTACCATTTCCATTGGATTGCTTGTATGCTGA</genome_strand>
        <mrna_strand>TTTTCTTCCACAAATTTTCATTTCAACCCACTTGCAATCTGCAACCATGGAATCTCTCCAGCAGAGTAGCCTAACATTTGCTACAAAATTTCCTTCTTTTTGTTCCTTCTCTCCCACTCCCAACACCTTCAAGTTTCTTCACCCTTTCCCTTCCTCTGCTATTCCTCTCACCGCCACTACACCAAAACGAATTTCTAGTTTTGTGCCTAAAGCTGCTGCTTCCACCGCTGCCTTTGCTCAAGACATTGGTGATGTACTAGCAGATGTTTCAATTTTCACTGCTACTGGTCAGTCCGTCAAGTTTGAGGACCTTTGGGATCAAAATGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGTAGCTGTTGTTGCACTTCTGAGGCATTTTGGCTGTCCTTGCTG........................................................................................................CTGGGAACTTGCTAAAGCACTCAAAGAGACAAAGGAGAGATTTGATTCTGCTGGTGTAAAGCTAATTGCAGTTGGTATTGGTGCTCCTAACAAAGCACGTATTCTTGCTGAAAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACCATTTCCATTGGATTGCTTGTATGCTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E729654" ref_strand="+" ref_description="SGN-E729654 [LA21CG11]">
      <seq>gcaatctgcaaccatggaatctctccagcagagtagcctaacatttgctacaaaatttccttctttttgttccttctctcccactcccaacaccttcaagtttcttcaccctttcccttcctctgctattcctctcaccgccactacaccaaaacgaatttctagttttgtgcctaaagctgctgcttccaccgctgcctttgctcaagacattggtgatgtactagcagatgtttcaattttcactgctactggtcagtccgtcaagtttgaggacctttgggatcaaaatgagggagtagctgttgttgcacttctgaggcattttggctgtccttgctgctgggaacttgctaaagcactcaaagagacaaaggagagatttgattctgctggtgtaaagctaattgcagttggtattggtgctcctaacaaagcacgtattcttgctgaaaggttaccatttccattggattgcttgtatgctgatccagaccgcaaggcatacgatgttctaggcctgtattatggtgttggccgcacatttttcaacccagctagtgctaaagtgctctctagattcaatgaactgcgggaagctacgaagaactacaccattgaagcaacccctgatgacagaagtggtgtcttgcagcagggagggatgtttctgtttaaagggaagcagttgttgtatgcatggaaggatgaagggaccggtgaccatgctcctatggaagatatctttgatatttgctgcaaagttcctgttgcataaatgccttcaatctgtgtttcatctctattcgaatttcaaagggaagtggatgcatatattgggtta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="46131" stop="53401"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46431" g_stop="46725" g_length="295"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="295" r_length="295" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46726" i_stop="48579" i_length="1854">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.917" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="48580" g_stop="48626" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="296" r_stop="342" r_length="47" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="48627" i_stop="48730" i_length="104">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="48731" g_stop="48845" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="343" r_stop="457" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="48846" i_stop="51386" i_length="2541">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.934" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="51387" g_stop="51431" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="458" r_stop="502" r_length="45" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="51432" i_stop="51525" i_length="94">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.937" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="51526" g_stop="51585" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="503" r_stop="562" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="51586" i_stop="51675" i_length="90">
            <donor d_prob="0.571" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="51676" g_stop="51771" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="563" r_stop="658" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="51772" i_stop="52915" i_length="1144">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="52916" g_stop="53101" g_length="186"/>
          <reference_exon_boundary r_type="cDNA" r_start="659" r_stop="844" r_length="186" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-E729654" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>844</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E729654" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46431" e_stop="46725"/>
          <exon e_start="48580" e_stop="48626"/>
          <exon e_start="48731" e_stop="48845"/>
          <exon e_start="51387" e_stop="51431"/>
          <exon e_start="51526" e_stop="51585"/>
          <exon e_start="51676" e_stop="51771"/>
          <exon e_start="52916" e_stop="53101"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAATCTGCAACCATGGAATCTCTCCAGCAGAGTAGCCTAACATTTGCTACAAAATTTCCTTCTTTTTGTTCCTTCTCTCCCACTCCCAACACCTTCAAGTTTCTTCACCCTTTCCCTTCCTCTGCTATTCCTCTCACCGCCACTACACCAAAACGAATTTCTAGTTTTGTGCCTAAAGCTGCTGCTTCCACCGCTGCCTTTGCTCAAGACATTGGTGATGTACTAGCAGATGTTTCAATTTTCACTGCTACTGGTCAGTCCGTCAAGTTTGAGGACCTTTGGGATCAAAATGAGGTATTGCTATTTCACAATTCTAACAACTCAATTTCCTATTTTTGGGGATTTTTCTTTTCATCTTCCCAACTATTTGTTTTAATGTGCTGTGCAAATTTCTGGATTGCTAACACCTTGTTTGGATGGTTGTTAACGCAGTACGGTATTGTATTGTTAGTTTAAATACAATGTTTTTAAGTATCTATTTTATCTTTTGATTTAATTTCAAGATTCATTTTACGTAATGATCGAATTTGGTGTGATCCCTTATTTAAAATTATTTTTGTTGGGTTTAGCAAGTGTAAATGGGAAAAGAAAAGAGTGATATGAAAAGTGAGGGAACTATTTTGGAGTGAAAATGAAAATTTTGCAAATGAAAAGTCATTTCTCTTATATCGGCAAAAGAAAGGAAAATTGTTGTCCTTATATAAAGAGGAAACACTTCCTTTACTTCTTAAAGAGCTAAGTTCGGCAAAAATGATGTGATTGAAACAATCTTTGTTAATCAAATAAATTCTATTAAATATTATCTCTTAAATTAATTTAGAACGTTAGTTAATTAACAGAATTAATTCGTGTGATTGAATCAATTTTTGTTAATCAAATAAATTCTGTTAATATTATCTCTTATAAATTAATTTAGATCGTTAGTTAATTAGTTAATTAACGGAATTAATTCGCTGATTACAGTAACATTTCAAAAAGTTATTACTCTTTTCGAAAAGTCGTTATTTCCTAACAGACTCATTTTCCGAAAAAACGGGTCTGAACACATTTTTCTGAACAGACACGTTTCTTGCTAAAAATGACTATAAAAGGAAGTCATTTTTCGTTTTTTCAAACACTGAAATTTTCCTTCTCTGCATATATTTTTCTCTCAAAATCAAAGTGTCGATCGACTGAGTCTGTGTGACTTGTTGTTGTTCTTAAGTTCGCTGAAGTTAAAGAAGTTTGAGGTACCGCTATTTCTTTAACAGGATTAATCCATTTTATCTTGGGAGAAATTAATCCATAACCTCGTGTACAGTGGGATTAAATTTCTTAAGGAGACACGGTAGTTTCTATGGACTCGAATTATTTTGTATTTTTTCTGCTTCATCTTATTTCTGTTTCTGTTTATTTGTTAACCTTATAAATACAGGTTGATAACAATTTTAATAATTATATTTCATCTTTTATACTACCTTTTTCATAGTAGTTCAACCACGTATCCTACTTATCTATTAGGTTTATTGGTTAAATTATGGATGTGTGACATTATGTAATGACGGAGAACAATACAATCTTAAAACAATACAGTATGATACAATATAACATAATATGATACATTATGAAACAATACTTAACAATTACTCGGACAAACTGTAAAGAGAATCCTTTCTTACTATAACAATACAACAAGTGACTAATTAAGTTGTTGAGAGCCTTGATGTCGTAAATTAAATCTAGAAATAAAAACAGTAGGTGGTTCTTCTCATTTGTACTAGCCTAGGTGGTATACCTGGTGCTGGTGGGAGGTGCAAGTATCTCGTGGAATTAGTTGAGGTGTGCTAAAGGTAGGGTGGACACCATGGTCATTAAAAATTAAATAATAATAAAAAGATAACAGTATAACTAGTACATATTTAAGGTATGCCCAGGCTGACTGAAACAATAAAGAAGAAAAAAAATGGAAATTTACTTAATAGGGGCAGGAAAGATTAGAAACTTAAGGCAAACAATTCGGTGGTGCATATATGGTTTAAATGGAAAAATGGGGCTTGATGCCTATGTTATCATGGAGCTACCTATCTCCGTTTCATGAATTTCAAATGGCTGACCGACGTTTTCTGGTAGCATAATTACATTTTGTTATTGGGTCGTTATCTTCACCAGGGAGTAGCTGTTGTTGCACTTCTGAGGCATTTTGGCTGTCCTTGCTGGTAAATTATGACCTCACTTTTTCTATCAAGACTTTTTGTTTTGGTGTTTTATATACAATTTTTGTTTTTGATATTCTTGTTCGATATGCATTGCTGTTTGTTAGCTGGGAACTTGCTAAAGCACTCAAAGAGACAAAGGAGAGATTTGATTCTGCTGGTGTAAAGCTAATTGCAGTTGGTATTGGTGCTCCTAACAAAGCACGTATTCTTGCTGAAAGGGTATCTTCATTTCACCTTGGCTGTTACTTCGAATGATTTAGTTCTTTGACATATTATTTCTAATGTTTCAAATAAGCTAGTTAAGGTCATACATGTCATATCAAACTTCTGGCTCAATTGACTCCATGAACTTAAGGTTCCTTCAGAAACATATTTAAATTCAAAGTTGAAGTTTTTGTTTGAATTGTTTCGTTCAAATATGAAATCCATGAGTGGAAGTTGAATATTTGTGAAAACTTACTCGAAATATGCCTTCAACTTGAAAAAATTTATTCAAGTTTAAGTTACAATTGCGTTCTCAGTTTCATGAATTAAAGTTGACATGCAAGCTTAAATCTCTTTATTTGCAAGTCAAGTCCACAAACAAACACCACATAATTGATTCAAGAAATGTCAAAATGTGGTTTCTGCAAGAAAATAGTGTCACTTGCCTCAACTATTGACTGACCTTAGTTTGGAAGCAATAGAACTATATGTCGTCGGTTGAAATTTGATACTGTTTGTCCGAATTTGCCTCTATTCTGATTTGGAAGAAGTTTGCTTGATTTTGCTACTTAAATATAGAGTTAGTATGTCCTAAACAGAGAACCAATATGGACTTATGCATGGTATATCTACAACAAAGGCTATATTTCTGCTAAGAAGATTGATCAAAATTTATCAAGAAAGATCTAAACATGGTGTCATCGAGAGAAAACATATGATAAAGTACCATGAAAGGTCCTCTGGTCCTTTGGTGGGTGATGGAAAAGAAAATAGTCCATATTAAATATCTTAAGGCCATAAAGGACATGTATAAAGAAGTTGTTACTAGTGTGAAAATAGTAGGAGATACAAAAAAGAATTCCTATAACATTGAGTCTATAACAGAGATTGATATTGAGTCCCTACTTGTTTACCTAGTTATGAATGAGCTAACCACCAAAATACAAGATGGTTCTATGGGGTGTATTTGCTGACAAAAGTGTTGATTGCTGAAACCAACAGGGATGTCAACCAGAAGCTTGATCAATGGGGAAGCAGTTAGATACGGGTTTTAGGATGAATAGAAGTACGACAGAATACATGCACGACGAGTTTAGTCCGCATGAGAAGAGTGAAGTTGAGATGAGGCTAGATGAGTGGTGCCAAATGCTTAGATATCTAGGCTTGTCGTTTCAGGAGACTGGAATGGCAGATGAGCGTTACTCATAGAATGTTAGATGGTTGAAAAGGAAAACTACTGAGCCAAGAGTCTTTCGAAAACAGCTCAGTAAGGGTAAGGTTTGGGTACACTCTATCTTCCTAGACCCCACTTGTGAATTACATTGGATATGTTGGTGTTGTTGTTGAAAAGGAAAACTACCACTAAGGTTTTATGTAATCAGAGGATGTCTACAAAAGTGAAAGGTAAGTTCTAAAGGACAATTATACCAATAATGTTATATATATGGTAGTGAATGTTGGATTACTAAAATCCAACATATTCACAAGATGAGTGTTCCAGAGATGTGACCGCTAAGATGGATATGTGGTCATACAAGATCAGAAAAGATTAAAAATGAGCATATTAGGCAAAAGGTGCAAGTAACACGAGTTGAGGATAAAATGAGAGAAGATCGCTTGAGATGGTTTGGTCATGTCTTTAATCGACCTACCTACGTATGCATCATTCTGTAGATGTGAAACTATGGTGATGGAAGGTGTTAAAAGGGAACTAGGTAGACCTAAAATCACGGGGAAAGAAGTTGTCTCGAAAGAGCTATAATTTCTTGGAACCAATGCAAACTTAGCTAAGAATATGACGACAATGGAAGAAAAAAATCTATATAGGTGATATTTACTTGTTGCAAATGAGTTTTTGGTCATATTAGTATGTGGATTTTGAACCTATTGTTTATCTAGGAGTATTATAACCTCATCGCAGATTTTACCTATAAAAATATCAAGAACTTTGTATGTTAAGGTGCATACAAGCTGGCCCCAACACCACGGATAACAAAGAGCACTGCTGTTGTTGTTGCTGCTAATGTGGACTTATATTCTCTGTTAATATGTTTTGCCTCTATAAGTGACATCTGGTGTGGTAAGGATGCATTTATTTTGAACTCCAATACTCCAGAAGCTGCCTAGCTCCATCTTATGCACGGCAGATCTAGCCTTTTTTATAAGCTAAAGCTGCAGTACTGATTCATTAAAATAGTTCCGATTTTGGAATCAAAGAACATAATAATAGAGTATTTTGAATTGCTTCCTTAATTTGTATTTCATAAAGTTCGATGCCAACTAATTGGGAGTAAACTTAGTGATTTTGGTACACTTATATTAGGCTGGTGTTGTAGACATACATTAGTTGGATTAAATTTGTCTTAAGAGACCAACTCGTTGACAACGGAAGGAAACTGTTTTAAAAGGTGGAATGAAAATTGAGGATTCTTCCAAAGTTATTTAGTACCGTGGCATGCTTCTTAATTGAAACTGTGAATCATCATGCTGTCAACAACTTGATTATATATTTGAAGGATCCTGAGCTGATTCTTTTTGCTTCATATTTATGGCCAGTTACCATTTCCATTGGATTGCTTGTATGCTGATCCAGACCGCAAGGTTAGTATCTGCCTATCTCCACAACTATGTGACTGCTTCATTTTGCCTTTCACGATTTTTTCTTGGAGATTTTGACACTTTCCTTGTATCTCAGGCATACGATGTTCTAGGCCTGTATTATGGTGTTGGCCGCACATTTTTCAACCCAGCTAGTGTAATGATCTCAAGGAGTTTCCCTTCATAAAAATGATCATTCTGCTCCATGAGAATGACTTGATCTTTAACTAATTTTTTCCCTTGTCAGGCTAAAGTGCTCTCTAGATTCAATGAACTGCGGGAAGCTACGAAGAACTACACCATTGAAGCAACCCCTGATGACAGAAGTGGTGTCTTGCAGCAGGTTTAAGCTCTTTCTTCTACTGCTGCATTGTTATTCATGAATTAGGGGTGTCATGTTTAGCCCATAAAAATATAACCTGTCCAACACATCCAGACTTGAGCGGGTTAGTCTGGGTATATATTAGTTGGCATAACCCAAGTTAAACTCATTTAAAATCTTAGGACAATTTGTACTTCATATGTAGCCAAAGTTAGCTCATGTAAAAGATTGGTTCAATTTACGCTTGTATATGAAGCCCAAATTGACCCATACAAAAGCTTATCGAACATAGAAAAGTAAGCATGCACCCAAGGGTGTGGCCTAGTGGCCAATAAAGTAGTTAAGAGCATTGAAGTCTCAGGTTCAAATCTCAGATGGAGACAAAAAACACTAGGAGAATTCTTCCCATTTGTTCTAGCCCTGATCGACATAGTTACCTGGTACCTGCTGTTGCGCAAAAGCTGGCCCGGACACCACGGTTATCCAAAAAGAGAAAAGTTGGCCTTTTTGAGTTTGATTTATTTGATATAGCTATGATAAACAAAAGAATAAAGCTTTATTAGTTTGATTTAGTAATTAGACAAAGTATAAAAGAACAAATGAACCATAAATTGACTTGGATGGCTTGGGGTTATGAACTACTCCCTCCATCCACTATTGTTTTTCATGTATACTAAAAATAGTTGTCCAAAACTTGATTGTCACTTAAAACAATCAAGAAACAATTGGTCTTTTTTTTCTTTTCAATTCTGCCCTTAATAATTACATAACTACTTATTTCAAAAAGTAACCATTTAAAAGTTACAAGACTACTTTAATGTGAAAGAAAAGTTGTTTTTACAATTTTCAAAAAGTACAAACCATTTTAATAATGATTGATAATAGGGTTATATTAGTCAAATTGCACCTTATATTAAATTTTTCTTTAAGGGTTGTGCATGATCTTATCCTTACAAACAATAGTGGACGGAGGGAGTATTGTTTAGTCTAAATTAGTTGGCTCATCGTCAACCGAGAAACTATTGAGTGGGTTGTGATCCAGCCCGTATATCATGTTGACCCAAATATAGTCCAACCCGCTCATTTGACACCCGTACAATCAAGATTTCCGTCAAGCTCTTGGTTTATGTCGAGATAGTAATATTCGTTTGTATGTTGATACCAGGGAGGGATGTTTCTGTTTAAAGGGAAGCAGTTGTTGTATGCATGGAAGGATGAAGGGACCGGTGACCATGCTCCTATGGAAGATATCTTTGATATTTGCTGCAAAGTTCCTGTTGCATAAATGCCTTCAATCTGTGTTTCATCTCTATTCGAATTTCCAAGGGAAGTGGATGCATATATTGGTTTA</genome_strand>
        <mrna_strand>GCAATCTGCAACCATGGAATCTCTCCAGCAGAGTAGCCTAACATTTGCTACAAAATTTCCTTCTTTTTGTTCCTTCTCTCCCACTCCCAACACCTTCAAGTTTCTTCACCCTTTCCCTTCCTCTGCTATTCCTCTCACCGCCACTACACCAAAACGAATTTCTAGTTTTGTGCCTAAAGCTGCTGCTTCCACCGCTGCCTTTGCTCAAGACATTGGTGATGTACTAGCAGATGTTTCAATTTTCACTGCTACTGGTCAGTCCGTCAAGTTTGAGGACCTTTGGGATCAAAATGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGTAGCTGTTGTTGCACTTCTGAGGCATTTTGGCTGTCCTTGCTG........................................................................................................CTGGGAACTTGCTAAAGCACTCAAAGAGACAAAGGAGAGATTTGATTCTGCTGGTGTAAAGCTAATTGCAGTTGGTATTGGTGCTCCTAACAAAGCACGTATTCTTGCTGAAAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACCATTTCCATTGGATTGCTTGTATGCTGATCCAGACCGCAAG..............................................................................................GCATACGATGTTCTAGGCCTGTATTATGGTGTTGGCCGCACATTTTTCAACCCAGCTAGT..........................................................................................GCTAAAGTGCTCTCTAGATTCAATGAACTGCGGGAAGCTACGAAGAACTACACCATTGAAGCAACCCCTGATGACAGAAGTGGTGTCTTGCAGCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGGATGTTTCTGTTTAAAGGGAAGCAGTTGTTGTATGCATGGAAGGATGAAGGGACCGGTGACCATGCTCCTATGGAAGATATCTTTGATATTTGCTGCAAAGTTCCTGTTGCATAAATGCCTTCAATCTGTGTTTCATCTCTATTCGAATTTCAAAGGGAAGTGGATGCATATATTGGGTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E342951" ref_strand="+" ref_description="SGN-E342951 [cTOF-11-M24]">
      <seq>caatctgcaaccatggaatctctccagcagagtagcctaacatttgctacaaaatttccttctttttgttccttctctcccactcccaacaccttcaagtttcttcaccctttcccttcctctgctattcctctcaccgccactacaccaaaacgaatttctagttttgtgcctaaagctgctgcttccaccgctgcctttgctcaagacattggtgatgtactagcagatgtttcaattttcactgctactggtcagtccgtcaagtttgaggacctttgggatcaaaatgagggagtagctgttgttgcacttctgaggcattttggctgtccttgctgctgggaacttgctaaagcactcaaagagacaaaggagagatttgattctgctggtgtaaagctaattgcagttggtattggtgctcctaacaaagcacgtattcttgctgaaaggttaccatttccattggattgcttgtatgctgatccagaccgcaaggcatacgatgttctaggcctgtattatggtgttggccgcacatttttcaacccagctagtgctaaagtgctctctagattcaatgaactgcgggaagctacgaagaactacaccattgaagcaacccctgatgacagaagtggtgtcttgcagcanggagggatgtttctgtttaaagggaagcagttgttgtatgca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="46132" stop="53257"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46432" g_stop="46725" g_length="294"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="294" r_length="294" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46726" i_stop="48579" i_length="1854">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.917" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="48580" g_stop="48626" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="295" r_stop="341" r_length="47" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="48627" i_stop="48730" i_length="104">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="48731" g_stop="48845" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="342" r_stop="456" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="48846" i_stop="51386" i_length="2541">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.934" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="51387" g_stop="51431" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="457" r_stop="501" r_length="45" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="51432" i_stop="51525" i_length="94">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.937" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="51526" g_stop="51585" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="502" r_stop="561" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="51586" i_stop="51675" i_length="90">
            <donor d_prob="0.571" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="51676" g_stop="51771" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="562" r_stop="657" r_length="96" r_score="0.990"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="51772" i_stop="52915" i_length="1144">
            <donor d_prob="0.991" d_score="0.98"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="52916" g_stop="52957" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="658" r_stop="699" r_length="42" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-E342951" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>699</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E342951" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46432" e_stop="46725"/>
          <exon e_start="48580" e_stop="48626"/>
          <exon e_start="48731" e_stop="48845"/>
          <exon e_start="51387" e_stop="51431"/>
          <exon e_start="51526" e_stop="51585"/>
          <exon e_start="51676" e_stop="51771"/>
          <exon e_start="52916" e_stop="52957"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATCTGCAACCATGGAATCTCTCCAGCAGAGTAGCCTAACATTTGCTACAAAATTTCCTTCTTTTTGTTCCTTCTCTCCCACTCCCAACACCTTCAAGTTTCTTCACCCTTTCCCTTCCTCTGCTATTCCTCTCACCGCCACTACACCAAAACGAATTTCTAGTTTTGTGCCTAAAGCTGCTGCTTCCACCGCTGCCTTTGCTCAAGACATTGGTGATGTACTAGCAGATGTTTCAATTTTCACTGCTACTGGTCAGTCCGTCAAGTTTGAGGACCTTTGGGATCAAAATGAGGTATTGCTATTTCACAATTCTAACAACTCAATTTCCTATTTTTGGGGATTTTTCTTTTCATCTTCCCAACTATTTGTTTTAATGTGCTGTGCAAATTTCTGGATTGCTAACACCTTGTTTGGATGGTTGTTAACGCAGTACGGTATTGTATTGTTAGTTTAAATACAATGTTTTTAAGTATCTATTTTATCTTTTGATTTAATTTCAAGATTCATTTTACGTAATGATCGAATTTGGTGTGATCCCTTATTTAAAATTATTTTTGTTGGGTTTAGCAAGTGTAAATGGGAAAAGAAAAGAGTGATATGAAAAGTGAGGGAACTATTTTGGAGTGAAAATGAAAATTTTGCAAATGAAAAGTCATTTCTCTTATATCGGCAAAAGAAAGGAAAATTGTTGTCCTTATATAAAGAGGAAACACTTCCTTTACTTCTTAAAGAGCTAAGTTCGGCAAAAATGATGTGATTGAAACAATCTTTGTTAATCAAATAAATTCTATTAAATATTATCTCTTAAATTAATTTAGAACGTTAGTTAATTAACAGAATTAATTCGTGTGATTGAATCAATTTTTGTTAATCAAATAAATTCTGTTAATATTATCTCTTATAAATTAATTTAGATCGTTAGTTAATTAGTTAATTAACGGAATTAATTCGCTGATTACAGTAACATTTCAAAAAGTTATTACTCTTTTCGAAAAGTCGTTATTTCCTAACAGACTCATTTTCCGAAAAAACGGGTCTGAACACATTTTTCTGAACAGACACGTTTCTTGCTAAAAATGACTATAAAAGGAAGTCATTTTTCGTTTTTTCAAACACTGAAATTTTCCTTCTCTGCATATATTTTTCTCTCAAAATCAAAGTGTCGATCGACTGAGTCTGTGTGACTTGTTGTTGTTCTTAAGTTCGCTGAAGTTAAAGAAGTTTGAGGTACCGCTATTTCTTTAACAGGATTAATCCATTTTATCTTGGGAGAAATTAATCCATAACCTCGTGTACAGTGGGATTAAATTTCTTAAGGAGACACGGTAGTTTCTATGGACTCGAATTATTTTGTATTTTTTCTGCTTCATCTTATTTCTGTTTCTGTTTATTTGTTAACCTTATAAATACAGGTTGATAACAATTTTAATAATTATATTTCATCTTTTATACTACCTTTTTCATAGTAGTTCAACCACGTATCCTACTTATCTATTAGGTTTATTGGTTAAATTATGGATGTGTGACATTATGTAATGACGGAGAACAATACAATCTTAAAACAATACAGTATGATACAATATAACATAATATGATACATTATGAAACAATACTTAACAATTACTCGGACAAACTGTAAAGAGAATCCTTTCTTACTATAACAATACAACAAGTGACTAATTAAGTTGTTGAGAGCCTTGATGTCGTAAATTAAATCTAGAAATAAAAACAGTAGGTGGTTCTTCTCATTTGTACTAGCCTAGGTGGTATACCTGGTGCTGGTGGGAGGTGCAAGTATCTCGTGGAATTAGTTGAGGTGTGCTAAAGGTAGGGTGGACACCATGGTCATTAAAAATTAAATAATAATAAAAAGATAACAGTATAACTAGTACATATTTAAGGTATGCCCAGGCTGACTGAAACAATAAAGAAGAAAAAAAATGGAAATTTACTTAATAGGGGCAGGAAAGATTAGAAACTTAAGGCAAACAATTCGGTGGTGCATATATGGTTTAAATGGAAAAATGGGGCTTGATGCCTATGTTATCATGGAGCTACCTATCTCCGTTTCATGAATTTCAAATGGCTGACCGACGTTTTCTGGTAGCATAATTACATTTTGTTATTGGGTCGTTATCTTCACCAGGGAGTAGCTGTTGTTGCACTTCTGAGGCATTTTGGCTGTCCTTGCTGGTAAATTATGACCTCACTTTTTCTATCAAGACTTTTTGTTTTGGTGTTTTATATACAATTTTTGTTTTTGATATTCTTGTTCGATATGCATTGCTGTTTGTTAGCTGGGAACTTGCTAAAGCACTCAAAGAGACAAAGGAGAGATTTGATTCTGCTGGTGTAAAGCTAATTGCAGTTGGTATTGGTGCTCCTAACAAAGCACGTATTCTTGCTGAAAGGGTATCTTCATTTCACCTTGGCTGTTACTTCGAATGATTTAGTTCTTTGACATATTATTTCTAATGTTTCAAATAAGCTAGTTAAGGTCATACATGTCATATCAAACTTCTGGCTCAATTGACTCCATGAACTTAAGGTTCCTTCAGAAACATATTTAAATTCAAAGTTGAAGTTTTTGTTTGAATTGTTTCGTTCAAATATGAAATCCATGAGTGGAAGTTGAATATTTGTGAAAACTTACTCGAAATATGCCTTCAACTTGAAAAAATTTATTCAAGTTTAAGTTACAATTGCGTTCTCAGTTTCATGAATTAAAGTTGACATGCAAGCTTAAATCTCTTTATTTGCAAGTCAAGTCCACAAACAAACACCACATAATTGATTCAAGAAATGTCAAAATGTGGTTTCTGCAAGAAAATAGTGTCACTTGCCTCAACTATTGACTGACCTTAGTTTGGAAGCAATAGAACTATATGTCGTCGGTTGAAATTTGATACTGTTTGTCCGAATTTGCCTCTATTCTGATTTGGAAGAAGTTTGCTTGATTTTGCTACTTAAATATAGAGTTAGTATGTCCTAAACAGAGAACCAATATGGACTTATGCATGGTATATCTACAACAAAGGCTATATTTCTGCTAAGAAGATTGATCAAAATTTATCAAGAAAGATCTAAACATGGTGTCATCGAGAGAAAACATATGATAAAGTACCATGAAAGGTCCTCTGGTCCTTTGGTGGGTGATGGAAAAGAAAATAGTCCATATTAAATATCTTAAGGCCATAAAGGACATGTATAAAGAAGTTGTTACTAGTGTGAAAATAGTAGGAGATACAAAAAAGAATTCCTATAACATTGAGTCTATAACAGAGATTGATATTGAGTCCCTACTTGTTTACCTAGTTATGAATGAGCTAACCACCAAAATACAAGATGGTTCTATGGGGTGTATTTGCTGACAAAAGTGTTGATTGCTGAAACCAACAGGGATGTCAACCAGAAGCTTGATCAATGGGGAAGCAGTTAGATACGGGTTTTAGGATGAATAGAAGTACGACAGAATACATGCACGACGAGTTTAGTCCGCATGAGAAGAGTGAAGTTGAGATGAGGCTAGATGAGTGGTGCCAAATGCTTAGATATCTAGGCTTGTCGTTTCAGGAGACTGGAATGGCAGATGAGCGTTACTCATAGAATGTTAGATGGTTGAAAAGGAAAACTACTGAGCCAAGAGTCTTTCGAAAACAGCTCAGTAAGGGTAAGGTTTGGGTACACTCTATCTTCCTAGACCCCACTTGTGAATTACATTGGATATGTTGGTGTTGTTGTTGAAAAGGAAAACTACCACTAAGGTTTTATGTAATCAGAGGATGTCTACAAAAGTGAAAGGTAAGTTCTAAAGGACAATTATACCAATAATGTTATATATATGGTAGTGAATGTTGGATTACTAAAATCCAACATATTCACAAGATGAGTGTTCCAGAGATGTGACCGCTAAGATGGATATGTGGTCATACAAGATCAGAAAAGATTAAAAATGAGCATATTAGGCAAAAGGTGCAAGTAACACGAGTTGAGGATAAAATGAGAGAAGATCGCTTGAGATGGTTTGGTCATGTCTTTAATCGACCTACCTACGTATGCATCATTCTGTAGATGTGAAACTATGGTGATGGAAGGTGTTAAAAGGGAACTAGGTAGACCTAAAATCACGGGGAAAGAAGTTGTCTCGAAAGAGCTATAATTTCTTGGAACCAATGCAAACTTAGCTAAGAATATGACGACAATGGAAGAAAAAAATCTATATAGGTGATATTTACTTGTTGCAAATGAGTTTTTGGTCATATTAGTATGTGGATTTTGAACCTATTGTTTATCTAGGAGTATTATAACCTCATCGCAGATTTTACCTATAAAAATATCAAGAACTTTGTATGTTAAGGTGCATACAAGCTGGCCCCAACACCACGGATAACAAAGAGCACTGCTGTTGTTGTTGCTGCTAATGTGGACTTATATTCTCTGTTAATATGTTTTGCCTCTATAAGTGACATCTGGTGTGGTAAGGATGCATTTATTTTGAACTCCAATACTCCAGAAGCTGCCTAGCTCCATCTTATGCACGGCAGATCTAGCCTTTTTTATAAGCTAAAGCTGCAGTACTGATTCATTAAAATAGTTCCGATTTTGGAATCAAAGAACATAATAATAGAGTATTTTGAATTGCTTCCTTAATTTGTATTTCATAAAGTTCGATGCCAACTAATTGGGAGTAAACTTAGTGATTTTGGTACACTTATATTAGGCTGGTGTTGTAGACATACATTAGTTGGATTAAATTTGTCTTAAGAGACCAACTCGTTGACAACGGAAGGAAACTGTTTTAAAAGGTGGAATGAAAATTGAGGATTCTTCCAAAGTTATTTAGTACCGTGGCATGCTTCTTAATTGAAACTGTGAATCATCATGCTGTCAACAACTTGATTATATATTTGAAGGATCCTGAGCTGATTCTTTTTGCTTCATATTTATGGCCAGTTACCATTTCCATTGGATTGCTTGTATGCTGATCCAGACCGCAAGGTTAGTATCTGCCTATCTCCACAACTATGTGACTGCTTCATTTTGCCTTTCACGATTTTTTCTTGGAGATTTTGACACTTTCCTTGTATCTCAGGCATACGATGTTCTAGGCCTGTATTATGGTGTTGGCCGCACATTTTTCAACCCAGCTAGTGTAATGATCTCAAGGAGTTTCCCTTCATAAAAATGATCATTCTGCTCCATGAGAATGACTTGATCTTTAACTAATTTTTTCCCTTGTCAGGCTAAAGTGCTCTCTAGATTCAATGAACTGCGGGAAGCTACGAAGAACTACACCATTGAAGCAACCCCTGATGACAGAAGTGGTGTCTTGCAGCAGGTTTAAGCTCTTTCTTCTACTGCTGCATTGTTATTCATGAATTAGGGGTGTCATGTTTAGCCCATAAAAATATAACCTGTCCAACACATCCAGACTTGAGCGGGTTAGTCTGGGTATATATTAGTTGGCATAACCCAAGTTAAACTCATTTAAAATCTTAGGACAATTTGTACTTCATATGTAGCCAAAGTTAGCTCATGTAAAAGATTGGTTCAATTTACGCTTGTATATGAAGCCCAAATTGACCCATACAAAAGCTTATCGAACATAGAAAAGTAAGCATGCACCCAAGGGTGTGGCCTAGTGGCCAATAAAGTAGTTAAGAGCATTGAAGTCTCAGGTTCAAATCTCAGATGGAGACAAAAAACACTAGGAGAATTCTTCCCATTTGTTCTAGCCCTGATCGACATAGTTACCTGGTACCTGCTGTTGCGCAAAAGCTGGCCCGGACACCACGGTTATCCAAAAAGAGAAAAGTTGGCCTTTTTGAGTTTGATTTATTTGATATAGCTATGATAAACAAAAGAATAAAGCTTTATTAGTTTGATTTAGTAATTAGACAAAGTATAAAAGAACAAATGAACCATAAATTGACTTGGATGGCTTGGGGTTATGAACTACTCCCTCCATCCACTATTGTTTTTCATGTATACTAAAAATAGTTGTCCAAAACTTGATTGTCACTTAAAACAATCAAGAAACAATTGGTCTTTTTTTTCTTTTCAATTCTGCCCTTAATAATTACATAACTACTTATTTCAAAAAGTAACCATTTAAAAGTTACAAGACTACTTTAATGTGAAAGAAAAGTTGTTTTTACAATTTTCAAAAAGTACAAACCATTTTAATAATGATTGATAATAGGGTTATATTAGTCAAATTGCACCTTATATTAAATTTTTCTTTAAGGGTTGTGCATGATCTTATCCTTACAAACAATAGTGGACGGAGGGAGTATTGTTTAGTCTAAATTAGTTGGCTCATCGTCAACCGAGAAACTATTGAGTGGGTTGTGATCCAGCCCGTATATCATGTTGACCCAAATATAGTCCAACCCGCTCATTTGACACCCGTACAATCAAGATTTCCGTCAAGCTCTTGGTTTATGTCGAGATAGTAATATTCGTTTGTATGTTGATACCAGGGAGGGATGTTTCTGTTTAAAGGGAAGCAGTTGTTGTATGCA</genome_strand>
        <mrna_strand>CAATCTGCAACCATGGAATCTCTCCAGCAGAGTAGCCTAACATTTGCTACAAAATTTCCTTCTTTTTGTTCCTTCTCTCCCACTCCCAACACCTTCAAGTTTCTTCACCCTTTCCCTTCCTCTGCTATTCCTCTCACCGCCACTACACCAAAACGAATTTCTAGTTTTGTGCCTAAAGCTGCTGCTTCCACCGCTGCCTTTGCTCAAGACATTGGTGATGTACTAGCAGATGTTTCAATTTTCACTGCTACTGGTCAGTCCGTCAAGTTTGAGGACCTTTGGGATCAAAATGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGTAGCTGTTGTTGCACTTCTGAGGCATTTTGGCTGTCCTTGCTG........................................................................................................CTGGGAACTTGCTAAAGCACTCAAAGAGACAAAGGAGAGATTTGATTCTGCTGGTGTAAAGCTAATTGCAGTTGGTATTGGTGCTCCTAACAAAGCACGTATTCTTGCTGAAAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACCATTTCCATTGGATTGCTTGTATGCTGATCCAGACCGCAAG..............................................................................................GCATACGATGTTCTAGGCCTGTATTATGGTGTTGGCCGCACATTTTTCAACCCAGCTAGT..........................................................................................GCTAAAGTGCTCTCTAGATTCAATGAACTGCGGGAAGCTACGAAGAACTACACCATTGAAGCAACCCCTGATGACAGAAGTGGTGTCTTGCAGCAN........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGGATGTTTCTGTTTAAAGGGAAGCAGTTGTTGTATGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E731918" ref_strand="+" ref_description="SGN-E731918 [LA28CC05]">
      <seq>ctgcaaccatggtcatttcaccagcagagtagcctaacatttgctacaaaatttccttctttttgttccttctctcccactcccaacaccttcaagtttcttcaccctttcccttcctctgctattcctctcaccgccactacaccaaaacgaatttctagttttgtgcctaaagctgctgcttccaccgctgcctttgctcaagacattggtgatgtactagcagatgtttcaattttcactgctactggtcagtccgtcaagtttgaggacctttgggatcaaaatgagggagtagctgttgttgcacttctgaggcattttggctgtccttgctgctgggaacttgctaaagcactcaaagagacaaaggagagatttgattctgctggtgtaaagctaattgcagttggtattggtgctcctaacaaagcacgtattcttgctgaaaggttaccatttccattggattgcttgtatgctgatccagaccgcaaggcatacgatgttctaggcctgtattatggtgttggccgcacatttttcaacccagctagtgctaaagtgctctctagattcaatgaactgcgggaagctacgaagaactacaccattgaagcaacccctgatgacagaagtggtgtcttgcagcagggagggatgtttctgtttaaagggaagcagttgttgtatgcatggaaggatgaagggaccggtgaccatgctcctatggaagatatctttgatatttgctgcaaagttcctgttgcataaatgccttcaatctgtgtttcatctctattcgaatttccaagggaagtggatgcatatattggtttagttctctaattgtatatgttgaatgtaattctgaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="46136" stop="53438"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46436" g_stop="46725" g_length="290"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="291" r_length="291" r_score="0.983"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46726" i_stop="48579" i_length="1854">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.917" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="48580" g_stop="48626" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="292" r_stop="338" r_length="47" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="48627" i_stop="48730" i_length="104">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="48731" g_stop="48845" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="339" r_stop="453" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="48846" i_stop="51386" i_length="2541">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.934" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="51387" g_stop="51431" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="454" r_stop="498" r_length="45" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="51432" i_stop="51525" i_length="94">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.937" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="51526" g_stop="51585" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="499" r_stop="558" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="51586" i_stop="51675" i_length="90">
            <donor d_prob="0.571" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="51676" g_stop="51771" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="559" r_stop="654" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="51772" i_stop="52915" i_length="1144">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="52916" g_stop="53138" g_length="223"/>
          <reference_exon_boundary r_type="cDNA" r_start="655" r_stop="877" r_length="223" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-E731918" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>876</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E731918" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46436" e_stop="46725"/>
          <exon e_start="48580" e_stop="48626"/>
          <exon e_start="48731" e_stop="48845"/>
          <exon e_start="51387" e_stop="51431"/>
          <exon e_start="51526" e_stop="51585"/>
          <exon e_start="51676" e_stop="51771"/>
          <exon e_start="52916" e_stop="53138"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGCAACCATGG-AATCTCTCCAGCAGAGTAGCCTAACATTTGCTACAAAATTTCCTTCTTTTTGTTCCTTCTCTCCCACTCCCAACACCTTCAAGTTTCTTCACCCTTTCCCTTCCTCTGCTATTCCTCTCACCGCCACTACACCAAAACGAATTTCTAGTTTTGTGCCTAAAGCTGCTGCTTCCACCGCTGCCTTTGCTCAAGACATTGGTGATGTACTAGCAGATGTTTCAATTTTCACTGCTACTGGTCAGTCCGTCAAGTTTGAGGACCTTTGGGATCAAAATGAGGTATTGCTATTTCACAATTCTAACAACTCAATTTCCTATTTTTGGGGATTTTTCTTTTCATCTTCCCAACTATTTGTTTTAATGTGCTGTGCAAATTTCTGGATTGCTAACACCTTGTTTGGATGGTTGTTAACGCAGTACGGTATTGTATTGTTAGTTTAAATACAATGTTTTTAAGTATCTATTTTATCTTTTGATTTAATTTCAAGATTCATTTTACGTAATGATCGAATTTGGTGTGATCCCTTATTTAAAATTATTTTTGTTGGGTTTAGCAAGTGTAAATGGGAAAAGAAAAGAGTGATATGAAAAGTGAGGGAACTATTTTGGAGTGAAAATGAAAATTTTGCAAATGAAAAGTCATTTCTCTTATATCGGCAAAAGAAAGGAAAATTGTTGTCCTTATATAAAGAGGAAACACTTCCTTTACTTCTTAAAGAGCTAAGTTCGGCAAAAATGATGTGATTGAAACAATCTTTGTTAATCAAATAAATTCTATTAAATATTATCTCTTAAATTAATTTAGAACGTTAGTTAATTAACAGAATTAATTCGTGTGATTGAATCAATTTTTGTTAATCAAATAAATTCTGTTAATATTATCTCTTATAAATTAATTTAGATCGTTAGTTAATTAGTTAATTAACGGAATTAATTCGCTGATTACAGTAACATTTCAAAAAGTTATTACTCTTTTCGAAAAGTCGTTATTTCCTAACAGACTCATTTTCCGAAAAAACGGGTCTGAACACATTTTTCTGAACAGACACGTTTCTTGCTAAAAATGACTATAAAAGGAAGTCATTTTTCGTTTTTTCAAACACTGAAATTTTCCTTCTCTGCATATATTTTTCTCTCAAAATCAAAGTGTCGATCGACTGAGTCTGTGTGACTTGTTGTTGTTCTTAAGTTCGCTGAAGTTAAAGAAGTTTGAGGTACCGCTATTTCTTTAACAGGATTAATCCATTTTATCTTGGGAGAAATTAATCCATAACCTCGTGTACAGTGGGATTAAATTTCTTAAGGAGACACGGTAGTTTCTATGGACTCGAATTATTTTGTATTTTTTCTGCTTCATCTTATTTCTGTTTCTGTTTATTTGTTAACCTTATAAATACAGGTTGATAACAATTTTAATAATTATATTTCATCTTTTATACTACCTTTTTCATAGTAGTTCAACCACGTATCCTACTTATCTATTAGGTTTATTGGTTAAATTATGGATGTGTGACATTATGTAATGACGGAGAACAATACAATCTTAAAACAATACAGTATGATACAATATAACATAATATGATACATTATGAAACAATACTTAACAATTACTCGGACAAACTGTAAAGAGAATCCTTTCTTACTATAACAATACAACAAGTGACTAATTAAGTTGTTGAGAGCCTTGATGTCGTAAATTAAATCTAGAAATAAAAACAGTAGGTGGTTCTTCTCATTTGTACTAGCCTAGGTGGTATACCTGGTGCTGGTGGGAGGTGCAAGTATCTCGTGGAATTAGTTGAGGTGTGCTAAAGGTAGGGTGGACACCATGGTCATTAAAAATTAAATAATAATAAAAAGATAACAGTATAACTAGTACATATTTAAGGTATGCCCAGGCTGACTGAAACAATAAAGAAGAAAAAAAATGGAAATTTACTTAATAGGGGCAGGAAAGATTAGAAACTTAAGGCAAACAATTCGGTGGTGCATATATGGTTTAAATGGAAAAATGGGGCTTGATGCCTATGTTATCATGGAGCTACCTATCTCCGTTTCATGAATTTCAAATGGCTGACCGACGTTTTCTGGTAGCATAATTACATTTTGTTATTGGGTCGTTATCTTCACCAGGGAGTAGCTGTTGTTGCACTTCTGAGGCATTTTGGCTGTCCTTGCTGGTAAATTATGACCTCACTTTTTCTATCAAGACTTTTTGTTTTGGTGTTTTATATACAATTTTTGTTTTTGATATTCTTGTTCGATATGCATTGCTGTTTGTTAGCTGGGAACTTGCTAAAGCACTCAAAGAGACAAAGGAGAGATTTGATTCTGCTGGTGTAAAGCTAATTGCAGTTGGTATTGGTGCTCCTAACAAAGCACGTATTCTTGCTGAAAGGGTATCTTCATTTCACCTTGGCTGTTACTTCGAATGATTTAGTTCTTTGACATATTATTTCTAATGTTTCAAATAAGCTAGTTAAGGTCATACATGTCATATCAAACTTCTGGCTCAATTGACTCCATGAACTTAAGGTTCCTTCAGAAACATATTTAAATTCAAAGTTGAAGTTTTTGTTTGAATTGTTTCGTTCAAATATGAAATCCATGAGTGGAAGTTGAATATTTGTGAAAACTTACTCGAAATATGCCTTCAACTTGAAAAAATTTATTCAAGTTTAAGTTACAATTGCGTTCTCAGTTTCATGAATTAAAGTTGACATGCAAGCTTAAATCTCTTTATTTGCAAGTCAAGTCCACAAACAAACACCACATAATTGATTCAAGAAATGTCAAAATGTGGTTTCTGCAAGAAAATAGTGTCACTTGCCTCAACTATTGACTGACCTTAGTTTGGAAGCAATAGAACTATATGTCGTCGGTTGAAATTTGATACTGTTTGTCCGAATTTGCCTCTATTCTGATTTGGAAGAAGTTTGCTTGATTTTGCTACTTAAATATAGAGTTAGTATGTCCTAAACAGAGAACCAATATGGACTTATGCATGGTATATCTACAACAAAGGCTATATTTCTGCTAAGAAGATTGATCAAAATTTATCAAGAAAGATCTAAACATGGTGTCATCGAGAGAAAACATATGATAAAGTACCATGAAAGGTCCTCTGGTCCTTTGGTGGGTGATGGAAAAGAAAATAGTCCATATTAAATATCTTAAGGCCATAAAGGACATGTATAAAGAAGTTGTTACTAGTGTGAAAATAGTAGGAGATACAAAAAAGAATTCCTATAACATTGAGTCTATAACAGAGATTGATATTGAGTCCCTACTTGTTTACCTAGTTATGAATGAGCTAACCACCAAAATACAAGATGGTTCTATGGGGTGTATTTGCTGACAAAAGTGTTGATTGCTGAAACCAACAGGGATGTCAACCAGAAGCTTGATCAATGGGGAAGCAGTTAGATACGGGTTTTAGGATGAATAGAAGTACGACAGAATACATGCACGACGAGTTTAGTCCGCATGAGAAGAGTGAAGTTGAGATGAGGCTAGATGAGTGGTGCCAAATGCTTAGATATCTAGGCTTGTCGTTTCAGGAGACTGGAATGGCAGATGAGCGTTACTCATAGAATGTTAGATGGTTGAAAAGGAAAACTACTGAGCCAAGAGTCTTTCGAAAACAGCTCAGTAAGGGTAAGGTTTGGGTACACTCTATCTTCCTAGACCCCACTTGTGAATTACATTGGATATGTTGGTGTTGTTGTTGAAAAGGAAAACTACCACTAAGGTTTTATGTAATCAGAGGATGTCTACAAAAGTGAAAGGTAAGTTCTAAAGGACAATTATACCAATAATGTTATATATATGGTAGTGAATGTTGGATTACTAAAATCCAACATATTCACAAGATGAGTGTTCCAGAGATGTGACCGCTAAGATGGATATGTGGTCATACAAGATCAGAAAAGATTAAAAATGAGCATATTAGGCAAAAGGTGCAAGTAACACGAGTTGAGGATAAAATGAGAGAAGATCGCTTGAGATGGTTTGGTCATGTCTTTAATCGACCTACCTACGTATGCATCATTCTGTAGATGTGAAACTATGGTGATGGAAGGTGTTAAAAGGGAACTAGGTAGACCTAAAATCACGGGGAAAGAAGTTGTCTCGAAAGAGCTATAATTTCTTGGAACCAATGCAAACTTAGCTAAGAATATGACGACAATGGAAGAAAAAAATCTATATAGGTGATATTTACTTGTTGCAAATGAGTTTTTGGTCATATTAGTATGTGGATTTTGAACCTATTGTTTATCTAGGAGTATTATAACCTCATCGCAGATTTTACCTATAAAAATATCAAGAACTTTGTATGTTAAGGTGCATACAAGCTGGCCCCAACACCACGGATAACAAAGAGCACTGCTGTTGTTGTTGCTGCTAATGTGGACTTATATTCTCTGTTAATATGTTTTGCCTCTATAAGTGACATCTGGTGTGGTAAGGATGCATTTATTTTGAACTCCAATACTCCAGAAGCTGCCTAGCTCCATCTTATGCACGGCAGATCTAGCCTTTTTTATAAGCTAAAGCTGCAGTACTGATTCATTAAAATAGTTCCGATTTTGGAATCAAAGAACATAATAATAGAGTATTTTGAATTGCTTCCTTAATTTGTATTTCATAAAGTTCGATGCCAACTAATTGGGAGTAAACTTAGTGATTTTGGTACACTTATATTAGGCTGGTGTTGTAGACATACATTAGTTGGATTAAATTTGTCTTAAGAGACCAACTCGTTGACAACGGAAGGAAACTGTTTTAAAAGGTGGAATGAAAATTGAGGATTCTTCCAAAGTTATTTAGTACCGTGGCATGCTTCTTAATTGAAACTGTGAATCATCATGCTGTCAACAACTTGATTATATATTTGAAGGATCCTGAGCTGATTCTTTTTGCTTCATATTTATGGCCAGTTACCATTTCCATTGGATTGCTTGTATGCTGATCCAGACCGCAAGGTTAGTATCTGCCTATCTCCACAACTATGTGACTGCTTCATTTTGCCTTTCACGATTTTTTCTTGGAGATTTTGACACTTTCCTTGTATCTCAGGCATACGATGTTCTAGGCCTGTATTATGGTGTTGGCCGCACATTTTTCAACCCAGCTAGTGTAATGATCTCAAGGAGTTTCCCTTCATAAAAATGATCATTCTGCTCCATGAGAATGACTTGATCTTTAACTAATTTTTTCCCTTGTCAGGCTAAAGTGCTCTCTAGATTCAATGAACTGCGGGAAGCTACGAAGAACTACACCATTGAAGCAACCCCTGATGACAGAAGTGGTGTCTTGCAGCAGGTTTAAGCTCTTTCTTCTACTGCTGCATTGTTATTCATGAATTAGGGGTGTCATGTTTAGCCCATAAAAATATAACCTGTCCAACACATCCAGACTTGAGCGGGTTAGTCTGGGTATATATTAGTTGGCATAACCCAAGTTAAACTCATTTAAAATCTTAGGACAATTTGTACTTCATATGTAGCCAAAGTTAGCTCATGTAAAAGATTGGTTCAATTTACGCTTGTATATGAAGCCCAAATTGACCCATACAAAAGCTTATCGAACATAGAAAAGTAAGCATGCACCCAAGGGTGTGGCCTAGTGGCCAATAAAGTAGTTAAGAGCATTGAAGTCTCAGGTTCAAATCTCAGATGGAGACAAAAAACACTAGGAGAATTCTTCCCATTTGTTCTAGCCCTGATCGACATAGTTACCTGGTACCTGCTGTTGCGCAAAAGCTGGCCCGGACACCACGGTTATCCAAAAAGAGAAAAGTTGGCCTTTTTGAGTTTGATTTATTTGATATAGCTATGATAAACAAAAGAATAAAGCTTTATTAGTTTGATTTAGTAATTAGACAAAGTATAAAAGAACAAATGAACCATAAATTGACTTGGATGGCTTGGGGTTATGAACTACTCCCTCCATCCACTATTGTTTTTCATGTATACTAAAAATAGTTGTCCAAAACTTGATTGTCACTTAAAACAATCAAGAAACAATTGGTCTTTTTTTTCTTTTCAATTCTGCCCTTAATAATTACATAACTACTTATTTCAAAAAGTAACCATTTAAAAGTTACAAGACTACTTTAATGTGAAAGAAAAGTTGTTTTTACAATTTTCAAAAAGTACAAACCATTTTAATAATGATTGATAATAGGGTTATATTAGTCAAATTGCACCTTATATTAAATTTTTCTTTAAGGGTTGTGCATGATCTTATCCTTACAAACAATAGTGGACGGAGGGAGTATTGTTTAGTCTAAATTAGTTGGCTCATCGTCAACCGAGAAACTATTGAGTGGGTTGTGATCCAGCCCGTATATCATGTTGACCCAAATATAGTCCAACCCGCTCATTTGACACCCGTACAATCAAGATTTCCGTCAAGCTCTTGGTTTATGTCGAGATAGTAATATTCGTTTGTATGTTGATACCAGGGAGGGATGTTTCTGTTTAAAGGGAAGCAGTTGTTGTATGCATGGAAGGATGAAGGGACCGGTGACCATGCTCCTATGGAAGATATCTTTGATATTTGCTGCAAAGTTCCTGTTGCATAAATGCCTTCAATCTGTGTTTCATCTCTATTCGAATTTCCAAGGGAAGTGGATGCATATATTGGTTTAGTTCTCTAATTGTATATGTTGTATGTAATTCTGAAAC</genome_strand>
        <mrna_strand>CTGCAACCATGGTCATTTCACCAGCAGAGTAGCCTAACATTTGCTACAAAATTTCCTTCTTTTTGTTCCTTCTCTCCCACTCCCAACACCTTCAAGTTTCTTCACCCTTTCCCTTCCTCTGCTATTCCTCTCACCGCCACTACACCAAAACGAATTTCTAGTTTTGTGCCTAAAGCTGCTGCTTCCACCGCTGCCTTTGCTCAAGACATTGGTGATGTACTAGCAGATGTTTCAATTTTCACTGCTACTGGTCAGTCCGTCAAGTTTGAGGACCTTTGGGATCAAAATGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGTAGCTGTTGTTGCACTTCTGAGGCATTTTGGCTGTCCTTGCTG........................................................................................................CTGGGAACTTGCTAAAGCACTCAAAGAGACAAAGGAGAGATTTGATTCTGCTGGTGTAAAGCTAATTGCAGTTGGTATTGGTGCTCCTAACAAAGCACGTATTCTTGCTGAAAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACCATTTCCATTGGATTGCTTGTATGCTGATCCAGACCGCAAG..............................................................................................GCATACGATGTTCTAGGCCTGTATTATGGTGTTGGCCGCACATTTTTCAACCCAGCTAGT..........................................................................................GCTAAAGTGCTCTCTAGATTCAATGAACTGCGGGAAGCTACGAAGAACTACACCATTGAAGCAACCCCTGATGACAGAAGTGGTGTCTTGCAGCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGGATGTTTCTGTTTAAAGGGAAGCAGTTGTTGTATGCATGGAAGGATGAAGGGACCGGTGACCATGCTCCTATGGAAGATATCTTTGATATTTGCTGCAAAGTTCCTGTTGCATAAATGCCTTCAATCTGTGTTTCATCTCTATTCGAATTTCCAAGGGAAGTGGATGCATATATTGGTTTAGTTCTCTAATTGTATATGTTGAATGTAATTCTGAAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E730526" ref_strand="+" ref_description="SGN-E730526 [LA24BF03]">
      <seq>ccaattatggaatctctccagcagagtagcctaacatttgctacaaaatttccttctttttgttccttctctcccactcccaacaccttcaagtttcttcaccctttcccttcctctgctattcctctcaccgccactacaccaaaacgaatttctagttttgtgcctaaagctgctgcttccaccgctgcctttgctcaagacattggtgatgtactagcagatgtttcaattttcactgctactggtcagtccgtcaagtttgaggacctttgggatcaaaatgagggagtagctgttgttgcacttctgaggcattttggctgtccttgctgctgggaacttgctaaagcactcaaagagacaaaggagagatttgattctgctggtgtaaagctaattgcagttggtattggtgctcctaacaaagcacgtattcttgctgaaaggttaccatttccattggattgcttgtatgctgatccagaccgcaaggcatacgatgttctaggcctgtattatggtgttggccgcacatttttcaacccagctagtgctaaagtgctctctagattcaatgaactgcgggaagctacgaagaactacaccattgaagcaacccctgatgacagaagtggtgtcttgcagcagggagggatgtttctgtttaaagggaagcagttgttgtatgcatggaaggatgaagggaccggtgaccatgctcctatggaagatatctttgatatttgctgcaaagttcctgttgcataaatgccttcaatctgtgtttcatctctattcgaattccaagggaaatggatgcatatat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="46139" stop="53394"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46438" g_stop="46725" g_length="288"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="288" r_length="288" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46726" i_stop="48579" i_length="1854">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.917" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="48580" g_stop="48626" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="289" r_stop="335" r_length="47" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="48627" i_stop="48730" i_length="104">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="48731" g_stop="48845" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="336" r_stop="450" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="48846" i_stop="51386" i_length="2541">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.934" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="51387" g_stop="51431" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="451" r_stop="495" r_length="45" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="51432" i_stop="51525" i_length="94">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.937" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="51526" g_stop="51585" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="496" r_stop="555" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="51586" i_stop="51675" i_length="90">
            <donor d_prob="0.571" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="51676" g_stop="51771" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="556" r_stop="651" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="51772" i_stop="52915" i_length="1144">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="52916" g_stop="53094" g_length="179"/>
          <reference_exon_boundary r_type="cDNA" r_start="652" r_stop="829" r_length="178" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-E730526" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>830</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E730526" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46438" e_stop="46725"/>
          <exon e_start="48580" e_stop="48626"/>
          <exon e_start="48731" e_stop="48845"/>
          <exon e_start="51387" e_stop="51431"/>
          <exon e_start="51526" e_stop="51585"/>
          <exon e_start="51676" e_stop="51771"/>
          <exon e_start="52916" e_stop="53094"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAACCATGGAATCTCTCCAGCAGAGTAGCCTAACATTTGCTACAAAATTTCCTTCTTTTTGTTCCTTCTCTCCCACTCCCAACACCTTCAAGTTTCTTCACCCTTTCCCTTCCTCTGCTATTCCTCTCACCGCCACTACACCAAAACGAATTTCTAGTTTTGTGCCTAAAGCTGCTGCTTCCACCGCTGCCTTTGCTCAAGACATTGGTGATGTACTAGCAGATGTTTCAATTTTCACTGCTACTGGTCAGTCCGTCAAGTTTGAGGACCTTTGGGATCAAAATGAGGTATTGCTATTTCACAATTCTAACAACTCAATTTCCTATTTTTGGGGATTTTTCTTTTCATCTTCCCAACTATTTGTTTTAATGTGCTGTGCAAATTTCTGGATTGCTAACACCTTGTTTGGATGGTTGTTAACGCAGTACGGTATTGTATTGTTAGTTTAAATACAATGTTTTTAAGTATCTATTTTATCTTTTGATTTAATTTCAAGATTCATTTTACGTAATGATCGAATTTGGTGTGATCCCTTATTTAAAATTATTTTTGTTGGGTTTAGCAAGTGTAAATGGGAAAAGAAAAGAGTGATATGAAAAGTGAGGGAACTATTTTGGAGTGAAAATGAAAATTTTGCAAATGAAAAGTCATTTCTCTTATATCGGCAAAAGAAAGGAAAATTGTTGTCCTTATATAAAGAGGAAACACTTCCTTTACTTCTTAAAGAGCTAAGTTCGGCAAAAATGATGTGATTGAAACAATCTTTGTTAATCAAATAAATTCTATTAAATATTATCTCTTAAATTAATTTAGAACGTTAGTTAATTAACAGAATTAATTCGTGTGATTGAATCAATTTTTGTTAATCAAATAAATTCTGTTAATATTATCTCTTATAAATTAATTTAGATCGTTAGTTAATTAGTTAATTAACGGAATTAATTCGCTGATTACAGTAACATTTCAAAAAGTTATTACTCTTTTCGAAAAGTCGTTATTTCCTAACAGACTCATTTTCCGAAAAAACGGGTCTGAACACATTTTTCTGAACAGACACGTTTCTTGCTAAAAATGACTATAAAAGGAAGTCATTTTTCGTTTTTTCAAACACTGAAATTTTCCTTCTCTGCATATATTTTTCTCTCAAAATCAAAGTGTCGATCGACTGAGTCTGTGTGACTTGTTGTTGTTCTTAAGTTCGCTGAAGTTAAAGAAGTTTGAGGTACCGCTATTTCTTTAACAGGATTAATCCATTTTATCTTGGGAGAAATTAATCCATAACCTCGTGTACAGTGGGATTAAATTTCTTAAGGAGACACGGTAGTTTCTATGGACTCGAATTATTTTGTATTTTTTCTGCTTCATCTTATTTCTGTTTCTGTTTATTTGTTAACCTTATAAATACAGGTTGATAACAATTTTAATAATTATATTTCATCTTTTATACTACCTTTTTCATAGTAGTTCAACCACGTATCCTACTTATCTATTAGGTTTATTGGTTAAATTATGGATGTGTGACATTATGTAATGACGGAGAACAATACAATCTTAAAACAATACAGTATGATACAATATAACATAATATGATACATTATGAAACAATACTTAACAATTACTCGGACAAACTGTAAAGAGAATCCTTTCTTACTATAACAATACAACAAGTGACTAATTAAGTTGTTGAGAGCCTTGATGTCGTAAATTAAATCTAGAAATAAAAACAGTAGGTGGTTCTTCTCATTTGTACTAGCCTAGGTGGTATACCTGGTGCTGGTGGGAGGTGCAAGTATCTCGTGGAATTAGTTGAGGTGTGCTAAAGGTAGGGTGGACACCATGGTCATTAAAAATTAAATAATAATAAAAAGATAACAGTATAACTAGTACATATTTAAGGTATGCCCAGGCTGACTGAAACAATAAAGAAGAAAAAAAATGGAAATTTACTTAATAGGGGCAGGAAAGATTAGAAACTTAAGGCAAACAATTCGGTGGTGCATATATGGTTTAAATGGAAAAATGGGGCTTGATGCCTATGTTATCATGGAGCTACCTATCTCCGTTTCATGAATTTCAAATGGCTGACCGACGTTTTCTGGTAGCATAATTACATTTTGTTATTGGGTCGTTATCTTCACCAGGGAGTAGCTGTTGTTGCACTTCTGAGGCATTTTGGCTGTCCTTGCTGGTAAATTATGACCTCACTTTTTCTATCAAGACTTTTTGTTTTGGTGTTTTATATACAATTTTTGTTTTTGATATTCTTGTTCGATATGCATTGCTGTTTGTTAGCTGGGAACTTGCTAAAGCACTCAAAGAGACAAAGGAGAGATTTGATTCTGCTGGTGTAAAGCTAATTGCAGTTGGTATTGGTGCTCCTAACAAAGCACGTATTCTTGCTGAAAGGGTATCTTCATTTCACCTTGGCTGTTACTTCGAATGATTTAGTTCTTTGACATATTATTTCTAATGTTTCAAATAAGCTAGTTAAGGTCATACATGTCATATCAAACTTCTGGCTCAATTGACTCCATGAACTTAAGGTTCCTTCAGAAACATATTTAAATTCAAAGTTGAAGTTTTTGTTTGAATTGTTTCGTTCAAATATGAAATCCATGAGTGGAAGTTGAATATTTGTGAAAACTTACTCGAAATATGCCTTCAACTTGAAAAAATTTATTCAAGTTTAAGTTACAATTGCGTTCTCAGTTTCATGAATTAAAGTTGACATGCAAGCTTAAATCTCTTTATTTGCAAGTCAAGTCCACAAACAAACACCACATAATTGATTCAAGAAATGTCAAAATGTGGTTTCTGCAAGAAAATAGTGTCACTTGCCTCAACTATTGACTGACCTTAGTTTGGAAGCAATAGAACTATATGTCGTCGGTTGAAATTTGATACTGTTTGTCCGAATTTGCCTCTATTCTGATTTGGAAGAAGTTTGCTTGATTTTGCTACTTAAATATAGAGTTAGTATGTCCTAAACAGAGAACCAATATGGACTTATGCATGGTATATCTACAACAAAGGCTATATTTCTGCTAAGAAGATTGATCAAAATTTATCAAGAAAGATCTAAACATGGTGTCATCGAGAGAAAACATATGATAAAGTACCATGAAAGGTCCTCTGGTCCTTTGGTGGGTGATGGAAAAGAAAATAGTCCATATTAAATATCTTAAGGCCATAAAGGACATGTATAAAGAAGTTGTTACTAGTGTGAAAATAGTAGGAGATACAAAAAAGAATTCCTATAACATTGAGTCTATAACAGAGATTGATATTGAGTCCCTACTTGTTTACCTAGTTATGAATGAGCTAACCACCAAAATACAAGATGGTTCTATGGGGTGTATTTGCTGACAAAAGTGTTGATTGCTGAAACCAACAGGGATGTCAACCAGAAGCTTGATCAATGGGGAAGCAGTTAGATACGGGTTTTAGGATGAATAGAAGTACGACAGAATACATGCACGACGAGTTTAGTCCGCATGAGAAGAGTGAAGTTGAGATGAGGCTAGATGAGTGGTGCCAAATGCTTAGATATCTAGGCTTGTCGTTTCAGGAGACTGGAATGGCAGATGAGCGTTACTCATAGAATGTTAGATGGTTGAAAAGGAAAACTACTGAGCCAAGAGTCTTTCGAAAACAGCTCAGTAAGGGTAAGGTTTGGGTACACTCTATCTTCCTAGACCCCACTTGTGAATTACATTGGATATGTTGGTGTTGTTGTTGAAAAGGAAAACTACCACTAAGGTTTTATGTAATCAGAGGATGTCTACAAAAGTGAAAGGTAAGTTCTAAAGGACAATTATACCAATAATGTTATATATATGGTAGTGAATGTTGGATTACTAAAATCCAACATATTCACAAGATGAGTGTTCCAGAGATGTGACCGCTAAGATGGATATGTGGTCATACAAGATCAGAAAAGATTAAAAATGAGCATATTAGGCAAAAGGTGCAAGTAACACGAGTTGAGGATAAAATGAGAGAAGATCGCTTGAGATGGTTTGGTCATGTCTTTAATCGACCTACCTACGTATGCATCATTCTGTAGATGTGAAACTATGGTGATGGAAGGTGTTAAAAGGGAACTAGGTAGACCTAAAATCACGGGGAAAGAAGTTGTCTCGAAAGAGCTATAATTTCTTGGAACCAATGCAAACTTAGCTAAGAATATGACGACAATGGAAGAAAAAAATCTATATAGGTGATATTTACTTGTTGCAAATGAGTTTTTGGTCATATTAGTATGTGGATTTTGAACCTATTGTTTATCTAGGAGTATTATAACCTCATCGCAGATTTTACCTATAAAAATATCAAGAACTTTGTATGTTAAGGTGCATACAAGCTGGCCCCAACACCACGGATAACAAAGAGCACTGCTGTTGTTGTTGCTGCTAATGTGGACTTATATTCTCTGTTAATATGTTTTGCCTCTATAAGTGACATCTGGTGTGGTAAGGATGCATTTATTTTGAACTCCAATACTCCAGAAGCTGCCTAGCTCCATCTTATGCACGGCAGATCTAGCCTTTTTTATAAGCTAAAGCTGCAGTACTGATTCATTAAAATAGTTCCGATTTTGGAATCAAAGAACATAATAATAGAGTATTTTGAATTGCTTCCTTAATTTGTATTTCATAAAGTTCGATGCCAACTAATTGGGAGTAAACTTAGTGATTTTGGTACACTTATATTAGGCTGGTGTTGTAGACATACATTAGTTGGATTAAATTTGTCTTAAGAGACCAACTCGTTGACAACGGAAGGAAACTGTTTTAAAAGGTGGAATGAAAATTGAGGATTCTTCCAAAGTTATTTAGTACCGTGGCATGCTTCTTAATTGAAACTGTGAATCATCATGCTGTCAACAACTTGATTATATATTTGAAGGATCCTGAGCTGATTCTTTTTGCTTCATATTTATGGCCAGTTACCATTTCCATTGGATTGCTTGTATGCTGATCCAGACCGCAAGGTTAGTATCTGCCTATCTCCACAACTATGTGACTGCTTCATTTTGCCTTTCACGATTTTTTCTTGGAGATTTTGACACTTTCCTTGTATCTCAGGCATACGATGTTCTAGGCCTGTATTATGGTGTTGGCCGCACATTTTTCAACCCAGCTAGTGTAATGATCTCAAGGAGTTTCCCTTCATAAAAATGATCATTCTGCTCCATGAGAATGACTTGATCTTTAACTAATTTTTTCCCTTGTCAGGCTAAAGTGCTCTCTAGATTCAATGAACTGCGGGAAGCTACGAAGAACTACACCATTGAAGCAACCCCTGATGACAGAAGTGGTGTCTTGCAGCAGGTTTAAGCTCTTTCTTCTACTGCTGCATTGTTATTCATGAATTAGGGGTGTCATGTTTAGCCCATAAAAATATAACCTGTCCAACACATCCAGACTTGAGCGGGTTAGTCTGGGTATATATTAGTTGGCATAACCCAAGTTAAACTCATTTAAAATCTTAGGACAATTTGTACTTCATATGTAGCCAAAGTTAGCTCATGTAAAAGATTGGTTCAATTTACGCTTGTATATGAAGCCCAAATTGACCCATACAAAAGCTTATCGAACATAGAAAAGTAAGCATGCACCCAAGGGTGTGGCCTAGTGGCCAATAAAGTAGTTAAGAGCATTGAAGTCTCAGGTTCAAATCTCAGATGGAGACAAAAAACACTAGGAGAATTCTTCCCATTTGTTCTAGCCCTGATCGACATAGTTACCTGGTACCTGCTGTTGCGCAAAAGCTGGCCCGGACACCACGGTTATCCAAAAAGAGAAAAGTTGGCCTTTTTGAGTTTGATTTATTTGATATAGCTATGATAAACAAAAGAATAAAGCTTTATTAGTTTGATTTAGTAATTAGACAAAGTATAAAAGAACAAATGAACCATAAATTGACTTGGATGGCTTGGGGTTATGAACTACTCCCTCCATCCACTATTGTTTTTCATGTATACTAAAAATAGTTGTCCAAAACTTGATTGTCACTTAAAACAATCAAGAAACAATTGGTCTTTTTTTTCTTTTCAATTCTGCCCTTAATAATTACATAACTACTTATTTCAAAAAGTAACCATTTAAAAGTTACAAGACTACTTTAATGTGAAAGAAAAGTTGTTTTTACAATTTTCAAAAAGTACAAACCATTTTAATAATGATTGATAATAGGGTTATATTAGTCAAATTGCACCTTATATTAAATTTTTCTTTAAGGGTTGTGCATGATCTTATCCTTACAAACAATAGTGGACGGAGGGAGTATTGTTTAGTCTAAATTAGTTGGCTCATCGTCAACCGAGAAACTATTGAGTGGGTTGTGATCCAGCCCGTATATCATGTTGACCCAAATATAGTCCAACCCGCTCATTTGACACCCGTACAATCAAGATTTCCGTCAAGCTCTTGGTTTATGTCGAGATAGTAATATTCGTTTGTATGTTGATACCAGGGAGGGATGTTTCTGTTTAAAGGGAAGCAGTTGTTGTATGCATGGAAGGATGAAGGGACCGGTGACCATGCTCCTATGGAAGATATCTTTGATATTTGCTGCAAAGTTCCTGTTGCATAAATGCCTTCAATCTGTGTTTCATCTCTATTCGAATTTCCAAGGGAAGTGGATGCATATAT</genome_strand>
        <mrna_strand>CCAATTATGGAATCTCTCCAGCAGAGTAGCCTAACATTTGCTACAAAATTTCCTTCTTTTTGTTCCTTCTCTCCCACTCCCAACACCTTCAAGTTTCTTCACCCTTTCCCTTCCTCTGCTATTCCTCTCACCGCCACTACACCAAAACGAATTTCTAGTTTTGTGCCTAAAGCTGCTGCTTCCACCGCTGCCTTTGCTCAAGACATTGGTGATGTACTAGCAGATGTTTCAATTTTCACTGCTACTGGTCAGTCCGTCAAGTTTGAGGACCTTTGGGATCAAAATGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGTAGCTGTTGTTGCACTTCTGAGGCATTTTGGCTGTCCTTGCTG........................................................................................................CTGGGAACTTGCTAAAGCACTCAAAGAGACAAAGGAGAGATTTGATTCTGCTGGTGTAAAGCTAATTGCAGTTGGTATTGGTGCTCCTAACAAAGCACGTATTCTTGCTGAAAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACCATTTCCATTGGATTGCTTGTATGCTGATCCAGACCGCAAG..............................................................................................GCATACGATGTTCTAGGCCTGTATTATGGTGTTGGCCGCACATTTTTCAACCCAGCTAGT..........................................................................................GCTAAAGTGCTCTCTAGATTCAATGAACTGCGGGAAGCTACGAAGAACTACACCATTGAAGCAACCCCTGATGACAGAAGTGGTGTCTTGCAGCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGGATGTTTCTGTTTAAAGGGAAGCAGTTGTTGTATGCATGGAAGGATGAAGGGACCGGTGACCATGCTCCTATGGAAGATATCTTTGATATTTGCTGCAAAGTTCCTGTTGCATAAATGCCTTCAATCTGTGTTTCATCTCTATTCGAA-TTCCAAGGGAAATGGATGCATATAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E730389" ref_strand="+" ref_description="SGN-E730389 [LA23DH10]">
      <seq>cctagtttcttcaccctttcccttcctctgctattcctctcaccgccactacaccaaaacgaatttctagttttgtgcctaaagctgctgcttccaccgctgcctttgctcaagacattggtgatgtactagcagatgtttcaattttcactgctactggtcagtccgtcaagtttgaggacctttgggatcaaaatgagggagtagctgttgttgcacttctgaggcattttggctgtccttgctgctgggaacttgctaaagcactcaaagagacaaaggagagatttgattctgctggtgtaaagctaattgcagttggtattggtgctcctaacaaagcacgtattcttgctgaaaggttaccatttccattggattgcttgtatgctgatccagaccgcaaggcatacgatgttctaggcctgtattatggtgttggccgcacatttttcaacccagctagtgctaaagtgctctctagattcaatgaactgcgggaagctacgaagaactacaccattgaagcaacccctgatgacagaagtggtgtcttgcagcagggagggatgtttctgtttaaagggaagcagttgttgtatgcatggaaggatgaagggaccggtgaccatgctcctatggaagatatctttgatatttgctgcaaagttcctgttgcataaatgccttcaatctgtgtttcatctctattcgaatttccaagggaagtggatgcatatattggtttagttctctaattgtatatgttgtatgtaattctgaaacttgtaactaagggctcatttggtacgagattaagggataatttttaattttaggatgggttggtataaaatcgtgaaataactttgttccatcacctctagtatatgaggatgggaggtaaatagtccatatcagaaattgaaattgtatgaaattatattatctagtactggaaaatcacaaaggtatgttttggtaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="46227" stop="53639"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46526" g_stop="46725" g_length="200"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="200" r_length="200" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46726" i_stop="48579" i_length="1854">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.917" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="48580" g_stop="48626" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="201" r_stop="247" r_length="47" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="48627" i_stop="48730" i_length="104">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="48731" g_stop="48845" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="248" r_stop="362" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="48846" i_stop="51386" i_length="2541">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.934" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="51387" g_stop="51431" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="363" r_stop="407" r_length="45" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="51432" i_stop="51525" i_length="94">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.937" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="51526" g_stop="51585" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="408" r_stop="467" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="51586" i_stop="51675" i_length="90">
            <donor d_prob="0.571" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="51676" g_stop="51771" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="468" r_stop="563" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="51772" i_stop="52915" i_length="1144">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="52916" g_stop="53338" g_length="423"/>
          <reference_exon_boundary r_type="cDNA" r_start="564" r_stop="985" r_length="422" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="986" polyA_stop="997"/>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-E730389" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>986</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E730389" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46526" e_stop="46725"/>
          <exon e_start="48580" e_stop="48626"/>
          <exon e_start="48731" e_stop="48845"/>
          <exon e_start="51387" e_stop="51431"/>
          <exon e_start="51526" e_stop="51585"/>
          <exon e_start="51676" e_stop="51771"/>
          <exon e_start="52916" e_stop="53338"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAGTTTCTTCACCCTTTCCCTTCCTCTGCTATTCCTCTCACCGCCACTACACCAAAACGAATTTCTAGTTTTGTGCCTAAAGCTGCTGCTTCCACCGCTGCCTTTGCTCAAGACATTGGTGATGTACTAGCAGATGTTTCAATTTTCACTGCTACTGGTCAGTCCGTCAAGTTTGAGGACCTTTGGGATCAAAATGAGGTATTGCTATTTCACAATTCTAACAACTCAATTTCCTATTTTTGGGGATTTTTCTTTTCATCTTCCCAACTATTTGTTTTAATGTGCTGTGCAAATTTCTGGATTGCTAACACCTTGTTTGGATGGTTGTTAACGCAGTACGGTATTGTATTGTTAGTTTAAATACAATGTTTTTAAGTATCTATTTTATCTTTTGATTTAATTTCAAGATTCATTTTACGTAATGATCGAATTTGGTGTGATCCCTTATTTAAAATTATTTTTGTTGGGTTTAGCAAGTGTAAATGGGAAAAGAAAAGAGTGATATGAAAAGTGAGGGAACTATTTTGGAGTGAAAATGAAAATTTTGCAAATGAAAAGTCATTTCTCTTATATCGGCAAAAGAAAGGAAAATTGTTGTCCTTATATAAAGAGGAAACACTTCCTTTACTTCTTAAAGAGCTAAGTTCGGCAAAAATGATGTGATTGAAACAATCTTTGTTAATCAAATAAATTCTATTAAATATTATCTCTTAAATTAATTTAGAACGTTAGTTAATTAACAGAATTAATTCGTGTGATTGAATCAATTTTTGTTAATCAAATAAATTCTGTTAATATTATCTCTTATAAATTAATTTAGATCGTTAGTTAATTAGTTAATTAACGGAATTAATTCGCTGATTACAGTAACATTTCAAAAAGTTATTACTCTTTTCGAAAAGTCGTTATTTCCTAACAGACTCATTTTCCGAAAAAACGGGTCTGAACACATTTTTCTGAACAGACACGTTTCTTGCTAAAAATGACTATAAAAGGAAGTCATTTTTCGTTTTTTCAAACACTGAAATTTTCCTTCTCTGCATATATTTTTCTCTCAAAATCAAAGTGTCGATCGACTGAGTCTGTGTGACTTGTTGTTGTTCTTAAGTTCGCTGAAGTTAAAGAAGTTTGAGGTACCGCTATTTCTTTAACAGGATTAATCCATTTTATCTTGGGAGAAATTAATCCATAACCTCGTGTACAGTGGGATTAAATTTCTTAAGGAGACACGGTAGTTTCTATGGACTCGAATTATTTTGTATTTTTTCTGCTTCATCTTATTTCTGTTTCTGTTTATTTGTTAACCTTATAAATACAGGTTGATAACAATTTTAATAATTATATTTCATCTTTTATACTACCTTTTTCATAGTAGTTCAACCACGTATCCTACTTATCTATTAGGTTTATTGGTTAAATTATGGATGTGTGACATTATGTAATGACGGAGAACAATACAATCTTAAAACAATACAGTATGATACAATATAACATAATATGATACATTATGAAACAATACTTAACAATTACTCGGACAAACTGTAAAGAGAATCCTTTCTTACTATAACAATACAACAAGTGACTAATTAAGTTGTTGAGAGCCTTGATGTCGTAAATTAAATCTAGAAATAAAAACAGTAGGTGGTTCTTCTCATTTGTACTAGCCTAGGTGGTATACCTGGTGCTGGTGGGAGGTGCAAGTATCTCGTGGAATTAGTTGAGGTGTGCTAAAGGTAGGGTGGACACCATGGTCATTAAAAATTAAATAATAATAAAAAGATAACAGTATAACTAGTACATATTTAAGGTATGCCCAGGCTGACTGAAACAATAAAGAAGAAAAAAAATGGAAATTTACTTAATAGGGGCAGGAAAGATTAGAAACTTAAGGCAAACAATTCGGTGGTGCATATATGGTTTAAATGGAAAAATGGGGCTTGATGCCTATGTTATCATGGAGCTACCTATCTCCGTTTCATGAATTTCAAATGGCTGACCGACGTTTTCTGGTAGCATAATTACATTTTGTTATTGGGTCGTTATCTTCACCAGGGAGTAGCTGTTGTTGCACTTCTGAGGCATTTTGGCTGTCCTTGCTGGTAAATTATGACCTCACTTTTTCTATCAAGACTTTTTGTTTTGGTGTTTTATATACAATTTTTGTTTTTGATATTCTTGTTCGATATGCATTGCTGTTTGTTAGCTGGGAACTTGCTAAAGCACTCAAAGAGACAAAGGAGAGATTTGATTCTGCTGGTGTAAAGCTAATTGCAGTTGGTATTGGTGCTCCTAACAAAGCACGTATTCTTGCTGAAAGGGTATCTTCATTTCACCTTGGCTGTTACTTCGAATGATTTAGTTCTTTGACATATTATTTCTAATGTTTCAAATAAGCTAGTTAAGGTCATACATGTCATATCAAACTTCTGGCTCAATTGACTCCATGAACTTAAGGTTCCTTCAGAAACATATTTAAATTCAAAGTTGAAGTTTTTGTTTGAATTGTTTCGTTCAAATATGAAATCCATGAGTGGAAGTTGAATATTTGTGAAAACTTACTCGAAATATGCCTTCAACTTGAAAAAATTTATTCAAGTTTAAGTTACAATTGCGTTCTCAGTTTCATGAATTAAAGTTGACATGCAAGCTTAAATCTCTTTATTTGCAAGTCAAGTCCACAAACAAACACCACATAATTGATTCAAGAAATGTCAAAATGTGGTTTCTGCAAGAAAATAGTGTCACTTGCCTCAACTATTGACTGACCTTAGTTTGGAAGCAATAGAACTATATGTCGTCGGTTGAAATTTGATACTGTTTGTCCGAATTTGCCTCTATTCTGATTTGGAAGAAGTTTGCTTGATTTTGCTACTTAAATATAGAGTTAGTATGTCCTAAACAGAGAACCAATATGGACTTATGCATGGTATATCTACAACAAAGGCTATATTTCTGCTAAGAAGATTGATCAAAATTTATCAAGAAAGATCTAAACATGGTGTCATCGAGAGAAAACATATGATAAAGTACCATGAAAGGTCCTCTGGTCCTTTGGTGGGTGATGGAAAAGAAAATAGTCCATATTAAATATCTTAAGGCCATAAAGGACATGTATAAAGAAGTTGTTACTAGTGTGAAAATAGTAGGAGATACAAAAAAGAATTCCTATAACATTGAGTCTATAACAGAGATTGATATTGAGTCCCTACTTGTTTACCTAGTTATGAATGAGCTAACCACCAAAATACAAGATGGTTCTATGGGGTGTATTTGCTGACAAAAGTGTTGATTGCTGAAACCAACAGGGATGTCAACCAGAAGCTTGATCAATGGGGAAGCAGTTAGATACGGGTTTTAGGATGAATAGAAGTACGACAGAATACATGCACGACGAGTTTAGTCCGCATGAGAAGAGTGAAGTTGAGATGAGGCTAGATGAGTGGTGCCAAATGCTTAGATATCTAGGCTTGTCGTTTCAGGAGACTGGAATGGCAGATGAGCGTTACTCATAGAATGTTAGATGGTTGAAAAGGAAAACTACTGAGCCAAGAGTCTTTCGAAAACAGCTCAGTAAGGGTAAGGTTTGGGTACACTCTATCTTCCTAGACCCCACTTGTGAATTACATTGGATATGTTGGTGTTGTTGTTGAAAAGGAAAACTACCACTAAGGTTTTATGTAATCAGAGGATGTCTACAAAAGTGAAAGGTAAGTTCTAAAGGACAATTATACCAATAATGTTATATATATGGTAGTGAATGTTGGATTACTAAAATCCAACATATTCACAAGATGAGTGTTCCAGAGATGTGACCGCTAAGATGGATATGTGGTCATACAAGATCAGAAAAGATTAAAAATGAGCATATTAGGCAAAAGGTGCAAGTAACACGAGTTGAGGATAAAATGAGAGAAGATCGCTTGAGATGGTTTGGTCATGTCTTTAATCGACCTACCTACGTATGCATCATTCTGTAGATGTGAAACTATGGTGATGGAAGGTGTTAAAAGGGAACTAGGTAGACCTAAAATCACGGGGAAAGAAGTTGTCTCGAAAGAGCTATAATTTCTTGGAACCAATGCAAACTTAGCTAAGAATATGACGACAATGGAAGAAAAAAATCTATATAGGTGATATTTACTTGTTGCAAATGAGTTTTTGGTCATATTAGTATGTGGATTTTGAACCTATTGTTTATCTAGGAGTATTATAACCTCATCGCAGATTTTACCTATAAAAATATCAAGAACTTTGTATGTTAAGGTGCATACAAGCTGGCCCCAACACCACGGATAACAAAGAGCACTGCTGTTGTTGTTGCTGCTAATGTGGACTTATATTCTCTGTTAATATGTTTTGCCTCTATAAGTGACATCTGGTGTGGTAAGGATGCATTTATTTTGAACTCCAATACTCCAGAAGCTGCCTAGCTCCATCTTATGCACGGCAGATCTAGCCTTTTTTATAAGCTAAAGCTGCAGTACTGATTCATTAAAATAGTTCCGATTTTGGAATCAAAGAACATAATAATAGAGTATTTTGAATTGCTTCCTTAATTTGTATTTCATAAAGTTCGATGCCAACTAATTGGGAGTAAACTTAGTGATTTTGGTACACTTATATTAGGCTGGTGTTGTAGACATACATTAGTTGGATTAAATTTGTCTTAAGAGACCAACTCGTTGACAACGGAAGGAAACTGTTTTAAAAGGTGGAATGAAAATTGAGGATTCTTCCAAAGTTATTTAGTACCGTGGCATGCTTCTTAATTGAAACTGTGAATCATCATGCTGTCAACAACTTGATTATATATTTGAAGGATCCTGAGCTGATTCTTTTTGCTTCATATTTATGGCCAGTTACCATTTCCATTGGATTGCTTGTATGCTGATCCAGACCGCAAGGTTAGTATCTGCCTATCTCCACAACTATGTGACTGCTTCATTTTGCCTTTCACGATTTTTTCTTGGAGATTTTGACACTTTCCTTGTATCTCAGGCATACGATGTTCTAGGCCTGTATTATGGTGTTGGCCGCACATTTTTCAACCCAGCTAGTGTAATGATCTCAAGGAGTTTCCCTTCATAAAAATGATCATTCTGCTCCATGAGAATGACTTGATCTTTAACTAATTTTTTCCCTTGTCAGGCTAAAGTGCTCTCTAGATTCAATGAACTGCGGGAAGCTACGAAGAACTACACCATTGAAGCAACCCCTGATGACAGAAGTGGTGTCTTGCAGCAGGTTTAAGCTCTTTCTTCTACTGCTGCATTGTTATTCATGAATTAGGGGTGTCATGTTTAGCCCATAAAAATATAACCTGTCCAACACATCCAGACTTGAGCGGGTTAGTCTGGGTATATATTAGTTGGCATAACCCAAGTTAAACTCATTTAAAATCTTAGGACAATTTGTACTTCATATGTAGCCAAAGTTAGCTCATGTAAAAGATTGGTTCAATTTACGCTTGTATATGAAGCCCAAATTGACCCATACAAAAGCTTATCGAACATAGAAAAGTAAGCATGCACCCAAGGGTGTGGCCTAGTGGCCAATAAAGTAGTTAAGAGCATTGAAGTCTCAGGTTCAAATCTCAGATGGAGACAAAAAACACTAGGAGAATTCTTCCCATTTGTTCTAGCCCTGATCGACATAGTTACCTGGTACCTGCTGTTGCGCAAAAGCTGGCCCGGACACCACGGTTATCCAAAAAGAGAAAAGTTGGCCTTTTTGAGTTTGATTTATTTGATATAGCTATGATAAACAAAAGAATAAAGCTTTATTAGTTTGATTTAGTAATTAGACAAAGTATAAAAGAACAAATGAACCATAAATTGACTTGGATGGCTTGGGGTTATGAACTACTCCCTCCATCCACTATTGTTTTTCATGTATACTAAAAATAGTTGTCCAAAACTTGATTGTCACTTAAAACAATCAAGAAACAATTGGTCTTTTTTTTCTTTTCAATTCTGCCCTTAATAATTACATAACTACTTATTTCAAAAAGTAACCATTTAAAAGTTACAAGACTACTTTAATGTGAAAGAAAAGTTGTTTTTACAATTTTCAAAAAGTACAAACCATTTTAATAATGATTGATAATAGGGTTATATTAGTCAAATTGCACCTTATATTAAATTTTTCTTTAAGGGTTGTGCATGATCTTATCCTTACAAACAATAGTGGACGGAGGGAGTATTGTTTAGTCTAAATTAGTTGGCTCATCGTCAACCGAGAAACTATTGAGTGGGTTGTGATCCAGCCCGTATATCATGTTGACCCAAATATAGTCCAACCCGCTCATTTGACACCCGTACAATCAAGATTTCCGTCAAGCTCTTGGTTTATGTCGAGATAGTAATATTCGTTTGTATGTTGATACCAGGGAGGGATGTTTCTGTTTAAAGGGAAGCAGTTGTTGTATGCATGGAAGGATGAAGGGACCGGTGACCATGCTCCTATGGAAGATATCTTTGATATTTGCTGCAAAGTTCCTGTTGCATAAATGCCTTCAATCTGTGTTTCATCTCTATTCGAATTTCCAAGGGAAGTGGATGCATATATTGGTTTAGTTCTCTAATTGTATATGTTGTATGTAATTCTGAAACTTGTAACTAAGGGCTCATTTGGTACGAGATTAAGGGATAATTTTTAATTTTAGGATGGGTTGGTATAAAATCGTGAAATAACTTTGTTCCATCACCTCTAGTATATGAGGATGGGAGGTAAATAGTCCATATCAGAATTTGAAATTGTATGAAATTATATTATCTAGTACTGGAAAATCACAAAGGTTATGTTTTGGTAA</genome_strand>
        <mrna_strand>CCTAGTTTCTTCACCCTTTCCCTTCCTCTGCTATTCCTCTCACCGCCACTACACCAAAACGAATTTCTAGTTTTGTGCCTAAAGCTGCTGCTTCCACCGCTGCCTTTGCTCAAGACATTGGTGATGTACTAGCAGATGTTTCAATTTTCACTGCTACTGGTCAGTCCGTCAAGTTTGAGGACCTTTGGGATCAAAATGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGTAGCTGTTGTTGCACTTCTGAGGCATTTTGGCTGTCCTTGCTG........................................................................................................CTGGGAACTTGCTAAAGCACTCAAAGAGACAAAGGAGAGATTTGATTCTGCTGGTGTAAAGCTAATTGCAGTTGGTATTGGTGCTCCTAACAAAGCACGTATTCTTGCTGAAAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACCATTTCCATTGGATTGCTTGTATGCTGATCCAGACCGCAAG..............................................................................................GCATACGATGTTCTAGGCCTGTATTATGGTGTTGGCCGCACATTTTTCAACCCAGCTAGT..........................................................................................GCTAAAGTGCTCTCTAGATTCAATGAACTGCGGGAAGCTACGAAGAACTACACCATTGAAGCAACCCCTGATGACAGAAGTGGTGTCTTGCAGCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGGATGTTTCTGTTTAAAGGGAAGCAGTTGTTGTATGCATGGAAGGATGAAGGGACCGGTGACCATGCTCCTATGGAAGATATCTTTGATATTTGCTGCAAAGTTCCTGTTGCATAAATGCCTTCAATCTGTGTTTCATCTCTATTCGAATTTCCAAGGGAAGTGGATGCATATATTGGTTTAGTTCTCTAATTGTATATGTTGTATGTAATTCTGAAACTTGTAACTAAGGGCTCATTTGGTACGAGATTAAGGGATAATTTTTAATTTTAGGATGGGTTGGTATAAAATCGTGAAATAACTTTGTTCCATCACCTCTAGTATATGAGGATGGGAGGTAAATAGTCCATATCAGAAATTGAAATTGTATGAAATTATATTATCTAGTACTGGAAAATCACAAAGG-TATGTTTTGGTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E694929" ref_strand="+" ref_description="SGN-E694929 [LH_Ea05D07](-)">
      <seq>attcaatgaactgcgggaaggtacgaagaacttcaccattgaagcaacccctgatgacagaagtggtgtcttgcagcagggagggatgtttctgtttaaagggaagcagttgttgtatgcatggaaggatgaagggaccggtgaccatgctcctatggaagatatctttgatatttgctgcaaagttcctgttgcataaatgccttcaatctgtgtttcatctttattcgaatttccaagggaagtggatgcatatattggtgtagttctctaattgtatattttgtatgtaattttgaaacttgtaactaagggctcatttggtacaagcattaagggataatttttaattttaggatgggttggggataaaatcaataacttgtgccatcacctctagtatatgaggatgagaggtaaatagtccatatcaaaattttaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="51393" stop="53583"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="51693" g_stop="51771" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="79" r_length="79" r_score="0.975"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="51772" i_stop="52915" i_length="1144">
            <donor d_prob="0.991" d_score="0.98"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52916" g_stop="53283" g_length="368"/>
          <reference_exon_boundary r_type="cDNA" r_start="80" r_stop="444" r_length="365" r_score="0.948"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-E694929" ref_strand="+">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>447</cumulative_length_of_scored_exons>
        <coverage percentage="1.007" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E694929" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="51693" e_stop="51771"/>
          <exon e_start="52916" e_stop="53283"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTCAATGAACTGCGGGAAGCTACGAAGAACTACACCATTGAAGCAACCCCTGATGACAGAAGTGGTGTCTTGCAGCAGGTTTAAGCTCTTTCTTCTACTGCTGCATTGTTATTCATGAATTAGGGGTGTCATGTTTAGCCCATAAAAATATAACCTGTCCAACACATCCAGACTTGAGCGGGTTAGTCTGGGTATATATTAGTTGGCATAACCCAAGTTAAACTCATTTAAAATCTTAGGACAATTTGTACTTCATATGTAGCCAAAGTTAGCTCATGTAAAAGATTGGTTCAATTTACGCTTGTATATGAAGCCCAAATTGACCCATACAAAAGCTTATCGAACATAGAAAAGTAAGCATGCACCCAAGGGTGTGGCCTAGTGGCCAATAAAGTAGTTAAGAGCATTGAAGTCTCAGGTTCAAATCTCAGATGGAGACAAAAAACACTAGGAGAATTCTTCCCATTTGTTCTAGCCCTGATCGACATAGTTACCTGGTACCTGCTGTTGCGCAAAAGCTGGCCCGGACACCACGGTTATCCAAAAAGAGAAAAGTTGGCCTTTTTGAGTTTGATTTATTTGATATAGCTATGATAAACAAAAGAATAAAGCTTTATTAGTTTGATTTAGTAATTAGACAAAGTATAAAAGAACAAATGAACCATAAATTGACTTGGATGGCTTGGGGTTATGAACTACTCCCTCCATCCACTATTGTTTTTCATGTATACTAAAAATAGTTGTCCAAAACTTGATTGTCACTTAAAACAATCAAGAAACAATTGGTCTTTTTTTTCTTTTCAATTCTGCCCTTAATAATTACATAACTACTTATTTCAAAAAGTAACCATTTAAAAGTTACAAGACTACTTTAATGTGAAAGAAAAGTTGTTTTTACAATTTTCAAAAAGTACAAACCATTTTAATAATGATTGATAATAGGGTTATATTAGTCAAATTGCACCTTATATTAAATTTTTCTTTAAGGGTTGTGCATGATCTTATCCTTACAAACAATAGTGGACGGAGGGAGTATTGTTTAGTCTAAATTAGTTGGCTCATCGTCAACCGAGAAACTATTGAGTGGGTTGTGATCCAGCCCGTATATCATGTTGACCCAAATATAGTCCAACCCGCTCATTTGACACCCGTACAATCAAGATTTCCGTCAAGCTCTTGGTTTATGTCGAGATAGTAATATTCGTTTGTATGTTGATACCAGGGAGGGATGTTTCTGTTTAAAGGGAAGCAGTTGTTGTATGCATGGAAGGATGAAGGGACCGGTGACCATGCTCCTATGGAAGATATCTTTGATATTTGCTGCAAAGTTCCTGTTGCATAAATGCCTTCAATCTGTGTTTCATCTCTATTCGAATTTCCAAGGGAAGTGGATGCATATATTGGTTTAGTTCTCTAATTGTATATGTTGTATGTAATTCTGAAACTTGTAACTAAGGGCTCATTTGGTACGAG-ATTAAGGGATAATTTTTAATTTTAGGATGGGTT-GGTATAAAATCGTGAAATAACTTTGTTCCATCACCTCTAGTATATGAGGATGGGAGGTAAATAGTCCATATCAGAATTTGAAAT</genome_strand>
        <mrna_strand>ATTCAATGAACTGCGGGAAGGTACGAAGAACTTCACCATTGAAGCAACCCCTGATGACAGAAGTGGTGTCTTGCAGCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGGATGTTTCTGTTTAAAGGGAAGCAGTTGTTGTATGCATGGAAGGATGAAGGGACCGGTGACCATGCTCCTATGGAAGATATCTTTGATATTTGCTGCAAAGTTCCTGTTGCATAAATGCCTTCAATCTGTGTTTCATCTTTATTCGAATTTCCAAGGGAAGTGGATGCATATATTGGTGTAGTTCTCTAATTGTATATTTTGTATGTAATTTTGAAACTTGTAACTAAGGGCTCATTTGGTACAAGCATTAAGGGATAATTTTTAATTTTAGGATGGGTTGGGGATAAAATC----AATAAC-TTGTGCCATCACCTCTAGTATATGAGGATGAGAGGTAAATAGTCCATATCAAAATTTTAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E352180" ref_strand="+" ref_description="SGN-E352180 [cTOS-13-I20]">
      <seq>cccttgaagaccggaggtttcaatttcaagaacttactgaaaagttcatgctgatcatttgtcattataggcccagtagtcaaacgtggaaatgtacctatgtgcaatggaacatccatgcggggagccatagtagccgcatgttgtacttctgaaaccggaggtgttggcgcagaaaacactggaggtgcttgaccttgatcagataaaccgctaagataagccagaacctgattgatcatctctggggtaggttggggtggcatttcctcattttgcacttgttcagtttccccatcctccccttctcttattacttcctcagtcggtggaggagtcaccgccctagtaccagatgggctcggttctcgttctcttcctctagatgacgtcctcccacgacctctaccacggccccttgccgctgttctcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="68939" stop="67907"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68639" g_stop="68207" g_length="433"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="433" r_length="433" r_score="0.915"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-E352180" ref_strand="+">
        <total_alignment_score>0.915</total_alignment_score>
        <cumulative_length_of_scored_exons>433</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E352180" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68639" e_stop="68207"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCTTGAAGACTGAAGGTTTCAATTTCAAGAACTTACTGAAAATTTCATGCTGATCATTTGTCATTACAGGCCCTGTAGTCAGACGAGGAAATGTGCCTATTTCCAATGAGGCATCCATGCGGGGAGCCATAGTGGCTGCATGTTGTACCTCTGAAACCGGAGGTGTTGGTGCAGAAAACACTGGAGGTGCCTGACCTTGATCAGACAACCCACTAAGATAAGCGAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCAATCCCTCATTCTGCACTTGTTCATTTTCCCCATCCTCCCCTTCTCTTATTACTTCTTCAGTCGGTGGAGGAGTCACCGCCCCAGTATCAGATGGGCTAGGTGCTCGTCCTCTTCCTCTAGAGAACGTCCTCCCACGACCTCTACCACGGCCTCTTGCCGCTGCTCTTC</genome_strand>
        <mrna_strand>CCCTTGAAGACCGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTATAGGCCCAGTAGTCAAACGTGGAAATGTACCTATGTGCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACTTCTGAAACCGGAGGTGTTGGCGCAGAAAACACTGGAGGTGCTTGACCTTGATCAGATAAACCGCTAAGATAAGCCAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCATTTCCTCATTTTGCACTTGTTCAGTTTCCCCATCCTCCCCTTCTCTTATTACTTCCTCAGTCGGTGGAGGAGTCACCGCCCTAGTACCAGATGGGCTCGGTTCTCGTTCTCTTCCTCTAGATGACGTCCTCCCACGACCTCTACCACGGCCCCTTGCCGCTGTTCTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E329287" ref_strand="+" ref_description="SGN-E329287 [cTOD-2-K13]">
      <seq>acctagcccatctggtactaaggcggtgacacctccaccaactgaggaagtggtaagagagggtgaggatggggagaatgaacaagtgcagaatgaggaattgccaccccaacctacccaagagatgatcaatcaggttcttgcttaccttagcgggttatctgatcaaggccaagcacctccagtgttttctgcactagcacctcaggctccggaggtacaacatgcgcctactgtgactccccgcatcgatacctcattggaaataggaacgtttccccgtctgactacagggcctataatgacaaatgatcagcatgaactttttagtaagttcttgaaattgaaacctcaagtctacaagggtgttgaatctgaggatgcctacgattttctggttgactgtcatgagctactacacaagatgggtatagtagaacggtttggtgttgagtttgtgacttatcagtttcaagggaacgccaaaatgtggtggcggtcacatgttgagtgtcaaccaacagaggcaccacgtatgacttgggcatcattct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="67974" stop="69127"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68274" g_stop="68827" g_length="554"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="554" r_length="554" r_score="0.912"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-E329287" ref_strand="+">
        <total_alignment_score>0.912</total_alignment_score>
        <cumulative_length_of_scored_exons>554</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E329287" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68274" e_stop="68827"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCTAGCCCATCTGATACTGGGGCGGTGACTCCTCCACCGACTGAAGAAGTAATAAGAGAAGGGGAGGATGGGGAAAATGAACAAGTGCAGAATGAGGGATTGCCACCCCAACCTACCCCAGAGATGATCAATCAGGTTCTCGCTTATCTTAGTGGGTTGTCTGATCAAGGTCAGGCACCTCCAGTGTTTTCTGCACCAACACCTCCGGTTTCAGAGGTACAACATGCAGCCACTATGGCTCCCCGCATGGATGCCTCATTGGAAATAGGCACATTTCCTCGTCTGACTACAGGGCCTGTAATGACAAATGATCAGCATGAAATTTTCAGTAAGTTCTTGAAATTGAAACCTTCAGTCTTCAAGGGTGCTGAGTCTGAGGATGCTTACGATTTTCTGGTTGACTGTCATGAGCTACTACACAAGATGGGTATAGTAGAACGGTTTGGTGTTGAGTTCGTGAGTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATGTTGAGTGTCAACCAATAGAGGCACCACCTATGACTTGGGCCTCATTCT</genome_strand>
        <mrna_strand>ACCTAGCCCATCTGGTACTAAGGCGGTGACACCTCCACCAACTGAGGAAGTGGTAAGAGAGGGTGAGGATGGGGAGAATGAACAAGTGCAGAATGAGGAATTGCCACCCCAACCTACCCAAGAGATGATCAATCAGGTTCTTGCTTACCTTAGCGGGTTATCTGATCAAGGCCAAGCACCTCCAGTGTTTTCTGCACTAGCACCTCAGGCTCCGGAGGTACAACATGCGCCTACTGTGACTCCCCGCATCGATACCTCATTGGAAATAGGAACGTTTCCCCGTCTGACTACAGGGCCTATAATGACAAATGATCAGCATGAACTTTTTAGTAAGTTCTTGAAATTGAAACCTCAAGTCTACAAGGGTGTTGAATCTGAGGATGCCTACGATTTTCTGGTTGACTGTCATGAGCTACTACACAAGATGGGTATAGTAGAACGGTTTGGTGTTGAGTTTGTGACTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATGTTGAGTGTCAACCAACAGAGGCACCACGTATGACTTGGGCATCATTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E356614" ref_strand="+" ref_description="SGN-E356614 [cTOS-21-N3]">
      <seq>gcgaatccgctcttgaggactgaaacagagttgagtggcatatctggatagtgcacgaaacttagcctcataagcattaactgacaccctaccttgctctaggctcaagaactcatcccttttcttatccctcaaagtccgggggatatacttctccataaacaaactatagaatgaggcccaagtcataggtgatgcctctattggttgacactcgatatgtgaccgccaccacatttgggcgttcccttgaaactgataagtcacaaactccacaccaaaccgttctactatacccatcttgtgtagtagctcgtgacagtcaaccagaaaatcataagcatcctccgattcagcacccttgaagaccggaggtttcaatttcaagaacttactgaaaagttcatgctgatcatttgtcattatagggacagtagtcaaacgtggaaatgtgcctatgtccaatggaacatccatgcggggagccatagtagccgcatgttgtacttctgaaaccggaggtgttggcgcagaaaacactggaggtgcttgaccttgatcagataacccgctaagataagccagaacctgattgatcatctctggggtaggttggggtggcatttcctcattttgcacttgntcagtttccccatccctccctttctctattacttcctcagtcagtggaagagtcactgccctagtatcagatgggct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="69296" stop="67978"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68997" g_stop="68278" g_length="720"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="720" r_length="720" r_score="0.919"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-E356614" ref_strand="+">
        <total_alignment_score>0.919</total_alignment_score>
        <cumulative_length_of_scored_exons>720</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E356614" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68997" e_stop="68278"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACGAATCCGCTCTTGTGGACTGAAACAAAGTTGGGTGGCATACCTTGATAGTGCACGAAACTTAGCCTCATATGCATTGACCGACATCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCCTATCCCTCAAAGTCCGGGGGATATACTTCTCCATAAACAAACTAGAGAATGAGGCCCAAGTCATAGGTGGTGCCTCTATTGGTTGACACTCAACATGTGACCGCCACCACATTTTGGCGTTCCCTTGAAACTGATAACTCACGAACTCAACACCAAACCGTTCTACTATACCCATCTTGTGTAGTAGCTCATGACAGTCAACCAGAAAATCGTAAGCATCCTCAGACTCAGCACCCTTGAAGACTGAAGGTTTCAATTTCAAGAACTTACTGAAAATTTCATGCTGATCATTTGTCATTACAGGCCCTGTAGTCAGACGAGGAAATGTGCCTATTTCCAATGAGGCATCCATGCGGGGAGCCATAGTGGCTGCATGTTGTACCTCTGAAACCGGAGGTGTTGGTGCAGAAAACACTGGAGGTGCCTGACCTTGATCAGACAACCCACTAAGATAAGCGAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCAATCCCTCATTCTGCACTTGTTCATTTTCCCCAT-CCTCCCCTTCTCTTATTACTTCTTCAGTCGGTGGAGGAGTCACCGCCCCAGTATCAGATGGGCT</genome_strand>
        <mrna_strand>GCGAATCCGCTCTTGAGGACTGAAACAGAGTTGAGTGGCATATCTGGATAGTGCACGAAACTTAGCCTCATAAGCATTAACTGACACCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCTTATCCCTCAAAGTCCGGGGGATATACTTCTCCATAAACAAACTATAGAATGAGGCCCAAGTCATAGGTGATGCCTCTATTGGTTGACACTCGATATGTGACCGCCACCACATTTGGGCGTTCCCTTGAAACTGATAAGTCACAAACTCCACACCAAACCGTTCTACTATACCCATCTTGTGTAGTAGCTCGTGACAGTCAACCAGAAAATCATAAGCATCCTCCGATTCAGCACCCTTGAAGACCGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTATAGGGACAGTAGTCAAACGTGGAAATGTGCCTATGTCCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACTTCTGAAACCGGAGGTGTTGGCGCAGAAAACACTGGAGGTGCTTGACCTTGATCAGATAACCCGCTAAGATAAGCCAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCATTTCCTCATTTTGCACTTGNTCAGTTTCCCCATCCCTCCCTTTCTC-TATTACTTCCTCAGTCAGTGGAAGAGTCACTGCCCTAGTATCAGATGGGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E352401" ref_strand="+" ref_description="SGN-E352401 [cTOS-9-N1]">
      <seq>aatccgctcttgaggactgaaacagagttgagtggcatatctggatagtgcacgaaacttagcctcataagcattaactgacaccctaccttgctctaggctcaagaactcatcccttttcttatccctcaaagtccgggggatatacttctccataaacaaactatagaatgaggcccaagtcataggtgatgcctctattggttgacactcgatatgtgaccgccaccacatttgggcgttcccttgaaactgataagtcacaaactccacaccaaaccgttctactatacccatcttgtgtagtagctcgtgacagtcaaccagaaaatcataagcatcctccgattcagcacccttgaagaccggaggtttcaatttcaagaacttactgaaaagttcatgctgatcatttgtcattatagggacagtagtcaaacgtggaaatgtgcctatgtccaatggaacatccatgcggggagccatagtagccgcatgttgtacttctgaaaccggaggtgttggcgcagaaaacactggaggtgcttgaccttgatcagataacccgctaagataagccagaacctgattgatcatctctggggtaggttggggtgccatttccctcatttgcacttgttcagtttccccatcctccccttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="69294" stop="68031"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68994" g_stop="68331" g_length="664"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="664" r_length="664" r_score="0.926"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-E352401" ref_strand="+">
        <total_alignment_score>0.926</total_alignment_score>
        <cumulative_length_of_scored_exons>664</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E352401" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68994" e_stop="68331"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATCCGCTCTTGTGGACTGAAACAAAGTTGGGTGGCATACCTTGATAGTGCACGAAACTTAGCCTCATATGCATTGACCGACATCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCCTATCCCTCAAAGTCCGGGGGATATACTTCTCCATAAACAAACTAGAGAATGAGGCCCAAGTCATAGGTGGTGCCTCTATTGGTTGACACTCAACATGTGACCGCCACCACATTTTGGCGTTCCCTTGAAACTGATAACTCACGAACTCAACACCAAACCGTTCTACTATACCCATCTTGTGTAGTAGCTCATGACAGTCAACCAGAAAATCGTAAGCATCCTCAGACTCAGCACCCTTGAAGACTGAAGGTTTCAATTTCAAGAACTTACTGAAAATTTCATGCTGATCATTTGTCATTACAGGCCCTGTAGTCAGACGAGGAAATGTGCCTATTTCCAATGAGGCATCCATGCGGGGAGCCATAGTGGCTGCATGTTGTACCTCTGAAACCGGAGGTGTTGGTGCAGAAAACACTGGAGGTGCCTGACCTTGATCAGACAACCCACTAAGATAAGCGAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCA-ATCCCTCATTCTGCACTTGTTCATTTTCCCCATCCTCCCCTTCT</genome_strand>
        <mrna_strand>AATCCGCTCTTGAGGACTGAAACAGAGTTGAGTGGCATATCTGGATAGTGCACGAAACTTAGCCTCATAAGCATTAACTGACACCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCTTATCCCTCAAAGTCCGGGGGATATACTTCTCCATAAACAAACTATAGAATGAGGCCCAAGTCATAGGTGATGCCTCTATTGGTTGACACTCGATATGTGACCGCCACCACATTTGGGCGTTCCCTTGAAACTGATAAGTCACAAACTCCACACCAAACCGTTCTACTATACCCATCTTGTGTAGTAGCTCGTGACAGTCAACCAGAAAATCATAAGCATCCTCCGATTCAGCACCCTTGAAGACCGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTATAGGGACAGTAGTCAAACGTGGAAATGTGCCTATGTCCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACTTCTGAAACCGGAGGTGTTGGCGCAGAAAACACTGGAGGTGCTTGACCTTGATCAGATAACCCGCTAAGATAAGCCAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGCCATTTCCCTCATT-TGCACTTGTTCAGTTTCCCCATCCTCCCCTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E353359" ref_strand="-" ref_description="SGN-E353359 [cTOS-15-G18]">
      <seq>gcaaggtaggatgtaggtcaatgcatatgaggctaagtttcgtgcactatccagatatgccactcaactttgtttcagtccacaagagaggattcgtcgttttgtgaaagggttgaggtcagagttgcggatttcagcgttacaggtagcggctacggcaaaatccttgcaagaaatggttgacttcgatgtaattctgggtatgacttggctttctccaaattttgcaatcttggattgtaatgctaaaaccgtgacgttagccaagcctgggacagatctgttagtgtaggagggtgactacacttccaatccggtgcgtatcatctcctttcttcgtgctaagaaaatggttagtaaagggtgtttagctttcttggcacatctcaaggataacactacccaagtaccttcgattgactcagtttcagtagttcgtgagtttatggatgtgttccctgcagatcatcctggtatgccaccggatagggatattgacttctgtattgatctcgaaccgggcacacgccccatttttatacccccttatagaatggctcccgcagagttaagagagttaaaggcacaacttcaagagttattgaacaaaggcttcattagaccaagtgcatctccttggggtgctccggttttgttgtaaagatcggcagtttttgaatgtgcatagactaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="68601" stop="86941"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68901" g_stop="69073" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="173" r_length="173" r_score="0.931"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69074" i_stop="69818" i_length="745">
            <donor d_prob="0.000" d_score="0.90"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69819" g_stop="70346" g_length="528"/>
          <reference_exon_boundary r_type="cDNA" r_start="174" r_stop="694" r_length="521" r_score="0.926"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-E353359" ref_strand="-">
        <total_alignment_score>0.927</total_alignment_score>
        <cumulative_length_of_scored_exons>701</cumulative_length_of_scored_exons>
        <coverage percentage="1.010" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E353359" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="68901" e_stop="69073"/>
          <exon e_start="69819" e_stop="70346"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAAGGTAGGATGTCGGTCAATGCATATGAGGCTAAGTTTCGTGCACTATCAAGGTATGCCACCCAACTTTGTTTCAGTCCACAAGAGCGGATTCGTCGTTTTGTGAGGGGGTTGAGGTCAGAGTTGCGGATTTCAGCCTTACAGGTAGCGGCTACAGCGAAATCTTTTCAAGAAGTGGTAGACTTCGTGATAGAGGTGGAAGGAGTGAAGCCAGATGAATTCACCATGGCATCGACATCAAAGAGGTTTCGAAAGGGAGGTGAGTTTAATGGTTCTTACTCGAGAGGACAGGGCTCCGGAGGTTACTCAGTTCGACCCATTCAGTCTTCACTACAAACTGTAGTTGGGGCTCCCCCTCAGACCGGTCAACACTTCTCTGAGAGACCTATGCTCGAATCTAGAGAGTGTTATGGATGTGGGGAGACTGGACACATTAAGAAGTATTGTCCAAAACAGAGTTACAGACCTCCAAATGTTAGAGGTAGAGGTGGTTATGGAAGAGGCCGTTATTCTGGAGGACGTGGTGGTCGAGGTAATGGTGGCCACCAAAACGGTCGGGGTGATGGGCAAGCTGGAGCCACTACATCACAACATGGTAGGGGCAACGGACAGACAGGTGAGAGGGCCCATTGTTACGCTTTCCCCGGGCGGTCAGAAGCGGAAACATCAGATGCTGTTATCACAGGTAATCTTTCGGTTTGTGATTGCATGGATTTTGTATTGTTTGACCCTGGCTCTACATTTTCATATGTATCTTCCGCATTTGCTAATGGTCTTGATTTACATTGTGAATTTGCTTGACATGCCTATTCGTGTTTCTACTCCGGTGGGTGAGTCTGTGATAGTTGAAAAGGTGTATAGGTCTTGTCTTGTAACTTTTATGGGGAGCAATACTCATGTAGAGTTGGTTATCTTAGAAATGGTTGACTTCGATGTAATTCTGGGCATGACTTGGCTTTCTCCAAATTTTGCGATCTTGGATTGTAATGCTAAAACTGTGACGTTAGCCAAGCCTGGGACAGATCCGTTAGTGTGGGAGGGTGACTACACTTCCAATCCGGTTCGTATCATCTCCTTTCTTCGTTCTAAGAAAATGGTTAGTAAAGGGTGTTTAGCTTTCTTGGCACATCTCAAGGATGACACTACCCAAGTACCTTCGATTGAGTCGGTTTCGGTGGTCCGTGAGTTTCTGGATGTGTTCCCTGCAGATCTTCCTGGTATGCCACCAGATAGGGATATTGACTTCTGTATTGACCTTAAACCGGGTACTCGCCCCATTTCTATACCCCCTTATAGAATGGCTCCTGCGGAGTTAAGAGAGTTAAAAGCCCAACTTCAAGAGTTGTTGAACAAAGGCTTCATTAGACCAAGTGCATCTCCTTGGGGTGCTCCGATTTTGTTTGTGAAGAAGAAGGATGGGAGTTTTCGAATGTGCATAGACTACA</genome_strand>
        <mrna_strand>GCAAGGTAGGATGTAGGTCAATGCATATGAGGCTAAGTTTCGTGCACTATCCAGATATGCCACTCAACTTTGTTTCAGTCCACAAGAGAGGATTCGTCGTTTTGTGAAAGGGTTGAGGTCAGAGTTGCGGATTTCAGCGTTACAGGTAGCGGCTACGGCAAAATCCTTGCAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGGTTGACTTCGATGTAATTCTGGGTATGACTTGGCTTTCTCCAAATTTTGCAATCTTGGATTGTAATGCTAAAACCGTGACGTTAGCCAAGCCTGGGACAGATCTGTTAGTGTAGGAGGGTGACTACACTTCCAATCCGGTGCGTATCATCTCCTTTCTTCGTGCTAAGAAAATGGTTAGTAAAGGGTGTTTAGCTTTCTTGGCACATCTCAAGGATAACACTACCCAAGTACCTTCGATTGACTCAGTTTCAGTAGTTCGTGAGTTTATGGATGTGTTCCCTGCAGATCATCCTGGTATGCCACCGGATAGGGATATTGACTTCTGTATTGATCTCGAACCGGGCACACGCCCCATTTTTATACCCCCTTATAGAATGGCTCCCGCAGAGTTAAGAGAGTTAAAGGCACAACTTCAAGAGTTATTGAACAAAGGCTTCATTAGACCAAGTGCATCTCCTTGGGGTGCTCCGGTTTTG-TTGT--A-AAG-A--TCGGCAGTTTTTGAATGTGCATAGACTACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E355244" ref_strand="+" ref_description="SGN-E355244 [cTOS-18-K20]">
      <seq>cggaaactcccatccttcttcttcacaaacaaaatcggagcaccccaaggagatgcacttggtctaatgaaacctttgctcaacaactcttgaagttgggcctttaactctcttaactctacgggagccattctataagggggtatagaaatggggcgtgtgcccggttcaagatcgatacagaagtcaatatccctatctggtggcataccaggaagatctgcagggaacacatccaaaaactcacagactataaaaaccgactcaatcgaaggtacttgggtagtgtcatccttgagatgtgccaagaaagctaaacaccctttactaaccattttcttagcacgaagaaaggagatgatgcacaccggattggaagtgtagtcaccctcccacactaacggatctgtcccaggcttggctaatgtcaccgttttagcattacaatccaagatcgcaaattgcggagaaagccaagtcatacccagaattacatcaaaatcaaccatttctaagataaccaaatctacataagtgttgctccccacaaagttcaccaaacaagacctatataccttttcaactaccacagactcacccaccggagtagaaacacgaataggcatatcaagtaattcacaatgtaaatttagaccgttagcaaatgaggaagatacantagaaaacgtggatcccaggatcaacaatacagaagccatgcaatcacaatcgaaagattacctgtgatgacagcatctaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="70629" stop="69267"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70329" g_stop="69567" g_length="763"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="761" r_length="761" r_score="0.915"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-E355244" ref_strand="+">
        <total_alignment_score>0.915</total_alignment_score>
        <cumulative_length_of_scored_exons>763</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E355244" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70329" e_stop="69567"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAAAACTCCCATCCTTCTTCTTCACAAACAAAATCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGCCTTTGTTCAACAACTCTTGAAGTTGGGCTTTTAACTCTCTTAACTCCGCAGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTACCCGGTTTAAGGTCAATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAGAAACTCACGGACCACCGAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGAACGAAGAAAGGAGATGATACGAACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAACGTCACAGTTTTAGCATTACAATCCAAGATCGCAAAATTTGGAGAAAGCCAAGTCATGCCCAGAATTACATCGAAGTCAACCATTTCTAAGATAACCAACTCTACATGAGTATTGCTCCCCATAAAAGTTACAAGACAAGACCTATACACCTTTTCAACTATCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATGTCAAGCAAATTCACAATGTAAATCAAGACCATTAGCAAATGCGGAAGATACATATGAAAATGTAGAGCCAGGGTCAAACAATACAAAATCCATGCAATCACAAACCGAAAGATTACCTGTGATAACAGCATCTGAT</genome_strand>
        <mrna_strand>CGGAAACTCCCATCCTTCTTCTTCACAAACAAAATCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAACCTTTGCTCAACAACTCTTGAAGTTGGGCCTTTAACTCTCTTAACTCTACGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGTGTGCCCGGTTCAAGATCGATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAAAAACTCACAGACTATAAAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATGCACACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAATGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAACCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACAAAGTTCACCAAACAAGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATATCAAG-TAATTCACAATGTAAATTTAGACCGTTAGCAAATGAGGAAGATACANTAGAAAACGTGGATCCCAGGATCAACAATACAGAAGCCATGCAATCAC-AATCGAAAGATTACCTGTGATGACAGCATCTAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E352716" ref_strand="+" ref_description="SGN-E352716 [cTOS-11-H19]">
      <seq>gatctgtcccaggcttggctaacgtcacagttttagcattacaatccaagattgcaaaatttggagaaagccaagtcatacccagaattacatcaaaatcaaccatttctaagataaccaagtctacataagtattgctccccacaaaagtcaccagaccagacctatatactttttcaactatcacagactcacccaccggagtagaaacacgaataggcatgtcaagcaattcataatttaatttaagaccagtagcaaatgaggaagatacatatgaaaatgtggatccagggtcaaataatacaaaagccatgcaatcacaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="70226" stop="69299"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69926" g_stop="69595" g_length="332"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="331" r_length="331" r_score="0.922"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-E352716" ref_strand="+">
        <total_alignment_score>0.922</total_alignment_score>
        <cumulative_length_of_scored_exons>332</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E352716" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69926" e_stop="69595"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATCTGTCCCAGGCTTGGCTAACGTCACAGTTTTAGCATTACAATCCAAGATCGCAAAATTTGGAGAAAGCCAAGTCATGCCCAGAATTACATCGAAGTCAACCATTTCTAAGATAACCAACTCTACATGAGTATTGCTCCCCATAAAAGTTACAAGACAAGACCTATACACCTTTTCAACTATCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATGTCAAGCAAATTCACAATGTAAATCAAGACCATTAGCAAATGCGGAAGATACATATGAAAATGTAGAGCCAGGGTCAAACAATACAAAATCCATGCAATCACAAACCGA</genome_strand>
        <mrna_strand>GATCTGTCCCAGGCTTGGCTAACGTCACAGTTTTAGCATTACAATCCAAGATTGCAAAATTTGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAACCATTTCTAAGATAACCAAGTCTACATAAGTATTGCTCCCCACAAAAGTCACCAGACCAGACCTATATACTTTTTCAACTATCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATGTCAAGC-AATTCATAATTTAATTTAAGACCAGTAGCAAATGAGGAAGATACATATGAAAATGTGGATCCAGGGTCAAATAATACAAAAGCCATGCAATCACAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E351414" ref_strand="+" ref_description="SGN-E351414 [cTOS-12-D7]">
      <seq>cggaaactcccatccttcttcttcacaaacaaaatcggagcaccccaaggagatgcacttggtctaatgaaacctttgctcaacaactcttgaagttgggcctttaactctcttaactctacgggagccattctataagggggtatagaaatggggcgtgtgcccggttcaagatcgatacagaagtcaatatccctatctggtggcataccaggaagatctgcagggaacacatccaaaaactcacagactataaaaaccgactcaatcgaaggtacttgggtagtgtcatccttgagatgtgccaagaaagctaaacaccctttactaaccattttcttagcacgaagaaaggagatgatgcacaccggattggaagtgtagtcaccctcccacactaacggatctgtcccaggcttggctaatgtcaccgttttagcattacaatccaagatcgcaaattgcggagaaagccaagtcatacccagaattacatcaaaatcaaccatttctaagataaccaaatctacataagtgttgctccccacaaagttcaccaaacaagacctatataccttttcaactaccacagactcacccaccggagtagaaacacgaataggcatatcaagtaattcacaatgtaaatttagaccgttag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="70629" stop="69368"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70329" g_stop="69668" g_length="662"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="661" r_length="661" r_score="0.929"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-E351414" ref_strand="+">
        <total_alignment_score>0.929</total_alignment_score>
        <cumulative_length_of_scored_exons>662</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E351414" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70329" e_stop="69668"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAAAACTCCCATCCTTCTTCTTCACAAACAAAATCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGCCTTTGTTCAACAACTCTTGAAGTTGGGCTTTTAACTCTCTTAACTCCGCAGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTACCCGGTTTAAGGTCAATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAGAAACTCACGGACCACCGAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGAACGAAGAAAGGAGATGATACGAACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAACGTCACAGTTTTAGCATTACAATCCAAGATCGCAAAATTTGGAGAAAGCCAAGTCATGCCCAGAATTACATCGAAGTCAACCATTTCTAAGATAACCAACTCTACATGAGTATTGCTCCCCATAAAAGTTACAAGACAAGACCTATACACCTTTTCAACTATCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATGTCAAGCAAATTCACAATGTAAATCAAGACCATTAG</genome_strand>
        <mrna_strand>CGGAAACTCCCATCCTTCTTCTTCACAAACAAAATCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAACCTTTGCTCAACAACTCTTGAAGTTGGGCCTTTAACTCTCTTAACTCTACGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGTGTGCCCGGTTCAAGATCGATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAAAAACTCACAGACTATAAAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATGCACACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAATGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAACCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACAAAGTTCACCAAACAAGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATATCAAG-TAATTCACAATGTAAATTTAGACCGTTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E355232" ref_strand="+" ref_description="SGN-E355232 [cTOS-18-A6]">
      <seq>tcaatgcgaggaagaggatacttgttcttaatagttaccttgttcagttgtctgtagtctatgcacattctaaaacttccatccttcttcttcacaaataaaactggagcaccccaaggagatgcacttggtctaatgaagaccttgctcaacaactcttgaagttgagcctttaactctcttaattcggcgggagccattctataagggggtatagaaatggggcgtgtgcctggttcaagatcgatacagaagtcaatatccctatctggtggcataccaggaagatctgcaggaaacacgtccaaaaactcgcggactaccgaaaccgactcaattgagggtacttgagtagtgtcatccttgagatgtgccaagaaagctgaacaccctttactaaccattttcttagcacgaagaaaggatatgatacgcaccagattggaagtgtagtcaccctcccacactaacggatctgtcccaggcttggctaacgtcaccgttttagcattacaatccaagatcgcaaaatttggagaaagccaagtcatacccagaattacatcaatgtcacccatttctaaaaaaccaaatctacataagtgttgctccccacgaaattcnacaaaacagaactatgtaccttttcaactaccac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="70698" stop="69457"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70398" g_stop="69740" g_length="659"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="658" r_length="658" r_score="0.914"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-E355232" ref_strand="+">
        <total_alignment_score>0.914</total_alignment_score>
        <cumulative_length_of_scored_exons>659</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E355232" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70398" e_stop="69740"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAATGCGAGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTTAGTTGTCTGTAGTCTATGCACATTCGAAAACTCCCATCCTTCTTCTTCACAAACAAAATCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGCCTTTGTTCAACAACTCTTGAAGTTGGGCTTTTAACTCTCTTAACTCCGCAGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTACCCGGTTTAAGGTCAATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAGAAACTCACGGACCACCGAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGAACGAAGAAAGGAGATGATACGAACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAACGTCACAGTTTTAGCATTACAATCCAAGATCGCAAAATTTGGAGAAAGCCAAGTCATGCCCAGAATTACATCGAAGTCAACCATTTCTAAGATAACCAACTCTACATGAGTATTGCTCCCCATAAAAGT-TACAAGACAAGACCTATACACCTTTTCAACTATCAC</genome_strand>
        <mrna_strand>TCAATGCGAGGAAGAGGATACTTGTTCTTAATAGTTACCTTGTTCAGTTGTCTGTAGTCTATGCACATTCTAAAACTTCCATCCTTCTTCTTCACAAATAAAACTGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGACCTTGCTCAACAACTCTTGAAGTTGAGCCTTTAACTCTCTTAATTCGGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGTGTGCCTGGTTCAAGATCGATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGAAACACGTCCAAAAACTCGCGGACTACCGAAACCGACTCAATTGAGGGTACTTGAGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTGAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGATATGATACGCACCAGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACAATCCAAGATCGCAAAATTTGGAGAAAGCCAAGTCATACCCAGAATTACATCAATGTCACCCATTTCTAA-AAAACCAAATCTACATAAGTGTTGCTCCCCACGAAATTCNACAAAAC-AGAACTATGTACCTTTTCAACTACCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E368762" ref_strand="+" ref_description="SGN-E368762 [TUS-22-P2]">
      <seq>gtctcacccaattcttcactgtctcaatcttacaaggatccaccatcactccatccttagaaaccacgtgccccaagaaggacactgcatctatccaaaactcacacttagagaacttggcataaagctttttctccctcaacatttctaatacaattctcaaatgctcctcatgttccttcttactattagagtatatcagtatatcatcaataaacatgatgacaaagagatccaaatatggcttaaaatcccgttcatcaagctcatgaacgcagcaggggcattcgtaagaccaaaagacatcactacaaattcgtaatgcccatacctggttctaaaagcagtctttggcacatccgttgcccgtattttcaattgatgataaccggatctcaagtcaatcttagagaagacacaagcaccttgtaactgatcgaacaagtcatcaatgcgaggaagtggatacttgttcttaatagttaccttgttcaactgccggtagtctatgcacatccgaaaactcccatccttcttcttcacaaaccaaaccggagcaccccaaggagatgcacttggtctaatgaagactttgctcaaaaactcttgaagttgggcctttaactctcttaactccgcgggagccattctataagggggtatagaaatggggcgagtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="71147" stop="69869"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70847" g_stop="70168" g_length="680"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="679" r_length="679" r_score="0.944"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-E368762" ref_strand="+">
        <total_alignment_score>0.944</total_alignment_score>
        <cumulative_length_of_scored_exons>680</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E368762" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70847" e_stop="70168"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACTGCATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCCTCATGTTCCTTCTTGATCTTTGAGTATACCAATATATCATCAATAAATACGATCACAAATAGATCCAGATATAGCTTAAAAATCCCGTTCATCAAACTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATACCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAGAAGACACAAGCTCCTTGTAACTGATCGAACAAGTCATCAATGCGAGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTTAGTTGTCTGTAGTCTATGCACATTCGAAAACTCCCATCCTTCTTCTTCACAAACAAAATCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGCCTTTGTTCAACAACTCTTGAAGTTGGGCTTTTAACTCTCTTAACTCCGCAGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTA</genome_strand>
        <mrna_strand>GTCTCACCCAATTCTTCACTGTCTCAATCTTACAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACTGCATCTATCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCTAATACAATTCTCAAATGCTCCTCATGTTCCTTCTTACTATTAGAGTATATCAGTATATCATCAATAAACATGATGACAAAGAGATCCAAATATGGCTT-AAAATCCCGTTCATCAAGCTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATGCGAGGAAGTGGATACTTGTTCTTAATAGTTACCTTGTTCAACTGCCGGTAGTCTATGCACATCCGAAAACTCCCATCCTTCTTCTTCACAAACCAAACCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGACTTTGCTCAAAAACTCTTGAAGTTGGGCCTTTAACTCTCTTAACTCCGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E379315" ref_strand="+" ref_description="SGN-E379315 [TUS-1-J2]">
      <seq>gaatcccttgacaaatcggcggtagtagctagctaacccaacaaagctccttatttctgacacattagtaggtcttacccaattcttcactgtctcaatcttagaaggatccaccatcactccatccttagaaaccacgttccccaagaaggacactacatctagccaaaactcacacttagagaacttggcataaaactttttctccctcaacatttccaataccattctcaaatgctcttcatgttcctccttacttttagagtatatcagtatatcatcaataaatacgatcacaaagagatccaaatatggcttaaaaatcccttttattaaactcataaacgcagcaggggcattcataagaccaaaagacatcactacaaatttgtaatgcccatacctggttctaaaagcagtctttggcacatccgttgcccgtattttcaattgatgataaccggatctcaagtcaatcttagaaaagacacaagcaccttgtaactgatcgaacaagtcattaatgcgaggaagaggatacttgttctttatggttaccttgttncactgccggtagcctatgcacatccgaaaactccaatccttcttctttacaaacaaaaccggagcaccccaaggagatgcagttggtctaatgaagcctttgctcacaactctttgaagtggtcttttaactctcttaactctgcgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="71218" stop="69906"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70918" g_stop="70206" g_length="713"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="712" r_length="712" r_score="0.937"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-E379315" ref_strand="+">
        <total_alignment_score>0.937</total_alignment_score>
        <cumulative_length_of_scored_exons>713</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E379315" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70918" e_stop="70206"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACTGCATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCCTCATGTTCCTTCTTGATCTTTGAGTATACCAATATATCATCAATAAATACGATCACAAATAGATCCAGATATAGCTTAAAAATCCCGTTCATCAAACTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATACCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAGAAGACACAAGCTCCTTGTAACTGATCGAACAAGTCATCAATGCGAGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTTAGTTGTCTGTAGTCTATGCACATTCGAAAACTCCCATCCTTCTTCTTCACAAACAAAATCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGCCTTTGTTCAACAACTCTTGAAGTTGGGCTTTTAACTCTCTTAACTCCGCAG</genome_strand>
        <mrna_strand>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTTCCCCAAGAAGGACACTACATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAACTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTCCTTACTTTTAGAGTATATCAGTATATCATCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCTTTTATTAAACTCATAAACGCAGCAGGGGCATTCATAAGACCAAAAGACATCACTACAAATTTGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAAAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATTAATGCGAGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTNCACTGCCGGTAGCCTATGCACATCCGAAAACTCCAATCCTTCTTCTTTACAAACAAAACCGGAGCACCCCAAGGAGATGCAGTTGGTCTAATGAAGCCTTTGCTC-ACAACTCTTTGAAGTGGTCTTTTAACTCTCTTAACTCTGCGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E375319" ref_strand="+" ref_description="SGN-E375319 [TUS-15-F18]">
      <seq>gaatcccttgacaaatcggcggtagtagctagctaacccaacaaagctccttatttctgacacattagtaggtcttacccaattcttcactgtctcaatcttagaaggatccaccatcactccatccttagaaaccacgttccccaagaaggacactacatctagccaaaactcacacttagagaacttggcataaaactttttctccctcaacatttccaataccattctcaaatgctcttcatgttcctccttacttttagagtatatcagtatatcatcaataaatacgatcacaaagagatccaaatatggcttaaaaatcccttttattaaactcataaacgcagcaggggcattcataagaccaaaagacatcactacaaatttgtaatgcccatacctggttctaaaagcagtctttggcacatccgttgcccgtattttcaattgatgataaccggatctcaagtcaatcttagaaaagacacaagcaccttgtaactgatcgaacaagtcattaatgcgaggaagaggatacttgttctttatggttaccttgttcaactgccggtagcctatgcacatccgaaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="71218" stop="70023"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70918" g_stop="70323" g_length="596"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="596" r_length="596" r_score="0.948"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-E375319" ref_strand="+">
        <total_alignment_score>0.948</total_alignment_score>
        <cumulative_length_of_scored_exons>596</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E375319" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70918" e_stop="70323"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACTGCATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCCTCATGTTCCTTCTTGATCTTTGAGTATACCAATATATCATCAATAAATACGATCACAAATAGATCCAGATATAGCTTAAAAATCCCGTTCATCAAACTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATACCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAGAAGACACAAGCTCCTTGTAACTGATCGAACAAGTCATCAATGCGAGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTTAGTTGTCTGTAGTCTATGCACATTCGAAAAC</genome_strand>
        <mrna_strand>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTTCCCCAAGAAGGACACTACATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAACTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTCCTTACTTTTAGAGTATATCAGTATATCATCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCTTTTATTAAACTCATAAACGCAGCAGGGGCATTCATAAGACCAAAAGACATCACTACAAATTTGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAAAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATTAATGCGAGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTCAACTGCCGGTAGCCTATGCACATCCGAAAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E204434" ref_strand="+" ref_description="SGN-E204434 [cLEC-13-J16]">
      <seq>gaatcccttgacaaatcggcggtagtagctagctaacccaacaaagctccttatttctgacacattagtaggtcttacccaattcttcactgtctcaatcttagaaggatccaccatcactccatccttagaaaccacgttccccaagaaggacactacatctagccaaaactcacacttagagaacttggcataaaactttttctccctcaacatttccaataccattctcaaatgctcttcatgttcctccttacttttagagtatatcagtatatcatcaataaatacgatcacaaagagatccaaatatggcttaaaaatcccttttattaaactcataaacgcagcaggggcattcataagaccaaaagacatcactacaaatttgtaatgcccatacctggttctaaaagcagtctttggcacatccgttgcccgtattttcaattgatgataaccggatctcaagtcaatcttagaaaagacacaagcaccttgtaactgatcgaacaagtcattaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="71218" stop="70093"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70918" g_stop="70393" g_length="526"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="526" r_length="526" r_score="0.954"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-E204434" ref_strand="+">
        <total_alignment_score>0.954</total_alignment_score>
        <cumulative_length_of_scored_exons>526</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E204434" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70918" e_stop="70393"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACTGCATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCCTCATGTTCCTTCTTGATCTTTGAGTATACCAATATATCATCAATAAATACGATCACAAATAGATCCAGATATAGCTTAAAAATCCCGTTCATCAAACTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATACCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAGAAGACACAAGCTCCTTGTAACTGATCGAACAAGTCATCAATG</genome_strand>
        <mrna_strand>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTTCCCCAAGAAGGACACTACATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAACTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTCCTTACTTTTAGAGTATATCAGTATATCATCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCTTTTATTAAACTCATAAACGCAGCAGGGGCATTCATAAGACCAAAAGACATCACTACAAATTTGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAAAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATTAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E240817" ref_strand="+" ref_description="SGN-E240817 [cLED-24-J5]">
      <seq>gtctcacccatttcttcactgtctcaatcttaccaggatccaccatcactccatccttagaaaccacgtgccccaagaaggacactgcatctatccaaaactcacacttagagaacttggcataaagctttttctccctcaacatttctaatacaattctcaaatgctcctcatgttccttcttactattagaggatatcagtatatcatcaatgaacatgatgacgcagagatccaaatatggcttaaaatcccgttcatcaagctcatgaacgcagcaggggcattcgtaagaccaaaagacatcactacaaattcgtaatgcccatacctggttctaaaagcagtctttggcaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="71147" stop="70189"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70847" g_stop="70489" g_length="359"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="358" r_length="358" r_score="0.928"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-E240817" ref_strand="+">
        <total_alignment_score>0.928</total_alignment_score>
        <cumulative_length_of_scored_exons>359</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E240817" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70847" e_stop="70489"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACTGCATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCCTCATGTTCCTTCTTGATCTTTGAGTATACCAATATATCATCAATAAATACGATCACAAATAGATCCAGATATAGCTTAAAAATCCCGTTCATCAAACTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATACCCATACCTGGTTCTAAAAGCAGTCTTTGGCACA</genome_strand>
        <mrna_strand>GTCTCACCCATTTCTTCACTGTCTCAATCTTACCAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACTGCATCTATCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCTAATACAATTCTCAAATGCTCCTCATGTTCCTTCTTACTATTAGAGGATATCAGTATATCATCAATGAACATGATGACGCAGAGATCCAAATATGGCTT-AAAATCCCGTTCATCAAGCTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E577888" ref_strand="+" ref_description="SGN-E577888 [LE08BA01]">
      <seq>ctacatctcctaccatacaatgcttcaaatggagccatatcaatgcttgattgatagctattattgtatgaaaactccgctaagggtaggaagctatcccaatgaccaccaaactctatcacacacgcacgaagcatattctccaacacttgaatcgttcgctcagactgaccatcgggagaactagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="72697" stop="71920"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72397" g_stop="72221" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="177" r_length="177" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-E577888" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>177</cumulative_length_of_scored_exons>
        <coverage percentage="0.941" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E577888" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72397" e_stop="72221"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTACATCTCCTACCATACAATGCTTCAAATGGAGCCATATCAATGCTTGAGTGATAGCTATTATTGTATGAAAACTCCGCTAAGGGTAAGAAGTTATCCCAATGGCCACCAAATTCTATCACACACACATGAAGCATATCCTCCAACACTTGAATCGTTCGCTCAGACTGACCATCG</genome_strand>
        <mrna_strand>CTACATCTCCTACCATACAATGCTTCAAATGGAGCCATATCAATGCTTGATTGATAGCTATTATTGTATGAAAACTCCGCTAAGGGTAGGAAGCTATCCCAATGACCACCAAACTCTATCACACACGCACGAAGCATATTCTCCAACACTTGAATCGTTCGCTCAGACTGACCATCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E231589" ref_strand="+" ref_description="SGN-E231589 [cLED-4-L18]">
      <seq>tcgattctccttctctctctttctgttcttttctttttcttattcaaaccctccttcttttaccctaattagcatataattaagaataaaagatggaataataacccactaatttactcaaggttacctcttttaacccccaggtaattagacttattaacataaacccactaactttataattaaagtaggaatagtccaaaacgtcccttaaaacgtgtaaagaaatccgacccagactgggattacgcaacctgtgatggcccgtcgtgcctgcgacggtccgtcctgcaggtcgtcgcaaggttcatagactcaatttccaccaaagagtctgtgacggtccgtcacgcccgtgacggtccgtcgtgccattccgttacgaagttcagagagtcgatttttagtacccaatttcagaatttctaagtgttttgaaacgagactcctcgacggtccatcgtgctcatgacggtccgtcgtgggttccgtcgtctcaacctgtttttccaaaaataaaatctgctactcaaaacgactaaacaggtcgttacattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="73911" stop="72754"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73611" g_stop="73053" g_length="559"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="558" r_length="558" r_score="0.921"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-E231589" ref_strand="+">
        <total_alignment_score>0.921</total_alignment_score>
        <cumulative_length_of_scored_exons>559</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E231589" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73611" e_stop="73053"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGATTCTCCTTCTCTCTCTTTCTGTTCTTTTCTTTTTCTTA-TCAAAACCTCTTTCTTTTACCCTAATTAGCATATAATTTAAGAATAAAATATGGCAATAATAACCCACTAATTTACTCAAGGTTACCTCTTTTAACCCCCAAGTAATTAGACTTATTAACATAAACCCACTAACTTTATAATTAAAGTAGGAATAGTCCAAAACGTCCCTTAAAACGTGTAAAGAAATTTGACCTCGCCTGAGATTACGCAGCCTGTGACGGGTCGTCGTGCCTGCGACGGTCCGTCCTGCTGCTCCGTCACAGAGTTCAGAGACTGAAATT-CTCTGAAGAGTGTGTGACGGTCCGTCACGCCTGTGACGGTCCGTCCTGCTATTCCGTTACGAAGTTCAGAGAGTCGATTTTCAGTACCCAATTTCAGAATTTCTAAGTGTTTTGAAACGAGACCCCTCGACGGTCCGTCGTGCCCATGACGGTCCGTCGTGGGTTCCGTCGTCTCAGCCTGTTTTTCCAGAAATAAAATCTGCTACTCAAAACGACTAAACAGGTCGTTACAATA</genome_strand>
        <mrna_strand>TCGATTCTCCTTCTCTCTCTTTCTGTTCTTTTCTTTTTCTTATTCAAACCCTCCTTCTTTTACCCTAATTAGCATATAA-TTAAGAATAAAAGATGG-AATAATAACCCACTAATTTACTCAAGGTTACCTCTTTTAACCCCCAGGTAATTAGACTTATTAACATAAACCCACTAACTTTATAATTAAAGTAGGAATAGTCCAAAACGTCCCTTAAAACGTGTAAAGAAATCCGACCCAGACTGGGATTACGCAACCTGTGATGGCCCGTCGTGCCTGCGACGGTCCGTCCTGCAGGT-CGTCGCAAGGTTCATAGACTCAATTTCCACCAAAGAGTCTGTGACGGTCCGTCACGCCCGTGACGGTCCGTCGTGCCATTCCGTTACGAAGTTCAGAGAGTCGATTTTTAGTACCCAATTTCAGAATTTCTAAGTGTTTTGAAACGAGACTCCTCGACGGTCCATCGTGCTCATGACGGTCCGTCGTGGGTTCCGTCGTCTCAACCTGTTTTTCCAAAAATAAAATCTGCTACTCAAAACGACTAAACAGGTCGTTACATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E396058" ref_strand="+" ref_description="SGN-E396058 [TUS-18-N22]">
      <seq>atcgattctccttctctctctttctgttcttttctttttcttattcaaaccctccttcttttaccctaattagcatataattaagaataaaagatggaataataacccactaatttactcaaggttacctcttttaacccccaggtaattagacttattaacataaacccactaactttataattaaagtaggaatagtccaaaacgtcccttaaaacgtgtaaagaaatccgacccagactgggattacgcaacctgtgatggcccgtcgtgcctgcgacggtccgtcctgcaggtcgtcgcaaggttcagagactcaatttccaccaaagagtctgtgacggtccgtcacgcccgtgacggtccgtcgtgccattccgttacgaagttcagagagtcgatttttagtacccaatttcagaatttctaagtgttttgaaacgagactcctcgacggtccatcgtgctcatgacggtccgtcgtgggttccgtcgtctcaacctgtgtttccaaaaataaaatctgctactcacaacgactaaacaggtcgttacatttaggttcttcatagttaactattattattattttacgatttataacactatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="73912" stop="72748"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73612" g_stop="73056" g_length="557"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="556" r_length="556" r_score="0.923"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-E396058" ref_strand="+">
        <total_alignment_score>0.923</total_alignment_score>
        <cumulative_length_of_scored_exons>557</cumulative_length_of_scored_exons>
        <coverage percentage="0.913" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E396058" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73612" e_stop="73056"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCGATTCTCCTTCTCTCTCTTTCTGTTCTTTTCTTTTTCTTA-TCAAAACCTCTTTCTTTTACCCTAATTAGCATATAATTTAAGAATAAAATATGGCAATAATAACCCACTAATTTACTCAAGGTTACCTCTTTTAACCCCCAAGTAATTAGACTTATTAACATAAACCCACTAACTTTATAATTAAAGTAGGAATAGTCCAAAACGTCCCTTAAAACGTGTAAAGAAATTTGACCTCGCCTGAGATTACGCAGCCTGTGACGGGTCGTCGTGCCTGCGACGGTCCGTCCTGCTGCTCCGTCACAGAGTTCAGAGACTGAAATT-CTCTGAAGAGTGTGTGACGGTCCGTCACGCCTGTGACGGTCCGTCCTGCTATTCCGTTACGAAGTTCAGAGAGTCGATTTTCAGTACCCAATTTCAGAATTTCTAAGTGTTTTGAAACGAGACCCCTCGACGGTCCGTCGTGCCCATGACGGTCCGTCGTGGGTTCCGTCGTCTCAGCCTGTTTTTCCAGAAATAAAATCTGCTACTCAAAACGACTAAACAGGTCGTTACA</genome_strand>
        <mrna_strand>ATCGATTCTCCTTCTCTCTCTTTCTGTTCTTTTCTTTTTCTTATTCAAACCCTCCTTCTTTTACCCTAATTAGCATATAA-TTAAGAATAAAAGATGG-AATAATAACCCACTAATTTACTCAAGGTTACCTCTTTTAACCCCCAGGTAATTAGACTTATTAACATAAACCCACTAACTTTATAATTAAAGTAGGAATAGTCCAAAACGTCCCTTAAAACGTGTAAAGAAATCCGACCCAGACTGGGATTACGCAACCTGTGATGGCCCGTCGTGCCTGCGACGGTCCGTCCTGCAGGT-CGTCGCAAGGTTCAGAGACTCAATTTCCACCAAAGAGTCTGTGACGGTCCGTCACGCCCGTGACGGTCCGTCGTGCCATTCCGTTACGAAGTTCAGAGAGTCGATTTTTAGTACCCAATTTCAGAATTTCTAAGTGTTTTGAAACGAGACTCCTCGACGGTCCATCGTGCTCATGACGGTCCGTCGTGGGTTCCGTCGTCTCAACCTGTGTTTCCAAAAATAAAATCTGCTACTCACAACGACTAAACAGGTCGTTACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E396054" ref_strand="+" ref_description="SGN-E396054 [TUS-18-N18]">
      <seq>atcgattctccttctctctctttctgttcttttctttttcttattcaaaccctccttcttttaccctaattagcatataattaagaataaaagatggaataataacccactaatttactcaaggttacctcttttaacccccaggtaattagacttattaacataaacccactaactttataattaaagtaggaatagtccaaaacgtcccttaaaacgtgtaaagaaatccgacccagactgggattacgcaacctgtgatggcccgtcgtgcctgcgacggtccgtcctgcaggtcgtcgcaaggttcagagactcaatttccaccaaagagtctgtgacggtccgtcacgcccgtgacggtccgtcgtgccattccgttacgaagttcagagagtcgatttttagtacccaatttcagaatttctaagtgttttgaaacgagactcctcgacggtccatcgtgctcatgacggtccgtcgtgggttccgtcgtctcaacctgtttttccaaaaataaaatctgctactcaaaacgactaaacaggtcgttacatttatgttcttcctacttaaatattattattattttacgatttataacactattagaaacaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="73912" stop="72750"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73612" g_stop="73056" g_length="557"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="556" r_length="556" r_score="0.926"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-E396054" ref_strand="+">
        <total_alignment_score>0.926</total_alignment_score>
        <cumulative_length_of_scored_exons>557</cumulative_length_of_scored_exons>
        <coverage percentage="0.901" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E396054" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73612" e_stop="73056"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCGATTCTCCTTCTCTCTCTTTCTGTTCTTTTCTTTTTCTTA-TCAAAACCTCTTTCTTTTACCCTAATTAGCATATAATTTAAGAATAAAATATGGCAATAATAACCCACTAATTTACTCAAGGTTACCTCTTTTAACCCCCAAGTAATTAGACTTATTAACATAAACCCACTAACTTTATAATTAAAGTAGGAATAGTCCAAAACGTCCCTTAAAACGTGTAAAGAAATTTGACCTCGCCTGAGATTACGCAGCCTGTGACGGGTCGTCGTGCCTGCGACGGTCCGTCCTGCTGCTCCGTCACAGAGTTCAGAGACTGAAATT-CTCTGAAGAGTGTGTGACGGTCCGTCACGCCTGTGACGGTCCGTCCTGCTATTCCGTTACGAAGTTCAGAGAGTCGATTTTCAGTACCCAATTTCAGAATTTCTAAGTGTTTTGAAACGAGACCCCTCGACGGTCCGTCGTGCCCATGACGGTCCGTCGTGGGTTCCGTCGTCTCAGCCTGTTTTTCCAGAAATAAAATCTGCTACTCAAAACGACTAAACAGGTCGTTACA</genome_strand>
        <mrna_strand>ATCGATTCTCCTTCTCTCTCTTTCTGTTCTTTTCTTTTTCTTATTCAAACCCTCCTTCTTTTACCCTAATTAGCATATAA-TTAAGAATAAAAGATGG-AATAATAACCCACTAATTTACTCAAGGTTACCTCTTTTAACCCCCAGGTAATTAGACTTATTAACATAAACCCACTAACTTTATAATTAAAGTAGGAATAGTCCAAAACGTCCCTTAAAACGTGTAAAGAAATCCGACCCAGACTGGGATTACGCAACCTGTGATGGCCCGTCGTGCCTGCGACGGTCCGTCCTGCAGGT-CGTCGCAAGGTTCAGAGACTCAATTTCCACCAAAGAGTCTGTGACGGTCCGTCACGCCCGTGACGGTCCGTCGTGCCATTCCGTTACGAAGTTCAGAGAGTCGATTTTTAGTACCCAATTTCAGAATTTCTAAGTGTTTTGAAACGAGACTCCTCGACGGTCCATCGTGCTCATGACGGTCCGTCGTGGGTTCCGTCGTCTCAACCTGTTTTTCCAAAAATAAAATCTGCTACTCAAAACGACTAAACAGGTCGTTACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E241959" ref_strand="+" ref_description="SGN-E241959 [cLED-27-I11]">
      <seq>tcgattctccttctctctctttctgttcttttctttttcttattcaaaccctccttcttttaccctaattagcatataattaagaataaaagatggaataataacccactaatttactcaaggttacctcttttaacccccaggtaattagacttattaacataaacccactaactttataattaaagtaggaatagtccaaaacgtcccttaaaacgtgtaaagaaatccgacccagactgggattacgcaacctgtgatggcccgtcgtgcctgcgacggtccgtcctgcaggtcgtcgcaaggttcagagactcaatttccaccaaagagtctgtgacggtccgtcacgcccgtgacggtccgtcgtgccattccgttacgaagttcagagagtcgatttttagtacccaatttcagaatttctaagtgttttgaaacgagactcctcgacggtccatcgtgctcatgacggtccgtcgtgggttccgtcgtctcaacctgtttttccaaaaataaaatctgctactcaaaacgactaaaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="73911" stop="72766"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73611" g_stop="73066" g_length="546"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="545" r_length="545" r_score="0.925"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-E241959" ref_strand="+">
        <total_alignment_score>0.925</total_alignment_score>
        <cumulative_length_of_scored_exons>546</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E241959" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73611" e_stop="73066"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGATTCTCCTTCTCTCTCTTTCTGTTCTTTTCTTTTTCTTA-TCAAAACCTCTTTCTTTTACCCTAATTAGCATATAATTTAAGAATAAAATATGGCAATAATAACCCACTAATTTACTCAAGGTTACCTCTTTTAACCCCCAAGTAATTAGACTTATTAACATAAACCCACTAACTTTATAATTAAAGTAGGAATAGTCCAAAACGTCCCTTAAAACGTGTAAAGAAATTTGACCTCGCCTGAGATTACGCAGCCTGTGACGGGTCGTCGTGCCTGCGACGGTCCGTCCTGCTGCTCCGTCACAGAGTTCAGAGACTGAAATT-CTCTGAAGAGTGTGTGACGGTCCGTCACGCCTGTGACGGTCCGTCCTGCTATTCCGTTACGAAGTTCAGAGAGTCGATTTTCAGTACCCAATTTCAGAATTTCTAAGTGTTTTGAAACGAGACCCCTCGACGGTCCGTCGTGCCCATGACGGTCCGTCGTGGGTTCCGTCGTCTCAGCCTGTTTTTCCAGAAATAAAATCTGCTACTCAAAACGACTAAACA</genome_strand>
        <mrna_strand>TCGATTCTCCTTCTCTCTCTTTCTGTTCTTTTCTTTTTCTTATTCAAACCCTCCTTCTTTTACCCTAATTAGCATATAA-TTAAGAATAAAAGATGG-AATAATAACCCACTAATTTACTCAAGGTTACCTCTTTTAACCCCCAGGTAATTAGACTTATTAACATAAACCCACTAACTTTATAATTAAAGTAGGAATAGTCCAAAACGTCCCTTAAAACGTGTAAAGAAATCCGACCCAGACTGGGATTACGCAACCTGTGATGGCCCGTCGTGCCTGCGACGGTCCGTCCTGCAGGT-CGTCGCAAGGTTCAGAGACTCAATTTCCACCAAAGAGTCTGTGACGGTCCGTCACGCCCGTGACGGTCCGTCGTGCCATTCCGTTACGAAGTTCAGAGAGTCGATTTTTAGTACCCAATTTCAGAATTTCTAAGTGTTTTGAAACGAGACTCCTCGACGGTCCATCGTGCTCATGACGGTCCGTCGTGGGTTCCGTCGTCTCAACCTGTTTTTCCAAAAATAAAATCTGCTACTCAAAACGACTAAACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E236652" ref_strand="+" ref_description="SGN-E236652 [cLED-13-L8]">
      <seq>tcgattctccttctctctctttctgttcttttctttttcttattcaaaccctccttcttttaccctaattagcatataattaagaataaaagatggaataataacccactaatttactcaaggttacctcttttaacccccaggtaattagacttattaacataaacccactaactttataattaaagtaggaatagtccaaaacgtcccttaaaacgtgtaaagaaatccgacccagactgggattacgcaacctgtgatggcccgtcgtgcctgcgacggtccgtcctgcaggtcgtcgcaaggttcagagactcaatttccaccaaagagtctgtgacggtccgtcacgcccgtgacggtccgtcgtgccattccgttacgaagttcagagagtcgatttttagtacccaatttcagaatttctaagtgttttgaaacgagactcctcgacggtccatcgtgctcatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="73911" stop="72839"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73611" g_stop="73139" g_length="473"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="472" r_length="472" r_score="0.918"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-E236652" ref_strand="+">
        <total_alignment_score>0.918</total_alignment_score>
        <cumulative_length_of_scored_exons>473</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E236652" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73611" e_stop="73139"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGATTCTCCTTCTCTCTCTTTCTGTTCTTTTCTTTTTCTTA-TCAAAACCTCTTTCTTTTACCCTAATTAGCATATAATTTAAGAATAAAATATGGCAATAATAACCCACTAATTTACTCAAGGTTACCTCTTTTAACCCCCAAGTAATTAGACTTATTAACATAAACCCACTAACTTTATAATTAAAGTAGGAATAGTCCAAAACGTCCCTTAAAACGTGTAAAGAAATTTGACCTCGCCTGAGATTACGCAGCCTGTGACGGGTCGTCGTGCCTGCGACGGTCCGTCCTGCTGCTCCGTCACAGAGTTCAGAGACTGAAATT-CTCTGAAGAGTGTGTGACGGTCCGTCACGCCTGTGACGGTCCGTCCTGCTATTCCGTTACGAAGTTCAGAGAGTCGATTTTCAGTACCCAATTTCAGAATTTCTAAGTGTTTTGAAACGAGACCCCTCGACGGTCCGTCGTGCCCATGA</genome_strand>
        <mrna_strand>TCGATTCTCCTTCTCTCTCTTTCTGTTCTTTTCTTTTTCTTATTCAAACCCTCCTTCTTTTACCCTAATTAGCATATAA-TTAAGAATAAAAGATGG-AATAATAACCCACTAATTTACTCAAGGTTACCTCTTTTAACCCCCAGGTAATTAGACTTATTAACATAAACCCACTAACTTTATAATTAAAGTAGGAATAGTCCAAAACGTCCCTTAAAACGTGTAAAGAAATCCGACCCAGACTGGGATTACGCAACCTGTGATGGCCCGTCGTGCCTGCGACGGTCCGTCCTGCAGGT-CGTCGCAAGGTTCAGAGACTCAATTTCCACCAAAGAGTCTGTGACGGTCCGTCACGCCCGTGACGGTCCGTCGTGCCATTCCGTTACGAAGTTCAGAGAGTCGATTTTTAGTACCCAATTTCAGAATTTCTAAGTGTTTTGAAACGAGACTCCTCGACGGTCCATCGTGCTCATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E242359" ref_strand="+" ref_description="SGN-E242359 [cLEE-3-K21]">
      <seq>cctaatctactttgttaataatgatgccttggtataaaagaaggcttgatgaacgaaagtggtgagattaggggatcgggtgccacgttccggtaccaggatagaatatggatcgggtgtcacgttccgacaccaggatagaatatggatcgggtgccacgttccggtaccaggatagaatatggatcgggtgtcacgttccgacaccaggatagaatatggatcgggtgtcacgttctgacaccaggatagaatatggatcgggtgccacgttccggtgccaggatagtatattgaggagtggagtgtcacgtaaggacacgaggggaataaatatgatgaatcttgaaatatgttaatatatgcaatccaatgaactaaattcccaaataagtatgatgaggaggtgtgagtcctcattgatgtgcttggtgatgcaaccaagggttatggtaattgcaaatgctgcatgctaaggatattagttaattttatgatattgcttaatacatact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="73559" stop="74663"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73859" g_stop="74377" g_length="519"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="515" r_length="515" r_score="0.902"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-E242359" ref_strand="+">
        <total_alignment_score>0.902</total_alignment_score>
        <cumulative_length_of_scored_exons>519</cumulative_length_of_scored_exons>
        <coverage percentage="1.008" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E242359" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73859" e_stop="74377"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTAATCT-CTTTGTTAATGATGAGACCTTGGCATAAAAGAAGGCTTGATGAACGAAAGTAGTGAGATTAGGGGATCGGGTGCCACGTTCCGGTACCAGGATAGTATATGAGGATCGGAGTGTCACGTTCCGACACCAGGATAGAATATGGATCGGGTGCCACGTTCCGGTACCAGGATAGAATGAGGATCGGAGTGTCACGTTCCGACACCAGGATAGTATATGGATCGGGTGCCACGTTCCGGTACCAGGATAGAATGAGGATCGGAGTGTCACGTTCCGACACCAGGATAGTATATTGAGGAGCGGAGTGTCACGTACCGACACGAGAGGAATAAAGATAATGAATCTTGAAAGATGTTAATATATTCAATCTAATGAACCTAATTCCCAAATGAGTATGATGAGGAGGTGTGAGTCCTCATTGATGAGCTTAGTGTTGTAACCAAGGGTTATGGTAATCGTAAATGCTACATGCTAAGGATATTAGTTGATTTTATGATATTATCTGATATATACT</genome_strand>
        <mrna_strand>CCTAATCTACTTTGTTAATAATGATGCCTTGGTATAAAAGAAGGCTTGATGAACGAAAGTGGTGAGATTAGGGGATCGGGTGCCACGTTCCGGTACCAGGATAGAATAT--GGATCGG-GTGTCACGTTCCGACACCAGGATAGAATATGGATCGGGTGCCACGTTCCGGTACCAGGATAGAATATGGATCGG-GTGTCACGTTCCGACACCAGGATAGAATATGGATCGGGTGTCACGTTCTGACACCAGGATAGAATATGGATCGG-GTGCCACGTTCCGGTGCCAGGATAGTATATTGAGGAGTGGAGTGTCACGTAAGGACACGAGGGGAATAAATATGATGAATCTTGAAATATGTTAATATATGCAATCCAATGAACTAAATTCCCAAATAAGTATGATGAGGAGGTGTGAGTCCTCATTGATGTGCTTGGTGATGCAACCAAGGGTTATGGTAATTGCAAATGCTGCATGCTAAGGATATTAGTTAATTTTATGATATTGCTTAATACATACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E298638" ref_strand="+" ref_description="SGN-E298638 [cLET-44-A20]">
      <seq>tcattacatcggatttcagggtgagctaacgcttctagcttggactggatcttcttcttcatgtcttgatgccttgaagttccggcatggactagctgtttatgtattttagcttcttagatactcttagatttagtaatttgaagtacatgttcttgtgatgatgactgccagattttggggataataatagttgttgagtttttagaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="74229" stop="75021"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="74520" g_stop="74718" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="200" r_length="200" r_score="0.925"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="207" polyA_stop="219"/>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-E298638" ref_strand="+">
        <total_alignment_score>0.925</total_alignment_score>
        <cumulative_length_of_scored_exons>199</cumulative_length_of_scored_exons>
        <coverage percentage="0.909" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E298638" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="74520" e_stop="74718"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATTATTCCGGATATCAGGGTGAGCTAATGCTTCTAGCTTGGACTGGATCTTCCTCTTCATGTCTTGATGCCTTGAAGTTCCGGCATGGACTAGCT-TTTATGTATTTTTAGCTTCTTAGAAACTCTTAGATTTAGTAATTTGAAGTAGATGTTCTTGTGATGATGACTTCCAGATTTTGGGGA-AATAATAGTTATTGA</genome_strand>
        <mrna_strand>TCATTACATCGGATTTCAGGGTGAGCTAACGCTTCTAGCTTGGACTGGATCTTCTTCTTCATGTCTTGATGCCTTGAAGTTCCGGCATGGACTAGCTGTTTATGTA-TTTTAGCTTCTTAGATACTCTTAGATTTAGTAATTTGAAGTACATGTTCTTGTGATGATGACTGCCAGATTTTGGGGATAATAATAGTTGTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E542915" ref_strand="+" ref_description="SGN-E542915 [TUS-64-H10]">
      <seq>tttttttttattgtcatcctcgcaattttcacccaaaatcacacggtccaattggatccccaatttcggattgcgatgcttcttataaatacaaacaatttctaccatgctttctccctcgttttctccaaacacaaatttcctctatctgcagcctctcctccaccacccaaatcatcattttctcaggcctctgattcaattacaaagaacaaattgaagttacctttggtttctttgaccaaatctttgccaaatacacaatttgatcttattcagagcgagaaaatggtgaatttcatgatggataagtatattgttcccagttttgttgtttctctattggggttccttcttctttatgttttgcgaccaagaacccccaattataagaaaatggatcttaaatctacccgaaaatgtgaaacccacaacgtaatttctagaaaattggagaaagggaccgatgccgatgttataattgttggagctggggttgctggtgctgctcttgctcatacccttgctaaggaaggacgaaatgttcacgtcatcgaaagggatttgacagagccggaccggattgttggcgaattgcttcagcctgggggttatcttaaaatgattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="79545" stop="81655"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79845" g_stop="80375" g_length="531"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="531" r_length="531" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="80376" i_stop="81258" i_length="883">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81259" g_stop="81355" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="532" r_stop="628" r_length="97" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-E542915" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>628</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E542915" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79845" e_stop="80375"/>
          <exon e_start="81259" e_stop="81355"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTTTTTATTGTCATCCTCGCAATTTTCACCCAAAATCACACGGTCCAATTGGATCCCCAATTTCGGATTGCGATGCTTCTTATAAATACAAACAATTTCTACCATGCTTTCTCCCTCGTTTTCTCCAAACACAAATTTCCTCTATCTGCAGCCTCTCCTCCACCACCCAAATCATCATTTTCTCAGGCCTCTGATTCAATTACAAAGAACAAATTGAAGTTACCTTTGGTTTCTTTGACCAAATCTTTGCCAAATACACAATTTGATCTTATTCAGAGCGAGAAAATGGTGAATTTCATGATGGATAAGTATATTGTTCCCAGTTTTGTTGTTTCTCTATTGGGGTTCCTTCTTCTTTATGTTTTGCGACCAAGAACCCCCAATTATAAGAAAATGGATCTTAAATCTACCCGAAAATGTGAAACCCACAACGTAATTTCTAGAAAATTGGAGAAAGGGACCGATGCCGATGTTATAATTGTTGGAGCTGGGGTTGCTGGTGCTGCTCTTGCTCATACCCTTGCTAAGGTCTATTCCCAATTGCTTTCTAATTTACGGTTTTCATATTTCTAAAAGTCCCTTTGAAAGAAATGAAAATTTTCTTATCGGCAAGGTCATAATATTGGAATGGAAGGAAGCATGATGAAAAAATTGTATTTGGATACGGAAAATTCCTCTTACTATTATTATGTTTTCCTCACTGTTTTCTGTTTCTTTATACCTGAAATTGCTGCACTTGAGCCGATTGTCTCTTCGAAACAATCTCTCTGTATTAGGTAATGGTAAGGTCCTATGTACACCCTACCCTCGCCAGATCCCACTTGTGGGATTTCATCATTATGTTGTTCTTGTTGGATATGCAAAATCCATGAAAAAAAATCTAAACTTTTAGCTCCCCTCCAAGAGGTCTTTAGAATATGAATTATTTGCATGTATGATACTAGTTCCTTTACTGGGCACTTTATCTTATCAAGAGTTAATTGGACCAACTTTTAGAAATAAATTGTAGATAAATTCATTTTTCCTTTAATGAAAATTGAAATGACCGGAAACCATAGGGAAAGTACTATAAGTTGCAATTCTTCTCGTATCAAAATGATAAAAGAAGACGATCTAATGATGTGGTCTCAATTTCACATAGTTTGAAACTTGGGAAGGGACATAGGCTAAGCATTTCGAGAAGAGGGAGTAGACTATTTTGTTTAATGCAACATACAGGTGCTGTTAATATTCTTATCTTGATGGTAAGTTGTGATCTGTAATGGCTTGCCTTGTCATGGAAAATTTGGTTTTTGATTCCTAACACTTGTGTCCACGAGCAGGAAACAAGAAAATGTTTGTCTAGTGACTTTTACCAATTGTCCTGATCCCCCTTTAGCATCTAAACATTTGTTTTTTGCCACTGCTGCAGGAAGGACGAAATGTTCACGTCATCGAAAGGGATTTGACAGAGCCGGACCGGATTGTTGGCGAATTGCTTCAGCCTGGGGGTTATCTTAAATTGATTG</genome_strand>
        <mrna_strand>TTTTTTTTTATTGTCATCCTCGCAATTTTCACCCAAAATCACACGGTCCAATTGGATCCCCAATTTCGGATTGCGATGCTTCTTATAAATACAAACAATTTCTACCATGCTTTCTCCCTCGTTTTCTCCAAACACAAATTTCCTCTATCTGCAGCCTCTCCTCCACCACCCAAATCATCATTTTCTCAGGCCTCTGATTCAATTACAAAGAACAAATTGAAGTTACCTTTGGTTTCTTTGACCAAATCTTTGCCAAATACACAATTTGATCTTATTCAGAGCGAGAAAATGGTGAATTTCATGATGGATAAGTATATTGTTCCCAGTTTTGTTGTTTCTCTATTGGGGTTCCTTCTTCTTTATGTTTTGCGACCAAGAACCCCCAATTATAAGAAAATGGATCTTAAATCTACCCGAAAATGTGAAACCCACAACGTAATTTCTAGAAAATTGGAGAAAGGGACCGATGCCGATGTTATAATTGTTGGAGCTGGGGTTGCTGGTGCTGCTCTTGCTCATACCCTTGCTAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGACGAAATGTTCACGTCATCGAAAGGGATTTGACAGAGCCGGACCGGATTGTTGGCGAATTGCTTCAGCCTGGGGGTTATCTTAAAATGATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E302912" ref_strand="+" ref_description="SGN-E302912 [cLEW-26-I12]">
      <seq>ttttttttattgtcatcctcgcaattttcacccaaaatcacacggtccaattggatccccaatttcggattgcgatgcttcttataaatacaaacaatttctaccatgctttctccctcgttttctccaaacacaaatttcctctatctgcagcctctcctccaccacccaaatcatcattttctcaggcctctgattcaattacaaagaacaaattgaagttacctttggtttctttgaccaaatctttgccaaatacacaatttgatcttattcagagcgagaaaatggtgaatttcatgatggataagtatattgttcccagttttgttgtttctctattggggttccttcttctttatgttttgcgaccaagaacccccaattataagaaaatggatcttaaatctacccgaaaatgtgaaacccacaacgtaatttctagaaaattggagaaagggaccgatgccgatgttataattgttggagctggggttgctggtgctgctcttgctcatacccttgctaaggaaggacgaaatgttcacgtcatcgaaagggatttgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="79546" stop="81596"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79846" g_stop="80375" g_length="530"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="530" r_length="530" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="80376" i_stop="81258" i_length="883">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81259" g_stop="81296" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="531" r_stop="568" r_length="38" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-E302912" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>568</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E302912" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79846" e_stop="80375"/>
          <exon e_start="81259" e_stop="81296"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTTTTATTGTCATCCTCGCAATTTTCACCCAAAATCACACGGTCCAATTGGATCCCCAATTTCGGATTGCGATGCTTCTTATAAATACAAACAATTTCTACCATGCTTTCTCCCTCGTTTTCTCCAAACACAAATTTCCTCTATCTGCAGCCTCTCCTCCACCACCCAAATCATCATTTTCTCAGGCCTCTGATTCAATTACAAAGAACAAATTGAAGTTACCTTTGGTTTCTTTGACCAAATCTTTGCCAAATACACAATTTGATCTTATTCAGAGCGAGAAAATGGTGAATTTCATGATGGATAAGTATATTGTTCCCAGTTTTGTTGTTTCTCTATTGGGGTTCCTTCTTCTTTATGTTTTGCGACCAAGAACCCCCAATTATAAGAAAATGGATCTTAAATCTACCCGAAAATGTGAAACCCACAACGTAATTTCTAGAAAATTGGAGAAAGGGACCGATGCCGATGTTATAATTGTTGGAGCTGGGGTTGCTGGTGCTGCTCTTGCTCATACCCTTGCTAAGGTCTATTCCCAATTGCTTTCTAATTTACGGTTTTCATATTTCTAAAAGTCCCTTTGAAAGAAATGAAAATTTTCTTATCGGCAAGGTCATAATATTGGAATGGAAGGAAGCATGATGAAAAAATTGTATTTGGATACGGAAAATTCCTCTTACTATTATTATGTTTTCCTCACTGTTTTCTGTTTCTTTATACCTGAAATTGCTGCACTTGAGCCGATTGTCTCTTCGAAACAATCTCTCTGTATTAGGTAATGGTAAGGTCCTATGTACACCCTACCCTCGCCAGATCCCACTTGTGGGATTTCATCATTATGTTGTTCTTGTTGGATATGCAAAATCCATGAAAAAAAATCTAAACTTTTAGCTCCCCTCCAAGAGGTCTTTAGAATATGAATTATTTGCATGTATGATACTAGTTCCTTTACTGGGCACTTTATCTTATCAAGAGTTAATTGGACCAACTTTTAGAAATAAATTGTAGATAAATTCATTTTTCCTTTAATGAAAATTGAAATGACCGGAAACCATAGGGAAAGTACTATAAGTTGCAATTCTTCTCGTATCAAAATGATAAAAGAAGACGATCTAATGATGTGGTCTCAATTTCACATAGTTTGAAACTTGGGAAGGGACATAGGCTAAGCATTTCGAGAAGAGGGAGTAGACTATTTTGTTTAATGCAACATACAGGTGCTGTTAATATTCTTATCTTGATGGTAAGTTGTGATCTGTAATGGCTTGCCTTGTCATGGAAAATTTGGTTTTTGATTCCTAACACTTGTGTCCACGAGCAGGAAACAAGAAAATGTTTGTCTAGTGACTTTTACCAATTGTCCTGATCCCCCTTTAGCATCTAAACATTTGTTTTTTGCCACTGCTGCAGGAAGGACGAAATGTTCACGTCATCGAAAGGGATTTGAC</genome_strand>
        <mrna_strand>TTTTTTTTATTGTCATCCTCGCAATTTTCACCCAAAATCACACGGTCCAATTGGATCCCCAATTTCGGATTGCGATGCTTCTTATAAATACAAACAATTTCTACCATGCTTTCTCCCTCGTTTTCTCCAAACACAAATTTCCTCTATCTGCAGCCTCTCCTCCACCACCCAAATCATCATTTTCTCAGGCCTCTGATTCAATTACAAAGAACAAATTGAAGTTACCTTTGGTTTCTTTGACCAAATCTTTGCCAAATACACAATTTGATCTTATTCAGAGCGAGAAAATGGTGAATTTCATGATGGATAAGTATATTGTTCCCAGTTTTGTTGTTTCTCTATTGGGGTTCCTTCTTCTTTATGTTTTGCGACCAAGAACCCCCAATTATAAGAAAATGGATCTTAAATCTACCCGAAAATGTGAAACCCACAACGTAATTTCTAGAAAATTGGAGAAAGGGACCGATGCCGATGTTATAATTGTTGGAGCTGGGGTTGCTGGTGCTGCTCTTGCTCATACCCTTGCTAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGACGAAATGTTCACGTCATCGAAAGGGATTTGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E329185" ref_strand="+" ref_description="SGN-E329185 [cTOD-2-L23]">
      <seq>tctgcagcctctcctccaccacccaaatcatcattttctcaggcctctgattcaattacaaagaacaaattgaagttacctttggtttctttgaccaaatctttgccaaatacacaatttgatcttattcagagcgagaaaatggtgaatttcatgatggataagtatattgttcccagttttgttgtttctctattggggttccttcttctttatgttttgcgaccaagaacccccaattataagaaaatggatcttaaatctacccgaaaatgtgaaacccacaacgtaatttctagaaaattggagaaagggaccgatgccgatgttataattgttggagctggggttgctggtgctgctcttgctcatacccttgctaaggaaggacgaaatgttcacgtcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="79692" stop="81581"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79992" g_stop="80375" g_length="384"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="384" r_length="384" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="80376" i_stop="81258" i_length="883">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81259" g_stop="81281" g_length="23"/>
          <reference_exon_boundary r_type="cDNA" r_start="385" r_stop="407" r_length="23" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-E329185" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>407</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E329185" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79992" e_stop="80375"/>
          <exon e_start="81259" e_stop="81281"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTGCAGCCTCTCCTCCACCACCCAAATCATCATTTTCTCAGGCCTCTGATTCAATTACAAAGAACAAATTGAAGTTACCTTTGGTTTCTTTGACCAAATCTTTGCCAAATACACAATTTGATCTTATTCAGAGCGAGAAAATGGTGAATTTCATGATGGATAAGTATATTGTTCCCAGTTTTGTTGTTTCTCTATTGGGGTTCCTTCTTCTTTATGTTTTGCGACCAAGAACCCCCAATTATAAGAAAATGGATCTTAAATCTACCCGAAAATGTGAAACCCACAACGTAATTTCTAGAAAATTGGAGAAAGGGACCGATGCCGATGTTATAATTGTTGGAGCTGGGGTTGCTGGTGCTGCTCTTGCTCATACCCTTGCTAAGGTCTATTCCCAATTGCTTTCTAATTTACGGTTTTCATATTTCTAAAAGTCCCTTTGAAAGAAATGAAAATTTTCTTATCGGCAAGGTCATAATATTGGAATGGAAGGAAGCATGATGAAAAAATTGTATTTGGATACGGAAAATTCCTCTTACTATTATTATGTTTTCCTCACTGTTTTCTGTTTCTTTATACCTGAAATTGCTGCACTTGAGCCGATTGTCTCTTCGAAACAATCTCTCTGTATTAGGTAATGGTAAGGTCCTATGTACACCCTACCCTCGCCAGATCCCACTTGTGGGATTTCATCATTATGTTGTTCTTGTTGGATATGCAAAATCCATGAAAAAAAATCTAAACTTTTAGCTCCCCTCCAAGAGGTCTTTAGAATATGAATTATTTGCATGTATGATACTAGTTCCTTTACTGGGCACTTTATCTTATCAAGAGTTAATTGGACCAACTTTTAGAAATAAATTGTAGATAAATTCATTTTTCCTTTAATGAAAATTGAAATGACCGGAAACCATAGGGAAAGTACTATAAGTTGCAATTCTTCTCGTATCAAAATGATAAAAGAAGACGATCTAATGATGTGGTCTCAATTTCACATAGTTTGAAACTTGGGAAGGGACATAGGCTAAGCATTTCGAGAAGAGGGAGTAGACTATTTTGTTTAATGCAACATACAGGTGCTGTTAATATTCTTATCTTGATGGTAAGTTGTGATCTGTAATGGCTTGCCTTGTCATGGAAAATTTGGTTTTTGATTCCTAACACTTGTGTCCACGAGCAGGAAACAAGAAAATGTTTGTCTAGTGACTTTTACCAATTGTCCTGATCCCCCTTTAGCATCTAAACATTTGTTTTTTGCCACTGCTGCAGGAAGGACGAAATGTTCACGTCAT</genome_strand>
        <mrna_strand>TCTGCAGCCTCTCCTCCACCACCCAAATCATCATTTTCTCAGGCCTCTGATTCAATTACAAAGAACAAATTGAAGTTACCTTTGGTTTCTTTGACCAAATCTTTGCCAAATACACAATTTGATCTTATTCAGAGCGAGAAAATGGTGAATTTCATGATGGATAAGTATATTGTTCCCAGTTTTGTTGTTTCTCTATTGGGGTTCCTTCTTCTTTATGTTTTGCGACCAAGAACCCCCAATTATAAGAAAATGGATCTTAAATCTACCCGAAAATGTGAAACCCACAACGTAATTTCTAGAAAATTGGAGAAAGGGACCGATGCCGATGTTATAATTGTTGGAGCTGGGGTTGCTGGTGCTGCTCTTGCTCATACCCTTGCTAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGACGAAATGTTCACGTCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E746114" ref_strand="+" ref_description="SGN-E746114 [GI|47104940]">
      <seq>gaccaaatctttgccaaatacacaatttgatcttattcagagcgagaaaatggtgaatttcatgatggataagtatattgttcccagttttgttgtttctctattggggttccttcttctttatgttttgcgaccaagaacccccaattataagaaaatggatcttaaatctacccgaaaatgtgaaacccacaacgtaatttctagaaaattggagaaagggaccgatgccgatgttataattgttggagctggggttgctggtgctgctcttgctcatacccttgctaaggaaggacgaaatgttcacgtcatcgaaagggatttgacagagccggaccggattgttggcgaattgcttcagcctgggggttatcttaaattgattgagttgggcattgaagattgtgttgaggatattgatgcccagcgggtggttggatatgctcttttcaaggatggaaagagcacaaatgtttcctatcccttgaaaaacttccattcggatgtggctgggagaagctttcacaatgggcgcttcatacagaagatgagagaaaaagcagctactcttcccaatgtacgattggaacaaggcaccgtaacatccctgattgaagaaaatggatccattaagggtgttcagtacaaaactaaggctggccaagaacttaaagcacatgctcctcttacagtagtttgtgatgggtgcttctcaaacttgcgacgctcgctttgtgaccctaaggttgatgttccctcttgctttgttggtctggtattggaattggagaatgatcgacttccatacccaaaccatgggcatgttattctggcagatccttctcccatcttattttatcctatcagtagcacggaaattcgctgcttggtcgatgtacctggtcaaaagcttccttctcttgctaatggtgatatggcaaattatttgaaaactatggtagctccccaggtaccacctgagctacgtgatgcgtttctatctgcaattgataaggggcatattaaaactatgccaaacaggagcatgccagctgctccctatcctacacctggagctctgttgctaggcgattctttcaacatgcgccatccattaactggtgggggaatgactgttgcgctttcagacattgcagtattaaggaatcttcttatgccattgcaagacctgaatgacgcagatgagttgtgtaaatatctggagtcattttatactttgcgcaagccagtggcttccaccataaatactttggctggagctctgtataaggtgttctgtgcttctcctgatcaagcgaggagggagatgcgagatgcgtgttttgactatttgagccttggaggcacttgttcaactggacctgtagctctactctctggtcttgatcctaatccaatgagcttggtgctccatttctttgcagtggccgtttatggagttggtcgtttacttgtaccttttccttctccaaagaagttgtggatcggagctaaattaatattgtctgcatcaggcatcatatttcccatcataaaggcagaagggatccggcaaatgttctttccaacaacaataccagcatatcacagagctcctcccgtgaagacggagtcagattaagcagaaaatttgttgaagttttgttccatgaatagcattaacatttttgcagttcctttctcgaagcacgaaatgtaagttccactctcccctcaccccaaaccctacaatagaataagaatgacgacgaaaccttattgtaggcatattataccaaaaggaacttcaagtgtacgtattcattgaaatctaccttattgtaggcatattataccaaaaggaacttcaagtgtacgtattcatttaaatctagtcagactccctactctgtagaaatgtatattgtggcattcactttatatcttagagagttcaatttgtacgttaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="79784" stop="84870"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80084" g_stop="80375" g_length="292"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="292" r_length="292" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="80376" i_stop="81258" i_length="883">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81259" g_stop="81370" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="293" r_stop="404" r_length="112" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81371" i_stop="81976" i_length="606">
            <donor d_prob="0.191" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="81977" g_stop="82151" g_length="175"/>
          <reference_exon_boundary r_type="cDNA" r_start="405" r_stop="579" r_length="175" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="82152" i_stop="82347" i_length="196">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="82348" g_stop="82516" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="580" r_stop="748" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="82517" i_stop="82684" i_length="168">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.957" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="82685" g_stop="82909" g_length="225"/>
          <reference_exon_boundary r_type="cDNA" r_start="749" r_stop="973" r_length="225" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="82910" i_stop="83095" i_length="186">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="83096" g_stop="83371" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="974" r_stop="1249" r_length="276" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="83372" i_stop="83688" i_length="317">
            <donor d_prob="0.911" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="83689" g_stop="83967" g_length="279"/>
          <reference_exon_boundary r_type="cDNA" r_start="1250" r_stop="1528" r_length="279" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="83968" i_stop="84125" i_length="158">
            <donor d_prob="0.935" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="84126" g_stop="84570" g_length="445"/>
          <reference_exon_boundary r_type="cDNA" r_start="1529" r_stop="1972" r_length="444" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1973" polyA_stop="1986"/>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-E746114" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1973</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E746114" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80084" e_stop="80375"/>
          <exon e_start="81259" e_stop="81370"/>
          <exon e_start="81977" e_stop="82151"/>
          <exon e_start="82348" e_stop="82516"/>
          <exon e_start="82685" e_stop="82909"/>
          <exon e_start="83096" e_stop="83371"/>
          <exon e_start="83689" e_stop="83967"/>
          <exon e_start="84126" e_stop="84570"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACCAAATCTTTGCCAAATACACAATTTGATCTTATTCAGAGCGAGAAAATGGTGAATTTCATGATGGATAAGTATATTGTTCCCAGTTTTGTTGTTTCTCTATTGGGGTTCCTTCTTCTTTATGTTTTGCGACCAAGAACCCCCAATTATAAGAAAATGGATCTTAAATCTACCCGAAAATGTGAAACCCACAACGTAATTTCTAGAAAATTGGAGAAAGGGACCGATGCCGATGTTATAATTGTTGGAGCTGGGGTTGCTGGTGCTGCTCTTGCTCATACCCTTGCTAAGGTCTATTCCCAATTGCTTTCTAATTTACGGTTTTCATATTTCTAAAAGTCCCTTTGAAAGAAATGAAAATTTTCTTATCGGCAAGGTCATAATATTGGAATGGAAGGAAGCATGATGAAAAAATTGTATTTGGATACGGAAAATTCCTCTTACTATTATTATGTTTTCCTCACTGTTTTCTGTTTCTTTATACCTGAAATTGCTGCACTTGAGCCGATTGTCTCTTCGAAACAATCTCTCTGTATTAGGTAATGGTAAGGTCCTATGTACACCCTACCCTCGCCAGATCCCACTTGTGGGATTTCATCATTATGTTGTTCTTGTTGGATATGCAAAATCCATGAAAAAAAATCTAAACTTTTAGCTCCCCTCCAAGAGGTCTTTAGAATATGAATTATTTGCATGTATGATACTAGTTCCTTTACTGGGCACTTTATCTTATCAAGAGTTAATTGGACCAACTTTTAGAAATAAATTGTAGATAAATTCATTTTTCCTTTAATGAAAATTGAAATGACCGGAAACCATAGGGAAAGTACTATAAGTTGCAATTCTTCTCGTATCAAAATGATAAAAGAAGACGATCTAATGATGTGGTCTCAATTTCACATAGTTTGAAACTTGGGAAGGGACATAGGCTAAGCATTTCGAGAAGAGGGAGTAGACTATTTTGTTTAATGCAACATACAGGTGCTGTTAATATTCTTATCTTGATGGTAAGTTGTGATCTGTAATGGCTTGCCTTGTCATGGAAAATTTGGTTTTTGATTCCTAACACTTGTGTCCACGAGCAGGAAACAAGAAAATGTTTGTCTAGTGACTTTTACCAATTGTCCTGATCCCCCTTTAGCATCTAAACATTTGTTTTTTGCCACTGCTGCAGGAAGGACGAAATGTTCACGTCATCGAAAGGGATTTGACAGAGCCGGACCGGATTGTTGGCGAATTGCTTCAGCCTGGGGGTTATCTTAAATTGATTGAGTTGGGCATTGAAGGTTTGTCTAAAAAAAAGAAAAAAAAAACAAAATCAAACAAGCATAAGAGCTTACAATTGATCATTTTGTGATAGAGCTGGTAGGCACAAGATATACTCCCTCCGTTCACTTTATTTGTCCACCATACAAAAAACGAATTTTCACTTTTGCTTGTTACTTTTAGCATATCAATAGAAGTACATATTTTTTTCATGTTTTGTCCTCAACATGTATTACTTATTCTCAAAACATTTCCCTAGACCTAAGACTATACATCTATTCATATGGGTATTTTGGCAAAAGTTACTCATATTAACCATTGTTTCTAAAGAGCGTGCAAAGACCAAAGTGGACAATTAAAAGTGAACGGTGGGAGTATTTTACTATAGTATTTGAAATAAGTTGTAGTTTTAACTTGGGTTGCATGGACTCTTCACTTTCAATGCCGCACCCGTGTTGGATTCTCTAAAATACGCTACTTTTGGAAAATGCGACACACCCATTGATATTTTTGAAGAGTCCAAGCTACGTAGTTTTTAACTTGATTAGGATATAGAATTCACTTTTCGTTGTACTATTCTAGGTTTGCGTAATTTTGTGCTCTTGACGTTTGCCATTGTAATGCAGATTGTGTTGAGGATATTGATGCCCAGCGGGTGGTTGGATATGCTCTTTTCAAGGATGGAAAGAGCACAAATGTTTCCTATCCCTTGAAAAACTTCCATTCGGATGTGGCTGGGAGAAGCTTTCACAATGGGCGCTTCATACAGAAGATGAGAGAAAAAGCAGCTACTCTTCCCAAGTAAGCTTACCCATGCAGTATTATTTATTAGAACTGTTTTCGACACATCATATTAATCTTTCCTTATTAATAAAAAGAACTGTCTAGACACATTTCATGCTTTTAGTAATTGATACAATCATGTAATTGTAATTATCCTTTTGCTTATCATAGTTGCAAATAATCAATTGACTGGTTTTTATTAAATTATGTACAGTGTACGATTGGAACAAGGCACCGTAACATCCCTGATTGAAGAAAATGGATCCATTAAGGGTGTTCAGTACAAAACTAAGGCTGGCCAAGAACTTAAAGCACATGCTCCTCTTACAGTAGTTTGTGATGGGTGCTTCTCAAACTTGCGACGCTCGCTTTGTGACCCTAAGGTGAAGTTAATACCACTAAACATGTCAGTTGATTTGTTTCTGTAGTGTCATATGCACACATCAGGTCAAGTAAAACCTTCATATGCCTGGTGATATATGTTACCTGCACCGAGTTTGGAAAATTTAGATCTTGAAACTTATTGTAAGTGCGAGTATTGACATGTGCAGGTTGATGTTCCCTCTTGCTTTGTTGGTCTGGTATTGGAATTGGAGAATGATCGACTTCCATACCCAAACCATGGGCATGTTATTCTGGCAGATCCTTCTCCCATCTTATTTTATCCTATCAGTAGCACGGAAATTCGCTGCTTGGTCGATGTACCTGGTCAAAAGCTTCCTTCTCTTGCTAATGGTGATATGGCAAATTATTTGAAAACTATGGTAGCTCCCCAGGTACGTACAGTTTCCCTGCATGGTACTATTTTTATTTTTCTTAACTTTAGAATATAGTCATACACACAGCCAGTATAAAAAGTCTGTCCTTGTTTTTTCTACCTCACATACAATTGCCTGTTCCTAAAGATAGCTATTTGGTTCCTCCCAATGTGCCACCATGATGGTATCTTTACATTTTTTCAGGTACCACCTGAGCTACGTGATGCGTTTCTATCTGCAATTGATAAGGGGCATATTAAAACTATGCCAAACAGGAGCATGCCAGCTGCTCCCTATCCTACACCTGGAGCTCTGTTGCTAGGCGATTCTTTCAACATGCGCCATCCATTAACTGGTGGGGGAATGACTGTTGCGCTTTCAGACATTGCAGTATTAAGGAATCTTCTTATGCCATTGCAAGACCTGAATGACGCAGATGAGTTGTGTAAATATCTGGAGTCATTTTATACTTTGCGCAAGGTAAAGCTAAAACTGTTGTCTGGATAACACTATCATCGGTTGAATGATTTGCAATATGTGTTGTGGCTTATTTAAAAAAATATTTTATTTCAGCTTTTTGATCAAGTGTAGGGAGAACCTTCTTTCTAGCAATTTGACGTGGCATATGATGTCTTTTATCTCTACATAAAAATCATACGTTATTCGAAGCAGTTTTAATGTCTAAAACTGCATCACTTTTTTTAGTGCTATTCCCTCTAAAAGAATACAAACTAACAGAACTGGATTTCTGACTTTATTAGCCTGTTACTTATTCTTGTATTGGTCTCTGTTTTCAGCCAGTGGCTTCCACCATAAATACTTTGGCTGGAGCTCTGTATAAGGTGTTCTGTGCTTCTCCTGATCAAGCGAGGAGGGAGATGCGAGATGCGTGTTTTGACTATTTGAGCCTTGGAGGCACTTGTTCAACTGGACCTGTAGCTCTACTCTCTGGTCTTGATCCTAATCCAATGAGCTTGGTGCTCCATTTCTTTGCAGTGGCCGTTTATGGAGTTGGTCGTTTACTTGTACCTTTTCCTTCTCCAAAGAAGTTGTGGATCGGAGCTAAATTAATATTGGTATGTACCTTAAATGTAGTATTCAAACTGTCTTCGTTGACTCTGAGCATGTGTGTGTTATATATTGAGCTACTTTCCAGTTGAAATTCCTACATACTCGTTCACCTTGTTTGAAAGTCTTGACCATTTTGGCATGCATGCTCTTTTTTTTTGTTCAGTCTGCATCAGGCATCATATTTCCCATCATAAAGGCAGAAGGGATCCGGCAAATGTTCTTTCCAACAACAATACCAGCATATCACAGAGCTCCTCCCGTGAAGACGGAGTCAGATTAAGCAGAAAATTTGTTGAAGTTTTGTTCCATGAATAGCATTAACATTTTTGCAGTTCCTTTCTCGAAGCACGAAATGTAAGTTCCACTCTCCCCTCACCCCAAACCCTACAAATAGAATAAGAATGACGACGAAACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTGAAATCTACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTTAAATCTAGTCAGACTCCCTACTCTGTAGAAATGTATATTGTGGCATTCACTTTATATCTTAGAGAGTTCAATTTGTACGTCA</genome_strand>
        <mrna_strand>GACCAAATCTTTGCCAAATACACAATTTGATCTTATTCAGAGCGAGAAAATGGTGAATTTCATGATGGATAAGTATATTGTTCCCAGTTTTGTTGTTTCTCTATTGGGGTTCCTTCTTCTTTATGTTTTGCGACCAAGAACCCCCAATTATAAGAAAATGGATCTTAAATCTACCCGAAAATGTGAAACCCACAACGTAATTTCTAGAAAATTGGAGAAAGGGACCGATGCCGATGTTATAATTGTTGGAGCTGGGGTTGCTGGTGCTGCTCTTGCTCATACCCTTGCTAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGACGAAATGTTCACGTCATCGAAAGGGATTTGACAGAGCCGGACCGGATTGTTGGCGAATTGCTTCAGCCTGGGGGTTATCTTAAATTGATTGAGTTGGGCATTGAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTGTTGAGGATATTGATGCCCAGCGGGTGGTTGGATATGCTCTTTTCAAGGATGGAAAGAGCACAAATGTTTCCTATCCCTTGAAAAACTTCCATTCGGATGTGGCTGGGAGAAGCTTTCACAATGGGCGCTTCATACAGAAGATGAGAGAAAAAGCAGCTACTCTTCCCAA....................................................................................................................................................................................................TGTACGATTGGAACAAGGCACCGTAACATCCCTGATTGAAGAAAATGGATCCATTAAGGGTGTTCAGTACAAAACTAAGGCTGGCCAAGAACTTAAAGCACATGCTCCTCTTACAGTAGTTTGTGATGGGTGCTTCTCAAACTTGCGACGCTCGCTTTGTGACCCTAAG........................................................................................................................................................................GTTGATGTTCCCTCTTGCTTTGTTGGTCTGGTATTGGAATTGGAGAATGATCGACTTCCATACCCAAACCATGGGCATGTTATTCTGGCAGATCCTTCTCCCATCTTATTTTATCCTATCAGTAGCACGGAAATTCGCTGCTTGGTCGATGTACCTGGTCAAAAGCTTCCTTCTCTTGCTAATGGTGATATGGCAAATTATTTGAAAACTATGGTAGCTCCCCAG..........................................................................................................................................................................................GTACCACCTGAGCTACGTGATGCGTTTCTATCTGCAATTGATAAGGGGCATATTAAAACTATGCCAAACAGGAGCATGCCAGCTGCTCCCTATCCTACACCTGGAGCTCTGTTGCTAGGCGATTCTTTCAACATGCGCCATCCATTAACTGGTGGGGGAATGACTGTTGCGCTTTCAGACATTGCAGTATTAAGGAATCTTCTTATGCCATTGCAAGACCTGAATGACGCAGATGAGTTGTGTAAATATCTGGAGTCATTTTATACTTTGCGCAAG.............................................................................................................................................................................................................................................................................................................................CCAGTGGCTTCCACCATAAATACTTTGGCTGGAGCTCTGTATAAGGTGTTCTGTGCTTCTCCTGATCAAGCGAGGAGGGAGATGCGAGATGCGTGTTTTGACTATTTGAGCCTTGGAGGCACTTGTTCAACTGGACCTGTAGCTCTACTCTCTGGTCTTGATCCTAATCCAATGAGCTTGGTGCTCCATTTCTTTGCAGTGGCCGTTTATGGAGTTGGTCGTTTACTTGTACCTTTTCCTTCTCCAAAGAAGTTGTGGATCGGAGCTAAATTAATATTG..............................................................................................................................................................TCTGCATCAGGCATCATATTTCCCATCATAAAGGCAGAAGGGATCCGGCAAATGTTCTTTCCAACAACAATACCAGCATATCACAGAGCTCCTCCCGTGAAGACGGAGTCAGATTAAGCAGAAAATTTGTTGAAGTTTTGTTCCATGAATAGCATTAACATTTTTGCAGTTCCTTTCTCGAAGCACGAAATGTAAGTTCCACTCTCCCCTCACCCCAAACCCTAC-AATAGAATAAGAATGACGACGAAACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTGAAATCTACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTTAAATCTAGTCAGACTCCCTACTCTGTAGAAATGTATATTGTGGCATTCACTTTATATCTTAGAGAGTTCAATTTGTACGTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E727571" ref_strand="+" ref_description="SGN-E727571 [LA15AD04]">
      <seq>tgtgttgaggatattgatgcccagcgggtggttggatatgctcttttcaaggatggaaagagcacaaatgtttcctatcccttgaaaaacttccattcggatgtggctgggagaagctttcacaatgggcgcttcatacagaagatgagagaaaaagcagctactcttcccaatgtacgattggaacaaggcaccgtaacatccctgattgaagaaaatggatccattaagggtgttcagtacaaaactaaggctggccaagaacttaaagcacatgctcctcttacagtagtttgtgatgggtgcttctcaaacttgcgacgctcgctttgtgaccctaaggttgatgttccctcttgctttgttggtctggtattggaattggagaatgatcgacttccatacccaaaccatgggcatgttattctggcagatccttctcccatcttattttatcctatcagtagcacggaaattcgctgcttggtcgatgtacctggtcaaaagcttccttctcttgctaatggtgatatggcaaattatttgaaaactatggtagctccccaggtaccacctgagctacgtgatgcgtttctatctgcaattgataaggggcatattaaaactatgccaaacaggagcatgccagctgctccctatcctacacctggagctctgttgctaggcgattctttcaacatgcgccatccattaactggtgggggaatgactgttgcgctttcagacattgcagtattaaagaatcttcttatgccattgcnagacctgaatgacgcagatgagttgtgtaaatatctggagtcattttatactttgcgcaagccagtggcttccaccataaatactt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="81679" stop="84013"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81979" g_stop="82151" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="173" r_length="173" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82152" i_stop="82347" i_length="196">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82348" g_stop="82516" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="174" r_stop="342" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="82517" i_stop="82684" i_length="168">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.957" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="82685" g_stop="82909" g_length="225"/>
          <reference_exon_boundary r_type="cDNA" r_start="343" r_stop="567" r_length="225" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="82910" i_stop="83095" i_length="186">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="83096" g_stop="83371" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="568" r_stop="843" r_length="276" r_score="0.993"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="83372" i_stop="83688" i_length="317">
            <donor d_prob="0.911" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="83689" g_stop="83713" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="844" r_stop="868" r_length="25" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-E727571" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>868</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E727571" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81979" e_stop="82151"/>
          <exon e_start="82348" e_stop="82516"/>
          <exon e_start="82685" e_stop="82909"/>
          <exon e_start="83096" e_stop="83371"/>
          <exon e_start="83689" e_stop="83713"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTGTTGAGGATATTGATGCCCAGCGGGTGGTTGGATATGCTCTTTTCAAGGATGGAAAGAGCACAAATGTTTCCTATCCCTTGAAAAACTTCCATTCGGATGTGGCTGGGAGAAGCTTTCACAATGGGCGCTTCATACAGAAGATGAGAGAAAAAGCAGCTACTCTTCCCAAGTAAGCTTACCCATGCAGTATTATTTATTAGAACTGTTTTCGACACATCATATTAATCTTTCCTTATTAATAAAAAGAACTGTCTAGACACATTTCATGCTTTTAGTAATTGATACAATCATGTAATTGTAATTATCCTTTTGCTTATCATAGTTGCAAATAATCAATTGACTGGTTTTTATTAAATTATGTACAGTGTACGATTGGAACAAGGCACCGTAACATCCCTGATTGAAGAAAATGGATCCATTAAGGGTGTTCAGTACAAAACTAAGGCTGGCCAAGAACTTAAAGCACATGCTCCTCTTACAGTAGTTTGTGATGGGTGCTTCTCAAACTTGCGACGCTCGCTTTGTGACCCTAAGGTGAAGTTAATACCACTAAACATGTCAGTTGATTTGTTTCTGTAGTGTCATATGCACACATCAGGTCAAGTAAAACCTTCATATGCCTGGTGATATATGTTACCTGCACCGAGTTTGGAAAATTTAGATCTTGAAACTTATTGTAAGTGCGAGTATTGACATGTGCAGGTTGATGTTCCCTCTTGCTTTGTTGGTCTGGTATTGGAATTGGAGAATGATCGACTTCCATACCCAAACCATGGGCATGTTATTCTGGCAGATCCTTCTCCCATCTTATTTTATCCTATCAGTAGCACGGAAATTCGCTGCTTGGTCGATGTACCTGGTCAAAAGCTTCCTTCTCTTGCTAATGGTGATATGGCAAATTATTTGAAAACTATGGTAGCTCCCCAGGTACGTACAGTTTCCCTGCATGGTACTATTTTTATTTTTCTTAACTTTAGAATATAGTCATACACACAGCCAGTATAAAAAGTCTGTCCTTGTTTTTTCTACCTCACATACAATTGCCTGTTCCTAAAGATAGCTATTTGGTTCCTCCCAATGTGCCACCATGATGGTATCTTTACATTTTTTCAGGTACCACCTGAGCTACGTGATGCGTTTCTATCTGCAATTGATAAGGGGCATATTAAAACTATGCCAAACAGGAGCATGCCAGCTGCTCCCTATCCTACACCTGGAGCTCTGTTGCTAGGCGATTCTTTCAACATGCGCCATCCATTAACTGGTGGGGGAATGACTGTTGCGCTTTCAGACATTGCAGTATTAAGGAATCTTCTTATGCCATTGCAAGACCTGAATGACGCAGATGAGTTGTGTAAATATCTGGAGTCATTTTATACTTTGCGCAAGGTAAAGCTAAAACTGTTGTCTGGATAACACTATCATCGGTTGAATGATTTGCAATATGTGTTGTGGCTTATTTAAAAAAATATTTTATTTCAGCTTTTTGATCAAGTGTAGGGAGAACCTTCTTTCTAGCAATTTGACGTGGCATATGATGTCTTTTATCTCTACATAAAAATCATACGTTATTCGAAGCAGTTTTAATGTCTAAAACTGCATCACTTTTTTTAGTGCTATTCCCTCTAAAAGAATACAAACTAACAGAACTGGATTTCTGACTTTATTAGCCTGTTACTTATTCTTGTATTGGTCTCTGTTTTCAGCCAGTGGCTTCCACCATAAATACTT</genome_strand>
        <mrna_strand>TGTGTTGAGGATATTGATGCCCAGCGGGTGGTTGGATATGCTCTTTTCAAGGATGGAAAGAGCACAAATGTTTCCTATCCCTTGAAAAACTTCCATTCGGATGTGGCTGGGAGAAGCTTTCACAATGGGCGCTTCATACAGAAGATGAGAGAAAAAGCAGCTACTCTTCCCAA....................................................................................................................................................................................................TGTACGATTGGAACAAGGCACCGTAACATCCCTGATTGAAGAAAATGGATCCATTAAGGGTGTTCAGTACAAAACTAAGGCTGGCCAAGAACTTAAAGCACATGCTCCTCTTACAGTAGTTTGTGATGGGTGCTTCTCAAACTTGCGACGCTCGCTTTGTGACCCTAAG........................................................................................................................................................................GTTGATGTTCCCTCTTGCTTTGTTGGTCTGGTATTGGAATTGGAGAATGATCGACTTCCATACCCAAACCATGGGCATGTTATTCTGGCAGATCCTTCTCCCATCTTATTTTATCCTATCAGTAGCACGGAAATTCGCTGCTTGGTCGATGTACCTGGTCAAAAGCTTCCTTCTCTTGCTAATGGTGATATGGCAAATTATTTGAAAACTATGGTAGCTCCCCAG..........................................................................................................................................................................................GTACCACCTGAGCTACGTGATGCGTTTCTATCTGCAATTGATAAGGGGCATATTAAAACTATGCCAAACAGGAGCATGCCAGCTGCTCCCTATCCTACACCTGGAGCTCTGTTGCTAGGCGATTCTTTCAACATGCGCCATCCATTAACTGGTGGGGGAATGACTGTTGCGCTTTCAGACATTGCAGTATTAAAGAATCTTCTTATGCCATTGCNAGACCTGAATGACGCAGATGAGTTGTGTAAATATCTGGAGTCATTTTATACTTTGCGCAAG.............................................................................................................................................................................................................................................................................................................................CCAGTGGCTTCCACCATAAATACTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E726085" ref_strand="+" ref_description="SGN-E726085 [LA10BB02]">
      <seq>tgtgttgaggatattgatgcccagcgggtggttggatatgctcttttcaaggatggaaagagcacaaatgtttcctatcccttgaaaaacttccattcggatgtggctgggagaagctttcacaatgggcgcttcatacagaagatgagagaaaaagcagctactcttcccaatgtacgattggaacaaggcaccgtaacatccctgattgaagaaaatggatccattaagggtgttcagtacaaaactaaggctggccaagaacttaaagcacatgctcctcttacagtagtttgtgatgggtgcttctcaaacttgcgacgctcgctttgtgaccctaaggttgatgttccctcttgctttgttggtctggtattggaattggagaatgatcgacttccatacccaaaccatgggcatgttattctggcagatccttctcccatcttattttatcctatcagtagcacggnaattcgctgcttggtcgatgtacctggtcaaaagcttccttctcttgctaatggtgatatgggcaattatttgaaaactatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="81679" stop="83197"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81979" g_stop="82151" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="173" r_length="173" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82152" i_stop="82347" i_length="196">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82348" g_stop="82516" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="174" r_stop="342" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="82517" i_stop="82684" i_length="168">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.957" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="82685" g_stop="82897" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="343" r_stop="555" r_length="213" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-E726085" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>555</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E726085" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81979" e_stop="82151"/>
          <exon e_start="82348" e_stop="82516"/>
          <exon e_start="82685" e_stop="82897"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTGTTGAGGATATTGATGCCCAGCGGGTGGTTGGATATGCTCTTTTCAAGGATGGAAAGAGCACAAATGTTTCCTATCCCTTGAAAAACTTCCATTCGGATGTGGCTGGGAGAAGCTTTCACAATGGGCGCTTCATACAGAAGATGAGAGAAAAAGCAGCTACTCTTCCCAAGTAAGCTTACCCATGCAGTATTATTTATTAGAACTGTTTTCGACACATCATATTAATCTTTCCTTATTAATAAAAAGAACTGTCTAGACACATTTCATGCTTTTAGTAATTGATACAATCATGTAATTGTAATTATCCTTTTGCTTATCATAGTTGCAAATAATCAATTGACTGGTTTTTATTAAATTATGTACAGTGTACGATTGGAACAAGGCACCGTAACATCCCTGATTGAAGAAAATGGATCCATTAAGGGTGTTCAGTACAAAACTAAGGCTGGCCAAGAACTTAAAGCACATGCTCCTCTTACAGTAGTTTGTGATGGGTGCTTCTCAAACTTGCGACGCTCGCTTTGTGACCCTAAGGTGAAGTTAATACCACTAAACATGTCAGTTGATTTGTTTCTGTAGTGTCATATGCACACATCAGGTCAAGTAAAACCTTCATATGCCTGGTGATATATGTTACCTGCACCGAGTTTGGAAAATTTAGATCTTGAAACTTATTGTAAGTGCGAGTATTGACATGTGCAGGTTGATGTTCCCTCTTGCTTTGTTGGTCTGGTATTGGAATTGGAGAATGATCGACTTCCATACCCAAACCATGGGCATGTTATTCTGGCAGATCCTTCTCCCATCTTATTTTATCCTATCAGTAGCACGGAAATTCGCTGCTTGGTCGATGTACCTGGTCAAAAGCTTCCTTCTCTTGCTAATGGTGATATGGCAAATTATTTGAAAACTATG</genome_strand>
        <mrna_strand>TGTGTTGAGGATATTGATGCCCAGCGGGTGGTTGGATATGCTCTTTTCAAGGATGGAAAGAGCACAAATGTTTCCTATCCCTTGAAAAACTTCCATTCGGATGTGGCTGGGAGAAGCTTTCACAATGGGCGCTTCATACAGAAGATGAGAGAAAAAGCAGCTACTCTTCCCAA....................................................................................................................................................................................................TGTACGATTGGAACAAGGCACCGTAACATCCCTGATTGAAGAAAATGGATCCATTAAGGGTGTTCAGTACAAAACTAAGGCTGGCCAAGAACTTAAAGCACATGCTCCTCTTACAGTAGTTTGTGATGGGTGCTTCTCAAACTTGCGACGCTCGCTTTGTGACCCTAAG........................................................................................................................................................................GTTGATGTTCCCTCTTGCTTTGTTGGTCTGGTATTGGAATTGGAGAATGATCGACTTCCATACCCAAACCATGGGCATGTTATTCTGGCAGATCCTTCTCCCATCTTATTTTATCCTATCAGTAGCACGGNAATTCGCTGCTTGGTCGATGTACCTGGTCAAAAGCTTCCTTCTCTTGCTAATGGTGATATGGGCAATTATTTGAAAACTATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E325177" ref_strand="+" ref_description="SGN-E325177 [cTOC-13-F12]">
      <seq>tgatgcccagcgggtggttggatatgctcttttcaaggatggaaagagcacaaatgtttcctatcccttgaaaaacttccattcggatgtggctgggagaagctttcacaatgggcgcttcataccagaagatgagagaaaaagcagctactcttcccaatgtacgattggaacaaggcaccgtaaccatccctgattgaagaaaatggatccattaagggtgttcagtacaaaactaaggctggccaagaacttaaagcacatgcctcctcttaccagtagtttgtgatgggtgccttctcaaacttgcgacgctcgctttgtgaccctaaggttgatgttccctcttgctttgttggtctggtattggaattggagaatgatcgacttccatacccaaaccatgggcatgttattctggcagatccttctcccatcttattttatcctatcagtagcacggaaattcgctgcttggtcgatgtacctggtcaaaagcttccttctcttgctaatggtgatatggcaaattatttgaaaacta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="81693" stop="83195"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81993" g_stop="82151" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="160" r_length="160" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82152" i_stop="82347" i_length="196">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.993" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82348" g_stop="82516" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="161" r_stop="333" r_length="173" r_score="0.953"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="82517" i_stop="82684" i_length="168">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.957" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="82685" g_stop="82895" g_length="211"/>
          <reference_exon_boundary r_type="cDNA" r_start="334" r_stop="544" r_length="211" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-E325177" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>539</cumulative_length_of_scored_exons>
        <coverage percentage="0.991" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E325177" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81993" e_stop="82151"/>
          <exon e_start="82348" e_stop="82516"/>
          <exon e_start="82685" e_stop="82895"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATGCCCAGCGGGTGGTTGGATATGCTCTTTTCAAGGATGGAAAGAGCACAAATGTTTCCTATCCCTTGAAAAACTTCCATTCGGATGTGGCTGGGAGAAGCTTTCACAATGGGCGCTTCATA-CAGAAGATGAGAGAAAAAGCAGCTACTCTTCCCAAGTAAGCTTACCCATGCAGTATTATTTATTAGAACTGTTTTCGACACATCATATTAATCTTTCCTTATTAATAAAAAGAACTGTCTAGACACATTTCATGCTTTTAGTAATTGATACAATCATGTAATTGTAATTATCCTTTTGCTTATCATAGTTGCAAATAATCAATTGACTGGTTTTTATTAAATTATGTACAGTGTACGATTGGAACAAGGCACCGTAA-CATCCCTGATTGAAGAAAATGGATCCATTAAGGGTGTTCAGTACAAAACTAAGGCTGGCCAAGAACTTAAAGCACATG-CTCCTCTTA-CAGTAGTTTGTGATGGGTG-CTTCTCAAACTTGCGACGCTCGCTTTGTGACCCTAAGGTGAAGTTAATACCACTAAACATGTCAGTTGATTTGTTTCTGTAGTGTCATATGCACACATCAGGTCAAGTAAAACCTTCATATGCCTGGTGATATATGTTACCTGCACCGAGTTTGGAAAATTTAGATCTTGAAACTTATTGTAAGTGCGAGTATTGACATGTGCAGGTTGATGTTCCCTCTTGCTTTGTTGGTCTGGTATTGGAATTGGAGAATGATCGACTTCCATACCCAAACCATGGGCATGTTATTCTGGCAGATCCTTCTCCCATCTTATTTTATCCTATCAGTAGCACGGAAATTCGCTGCTTGGTCGATGTACCTGGTCAAAAGCTTCCTTCTCTTGCTAATGGTGATATGGCAAATTATTTGAAAACTA</genome_strand>
        <mrna_strand>TGATGCCCAGCGGGTGGTTGGATATGCTCTTTTCAAGGATGGAAAGAGCACAAATGTTTCCTATCCCTTGAAAAACTTCCATTCGGATGTGGCTGGGAGAAGCTTTCACAATGGGCGCTTCATACCAGAAGATGAGAGAAAAAGCAGCTACTCTTCCCAA....................................................................................................................................................................................................TGTACGATTGGAACAAGGCACCGTAACCATCCCTGATTGAAGAAAATGGATCCATTAAGGGTGTTCAGTACAAAACTAAGGCTGGCCAAGAACTTAAAGCACATGCCTCCTCTTACCAGTAGTTTGTGATGGGTGCCTTCTCAAACTTGCGACGCTCGCTTTGTGACCCTAAG........................................................................................................................................................................GTTGATGTTCCCTCTTGCTTTGTTGGTCTGGTATTGGAATTGGAGAATGATCGACTTCCATACCCAAACCATGGGCATGTTATTCTGGCAGATCCTTCTCCCATCTTATTTTATCCTATCAGTAGCACGGAAATTCGCTGCTTGGTCGATGTACCTGGTCAAAAGCTTCCTTCTCTTGCTAATGGTGATATGGCAAATTATTTGAAAACTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E698362" ref_strand="+" ref_description="SGN-E698362 [FA06AC07]">
      <seq>cccttttaatgtctcctatcccttgacgaacttccattccgatgtggctgggagaagctttcacaatgggcgcttcataccgaagatgagagaaaaagcagctactcttcccaatgtacgattggaacaaggcaccgtaacatccctgattgaagaaaatggatccattaagggtgttccgtacaaaactaaggctggccaagaacttcaagcacatgctcctcttacagtagtttgtgatgggtgcttctcaaacttgcgacgctcgctttgtgaccctaaggttgatgttccctcttgctttgttggtctggtattggaattggagaatgatcgacttccatacccaaaccatgggcatgttattctggcagatccttctcccatcttattttatcctatcagcagcacggaaattcgctgcttggtcgatgtacctggtcacaagcttccttctcttgatcatggcgatatggcaaattatttgaccactatggtacctccccaagtaccacctgagctacgtgatgcgtttctatctgctattgataaggggcatattaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="81745" stop="83451"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82038" g_stop="82151" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="114" r_length="114" r_score="0.895"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82152" i_stop="82347" i_length="196">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82348" g_stop="82516" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="115" r_stop="283" r_length="169" r_score="0.988"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="82517" i_stop="82684" i_length="168">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.957" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="82685" g_stop="82909" g_length="225"/>
          <reference_exon_boundary r_type="cDNA" r_start="284" r_stop="508" r_length="225" r_score="0.960"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="82910" i_stop="83095" i_length="186">
            <donor d_prob="0.999" d_score="0.86"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="83096" g_stop="83151" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="509" r_stop="564" r_length="56" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-E698362" ref_strand="+">
        <total_alignment_score>0.957</total_alignment_score>
        <cumulative_length_of_scored_exons>564</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E698362" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82038" e_stop="82151"/>
          <exon e_start="82348" e_stop="82516"/>
          <exon e_start="82685" e_stop="82909"/>
          <exon e_start="83096" e_stop="83151"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGCACAAATGTTTCCTATCCCTTGAAAAACTTCCATTCGGATGTGGCTGGGAGAAGCTTTCACAATGGGCGCTTCATACAGAAGATGAGAGAAAAAGCAGCTACTCTTCCCAAGTAAGCTTACCCATGCAGTATTATTTATTAGAACTGTTTTCGACACATCATATTAATCTTTCCTTATTAATAAAAAGAACTGTCTAGACACATTTCATGCTTTTAGTAATTGATACAATCATGTAATTGTAATTATCCTTTTGCTTATCATAGTTGCAAATAATCAATTGACTGGTTTTTATTAAATTATGTACAGTGTACGATTGGAACAAGGCACCGTAACATCCCTGATTGAAGAAAATGGATCCATTAAGGGTGTTCAGTACAAAACTAAGGCTGGCCAAGAACTTAAAGCACATGCTCCTCTTACAGTAGTTTGTGATGGGTGCTTCTCAAACTTGCGACGCTCGCTTTGTGACCCTAAGGTGAAGTTAATACCACTAAACATGTCAGTTGATTTGTTTCTGTAGTGTCATATGCACACATCAGGTCAAGTAAAACCTTCATATGCCTGGTGATATATGTTACCTGCACCGAGTTTGGAAAATTTAGATCTTGAAACTTATTGTAAGTGCGAGTATTGACATGTGCAGGTTGATGTTCCCTCTTGCTTTGTTGGTCTGGTATTGGAATTGGAGAATGATCGACTTCCATACCCAAACCATGGGCATGTTATTCTGGCAGATCCTTCTCCCATCTTATTTTATCCTATCAGTAGCACGGAAATTCGCTGCTTGGTCGATGTACCTGGTCAAAAGCTTCCTTCTCTTGCTAATGGTGATATGGCAAATTATTTGAAAACTATGGTAGCTCCCCAGGTACGTACAGTTTCCCTGCATGGTACTATTTTTATTTTTCTTAACTTTAGAATATAGTCATACACACAGCCAGTATAAAAAGTCTGTCCTTGTTTTTTCTACCTCACATACAATTGCCTGTTCCTAAAGATAGCTATTTGGTTCCTCCCAATGTGCCACCATGATGGTATCTTTACATTTTTTCAGGTACCACCTGAGCTACGTGATGCGTTTCTATCTGCAATTGATAAGGGGCATATTAA</genome_strand>
        <mrna_strand>CCCTTTTAATGTCTCCTATCCCTTGACGAACTTCCATTCCGATGTGGCTGGGAGAAGCTTTCACAATGGGCGCTTCATACCGAAGATGAGAGAAAAAGCAGCTACTCTTCCCAA....................................................................................................................................................................................................TGTACGATTGGAACAAGGCACCGTAACATCCCTGATTGAAGAAAATGGATCCATTAAGGGTGTTCCGTACAAAACTAAGGCTGGCCAAGAACTTCAAGCACATGCTCCTCTTACAGTAGTTTGTGATGGGTGCTTCTCAAACTTGCGACGCTCGCTTTGTGACCCTAAG........................................................................................................................................................................GTTGATGTTCCCTCTTGCTTTGTTGGTCTGGTATTGGAATTGGAGAATGATCGACTTCCATACCCAAACCATGGGCATGTTATTCTGGCAGATCCTTCTCCCATCTTATTTTATCCTATCAGCAGCACGGAAATTCGCTGCTTGGTCGATGTACCTGGTCACAAGCTTCCTTCTCTTGATCATGGCGATATGGCAAATTATTTGACCACTATGGTACCTCCCCAA..........................................................................................................................................................................................GTACCACCTGAGCTACGTGATGCGTTTCTATCTGCTATTGATAAGGGGCATATTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E263109" ref_strand="+" ref_description="SGN-E263109 [cLEG-59-N18]">
      <seq>acaaatgtttcctatcccttgaaaaacttccattcggatgtggctgggagaagctttcacaatgggcgcttcatacagaagatgagagaaaaagcagctactcttcccaatgtacgattggaacaaggcaccgtaacatccctgattgaagaaaatggatccattaagggtgttcagtacaaaactaaggctggccaagaacttaaagcacatgctcctcttacagtagtttgtgatgggtgcttctcaaacttgcgacgctcgctttgtgaccctaaggttgatgttccctcttgctttgttggtctggtattggaattggagaatgatcgacttccatacccaaaccatgggcatgttattctggcagatccttctcccatcttattttatcctatcagtagcacggaaattcgctgcttggtcgatgtacctggtcaaaagcttccttctcttgctaatggtgatatggcaaattatttgaaaactatggtagctccccaggtaccacctgagctacgtgatgcgtttctatctgcaattgataaggggcatattaaaactatgccaaacaggagcatgccagctgctccctatcctacacctggagctctgttgctaggcgattctttcaacatgcgccatcattaactggtgggggaatgactgttgcgctttcagacattgcagtattaaggaatcttcttatgccattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="81742" stop="83608"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82042" g_stop="82151" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="110" r_length="110" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82152" i_stop="82347" i_length="196">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82348" g_stop="82516" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="111" r_stop="279" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="82517" i_stop="82684" i_length="168">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.957" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="82685" g_stop="82909" g_length="225"/>
          <reference_exon_boundary r_type="cDNA" r_start="280" r_stop="504" r_length="225" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="82910" i_stop="83095" i_length="186">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="83096" g_stop="83308" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="505" r_stop="716" r_length="212" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-E263109" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>717</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E263109" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82042" e_stop="82151"/>
          <exon e_start="82348" e_stop="82516"/>
          <exon e_start="82685" e_stop="82909"/>
          <exon e_start="83096" e_stop="83308"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAAATGTTTCCTATCCCTTGAAAAACTTCCATTCGGATGTGGCTGGGAGAAGCTTTCACAATGGGCGCTTCATACAGAAGATGAGAGAAAAAGCAGCTACTCTTCCCAAGTAAGCTTACCCATGCAGTATTATTTATTAGAACTGTTTTCGACACATCATATTAATCTTTCCTTATTAATAAAAAGAACTGTCTAGACACATTTCATGCTTTTAGTAATTGATACAATCATGTAATTGTAATTATCCTTTTGCTTATCATAGTTGCAAATAATCAATTGACTGGTTTTTATTAAATTATGTACAGTGTACGATTGGAACAAGGCACCGTAACATCCCTGATTGAAGAAAATGGATCCATTAAGGGTGTTCAGTACAAAACTAAGGCTGGCCAAGAACTTAAAGCACATGCTCCTCTTACAGTAGTTTGTGATGGGTGCTTCTCAAACTTGCGACGCTCGCTTTGTGACCCTAAGGTGAAGTTAATACCACTAAACATGTCAGTTGATTTGTTTCTGTAGTGTCATATGCACACATCAGGTCAAGTAAAACCTTCATATGCCTGGTGATATATGTTACCTGCACCGAGTTTGGAAAATTTAGATCTTGAAACTTATTGTAAGTGCGAGTATTGACATGTGCAGGTTGATGTTCCCTCTTGCTTTGTTGGTCTGGTATTGGAATTGGAGAATGATCGACTTCCATACCCAAACCATGGGCATGTTATTCTGGCAGATCCTTCTCCCATCTTATTTTATCCTATCAGTAGCACGGAAATTCGCTGCTTGGTCGATGTACCTGGTCAAAAGCTTCCTTCTCTTGCTAATGGTGATATGGCAAATTATTTGAAAACTATGGTAGCTCCCCAGGTACGTACAGTTTCCCTGCATGGTACTATTTTTATTTTTCTTAACTTTAGAATATAGTCATACACACAGCCAGTATAAAAAGTCTGTCCTTGTTTTTTCTACCTCACATACAATTGCCTGTTCCTAAAGATAGCTATTTGGTTCCTCCCAATGTGCCACCATGATGGTATCTTTACATTTTTTCAGGTACCACCTGAGCTACGTGATGCGTTTCTATCTGCAATTGATAAGGGGCATATTAAAACTATGCCAAACAGGAGCATGCCAGCTGCTCCCTATCCTACACCTGGAGCTCTGTTGCTAGGCGATTCTTTCAACATGCGCCATCCATTAACTGGTGGGGGAATGACTGTTGCGCTTTCAGACATTGCAGTATTAAGGAATCTTCTTATGCCATTG</genome_strand>
        <mrna_strand>ACAAATGTTTCCTATCCCTTGAAAAACTTCCATTCGGATGTGGCTGGGAGAAGCTTTCACAATGGGCGCTTCATACAGAAGATGAGAGAAAAAGCAGCTACTCTTCCCAA....................................................................................................................................................................................................TGTACGATTGGAACAAGGCACCGTAACATCCCTGATTGAAGAAAATGGATCCATTAAGGGTGTTCAGTACAAAACTAAGGCTGGCCAAGAACTTAAAGCACATGCTCCTCTTACAGTAGTTTGTGATGGGTGCTTCTCAAACTTGCGACGCTCGCTTTGTGACCCTAAG........................................................................................................................................................................GTTGATGTTCCCTCTTGCTTTGTTGGTCTGGTATTGGAATTGGAGAATGATCGACTTCCATACCCAAACCATGGGCATGTTATTCTGGCAGATCCTTCTCCCATCTTATTTTATCCTATCAGTAGCACGGAAATTCGCTGCTTGGTCGATGTACCTGGTCAAAAGCTTCCTTCTCTTGCTAATGGTGATATGGCAAATTATTTGAAAACTATGGTAGCTCCCCAG..........................................................................................................................................................................................GTACCACCTGAGCTACGTGATGCGTTTCTATCTGCAATTGATAAGGGGCATATTAAAACTATGCCAAACAGGAGCATGCCAGCTGCTCCCTATCCTACACCTGGAGCTCTGTTGCTAGGCGATTCTTTCAACATGCGCCAT-CATTAACTGGTGGGGGAATGACTGTTGCGCTTTCAGACATTGCAGTATTAAGGAATCTTCTTATGCCATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E256181" ref_strand="+" ref_description="SGN-E256181 [cLEG-37-C8]">
      <seq>caaatgtttcctatcccttgaaaatcttccattcggatgtggctgggagaaggggtcacaatgggcgcttcatacagaacatgagagaaaaagcagctactcttcccaatgtacgattggaacaaggcaccgtaacatccctgattgaagaaaatggatccattaagggtgttcagtacaaaactaaggctggccaagaacttaaagcacatgctcctcttacagtagtttgtgatgggtgcttctcaaacttgcgacgctcgctttgtgaccctaaggttgatgttccctcttgctttgttggtctggtattggaattggagaatgatcgacttccatacccaaaccatgggcatgttattctggcagatccttctcccatcttattttatcctatcagtagcacggaaattcgctgcttggtcgatgtacctggtcaaaagcttccttctcttgctaatggtgatatggcaaattatttgaaaactatggtagctccccaggtaccacctgagctacgtgatgcgtttctatctgcaattgataa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="81743" stop="83439"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82043" g_stop="82151" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="109" r_length="109" r_score="0.954"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82152" i_stop="82347" i_length="196">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82348" g_stop="82516" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="110" r_stop="278" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="82517" i_stop="82684" i_length="168">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.957" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="82685" g_stop="82909" g_length="225"/>
          <reference_exon_boundary r_type="cDNA" r_start="279" r_stop="503" r_length="225" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="82910" i_stop="83095" i_length="186">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="83096" g_stop="83139" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="504" r_stop="547" r_length="44" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-E256181" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>547</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E256181" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82043" e_stop="82151"/>
          <exon e_start="82348" e_stop="82516"/>
          <exon e_start="82685" e_stop="82909"/>
          <exon e_start="83096" e_stop="83139"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAATGTTTCCTATCCCTTGAAAAACTTCCATTCGGATGTGGCTGGGAGAAGCTTTCACAATGGGCGCTTCATACAGAAGATGAGAGAAAAAGCAGCTACTCTTCCCAAGTAAGCTTACCCATGCAGTATTATTTATTAGAACTGTTTTCGACACATCATATTAATCTTTCCTTATTAATAAAAAGAACTGTCTAGACACATTTCATGCTTTTAGTAATTGATACAATCATGTAATTGTAATTATCCTTTTGCTTATCATAGTTGCAAATAATCAATTGACTGGTTTTTATTAAATTATGTACAGTGTACGATTGGAACAAGGCACCGTAACATCCCTGATTGAAGAAAATGGATCCATTAAGGGTGTTCAGTACAAAACTAAGGCTGGCCAAGAACTTAAAGCACATGCTCCTCTTACAGTAGTTTGTGATGGGTGCTTCTCAAACTTGCGACGCTCGCTTTGTGACCCTAAGGTGAAGTTAATACCACTAAACATGTCAGTTGATTTGTTTCTGTAGTGTCATATGCACACATCAGGTCAAGTAAAACCTTCATATGCCTGGTGATATATGTTACCTGCACCGAGTTTGGAAAATTTAGATCTTGAAACTTATTGTAAGTGCGAGTATTGACATGTGCAGGTTGATGTTCCCTCTTGCTTTGTTGGTCTGGTATTGGAATTGGAGAATGATCGACTTCCATACCCAAACCATGGGCATGTTATTCTGGCAGATCCTTCTCCCATCTTATTTTATCCTATCAGTAGCACGGAAATTCGCTGCTTGGTCGATGTACCTGGTCAAAAGCTTCCTTCTCTTGCTAATGGTGATATGGCAAATTATTTGAAAACTATGGTAGCTCCCCAGGTACGTACAGTTTCCCTGCATGGTACTATTTTTATTTTTCTTAACTTTAGAATATAGTCATACACACAGCCAGTATAAAAAGTCTGTCCTTGTTTTTTCTACCTCACATACAATTGCCTGTTCCTAAAGATAGCTATTTGGTTCCTCCCAATGTGCCACCATGATGGTATCTTTACATTTTTTCAGGTACCACCTGAGCTACGTGATGCGTTTCTATCTGCAATTGATAA</genome_strand>
        <mrna_strand>CAAATGTTTCCTATCCCTTGAAAATCTTCCATTCGGATGTGGCTGGGAGAAGGGGTCACAATGGGCGCTTCATACAGAACATGAGAGAAAAAGCAGCTACTCTTCCCAA....................................................................................................................................................................................................TGTACGATTGGAACAAGGCACCGTAACATCCCTGATTGAAGAAAATGGATCCATTAAGGGTGTTCAGTACAAAACTAAGGCTGGCCAAGAACTTAAAGCACATGCTCCTCTTACAGTAGTTTGTGATGGGTGCTTCTCAAACTTGCGACGCTCGCTTTGTGACCCTAAG........................................................................................................................................................................GTTGATGTTCCCTCTTGCTTTGTTGGTCTGGTATTGGAATTGGAGAATGATCGACTTCCATACCCAAACCATGGGCATGTTATTCTGGCAGATCCTTCTCCCATCTTATTTTATCCTATCAGTAGCACGGAAATTCGCTGCTTGGTCGATGTACCTGGTCAAAAGCTTCCTTCTCTTGCTAATGGTGATATGGCAAATTATTTGAAAACTATGGTAGCTCCCCAG..........................................................................................................................................................................................GTACCACCTGAGCTACGTGATGCGTTTCTATCTGCAATTGATAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E207981" ref_strand="+" ref_description="SGN-E207981 [cLEC-34-F14]">
      <seq>aaaacttccattcggatgtggctgggagaagctttcacaatgggcgcttcatacagaagatgagagaaaaagcagctactcttcccaatgtacgattggaacaaggcaccgtaacatccctgattgaagaaaatggatccattaagggtgttcagtacaaaactaaggctggccaagaacttaaagcacatgctcctcttacagtagtttgtgatgggtgcttctcaaacttgcgacgctcgctttgtgaccctaaggttgatgttccctcttgctttgttggtctggtattggaattggagaatgatcgacttccatacccaaaccatgggcatgttattctggcagatccttctcccatcttattttatcctatcagtagcacggaaattcgctgcttggtcgatgtacctggtcaaaagcttccttctcttgctaatggtgatatggcaaattatttgaaaactatggtagctccccaggtaccacctgagctacgtgatgcgtttctatctgcaattgataaggggcatattaaaactatgccaaacaggagcatgccagctgctccctatcctacacctggagctctgttgctaggcgattctttcaacatgcgccatccattaactggtgggggaatgactgttgcgctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="81764" stop="83569"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82064" g_stop="82151" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="88" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82152" i_stop="82347" i_length="196">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82348" g_stop="82516" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="89" r_stop="257" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="82517" i_stop="82684" i_length="168">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.957" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="82685" g_stop="82909" g_length="225"/>
          <reference_exon_boundary r_type="cDNA" r_start="258" r_stop="482" r_length="225" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="82910" i_stop="83095" i_length="186">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="83096" g_stop="83269" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="483" r_stop="656" r_length="174" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-E207981" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>656</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E207981" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82064" e_stop="82151"/>
          <exon e_start="82348" e_stop="82516"/>
          <exon e_start="82685" e_stop="82909"/>
          <exon e_start="83096" e_stop="83269"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAACTTCCATTCGGATGTGGCTGGGAGAAGCTTTCACAATGGGCGCTTCATACAGAAGATGAGAGAAAAAGCAGCTACTCTTCCCAAGTAAGCTTACCCATGCAGTATTATTTATTAGAACTGTTTTCGACACATCATATTAATCTTTCCTTATTAATAAAAAGAACTGTCTAGACACATTTCATGCTTTTAGTAATTGATACAATCATGTAATTGTAATTATCCTTTTGCTTATCATAGTTGCAAATAATCAATTGACTGGTTTTTATTAAATTATGTACAGTGTACGATTGGAACAAGGCACCGTAACATCCCTGATTGAAGAAAATGGATCCATTAAGGGTGTTCAGTACAAAACTAAGGCTGGCCAAGAACTTAAAGCACATGCTCCTCTTACAGTAGTTTGTGATGGGTGCTTCTCAAACTTGCGACGCTCGCTTTGTGACCCTAAGGTGAAGTTAATACCACTAAACATGTCAGTTGATTTGTTTCTGTAGTGTCATATGCACACATCAGGTCAAGTAAAACCTTCATATGCCTGGTGATATATGTTACCTGCACCGAGTTTGGAAAATTTAGATCTTGAAACTTATTGTAAGTGCGAGTATTGACATGTGCAGGTTGATGTTCCCTCTTGCTTTGTTGGTCTGGTATTGGAATTGGAGAATGATCGACTTCCATACCCAAACCATGGGCATGTTATTCTGGCAGATCCTTCTCCCATCTTATTTTATCCTATCAGTAGCACGGAAATTCGCTGCTTGGTCGATGTACCTGGTCAAAAGCTTCCTTCTCTTGCTAATGGTGATATGGCAAATTATTTGAAAACTATGGTAGCTCCCCAGGTACGTACAGTTTCCCTGCATGGTACTATTTTTATTTTTCTTAACTTTAGAATATAGTCATACACACAGCCAGTATAAAAAGTCTGTCCTTGTTTTTTCTACCTCACATACAATTGCCTGTTCCTAAAGATAGCTATTTGGTTCCTCCCAATGTGCCACCATGATGGTATCTTTACATTTTTTCAGGTACCACCTGAGCTACGTGATGCGTTTCTATCTGCAATTGATAAGGGGCATATTAAAACTATGCCAAACAGGAGCATGCCAGCTGCTCCCTATCCTACACCTGGAGCTCTGTTGCTAGGCGATTCTTTCAACATGCGCCATCCATTAACTGGTGGGGGAATGACTGTTGCGCTT</genome_strand>
        <mrna_strand>AAAACTTCCATTCGGATGTGGCTGGGAGAAGCTTTCACAATGGGCGCTTCATACAGAAGATGAGAGAAAAAGCAGCTACTCTTCCCAA....................................................................................................................................................................................................TGTACGATTGGAACAAGGCACCGTAACATCCCTGATTGAAGAAAATGGATCCATTAAGGGTGTTCAGTACAAAACTAAGGCTGGCCAAGAACTTAAAGCACATGCTCCTCTTACAGTAGTTTGTGATGGGTGCTTCTCAAACTTGCGACGCTCGCTTTGTGACCCTAAG........................................................................................................................................................................GTTGATGTTCCCTCTTGCTTTGTTGGTCTGGTATTGGAATTGGAGAATGATCGACTTCCATACCCAAACCATGGGCATGTTATTCTGGCAGATCCTTCTCCCATCTTATTTTATCCTATCAGTAGCACGGAAATTCGCTGCTTGGTCGATGTACCTGGTCAAAAGCTTCCTTCTCTTGCTAATGGTGATATGGCAAATTATTTGAAAACTATGGTAGCTCCCCAG..........................................................................................................................................................................................GTACCACCTGAGCTACGTGATGCGTTTCTATCTGCAATTGATAAGGGGCATATTAAAACTATGCCAAACAGGAGCATGCCAGCTGCTCCCTATCCTACACCTGGAGCTCTGTTGCTAGGCGATTCTTTCAACATGCGCCATCCATTAACTGGTGGGGGAATGACTGTTGCGCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E214511" ref_strand="+" ref_description="SGN-E214511 [cLEC-79-A21]">
      <seq>aaaacttccattcggatgtggctgggagaagctttcacaatgggcgcttcatacagaagatgagagaaaaagcagctactcttcccaatgtacgattggaacaaggcaccgtaacatccctgattgaagaaaatggatccattaagggtgttcagtacaaaactaaggctggccaagaacttaaagcacatgctcctcttacagtagtttgtgatgggtgcttctcaaacttgcgacgctcgctttgtgaccctaaggttgatgttccctcttgctttgttggtctggtattggaattggagaatgatcgacttccatacccaaaccatgggcatgttattctggcagatccttctcccatcttattttatcctatcagtagcacggaaattcgctgcttggtcgatgtacctggtcaaaagcttccttctcttgctaatggtgatatggcaaattatttgaaaactatggtagctccccaggtaccacctgagctacgtgatgcgtttctatctgcaattgataaggggcatattaaaactatgccaaacaggagcatgccagctgctccctatcctacacctggagctctgttgctaggcgattctttcacatgcgccatccattaactggtgggggaatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="81764" stop="83558"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82064" g_stop="82151" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="88" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82152" i_stop="82347" i_length="196">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82348" g_stop="82516" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="89" r_stop="257" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="82517" i_stop="82684" i_length="168">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.957" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="82685" g_stop="82909" g_length="225"/>
          <reference_exon_boundary r_type="cDNA" r_start="258" r_stop="482" r_length="225" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="82910" i_stop="83095" i_length="186">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="83096" g_stop="83258" g_length="163"/>
          <reference_exon_boundary r_type="cDNA" r_start="483" r_stop="644" r_length="162" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-E214511" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>645</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E214511" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82064" e_stop="82151"/>
          <exon e_start="82348" e_stop="82516"/>
          <exon e_start="82685" e_stop="82909"/>
          <exon e_start="83096" e_stop="83258"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAACTTCCATTCGGATGTGGCTGGGAGAAGCTTTCACAATGGGCGCTTCATACAGAAGATGAGAGAAAAAGCAGCTACTCTTCCCAAGTAAGCTTACCCATGCAGTATTATTTATTAGAACTGTTTTCGACACATCATATTAATCTTTCCTTATTAATAAAAAGAACTGTCTAGACACATTTCATGCTTTTAGTAATTGATACAATCATGTAATTGTAATTATCCTTTTGCTTATCATAGTTGCAAATAATCAATTGACTGGTTTTTATTAAATTATGTACAGTGTACGATTGGAACAAGGCACCGTAACATCCCTGATTGAAGAAAATGGATCCATTAAGGGTGTTCAGTACAAAACTAAGGCTGGCCAAGAACTTAAAGCACATGCTCCTCTTACAGTAGTTTGTGATGGGTGCTTCTCAAACTTGCGACGCTCGCTTTGTGACCCTAAGGTGAAGTTAATACCACTAAACATGTCAGTTGATTTGTTTCTGTAGTGTCATATGCACACATCAGGTCAAGTAAAACCTTCATATGCCTGGTGATATATGTTACCTGCACCGAGTTTGGAAAATTTAGATCTTGAAACTTATTGTAAGTGCGAGTATTGACATGTGCAGGTTGATGTTCCCTCTTGCTTTGTTGGTCTGGTATTGGAATTGGAGAATGATCGACTTCCATACCCAAACCATGGGCATGTTATTCTGGCAGATCCTTCTCCCATCTTATTTTATCCTATCAGTAGCACGGAAATTCGCTGCTTGGTCGATGTACCTGGTCAAAAGCTTCCTTCTCTTGCTAATGGTGATATGGCAAATTATTTGAAAACTATGGTAGCTCCCCAGGTACGTACAGTTTCCCTGCATGGTACTATTTTTATTTTTCTTAACTTTAGAATATAGTCATACACACAGCCAGTATAAAAAGTCTGTCCTTGTTTTTTCTACCTCACATACAATTGCCTGTTCCTAAAGATAGCTATTTGGTTCCTCCCAATGTGCCACCATGATGGTATCTTTACATTTTTTCAGGTACCACCTGAGCTACGTGATGCGTTTCTATCTGCAATTGATAAGGGGCATATTAAAACTATGCCAAACAGGAGCATGCCAGCTGCTCCCTATCCTACACCTGGAGCTCTGTTGCTAGGCGATTCTTTCAACATGCGCCATCCATTAACTGGTGGGGGAATGA</genome_strand>
        <mrna_strand>AAAACTTCCATTCGGATGTGGCTGGGAGAAGCTTTCACAATGGGCGCTTCATACAGAAGATGAGAGAAAAAGCAGCTACTCTTCCCAA....................................................................................................................................................................................................TGTACGATTGGAACAAGGCACCGTAACATCCCTGATTGAAGAAAATGGATCCATTAAGGGTGTTCAGTACAAAACTAAGGCTGGCCAAGAACTTAAAGCACATGCTCCTCTTACAGTAGTTTGTGATGGGTGCTTCTCAAACTTGCGACGCTCGCTTTGTGACCCTAAG........................................................................................................................................................................GTTGATGTTCCCTCTTGCTTTGTTGGTCTGGTATTGGAATTGGAGAATGATCGACTTCCATACCCAAACCATGGGCATGTTATTCTGGCAGATCCTTCTCCCATCTTATTTTATCCTATCAGTAGCACGGAAATTCGCTGCTTGGTCGATGTACCTGGTCAAAAGCTTCCTTCTCTTGCTAATGGTGATATGGCAAATTATTTGAAAACTATGGTAGCTCCCCAG..........................................................................................................................................................................................GTACCACCTGAGCTACGTGATGCGTTTCTATCTGCAATTGATAAGGGGCATATTAAAACTATGCCAAACAGGAGCATGCCAGCTGCTCCCTATCCTACACCTGGAGCTCTGTTGCTAGGCGATTCTTTC-ACATGCGCCATCCATTAACTGGTGGGGGAATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E308363" ref_strand="+" ref_description="SGN-E308363 [cLEY-25-D5]">
      <seq>tcttcttatgccattgctagacctgaatgacgcagatgagttgtgtaaatatctggagtcattttatactttgcgcaagccagtggcttccaccattaatactttggctggtgctctgtataaagagttctgagcttctcctgatcatgcgaggagggagatgcgagatgcgtgttttgactatttgagccttggagagcacttgttcaactggacctgtagctctactctctggtcttgatcctaatccaatgagcttggtgctccatttctttgcagaggccagtttatggagttggtcgtttacttgtaccttttccttctccaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="82993" stop="84235"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83293" g_stop="83371" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="79" r_length="79" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="83372" i_stop="83688" i_length="317">
            <donor d_prob="0.911" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="83689" g_stop="83935" g_length="247"/>
          <reference_exon_boundary r_type="cDNA" r_start="80" r_stop="328" r_length="249" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-E308363" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>326</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E308363" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83293" e_stop="83371"/>
          <exon e_start="83689" e_stop="83935"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTCTTATGCCATTGCAAGACCTGAATGACGCAGATGAGTTGTGTAAATATCTGGAGTCATTTTATACTTTGCGCAAGGTAAAGCTAAAACTGTTGTCTGGATAACACTATCATCGGTTGAATGATTTGCAATATGTGTTGTGGCTTATTTAAAAAAATATTTTATTTCAGCTTTTTGATCAAGTGTAGGGAGAACCTTCTTTCTAGCAATTTGACGTGGCATATGATGTCTTTTATCTCTACATAAAAATCATACGTTATTCGAAGCAGTTTTAATGTCTAAAACTGCATCACTTTTTTTAGTGCTATTCCCTCTAAAAGAATACAAACTAACAGAACTGGATTTCTGACTTTATTAGCCTGTTACTTATTCTTGTATTGGTCTCTGTTTTCAGCCAGTGGCTTCCACCATAAATACTTTGGCTGGAGCTCTGTATAAGGTGTTCTGTGCTTCTCCTGATCAAGCGAGGAGGGAGATGCGAGATGCGTGTTTTGACTATTTGAGCCTTGGAG-GCACTTGTTCAACTGGACCTGTAGCTCTACTCTCTGGTCTTGATCCTAATCCAATGAGCTTGGTGCTCCATTTCTTTGCAGTGGCC-GTTTATGGAGTTGGTCGTTTACTTGTACCTTTTCCTTCTCCAA</genome_strand>
        <mrna_strand>TCTTCTTATGCCATTGCTAGACCTGAATGACGCAGATGAGTTGTGTAAATATCTGGAGTCATTTTATACTTTGCGCAAG.............................................................................................................................................................................................................................................................................................................................CCAGTGGCTTCCACCATTAATACTTTGGCTGGTGCTCTGTATAAAGAGTTCTGAGCTTCTCCTGATCATGCGAGGAGGGAGATGCGAGATGCGTGTTTTGACTATTTGAGCCTTGGAGAGCACTTGTTCAACTGGACCTGTAGCTCTACTCTCTGGTCTTGATCCTAATCCAATGAGCTTGGTGCTCCATTTCTTTGCAGAGGCCAGTTTATGGAGTTGGTCGTTTACTTGTACCTTTTCCTTCTCCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E548792" ref_strand="+" ref_description="SGN-E548792 [TUS-64-H10](-)">
      <seq>tgcgagatgcgtgttttgactatttgagccttggaggcacttgttcaactggacctgtagctctactctctggtcttgatcctaatccaatgagcttggtgctccatttctttgcagtggccgtttatggagttggtcgtttacttgtaccttttccttctccaaagaagttgtggatcggagctaaattaatattgtctgcatcaggcatcatatttcccatcataaaggcagaagggatccggcaaatgttctttccaacaacaataccagcatatcacagagctcctcccgtgaagacggagtcagattaagcagaaaatttgttgaagttttgttccatgaatagcattaacatttttgcagttcctttctcgaagcacgaaatgtaagttccactctcccctcaccccaaaccctacaaatagaataagaatgacgacgaaaccttattgtaggcatattataccaaaaggaacttcaagtgtacgtattcattgaaatctaccttattgtaggcatattataccaaaaggaacttcaagtgtacgtattcatttaaaaaaaaaaaaaaaaaactcgaggggggccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="83471" stop="84791"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83771" g_stop="83967" g_length="197"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="197" r_length="197" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="83968" i_stop="84125" i_length="158">
            <donor d_prob="0.935" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="84126" g_stop="84490" g_length="365"/>
          <reference_exon_boundary r_type="cDNA" r_start="198" r_stop="562" r_length="365" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="563" polyA_stop="579"/>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-E548792" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>562</cumulative_length_of_scored_exons>
        <coverage percentage="0.949" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E548792" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83771" e_stop="83967"/>
          <exon e_start="84126" e_stop="84490"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCGAGATGCGTGTTTTGACTATTTGAGCCTTGGAGGCACTTGTTCAACTGGACCTGTAGCTCTACTCTCTGGTCTTGATCCTAATCCAATGAGCTTGGTGCTCCATTTCTTTGCAGTGGCCGTTTATGGAGTTGGTCGTTTACTTGTACCTTTTCCTTCTCCAAAGAAGTTGTGGATCGGAGCTAAATTAATATTGGTATGTACCTTAAATGTAGTATTCAAACTGTCTTCGTTGACTCTGAGCATGTGTGTGTTATATATTGAGCTACTTTCCAGTTGAAATTCCTACATACTCGTTCACCTTGTTTGAAAGTCTTGACCATTTTGGCATGCATGCTCTTTTTTTTTGTTCAGTCTGCATCAGGCATCATATTTCCCATCATAAAGGCAGAAGGGATCCGGCAAATGTTCTTTCCAACAACAATACCAGCATATCACAGAGCTCCTCCCGTGAAGACGGAGTCAGATTAAGCAGAAAATTTGTTGAAGTTTTGTTCCATGAATAGCATTAACATTTTTGCAGTTCCTTTCTCGAAGCACGAAATGTAAGTTCCACTCTCCCCTCACCCCAAACCCTACAAATAGAATAAGAATGACGACGAAACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTGAAATCTACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTTAA</genome_strand>
        <mrna_strand>TGCGAGATGCGTGTTTTGACTATTTGAGCCTTGGAGGCACTTGTTCAACTGGACCTGTAGCTCTACTCTCTGGTCTTGATCCTAATCCAATGAGCTTGGTGCTCCATTTCTTTGCAGTGGCCGTTTATGGAGTTGGTCGTTTACTTGTACCTTTTCCTTCTCCAAAGAAGTTGTGGATCGGAGCTAAATTAATATTG..............................................................................................................................................................TCTGCATCAGGCATCATATTTCCCATCATAAAGGCAGAAGGGATCCGGCAAATGTTCTTTCCAACAACAATACCAGCATATCACAGAGCTCCTCCCGTGAAGACGGAGTCAGATTAAGCAGAAAATTTGTTGAAGTTTTGTTCCATGAATAGCATTAACATTTTTGCAGTTCCTTTCTCGAAGCACGAAATGTAAGTTCCACTCTCCCCTCACCCCAAACCCTACAAATAGAATAAGAATGACGACGAAACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTGAAATCTACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E351126" ref_strand="+" ref_description="SGN-E351126 [cTOS-6-J4]">
      <seq>cacttgttcaactggacctgtagctctactctctggtcttgatcctaatccaatgagcttggtgctccatttctttgcagtggccgtttatggagttggtcgtttacttgtaccttttccttctccaaagaagttgtggatcggagctaaattaatattgtctgcatcaggcatcatatttcccatcataaaggcagaagggatccggcaaatgttctttccaacaacaataccagcatatcacagagctcctcccgtgaagacggagtcagattaagcagaaaatttgttgaagttttgttccatgaatagcattaacatttttgcagttcctttctcgaagcacgaaatgtaagttccactctcccctcaccccaaaccctacaaatagaataagaatgacgacgaaaccttattgtaggcatattataccaaaaggaacttcaagtgtacgtattcattgaaatctaccttattgtaggcatattataccaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="83508" stop="84766"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83808" g_stop="83967" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="160" r_length="160" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="83968" i_stop="84125" i_length="158">
            <donor d_prob="0.935" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="84126" g_stop="84468" g_length="343"/>
          <reference_exon_boundary r_type="cDNA" r_start="161" r_stop="503" r_length="343" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-E351126" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>503</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E351126" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83808" e_stop="83967"/>
          <exon e_start="84126" e_stop="84468"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACTTGTTCAACTGGACCTGTAGCTCTACTCTCTGGTCTTGATCCTAATCCAATGAGCTTGGTGCTCCATTTCTTTGCAGTGGCCGTTTATGGAGTTGGTCGTTTACTTGTACCTTTTCCTTCTCCAAAGAAGTTGTGGATCGGAGCTAAATTAATATTGGTATGTACCTTAAATGTAGTATTCAAACTGTCTTCGTTGACTCTGAGCATGTGTGTGTTATATATTGAGCTACTTTCCAGTTGAAATTCCTACATACTCGTTCACCTTGTTTGAAAGTCTTGACCATTTTGGCATGCATGCTCTTTTTTTTTGTTCAGTCTGCATCAGGCATCATATTTCCCATCATAAAGGCAGAAGGGATCCGGCAAATGTTCTTTCCAACAACAATACCAGCATATCACAGAGCTCCTCCCGTGAAGACGGAGTCAGATTAAGCAGAAAATTTGTTGAAGTTTTGTTCCATGAATAGCATTAACATTTTTGCAGTTCCTTTCTCGAAGCACGAAATGTAAGTTCCACTCTCCCCTCACCCCAAACCCTACAAATAGAATAAGAATGACGACGAAACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTGAAATCTACCTTATTGTAGGCATATTATACCAAAAGGAACT</genome_strand>
        <mrna_strand>CACTTGTTCAACTGGACCTGTAGCTCTACTCTCTGGTCTTGATCCTAATCCAATGAGCTTGGTGCTCCATTTCTTTGCAGTGGCCGTTTATGGAGTTGGTCGTTTACTTGTACCTTTTCCTTCTCCAAAGAAGTTGTGGATCGGAGCTAAATTAATATTG..............................................................................................................................................................TCTGCATCAGGCATCATATTTCCCATCATAAAGGCAGAAGGGATCCGGCAAATGTTCTTTCCAACAACAATACCAGCATATCACAGAGCTCCTCCCGTGAAGACGGAGTCAGATTAAGCAGAAAATTTGTTGAAGTTTTGTTCCATGAATAGCATTAACATTTTTGCAGTTCCTTTCTCGAAGCACGAAATGTAAGTTCCACTCTCCCCTCACCCCAAACCCTACAAATAGAATAAGAATGACGACGAAACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTGAAATCTACCTTATTGTAGGCATATTATACCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E357285" ref_strand="+" ref_description="SGN-E357285 [cTOS-23-I15]">
      <seq>cacttgttcaactggacctgtagctctactctctggtcttgatcctaatccaatgagcttggtgctccatttctttgcagtggccgtttatggagttggtcgtttacttgtaccttttccttctccaaagaagttgtggatcggagctaaattaatattgtctgcatcaggcatcatatttcccatcataaaggcagaagggatccggcaaatgttctttccaacaacaataccagcatatcacagagctcctcccgtgaagacggagtcagattaagcagaaaatttgttgaagttttgttccatgaatagcattaacatttttgcagttcctttctcgaagcacgaaatgtaagttccactctcccctcaccccaaaccctacaaatagaataagaatgacgacgaaaccttattgtaggcatattataccaaaaggaacttcaagtgtacgtattcattgaaatctaccttattgtaggcatattataccaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="83508" stop="84766"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83808" g_stop="83967" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="160" r_length="160" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="83968" i_stop="84125" i_length="158">
            <donor d_prob="0.935" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="84126" g_stop="84468" g_length="343"/>
          <reference_exon_boundary r_type="cDNA" r_start="161" r_stop="503" r_length="343" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-E357285" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>503</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E357285" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83808" e_stop="83967"/>
          <exon e_start="84126" e_stop="84468"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACTTGTTCAACTGGACCTGTAGCTCTACTCTCTGGTCTTGATCCTAATCCAATGAGCTTGGTGCTCCATTTCTTTGCAGTGGCCGTTTATGGAGTTGGTCGTTTACTTGTACCTTTTCCTTCTCCAAAGAAGTTGTGGATCGGAGCTAAATTAATATTGGTATGTACCTTAAATGTAGTATTCAAACTGTCTTCGTTGACTCTGAGCATGTGTGTGTTATATATTGAGCTACTTTCCAGTTGAAATTCCTACATACTCGTTCACCTTGTTTGAAAGTCTTGACCATTTTGGCATGCATGCTCTTTTTTTTTGTTCAGTCTGCATCAGGCATCATATTTCCCATCATAAAGGCAGAAGGGATCCGGCAAATGTTCTTTCCAACAACAATACCAGCATATCACAGAGCTCCTCCCGTGAAGACGGAGTCAGATTAAGCAGAAAATTTGTTGAAGTTTTGTTCCATGAATAGCATTAACATTTTTGCAGTTCCTTTCTCGAAGCACGAAATGTAAGTTCCACTCTCCCCTCACCCCAAACCCTACAAATAGAATAAGAATGACGACGAAACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTGAAATCTACCTTATTGTAGGCATATTATACCAAAAGGAACT</genome_strand>
        <mrna_strand>CACTTGTTCAACTGGACCTGTAGCTCTACTCTCTGGTCTTGATCCTAATCCAATGAGCTTGGTGCTCCATTTCTTTGCAGTGGCCGTTTATGGAGTTGGTCGTTTACTTGTACCTTTTCCTTCTCCAAAGAAGTTGTGGATCGGAGCTAAATTAATATTG..............................................................................................................................................................TCTGCATCAGGCATCATATTTCCCATCATAAAGGCAGAAGGGATCCGGCAAATGTTCTTTCCAACAACAATACCAGCATATCACAGAGCTCCTCCCGTGAAGACGGAGTCAGATTAAGCAGAAAATTTGTTGAAGTTTTGTTCCATGAATAGCATTAACATTTTTGCAGTTCCTTTCTCGAAGCACGAAATGTAAGTTCCACTCTCCCCTCACCCCAAACCCTACAAATAGAATAAGAATGACGACGAAACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTGAAATCTACCTTATTGTAGGCATATTATACCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E357496" ref_strand="+" ref_description="SGN-E357496 [cTOS-23-G16]">
      <seq>cacttgttcaactggacctgtagctctactctctggtcttgatcctaatccaatgagcttggtgctccatttctttgcagtggccgtttatggagttggtcgtttacttgtaccttttccttctccaaagaagttgtggatcggagctaaattaatattgtctgcatcaggcatcatatttcccatcataaaggcagaagggatccggcaaatgttctttccaacaacaataccagcatatcacagagctcctcccgtgaagacggagtcagattaagcagaaaatttgttgaagttttgttccatgaatagcattaacatttttgcagttcctttctcgaagcacgaaatgtaagttccactctcccctcaccccaaaccctacaaatagaataagaatgacgacgaaaccttattgtaggcatattataccaaaaggaacttcaagtgtacgtattcattgaaatctaccttattgtaggcatattataccaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="83508" stop="84766"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83808" g_stop="83967" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="160" r_length="160" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="83968" i_stop="84125" i_length="158">
            <donor d_prob="0.935" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="84126" g_stop="84468" g_length="343"/>
          <reference_exon_boundary r_type="cDNA" r_start="161" r_stop="503" r_length="343" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-E357496" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>503</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E357496" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83808" e_stop="83967"/>
          <exon e_start="84126" e_stop="84468"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACTTGTTCAACTGGACCTGTAGCTCTACTCTCTGGTCTTGATCCTAATCCAATGAGCTTGGTGCTCCATTTCTTTGCAGTGGCCGTTTATGGAGTTGGTCGTTTACTTGTACCTTTTCCTTCTCCAAAGAAGTTGTGGATCGGAGCTAAATTAATATTGGTATGTACCTTAAATGTAGTATTCAAACTGTCTTCGTTGACTCTGAGCATGTGTGTGTTATATATTGAGCTACTTTCCAGTTGAAATTCCTACATACTCGTTCACCTTGTTTGAAAGTCTTGACCATTTTGGCATGCATGCTCTTTTTTTTTGTTCAGTCTGCATCAGGCATCATATTTCCCATCATAAAGGCAGAAGGGATCCGGCAAATGTTCTTTCCAACAACAATACCAGCATATCACAGAGCTCCTCCCGTGAAGACGGAGTCAGATTAAGCAGAAAATTTGTTGAAGTTTTGTTCCATGAATAGCATTAACATTTTTGCAGTTCCTTTCTCGAAGCACGAAATGTAAGTTCCACTCTCCCCTCACCCCAAACCCTACAAATAGAATAAGAATGACGACGAAACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTGAAATCTACCTTATTGTAGGCATATTATACCAAAAGGAACT</genome_strand>
        <mrna_strand>CACTTGTTCAACTGGACCTGTAGCTCTACTCTCTGGTCTTGATCCTAATCCAATGAGCTTGGTGCTCCATTTCTTTGCAGTGGCCGTTTATGGAGTTGGTCGTTTACTTGTACCTTTTCCTTCTCCAAAGAAGTTGTGGATCGGAGCTAAATTAATATTG..............................................................................................................................................................TCTGCATCAGGCATCATATTTCCCATCATAAAGGCAGAAGGGATCCGGCAAATGTTCTTTCCAACAACAATACCAGCATATCACAGAGCTCCTCCCGTGAAGACGGAGTCAGATTAAGCAGAAAATTTGTTGAAGTTTTGTTCCATGAATAGCATTAACATTTTTGCAGTTCCTTTCTCGAAGCACGAAATGTAAGTTCCACTCTCCCCTCACCCCAAACCCTACAAATAGAATAAGAATGACGACGAAACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTGAAATCTACCTTATTGTAGGCATATTATACCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E357501" ref_strand="+" ref_description="SGN-E357501 [cTOS-23-I16]">
      <seq>cacttgttcaactggacctgtagctctactctctggtcttgatcctaatccaatgagcttggtgctccatttctttgcagtggccgtttatggagttggtcgtttacttgtaccttttccttctccaaagaagttgtggatcggagctaaattaatattgtctgcatcaggcatcatatttcccatcataaaggcagaagggatccggcaaatgttctttccaacaacaataccagcatatcacagagctcctcccgtgaagacggagtcagattaagcagaaaatttgttgaagttttgttccatgaatagcattaacatttttgcagttcctttctcgaagcacgaaatgtaagttccactctcccctcaccccaaaccctacaaatagaataagaatgacgacgaaaccttattgtaggcatattataccaaaaggaacttcaagtgtacgtattcattgaaatctaccttattgtaggcatattataccaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="83508" stop="84766"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83808" g_stop="83967" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="160" r_length="160" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="83968" i_stop="84125" i_length="158">
            <donor d_prob="0.935" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="84126" g_stop="84468" g_length="343"/>
          <reference_exon_boundary r_type="cDNA" r_start="161" r_stop="503" r_length="343" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-E357501" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>503</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E357501" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83808" e_stop="83967"/>
          <exon e_start="84126" e_stop="84468"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACTTGTTCAACTGGACCTGTAGCTCTACTCTCTGGTCTTGATCCTAATCCAATGAGCTTGGTGCTCCATTTCTTTGCAGTGGCCGTTTATGGAGTTGGTCGTTTACTTGTACCTTTTCCTTCTCCAAAGAAGTTGTGGATCGGAGCTAAATTAATATTGGTATGTACCTTAAATGTAGTATTCAAACTGTCTTCGTTGACTCTGAGCATGTGTGTGTTATATATTGAGCTACTTTCCAGTTGAAATTCCTACATACTCGTTCACCTTGTTTGAAAGTCTTGACCATTTTGGCATGCATGCTCTTTTTTTTTGTTCAGTCTGCATCAGGCATCATATTTCCCATCATAAAGGCAGAAGGGATCCGGCAAATGTTCTTTCCAACAACAATACCAGCATATCACAGAGCTCCTCCCGTGAAGACGGAGTCAGATTAAGCAGAAAATTTGTTGAAGTTTTGTTCCATGAATAGCATTAACATTTTTGCAGTTCCTTTCTCGAAGCACGAAATGTAAGTTCCACTCTCCCCTCACCCCAAACCCTACAAATAGAATAAGAATGACGACGAAACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTGAAATCTACCTTATTGTAGGCATATTATACCAAAAGGAACT</genome_strand>
        <mrna_strand>CACTTGTTCAACTGGACCTGTAGCTCTACTCTCTGGTCTTGATCCTAATCCAATGAGCTTGGTGCTCCATTTCTTTGCAGTGGCCGTTTATGGAGTTGGTCGTTTACTTGTACCTTTTCCTTCTCCAAAGAAGTTGTGGATCGGAGCTAAATTAATATTG..............................................................................................................................................................TCTGCATCAGGCATCATATTTCCCATCATAAAGGCAGAAGGGATCCGGCAAATGTTCTTTCCAACAACAATACCAGCATATCACAGAGCTCCTCCCGTGAAGACGGAGTCAGATTAAGCAGAAAATTTGTTGAAGTTTTGTTCCATGAATAGCATTAACATTTTTGCAGTTCCTTTCTCGAAGCACGAAATGTAAGTTCCACTCTCCCCTCACCCCAAACCCTACAAATAGAATAAGAATGACGACGAAACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTGAAATCTACCTTATTGTAGGCATATTATACCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E555136" ref_strand="+" ref_description="SGN-E555136 [cTSC-6-I2]">
      <seq>gttcaactggacctgtagctctactctctggtcttgatcctaatccaatgagcttggtgctccatttctttgcagtggccgtttatggagttggtcgtttacttgtaccttttccttctccaaagaagttgtggatcggagctaaattaatattgtctgcatcaggcatcatatttcccatcataaaggcagaagggatccggcaaatgttctttccaacaacaataccagcatatcacagagctcctcccgtgaagacggagtcagattaagcagaaaatttgttgaagttttgttccatgaatagcattaacatttttgcagttcctttctcgaagcacgaaatgtaagttccactctcccctcaccccaaaccctacaaatagaataagaatgacgacgaaaccttattgtaggcatattataccaaaaggaacttcaagtgtacgtattcattgaaatctaccttattgtaggcatattataccaaaaggaacttcaagtgtacgtattcatttaaatctagtcagactccctactctgtagaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="83513" stop="84818"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83813" g_stop="83967" g_length="155"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="155" r_length="155" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="83968" i_stop="84125" i_length="158">
            <donor d_prob="0.935" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="84126" g_stop="84518" g_length="393"/>
          <reference_exon_boundary r_type="cDNA" r_start="156" r_stop="548" r_length="393" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-E555136" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>548</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E555136" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83813" e_stop="83967"/>
          <exon e_start="84126" e_stop="84518"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTCAACTGGACCTGTAGCTCTACTCTCTGGTCTTGATCCTAATCCAATGAGCTTGGTGCTCCATTTCTTTGCAGTGGCCGTTTATGGAGTTGGTCGTTTACTTGTACCTTTTCCTTCTCCAAAGAAGTTGTGGATCGGAGCTAAATTAATATTGGTATGTACCTTAAATGTAGTATTCAAACTGTCTTCGTTGACTCTGAGCATGTGTGTGTTATATATTGAGCTACTTTCCAGTTGAAATTCCTACATACTCGTTCACCTTGTTTGAAAGTCTTGACCATTTTGGCATGCATGCTCTTTTTTTTTGTTCAGTCTGCATCAGGCATCATATTTCCCATCATAAAGGCAGAAGGGATCCGGCAAATGTTCTTTCCAACAACAATACCAGCATATCACAGAGCTCCTCCCGTGAAGACGGAGTCAGATTAAGCAGAAAATTTGTTGAAGTTTTGTTCCATGAATAGCATTAACATTTTTGCAGTTCCTTTCTCGAAGCACGAAATGTAAGTTCCACTCTCCCCTCACCCCAAACCCTACAAATAGAATAAGAATGACGACGAAACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTGAAATCTACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTTAAATCTAGTCAGACTCCCTACTCTGTAGAA</genome_strand>
        <mrna_strand>GTTCAACTGGACCTGTAGCTCTACTCTCTGGTCTTGATCCTAATCCAATGAGCTTGGTGCTCCATTTCTTTGCAGTGGCCGTTTATGGAGTTGGTCGTTTACTTGTACCTTTTCCTTCTCCAAAGAAGTTGTGGATCGGAGCTAAATTAATATTG..............................................................................................................................................................TCTGCATCAGGCATCATATTTCCCATCATAAAGGCAGAAGGGATCCGGCAAATGTTCTTTCCAACAACAATACCAGCATATCACAGAGCTCCTCCCGTGAAGACGGAGTCAGATTAAGCAGAAAATTTGTTGAAGTTTTGTTCCATGAATAGCATTAACATTTTTGCAGTTCCTTTCTCGAAGCACGAAATGTAAGTTCCACTCTCCCCTCACCCCAAACCCTACAAATAGAATAAGAATGACGACGAAACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTGAAATCTACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTTAAATCTAGTCAGACTCCCTACTCTGTAGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E350820" ref_strand="+" ref_description="SGN-E350820 [cTOS-7-E3]">
      <seq>tctggtcttgatcctaatccaatgagcttggtgctccatttctttgcagtggccgtttatggagttggtcgtttacttgtaccttttccttctccaaagaagttgtggatcggagctaaattaatattgtctgcatcaggcatcatatttcccatcataaaggcagaagggatccggcaaatgttctttccaacaacaataccagcatatcacagagctcctcccgtgaagacggagtcagattaagcagaaaatttgttgaagttttgttccatgaatagcattaacatttttgcagttcctttctcgaagcacgaaatgtaagttccactctcccctcaccccaaacccttacaatagaataagaatgacgacgaaaccttattgtaggcatattataccaaaagggacttcaagtgtacgtattcattgaaatctaccttattgtangcatattataccaaaaggaacttcaagtgtacgtattcattttaatctagtcagactccctactctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="83539" stop="84813"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83839" g_stop="83967" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="129" r_length="129" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="83968" i_stop="84125" i_length="158">
            <donor d_prob="0.935" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="84126" g_stop="84513" g_length="388"/>
          <reference_exon_boundary r_type="cDNA" r_start="130" r_stop="517" r_length="388" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-E350820" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>517</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E350820" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83839" e_stop="83967"/>
          <exon e_start="84126" e_stop="84513"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTGGTCTTGATCCTAATCCAATGAGCTTGGTGCTCCATTTCTTTGCAGTGGCCGTTTATGGAGTTGGTCGTTTACTTGTACCTTTTCCTTCTCCAAAGAAGTTGTGGATCGGAGCTAAATTAATATTGGTATGTACCTTAAATGTAGTATTCAAACTGTCTTCGTTGACTCTGAGCATGTGTGTGTTATATATTGAGCTACTTTCCAGTTGAAATTCCTACATACTCGTTCACCTTGTTTGAAAGTCTTGACCATTTTGGCATGCATGCTCTTTTTTTTTGTTCAGTCTGCATCAGGCATCATATTTCCCATCATAAAGGCAGAAGGGATCCGGCAAATGTTCTTTCCAACAACAATACCAGCATATCACAGAGCTCCTCCCGTGAAGACGGAGTCAGATTAAGCAGAAAATTTGTTGAAGTTTTGTTCCATGAATAGCATTAACATTTTTGCAGTTCCTTTCTCGAAGCACGAAATGTAAGTTCCACTCTCCCCTCACCCCAAACCCTACAAATAGAATAAGAATGACGACGAAACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTGAAATCTACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTTAAATCTAGTCAGACTCCCTACTCTG</genome_strand>
        <mrna_strand>TCTGGTCTTGATCCTAATCCAATGAGCTTGGTGCTCCATTTCTTTGCAGTGGCCGTTTATGGAGTTGGTCGTTTACTTGTACCTTTTCCTTCTCCAAAGAAGTTGTGGATCGGAGCTAAATTAATATTG..............................................................................................................................................................TCTGCATCAGGCATCATATTTCCCATCATAAAGGCAGAAGGGATCCGGCAAATGTTCTTTCCAACAACAATACCAGCATATCACAGAGCTCCTCCCGTGAAGACGGAGTCAGATTAAGCAGAAAATTTGTTGAAGTTTTGTTCCATGAATAGCATTAACATTTTTGCAGTTCCTTTCTCGAAGCACGAAATGTAAGTTCCACTCTCCCCTCACCCCAAACCCTTACAATAGAATAAGAATGACGACGAAACCTTATTGTAGGCATATTATACCAAAAGGGACTTCAAGTGTACGTATTCATTGAAATCTACCTTATTGTANGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTTTAATCTAGTCAGACTCCCTACTCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E303930" ref_strand="+" ref_description="SGN-E303930 [cLEX-4-O10]">
      <seq>catttctttgcagtggccgtttatggagttggtcgtttacttgtaccttttccttctccaaagaagttgtggatcggagctaaattaatattgtctgcatcaggcatcatatttcccatcataaaggcagaagggatccggcaaatgttctttccaacaacaataccagcatatcacagagctcctcccgtgaagacggagtcagattaagcagaaaatttgttgaagttttgttccatgaatagcattaacatttttgcagttcctttctcgaagcacgaaatgtaagttccactctcccctcaccccaaaccctacaaatagaataagaatgacgacgaaaccttattgtaggcatattataccaaaaggaacttcaagtgtacgtattcattgaaatctaccttattgtaggcatattataccaaaaggaacttcaagtgtacgtattcatttaaatctagtcagactccctactctgtagaaatgtatattgtggcattcactttatatcttagagagttcaatttgtacgtcagttgtagctctgagatagacatcaacggttatgtttctgtattgtacatcacattgatgtatgtatcag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="83575" stop="84939"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83875" g_stop="83967" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="93" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="83968" i_stop="84125" i_length="158">
            <donor d_prob="0.935" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="84126" g_stop="84639" g_length="514"/>
          <reference_exon_boundary r_type="cDNA" r_start="94" r_stop="607" r_length="514" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-E303930" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>607</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E303930" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83875" e_stop="83967"/>
          <exon e_start="84126" e_stop="84639"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATTTCTTTGCAGTGGCCGTTTATGGAGTTGGTCGTTTACTTGTACCTTTTCCTTCTCCAAAGAAGTTGTGGATCGGAGCTAAATTAATATTGGTATGTACCTTAAATGTAGTATTCAAACTGTCTTCGTTGACTCTGAGCATGTGTGTGTTATATATTGAGCTACTTTCCAGTTGAAATTCCTACATACTCGTTCACCTTGTTTGAAAGTCTTGACCATTTTGGCATGCATGCTCTTTTTTTTTGTTCAGTCTGCATCAGGCATCATATTTCCCATCATAAAGGCAGAAGGGATCCGGCAAATGTTCTTTCCAACAACAATACCAGCATATCACAGAGCTCCTCCCGTGAAGACGGAGTCAGATTAAGCAGAAAATTTGTTGAAGTTTTGTTCCATGAATAGCATTAACATTTTTGCAGTTCCTTTCTCGAAGCACGAAATGTAAGTTCCACTCTCCCCTCACCCCAAACCCTACAAATAGAATAAGAATGACGACGAAACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTGAAATCTACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTTAAATCTAGTCAGACTCCCTACTCTGTAGAAATGTATATTGTGGCATTCACTTTATATCTTAGAGAGTTCAATTTGTACGTCAGTTGTAGCTCTGAGATAGACATCAACGGTTATGTTTCTGTATTGTACATCACATTGATGTATGTATCAG</genome_strand>
        <mrna_strand>CATTTCTTTGCAGTGGCCGTTTATGGAGTTGGTCGTTTACTTGTACCTTTTCCTTCTCCAAAGAAGTTGTGGATCGGAGCTAAATTAATATTG..............................................................................................................................................................TCTGCATCAGGCATCATATTTCCCATCATAAAGGCAGAAGGGATCCGGCAAATGTTCTTTCCAACAACAATACCAGCATATCACAGAGCTCCTCCCGTGAAGACGGAGTCAGATTAAGCAGAAAATTTGTTGAAGTTTTGTTCCATGAATAGCATTAACATTTTTGCAGTTCCTTTCTCGAAGCACGAAATGTAAGTTCCACTCTCCCCTCACCCCAAACCCTACAAATAGAATAAGAATGACGACGAAACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTGAAATCTACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTTAAATCTAGTCAGACTCCCTACTCTGTAGAAATGTATATTGTGGCATTCACTTTATATCTTAGAGAGTTCAATTTGTACGTCAGTTGTAGCTCTGAGATAGACATCAACGGTTATGTTTCTGTATTGTACATCACATTGATGTATGTATCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E277554" ref_strand="+" ref_description="SGN-E277554 [cLER-6-A2]">
      <seq>tttttttgacgtacaaattgaactctctaagatataaagtgaatgccacaatatacatttctacagagtagggagtctgactagatttaaatgaatacgtacacttgaagttccttttggtataatatgcctacaataaggtagatttcaatgaatacgtacacttgaagttccttttggtataatatgcctacaataaggtttcgtcgtcattcttattctatttgtagggtttggggtgaggggag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="84870" stop="84029"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84576" g_stop="84329" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="248" r_length="248" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-E277554" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>248</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E277554" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84576" e_stop="84329"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACAACTGACGTACAAATTGAACTCTCTAAGATATAAAGTGAATGCCACAATATACATTTCTACAGAGTAGGGAGTCTGACTAGATTTAAATGAATACGTACACTTGAAGTTCCTTTTGGTATAATATGCCTACAATAAGGTAGATTTCAATGAATACGTACACTTGAAGTTCCTTTTGGTATAATATGCCTACAATAAGGTTTCGTCGTCATTCTTATTCTATTTGTAGGGTTTGGGGTGAGGGGAG</genome_strand>
        <mrna_strand>TTTTTTTGACGTACAAATTGAACTCTCTAAGATATAAAGTGAATGCCACAATATACATTTCTACAGAGTAGGGAGTCTGACTAGATTTAAATGAATACGTACACTTGAAGTTCCTTTTGGTATAATATGCCTACAATAAGGTAGATTTCAATGAATACGTACACTTGAAGTTCCTTTTGGTATAATATGCCTACAATAAGGTTTCGTCGTCATTCTTATTCTATTTGTAGGGTTTGGGGTGAGGGGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E375319" ref_strand="+" ref_description="SGN-E375319 [TUS-15-F18]">
      <seq>gaatcccttgacaaatcggcggtagtagctagctaacccaacaaagctccttatttctgacacattagtaggtcttacccaattcttcactgtctcaatcttagaaggatccaccatcactccatccttagaaaccacgttccccaagaaggacactacatctagccaaaactcacacttagagaacttggcataaaactttttctccctcaacatttccaataccattctcaaatgctcttcatgttcctccttacttttagagtatatcagtatatcatcaataaatacgatcacaaagagatccaaatatggcttaaaaatcccttttattaaactcataaacgcagcaggggcattcataagaccaaaagacatcactacaaatttgtaatgcccatacctggttctaaaagcagtctttggcacatccgttgcccgtattttcaattgatgataaccggatctcaagtcaatcttagaaaagacacaagcaccttgtaactgatcgaacaagtcattaatgcgaggaagaggatacttgttctttatggttaccttgttcaactgccggtagcctatgcacatccgaaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="87513" stop="86318"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="87213" g_stop="86618" g_length="596"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="596" r_length="596" r_score="0.948"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-E375319" ref_strand="+">
        <total_alignment_score>0.948</total_alignment_score>
        <cumulative_length_of_scored_exons>596</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E375319" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="87213" e_stop="86618"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACTGCATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCCTCATGTTCCTTCTTGATCTTTGAGTATACCAATATATCATCAATAAATACGATCACAAATAGATCCAGATATAGCTTAAAAATCCCGTTCATCAAACTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATACCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAGAAGACACAAGCTCCTTGTAACTGATCGAACAAGTCATCAATGCGAGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTTAGTTGTCTGTAGTCTATGCACATTCGAAAAC</genome_strand>
        <mrna_strand>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTTCCCCAAGAAGGACACTACATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAACTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTCCTTACTTTTAGAGTATATCAGTATATCATCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCTTTTATTAAACTCATAAACGCAGCAGGGGCATTCATAAGACCAAAAGACATCACTACAAATTTGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAAAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATTAATGCGAGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTCAACTGCCGGTAGCCTATGCACATCCGAAAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E204434" ref_strand="+" ref_description="SGN-E204434 [cLEC-13-J16]">
      <seq>gaatcccttgacaaatcggcggtagtagctagctaacccaacaaagctccttatttctgacacattagtaggtcttacccaattcttcactgtctcaatcttagaaggatccaccatcactccatccttagaaaccacgttccccaagaaggacactacatctagccaaaactcacacttagagaacttggcataaaactttttctccctcaacatttccaataccattctcaaatgctcttcatgttcctccttacttttagagtatatcagtatatcatcaataaatacgatcacaaagagatccaaatatggcttaaaaatcccttttattaaactcataaacgcagcaggggcattcataagaccaaaagacatcactacaaatttgtaatgcccatacctggttctaaaagcagtctttggcacatccgttgcccgtattttcaattgatgataaccggatctcaagtcaatcttagaaaagacacaagcaccttgtaactgatcgaacaagtcattaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="87513" stop="86388"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="87213" g_stop="86688" g_length="526"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="526" r_length="526" r_score="0.954"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-E204434" ref_strand="+">
        <total_alignment_score>0.954</total_alignment_score>
        <cumulative_length_of_scored_exons>526</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E204434" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="87213" e_stop="86688"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACTGCATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCCTCATGTTCCTTCTTGATCTTTGAGTATACCAATATATCATCAATAAATACGATCACAAATAGATCCAGATATAGCTTAAAAATCCCGTTCATCAAACTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATACCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAGAAGACACAAGCTCCTTGTAACTGATCGAACAAGTCATCAATG</genome_strand>
        <mrna_strand>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTTCCCCAAGAAGGACACTACATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAACTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTCCTTACTTTTAGAGTATATCAGTATATCATCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCTTTTATTAAACTCATAAACGCAGCAGGGGCATTCATAAGACCAAAAGACATCACTACAAATTTGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAAAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATTAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E240817" ref_strand="+" ref_description="SGN-E240817 [cLED-24-J5]">
      <seq>gtctcacccatttcttcactgtctcaatcttaccaggatccaccatcactccatccttagaaaccacgtgccccaagaaggacactgcatctatccaaaactcacacttagagaacttggcataaagctttttctccctcaacatttctaatacaattctcaaatgctcctcatgttccttcttactattagaggatatcagtatatcatcaatgaacatgatgacgcagagatccaaatatggcttaaaatcccgttcatcaagctcatgaacgcagcaggggcattcgtaagaccaaaagacatcactacaaattcgtaatgcccatacctggttctaaaagcagtctttggcaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="87442" stop="86484"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="87142" g_stop="86784" g_length="359"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="358" r_length="358" r_score="0.928"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-E240817" ref_strand="+">
        <total_alignment_score>0.928</total_alignment_score>
        <cumulative_length_of_scored_exons>359</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E240817" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="87142" e_stop="86784"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACTGCATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCCTCATGTTCCTTCTTGATCTTTGAGTATACCAATATATCATCAATAAATACGATCACAAATAGATCCAGATATAGCTTAAAAATCCCGTTCATCAAACTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATACCCATACCTGGTTCTAAAAGCAGTCTTTGGCACA</genome_strand>
        <mrna_strand>GTCTCACCCATTTCTTCACTGTCTCAATCTTACCAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACTGCATCTATCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCTAATACAATTCTCAAATGCTCCTCATGTTCCTTCTTACTATTAGAGGATATCAGTATATCATCAATGAACATGATGACGCAGAGATCCAAATATGGCTT-AAAATCCCGTTCATCAAGCTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E231589" ref_strand="+" ref_description="SGN-E231589 [cLED-4-L18]">
      <seq>tcgattctccttctctctctttctgttcttttctttttcttattcaaaccctccttcttttaccctaattagcatataattaagaataaaagatggaataataacccactaatttactcaaggttacctcttttaacccccaggtaattagacttattaacataaacccactaactttataattaaagtaggaatagtccaaaacgtcccttaaaacgtgtaaagaaatccgacccagactgggattacgcaacctgtgatggcccgtcgtgcctgcgacggtccgtcctgcaggtcgtcgcaaggttcatagactcaatttccaccaaagagtctgtgacggtccgtcacgcccgtgacggtccgtcgtgccattccgttacgaagttcagagagtcgatttttagtacccaatttcagaatttctaagtgttttgaaacgagactcctcgacggtccatcgtgctcatgacggtccgtcgtgggttccgtcgtctcaacctgtttttccaaaaataaaatctgctactcaaaacgactaaacaggtcgttacattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="90205" stop="89048"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="89905" g_stop="89347" g_length="559"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="558" r_length="558" r_score="0.921"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-E231589" ref_strand="+">
        <total_alignment_score>0.921</total_alignment_score>
        <cumulative_length_of_scored_exons>559</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E231589" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="89905" e_stop="89347"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGATTCTCCTTCTCTCTCTTTCTGTTCTTTTCTTTTTCTTA-TCAAAACCTCTTTCTTTTACCCTAATTAGCATATAATTTAAGAATAAAATATGGCAATAATAACCCACTAATTTACTCAAGGTTACCTCTTTTAACCCCCAAGTAATTAGACTTATTAACATAAACCCACTAACTTTATAATTAAAGTAGGAATAGTCCAAAACGTCCCTTAAAACGTGTAAAGAAATTTGACCTCGCCTGAGATTACGCAGCCTGTGACGGGTCGTCGTGCCTGCGACGGTCCGTCCTGCTGCTCCGTCACAGAGTTCAGAGACTGAAATT-CTCTGAAGAGTGTGTGACGGTCCGTCACGCCTGTGACGGTCCGTCCTGCTATTCCGTTACGAAGTTCAGAGAGTCGATTTTCAGTACCCAATTTCAGAATTTCTAAGTGTTTTGAAACGAGACCCCTCGACGGTCCGTCGTGCCCATGACGGTCCGTCGTGGGTTCCGTCGTCTCAGCCTGTTTTTCCAGAAATAAAATCTGCTACTCAAAACGACTAAACAGGTCGTTACAATA</genome_strand>
        <mrna_strand>TCGATTCTCCTTCTCTCTCTTTCTGTTCTTTTCTTTTTCTTATTCAAACCCTCCTTCTTTTACCCTAATTAGCATATAA-TTAAGAATAAAAGATGG-AATAATAACCCACTAATTTACTCAAGGTTACCTCTTTTAACCCCCAGGTAATTAGACTTATTAACATAAACCCACTAACTTTATAATTAAAGTAGGAATAGTCCAAAACGTCCCTTAAAACGTGTAAAGAAATCCGACCCAGACTGGGATTACGCAACCTGTGATGGCCCGTCGTGCCTGCGACGGTCCGTCCTGCAGGT-CGTCGCAAGGTTCATAGACTCAATTTCCACCAAAGAGTCTGTGACGGTCCGTCACGCCCGTGACGGTCCGTCGTGCCATTCCGTTACGAAGTTCAGAGAGTCGATTTTTAGTACCCAATTTCAGAATTTCTAAGTGTTTTGAAACGAGACTCCTCGACGGTCCATCGTGCTCATGACGGTCCGTCGTGGGTTCCGTCGTCTCAACCTGTTTTTCCAAAAATAAAATCTGCTACTCAAAACGACTAAACAGGTCGTTACATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E396058" ref_strand="+" ref_description="SGN-E396058 [TUS-18-N22]">
      <seq>atcgattctccttctctctctttctgttcttttctttttcttattcaaaccctccttcttttaccctaattagcatataattaagaataaaagatggaataataacccactaatttactcaaggttacctcttttaacccccaggtaattagacttattaacataaacccactaactttataattaaagtaggaatagtccaaaacgtcccttaaaacgtgtaaagaaatccgacccagactgggattacgcaacctgtgatggcccgtcgtgcctgcgacggtccgtcctgcaggtcgtcgcaaggttcagagactcaatttccaccaaagagtctgtgacggtccgtcacgcccgtgacggtccgtcgtgccattccgttacgaagttcagagagtcgatttttagtacccaatttcagaatttctaagtgttttgaaacgagactcctcgacggtccatcgtgctcatgacggtccgtcgtgggttccgtcgtctcaacctgtgtttccaaaaataaaatctgctactcacaacgactaaacaggtcgttacatttaggttcttcatagttaactattattattattttacgatttataacactatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="90206" stop="89042"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="89906" g_stop="89350" g_length="557"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="556" r_length="556" r_score="0.923"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-E396058" ref_strand="+">
        <total_alignment_score>0.923</total_alignment_score>
        <cumulative_length_of_scored_exons>557</cumulative_length_of_scored_exons>
        <coverage percentage="0.913" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E396058" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="89906" e_stop="89350"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCGATTCTCCTTCTCTCTCTTTCTGTTCTTTTCTTTTTCTTA-TCAAAACCTCTTTCTTTTACCCTAATTAGCATATAATTTAAGAATAAAATATGGCAATAATAACCCACTAATTTACTCAAGGTTACCTCTTTTAACCCCCAAGTAATTAGACTTATTAACATAAACCCACTAACTTTATAATTAAAGTAGGAATAGTCCAAAACGTCCCTTAAAACGTGTAAAGAAATTTGACCTCGCCTGAGATTACGCAGCCTGTGACGGGTCGTCGTGCCTGCGACGGTCCGTCCTGCTGCTCCGTCACAGAGTTCAGAGACTGAAATT-CTCTGAAGAGTGTGTGACGGTCCGTCACGCCTGTGACGGTCCGTCCTGCTATTCCGTTACGAAGTTCAGAGAGTCGATTTTCAGTACCCAATTTCAGAATTTCTAAGTGTTTTGAAACGAGACCCCTCGACGGTCCGTCGTGCCCATGACGGTCCGTCGTGGGTTCCGTCGTCTCAGCCTGTTTTTCCAGAAATAAAATCTGCTACTCAAAACGACTAAACAGGTCGTTACA</genome_strand>
        <mrna_strand>ATCGATTCTCCTTCTCTCTCTTTCTGTTCTTTTCTTTTTCTTATTCAAACCCTCCTTCTTTTACCCTAATTAGCATATAA-TTAAGAATAAAAGATGG-AATAATAACCCACTAATTTACTCAAGGTTACCTCTTTTAACCCCCAGGTAATTAGACTTATTAACATAAACCCACTAACTTTATAATTAAAGTAGGAATAGTCCAAAACGTCCCTTAAAACGTGTAAAGAAATCCGACCCAGACTGGGATTACGCAACCTGTGATGGCCCGTCGTGCCTGCGACGGTCCGTCCTGCAGGT-CGTCGCAAGGTTCAGAGACTCAATTTCCACCAAAGAGTCTGTGACGGTCCGTCACGCCCGTGACGGTCCGTCGTGCCATTCCGTTACGAAGTTCAGAGAGTCGATTTTTAGTACCCAATTTCAGAATTTCTAAGTGTTTTGAAACGAGACTCCTCGACGGTCCATCGTGCTCATGACGGTCCGTCGTGGGTTCCGTCGTCTCAACCTGTGTTTCCAAAAATAAAATCTGCTACTCACAACGACTAAACAGGTCGTTACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E396054" ref_strand="+" ref_description="SGN-E396054 [TUS-18-N18]">
      <seq>atcgattctccttctctctctttctgttcttttctttttcttattcaaaccctccttcttttaccctaattagcatataattaagaataaaagatggaataataacccactaatttactcaaggttacctcttttaacccccaggtaattagacttattaacataaacccactaactttataattaaagtaggaatagtccaaaacgtcccttaaaacgtgtaaagaaatccgacccagactgggattacgcaacctgtgatggcccgtcgtgcctgcgacggtccgtcctgcaggtcgtcgcaaggttcagagactcaatttccaccaaagagtctgtgacggtccgtcacgcccgtgacggtccgtcgtgccattccgttacgaagttcagagagtcgatttttagtacccaatttcagaatttctaagtgttttgaaacgagactcctcgacggtccatcgtgctcatgacggtccgtcgtgggttccgtcgtctcaacctgtttttccaaaaataaaatctgctactcaaaacgactaaacaggtcgttacatttatgttcttcctacttaaatattattattattttacgatttataacactattagaaacaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="90206" stop="89044"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="89906" g_stop="89350" g_length="557"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="556" r_length="556" r_score="0.926"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-E396054" ref_strand="+">
        <total_alignment_score>0.926</total_alignment_score>
        <cumulative_length_of_scored_exons>557</cumulative_length_of_scored_exons>
        <coverage percentage="0.901" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E396054" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="89906" e_stop="89350"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCGATTCTCCTTCTCTCTCTTTCTGTTCTTTTCTTTTTCTTA-TCAAAACCTCTTTCTTTTACCCTAATTAGCATATAATTTAAGAATAAAATATGGCAATAATAACCCACTAATTTACTCAAGGTTACCTCTTTTAACCCCCAAGTAATTAGACTTATTAACATAAACCCACTAACTTTATAATTAAAGTAGGAATAGTCCAAAACGTCCCTTAAAACGTGTAAAGAAATTTGACCTCGCCTGAGATTACGCAGCCTGTGACGGGTCGTCGTGCCTGCGACGGTCCGTCCTGCTGCTCCGTCACAGAGTTCAGAGACTGAAATT-CTCTGAAGAGTGTGTGACGGTCCGTCACGCCTGTGACGGTCCGTCCTGCTATTCCGTTACGAAGTTCAGAGAGTCGATTTTCAGTACCCAATTTCAGAATTTCTAAGTGTTTTGAAACGAGACCCCTCGACGGTCCGTCGTGCCCATGACGGTCCGTCGTGGGTTCCGTCGTCTCAGCCTGTTTTTCCAGAAATAAAATCTGCTACTCAAAACGACTAAACAGGTCGTTACA</genome_strand>
        <mrna_strand>ATCGATTCTCCTTCTCTCTCTTTCTGTTCTTTTCTTTTTCTTATTCAAACCCTCCTTCTTTTACCCTAATTAGCATATAA-TTAAGAATAAAAGATGG-AATAATAACCCACTAATTTACTCAAGGTTACCTCTTTTAACCCCCAGGTAATTAGACTTATTAACATAAACCCACTAACTTTATAATTAAAGTAGGAATAGTCCAAAACGTCCCTTAAAACGTGTAAAGAAATCCGACCCAGACTGGGATTACGCAACCTGTGATGGCCCGTCGTGCCTGCGACGGTCCGTCCTGCAGGT-CGTCGCAAGGTTCAGAGACTCAATTTCCACCAAAGAGTCTGTGACGGTCCGTCACGCCCGTGACGGTCCGTCGTGCCATTCCGTTACGAAGTTCAGAGAGTCGATTTTTAGTACCCAATTTCAGAATTTCTAAGTGTTTTGAAACGAGACTCCTCGACGGTCCATCGTGCTCATGACGGTCCGTCGTGGGTTCCGTCGTCTCAACCTGTTTTTCCAAAAATAAAATCTGCTACTCAAAACGACTAAACAGGTCGTTACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E241959" ref_strand="+" ref_description="SGN-E241959 [cLED-27-I11]">
      <seq>tcgattctccttctctctctttctgttcttttctttttcttattcaaaccctccttcttttaccctaattagcatataattaagaataaaagatggaataataacccactaatttactcaaggttacctcttttaacccccaggtaattagacttattaacataaacccactaactttataattaaagtaggaatagtccaaaacgtcccttaaaacgtgtaaagaaatccgacccagactgggattacgcaacctgtgatggcccgtcgtgcctgcgacggtccgtcctgcaggtcgtcgcaaggttcagagactcaatttccaccaaagagtctgtgacggtccgtcacgcccgtgacggtccgtcgtgccattccgttacgaagttcagagagtcgatttttagtacccaatttcagaatttctaagtgttttgaaacgagactcctcgacggtccatcgtgctcatgacggtccgtcgtgggttccgtcgtctcaacctgtttttccaaaaataaaatctgctactcaaaacgactaaaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="90205" stop="89060"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="89905" g_stop="89360" g_length="546"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="545" r_length="545" r_score="0.925"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-E241959" ref_strand="+">
        <total_alignment_score>0.925</total_alignment_score>
        <cumulative_length_of_scored_exons>546</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E241959" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="89905" e_stop="89360"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGATTCTCCTTCTCTCTCTTTCTGTTCTTTTCTTTTTCTTA-TCAAAACCTCTTTCTTTTACCCTAATTAGCATATAATTTAAGAATAAAATATGGCAATAATAACCCACTAATTTACTCAAGGTTACCTCTTTTAACCCCCAAGTAATTAGACTTATTAACATAAACCCACTAACTTTATAATTAAAGTAGGAATAGTCCAAAACGTCCCTTAAAACGTGTAAAGAAATTTGACCTCGCCTGAGATTACGCAGCCTGTGACGGGTCGTCGTGCCTGCGACGGTCCGTCCTGCTGCTCCGTCACAGAGTTCAGAGACTGAAATT-CTCTGAAGAGTGTGTGACGGTCCGTCACGCCTGTGACGGTCCGTCCTGCTATTCCGTTACGAAGTTCAGAGAGTCGATTTTCAGTACCCAATTTCAGAATTTCTAAGTGTTTTGAAACGAGACCCCTCGACGGTCCGTCGTGCCCATGACGGTCCGTCGTGGGTTCCGTCGTCTCAGCCTGTTTTTCCAGAAATAAAATCTGCTACTCAAAACGACTAAACA</genome_strand>
        <mrna_strand>TCGATTCTCCTTCTCTCTCTTTCTGTTCTTTTCTTTTTCTTATTCAAACCCTCCTTCTTTTACCCTAATTAGCATATAA-TTAAGAATAAAAGATGG-AATAATAACCCACTAATTTACTCAAGGTTACCTCTTTTAACCCCCAGGTAATTAGACTTATTAACATAAACCCACTAACTTTATAATTAAAGTAGGAATAGTCCAAAACGTCCCTTAAAACGTGTAAAGAAATCCGACCCAGACTGGGATTACGCAACCTGTGATGGCCCGTCGTGCCTGCGACGGTCCGTCCTGCAGGT-CGTCGCAAGGTTCAGAGACTCAATTTCCACCAAAGAGTCTGTGACGGTCCGTCACGCCCGTGACGGTCCGTCGTGCCATTCCGTTACGAAGTTCAGAGAGTCGATTTTTAGTACCCAATTTCAGAATTTCTAAGTGTTTTGAAACGAGACTCCTCGACGGTCCATCGTGCTCATGACGGTCCGTCGTGGGTTCCGTCGTCTCAACCTGTTTTTCCAAAAATAAAATCTGCTACTCAAAACGACTAAACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E236652" ref_strand="+" ref_description="SGN-E236652 [cLED-13-L8]">
      <seq>tcgattctccttctctctctttctgttcttttctttttcttattcaaaccctccttcttttaccctaattagcatataattaagaataaaagatggaataataacccactaatttactcaaggttacctcttttaacccccaggtaattagacttattaacataaacccactaactttataattaaagtaggaatagtccaaaacgtcccttaaaacgtgtaaagaaatccgacccagactgggattacgcaacctgtgatggcccgtcgtgcctgcgacggtccgtcctgcaggtcgtcgcaaggttcagagactcaatttccaccaaagagtctgtgacggtccgtcacgcccgtgacggtccgtcgtgccattccgttacgaagttcagagagtcgatttttagtacccaatttcagaatttctaagtgttttgaaacgagactcctcgacggtccatcgtgctcatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="90205" stop="89133"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="89905" g_stop="89433" g_length="473"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="472" r_length="472" r_score="0.918"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-E236652" ref_strand="+">
        <total_alignment_score>0.918</total_alignment_score>
        <cumulative_length_of_scored_exons>473</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E236652" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="89905" e_stop="89433"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGATTCTCCTTCTCTCTCTTTCTGTTCTTTTCTTTTTCTTA-TCAAAACCTCTTTCTTTTACCCTAATTAGCATATAATTTAAGAATAAAATATGGCAATAATAACCCACTAATTTACTCAAGGTTACCTCTTTTAACCCCCAAGTAATTAGACTTATTAACATAAACCCACTAACTTTATAATTAAAGTAGGAATAGTCCAAAACGTCCCTTAAAACGTGTAAAGAAATTTGACCTCGCCTGAGATTACGCAGCCTGTGACGGGTCGTCGTGCCTGCGACGGTCCGTCCTGCTGCTCCGTCACAGAGTTCAGAGACTGAAATT-CTCTGAAGAGTGTGTGACGGTCCGTCACGCCTGTGACGGTCCGTCCTGCTATTCCGTTACGAAGTTCAGAGAGTCGATTTTCAGTACCCAATTTCAGAATTTCTAAGTGTTTTGAAACGAGACCCCTCGACGGTCCGTCGTGCCCATGA</genome_strand>
        <mrna_strand>TCGATTCTCCTTCTCTCTCTTTCTGTTCTTTTCTTTTTCTTATTCAAACCCTCCTTCTTTTACCCTAATTAGCATATAA-TTAAGAATAAAAGATGG-AATAATAACCCACTAATTTACTCAAGGTTACCTCTTTTAACCCCCAGGTAATTAGACTTATTAACATAAACCCACTAACTTTATAATTAAAGTAGGAATAGTCCAAAACGTCCCTTAAAACGTGTAAAGAAATCCGACCCAGACTGGGATTACGCAACCTGTGATGGCCCGTCGTGCCTGCGACGGTCCGTCCTGCAGGT-CGTCGCAAGGTTCAGAGACTCAATTTCCACCAAAGAGTCTGTGACGGTCCGTCACGCCCGTGACGGTCCGTCGTGCCATTCCGTTACGAAGTTCAGAGAGTCGATTTTTAGTACCCAATTTCAGAATTTCTAAGTGTTTTGAAACGAGACTCCTCGACGGTCCATCGTGCTCATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E242359" ref_strand="+" ref_description="SGN-E242359 [cLEE-3-K21]">
      <seq>cctaatctactttgttaataatgatgccttggtataaaagaaggcttgatgaacgaaagtggtgagattaggggatcgggtgccacgttccggtaccaggatagaatatggatcgggtgtcacgttccgacaccaggatagaatatggatcgggtgccacgttccggtaccaggatagaatatggatcgggtgtcacgttccgacaccaggatagaatatggatcgggtgtcacgttctgacaccaggatagaatatggatcgggtgccacgttccggtgccaggatagtatattgaggagtggagtgtcacgtaaggacacgaggggaataaatatgatgaatcttgaaatatgttaatatatgcaatccaatgaactaaattcccaaataagtatgatgaggaggtgtgagtcctcattgatgtgcttggtgatgcaaccaagggttatggtaattgcaaatgctgcatgctaaggatattagttaattttatgatattgcttaatacatact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="73559" stop="90957"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90153" g_stop="90671" g_length="519"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="515" r_length="515" r_score="0.902"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-E242359" ref_strand="+">
        <total_alignment_score>0.902</total_alignment_score>
        <cumulative_length_of_scored_exons>519</cumulative_length_of_scored_exons>
        <coverage percentage="1.008" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E242359" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90153" e_stop="90671"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTAATCT-CTTTGTTAATGATGAGACCTTGGCATAAAAGAAGGCTTGATGAACGAAAGTAGTGAGATTAGGGGATCGGGTGCCACGTTCCGGTACCAGGATAGTATATGAGGATCGGAGTGTCACGTTCCGACACCAGGATAGAATATGGATCGGGTGCCACGTTCCGGTACCAGGATAGAATGAGGATCGGAGTGTCACGTTCCGACACCAGGATAGTATATGGATCGGGTGCCACGTTCCGGTACCAGGATAGAATGAGGATCGGAGTGTCACGTTCCGACACCAGGATAGTATATTGAGGAGCGGAGTGTCACGTACCGACACGAGAGGAATAAAGATAATGAATCTTGAAAGATGTTAATATATTCAATCTAATGAACCTAATTCCCAAATGAGTATGATGAGGAGGTGTGAGTCCTCATTGATGAGCTTAGTGTTGTAACCAAGGGTTATGGTAATCGTAAATGCTACATGCTAAGGATATTAGTTGATTTTATGATATTATCTGATATATACT</genome_strand>
        <mrna_strand>CCTAATCTACTTTGTTAATAATGATGCCTTGGTATAAAAGAAGGCTTGATGAACGAAAGTGGTGAGATTAGGGGATCGGGTGCCACGTTCCGGTACCAGGATAGAATAT--GGATCGG-GTGTCACGTTCCGACACCAGGATAGAATATGGATCGGGTGCCACGTTCCGGTACCAGGATAGAATATGGATCGG-GTGTCACGTTCCGACACCAGGATAGAATATGGATCGGGTGTCACGTTCTGACACCAGGATAGAATATGGATCGG-GTGCCACGTTCCGGTGCCAGGATAGTATATTGAGGAGTGGAGTGTCACGTAAGGACACGAGGGGAATAAATATGATGAATCTTGAAATATGTTAATATATGCAATCCAATGAACTAAATTCCCAAATAAGTATGATGAGGAGGTGTGAGTCCTCATTGATGTGCTTGGTGATGCAACCAAGGGTTATGGTAATTGCAAATGCTGCATGCTAAGGATATTAGTTAATTTTATGATATTGCTTAATACATACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E298638" ref_strand="+" ref_description="SGN-E298638 [cLET-44-A20]">
      <seq>tcattacatcggatttcagggtgagctaacgcttctagcttggactggatcttcttcttcatgtcttgatgccttgaagttccggcatggactagctgtttatgtattttagcttcttagatactcttagatttagtaatttgaagtacatgttcttgtgatgatgactgccagattttggggataataatagttgttgagtttttagaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="90523" stop="91315"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90814" g_stop="91012" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="200" r_length="200" r_score="0.925"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="207" polyA_stop="219"/>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-E298638" ref_strand="+">
        <total_alignment_score>0.925</total_alignment_score>
        <cumulative_length_of_scored_exons>199</cumulative_length_of_scored_exons>
        <coverage percentage="0.909" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E298638" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90814" e_stop="91012"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATTATTCCGGATATCAGGGTGAGCTAATGCTTCTAGCTTGGACTGGATCTTCCTCTTCATGTCTTGATGCCTTGAAGTTCCGGCATGGACTAGCT-TTTATGTATTTTTAGCTTCTTAGAAACTCTTAGATTTAGTAATTTGAAGTAGATGTTCTTGTGATGATGACTTCCAGATTTTGGGGA-AATAATAGTTATTGA</genome_strand>
        <mrna_strand>TCATTACATCGGATTTCAGGGTGAGCTAACGCTTCTAGCTTGGACTGGATCTTCTTCTTCATGTCTTGATGCCTTGAAGTTCCGGCATGGACTAGCTGTTTATGTA-TTTTAGCTTCTTAGATACTCTTAGATTTAGTAATTTGAAGTACATGTTCTTGTGATGATGACTGCCAGATTTTGGGGATAATAATAGTTGTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E542915" ref_strand="+" ref_description="SGN-E542915 [TUS-64-H10]">
      <seq>tttttttttattgtcatcctcgcaattttcacccaaaatcacacggtccaattggatccccaatttcggattgcgatgcttcttataaatacaaacaatttctaccatgctttctccctcgttttctccaaacacaaatttcctctatctgcagcctctcctccaccacccaaatcatcattttctcaggcctctgattcaattacaaagaacaaattgaagttacctttggtttctttgaccaaatctttgccaaatacacaatttgatcttattcagagcgagaaaatggtgaatttcatgatggataagtatattgttcccagttttgttgtttctctattggggttccttcttctttatgttttgcgaccaagaacccccaattataagaaaatggatcttaaatctacccgaaaatgtgaaacccacaacgtaatttctagaaaattggagaaagggaccgatgccgatgttataattgttggagctggggttgctggtgctgctcttgctcatacccttgctaaggaaggacgaaatgttcacgtcatcgaaagggatttgacagagccggaccggattgttggcgaattgcttcagcctgggggttatcttaaaatgattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="79545" stop="97949"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="96139" g_stop="96669" g_length="531"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="531" r_length="531" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="96670" i_stop="97552" i_length="883">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="97553" g_stop="97649" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="532" r_stop="628" r_length="97" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-E542915" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>628</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E542915" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="96139" e_stop="96669"/>
          <exon e_start="97553" e_stop="97649"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTTTTTATTGTCATCCTCGCAATTTTCACCCAAAATCACACGGTCCAATTGGATCCCCAATTTCGGATTGCGATGCTTCTTATAAATACAAACAATTTCTACCATGCTTTCTCCCTCGTTTTCTCCAAACACAAATTTCCTCTATCTGCAGCCTCTCCTCCACCACCCAAATCATCATTTTCTCAGGCCTCTGATTCAATTACAAAGAACAAATTGAAGTTACCTTTGGTTTCTTTGACCAAATCTTTGCCAAATACACAATTTGATCTTATTCAGAGCGAGAAAATGGTGAATTTCATGATGGATAAGTATATTGTTCCCAGTTTTGTTGTTTCTCTATTGGGGTTCCTTCTTCTTTATGTTTTGCGACCAAGAACCCCCAATTATAAGAAAATGGATCTTAAATCTACCCGAAAATGTGAAACCCACAACGTAATTTCTAGAAAATTGGAGAAAGGGACCGATGCCGATGTTATAATTGTTGGAGCTGGGGTTGCTGGTGCTGCTCTTGCTCATACCCTTGCTAAGGTCTATTCCCAATTGCTTTCTAATTTACGGTTTTCATATTTCTAAAAGTCCCTTTGAAAGAAATGAAAATTTTCTTATCGGCAAGGTCATAATATTGGAATGGAAGGAAGCATGATGAAAAAATTGTATTTGGATACGGAAAATTCCTCTTACTATTATTATGTTTTCCTCACTGTTTTCTGTTTCTTTATACCTGAAATTGCTGCACTTGAGCCGATTGTCTCTTCGAAACAATCTCTCTGTATTAGGTAATGGTAAGGTCCTATGTACACCCTACCCTCGCCAGATCCCACTTGTGGGATTTCATCATTATGTTGTTCTTGTTGGATATGCAAAATCCATGAAAAAAAATCTAAACTTTTAGCTCCCCTCCAAGAGGTCTTTAGAATATGAATTATTTGCATGTATGATACTAGTTCCTTTACTGGGCACTTTATCTTATCAAGAGTTAATTGGACCAACTTTTAGAAATAAATTGTAGATAAATTCATTTTTCCTTTAATGAAAATTGAAATGACCGGAAACCATAGGGAAAGTACTATAAGTTGCAATTCTTCTCGTATCAAAATGATAAAAGAAGACGATCTAATGATGTGGTCTCAATTTCACATAGTTTGAAACTTGGGAAGGGACATAGGCTAAGCATTTCGAGAAGAGGGAGTAGACTATTTTGTTTAATGCAACATACAGGTGCTGTTAATATTCTTATCTTGATGGTAAGTTGTGATCTGTAATGGCTTGCCTTGTCATGGAAAATTTGGTTTTTGATTCCTAACACTTGTGTCCACGAGCAGGAAACAAGAAAATGTTTGTCTAGTGACTTTTACCAATTGTCCTGATCCCCCTTTAGCATCTAAACATTTGTTTTTTGCCACTGCTGCAGGAAGGACGAAATGTTCACGTCATCGAAAGGGATTTGACAGAGCCGGACCGGATTGTTGGCGAATTGCTTCAGCCTGGGGGTTATCTTAAATTGATTG</genome_strand>
        <mrna_strand>TTTTTTTTTATTGTCATCCTCGCAATTTTCACCCAAAATCACACGGTCCAATTGGATCCCCAATTTCGGATTGCGATGCTTCTTATAAATACAAACAATTTCTACCATGCTTTCTCCCTCGTTTTCTCCAAACACAAATTTCCTCTATCTGCAGCCTCTCCTCCACCACCCAAATCATCATTTTCTCAGGCCTCTGATTCAATTACAAAGAACAAATTGAAGTTACCTTTGGTTTCTTTGACCAAATCTTTGCCAAATACACAATTTGATCTTATTCAGAGCGAGAAAATGGTGAATTTCATGATGGATAAGTATATTGTTCCCAGTTTTGTTGTTTCTCTATTGGGGTTCCTTCTTCTTTATGTTTTGCGACCAAGAACCCCCAATTATAAGAAAATGGATCTTAAATCTACCCGAAAATGTGAAACCCACAACGTAATTTCTAGAAAATTGGAGAAAGGGACCGATGCCGATGTTATAATTGTTGGAGCTGGGGTTGCTGGTGCTGCTCTTGCTCATACCCTTGCTAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGACGAAATGTTCACGTCATCGAAAGGGATTTGACAGAGCCGGACCGGATTGTTGGCGAATTGCTTCAGCCTGGGGGTTATCTTAAAATGATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E302912" ref_strand="+" ref_description="SGN-E302912 [cLEW-26-I12]">
      <seq>ttttttttattgtcatcctcgcaattttcacccaaaatcacacggtccaattggatccccaatttcggattgcgatgcttcttataaatacaaacaatttctaccatgctttctccctcgttttctccaaacacaaatttcctctatctgcagcctctcctccaccacccaaatcatcattttctcaggcctctgattcaattacaaagaacaaattgaagttacctttggtttctttgaccaaatctttgccaaatacacaatttgatcttattcagagcgagaaaatggtgaatttcatgatggataagtatattgttcccagttttgttgtttctctattggggttccttcttctttatgttttgcgaccaagaacccccaattataagaaaatggatcttaaatctacccgaaaatgtgaaacccacaacgtaatttctagaaaattggagaaagggaccgatgccgatgttataattgttggagctggggttgctggtgctgctcttgctcatacccttgctaaggaaggacgaaatgttcacgtcatcgaaagggatttgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="79546" stop="97890"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="96140" g_stop="96669" g_length="530"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="530" r_length="530" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="96670" i_stop="97552" i_length="883">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="97553" g_stop="97590" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="531" r_stop="568" r_length="38" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-E302912" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>568</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E302912" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="96140" e_stop="96669"/>
          <exon e_start="97553" e_stop="97590"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTTTTATTGTCATCCTCGCAATTTTCACCCAAAATCACACGGTCCAATTGGATCCCCAATTTCGGATTGCGATGCTTCTTATAAATACAAACAATTTCTACCATGCTTTCTCCCTCGTTTTCTCCAAACACAAATTTCCTCTATCTGCAGCCTCTCCTCCACCACCCAAATCATCATTTTCTCAGGCCTCTGATTCAATTACAAAGAACAAATTGAAGTTACCTTTGGTTTCTTTGACCAAATCTTTGCCAAATACACAATTTGATCTTATTCAGAGCGAGAAAATGGTGAATTTCATGATGGATAAGTATATTGTTCCCAGTTTTGTTGTTTCTCTATTGGGGTTCCTTCTTCTTTATGTTTTGCGACCAAGAACCCCCAATTATAAGAAAATGGATCTTAAATCTACCCGAAAATGTGAAACCCACAACGTAATTTCTAGAAAATTGGAGAAAGGGACCGATGCCGATGTTATAATTGTTGGAGCTGGGGTTGCTGGTGCTGCTCTTGCTCATACCCTTGCTAAGGTCTATTCCCAATTGCTTTCTAATTTACGGTTTTCATATTTCTAAAAGTCCCTTTGAAAGAAATGAAAATTTTCTTATCGGCAAGGTCATAATATTGGAATGGAAGGAAGCATGATGAAAAAATTGTATTTGGATACGGAAAATTCCTCTTACTATTATTATGTTTTCCTCACTGTTTTCTGTTTCTTTATACCTGAAATTGCTGCACTTGAGCCGATTGTCTCTTCGAAACAATCTCTCTGTATTAGGTAATGGTAAGGTCCTATGTACACCCTACCCTCGCCAGATCCCACTTGTGGGATTTCATCATTATGTTGTTCTTGTTGGATATGCAAAATCCATGAAAAAAAATCTAAACTTTTAGCTCCCCTCCAAGAGGTCTTTAGAATATGAATTATTTGCATGTATGATACTAGTTCCTTTACTGGGCACTTTATCTTATCAAGAGTTAATTGGACCAACTTTTAGAAATAAATTGTAGATAAATTCATTTTTCCTTTAATGAAAATTGAAATGACCGGAAACCATAGGGAAAGTACTATAAGTTGCAATTCTTCTCGTATCAAAATGATAAAAGAAGACGATCTAATGATGTGGTCTCAATTTCACATAGTTTGAAACTTGGGAAGGGACATAGGCTAAGCATTTCGAGAAGAGGGAGTAGACTATTTTGTTTAATGCAACATACAGGTGCTGTTAATATTCTTATCTTGATGGTAAGTTGTGATCTGTAATGGCTTGCCTTGTCATGGAAAATTTGGTTTTTGATTCCTAACACTTGTGTCCACGAGCAGGAAACAAGAAAATGTTTGTCTAGTGACTTTTACCAATTGTCCTGATCCCCCTTTAGCATCTAAACATTTGTTTTTTGCCACTGCTGCAGGAAGGACGAAATGTTCACGTCATCGAAAGGGATTTGAC</genome_strand>
        <mrna_strand>TTTTTTTTATTGTCATCCTCGCAATTTTCACCCAAAATCACACGGTCCAATTGGATCCCCAATTTCGGATTGCGATGCTTCTTATAAATACAAACAATTTCTACCATGCTTTCTCCCTCGTTTTCTCCAAACACAAATTTCCTCTATCTGCAGCCTCTCCTCCACCACCCAAATCATCATTTTCTCAGGCCTCTGATTCAATTACAAAGAACAAATTGAAGTTACCTTTGGTTTCTTTGACCAAATCTTTGCCAAATACACAATTTGATCTTATTCAGAGCGAGAAAATGGTGAATTTCATGATGGATAAGTATATTGTTCCCAGTTTTGTTGTTTCTCTATTGGGGTTCCTTCTTCTTTATGTTTTGCGACCAAGAACCCCCAATTATAAGAAAATGGATCTTAAATCTACCCGAAAATGTGAAACCCACAACGTAATTTCTAGAAAATTGGAGAAAGGGACCGATGCCGATGTTATAATTGTTGGAGCTGGGGTTGCTGGTGCTGCTCTTGCTCATACCCTTGCTAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGACGAAATGTTCACGTCATCGAAAGGGATTTGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E329185" ref_strand="+" ref_description="SGN-E329185 [cTOD-2-L23]">
      <seq>tctgcagcctctcctccaccacccaaatcatcattttctcaggcctctgattcaattacaaagaacaaattgaagttacctttggtttctttgaccaaatctttgccaaatacacaatttgatcttattcagagcgagaaaatggtgaatttcatgatggataagtatattgttcccagttttgttgtttctctattggggttccttcttctttatgttttgcgaccaagaacccccaattataagaaaatggatcttaaatctacccgaaaatgtgaaacccacaacgtaatttctagaaaattggagaaagggaccgatgccgatgttataattgttggagctggggttgctggtgctgctcttgctcatacccttgctaaggaaggacgaaatgttcacgtcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="79692" stop="97875"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="96286" g_stop="96669" g_length="384"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="384" r_length="384" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="96670" i_stop="97552" i_length="883">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="97553" g_stop="97575" g_length="23"/>
          <reference_exon_boundary r_type="cDNA" r_start="385" r_stop="407" r_length="23" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-E329185" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>407</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E329185" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="96286" e_stop="96669"/>
          <exon e_start="97553" e_stop="97575"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTGCAGCCTCTCCTCCACCACCCAAATCATCATTTTCTCAGGCCTCTGATTCAATTACAAAGAACAAATTGAAGTTACCTTTGGTTTCTTTGACCAAATCTTTGCCAAATACACAATTTGATCTTATTCAGAGCGAGAAAATGGTGAATTTCATGATGGATAAGTATATTGTTCCCAGTTTTGTTGTTTCTCTATTGGGGTTCCTTCTTCTTTATGTTTTGCGACCAAGAACCCCCAATTATAAGAAAATGGATCTTAAATCTACCCGAAAATGTGAAACCCACAACGTAATTTCTAGAAAATTGGAGAAAGGGACCGATGCCGATGTTATAATTGTTGGAGCTGGGGTTGCTGGTGCTGCTCTTGCTCATACCCTTGCTAAGGTCTATTCCCAATTGCTTTCTAATTTACGGTTTTCATATTTCTAAAAGTCCCTTTGAAAGAAATGAAAATTTTCTTATCGGCAAGGTCATAATATTGGAATGGAAGGAAGCATGATGAAAAAATTGTATTTGGATACGGAAAATTCCTCTTACTATTATTATGTTTTCCTCACTGTTTTCTGTTTCTTTATACCTGAAATTGCTGCACTTGAGCCGATTGTCTCTTCGAAACAATCTCTCTGTATTAGGTAATGGTAAGGTCCTATGTACACCCTACCCTCGCCAGATCCCACTTGTGGGATTTCATCATTATGTTGTTCTTGTTGGATATGCAAAATCCATGAAAAAAAATCTAAACTTTTAGCTCCCCTCCAAGAGGTCTTTAGAATATGAATTATTTGCATGTATGATACTAGTTCCTTTACTGGGCACTTTATCTTATCAAGAGTTAATTGGACCAACTTTTAGAAATAAATTGTAGATAAATTCATTTTTCCTTTAATGAAAATTGAAATGACCGGAAACCATAGGGAAAGTACTATAAGTTGCAATTCTTCTCGTATCAAAATGATAAAAGAAGACGATCTAATGATGTGGTCTCAATTTCACATAGTTTGAAACTTGGGAAGGGACATAGGCTAAGCATTTCGAGAAGAGGGAGTAGACTATTTTGTTTAATGCAACATACAGGTGCTGTTAATATTCTTATCTTGATGGTAAGTTGTGATCTGTAATGGCTTGCCTTGTCATGGAAAATTTGGTTTTTGATTCCTAACACTTGTGTCCACGAGCAGGAAACAAGAAAATGTTTGTCTAGTGACTTTTACCAATTGTCCTGATCCCCCTTTAGCATCTAAACATTTGTTTTTTGCCACTGCTGCAGGAAGGACGAAATGTTCACGTCAT</genome_strand>
        <mrna_strand>TCTGCAGCCTCTCCTCCACCACCCAAATCATCATTTTCTCAGGCCTCTGATTCAATTACAAAGAACAAATTGAAGTTACCTTTGGTTTCTTTGACCAAATCTTTGCCAAATACACAATTTGATCTTATTCAGAGCGAGAAAATGGTGAATTTCATGATGGATAAGTATATTGTTCCCAGTTTTGTTGTTTCTCTATTGGGGTTCCTTCTTCTTTATGTTTTGCGACCAAGAACCCCCAATTATAAGAAAATGGATCTTAAATCTACCCGAAAATGTGAAACCCACAACGTAATTTCTAGAAAATTGGAGAAAGGGACCGATGCCGATGTTATAATTGTTGGAGCTGGGGTTGCTGGTGCTGCTCTTGCTCATACCCTTGCTAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGACGAAATGTTCACGTCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E746114" ref_strand="+" ref_description="SGN-E746114 [GI|47104940]">
      <seq>gaccaaatctttgccaaatacacaatttgatcttattcagagcgagaaaatggtgaatttcatgatggataagtatattgttcccagttttgttgtttctctattggggttccttcttctttatgttttgcgaccaagaacccccaattataagaaaatggatcttaaatctacccgaaaatgtgaaacccacaacgtaatttctagaaaattggagaaagggaccgatgccgatgttataattgttggagctggggttgctggtgctgctcttgctcatacccttgctaaggaaggacgaaatgttcacgtcatcgaaagggatttgacagagccggaccggattgttggcgaattgcttcagcctgggggttatcttaaattgattgagttgggcattgaagattgtgttgaggatattgatgcccagcgggtggttggatatgctcttttcaaggatggaaagagcacaaatgtttcctatcccttgaaaaacttccattcggatgtggctgggagaagctttcacaatgggcgcttcatacagaagatgagagaaaaagcagctactcttcccaatgtacgattggaacaaggcaccgtaacatccctgattgaagaaaatggatccattaagggtgttcagtacaaaactaaggctggccaagaacttaaagcacatgctcctcttacagtagtttgtgatgggtgcttctcaaacttgcgacgctcgctttgtgaccctaaggttgatgttccctcttgctttgttggtctggtattggaattggagaatgatcgacttccatacccaaaccatgggcatgttattctggcagatccttctcccatcttattttatcctatcagtagcacggaaattcgctgcttggtcgatgtacctggtcaaaagcttccttctcttgctaatggtgatatggcaaattatttgaaaactatggtagctccccaggtaccacctgagctacgtgatgcgtttctatctgcaattgataaggggcatattaaaactatgccaaacaggagcatgccagctgctccctatcctacacctggagctctgttgctaggcgattctttcaacatgcgccatccattaactggtgggggaatgactgttgcgctttcagacattgcagtattaaggaatcttcttatgccattgcaagacctgaatgacgcagatgagttgtgtaaatatctggagtcattttatactttgcgcaagccagtggcttccaccataaatactttggctggagctctgtataaggtgttctgtgcttctcctgatcaagcgaggagggagatgcgagatgcgtgttttgactatttgagccttggaggcacttgttcaactggacctgtagctctactctctggtcttgatcctaatccaatgagcttggtgctccatttctttgcagtggccgtttatggagttggtcgtttacttgtaccttttccttctccaaagaagttgtggatcggagctaaattaatattgtctgcatcaggcatcatatttcccatcataaaggcagaagggatccggcaaatgttctttccaacaacaataccagcatatcacagagctcctcccgtgaagacggagtcagattaagcagaaaatttgttgaagttttgttccatgaatagcattaacatttttgcagttcctttctcgaagcacgaaatgtaagttccactctcccctcaccccaaaccctacaatagaataagaatgacgacgaaaccttattgtaggcatattataccaaaaggaacttcaagtgtacgtattcattgaaatctaccttattgtaggcatattataccaaaaggaacttcaagtgtacgtattcatttaaatctagtcagactccctactctgtagaaatgtatattgtggcattcactttatatcttagagagttcaatttgtacgttaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="79784" stop="101164"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="96378" g_stop="96669" g_length="292"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="292" r_length="292" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="96670" i_stop="97552" i_length="883">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="97553" g_stop="97664" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="293" r_stop="404" r_length="112" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="97665" i_stop="98270" i_length="606">
            <donor d_prob="0.191" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98271" g_stop="98445" g_length="175"/>
          <reference_exon_boundary r_type="cDNA" r_start="405" r_stop="579" r_length="175" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="98446" i_stop="98641" i_length="196">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98642" g_stop="98810" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="580" r_stop="748" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="98811" i_stop="98978" i_length="168">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.957" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="98979" g_stop="99203" g_length="225"/>
          <reference_exon_boundary r_type="cDNA" r_start="749" r_stop="973" r_length="225" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="99204" i_stop="99389" i_length="186">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="99390" g_stop="99665" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="974" r_stop="1249" r_length="276" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="99666" i_stop="99982" i_length="317">
            <donor d_prob="0.911" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="99983" g_stop="100261" g_length="279"/>
          <reference_exon_boundary r_type="cDNA" r_start="1250" r_stop="1528" r_length="279" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="100262" i_stop="100419" i_length="158">
            <donor d_prob="0.935" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="100420" g_stop="100864" g_length="445"/>
          <reference_exon_boundary r_type="cDNA" r_start="1529" r_stop="1972" r_length="444" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1973" polyA_stop="1986"/>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-E746114" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1973</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E746114" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="96378" e_stop="96669"/>
          <exon e_start="97553" e_stop="97664"/>
          <exon e_start="98271" e_stop="98445"/>
          <exon e_start="98642" e_stop="98810"/>
          <exon e_start="98979" e_stop="99203"/>
          <exon e_start="99390" e_stop="99665"/>
          <exon e_start="99983" e_stop="100261"/>
          <exon e_start="100420" e_stop="100864"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACCAAATCTTTGCCAAATACACAATTTGATCTTATTCAGAGCGAGAAAATGGTGAATTTCATGATGGATAAGTATATTGTTCCCAGTTTTGTTGTTTCTCTATTGGGGTTCCTTCTTCTTTATGTTTTGCGACCAAGAACCCCCAATTATAAGAAAATGGATCTTAAATCTACCCGAAAATGTGAAACCCACAACGTAATTTCTAGAAAATTGGAGAAAGGGACCGATGCCGATGTTATAATTGTTGGAGCTGGGGTTGCTGGTGCTGCTCTTGCTCATACCCTTGCTAAGGTCTATTCCCAATTGCTTTCTAATTTACGGTTTTCATATTTCTAAAAGTCCCTTTGAAAGAAATGAAAATTTTCTTATCGGCAAGGTCATAATATTGGAATGGAAGGAAGCATGATGAAAAAATTGTATTTGGATACGGAAAATTCCTCTTACTATTATTATGTTTTCCTCACTGTTTTCTGTTTCTTTATACCTGAAATTGCTGCACTTGAGCCGATTGTCTCTTCGAAACAATCTCTCTGTATTAGGTAATGGTAAGGTCCTATGTACACCCTACCCTCGCCAGATCCCACTTGTGGGATTTCATCATTATGTTGTTCTTGTTGGATATGCAAAATCCATGAAAAAAAATCTAAACTTTTAGCTCCCCTCCAAGAGGTCTTTAGAATATGAATTATTTGCATGTATGATACTAGTTCCTTTACTGGGCACTTTATCTTATCAAGAGTTAATTGGACCAACTTTTAGAAATAAATTGTAGATAAATTCATTTTTCCTTTAATGAAAATTGAAATGACCGGAAACCATAGGGAAAGTACTATAAGTTGCAATTCTTCTCGTATCAAAATGATAAAAGAAGACGATCTAATGATGTGGTCTCAATTTCACATAGTTTGAAACTTGGGAAGGGACATAGGCTAAGCATTTCGAGAAGAGGGAGTAGACTATTTTGTTTAATGCAACATACAGGTGCTGTTAATATTCTTATCTTGATGGTAAGTTGTGATCTGTAATGGCTTGCCTTGTCATGGAAAATTTGGTTTTTGATTCCTAACACTTGTGTCCACGAGCAGGAAACAAGAAAATGTTTGTCTAGTGACTTTTACCAATTGTCCTGATCCCCCTTTAGCATCTAAACATTTGTTTTTTGCCACTGCTGCAGGAAGGACGAAATGTTCACGTCATCGAAAGGGATTTGACAGAGCCGGACCGGATTGTTGGCGAATTGCTTCAGCCTGGGGGTTATCTTAAATTGATTGAGTTGGGCATTGAAGGTTTGTCTAAAAAAAAGAAAAAAAAAACAAAATCAAACAAGCATAAGAGCTTACAATTGATCATTTTGTGATAGAGCTGGTAGGCACAAGATATACTCCCTCCGTTCACTTTATTTGTCCACCATACAAAAAACGAATTTTCACTTTTGCTTGTTACTTTTAGCATATCAATAGAAGTACATATTTTTTTCATGTTTTGTCCTCAACATGTATTACTTATTCTCAAAACATTTCCCTAGACCTAAGACTATACATCTATTCATATGGGTATTTTGGCAAAAGTTACTCATATTAACCATTGTTTCTAAAGAGCGTGCAAAGACCAAAGTGGACAATTAAAAGTGAACGGTGGGAGTATTTTACTATAGTATTTGAAATAAGTTGTAGTTTTAACTTGGGTTGCATGGACTCTTCACTTTCAATGCCGCACCCGTGTTGGATTCTCTAAAATACGCTACTTTTGGAAAATGCGACACACCCATTGATATTTTTGAAGAGTCCAAGCTACGTAGTTTTTAACTTGATTAGGATATAGAATTCACTTTTCGTTGTACTATTCTAGGTTTGCGTAATTTTGTGCTCTTGACGTTTGCCATTGTAATGCAGATTGTGTTGAGGATATTGATGCCCAGCGGGTGGTTGGATATGCTCTTTTCAAGGATGGAAAGAGCACAAATGTTTCCTATCCCTTGAAAAACTTCCATTCGGATGTGGCTGGGAGAAGCTTTCACAATGGGCGCTTCATACAGAAGATGAGAGAAAAAGCAGCTACTCTTCCCAAGTAAGCTTACCCATGCAGTATTATTTATTAGAACTGTTTTCGACACATCATATTAATCTTTCCTTATTAATAAAAAGAACTGTCTAGACACATTTCATGCTTTTAGTAATTGATACAATCATGTAATTGTAATTATCCTTTTGCTTATCATAGTTGCAAATAATCAATTGACTGGTTTTTATTAAATTATGTACAGTGTACGATTGGAACAAGGCACCGTAACATCCCTGATTGAAGAAAATGGATCCATTAAGGGTGTTCAGTACAAAACTAAGGCTGGCCAAGAACTTAAAGCACATGCTCCTCTTACAGTAGTTTGTGATGGGTGCTTCTCAAACTTGCGACGCTCGCTTTGTGACCCTAAGGTGAAGTTAATACCACTAAACATGTCAGTTGATTTGTTTCTGTAGTGTCATATGCACACATCAGGTCAAGTAAAACCTTCATATGCCTGGTGATATATGTTACCTGCACCGAGTTTGGAAAATTTAGATCTTGAAACTTATTGTAAGTGCGAGTATTGACATGTGCAGGTTGATGTTCCCTCTTGCTTTGTTGGTCTGGTATTGGAATTGGAGAATGATCGACTTCCATACCCAAACCATGGGCATGTTATTCTGGCAGATCCTTCTCCCATCTTATTTTATCCTATCAGTAGCACGGAAATTCGCTGCTTGGTCGATGTACCTGGTCAAAAGCTTCCTTCTCTTGCTAATGGTGATATGGCAAATTATTTGAAAACTATGGTAGCTCCCCAGGTACGTACAGTTTCCCTGCATGGTACTATTTTTATTTTTCTTAACTTTAGAATATAGTCATACACACAGCCAGTATAAAAAGTCTGTCCTTGTTTTTTCTACCTCACATACAATTGCCTGTTCCTAAAGATAGCTATTTGGTTCCTCCCAATGTGCCACCATGATGGTATCTTTACATTTTTTCAGGTACCACCTGAGCTACGTGATGCGTTTCTATCTGCAATTGATAAGGGGCATATTAAAACTATGCCAAACAGGAGCATGCCAGCTGCTCCCTATCCTACACCTGGAGCTCTGTTGCTAGGCGATTCTTTCAACATGCGCCATCCATTAACTGGTGGGGGAATGACTGTTGCGCTTTCAGACATTGCAGTATTAAGGAATCTTCTTATGCCATTGCAAGACCTGAATGACGCAGATGAGTTGTGTAAATATCTGGAGTCATTTTATACTTTGCGCAAGGTAAAGCTAAAACTGTTGTCTGGATAACACTATCATCGGTTGAATGATTTGCAATATGTGTTGTGGCTTATTTAAAAAAATATTTTATTTCAGCTTTTTGATCAAGTGTAGGGAGAACCTTCTTTCTAGCAATTTGACGTGGCATATGATGTCTTTTATCTCTACATAAAAATCATACGTTATTCGAAGCAGTTTTAATGTCTAAAACTGCATCACTTTTTTTAGTGCTATTCCCTCTAAAAGAATACAAACTAACAGAACTGGATTTCTGACTTTATTAGCCTGTTACTTATTCTTGTATTGGTCTCTGTTTTCAGCCAGTGGCTTCCACCATAAATACTTTGGCTGGAGCTCTGTATAAGGTGTTCTGTGCTTCTCCTGATCAAGCGAGGAGGGAGATGCGAGATGCGTGTTTTGACTATTTGAGCCTTGGAGGCACTTGTTCAACTGGACCTGTAGCTCTACTCTCTGGTCTTGATCCTAATCCAATGAGCTTGGTGCTCCATTTCTTTGCAGTGGCCGTTTATGGAGTTGGTCGTTTACTTGTACCTTTTCCTTCTCCAAAGAAGTTGTGGATCGGAGCTAAATTAATATTGGTATGTACCTTAAATGTAGTATTCAAACTGTCTTCGTTGACTCTGAGCATGTGTGTGTTATATATTGAGCTACTTTCCAGTTGAAATTCCTACATACTCGTTCACCTTGTTTGAAAGTCTTGACCATTTTGGCATGCATGCTCTTTTTTTTTGTTCAGTCTGCATCAGGCATCATATTTCCCATCATAAAGGCAGAAGGGATCCGGCAAATGTTCTTTCCAACAACAATACCAGCATATCACAGAGCTCCTCCCGTGAAGACGGAGTCAGATTAAGCAGAAAATTTGTTGAAGTTTTGTTCCATGAATAGCATTAACATTTTTGCAGTTCCTTTCTCGAAGCACGAAATGTAAGTTCCACTCTCCCCTCACCCCAAACCCTACAAATAGAATAAGAATGACGACGAAACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTGAAATCTACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTTAAATCTAGTCAGACTCCCTACTCTGTAGAAATGTATATTGTGGCATTCACTTTATATCTTAGAGAGTTCAATTTGTACGTCA</genome_strand>
        <mrna_strand>GACCAAATCTTTGCCAAATACACAATTTGATCTTATTCAGAGCGAGAAAATGGTGAATTTCATGATGGATAAGTATATTGTTCCCAGTTTTGTTGTTTCTCTATTGGGGTTCCTTCTTCTTTATGTTTTGCGACCAAGAACCCCCAATTATAAGAAAATGGATCTTAAATCTACCCGAAAATGTGAAACCCACAACGTAATTTCTAGAAAATTGGAGAAAGGGACCGATGCCGATGTTATAATTGTTGGAGCTGGGGTTGCTGGTGCTGCTCTTGCTCATACCCTTGCTAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGACGAAATGTTCACGTCATCGAAAGGGATTTGACAGAGCCGGACCGGATTGTTGGCGAATTGCTTCAGCCTGGGGGTTATCTTAAATTGATTGAGTTGGGCATTGAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTGTTGAGGATATTGATGCCCAGCGGGTGGTTGGATATGCTCTTTTCAAGGATGGAAAGAGCACAAATGTTTCCTATCCCTTGAAAAACTTCCATTCGGATGTGGCTGGGAGAAGCTTTCACAATGGGCGCTTCATACAGAAGATGAGAGAAAAAGCAGCTACTCTTCCCAA....................................................................................................................................................................................................TGTACGATTGGAACAAGGCACCGTAACATCCCTGATTGAAGAAAATGGATCCATTAAGGGTGTTCAGTACAAAACTAAGGCTGGCCAAGAACTTAAAGCACATGCTCCTCTTACAGTAGTTTGTGATGGGTGCTTCTCAAACTTGCGACGCTCGCTTTGTGACCCTAAG........................................................................................................................................................................GTTGATGTTCCCTCTTGCTTTGTTGGTCTGGTATTGGAATTGGAGAATGATCGACTTCCATACCCAAACCATGGGCATGTTATTCTGGCAGATCCTTCTCCCATCTTATTTTATCCTATCAGTAGCACGGAAATTCGCTGCTTGGTCGATGTACCTGGTCAAAAGCTTCCTTCTCTTGCTAATGGTGATATGGCAAATTATTTGAAAACTATGGTAGCTCCCCAG..........................................................................................................................................................................................GTACCACCTGAGCTACGTGATGCGTTTCTATCTGCAATTGATAAGGGGCATATTAAAACTATGCCAAACAGGAGCATGCCAGCTGCTCCCTATCCTACACCTGGAGCTCTGTTGCTAGGCGATTCTTTCAACATGCGCCATCCATTAACTGGTGGGGGAATGACTGTTGCGCTTTCAGACATTGCAGTATTAAGGAATCTTCTTATGCCATTGCAAGACCTGAATGACGCAGATGAGTTGTGTAAATATCTGGAGTCATTTTATACTTTGCGCAAG.............................................................................................................................................................................................................................................................................................................................CCAGTGGCTTCCACCATAAATACTTTGGCTGGAGCTCTGTATAAGGTGTTCTGTGCTTCTCCTGATCAAGCGAGGAGGGAGATGCGAGATGCGTGTTTTGACTATTTGAGCCTTGGAGGCACTTGTTCAACTGGACCTGTAGCTCTACTCTCTGGTCTTGATCCTAATCCAATGAGCTTGGTGCTCCATTTCTTTGCAGTGGCCGTTTATGGAGTTGGTCGTTTACTTGTACCTTTTCCTTCTCCAAAGAAGTTGTGGATCGGAGCTAAATTAATATTG..............................................................................................................................................................TCTGCATCAGGCATCATATTTCCCATCATAAAGGCAGAAGGGATCCGGCAAATGTTCTTTCCAACAACAATACCAGCATATCACAGAGCTCCTCCCGTGAAGACGGAGTCAGATTAAGCAGAAAATTTGTTGAAGTTTTGTTCCATGAATAGCATTAACATTTTTGCAGTTCCTTTCTCGAAGCACGAAATGTAAGTTCCACTCTCCCCTCACCCCAAACCCTAC-AATAGAATAAGAATGACGACGAAACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTGAAATCTACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTTAAATCTAGTCAGACTCCCTACTCTGTAGAAATGTATATTGTGGCATTCACTTTATATCTTAGAGAGTTCAATTTGTACGTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E727571" ref_strand="+" ref_description="SGN-E727571 [LA15AD04]">
      <seq>tgtgttgaggatattgatgcccagcgggtggttggatatgctcttttcaaggatggaaagagcacaaatgtttcctatcccttgaaaaacttccattcggatgtggctgggagaagctttcacaatgggcgcttcatacagaagatgagagaaaaagcagctactcttcccaatgtacgattggaacaaggcaccgtaacatccctgattgaagaaaatggatccattaagggtgttcagtacaaaactaaggctggccaagaacttaaagcacatgctcctcttacagtagtttgtgatgggtgcttctcaaacttgcgacgctcgctttgtgaccctaaggttgatgttccctcttgctttgttggtctggtattggaattggagaatgatcgacttccatacccaaaccatgggcatgttattctggcagatccttctcccatcttattttatcctatcagtagcacggaaattcgctgcttggtcgatgtacctggtcaaaagcttccttctcttgctaatggtgatatggcaaattatttgaaaactatggtagctccccaggtaccacctgagctacgtgatgcgtttctatctgcaattgataaggggcatattaaaactatgccaaacaggagcatgccagctgctccctatcctacacctggagctctgttgctaggcgattctttcaacatgcgccatccattaactggtgggggaatgactgttgcgctttcagacattgcagtattaaagaatcttcttatgccattgcnagacctgaatgacgcagatgagttgtgtaaatatctggagtcattttatactttgcgcaagccagtggcttccaccataaatactt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="81679" stop="100307"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98273" g_stop="98445" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="173" r_length="173" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98446" i_stop="98641" i_length="196">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98642" g_stop="98810" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="174" r_stop="342" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98811" i_stop="98978" i_length="168">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.957" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98979" g_stop="99203" g_length="225"/>
          <reference_exon_boundary r_type="cDNA" r_start="343" r_stop="567" r_length="225" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="99204" i_stop="99389" i_length="186">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="99390" g_stop="99665" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="568" r_stop="843" r_length="276" r_score="0.993"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="99666" i_stop="99982" i_length="317">
            <donor d_prob="0.911" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="99983" g_stop="100007" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="844" r_stop="868" r_length="25" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-E727571" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>868</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E727571" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98273" e_stop="98445"/>
          <exon e_start="98642" e_stop="98810"/>
          <exon e_start="98979" e_stop="99203"/>
          <exon e_start="99390" e_stop="99665"/>
          <exon e_start="99983" e_stop="100007"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTGTTGAGGATATTGATGCCCAGCGGGTGGTTGGATATGCTCTTTTCAAGGATGGAAAGAGCACAAATGTTTCCTATCCCTTGAAAAACTTCCATTCGGATGTGGCTGGGAGAAGCTTTCACAATGGGCGCTTCATACAGAAGATGAGAGAAAAAGCAGCTACTCTTCCCAAGTAAGCTTACCCATGCAGTATTATTTATTAGAACTGTTTTCGACACATCATATTAATCTTTCCTTATTAATAAAAAGAACTGTCTAGACACATTTCATGCTTTTAGTAATTGATACAATCATGTAATTGTAATTATCCTTTTGCTTATCATAGTTGCAAATAATCAATTGACTGGTTTTTATTAAATTATGTACAGTGTACGATTGGAACAAGGCACCGTAACATCCCTGATTGAAGAAAATGGATCCATTAAGGGTGTTCAGTACAAAACTAAGGCTGGCCAAGAACTTAAAGCACATGCTCCTCTTACAGTAGTTTGTGATGGGTGCTTCTCAAACTTGCGACGCTCGCTTTGTGACCCTAAGGTGAAGTTAATACCACTAAACATGTCAGTTGATTTGTTTCTGTAGTGTCATATGCACACATCAGGTCAAGTAAAACCTTCATATGCCTGGTGATATATGTTACCTGCACCGAGTTTGGAAAATTTAGATCTTGAAACTTATTGTAAGTGCGAGTATTGACATGTGCAGGTTGATGTTCCCTCTTGCTTTGTTGGTCTGGTATTGGAATTGGAGAATGATCGACTTCCATACCCAAACCATGGGCATGTTATTCTGGCAGATCCTTCTCCCATCTTATTTTATCCTATCAGTAGCACGGAAATTCGCTGCTTGGTCGATGTACCTGGTCAAAAGCTTCCTTCTCTTGCTAATGGTGATATGGCAAATTATTTGAAAACTATGGTAGCTCCCCAGGTACGTACAGTTTCCCTGCATGGTACTATTTTTATTTTTCTTAACTTTAGAATATAGTCATACACACAGCCAGTATAAAAAGTCTGTCCTTGTTTTTTCTACCTCACATACAATTGCCTGTTCCTAAAGATAGCTATTTGGTTCCTCCCAATGTGCCACCATGATGGTATCTTTACATTTTTTCAGGTACCACCTGAGCTACGTGATGCGTTTCTATCTGCAATTGATAAGGGGCATATTAAAACTATGCCAAACAGGAGCATGCCAGCTGCTCCCTATCCTACACCTGGAGCTCTGTTGCTAGGCGATTCTTTCAACATGCGCCATCCATTAACTGGTGGGGGAATGACTGTTGCGCTTTCAGACATTGCAGTATTAAGGAATCTTCTTATGCCATTGCAAGACCTGAATGACGCAGATGAGTTGTGTAAATATCTGGAGTCATTTTATACTTTGCGCAAGGTAAAGCTAAAACTGTTGTCTGGATAACACTATCATCGGTTGAATGATTTGCAATATGTGTTGTGGCTTATTTAAAAAAATATTTTATTTCAGCTTTTTGATCAAGTGTAGGGAGAACCTTCTTTCTAGCAATTTGACGTGGCATATGATGTCTTTTATCTCTACATAAAAATCATACGTTATTCGAAGCAGTTTTAATGTCTAAAACTGCATCACTTTTTTTAGTGCTATTCCCTCTAAAAGAATACAAACTAACAGAACTGGATTTCTGACTTTATTAGCCTGTTACTTATTCTTGTATTGGTCTCTGTTTTCAGCCAGTGGCTTCCACCATAAATACTT</genome_strand>
        <mrna_strand>TGTGTTGAGGATATTGATGCCCAGCGGGTGGTTGGATATGCTCTTTTCAAGGATGGAAAGAGCACAAATGTTTCCTATCCCTTGAAAAACTTCCATTCGGATGTGGCTGGGAGAAGCTTTCACAATGGGCGCTTCATACAGAAGATGAGAGAAAAAGCAGCTACTCTTCCCAA....................................................................................................................................................................................................TGTACGATTGGAACAAGGCACCGTAACATCCCTGATTGAAGAAAATGGATCCATTAAGGGTGTTCAGTACAAAACTAAGGCTGGCCAAGAACTTAAAGCACATGCTCCTCTTACAGTAGTTTGTGATGGGTGCTTCTCAAACTTGCGACGCTCGCTTTGTGACCCTAAG........................................................................................................................................................................GTTGATGTTCCCTCTTGCTTTGTTGGTCTGGTATTGGAATTGGAGAATGATCGACTTCCATACCCAAACCATGGGCATGTTATTCTGGCAGATCCTTCTCCCATCTTATTTTATCCTATCAGTAGCACGGAAATTCGCTGCTTGGTCGATGTACCTGGTCAAAAGCTTCCTTCTCTTGCTAATGGTGATATGGCAAATTATTTGAAAACTATGGTAGCTCCCCAG..........................................................................................................................................................................................GTACCACCTGAGCTACGTGATGCGTTTCTATCTGCAATTGATAAGGGGCATATTAAAACTATGCCAAACAGGAGCATGCCAGCTGCTCCCTATCCTACACCTGGAGCTCTGTTGCTAGGCGATTCTTTCAACATGCGCCATCCATTAACTGGTGGGGGAATGACTGTTGCGCTTTCAGACATTGCAGTATTAAAGAATCTTCTTATGCCATTGCNAGACCTGAATGACGCAGATGAGTTGTGTAAATATCTGGAGTCATTTTATACTTTGCGCAAG.............................................................................................................................................................................................................................................................................................................................CCAGTGGCTTCCACCATAAATACTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E726085" ref_strand="+" ref_description="SGN-E726085 [LA10BB02]">
      <seq>tgtgttgaggatattgatgcccagcgggtggttggatatgctcttttcaaggatggaaagagcacaaatgtttcctatcccttgaaaaacttccattcggatgtggctgggagaagctttcacaatgggcgcttcatacagaagatgagagaaaaagcagctactcttcccaatgtacgattggaacaaggcaccgtaacatccctgattgaagaaaatggatccattaagggtgttcagtacaaaactaaggctggccaagaacttaaagcacatgctcctcttacagtagtttgtgatgggtgcttctcaaacttgcgacgctcgctttgtgaccctaaggttgatgttccctcttgctttgttggtctggtattggaattggagaatgatcgacttccatacccaaaccatgggcatgttattctggcagatccttctcccatcttattttatcctatcagtagcacggnaattcgctgcttggtcgatgtacctggtcaaaagcttccttctcttgctaatggtgatatgggcaattatttgaaaactatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="81679" stop="99491"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98273" g_stop="98445" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="173" r_length="173" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98446" i_stop="98641" i_length="196">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98642" g_stop="98810" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="174" r_stop="342" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98811" i_stop="98978" i_length="168">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.957" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98979" g_stop="99191" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="343" r_stop="555" r_length="213" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-E726085" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>555</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E726085" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98273" e_stop="98445"/>
          <exon e_start="98642" e_stop="98810"/>
          <exon e_start="98979" e_stop="99191"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTGTTGAGGATATTGATGCCCAGCGGGTGGTTGGATATGCTCTTTTCAAGGATGGAAAGAGCACAAATGTTTCCTATCCCTTGAAAAACTTCCATTCGGATGTGGCTGGGAGAAGCTTTCACAATGGGCGCTTCATACAGAAGATGAGAGAAAAAGCAGCTACTCTTCCCAAGTAAGCTTACCCATGCAGTATTATTTATTAGAACTGTTTTCGACACATCATATTAATCTTTCCTTATTAATAAAAAGAACTGTCTAGACACATTTCATGCTTTTAGTAATTGATACAATCATGTAATTGTAATTATCCTTTTGCTTATCATAGTTGCAAATAATCAATTGACTGGTTTTTATTAAATTATGTACAGTGTACGATTGGAACAAGGCACCGTAACATCCCTGATTGAAGAAAATGGATCCATTAAGGGTGTTCAGTACAAAACTAAGGCTGGCCAAGAACTTAAAGCACATGCTCCTCTTACAGTAGTTTGTGATGGGTGCTTCTCAAACTTGCGACGCTCGCTTTGTGACCCTAAGGTGAAGTTAATACCACTAAACATGTCAGTTGATTTGTTTCTGTAGTGTCATATGCACACATCAGGTCAAGTAAAACCTTCATATGCCTGGTGATATATGTTACCTGCACCGAGTTTGGAAAATTTAGATCTTGAAACTTATTGTAAGTGCGAGTATTGACATGTGCAGGTTGATGTTCCCTCTTGCTTTGTTGGTCTGGTATTGGAATTGGAGAATGATCGACTTCCATACCCAAACCATGGGCATGTTATTCTGGCAGATCCTTCTCCCATCTTATTTTATCCTATCAGTAGCACGGAAATTCGCTGCTTGGTCGATGTACCTGGTCAAAAGCTTCCTTCTCTTGCTAATGGTGATATGGCAAATTATTTGAAAACTATG</genome_strand>
        <mrna_strand>TGTGTTGAGGATATTGATGCCCAGCGGGTGGTTGGATATGCTCTTTTCAAGGATGGAAAGAGCACAAATGTTTCCTATCCCTTGAAAAACTTCCATTCGGATGTGGCTGGGAGAAGCTTTCACAATGGGCGCTTCATACAGAAGATGAGAGAAAAAGCAGCTACTCTTCCCAA....................................................................................................................................................................................................TGTACGATTGGAACAAGGCACCGTAACATCCCTGATTGAAGAAAATGGATCCATTAAGGGTGTTCAGTACAAAACTAAGGCTGGCCAAGAACTTAAAGCACATGCTCCTCTTACAGTAGTTTGTGATGGGTGCTTCTCAAACTTGCGACGCTCGCTTTGTGACCCTAAG........................................................................................................................................................................GTTGATGTTCCCTCTTGCTTTGTTGGTCTGGTATTGGAATTGGAGAATGATCGACTTCCATACCCAAACCATGGGCATGTTATTCTGGCAGATCCTTCTCCCATCTTATTTTATCCTATCAGTAGCACGGNAATTCGCTGCTTGGTCGATGTACCTGGTCAAAAGCTTCCTTCTCTTGCTAATGGTGATATGGGCAATTATTTGAAAACTATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E325177" ref_strand="+" ref_description="SGN-E325177 [cTOC-13-F12]">
      <seq>tgatgcccagcgggtggttggatatgctcttttcaaggatggaaagagcacaaatgtttcctatcccttgaaaaacttccattcggatgtggctgggagaagctttcacaatgggcgcttcataccagaagatgagagaaaaagcagctactcttcccaatgtacgattggaacaaggcaccgtaaccatccctgattgaagaaaatggatccattaagggtgttcagtacaaaactaaggctggccaagaacttaaagcacatgcctcctcttaccagtagtttgtgatgggtgccttctcaaacttgcgacgctcgctttgtgaccctaaggttgatgttccctcttgctttgttggtctggtattggaattggagaatgatcgacttccatacccaaaccatgggcatgttattctggcagatccttctcccatcttattttatcctatcagtagcacggaaattcgctgcttggtcgatgtacctggtcaaaagcttccttctcttgctaatggtgatatggcaaattatttgaaaacta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="81693" stop="99489"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98287" g_stop="98445" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="160" r_length="160" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98446" i_stop="98641" i_length="196">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.993" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98642" g_stop="98810" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="161" r_stop="333" r_length="173" r_score="0.953"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98811" i_stop="98978" i_length="168">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.957" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98979" g_stop="99189" g_length="211"/>
          <reference_exon_boundary r_type="cDNA" r_start="334" r_stop="544" r_length="211" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-E325177" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>539</cumulative_length_of_scored_exons>
        <coverage percentage="0.991" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E325177" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98287" e_stop="98445"/>
          <exon e_start="98642" e_stop="98810"/>
          <exon e_start="98979" e_stop="99189"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATGCCCAGCGGGTGGTTGGATATGCTCTTTTCAAGGATGGAAAGAGCACAAATGTTTCCTATCCCTTGAAAAACTTCCATTCGGATGTGGCTGGGAGAAGCTTTCACAATGGGCGCTTCATA-CAGAAGATGAGAGAAAAAGCAGCTACTCTTCCCAAGTAAGCTTACCCATGCAGTATTATTTATTAGAACTGTTTTCGACACATCATATTAATCTTTCCTTATTAATAAAAAGAACTGTCTAGACACATTTCATGCTTTTAGTAATTGATACAATCATGTAATTGTAATTATCCTTTTGCTTATCATAGTTGCAAATAATCAATTGACTGGTTTTTATTAAATTATGTACAGTGTACGATTGGAACAAGGCACCGTAA-CATCCCTGATTGAAGAAAATGGATCCATTAAGGGTGTTCAGTACAAAACTAAGGCTGGCCAAGAACTTAAAGCACATG-CTCCTCTTA-CAGTAGTTTGTGATGGGTG-CTTCTCAAACTTGCGACGCTCGCTTTGTGACCCTAAGGTGAAGTTAATACCACTAAACATGTCAGTTGATTTGTTTCTGTAGTGTCATATGCACACATCAGGTCAAGTAAAACCTTCATATGCCTGGTGATATATGTTACCTGCACCGAGTTTGGAAAATTTAGATCTTGAAACTTATTGTAAGTGCGAGTATTGACATGTGCAGGTTGATGTTCCCTCTTGCTTTGTTGGTCTGGTATTGGAATTGGAGAATGATCGACTTCCATACCCAAACCATGGGCATGTTATTCTGGCAGATCCTTCTCCCATCTTATTTTATCCTATCAGTAGCACGGAAATTCGCTGCTTGGTCGATGTACCTGGTCAAAAGCTTCCTTCTCTTGCTAATGGTGATATGGCAAATTATTTGAAAACTA</genome_strand>
        <mrna_strand>TGATGCCCAGCGGGTGGTTGGATATGCTCTTTTCAAGGATGGAAAGAGCACAAATGTTTCCTATCCCTTGAAAAACTTCCATTCGGATGTGGCTGGGAGAAGCTTTCACAATGGGCGCTTCATACCAGAAGATGAGAGAAAAAGCAGCTACTCTTCCCAA....................................................................................................................................................................................................TGTACGATTGGAACAAGGCACCGTAACCATCCCTGATTGAAGAAAATGGATCCATTAAGGGTGTTCAGTACAAAACTAAGGCTGGCCAAGAACTTAAAGCACATGCCTCCTCTTACCAGTAGTTTGTGATGGGTGCCTTCTCAAACTTGCGACGCTCGCTTTGTGACCCTAAG........................................................................................................................................................................GTTGATGTTCCCTCTTGCTTTGTTGGTCTGGTATTGGAATTGGAGAATGATCGACTTCCATACCCAAACCATGGGCATGTTATTCTGGCAGATCCTTCTCCCATCTTATTTTATCCTATCAGTAGCACGGAAATTCGCTGCTTGGTCGATGTACCTGGTCAAAAGCTTCCTTCTCTTGCTAATGGTGATATGGCAAATTATTTGAAAACTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E698362" ref_strand="+" ref_description="SGN-E698362 [FA06AC07]">
      <seq>cccttttaatgtctcctatcccttgacgaacttccattccgatgtggctgggagaagctttcacaatgggcgcttcataccgaagatgagagaaaaagcagctactcttcccaatgtacgattggaacaaggcaccgtaacatccctgattgaagaaaatggatccattaagggtgttccgtacaaaactaaggctggccaagaacttcaagcacatgctcctcttacagtagtttgtgatgggtgcttctcaaacttgcgacgctcgctttgtgaccctaaggttgatgttccctcttgctttgttggtctggtattggaattggagaatgatcgacttccatacccaaaccatgggcatgttattctggcagatccttctcccatcttattttatcctatcagcagcacggaaattcgctgcttggtcgatgtacctggtcacaagcttccttctcttgatcatggcgatatggcaaattatttgaccactatggtacctccccaagtaccacctgagctacgtgatgcgtttctatctgctattgataaggggcatattaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="81745" stop="99745"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98332" g_stop="98445" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="114" r_length="114" r_score="0.895"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98446" i_stop="98641" i_length="196">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98642" g_stop="98810" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="115" r_stop="283" r_length="169" r_score="0.988"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98811" i_stop="98978" i_length="168">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.957" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98979" g_stop="99203" g_length="225"/>
          <reference_exon_boundary r_type="cDNA" r_start="284" r_stop="508" r_length="225" r_score="0.960"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="99204" i_stop="99389" i_length="186">
            <donor d_prob="0.999" d_score="0.86"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="99390" g_stop="99445" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="509" r_stop="564" r_length="56" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-E698362" ref_strand="+">
        <total_alignment_score>0.957</total_alignment_score>
        <cumulative_length_of_scored_exons>564</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E698362" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98332" e_stop="98445"/>
          <exon e_start="98642" e_stop="98810"/>
          <exon e_start="98979" e_stop="99203"/>
          <exon e_start="99390" e_stop="99445"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGCACAAATGTTTCCTATCCCTTGAAAAACTTCCATTCGGATGTGGCTGGGAGAAGCTTTCACAATGGGCGCTTCATACAGAAGATGAGAGAAAAAGCAGCTACTCTTCCCAAGTAAGCTTACCCATGCAGTATTATTTATTAGAACTGTTTTCGACACATCATATTAATCTTTCCTTATTAATAAAAAGAACTGTCTAGACACATTTCATGCTTTTAGTAATTGATACAATCATGTAATTGTAATTATCCTTTTGCTTATCATAGTTGCAAATAATCAATTGACTGGTTTTTATTAAATTATGTACAGTGTACGATTGGAACAAGGCACCGTAACATCCCTGATTGAAGAAAATGGATCCATTAAGGGTGTTCAGTACAAAACTAAGGCTGGCCAAGAACTTAAAGCACATGCTCCTCTTACAGTAGTTTGTGATGGGTGCTTCTCAAACTTGCGACGCTCGCTTTGTGACCCTAAGGTGAAGTTAATACCACTAAACATGTCAGTTGATTTGTTTCTGTAGTGTCATATGCACACATCAGGTCAAGTAAAACCTTCATATGCCTGGTGATATATGTTACCTGCACCGAGTTTGGAAAATTTAGATCTTGAAACTTATTGTAAGTGCGAGTATTGACATGTGCAGGTTGATGTTCCCTCTTGCTTTGTTGGTCTGGTATTGGAATTGGAGAATGATCGACTTCCATACCCAAACCATGGGCATGTTATTCTGGCAGATCCTTCTCCCATCTTATTTTATCCTATCAGTAGCACGGAAATTCGCTGCTTGGTCGATGTACCTGGTCAAAAGCTTCCTTCTCTTGCTAATGGTGATATGGCAAATTATTTGAAAACTATGGTAGCTCCCCAGGTACGTACAGTTTCCCTGCATGGTACTATTTTTATTTTTCTTAACTTTAGAATATAGTCATACACACAGCCAGTATAAAAAGTCTGTCCTTGTTTTTTCTACCTCACATACAATTGCCTGTTCCTAAAGATAGCTATTTGGTTCCTCCCAATGTGCCACCATGATGGTATCTTTACATTTTTTCAGGTACCACCTGAGCTACGTGATGCGTTTCTATCTGCAATTGATAAGGGGCATATTAA</genome_strand>
        <mrna_strand>CCCTTTTAATGTCTCCTATCCCTTGACGAACTTCCATTCCGATGTGGCTGGGAGAAGCTTTCACAATGGGCGCTTCATACCGAAGATGAGAGAAAAAGCAGCTACTCTTCCCAA....................................................................................................................................................................................................TGTACGATTGGAACAAGGCACCGTAACATCCCTGATTGAAGAAAATGGATCCATTAAGGGTGTTCCGTACAAAACTAAGGCTGGCCAAGAACTTCAAGCACATGCTCCTCTTACAGTAGTTTGTGATGGGTGCTTCTCAAACTTGCGACGCTCGCTTTGTGACCCTAAG........................................................................................................................................................................GTTGATGTTCCCTCTTGCTTTGTTGGTCTGGTATTGGAATTGGAGAATGATCGACTTCCATACCCAAACCATGGGCATGTTATTCTGGCAGATCCTTCTCCCATCTTATTTTATCCTATCAGCAGCACGGAAATTCGCTGCTTGGTCGATGTACCTGGTCACAAGCTTCCTTCTCTTGATCATGGCGATATGGCAAATTATTTGACCACTATGGTACCTCCCCAA..........................................................................................................................................................................................GTACCACCTGAGCTACGTGATGCGTTTCTATCTGCTATTGATAAGGGGCATATTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E263109" ref_strand="+" ref_description="SGN-E263109 [cLEG-59-N18]">
      <seq>acaaatgtttcctatcccttgaaaaacttccattcggatgtggctgggagaagctttcacaatgggcgcttcatacagaagatgagagaaaaagcagctactcttcccaatgtacgattggaacaaggcaccgtaacatccctgattgaagaaaatggatccattaagggtgttcagtacaaaactaaggctggccaagaacttaaagcacatgctcctcttacagtagtttgtgatgggtgcttctcaaacttgcgacgctcgctttgtgaccctaaggttgatgttccctcttgctttgttggtctggtattggaattggagaatgatcgacttccatacccaaaccatgggcatgttattctggcagatccttctcccatcttattttatcctatcagtagcacggaaattcgctgcttggtcgatgtacctggtcaaaagcttccttctcttgctaatggtgatatggcaaattatttgaaaactatggtagctccccaggtaccacctgagctacgtgatgcgtttctatctgcaattgataaggggcatattaaaactatgccaaacaggagcatgccagctgctccctatcctacacctggagctctgttgctaggcgattctttcaacatgcgccatcattaactggtgggggaatgactgttgcgctttcagacattgcagtattaaggaatcttcttatgccattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="81742" stop="99902"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98336" g_stop="98445" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="110" r_length="110" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98446" i_stop="98641" i_length="196">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98642" g_stop="98810" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="111" r_stop="279" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98811" i_stop="98978" i_length="168">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.957" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98979" g_stop="99203" g_length="225"/>
          <reference_exon_boundary r_type="cDNA" r_start="280" r_stop="504" r_length="225" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="99204" i_stop="99389" i_length="186">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="99390" g_stop="99602" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="505" r_stop="716" r_length="212" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-E263109" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>717</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E263109" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98336" e_stop="98445"/>
          <exon e_start="98642" e_stop="98810"/>
          <exon e_start="98979" e_stop="99203"/>
          <exon e_start="99390" e_stop="99602"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAAATGTTTCCTATCCCTTGAAAAACTTCCATTCGGATGTGGCTGGGAGAAGCTTTCACAATGGGCGCTTCATACAGAAGATGAGAGAAAAAGCAGCTACTCTTCCCAAGTAAGCTTACCCATGCAGTATTATTTATTAGAACTGTTTTCGACACATCATATTAATCTTTCCTTATTAATAAAAAGAACTGTCTAGACACATTTCATGCTTTTAGTAATTGATACAATCATGTAATTGTAATTATCCTTTTGCTTATCATAGTTGCAAATAATCAATTGACTGGTTTTTATTAAATTATGTACAGTGTACGATTGGAACAAGGCACCGTAACATCCCTGATTGAAGAAAATGGATCCATTAAGGGTGTTCAGTACAAAACTAAGGCTGGCCAAGAACTTAAAGCACATGCTCCTCTTACAGTAGTTTGTGATGGGTGCTTCTCAAACTTGCGACGCTCGCTTTGTGACCCTAAGGTGAAGTTAATACCACTAAACATGTCAGTTGATTTGTTTCTGTAGTGTCATATGCACACATCAGGTCAAGTAAAACCTTCATATGCCTGGTGATATATGTTACCTGCACCGAGTTTGGAAAATTTAGATCTTGAAACTTATTGTAAGTGCGAGTATTGACATGTGCAGGTTGATGTTCCCTCTTGCTTTGTTGGTCTGGTATTGGAATTGGAGAATGATCGACTTCCATACCCAAACCATGGGCATGTTATTCTGGCAGATCCTTCTCCCATCTTATTTTATCCTATCAGTAGCACGGAAATTCGCTGCTTGGTCGATGTACCTGGTCAAAAGCTTCCTTCTCTTGCTAATGGTGATATGGCAAATTATTTGAAAACTATGGTAGCTCCCCAGGTACGTACAGTTTCCCTGCATGGTACTATTTTTATTTTTCTTAACTTTAGAATATAGTCATACACACAGCCAGTATAAAAAGTCTGTCCTTGTTTTTTCTACCTCACATACAATTGCCTGTTCCTAAAGATAGCTATTTGGTTCCTCCCAATGTGCCACCATGATGGTATCTTTACATTTTTTCAGGTACCACCTGAGCTACGTGATGCGTTTCTATCTGCAATTGATAAGGGGCATATTAAAACTATGCCAAACAGGAGCATGCCAGCTGCTCCCTATCCTACACCTGGAGCTCTGTTGCTAGGCGATTCTTTCAACATGCGCCATCCATTAACTGGTGGGGGAATGACTGTTGCGCTTTCAGACATTGCAGTATTAAGGAATCTTCTTATGCCATTG</genome_strand>
        <mrna_strand>ACAAATGTTTCCTATCCCTTGAAAAACTTCCATTCGGATGTGGCTGGGAGAAGCTTTCACAATGGGCGCTTCATACAGAAGATGAGAGAAAAAGCAGCTACTCTTCCCAA....................................................................................................................................................................................................TGTACGATTGGAACAAGGCACCGTAACATCCCTGATTGAAGAAAATGGATCCATTAAGGGTGTTCAGTACAAAACTAAGGCTGGCCAAGAACTTAAAGCACATGCTCCTCTTACAGTAGTTTGTGATGGGTGCTTCTCAAACTTGCGACGCTCGCTTTGTGACCCTAAG........................................................................................................................................................................GTTGATGTTCCCTCTTGCTTTGTTGGTCTGGTATTGGAATTGGAGAATGATCGACTTCCATACCCAAACCATGGGCATGTTATTCTGGCAGATCCTTCTCCCATCTTATTTTATCCTATCAGTAGCACGGAAATTCGCTGCTTGGTCGATGTACCTGGTCAAAAGCTTCCTTCTCTTGCTAATGGTGATATGGCAAATTATTTGAAAACTATGGTAGCTCCCCAG..........................................................................................................................................................................................GTACCACCTGAGCTACGTGATGCGTTTCTATCTGCAATTGATAAGGGGCATATTAAAACTATGCCAAACAGGAGCATGCCAGCTGCTCCCTATCCTACACCTGGAGCTCTGTTGCTAGGCGATTCTTTCAACATGCGCCAT-CATTAACTGGTGGGGGAATGACTGTTGCGCTTTCAGACATTGCAGTATTAAGGAATCTTCTTATGCCATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E256181" ref_strand="+" ref_description="SGN-E256181 [cLEG-37-C8]">
      <seq>caaatgtttcctatcccttgaaaatcttccattcggatgtggctgggagaaggggtcacaatgggcgcttcatacagaacatgagagaaaaagcagctactcttcccaatgtacgattggaacaaggcaccgtaacatccctgattgaagaaaatggatccattaagggtgttcagtacaaaactaaggctggccaagaacttaaagcacatgctcctcttacagtagtttgtgatgggtgcttctcaaacttgcgacgctcgctttgtgaccctaaggttgatgttccctcttgctttgttggtctggtattggaattggagaatgatcgacttccatacccaaaccatgggcatgttattctggcagatccttctcccatcttattttatcctatcagtagcacggaaattcgctgcttggtcgatgtacctggtcaaaagcttccttctcttgctaatggtgatatggcaaattatttgaaaactatggtagctccccaggtaccacctgagctacgtgatgcgtttctatctgcaattgataa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="81743" stop="99733"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98337" g_stop="98445" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="109" r_length="109" r_score="0.954"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98446" i_stop="98641" i_length="196">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98642" g_stop="98810" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="110" r_stop="278" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98811" i_stop="98978" i_length="168">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.957" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98979" g_stop="99203" g_length="225"/>
          <reference_exon_boundary r_type="cDNA" r_start="279" r_stop="503" r_length="225" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="99204" i_stop="99389" i_length="186">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="99390" g_stop="99433" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="504" r_stop="547" r_length="44" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-E256181" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>547</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E256181" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98337" e_stop="98445"/>
          <exon e_start="98642" e_stop="98810"/>
          <exon e_start="98979" e_stop="99203"/>
          <exon e_start="99390" e_stop="99433"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAATGTTTCCTATCCCTTGAAAAACTTCCATTCGGATGTGGCTGGGAGAAGCTTTCACAATGGGCGCTTCATACAGAAGATGAGAGAAAAAGCAGCTACTCTTCCCAAGTAAGCTTACCCATGCAGTATTATTTATTAGAACTGTTTTCGACACATCATATTAATCTTTCCTTATTAATAAAAAGAACTGTCTAGACACATTTCATGCTTTTAGTAATTGATACAATCATGTAATTGTAATTATCCTTTTGCTTATCATAGTTGCAAATAATCAATTGACTGGTTTTTATTAAATTATGTACAGTGTACGATTGGAACAAGGCACCGTAACATCCCTGATTGAAGAAAATGGATCCATTAAGGGTGTTCAGTACAAAACTAAGGCTGGCCAAGAACTTAAAGCACATGCTCCTCTTACAGTAGTTTGTGATGGGTGCTTCTCAAACTTGCGACGCTCGCTTTGTGACCCTAAGGTGAAGTTAATACCACTAAACATGTCAGTTGATTTGTTTCTGTAGTGTCATATGCACACATCAGGTCAAGTAAAACCTTCATATGCCTGGTGATATATGTTACCTGCACCGAGTTTGGAAAATTTAGATCTTGAAACTTATTGTAAGTGCGAGTATTGACATGTGCAGGTTGATGTTCCCTCTTGCTTTGTTGGTCTGGTATTGGAATTGGAGAATGATCGACTTCCATACCCAAACCATGGGCATGTTATTCTGGCAGATCCTTCTCCCATCTTATTTTATCCTATCAGTAGCACGGAAATTCGCTGCTTGGTCGATGTACCTGGTCAAAAGCTTCCTTCTCTTGCTAATGGTGATATGGCAAATTATTTGAAAACTATGGTAGCTCCCCAGGTACGTACAGTTTCCCTGCATGGTACTATTTTTATTTTTCTTAACTTTAGAATATAGTCATACACACAGCCAGTATAAAAAGTCTGTCCTTGTTTTTTCTACCTCACATACAATTGCCTGTTCCTAAAGATAGCTATTTGGTTCCTCCCAATGTGCCACCATGATGGTATCTTTACATTTTTTCAGGTACCACCTGAGCTACGTGATGCGTTTCTATCTGCAATTGATAA</genome_strand>
        <mrna_strand>CAAATGTTTCCTATCCCTTGAAAATCTTCCATTCGGATGTGGCTGGGAGAAGGGGTCACAATGGGCGCTTCATACAGAACATGAGAGAAAAAGCAGCTACTCTTCCCAA....................................................................................................................................................................................................TGTACGATTGGAACAAGGCACCGTAACATCCCTGATTGAAGAAAATGGATCCATTAAGGGTGTTCAGTACAAAACTAAGGCTGGCCAAGAACTTAAAGCACATGCTCCTCTTACAGTAGTTTGTGATGGGTGCTTCTCAAACTTGCGACGCTCGCTTTGTGACCCTAAG........................................................................................................................................................................GTTGATGTTCCCTCTTGCTTTGTTGGTCTGGTATTGGAATTGGAGAATGATCGACTTCCATACCCAAACCATGGGCATGTTATTCTGGCAGATCCTTCTCCCATCTTATTTTATCCTATCAGTAGCACGGAAATTCGCTGCTTGGTCGATGTACCTGGTCAAAAGCTTCCTTCTCTTGCTAATGGTGATATGGCAAATTATTTGAAAACTATGGTAGCTCCCCAG..........................................................................................................................................................................................GTACCACCTGAGCTACGTGATGCGTTTCTATCTGCAATTGATAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E207981" ref_strand="+" ref_description="SGN-E207981 [cLEC-34-F14]">
      <seq>aaaacttccattcggatgtggctgggagaagctttcacaatgggcgcttcatacagaagatgagagaaaaagcagctactcttcccaatgtacgattggaacaaggcaccgtaacatccctgattgaagaaaatggatccattaagggtgttcagtacaaaactaaggctggccaagaacttaaagcacatgctcctcttacagtagtttgtgatgggtgcttctcaaacttgcgacgctcgctttgtgaccctaaggttgatgttccctcttgctttgttggtctggtattggaattggagaatgatcgacttccatacccaaaccatgggcatgttattctggcagatccttctcccatcttattttatcctatcagtagcacggaaattcgctgcttggtcgatgtacctggtcaaaagcttccttctcttgctaatggtgatatggcaaattatttgaaaactatggtagctccccaggtaccacctgagctacgtgatgcgtttctatctgcaattgataaggggcatattaaaactatgccaaacaggagcatgccagctgctccctatcctacacctggagctctgttgctaggcgattctttcaacatgcgccatccattaactggtgggggaatgactgttgcgctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="81764" stop="99863"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98358" g_stop="98445" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="88" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98446" i_stop="98641" i_length="196">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98642" g_stop="98810" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="89" r_stop="257" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98811" i_stop="98978" i_length="168">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.957" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98979" g_stop="99203" g_length="225"/>
          <reference_exon_boundary r_type="cDNA" r_start="258" r_stop="482" r_length="225" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="99204" i_stop="99389" i_length="186">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="99390" g_stop="99563" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="483" r_stop="656" r_length="174" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-E207981" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>656</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E207981" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98358" e_stop="98445"/>
          <exon e_start="98642" e_stop="98810"/>
          <exon e_start="98979" e_stop="99203"/>
          <exon e_start="99390" e_stop="99563"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAACTTCCATTCGGATGTGGCTGGGAGAAGCTTTCACAATGGGCGCTTCATACAGAAGATGAGAGAAAAAGCAGCTACTCTTCCCAAGTAAGCTTACCCATGCAGTATTATTTATTAGAACTGTTTTCGACACATCATATTAATCTTTCCTTATTAATAAAAAGAACTGTCTAGACACATTTCATGCTTTTAGTAATTGATACAATCATGTAATTGTAATTATCCTTTTGCTTATCATAGTTGCAAATAATCAATTGACTGGTTTTTATTAAATTATGTACAGTGTACGATTGGAACAAGGCACCGTAACATCCCTGATTGAAGAAAATGGATCCATTAAGGGTGTTCAGTACAAAACTAAGGCTGGCCAAGAACTTAAAGCACATGCTCCTCTTACAGTAGTTTGTGATGGGTGCTTCTCAAACTTGCGACGCTCGCTTTGTGACCCTAAGGTGAAGTTAATACCACTAAACATGTCAGTTGATTTGTTTCTGTAGTGTCATATGCACACATCAGGTCAAGTAAAACCTTCATATGCCTGGTGATATATGTTACCTGCACCGAGTTTGGAAAATTTAGATCTTGAAACTTATTGTAAGTGCGAGTATTGACATGTGCAGGTTGATGTTCCCTCTTGCTTTGTTGGTCTGGTATTGGAATTGGAGAATGATCGACTTCCATACCCAAACCATGGGCATGTTATTCTGGCAGATCCTTCTCCCATCTTATTTTATCCTATCAGTAGCACGGAAATTCGCTGCTTGGTCGATGTACCTGGTCAAAAGCTTCCTTCTCTTGCTAATGGTGATATGGCAAATTATTTGAAAACTATGGTAGCTCCCCAGGTACGTACAGTTTCCCTGCATGGTACTATTTTTATTTTTCTTAACTTTAGAATATAGTCATACACACAGCCAGTATAAAAAGTCTGTCCTTGTTTTTTCTACCTCACATACAATTGCCTGTTCCTAAAGATAGCTATTTGGTTCCTCCCAATGTGCCACCATGATGGTATCTTTACATTTTTTCAGGTACCACCTGAGCTACGTGATGCGTTTCTATCTGCAATTGATAAGGGGCATATTAAAACTATGCCAAACAGGAGCATGCCAGCTGCTCCCTATCCTACACCTGGAGCTCTGTTGCTAGGCGATTCTTTCAACATGCGCCATCCATTAACTGGTGGGGGAATGACTGTTGCGCTT</genome_strand>
        <mrna_strand>AAAACTTCCATTCGGATGTGGCTGGGAGAAGCTTTCACAATGGGCGCTTCATACAGAAGATGAGAGAAAAAGCAGCTACTCTTCCCAA....................................................................................................................................................................................................TGTACGATTGGAACAAGGCACCGTAACATCCCTGATTGAAGAAAATGGATCCATTAAGGGTGTTCAGTACAAAACTAAGGCTGGCCAAGAACTTAAAGCACATGCTCCTCTTACAGTAGTTTGTGATGGGTGCTTCTCAAACTTGCGACGCTCGCTTTGTGACCCTAAG........................................................................................................................................................................GTTGATGTTCCCTCTTGCTTTGTTGGTCTGGTATTGGAATTGGAGAATGATCGACTTCCATACCCAAACCATGGGCATGTTATTCTGGCAGATCCTTCTCCCATCTTATTTTATCCTATCAGTAGCACGGAAATTCGCTGCTTGGTCGATGTACCTGGTCAAAAGCTTCCTTCTCTTGCTAATGGTGATATGGCAAATTATTTGAAAACTATGGTAGCTCCCCAG..........................................................................................................................................................................................GTACCACCTGAGCTACGTGATGCGTTTCTATCTGCAATTGATAAGGGGCATATTAAAACTATGCCAAACAGGAGCATGCCAGCTGCTCCCTATCCTACACCTGGAGCTCTGTTGCTAGGCGATTCTTTCAACATGCGCCATCCATTAACTGGTGGGGGAATGACTGTTGCGCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E214511" ref_strand="+" ref_description="SGN-E214511 [cLEC-79-A21]">
      <seq>aaaacttccattcggatgtggctgggagaagctttcacaatgggcgcttcatacagaagatgagagaaaaagcagctactcttcccaatgtacgattggaacaaggcaccgtaacatccctgattgaagaaaatggatccattaagggtgttcagtacaaaactaaggctggccaagaacttaaagcacatgctcctcttacagtagtttgtgatgggtgcttctcaaacttgcgacgctcgctttgtgaccctaaggttgatgttccctcttgctttgttggtctggtattggaattggagaatgatcgacttccatacccaaaccatgggcatgttattctggcagatccttctcccatcttattttatcctatcagtagcacggaaattcgctgcttggtcgatgtacctggtcaaaagcttccttctcttgctaatggtgatatggcaaattatttgaaaactatggtagctccccaggtaccacctgagctacgtgatgcgtttctatctgcaattgataaggggcatattaaaactatgccaaacaggagcatgccagctgctccctatcctacacctggagctctgttgctaggcgattctttcacatgcgccatccattaactggtgggggaatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="81764" stop="99852"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98358" g_stop="98445" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="88" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98446" i_stop="98641" i_length="196">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98642" g_stop="98810" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="89" r_stop="257" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98811" i_stop="98978" i_length="168">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.957" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98979" g_stop="99203" g_length="225"/>
          <reference_exon_boundary r_type="cDNA" r_start="258" r_stop="482" r_length="225" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="99204" i_stop="99389" i_length="186">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="99390" g_stop="99552" g_length="163"/>
          <reference_exon_boundary r_type="cDNA" r_start="483" r_stop="644" r_length="162" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-E214511" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>645</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E214511" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98358" e_stop="98445"/>
          <exon e_start="98642" e_stop="98810"/>
          <exon e_start="98979" e_stop="99203"/>
          <exon e_start="99390" e_stop="99552"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAACTTCCATTCGGATGTGGCTGGGAGAAGCTTTCACAATGGGCGCTTCATACAGAAGATGAGAGAAAAAGCAGCTACTCTTCCCAAGTAAGCTTACCCATGCAGTATTATTTATTAGAACTGTTTTCGACACATCATATTAATCTTTCCTTATTAATAAAAAGAACTGTCTAGACACATTTCATGCTTTTAGTAATTGATACAATCATGTAATTGTAATTATCCTTTTGCTTATCATAGTTGCAAATAATCAATTGACTGGTTTTTATTAAATTATGTACAGTGTACGATTGGAACAAGGCACCGTAACATCCCTGATTGAAGAAAATGGATCCATTAAGGGTGTTCAGTACAAAACTAAGGCTGGCCAAGAACTTAAAGCACATGCTCCTCTTACAGTAGTTTGTGATGGGTGCTTCTCAAACTTGCGACGCTCGCTTTGTGACCCTAAGGTGAAGTTAATACCACTAAACATGTCAGTTGATTTGTTTCTGTAGTGTCATATGCACACATCAGGTCAAGTAAAACCTTCATATGCCTGGTGATATATGTTACCTGCACCGAGTTTGGAAAATTTAGATCTTGAAACTTATTGTAAGTGCGAGTATTGACATGTGCAGGTTGATGTTCCCTCTTGCTTTGTTGGTCTGGTATTGGAATTGGAGAATGATCGACTTCCATACCCAAACCATGGGCATGTTATTCTGGCAGATCCTTCTCCCATCTTATTTTATCCTATCAGTAGCACGGAAATTCGCTGCTTGGTCGATGTACCTGGTCAAAAGCTTCCTTCTCTTGCTAATGGTGATATGGCAAATTATTTGAAAACTATGGTAGCTCCCCAGGTACGTACAGTTTCCCTGCATGGTACTATTTTTATTTTTCTTAACTTTAGAATATAGTCATACACACAGCCAGTATAAAAAGTCTGTCCTTGTTTTTTCTACCTCACATACAATTGCCTGTTCCTAAAGATAGCTATTTGGTTCCTCCCAATGTGCCACCATGATGGTATCTTTACATTTTTTCAGGTACCACCTGAGCTACGTGATGCGTTTCTATCTGCAATTGATAAGGGGCATATTAAAACTATGCCAAACAGGAGCATGCCAGCTGCTCCCTATCCTACACCTGGAGCTCTGTTGCTAGGCGATTCTTTCAACATGCGCCATCCATTAACTGGTGGGGGAATGA</genome_strand>
        <mrna_strand>AAAACTTCCATTCGGATGTGGCTGGGAGAAGCTTTCACAATGGGCGCTTCATACAGAAGATGAGAGAAAAAGCAGCTACTCTTCCCAA....................................................................................................................................................................................................TGTACGATTGGAACAAGGCACCGTAACATCCCTGATTGAAGAAAATGGATCCATTAAGGGTGTTCAGTACAAAACTAAGGCTGGCCAAGAACTTAAAGCACATGCTCCTCTTACAGTAGTTTGTGATGGGTGCTTCTCAAACTTGCGACGCTCGCTTTGTGACCCTAAG........................................................................................................................................................................GTTGATGTTCCCTCTTGCTTTGTTGGTCTGGTATTGGAATTGGAGAATGATCGACTTCCATACCCAAACCATGGGCATGTTATTCTGGCAGATCCTTCTCCCATCTTATTTTATCCTATCAGTAGCACGGAAATTCGCTGCTTGGTCGATGTACCTGGTCAAAAGCTTCCTTCTCTTGCTAATGGTGATATGGCAAATTATTTGAAAACTATGGTAGCTCCCCAG..........................................................................................................................................................................................GTACCACCTGAGCTACGTGATGCGTTTCTATCTGCAATTGATAAGGGGCATATTAAAACTATGCCAAACAGGAGCATGCCAGCTGCTCCCTATCCTACACCTGGAGCTCTGTTGCTAGGCGATTCTTTC-ACATGCGCCATCCATTAACTGGTGGGGGAATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E308363" ref_strand="+" ref_description="SGN-E308363 [cLEY-25-D5]">
      <seq>tcttcttatgccattgctagacctgaatgacgcagatgagttgtgtaaatatctggagtcattttatactttgcgcaagccagtggcttccaccattaatactttggctggtgctctgtataaagagttctgagcttctcctgatcatgcgaggagggagatgcgagatgcgtgttttgactatttgagccttggagagcacttgttcaactggacctgtagctctactctctggtcttgatcctaatccaatgagcttggtgctccatttctttgcagaggccagtttatggagttggtcgtttacttgtaccttttccttctccaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="82993" stop="100529"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="99587" g_stop="99665" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="79" r_length="79" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="99666" i_stop="99982" i_length="317">
            <donor d_prob="0.911" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="99983" g_stop="100229" g_length="247"/>
          <reference_exon_boundary r_type="cDNA" r_start="80" r_stop="328" r_length="249" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-E308363" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>326</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E308363" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="99587" e_stop="99665"/>
          <exon e_start="99983" e_stop="100229"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTCTTATGCCATTGCAAGACCTGAATGACGCAGATGAGTTGTGTAAATATCTGGAGTCATTTTATACTTTGCGCAAGGTAAAGCTAAAACTGTTGTCTGGATAACACTATCATCGGTTGAATGATTTGCAATATGTGTTGTGGCTTATTTAAAAAAATATTTTATTTCAGCTTTTTGATCAAGTGTAGGGAGAACCTTCTTTCTAGCAATTTGACGTGGCATATGATGTCTTTTATCTCTACATAAAAATCATACGTTATTCGAAGCAGTTTTAATGTCTAAAACTGCATCACTTTTTTTAGTGCTATTCCCTCTAAAAGAATACAAACTAACAGAACTGGATTTCTGACTTTATTAGCCTGTTACTTATTCTTGTATTGGTCTCTGTTTTCAGCCAGTGGCTTCCACCATAAATACTTTGGCTGGAGCTCTGTATAAGGTGTTCTGTGCTTCTCCTGATCAAGCGAGGAGGGAGATGCGAGATGCGTGTTTTGACTATTTGAGCCTTGGAG-GCACTTGTTCAACTGGACCTGTAGCTCTACTCTCTGGTCTTGATCCTAATCCAATGAGCTTGGTGCTCCATTTCTTTGCAGTGGCC-GTTTATGGAGTTGGTCGTTTACTTGTACCTTTTCCTTCTCCAA</genome_strand>
        <mrna_strand>TCTTCTTATGCCATTGCTAGACCTGAATGACGCAGATGAGTTGTGTAAATATCTGGAGTCATTTTATACTTTGCGCAAG.............................................................................................................................................................................................................................................................................................................................CCAGTGGCTTCCACCATTAATACTTTGGCTGGTGCTCTGTATAAAGAGTTCTGAGCTTCTCCTGATCATGCGAGGAGGGAGATGCGAGATGCGTGTTTTGACTATTTGAGCCTTGGAGAGCACTTGTTCAACTGGACCTGTAGCTCTACTCTCTGGTCTTGATCCTAATCCAATGAGCTTGGTGCTCCATTTCTTTGCAGAGGCCAGTTTATGGAGTTGGTCGTTTACTTGTACCTTTTCCTTCTCCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E548792" ref_strand="+" ref_description="SGN-E548792 [TUS-64-H10](-)">
      <seq>tgcgagatgcgtgttttgactatttgagccttggaggcacttgttcaactggacctgtagctctactctctggtcttgatcctaatccaatgagcttggtgctccatttctttgcagtggccgtttatggagttggtcgtttacttgtaccttttccttctccaaagaagttgtggatcggagctaaattaatattgtctgcatcaggcatcatatttcccatcataaaggcagaagggatccggcaaatgttctttccaacaacaataccagcatatcacagagctcctcccgtgaagacggagtcagattaagcagaaaatttgttgaagttttgttccatgaatagcattaacatttttgcagttcctttctcgaagcacgaaatgtaagttccactctcccctcaccccaaaccctacaaatagaataagaatgacgacgaaaccttattgtaggcatattataccaaaaggaacttcaagtgtacgtattcattgaaatctaccttattgtaggcatattataccaaaaggaacttcaagtgtacgtattcatttaaaaaaaaaaaaaaaaaactcgaggggggccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="83471" stop="101085"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100065" g_stop="100261" g_length="197"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="197" r_length="197" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="100262" i_stop="100419" i_length="158">
            <donor d_prob="0.935" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="100420" g_stop="100784" g_length="365"/>
          <reference_exon_boundary r_type="cDNA" r_start="198" r_stop="562" r_length="365" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="563" polyA_stop="579"/>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-E548792" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>562</cumulative_length_of_scored_exons>
        <coverage percentage="0.949" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E548792" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100065" e_stop="100261"/>
          <exon e_start="100420" e_stop="100784"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCGAGATGCGTGTTTTGACTATTTGAGCCTTGGAGGCACTTGTTCAACTGGACCTGTAGCTCTACTCTCTGGTCTTGATCCTAATCCAATGAGCTTGGTGCTCCATTTCTTTGCAGTGGCCGTTTATGGAGTTGGTCGTTTACTTGTACCTTTTCCTTCTCCAAAGAAGTTGTGGATCGGAGCTAAATTAATATTGGTATGTACCTTAAATGTAGTATTCAAACTGTCTTCGTTGACTCTGAGCATGTGTGTGTTATATATTGAGCTACTTTCCAGTTGAAATTCCTACATACTCGTTCACCTTGTTTGAAAGTCTTGACCATTTTGGCATGCATGCTCTTTTTTTTTGTTCAGTCTGCATCAGGCATCATATTTCCCATCATAAAGGCAGAAGGGATCCGGCAAATGTTCTTTCCAACAACAATACCAGCATATCACAGAGCTCCTCCCGTGAAGACGGAGTCAGATTAAGCAGAAAATTTGTTGAAGTTTTGTTCCATGAATAGCATTAACATTTTTGCAGTTCCTTTCTCGAAGCACGAAATGTAAGTTCCACTCTCCCCTCACCCCAAACCCTACAAATAGAATAAGAATGACGACGAAACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTGAAATCTACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTTAA</genome_strand>
        <mrna_strand>TGCGAGATGCGTGTTTTGACTATTTGAGCCTTGGAGGCACTTGTTCAACTGGACCTGTAGCTCTACTCTCTGGTCTTGATCCTAATCCAATGAGCTTGGTGCTCCATTTCTTTGCAGTGGCCGTTTATGGAGTTGGTCGTTTACTTGTACCTTTTCCTTCTCCAAAGAAGTTGTGGATCGGAGCTAAATTAATATTG..............................................................................................................................................................TCTGCATCAGGCATCATATTTCCCATCATAAAGGCAGAAGGGATCCGGCAAATGTTCTTTCCAACAACAATACCAGCATATCACAGAGCTCCTCCCGTGAAGACGGAGTCAGATTAAGCAGAAAATTTGTTGAAGTTTTGTTCCATGAATAGCATTAACATTTTTGCAGTTCCTTTCTCGAAGCACGAAATGTAAGTTCCACTCTCCCCTCACCCCAAACCCTACAAATAGAATAAGAATGACGACGAAACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTGAAATCTACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E351126" ref_strand="+" ref_description="SGN-E351126 [cTOS-6-J4]">
      <seq>cacttgttcaactggacctgtagctctactctctggtcttgatcctaatccaatgagcttggtgctccatttctttgcagtggccgtttatggagttggtcgtttacttgtaccttttccttctccaaagaagttgtggatcggagctaaattaatattgtctgcatcaggcatcatatttcccatcataaaggcagaagggatccggcaaatgttctttccaacaacaataccagcatatcacagagctcctcccgtgaagacggagtcagattaagcagaaaatttgttgaagttttgttccatgaatagcattaacatttttgcagttcctttctcgaagcacgaaatgtaagttccactctcccctcaccccaaaccctacaaatagaataagaatgacgacgaaaccttattgtaggcatattataccaaaaggaacttcaagtgtacgtattcattgaaatctaccttattgtaggcatattataccaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="83508" stop="101060"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100102" g_stop="100261" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="160" r_length="160" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="100262" i_stop="100419" i_length="158">
            <donor d_prob="0.935" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="100420" g_stop="100762" g_length="343"/>
          <reference_exon_boundary r_type="cDNA" r_start="161" r_stop="503" r_length="343" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-E351126" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>503</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E351126" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100102" e_stop="100261"/>
          <exon e_start="100420" e_stop="100762"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACTTGTTCAACTGGACCTGTAGCTCTACTCTCTGGTCTTGATCCTAATCCAATGAGCTTGGTGCTCCATTTCTTTGCAGTGGCCGTTTATGGAGTTGGTCGTTTACTTGTACCTTTTCCTTCTCCAAAGAAGTTGTGGATCGGAGCTAAATTAATATTGGTATGTACCTTAAATGTAGTATTCAAACTGTCTTCGTTGACTCTGAGCATGTGTGTGTTATATATTGAGCTACTTTCCAGTTGAAATTCCTACATACTCGTTCACCTTGTTTGAAAGTCTTGACCATTTTGGCATGCATGCTCTTTTTTTTTGTTCAGTCTGCATCAGGCATCATATTTCCCATCATAAAGGCAGAAGGGATCCGGCAAATGTTCTTTCCAACAACAATACCAGCATATCACAGAGCTCCTCCCGTGAAGACGGAGTCAGATTAAGCAGAAAATTTGTTGAAGTTTTGTTCCATGAATAGCATTAACATTTTTGCAGTTCCTTTCTCGAAGCACGAAATGTAAGTTCCACTCTCCCCTCACCCCAAACCCTACAAATAGAATAAGAATGACGACGAAACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTGAAATCTACCTTATTGTAGGCATATTATACCAAAAGGAACT</genome_strand>
        <mrna_strand>CACTTGTTCAACTGGACCTGTAGCTCTACTCTCTGGTCTTGATCCTAATCCAATGAGCTTGGTGCTCCATTTCTTTGCAGTGGCCGTTTATGGAGTTGGTCGTTTACTTGTACCTTTTCCTTCTCCAAAGAAGTTGTGGATCGGAGCTAAATTAATATTG..............................................................................................................................................................TCTGCATCAGGCATCATATTTCCCATCATAAAGGCAGAAGGGATCCGGCAAATGTTCTTTCCAACAACAATACCAGCATATCACAGAGCTCCTCCCGTGAAGACGGAGTCAGATTAAGCAGAAAATTTGTTGAAGTTTTGTTCCATGAATAGCATTAACATTTTTGCAGTTCCTTTCTCGAAGCACGAAATGTAAGTTCCACTCTCCCCTCACCCCAAACCCTACAAATAGAATAAGAATGACGACGAAACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTGAAATCTACCTTATTGTAGGCATATTATACCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E357285" ref_strand="+" ref_description="SGN-E357285 [cTOS-23-I15]">
      <seq>cacttgttcaactggacctgtagctctactctctggtcttgatcctaatccaatgagcttggtgctccatttctttgcagtggccgtttatggagttggtcgtttacttgtaccttttccttctccaaagaagttgtggatcggagctaaattaatattgtctgcatcaggcatcatatttcccatcataaaggcagaagggatccggcaaatgttctttccaacaacaataccagcatatcacagagctcctcccgtgaagacggagtcagattaagcagaaaatttgttgaagttttgttccatgaatagcattaacatttttgcagttcctttctcgaagcacgaaatgtaagttccactctcccctcaccccaaaccctacaaatagaataagaatgacgacgaaaccttattgtaggcatattataccaaaaggaacttcaagtgtacgtattcattgaaatctaccttattgtaggcatattataccaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="83508" stop="101060"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100102" g_stop="100261" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="160" r_length="160" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="100262" i_stop="100419" i_length="158">
            <donor d_prob="0.935" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="100420" g_stop="100762" g_length="343"/>
          <reference_exon_boundary r_type="cDNA" r_start="161" r_stop="503" r_length="343" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-E357285" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>503</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E357285" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100102" e_stop="100261"/>
          <exon e_start="100420" e_stop="100762"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACTTGTTCAACTGGACCTGTAGCTCTACTCTCTGGTCTTGATCCTAATCCAATGAGCTTGGTGCTCCATTTCTTTGCAGTGGCCGTTTATGGAGTTGGTCGTTTACTTGTACCTTTTCCTTCTCCAAAGAAGTTGTGGATCGGAGCTAAATTAATATTGGTATGTACCTTAAATGTAGTATTCAAACTGTCTTCGTTGACTCTGAGCATGTGTGTGTTATATATTGAGCTACTTTCCAGTTGAAATTCCTACATACTCGTTCACCTTGTTTGAAAGTCTTGACCATTTTGGCATGCATGCTCTTTTTTTTTGTTCAGTCTGCATCAGGCATCATATTTCCCATCATAAAGGCAGAAGGGATCCGGCAAATGTTCTTTCCAACAACAATACCAGCATATCACAGAGCTCCTCCCGTGAAGACGGAGTCAGATTAAGCAGAAAATTTGTTGAAGTTTTGTTCCATGAATAGCATTAACATTTTTGCAGTTCCTTTCTCGAAGCACGAAATGTAAGTTCCACTCTCCCCTCACCCCAAACCCTACAAATAGAATAAGAATGACGACGAAACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTGAAATCTACCTTATTGTAGGCATATTATACCAAAAGGAACT</genome_strand>
        <mrna_strand>CACTTGTTCAACTGGACCTGTAGCTCTACTCTCTGGTCTTGATCCTAATCCAATGAGCTTGGTGCTCCATTTCTTTGCAGTGGCCGTTTATGGAGTTGGTCGTTTACTTGTACCTTTTCCTTCTCCAAAGAAGTTGTGGATCGGAGCTAAATTAATATTG..............................................................................................................................................................TCTGCATCAGGCATCATATTTCCCATCATAAAGGCAGAAGGGATCCGGCAAATGTTCTTTCCAACAACAATACCAGCATATCACAGAGCTCCTCCCGTGAAGACGGAGTCAGATTAAGCAGAAAATTTGTTGAAGTTTTGTTCCATGAATAGCATTAACATTTTTGCAGTTCCTTTCTCGAAGCACGAAATGTAAGTTCCACTCTCCCCTCACCCCAAACCCTACAAATAGAATAAGAATGACGACGAAACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTGAAATCTACCTTATTGTAGGCATATTATACCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E357496" ref_strand="+" ref_description="SGN-E357496 [cTOS-23-G16]">
      <seq>cacttgttcaactggacctgtagctctactctctggtcttgatcctaatccaatgagcttggtgctccatttctttgcagtggccgtttatggagttggtcgtttacttgtaccttttccttctccaaagaagttgtggatcggagctaaattaatattgtctgcatcaggcatcatatttcccatcataaaggcagaagggatccggcaaatgttctttccaacaacaataccagcatatcacagagctcctcccgtgaagacggagtcagattaagcagaaaatttgttgaagttttgttccatgaatagcattaacatttttgcagttcctttctcgaagcacgaaatgtaagttccactctcccctcaccccaaaccctacaaatagaataagaatgacgacgaaaccttattgtaggcatattataccaaaaggaacttcaagtgtacgtattcattgaaatctaccttattgtaggcatattataccaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="83508" stop="101060"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100102" g_stop="100261" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="160" r_length="160" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="100262" i_stop="100419" i_length="158">
            <donor d_prob="0.935" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="100420" g_stop="100762" g_length="343"/>
          <reference_exon_boundary r_type="cDNA" r_start="161" r_stop="503" r_length="343" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-E357496" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>503</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E357496" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100102" e_stop="100261"/>
          <exon e_start="100420" e_stop="100762"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACTTGTTCAACTGGACCTGTAGCTCTACTCTCTGGTCTTGATCCTAATCCAATGAGCTTGGTGCTCCATTTCTTTGCAGTGGCCGTTTATGGAGTTGGTCGTTTACTTGTACCTTTTCCTTCTCCAAAGAAGTTGTGGATCGGAGCTAAATTAATATTGGTATGTACCTTAAATGTAGTATTCAAACTGTCTTCGTTGACTCTGAGCATGTGTGTGTTATATATTGAGCTACTTTCCAGTTGAAATTCCTACATACTCGTTCACCTTGTTTGAAAGTCTTGACCATTTTGGCATGCATGCTCTTTTTTTTTGTTCAGTCTGCATCAGGCATCATATTTCCCATCATAAAGGCAGAAGGGATCCGGCAAATGTTCTTTCCAACAACAATACCAGCATATCACAGAGCTCCTCCCGTGAAGACGGAGTCAGATTAAGCAGAAAATTTGTTGAAGTTTTGTTCCATGAATAGCATTAACATTTTTGCAGTTCCTTTCTCGAAGCACGAAATGTAAGTTCCACTCTCCCCTCACCCCAAACCCTACAAATAGAATAAGAATGACGACGAAACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTGAAATCTACCTTATTGTAGGCATATTATACCAAAAGGAACT</genome_strand>
        <mrna_strand>CACTTGTTCAACTGGACCTGTAGCTCTACTCTCTGGTCTTGATCCTAATCCAATGAGCTTGGTGCTCCATTTCTTTGCAGTGGCCGTTTATGGAGTTGGTCGTTTACTTGTACCTTTTCCTTCTCCAAAGAAGTTGTGGATCGGAGCTAAATTAATATTG..............................................................................................................................................................TCTGCATCAGGCATCATATTTCCCATCATAAAGGCAGAAGGGATCCGGCAAATGTTCTTTCCAACAACAATACCAGCATATCACAGAGCTCCTCCCGTGAAGACGGAGTCAGATTAAGCAGAAAATTTGTTGAAGTTTTGTTCCATGAATAGCATTAACATTTTTGCAGTTCCTTTCTCGAAGCACGAAATGTAAGTTCCACTCTCCCCTCACCCCAAACCCTACAAATAGAATAAGAATGACGACGAAACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTGAAATCTACCTTATTGTAGGCATATTATACCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E357501" ref_strand="+" ref_description="SGN-E357501 [cTOS-23-I16]">
      <seq>cacttgttcaactggacctgtagctctactctctggtcttgatcctaatccaatgagcttggtgctccatttctttgcagtggccgtttatggagttggtcgtttacttgtaccttttccttctccaaagaagttgtggatcggagctaaattaatattgtctgcatcaggcatcatatttcccatcataaaggcagaagggatccggcaaatgttctttccaacaacaataccagcatatcacagagctcctcccgtgaagacggagtcagattaagcagaaaatttgttgaagttttgttccatgaatagcattaacatttttgcagttcctttctcgaagcacgaaatgtaagttccactctcccctcaccccaaaccctacaaatagaataagaatgacgacgaaaccttattgtaggcatattataccaaaaggaacttcaagtgtacgtattcattgaaatctaccttattgtaggcatattataccaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="83508" stop="101060"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100102" g_stop="100261" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="160" r_length="160" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="100262" i_stop="100419" i_length="158">
            <donor d_prob="0.935" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="100420" g_stop="100762" g_length="343"/>
          <reference_exon_boundary r_type="cDNA" r_start="161" r_stop="503" r_length="343" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-E357501" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>503</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E357501" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100102" e_stop="100261"/>
          <exon e_start="100420" e_stop="100762"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACTTGTTCAACTGGACCTGTAGCTCTACTCTCTGGTCTTGATCCTAATCCAATGAGCTTGGTGCTCCATTTCTTTGCAGTGGCCGTTTATGGAGTTGGTCGTTTACTTGTACCTTTTCCTTCTCCAAAGAAGTTGTGGATCGGAGCTAAATTAATATTGGTATGTACCTTAAATGTAGTATTCAAACTGTCTTCGTTGACTCTGAGCATGTGTGTGTTATATATTGAGCTACTTTCCAGTTGAAATTCCTACATACTCGTTCACCTTGTTTGAAAGTCTTGACCATTTTGGCATGCATGCTCTTTTTTTTTGTTCAGTCTGCATCAGGCATCATATTTCCCATCATAAAGGCAGAAGGGATCCGGCAAATGTTCTTTCCAACAACAATACCAGCATATCACAGAGCTCCTCCCGTGAAGACGGAGTCAGATTAAGCAGAAAATTTGTTGAAGTTTTGTTCCATGAATAGCATTAACATTTTTGCAGTTCCTTTCTCGAAGCACGAAATGTAAGTTCCACTCTCCCCTCACCCCAAACCCTACAAATAGAATAAGAATGACGACGAAACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTGAAATCTACCTTATTGTAGGCATATTATACCAAAAGGAACT</genome_strand>
        <mrna_strand>CACTTGTTCAACTGGACCTGTAGCTCTACTCTCTGGTCTTGATCCTAATCCAATGAGCTTGGTGCTCCATTTCTTTGCAGTGGCCGTTTATGGAGTTGGTCGTTTACTTGTACCTTTTCCTTCTCCAAAGAAGTTGTGGATCGGAGCTAAATTAATATTG..............................................................................................................................................................TCTGCATCAGGCATCATATTTCCCATCATAAAGGCAGAAGGGATCCGGCAAATGTTCTTTCCAACAACAATACCAGCATATCACAGAGCTCCTCCCGTGAAGACGGAGTCAGATTAAGCAGAAAATTTGTTGAAGTTTTGTTCCATGAATAGCATTAACATTTTTGCAGTTCCTTTCTCGAAGCACGAAATGTAAGTTCCACTCTCCCCTCACCCCAAACCCTACAAATAGAATAAGAATGACGACGAAACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTGAAATCTACCTTATTGTAGGCATATTATACCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E555136" ref_strand="+" ref_description="SGN-E555136 [cTSC-6-I2]">
      <seq>gttcaactggacctgtagctctactctctggtcttgatcctaatccaatgagcttggtgctccatttctttgcagtggccgtttatggagttggtcgtttacttgtaccttttccttctccaaagaagttgtggatcggagctaaattaatattgtctgcatcaggcatcatatttcccatcataaaggcagaagggatccggcaaatgttctttccaacaacaataccagcatatcacagagctcctcccgtgaagacggagtcagattaagcagaaaatttgttgaagttttgttccatgaatagcattaacatttttgcagttcctttctcgaagcacgaaatgtaagttccactctcccctcaccccaaaccctacaaatagaataagaatgacgacgaaaccttattgtaggcatattataccaaaaggaacttcaagtgtacgtattcattgaaatctaccttattgtaggcatattataccaaaaggaacttcaagtgtacgtattcatttaaatctagtcagactccctactctgtagaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="83513" stop="101112"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100107" g_stop="100261" g_length="155"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="155" r_length="155" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="100262" i_stop="100419" i_length="158">
            <donor d_prob="0.935" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="100420" g_stop="100812" g_length="393"/>
          <reference_exon_boundary r_type="cDNA" r_start="156" r_stop="548" r_length="393" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-E555136" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>548</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E555136" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100107" e_stop="100261"/>
          <exon e_start="100420" e_stop="100812"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTCAACTGGACCTGTAGCTCTACTCTCTGGTCTTGATCCTAATCCAATGAGCTTGGTGCTCCATTTCTTTGCAGTGGCCGTTTATGGAGTTGGTCGTTTACTTGTACCTTTTCCTTCTCCAAAGAAGTTGTGGATCGGAGCTAAATTAATATTGGTATGTACCTTAAATGTAGTATTCAAACTGTCTTCGTTGACTCTGAGCATGTGTGTGTTATATATTGAGCTACTTTCCAGTTGAAATTCCTACATACTCGTTCACCTTGTTTGAAAGTCTTGACCATTTTGGCATGCATGCTCTTTTTTTTTGTTCAGTCTGCATCAGGCATCATATTTCCCATCATAAAGGCAGAAGGGATCCGGCAAATGTTCTTTCCAACAACAATACCAGCATATCACAGAGCTCCTCCCGTGAAGACGGAGTCAGATTAAGCAGAAAATTTGTTGAAGTTTTGTTCCATGAATAGCATTAACATTTTTGCAGTTCCTTTCTCGAAGCACGAAATGTAAGTTCCACTCTCCCCTCACCCCAAACCCTACAAATAGAATAAGAATGACGACGAAACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTGAAATCTACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTTAAATCTAGTCAGACTCCCTACTCTGTAGAA</genome_strand>
        <mrna_strand>GTTCAACTGGACCTGTAGCTCTACTCTCTGGTCTTGATCCTAATCCAATGAGCTTGGTGCTCCATTTCTTTGCAGTGGCCGTTTATGGAGTTGGTCGTTTACTTGTACCTTTTCCTTCTCCAAAGAAGTTGTGGATCGGAGCTAAATTAATATTG..............................................................................................................................................................TCTGCATCAGGCATCATATTTCCCATCATAAAGGCAGAAGGGATCCGGCAAATGTTCTTTCCAACAACAATACCAGCATATCACAGAGCTCCTCCCGTGAAGACGGAGTCAGATTAAGCAGAAAATTTGTTGAAGTTTTGTTCCATGAATAGCATTAACATTTTTGCAGTTCCTTTCTCGAAGCACGAAATGTAAGTTCCACTCTCCCCTCACCCCAAACCCTACAAATAGAATAAGAATGACGACGAAACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTGAAATCTACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTTAAATCTAGTCAGACTCCCTACTCTGTAGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E350820" ref_strand="+" ref_description="SGN-E350820 [cTOS-7-E3]">
      <seq>tctggtcttgatcctaatccaatgagcttggtgctccatttctttgcagtggccgtttatggagttggtcgtttacttgtaccttttccttctccaaagaagttgtggatcggagctaaattaatattgtctgcatcaggcatcatatttcccatcataaaggcagaagggatccggcaaatgttctttccaacaacaataccagcatatcacagagctcctcccgtgaagacggagtcagattaagcagaaaatttgttgaagttttgttccatgaatagcattaacatttttgcagttcctttctcgaagcacgaaatgtaagttccactctcccctcaccccaaacccttacaatagaataagaatgacgacgaaaccttattgtaggcatattataccaaaagggacttcaagtgtacgtattcattgaaatctaccttattgtangcatattataccaaaaggaacttcaagtgtacgtattcattttaatctagtcagactccctactctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="83539" stop="101107"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100133" g_stop="100261" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="129" r_length="129" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="100262" i_stop="100419" i_length="158">
            <donor d_prob="0.935" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="100420" g_stop="100807" g_length="388"/>
          <reference_exon_boundary r_type="cDNA" r_start="130" r_stop="517" r_length="388" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-E350820" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>517</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E350820" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100133" e_stop="100261"/>
          <exon e_start="100420" e_stop="100807"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTGGTCTTGATCCTAATCCAATGAGCTTGGTGCTCCATTTCTTTGCAGTGGCCGTTTATGGAGTTGGTCGTTTACTTGTACCTTTTCCTTCTCCAAAGAAGTTGTGGATCGGAGCTAAATTAATATTGGTATGTACCTTAAATGTAGTATTCAAACTGTCTTCGTTGACTCTGAGCATGTGTGTGTTATATATTGAGCTACTTTCCAGTTGAAATTCCTACATACTCGTTCACCTTGTTTGAAAGTCTTGACCATTTTGGCATGCATGCTCTTTTTTTTTGTTCAGTCTGCATCAGGCATCATATTTCCCATCATAAAGGCAGAAGGGATCCGGCAAATGTTCTTTCCAACAACAATACCAGCATATCACAGAGCTCCTCCCGTGAAGACGGAGTCAGATTAAGCAGAAAATTTGTTGAAGTTTTGTTCCATGAATAGCATTAACATTTTTGCAGTTCCTTTCTCGAAGCACGAAATGTAAGTTCCACTCTCCCCTCACCCCAAACCCTACAAATAGAATAAGAATGACGACGAAACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTGAAATCTACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTTAAATCTAGTCAGACTCCCTACTCTG</genome_strand>
        <mrna_strand>TCTGGTCTTGATCCTAATCCAATGAGCTTGGTGCTCCATTTCTTTGCAGTGGCCGTTTATGGAGTTGGTCGTTTACTTGTACCTTTTCCTTCTCCAAAGAAGTTGTGGATCGGAGCTAAATTAATATTG..............................................................................................................................................................TCTGCATCAGGCATCATATTTCCCATCATAAAGGCAGAAGGGATCCGGCAAATGTTCTTTCCAACAACAATACCAGCATATCACAGAGCTCCTCCCGTGAAGACGGAGTCAGATTAAGCAGAAAATTTGTTGAAGTTTTGTTCCATGAATAGCATTAACATTTTTGCAGTTCCTTTCTCGAAGCACGAAATGTAAGTTCCACTCTCCCCTCACCCCAAACCCTTACAATAGAATAAGAATGACGACGAAACCTTATTGTAGGCATATTATACCAAAAGGGACTTCAAGTGTACGTATTCATTGAAATCTACCTTATTGTANGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTTTAATCTAGTCAGACTCCCTACTCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E303930" ref_strand="+" ref_description="SGN-E303930 [cLEX-4-O10]">
      <seq>catttctttgcagtggccgtttatggagttggtcgtttacttgtaccttttccttctccaaagaagttgtggatcggagctaaattaatattgtctgcatcaggcatcatatttcccatcataaaggcagaagggatccggcaaatgttctttccaacaacaataccagcatatcacagagctcctcccgtgaagacggagtcagattaagcagaaaatttgttgaagttttgttccatgaatagcattaacatttttgcagttcctttctcgaagcacgaaatgtaagttccactctcccctcaccccaaaccctacaaatagaataagaatgacgacgaaaccttattgtaggcatattataccaaaaggaacttcaagtgtacgtattcattgaaatctaccttattgtaggcatattataccaaaaggaacttcaagtgtacgtattcatttaaatctagtcagactccctactctgtagaaatgtatattgtggcattcactttatatcttagagagttcaatttgtacgtcagttgtagctctgagatagacatcaacggttatgtttctgtattgtacatcacattgatgtatgtatcag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="83575" stop="101233"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100169" g_stop="100261" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="93" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="100262" i_stop="100419" i_length="158">
            <donor d_prob="0.935" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="100420" g_stop="100933" g_length="514"/>
          <reference_exon_boundary r_type="cDNA" r_start="94" r_stop="607" r_length="514" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-E303930" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>607</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E303930" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100169" e_stop="100261"/>
          <exon e_start="100420" e_stop="100933"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATTTCTTTGCAGTGGCCGTTTATGGAGTTGGTCGTTTACTTGTACCTTTTCCTTCTCCAAAGAAGTTGTGGATCGGAGCTAAATTAATATTGGTATGTACCTTAAATGTAGTATTCAAACTGTCTTCGTTGACTCTGAGCATGTGTGTGTTATATATTGAGCTACTTTCCAGTTGAAATTCCTACATACTCGTTCACCTTGTTTGAAAGTCTTGACCATTTTGGCATGCATGCTCTTTTTTTTTGTTCAGTCTGCATCAGGCATCATATTTCCCATCATAAAGGCAGAAGGGATCCGGCAAATGTTCTTTCCAACAACAATACCAGCATATCACAGAGCTCCTCCCGTGAAGACGGAGTCAGATTAAGCAGAAAATTTGTTGAAGTTTTGTTCCATGAATAGCATTAACATTTTTGCAGTTCCTTTCTCGAAGCACGAAATGTAAGTTCCACTCTCCCCTCACCCCAAACCCTACAAATAGAATAAGAATGACGACGAAACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTGAAATCTACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTTAAATCTAGTCAGACTCCCTACTCTGTAGAAATGTATATTGTGGCATTCACTTTATATCTTAGAGAGTTCAATTTGTACGTCAGTTGTAGCTCTGAGATAGACATCAACGGTTATGTTTCTGTATTGTACATCACATTGATGTATGTATCAG</genome_strand>
        <mrna_strand>CATTTCTTTGCAGTGGCCGTTTATGGAGTTGGTCGTTTACTTGTACCTTTTCCTTCTCCAAAGAAGTTGTGGATCGGAGCTAAATTAATATTG..............................................................................................................................................................TCTGCATCAGGCATCATATTTCCCATCATAAAGGCAGAAGGGATCCGGCAAATGTTCTTTCCAACAACAATACCAGCATATCACAGAGCTCCTCCCGTGAAGACGGAGTCAGATTAAGCAGAAAATTTGTTGAAGTTTTGTTCCATGAATAGCATTAACATTTTTGCAGTTCCTTTCTCGAAGCACGAAATGTAAGTTCCACTCTCCCCTCACCCCAAACCCTACAAATAGAATAAGAATGACGACGAAACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTGAAATCTACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTTAAATCTAGTCAGACTCCCTACTCTGTAGAAATGTATATTGTGGCATTCACTTTATATCTTAGAGAGTTCAATTTGTACGTCAGTTGTAGCTCTGAGATAGACATCAACGGTTATGTTTCTGTATTGTACATCACATTGATGTATGTATCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E277554" ref_strand="+" ref_description="SGN-E277554 [cLER-6-A2]">
      <seq>tttttttgacgtacaaattgaactctctaagatataaagtgaatgccacaatatacatttctacagagtagggagtctgactagatttaaatgaatacgtacacttgaagttccttttggtataatatgcctacaataaggtagatttcaatgaatacgtacacttgaagttccttttggtataatatgcctacaataaggtttcgtcgtcattcttattctatttgtagggtttggggtgaggggag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="101164" stop="100323"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100870" g_stop="100623" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="248" r_length="248" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-E277554" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>248</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E277554" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100870" e_stop="100623"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACAACTGACGTACAAATTGAACTCTCTAAGATATAAAGTGAATGCCACAATATACATTTCTACAGAGTAGGGAGTCTGACTAGATTTAAATGAATACGTACACTTGAAGTTCCTTTTGGTATAATATGCCTACAATAAGGTAGATTTCAATGAATACGTACACTTGAAGTTCCTTTTGGTATAATATGCCTACAATAAGGTTTCGTCGTCATTCTTATTCTATTTGTAGGGTTTGGGGTGAGGGGAG</genome_strand>
        <mrna_strand>TTTTTTTGACGTACAAATTGAACTCTCTAAGATATAAAGTGAATGCCACAATATACATTTCTACAGAGTAGGGAGTCTGACTAGATTTAAATGAATACGTACACTTGAAGTTCCTTTTGGTATAATATGCCTACAATAAGGTAGATTTCAATGAATACGTACACTTGAAGTTCCTTTTGGTATAATATGCCTACAATAAGGTTTCGTCGTCATTCTTATTCTATTTGTAGGGTTTGGGGTGAGGGGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E747246" ref_strand="+" ref_description="SGN-E747246 [GI|14715591]">
      <seq>acatagcaacaatcttctctaaatattttctgcctctcaaaacaaacataaaaaaattcaagtgcaaatgaagcttttatcgaagaaagccatgtgtaactcacatggacaagattcttcctactttctaggatgggaagagtatcagaaaaacccatatgatgaaattcgtaatcctaaaggaatcattcagatgggtctcgcagagaatcagctctctttcgatttattagagtcatggcttactctaaatccagatgcatctgcatttaagagaaatggccactcaatatttagagagctttccttatttcaagattaccatggtcttccagctttcaaagatgcattggttcaattcatgtctgaaatcagaggaaacaaagtaagctttgattcaaataagcttgtacttacagctggtgctacttctgcaaatgagacactcatgttttgcctcgctgatcctggccatgcttttctccttcccactccatactaccctggatttgatagagacttaaaatggagaacaggagctgagattgttccaatacaatgcacaagttcaaacggatttagaatcacagaatcagctcttgaagaagcttatacagaagccgaaaggcgaaaccttagagtgaaaggggttttagtcactaacccttcgaatccattaggcacaacattaaccaaaaaagaactccaacttcttcttaccttcgtatctacaaaacaaatccatctcatcagtgatgagatatattctggcactgtttttaactcacctaaattcgtcagtgtcatggaagtactaatcgaaaacaactacatgtacactgatgtatgggatagagttcacatagtctatagtctttcgaaagatttgggacttccaggatttcgagttggtgccatttattccaacgacgatagggtcgtctctgcagccacaaaaatgtctagttttggattaatttcatctcaaactcaataccttctttctgctttgctatcagacaaaaagttcacgaaaaattacgtgtctgaaaatcaaaagaggctgaaaaaacgacatgaaatgctagttggtggtcttaaacaaattggaataaggtgccttgagagcaatgctgggttgttttgttgggtggatatgagacatcttttaagttcaaacacatttgatggagaaatggaattatggaagaaaatagtgtacgaagtagggctaaatatttcagctggatcgtcatgccattgtacagaaccgggttggtttcgtgcatgttttgctaacatgtcagaagatacgttaaatatcgccatacaacgtttgaaggcttttgttgattcaagggttaataacaaggatgatattcaaaatcagcagcagtgttctaataagaagaagtcattttccaaatgggtttttcgactatcgttcaatgaacgtcaaagagaacgatagtctagccatgtgaaagttcgtaaattcatttttgtttttttaaatctcgatagttaattagatgttgagatttctaaaagattttgtaccataatacatacttttaaattgttttaattgtagagggtcactgtccatttgattggacga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="104236" stop="101817"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="103936" g_stop="103591" g_length="346"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="346" r_length="346" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="103590" i_stop="103488" i_length="103">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="103487" g_stop="103327" g_length="161"/>
          <reference_exon_boundary r_type="cDNA" r_start="347" r_stop="507" r_length="161" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="103326" i_stop="103231" i_length="96">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="103230" g_stop="102117" g_length="1114"/>
          <reference_exon_boundary r_type="cDNA" r_start="508" r_stop="1621" r_length="1114" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-E747246" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1621</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E747246" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="103936" e_stop="103591"/>
          <exon e_start="103487" e_stop="103327"/>
          <exon e_start="103230" e_stop="102117"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACATAGCAACAATCTTCTCTAAATATTTTCTGCCTCTCAAAACAAACATAAAAAAATTCAAGTGCAAATGAAGCTTTTATCGAAGAAAGCCATGTGTAACTCACATGGACAAGATTCTTCCTACTTTCTAGGATGGGAAGAGTATCAGAAAAACCCATATGATGAAATTCGTAATCCTAAAGGAATCATTCAGATGGGTCTCGCAGAGAATCAGCTCTCTTTCGATTTATTAGAGTCATGGCTTACTCTAAATCCAGATGCATCTGCATTTAAGAGAAATGGCCACTCAATATTTAGAGAGCTTTCCTTATTTCAAGATTACCATGGTCTTCCAGCTTTCAAAGATGTAAGTTTGTGATTGCAGTCGAATTTGACTTATATACACTGACTAACGTAACTGACTTATCATATATTTATTATTAACTTCACAACCTCACATTGTAATGCAGGCATTGGTTCAATTCATGTCTGAAATCAGAGGAAACAAAGTAAGCTTTGATTCAAATAAGCTTGTACTTACAGCTGGTGCTACTTCTGCAAATGAGACACTCATGTTTTGCCTCGCTGATCCTGGCCATGCTTTTCTCCTTCCCACTCCATACTACCCTGGGTACGTTTAGTTTACACTCACATTATTATTGATCGTCTATTTTAACACAGGGCGAACTATGTACTTTACTAATTATGATATTGTGTAATAATGCAGATTTGATAGAGACTTAAAATGGAGAACAGGAGCTGAGATTGTTCCAATACAATGCACAAGTTCAAACGGATTTAGAATCACAGAATCAGCTCTTGAAGAAGCTTATACAGAAGCCGAAAGGCGAAACCTTAGAGTGAAAGGGGTTTTAGTCACTAACCCTTCGAATCCATTAGGCACAACATTAACCAAAAAAGAACTCCAACTTCTTCTTACCTTCGTATCTACAAAACAAATCCATCTCATCAGTGATGAGATATATTCTGGCACTGTTTTTAACTCACCTAAATTCGTCAGTGTCATGGAAGTACTAATCGAAAACAACTACATGTACACTGATGTATGGGATAGAGTTCACATAGTCTATAGTCTTTCGAAAGATTTGGGACTTCCAGGATTTCGAGTTGGTGCCATTTATTCCAACGACGATAGGGTCGTCTCTGCAGCCACAAAAATGTCTAGTTTTGGATTAATTTCATCTCAAACTCAATACCTTCTTTCTGCTTTGCTATCAGACAAAAAGTTCACGAAAAATTACGTGTCTGAAAATCAAAAGAGGCTGAAAAAACGACATGAAATGCTAGTTGGTGGTCTTAAACAAATTGGAATAAGGTGCCTTGAGAGCAATGCTGGGTTGTTTTGTTGGGTGGATATGAGACATCTTTTAAGTTCAAACACATTTGATGGAGAAATGGAATTATGGAAGAAAATAGTGTACGAAGTAGGGCTAAATATTTCAGCTGGATCGTCATGCCATTGTACAGAACCGGGTTGGTTTCGTGCATGTTTTGCTAACATGTCAGAAGATACGTTAAATATCGCCATACAACGTTTGAAGGCTTTTGTTGATTCAAGGGTTAATAACAAGGATGATATTCAAAATCAGCAGCAGTGTTCTAATAAGAAGAAGTCATTTTCCAAATGGGTTTTTCGACTATCGTTCAATGAACGTCAAAGAGAACGATAGTCTAGTCATGTGAAAGTTCGTAAATTCATTTTTGTTTTTTTAAATCTCGATAGTTAATTAGATGTTGAGATTTCTAAAAGATTTTGTACCATAATACATACTTTTAAATTGTTTTAATTGTAGAGGGTCACTGTCCATTTGATTGGACGA</genome_strand>
        <mrna_strand>ACATAGCAACAATCTTCTCTAAATATTTTCTGCCTCTCAAAACAAACATAAAAAAATTCAAGTGCAAATGAAGCTTTTATCGAAGAAAGCCATGTGTAACTCACATGGACAAGATTCTTCCTACTTTCTAGGATGGGAAGAGTATCAGAAAAACCCATATGATGAAATTCGTAATCCTAAAGGAATCATTCAGATGGGTCTCGCAGAGAATCAGCTCTCTTTCGATTTATTAGAGTCATGGCTTACTCTAAATCCAGATGCATCTGCATTTAAGAGAAATGGCCACTCAATATTTAGAGAGCTTTCCTTATTTCAAGATTACCATGGTCTTCCAGCTTTCAAAGAT.......................................................................................................GCATTGGTTCAATTCATGTCTGAAATCAGAGGAAACAAAGTAAGCTTTGATTCAAATAAGCTTGTACTTACAGCTGGTGCTACTTCTGCAAATGAGACACTCATGTTTTGCCTCGCTGATCCTGGCCATGCTTTTCTCCTTCCCACTCCATACTACCCTGG................................................................................................ATTTGATAGAGACTTAAAATGGAGAACAGGAGCTGAGATTGTTCCAATACAATGCACAAGTTCAAACGGATTTAGAATCACAGAATCAGCTCTTGAAGAAGCTTATACAGAAGCCGAAAGGCGAAACCTTAGAGTGAAAGGGGTTTTAGTCACTAACCCTTCGAATCCATTAGGCACAACATTAACCAAAAAAGAACTCCAACTTCTTCTTACCTTCGTATCTACAAAACAAATCCATCTCATCAGTGATGAGATATATTCTGGCACTGTTTTTAACTCACCTAAATTCGTCAGTGTCATGGAAGTACTAATCGAAAACAACTACATGTACACTGATGTATGGGATAGAGTTCACATAGTCTATAGTCTTTCGAAAGATTTGGGACTTCCAGGATTTCGAGTTGGTGCCATTTATTCCAACGACGATAGGGTCGTCTCTGCAGCCACAAAAATGTCTAGTTTTGGATTAATTTCATCTCAAACTCAATACCTTCTTTCTGCTTTGCTATCAGACAAAAAGTTCACGAAAAATTACGTGTCTGAAAATCAAAAGAGGCTGAAAAAACGACATGAAATGCTAGTTGGTGGTCTTAAACAAATTGGAATAAGGTGCCTTGAGAGCAATGCTGGGTTGTTTTGTTGGGTGGATATGAGACATCTTTTAAGTTCAAACACATTTGATGGAGAAATGGAATTATGGAAGAAAATAGTGTACGAAGTAGGGCTAAATATTTCAGCTGGATCGTCATGCCATTGTACAGAACCGGGTTGGTTTCGTGCATGTTTTGCTAACATGTCAGAAGATACGTTAAATATCGCCATACAACGTTTGAAGGCTTTTGTTGATTCAAGGGTTAATAACAAGGATGATATTCAAAATCAGCAGCAGTGTTCTAATAAGAAGAAGTCATTTTCCAAATGGGTTTTTCGACTATCGTTCAATGAACGTCAAAGAGAACGATAGTCTAGCCATGTGAAAGTTCGTAAATTCATTTTTGTTTTTTTAAATCTCGATAGTTAATTAGATGTTGAGATTTCTAAAAGATTTTGTACCATAATACATACTTTTAAATTGTTTTAATTGTAGAGGGTCACTGTCCATTTGATTGGACGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E747246" ref_strand="+" ref_description="SGN-E747246 [GI|14715591]">
      <seq>acatagcaacaatcttctctaaatattttctgcctctcaaaacaaacataaaaaaattcaagtgcaaatgaagcttttatcgaagaaagccatgtgtaactcacatggacaagattcttcctactttctaggatgggaagagtatcagaaaaacccatatgatgaaattcgtaatcctaaaggaatcattcagatgggtctcgcagagaatcagctctctttcgatttattagagtcatggcttactctaaatccagatgcatctgcatttaagagaaatggccactcaatatttagagagctttccttatttcaagattaccatggtcttccagctttcaaagatgcattggttcaattcatgtctgaaatcagaggaaacaaagtaagctttgattcaaataagcttgtacttacagctggtgctacttctgcaaatgagacactcatgttttgcctcgctgatcctggccatgcttttctccttcccactccatactaccctggatttgatagagacttaaaatggagaacaggagctgagattgttccaatacaatgcacaagttcaaacggatttagaatcacagaatcagctcttgaagaagcttatacagaagccgaaaggcgaaaccttagagtgaaaggggttttagtcactaacccttcgaatccattaggcacaacattaaccaaaaaagaactccaacttcttcttaccttcgtatctacaaaacaaatccatctcatcagtgatgagatatattctggcactgtttttaactcacctaaattcgtcagtgtcatggaagtactaatcgaaaacaactacatgtacactgatgtatgggatagagttcacatagtctatagtctttcgaaagatttgggacttccaggatttcgagttggtgccatttattccaacgacgatagggtcgtctctgcagccacaaaaatgtctagttttggattaatttcatctcaaactcaataccttctttctgctttgctatcagacaaaaagttcacgaaaaattacgtgtctgaaaatcaaaagaggctgaaaaaacgacatgaaatgctagttggtggtcttaaacaaattggaataaggtgccttgagagcaatgctgggttgttttgttgggtggatatgagacatcttttaagttcaaacacatttgatggagaaatggaattatggaagaaaatagtgtacgaagtagggctaaatatttcagctggatcgtcatgccattgtacagaaccgggttggtttcgtgcatgttttgctaacatgtcagaagatacgttaaatatcgccatacaacgtttgaaggcttttgttgattcaagggttaataacaaggatgatattcaaaatcagcagcagtgttctaataagaagaagtcattttccaaatgggtttttcgactatcgttcaatgaacgtcaaagagaacgatagtctagccatgtgaaagttcgtaaattcatttttgtttttttaaatctcgatagttaattagatgttgagatttctaaaagattttgtaccataatacatacttttaaattgttttaattgtagagggtcactgtccatttgattggacga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="109957" stop="112249"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="110257" g_stop="110602" g_length="346"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="346" r_length="346" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="110603" i_stop="110705" i_length="103">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="110706" g_stop="110866" g_length="161"/>
          <reference_exon_boundary r_type="cDNA" r_start="347" r_stop="507" r_length="161" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="110867" i_stop="110962" i_length="96">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="110963" g_stop="111949" g_length="987"/>
          <reference_exon_boundary r_type="cDNA" r_start="508" r_stop="1494" r_length="987" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-E747246" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>1494</cumulative_length_of_scored_exons>
        <coverage percentage="0.922" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E747246" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="110257" e_stop="110602"/>
          <exon e_start="110706" e_stop="110866"/>
          <exon e_start="110963" e_stop="111949"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACATAGCAACAATCTTCTCTAAATATTTTCTGCCTCTCAAAACAAACATAAAAAAATTCAAGTGCAAATGAAGCTTTTATCGAAGAAAGCCATGTGTAACTCACATGGACAAGATTCTTCCTACTTTCTAGGATGGGAAGAGTATCAGAAAAACCCATATGATGAAATTCGTAATCCTAAAGGAATCATTCAGATGGGTCTCGCAGAGAATCAGCTCTCTTTCGATTTATTAGAGTCATGGCTTACTCTAAATCCAGATGCATCTGCATTTAAGAGAAATGGCCACTCAATATTTAGAGAGCTTTCCTTATTTCAAGATTACCATGGTCTTCCAGCTTTCAAAGATGTAAGTTTGTGATTGCAGTCGAATTTGACTTATATACACTGACTAACGTAACTGACTTATCATATATTTATTATTAACTTCACAACCTCACATTGTAATGCAGGCATTGGTTCAATTCATGTCTGAAATCAGAGGAAACAAAGTAAGCTTTGATTCAAATAAGCTTGTACTTACAGCTGGTGCTACTTCTGCAAATGAGACACTCATGTTTTGCCTCGCTGATCCTGGCCATGCTTTTCTCCTTCCCACTCCATACTACCCTGGGTACGTTTAGTTTACACTCACATTATTATTGATCGTCTATTTTAACACAGGGCGAACTATGTACTTTACTAATTATGATATTGTGTAATAATGCAGATTTGATAGAGACTTAAAATGGAGAACAGGAGCTGAGATTGTTCCAATACAATGCACAAGTTCAAACGGATTTAGAATCACAGAATCAGCTCTTGAAGAAGCTTATACAGAAGCCGAAAGGCGAAACCTTAGAGTGAAAGGGGTTTTAGTCACTAACCCTTCGAATCCATTAGGCACAACATTAACCAAAAAAGAACTCCAACTTCTTCTTACCTTCGTATCTACAAAACAAATCCATCTCATCAGTGATGAGATATATTCTGGCACTGTTTTTAACTCACCTAAATTCGTCAGTGTCATGGAAGTACTAATCGAAAACAACTACATGTACACTGATGTATGGGATAGAGTTCACATAGTCTATAGTCTTTCGAAAGATTTGGGACTTCCAGGATTTCGAGTTGGTGCCATTTATTCCAACGACGATAGGGTCGTCTCTGCAGCCACAAAAATGTCTAGTTTTGGATTAATTTCATCTCAAACTCAATACCTTCTTTCTGCTTTGCTATCAGACAAAAAGTTCACGAAAAATTACGTGTCTGAAAATCAAAAGAGGCTGAAAAAACGACATGAAATGCTAGTTGGTGGTCTTAAACAAATTGGAATAAGGTGCCTTGAGAGCAATGCTGGGTTGTTTTGTTGGGTGGATATGAGACATCTTTTAAGTTCAAACACATTTGATGGAGAAATGGAATTATGGAAGAAAATAGTGTACGAAGTAGGGCTAAATATTTCAGCTGGATCGTCATGCCATTGTACAGAACCGGGTTGGTTTCGTGCATGTTTTGCTAACATGTCAGAAGATACGTTAAATATCGCCATACAACGTTTGAAGGCTTTTGTTGATTCAAGGGTTAATAACAAGGATGATATTCAAAATCAGCAGCAGTGTTCTAATAAGAAGAAGTCATTTTCCAAATGGGTTTTTCGACTATCGTTCAATGAACGTCAAAGAGAACGATAGTCTAGACATACGAAAGTTACTAA</genome_strand>
        <mrna_strand>ACATAGCAACAATCTTCTCTAAATATTTTCTGCCTCTCAAAACAAACATAAAAAAATTCAAGTGCAAATGAAGCTTTTATCGAAGAAAGCCATGTGTAACTCACATGGACAAGATTCTTCCTACTTTCTAGGATGGGAAGAGTATCAGAAAAACCCATATGATGAAATTCGTAATCCTAAAGGAATCATTCAGATGGGTCTCGCAGAGAATCAGCTCTCTTTCGATTTATTAGAGTCATGGCTTACTCTAAATCCAGATGCATCTGCATTTAAGAGAAATGGCCACTCAATATTTAGAGAGCTTTCCTTATTTCAAGATTACCATGGTCTTCCAGCTTTCAAAGAT.......................................................................................................GCATTGGTTCAATTCATGTCTGAAATCAGAGGAAACAAAGTAAGCTTTGATTCAAATAAGCTTGTACTTACAGCTGGTGCTACTTCTGCAAATGAGACACTCATGTTTTGCCTCGCTGATCCTGGCCATGCTTTTCTCCTTCCCACTCCATACTACCCTGG................................................................................................ATTTGATAGAGACTTAAAATGGAGAACAGGAGCTGAGATTGTTCCAATACAATGCACAAGTTCAAACGGATTTAGAATCACAGAATCAGCTCTTGAAGAAGCTTATACAGAAGCCGAAAGGCGAAACCTTAGAGTGAAAGGGGTTTTAGTCACTAACCCTTCGAATCCATTAGGCACAACATTAACCAAAAAAGAACTCCAACTTCTTCTTACCTTCGTATCTACAAAACAAATCCATCTCATCAGTGATGAGATATATTCTGGCACTGTTTTTAACTCACCTAAATTCGTCAGTGTCATGGAAGTACTAATCGAAAACAACTACATGTACACTGATGTATGGGATAGAGTTCACATAGTCTATAGTCTTTCGAAAGATTTGGGACTTCCAGGATTTCGAGTTGGTGCCATTTATTCCAACGACGATAGGGTCGTCTCTGCAGCCACAAAAATGTCTAGTTTTGGATTAATTTCATCTCAAACTCAATACCTTCTTTCTGCTTTGCTATCAGACAAAAAGTTCACGAAAAATTACGTGTCTGAAAATCAAAAGAGGCTGAAAAAACGACATGAAATGCTAGTTGGTGGTCTTAAACAAATTGGAATAAGGTGCCTTGAGAGCAATGCTGGGTTGTTTTGTTGGGTGGATATGAGACATCTTTTAAGTTCAAACACATTTGATGGAGAAATGGAATTATGGAAGAAAATAGTGTACGAAGTAGGGCTAAATATTTCAGCTGGATCGTCATGCCATTGTACAGAACCGGGTTGGTTTCGTGCATGTTTTGCTAACATGTCAGAAGATACGTTAAATATCGCCATACAACGTTTGAAGGCTTTTGTTGATTCAAGGGTTAATAACAAGGATGATATTCAAAATCAGCAGCAGTGTTCTAATAAGAAGAAGTCATTTTCCAAATGGGTTTTTCGACTATCGTTCAATGAACGTCAAAGAGAACGATAGTCTAGCCATGTGAAAGTTCGTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E396504" ref_strand="+" ref_description="SGN-E396504 [TUS-24-O15]">
      <seq>ccggcgctgcccaaaactcagccaagcctcctcacctatacggctcctttactaatccctcagcagcttgttaattaattagtacagtatgcaaatcgtcttgttgaatttatttttaattaatgtcttgttgattaactagattcttaggaaatctcccaaaacttattaagatttttattttttttaatttgtactataatgaaatgacttgtatagttcatttgttaattagagatttcctaatcattaatcaatattctatttactcatttgtttctttaatttgtcgcagtgcagctatgtaaattgttaagaaatatatttatttttggtaatcaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="125622" stop="57899"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125322" g_stop="124980" g_length="343"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="343" r_length="343" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="124979" i_stop="124105" i_length="875">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.772" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="124104" g_stop="124092" g_length="13"/>
          <reference_exon_boundary r_type="cDNA" r_start="344" r_stop="356" r_length="13" r_score="0.692"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-E396504" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>356</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E396504" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125322" e_stop="124980"/>
          <exon e_start="124104" e_stop="124092"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGGCGCTGCCCAAAACTCAGCCAAGCCTCCTCACCTATACGGCTCCTTTACTAATCCCTCAGCAGCTTGTTAATTAATTAGTACAGTATGCAAATCGTCTTGTTGAATTTATTTTTAATTAATGTCTTGTTGATTAACTAGATTCTTAGGAAATCTCCCAAAACTTATTAAGATTTTTATTTTTTTTAATTTGTACTATAATGAAATGACTTGTATAGTTCATTTGTTAATTAGAGATTTCCTAATCATTAATCAATATTCTATTTACTCATTTGTTTCTTTAATTTGTCGCAGTGCAGCTATGTAAATTGTTAAGAAATATATTTATTTTTGGTAATCTATGTTTCTTCATCTCCTGATCATTTTCAAATTACTTAGAGATATTATTTTGAGTTTAGCTTAATATATACTGAGATTTGTAAAGAACTTTAGATTATCAATTCAATAAACAGGGGATGCGTGTTGATTTCCAAAAATTCAATAATTTTTTTCGAAATTCTATAATTACATCGATAATTCTTTTAATGACATCAACATATAAAGACGGGAACCATTAACAACCGGAAGGATAATCACATTTGTATATTCTAGAAAACCTTTATTAGAACCGTAAAATCAAAATTCTAAAGATAATAAAAAACAGATTATCGAGTATATATATTTAAAAATTAGGTAGGTGTTGCCTGTTGTGTTGGTCCATTTAAATGTAATTATACTAAAAAGTTGGTCTATATACTATTAAATCTCAATGTATACATTTCCACGTTTTGTTGCGTCATTGGATGTAAATTTATTTTCTTCTAATTTATGTGGGTGTTTTTTTTTTTTGTTTAAAAACATTTATTAATCATATGATCAATAGAAACAATGTCTATGATTTTATTTTGATTCATAAATTTTAAGAGTTTCTCTAAAAAAATTTAAATTATGAATCAATTAAATAATATTATATAAATTAAAATAGAAAAAATAATACAAACAATATGCATGATCTAGTTGTTCTCTCTCTATAATATATTTACTCCATTTCACAAAGAATGACATGATTTGACTTGACATGGAGTTTAAGAATATAAAAAAGATTTCTGAATTTTGTGGTCCTAAATTAAAGTAAGGTCAAATATATTAAAAAATTACACTTTAATCTTATGGCCTTAAACATGGCACGTGGAAAATTGAAATTAAAATATTATAAAAAAATCATTCTTTTTAAATAGATTAAAAAAAGAT</genome_strand>
        <mrna_strand>CCGGCGCTGCCCAAAACTCAGCCAAGCCTCCTCACCTATACGGCTCCTTTACTAATCCCTCAGCAGCTTGTTAATTAATTAGTACAGTATGCAAATCGTCTTGTTGAATTTATTTTTAATTAATGTCTTGTTGATTAACTAGATTCTTAGGAAATCTCCCAAAACTTATTAAGATTTTTATTTTTTTTAATTTGTACTATAATGAAATGACTTGTATAGTTCATTTGTTAATTAGAGATTTCCTAATCATTAATCAATATTCTATTTACTCATTTGTTTCTTTAATTTGTCGCAGTGCAGCTATGTAAATTGTTAAGAAATATATTTATTTTTGGTAATCAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E391664" ref_strand="+" ref_description="SGN-E391664 [TUS-24-O15](-)">
      <seq>taatccctcagcggcctgttaattaaatagtacagtatgcaaatcgtcttgttgaattaatttttaattaatgtcctgttgattaactagattcttaggaaatctcccaaaacttattaagatttttattttttttaatttgtactataatgaaatgacttgtatagttcatttgttaattagagatttcctaatcattaatcaatattctatttactcatttgtttctttaatttgtcgcagagcagctatgtaaattgttaagaaatatatttatttttggtaatcaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="125570" stop="57899"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125270" g_stop="124980" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="291" r_length="291" r_score="0.973"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="124979" i_stop="124105" i_length="875">
            <donor d_prob="0.000" d_score="0.94"/>
            <acceptor a_prob="0.772" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="124104" g_stop="124092" g_length="13"/>
          <reference_exon_boundary r_type="cDNA" r_start="292" r_stop="304" r_length="13" r_score="0.692"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-E391664" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>304</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E391664" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125270" e_stop="124980"/>
          <exon e_start="124104" e_stop="124092"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAATCCCTCAGCAGCTTGTTAATTAATTAGTACAGTATGCAAATCGTCTTGTTGAATTTATTTTTAATTAATGTCTTGTTGATTAACTAGATTCTTAGGAAATCTCCCAAAACTTATTAAGATTTTTATTTTTTTTAATTTGTACTATAATGAAATGACTTGTATAGTTCATTTGTTAATTAGAGATTTCCTAATCATTAATCAATATTCTATTTACTCATTTGTTTCTTTAATTTGTCGCAGTGCAGCTATGTAAATTGTTAAGAAATATATTTATTTTTGGTAATCTATGTTTCTTCATCTCCTGATCATTTTCAAATTACTTAGAGATATTATTTTGAGTTTAGCTTAATATATACTGAGATTTGTAAAGAACTTTAGATTATCAATTCAATAAACAGGGGATGCGTGTTGATTTCCAAAAATTCAATAATTTTTTTCGAAATTCTATAATTACATCGATAATTCTTTTAATGACATCAACATATAAAGACGGGAACCATTAACAACCGGAAGGATAATCACATTTGTATATTCTAGAAAACCTTTATTAGAACCGTAAAATCAAAATTCTAAAGATAATAAAAAACAGATTATCGAGTATATATATTTAAAAATTAGGTAGGTGTTGCCTGTTGTGTTGGTCCATTTAAATGTAATTATACTAAAAAGTTGGTCTATATACTATTAAATCTCAATGTATACATTTCCACGTTTTGTTGCGTCATTGGATGTAAATTTATTTTCTTCTAATTTATGTGGGTGTTTTTTTTTTTTGTTTAAAAACATTTATTAATCATATGATCAATAGAAACAATGTCTATGATTTTATTTTGATTCATAAATTTTAAGAGTTTCTCTAAAAAAATTTAAATTATGAATCAATTAAATAATATTATATAAATTAAAATAGAAAAAATAATACAAACAATATGCATGATCTAGTTGTTCTCTCTCTATAATATATTTACTCCATTTCACAAAGAATGACATGATTTGACTTGACATGGAGTTTAAGAATATAAAAAAGATTTCTGAATTTTGTGGTCCTAAATTAAAGTAAGGTCAAATATATTAAAAAATTACACTTTAATCTTATGGCCTTAAACATGGCACGTGGAAAATTGAAATTAAAATATTATAAAAAAATCATTCTTTTTAAATAGATTAAAAAAAGAT</genome_strand>
        <mrna_strand>TAATCCCTCAGCGGCCTGTTAATTAAATAGTACAGTATGCAAATCGTCTTGTTGAATTAATTTTTAATTAATGTCCTGTTGATTAACTAGATTCTTAGGAAATCTCCCAAAACTTATTAAGATTTTTATTTTTTTTAATTTGTACTATAATGAAATGACTTGTATAGTTCATTTGTTAATTAGAGATTTCCTAATCATTAATCAATATTCTATTTACTCATTTGTTTCTTTAATTTGTCGCAGAGCAGCTATGTAAATTGTTAAGAAATATATTTATTTTTGGTAATCAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E398401" ref_strand="+" ref_description="SGN-E398401 [TUS-37-O15](-)">
      <seq>ccggcgctgcccaaaactcagccaagcctcctcacctatacggctcctttactaatccctcagcagcttgttaattaattagtacagtatgcaaatcgtcttgttgaatttatttttaattaatgtcttgttgattaactagattcttaggaaatctcccaaaacttattaagatttttattttttttaatttgtactataatgaaatgacttgtatagttcatttgttaattagagatttcctaatcattaatcaatattctatttactcatttgtttctttaattggtcgcagagcagctatgtaaattgttaagaaatatatttatttttggaatcaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="125622" stop="124681"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125322" g_stop="124989" g_length="334"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="334" r_length="334" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="340" polyA_stop="355"/>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-E398401" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>334</cumulative_length_of_scored_exons>
        <coverage percentage="0.941" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E398401" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125322" e_stop="124989"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGGCGCTGCCCAAAACTCAGCCAAGCCTCCTCACCTATACGGCTCCTTTACTAATCCCTCAGCAGCTTGTTAATTAATTAGTACAGTATGCAAATCGTCTTGTTGAATTTATTTTTAATTAATGTCTTGTTGATTAACTAGATTCTTAGGAAATCTCCCAAAACTTATTAAGATTTTTATTTTTTTTAATTTGTACTATAATGAAATGACTTGTATAGTTCATTTGTTAATTAGAGATTTCCTAATCATTAATCAATATTCTATTTACTCATTTGTTTCTTTAATTTGTCGCAGTGCAGCTATGTAAATTGTTAAGAAATATATTTATTTTTG</genome_strand>
        <mrna_strand>CCGGCGCTGCCCAAAACTCAGCCAAGCCTCCTCACCTATACGGCTCCTTTACTAATCCCTCAGCAGCTTGTTAATTAATTAGTACAGTATGCAAATCGTCTTGTTGAATTTATTTTTAATTAATGTCTTGTTGATTAACTAGATTCTTAGGAAATCTCCCAAAACTTATTAAGATTTTTATTTTTTTTAATTTGTACTATAATGAAATGACTTGTATAGTTCATTTGTTAATTAGAGATTTCCTAATCATTAATCAATATTCTATTTACTCATTTGTTTCTTTAATTGGTCGCAGAGCAGCTATGTAAATTGTTAAGAAATATATTTATTTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E247190" ref_strand="+" ref_description="SGN-E247190 [cLEF-46-A23]">
      <seq>cggcgctgcccaaaactcagccaagcctcctgacctatgcggctcctttactaatccctcagcagcttgttaattaattagtacagtatgcaaatcgtcttgttgaatttatttttaattaatgtcttgttgattaactagattcttaggaaatctcccaaaacttattaagatttttattttttttaatttgtactataatgaaatgacttgtatagttcatttgttaattagagatttcctaatcattaatcaatattctatttactcatttgtttctttaatttgtcgcagtgcagctatgtaaattgttaagaaata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="125621" stop="124701"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125321" g_stop="125001" g_length="321"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="321" r_length="321" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-E247190" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>321</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E247190" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125321" e_stop="125001"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGCGCTGCCCAAAACTCAGCCAAGCCTCCTCACCTATACGGCTCCTTTACTAATCCCTCAGCAGCTTGTTAATTAATTAGTACAGTATGCAAATCGTCTTGTTGAATTTATTTTTAATTAATGTCTTGTTGATTAACTAGATTCTTAGGAAATCTCCCAAAACTTATTAAGATTTTTATTTTTTTTAATTTGTACTATAATGAAATGACTTGTATAGTTCATTTGTTAATTAGAGATTTCCTAATCATTAATCAATATTCTATTTACTCATTTGTTTCTTTAATTTGTCGCAGTGCAGCTATGTAAATTGTTAAGAAATA</genome_strand>
        <mrna_strand>CGGCGCTGCCCAAAACTCAGCCAAGCCTCCTGACCTATGCGGCTCCTTTACTAATCCCTCAGCAGCTTGTTAATTAATTAGTACAGTATGCAAATCGTCTTGTTGAATTTATTTTTAATTAATGTCTTGTTGATTAACTAGATTCTTAGGAAATCTCCCAAAACTTATTAAGATTTTTATTTTTTTTAATTTGTACTATAATGAAATGACTTGTATAGTTCATTTGTTAATTAGAGATTTCCTAATCATTAATCAATATTCTATTTACTCATTTGTTTCTTTAATTTGTCGCAGTGCAGCTATGTAAATTGTTAAGAAATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>119</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="3538" PGL_stop="2798"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="3538" e_stop="2798"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.993">
            <gDNA_exon_boundary e_start="3538" e_stop="2798" e_length="741"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3538" stop="2799"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E372269" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3431" stop="3048"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392718" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3431" stop="3201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E393061" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3430" stop="2798"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E347313" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3430" stop="2799"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342071" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3221" stop="2798"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E393060" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3134" stop="2798"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392911" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGTTCTTACCAAATCAAATGGCACAGCTGTTGTATAGACAAAAATGGTGCTTACTGGAGCCTTATGCCCCTGAACACTAATCAGTTCTTCACTGTACAGGAATCTTTTAATAGTGGTCAGTCTGTTAGAGTGCCATAGATTGCAGTAATTTAGTTAGAGCTAGGATGATATTTCTATTATCAGAACAAACAATCTGAAGCTTATTGGTGAATTGCCTAGTGTAACATGGACCCAATCTGACTGTTAACAATAGTGCCAGATTTATAGCCATGTTTACACTATGGTTGATGCTGCAGGGTGGCTGTTAACTGCCACTGCTTGGTAGATGGTGGTGGATTAGACATGTGCTTGTGCCAGCAACGTGAAGAAAACAACGAACATATTTTGCTACATGTGTGTATATACTCAGGATTATGGAATAGAATCCTTCAATGGCTACAGGGACAACCTCCGGGATCACAAAGCTGGGAGCTTACACTTCCAATGGATATTAGGGAATACTATAGGGAATTTTAGAGCTGCACAAGCGTTTAAAATGATATATGCTAAATGTGTCAATTACATTGTTTGACGAAATTATATTTTATTAAAATGATGTCAAGAATCTTAAAACGAGAGCTAGATTAGAATTTTATTCATGCTCTCAAAAGAAGAAGAAAAAGGTTGAAAGTTGTTTTATATTTATTAAGTACTTTTGCTCAATATTGTTAATAATATATTTTTATTATATTATTATATACT</gDNA_template>
            <first_frame> G  S  Y  Q  I  K  W  H  S  C  C  I  D  K  N  G  A  Y  W  S  L  M  P  L  N  T  N  Q  F  F  T  V  Q  E  S  F  N  S  G  Q  S  V  R  V  P  *  I  A  V  I  *  L  E  L  G  *  Y  F  Y  Y  Q  N  K  Q  S  E  A  Y  W  *  I  A  *  C  N  M  D  P  I  *  L  L  T  I  V  P  D  L  *  P  C  L  H  Y  G  *  C  C  R  V  A  V  N  C  H  C  L  V  D  G  G  G  L  D  M  C  L  C  Q  Q  R  E  E  N  N  E  H  I  L  L  H  V  C  I  Y  S  G  L  W  N  R  I  L  Q  W  L  Q  G  Q  P  P  G  S  Q  S  W  E  L  T  L  P  M  D  I  R  E  Y  Y  R  E  F  *  S  C  T  S  V  *  N  D  I  C  *  M  C  Q  L  H  C  L  T  K  L  Y  F  I  K  M  M  S  R  I  L  K  R  E  L  D  *  N  F  I  H  A  L  K  R  R  R  K  R  L  K  V  V  L  Y  L  L  S  T  F  A  Q  Y  C  *  *  Y  I  F  I  I  L  L  Y  T </first_frame>
            <second_frame>  V  L  T  K  S  N  G  T  A  V  V  *  T  K  M  V  L  T  G  A  L  C  P  *  T  L  I  S  S  S  L  Y  R  N  L  L  I  V  V  S  L  L  E  C  H  R  L  Q  *  F  S  *  S  *  D  D  I  S  I  I  R  T  N  N  L  K  L  I  G  E  L  P  S  V  T  W  T  Q  S  D  C  *  Q  *  C  Q  I  Y  S  H  V  Y  T  M  V  D  A  A  G  W  L  L  T  A  T  A  W  *  M  V  V  D  *  T  C  A  C  A  S  N  V  K  K  T  T  N  I  F  C  Y  M  C  V  Y  T  Q  D  Y  G  I  E  S  F  N  G  Y  R  D  N  L  R  D  H  K  A  G  S  L  H  F  Q  W  I  L  G  N  T  I  G  N  F  R  A  A  Q  A  F  K  M  I  Y  A  K  C  V  N  Y  I  V  *  R  N  Y  I  L  L  K  *  C  Q  E  S  *  N  E  S  *  I  R  I  L  F  M  L  S  K  E  E  E  K  G  *  K  L  F  Y  I  Y  *  V  L  L  L  N  I  V  N  N  I  F  L  L  Y  Y  Y  I   </second_frame>
            <third_frame>   F  L  P  N  Q  M  A  Q  L  L  Y  R  Q  K  W  C  L  L  E  P  Y  A  P  E  H  *  S  V  L  H  C  T  G  I  F  *  *  W  S  V  C  *  S  A  I  D  C  S  N  L  V  R  A  R  M  I  F  L  L  S  E  Q  T  I  *  S  L  L  V  N  C  L  V  *  H  G  P  N  L  T  V  N  N  S  A  R  F  I  A  M  F  T  L  W  L  M  L  Q  G  G  C  *  L  P  L  L  G  R  W  W  W  I  R  H  V  L  V  P  A  T  *  R  K  Q  R  T  Y  F  A  T  C  V  Y  I  L  R  I  M  E  *  N  P  S  M  A  T  G  T  T  S  G  I  T  K  L  G  A  Y  T  S  N  G  Y  *  G  I  L  *  G  I  L  E  L  H  K  R  L  K  *  Y  M  L  N  V  S  I  T  L  F  D  E  I  I  F  Y  *  N  D  V  K  N  L  K  T  R  A  R  L  E  F  Y  S  C  S  Q  K  K  K  K  K  V  E  S  C  F  I  F  I  K  Y  F  C  S  I  L  L  I  I  Y  F  Y  Y  I  I  I  Y  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0284G15.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="3198" stop="2968"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>228</number_coding_nucleotides>
                  <number_encoded_amino_acids>76</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TCACASNVKKTTNIFCYMCVYTQDYGIESFNGYRDNLRDHKAGSLHFQWILGNTIGNFRAAQAFKMIYAKCVNYIV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0284G15.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="3250" stop="3023"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>225</number_coding_nucleotides>
                  <number_encoded_amino_acids>75</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CCRVAVNCHCLVDGGGLDMCLCQQREENNEHILLHVCIYSGLWNRILQWLQGQPPGSQSWELTLPMDIREYYREF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="5384" PGL_stop="4550"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="5384" e_stop="4550"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="5384" e_stop="4550" e_length="835"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="5384" stop="5037"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E208700" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="5266" stop="4550"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E372270" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="5266" stop="4748"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E287203" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AATTCTCATTATTGATCGTGTGAAGCAAATTTTGGTTAAAAAGGATTATTGGTTGTCTTATAAGCTGGCAAAATATGCGGCATGCAATGGTGCATGGTTAGTAGCTGCTTACATATTTGGGGAGCTAATACCTATGGTCCAATCTGATCTCTGTTGTTTTTGGTTAAAATCCTTATCCCATCTTTCAGAATTAGAAAGGAAATTTCAGTTGTTCGGGCTTACTCTTTCTGGAAATGCAGCTGGGGAAATTATGACAGCTGATCAGATTGAAAATGTTATTGGGGCCGCCAACAAGCTTTGTTCTTTAGAGGAATCTTTTGATGCCTCTGTTTCTGGTCTTGCTTTTAGTTTTCAGAGATGGTTTATTACTTTAAGATCAAAGGTTGTTCGAACTGTGGCAGATGTACTAAAATTATTGAGCATGAATTTGCTTTCACAAGATGCCACCAGTACAAAACAAATAGAGGCGAGGATTTTGGTTTGGCACTCAAATTCTTCTAAAGGACTCAGCTCATTGTTGCAACTGCTTGCCCATGCTTCTTCCCAGTTCATGATGCTAGTAAAGGAATTTGATCTCTTAGCAGCGTCATTCATTGTCATGGACAGGAAAAGTATGAAGATAGTTTCTGATCTTGGATTGAGTTGTTCACTGTTAGCTTTTAGTACTGGATTGACATTACGTTTGGCCAGTTTCCGTGGTAAACAAAATTGTAGTACTTATGGTCTTGAAACTACAGACGAGCAATTTCATGCTCAGCTAGTTCATGACTTGTTAAGAAGACTTGGGTTTACAGACATAGAGACTAGCAAAAATCTGCGGCATCTTTTGGATTTC</gDNA_template>
            <first_frame> N  S  H  Y  *  S  C  E  A  N  F  G  *  K  G  L  L  V  V  L  *  A  G  K  I  C  G  M  Q  W  C  M  V  S  S  C  L  H  I  W  G  A  N  T  Y  G  P  I  *  S  L  L  F  L  V  K  I  L  I  P  S  F  R  I  R  K  E  I  S  V  V  R  A  Y  S  F  W  K  C  S  W  G  N  Y  D  S  *  S  D  *  K  C  Y  W  G  R  Q  Q  A  L  F  F  R  G  I  F  *  C  L  C  F  W  S  C  F  *  F  S  E  M  V  Y  Y  F  K  I  K  G  C  S  N  C  G  R  C  T  K  I  I  E  H  E  F  A  F  T  R  C  H  Q  Y  K  T  N  R  G  E  D  F  G  L  A  L  K  F  F  *  R  T  Q  L  I  V  A  T  A  C  P  C  F  F  P  V  H  D  A  S  K  G  I  *  S  L  S  S  V  I  H  C  H  G  Q  E  K  Y  E  D  S  F  *  S  W  I  E  L  F  T  V  S  F  *  Y  W  I  D  I  T  F  G  Q  F  P  W  *  T  K  L  *  Y  L  W  S  *  N  Y  R  R  A  I  S  C  S  A  S  S  *  L  V  K  K  T  W  V  Y  R  H  R  D  *  Q  K  S  A  A  S  F  G  F  </first_frame>
            <second_frame>  I  L  I  I  D  R  V  K  Q  I  L  V  K  K  D  Y  W  L  S  Y  K  L  A  K  Y  A  A  C  N  G  A  W  L  V  A  A  Y  I  F  G  E  L  I  P  M  V  Q  S  D  L  C  C  F  W  L  K  S  L  S  H  L  S  E  L  E  R  K  F  Q  L  F  G  L  T  L  S  G  N  A  A  G  E  I  M  T  A  D  Q  I  E  N  V  I  G  A  A  N  K  L  C  S  L  E  E  S  F  D  A  S  V  S  G  L  A  F  S  F  Q  R  W  F  I  T  L  R  S  K  V  V  R  T  V  A  D  V  L  K  L  L  S  M  N  L  L  S  Q  D  A  T  S  T  K  Q  I  E  A  R  I  L  V  W  H  S  N  S  S  K  G  L  S  S  L  L  Q  L  L  A  H  A  S  S  Q  F  M  M  L  V  K  E  F  D  L  L  A  A  S  F  I  V  M  D  R  K  S  M  K  I  V  S  D  L  G  L  S  C  S  L  L  A  F  S  T  G  L  T  L  R  L  A  S  F  R  G  K  Q  N  C  S  T  Y  G  L  E  T  T  D  E  Q  F  H  A  Q  L  V  H  D  L  L  R  R  L  G  F  T  D  I  E  T  S  K  N  L  R  H  L  L  D  F </second_frame>
            <third_frame>   F  S  L  L  I  V  *  S  K  F  W  L  K  R  I  I  G  C  L  I  S  W  Q  N  M  R  H  A  M  V  H  G  *  *  L  L  T  Y  L  G  S  *  Y  L  W  S  N  L  I  S  V  V  F  G  *  N  P  Y  P  I  F  Q  N  *  K  G  N  F  S  C  S  G  L  L  F  L  E  M  Q  L  G  K  L  *  Q  L  I  R  L  K  M  L  L  G  P  P  T  S  F  V  L  *  R  N  L  L  M  P  L  F  L  V  L  L  L  V  F  R  D  G  L  L  L  *  D  Q  R  L  F  E  L  W  Q  M  Y  *  N  Y  *  A  *  I  C  F  H  K  M  P  P  V  Q  N  K  *  R  R  G  F  W  F  G  T  Q  I  L  L  K  D  S  A  H  C  C  N  C  L  P  M  L  L  P  S  S  *  C  *  *  R  N  L  I  S  *  Q  R  H  S  L  S  W  T  G  K  V  *  R  *  F  L  I  L  D  *  V  V  H  C  *  L  L  V  L  D  *  H  Y  V  W  P  V  S  V  V  N  K  I  V  V  L  M  V  L  K  L  Q  T  S  N  F  M  L  S  *  F  M  T  C  *  E  D  L  G  L  Q  T  *  R  L  A  K  I  C  G  I  F  W  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0284G15.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="5383" stop="4550"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>834</number_coding_nucleotides>
                  <number_encoded_amino_acids>278</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ILIIDRVKQILVKKDYWLSYKLAKYAACNGAWLVAAYIFGELIPMVQSDLCCFWLKSLSHLSELERKFQLFGLTLSGNAAGEIMTADQIENVIGAANKLCSLEESFDASVSGLAFSFQRWFITLRSKVVRTVADVLKLLSMNLLSQDATSTKQIEARILVWHSNSSKGLSSLLQLLAHASSQFMMLVKEFDLLAASFIVMDRKSMKIVSDLGLSCSLLAFSTGLTLRLASFRGKQNCSTYGLETTDEQFHAQLVHDLLRRLGFTDIETSKNLRHLLDF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="9578" PGL_stop="8965"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="9578" e_stop="8965"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="9578" e_stop="8965" e_length="614"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9578" stop="8965"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E329408" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATCTACAGGCAAAGGCTTCTTTGTTTGCAGCCGGATGCTTTTCTGAACTGGCAGATGATTTTGCTTATGTATTTCTGGAGATGCTTGGAGGTCTGTTGGTCTCATCTGAAACATCAAGGGCTATAAGGTTAGCTGGAGGACGTGCTTTTGCTAAAATGTGGTGCCCAATTTTACTAGCAGATATAGCTCATAAGGTTCAGTATTTCTCTTTAATATGAGTTTCTGCCACCAAATACATGTAAATTTTCTTATTGCACCTGTGACTCATTCCATGGACCCCCTATCCTTCTGTCCCTTTCCGCTCTATTCTAAAAGAACTTGTTTTTTGAAAAAGCACTGTTCAGAAACCATGTAAATACTCATATAGATGACAAAATTATGCATAGTGAAATGCAATGTTTTTCTTTTTCATGCATGACATGCAAGTGATCATCTCTGAACTAATTGTGACTATTGCTCTAGTTTTTGTTACAAGTTCCTCAAAATAAGTTTTTAATGATACCAGGCCGATCTGTATTGTCTGACAATTTGCTTAAATGATGAAGAAGTGAGTTCAGATTTCTATTGCAGCACTAAAATTGACTTTTTCATATTGCAGACTGGTGTGAAGCTTA</gDNA_template>
            <first_frame> I  Y  R  Q  R  L  L  C  L  Q  P  D  A  F  L  N  W  Q  M  I  L  L  M  Y  F  W  R  C  L  E  V  C  W  S  H  L  K  H  Q  G  L  *  G  *  L  E  D  V  L  L  L  K  C  G  A  Q  F  Y  *  Q  I  *  L  I  R  F  S  I  S  L  *  Y  E  F  L  P  P  N  T  C  K  F  S  Y  C  T  C  D  S  F  H  G  P  P  I  L  L  S  L  S  A  L  F  *  K  N  L  F  F  E  K  A  L  F  R  N  H  V  N  T  H  I  D  D  K  I  M  H  S  E  M  Q  C  F  S  F  S  C  M  T  C  K  *  S  S  L  N  *  L  *  L  L  L  *  F  L  L  Q  V  P  Q  N  K  F  L  M  I  P  G  R  S  V  L  S  D  N  L  L  K  *  *  R  S  E  F  R  F  L  L  Q  H  *  N  *  L  F  H  I  A  D  W  C  E  A   </first_frame>
            <second_frame>  S  T  G  K  G  F  F  V  C  S  R  M  L  F  *  T  G  R  *  F  C  L  C  I  S  G  D  A  W  R  S  V  G  L  I  *  N  I  K  G  Y  K  V  S  W  R  T  C  F  C  *  N  V  V  P  N  F  T  S  R  Y  S  S  *  G  S  V  F  L  F  N  M  S  F  C  H  Q  I  H  V  N  F  L  I  A  P  V  T  H  S  M  D  P  L  S  F  C  P  F  P  L  Y  S  K  R  T  C  F  L  K  K  H  C  S  E  T  M  *  I  L  I  *  M  T  K  L  C  I  V  K  C  N  V  F  L  F  H  A  *  H  A  S  D  H  L  *  T  N  C  D  Y  C  S  S  F  C  Y  K  F  L  K  I  S  F  *  *  Y  Q  A  D  L  Y  C  L  T  I  C  L  N  D  E  E  V  S  S  D  F  Y  C  S  T  K  I  D  F  F  I  L  Q  T  G  V  K  L  </second_frame>
            <third_frame>   L  Q  A  K  A  S  L  F  A  A  G  C  F  S  E  L  A  D  D  F  A  Y  V  F  L  E  M  L  G  G  L  L  V  S  S  E  T  S  R  A  I  R  L  A  G  G  R  A  F  A  K  M  W  C  P  I  L  L  A  D  I  A  H  K  V  Q  Y  F  S  L  I  *  V  S  A  T  K  Y  M  *  I  F  L  L  H  L  *  L  I  P  W  T  P  Y  P  S  V  P  F  R  S  I  L  K  E  L  V  F  *  K  S  T  V  Q  K  P  C  K  Y  S  Y  R  *  Q  N  Y  A  *  *  N  A  M  F  F  F  F  M  H  D  M  Q  V  I  I  S  E  L  I  V  T  I  A  L  V  F  V  T  S  S  S  K  *  V  F  N  D  T  R  P  I  C  I  V  *  Q  F  A  *  M  M  K  K  *  V  Q  I  S  I  A  A  L  K  L  T  F  S  Y  C  R  L  V  *  S  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0284G15.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="9576" stop="9361"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>213</number_coding_nucleotides>
                  <number_encoded_amino_acids>71</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LQAKASLFAAGCFSELADDFAYVFLEMLGGLLVSSETSRAIRLAGGRAFAKMWCPILLADIAHKVQYFSLI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="15142" PGL_stop="14402"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="15142" e_stop="14402"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.993">
            <gDNA_exon_boundary e_start="15142" e_stop="14402" e_length="741"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15142" stop="14403"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E372269" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15035" stop="14652"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392718" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15035" stop="14805"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E393061" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15034" stop="14402"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E347313" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15034" stop="14403"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342071" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14825" stop="14402"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E393060" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14738" stop="14402"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392911" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGTTCTTACCAAATCAAATGGCACAGCTGTTGTATAGACAAAAATGGTGCTTACTGGAGCCTTATGCCCCTGAACACTAATCAGTTCTTCACTGTACAGGAATCTTTTAATAGTGGTCAGTCTGTTAGAGTGCCATAGATTGCAGTAATTTAGTTAGAGCTAGGATGATATTTCTATTATCAGAACAAACAATCTGAAGCTTATTGGTGAATTGCCTAGTGTAACATGGACCCAATCTGACTGTTAACAATAGTGCCAGATTTATAGCCATGTTTACACTATGGTTGATGCTGCAGGGTGGCTGTTAACTGCCACTGCTTGGTAGATGGTGGTGGATTAGACATGTGCTTGTGCCAGCAACGTGAAGAAAACAACGAACATATTTTGCTACATGTGTGTATATACTCAGGATTATGGAATAGAATCCTTCAATGGCTACAGGGACAACCTCCGGGATCACAAAGCTGGGAGCTTACACTTCCAATGGATATTAGGGAATACTATAGGGAATTTTAGAGCTGCACAAGCGTTTAAAATGATATATGCTAAATGTGTCAATTACATTGTTTGACGAAATTATATTTTATTAAAATGATGTCAAGAATCTTAAAACGAGAGCTAGATTAGAATTTTATTCATGCTCTCAAAAGAAGAAGAAAAAGGTTGAAAGTTGTTTTATATTTATTAAGTACTTTTGCTCAATATTGTTAATAATATATTTTTATTATATTATTATATACT</gDNA_template>
            <first_frame> G  S  Y  Q  I  K  W  H  S  C  C  I  D  K  N  G  A  Y  W  S  L  M  P  L  N  T  N  Q  F  F  T  V  Q  E  S  F  N  S  G  Q  S  V  R  V  P  *  I  A  V  I  *  L  E  L  G  *  Y  F  Y  Y  Q  N  K  Q  S  E  A  Y  W  *  I  A  *  C  N  M  D  P  I  *  L  L  T  I  V  P  D  L  *  P  C  L  H  Y  G  *  C  C  R  V  A  V  N  C  H  C  L  V  D  G  G  G  L  D  M  C  L  C  Q  Q  R  E  E  N  N  E  H  I  L  L  H  V  C  I  Y  S  G  L  W  N  R  I  L  Q  W  L  Q  G  Q  P  P  G  S  Q  S  W  E  L  T  L  P  M  D  I  R  E  Y  Y  R  E  F  *  S  C  T  S  V  *  N  D  I  C  *  M  C  Q  L  H  C  L  T  K  L  Y  F  I  K  M  M  S  R  I  L  K  R  E  L  D  *  N  F  I  H  A  L  K  R  R  R  K  R  L  K  V  V  L  Y  L  L  S  T  F  A  Q  Y  C  *  *  Y  I  F  I  I  L  L  Y  T </first_frame>
            <second_frame>  V  L  T  K  S  N  G  T  A  V  V  *  T  K  M  V  L  T  G  A  L  C  P  *  T  L  I  S  S  S  L  Y  R  N  L  L  I  V  V  S  L  L  E  C  H  R  L  Q  *  F  S  *  S  *  D  D  I  S  I  I  R  T  N  N  L  K  L  I  G  E  L  P  S  V  T  W  T  Q  S  D  C  *  Q  *  C  Q  I  Y  S  H  V  Y  T  M  V  D  A  A  G  W  L  L  T  A  T  A  W  *  M  V  V  D  *  T  C  A  C  A  S  N  V  K  K  T  T  N  I  F  C  Y  M  C  V  Y  T  Q  D  Y  G  I  E  S  F  N  G  Y  R  D  N  L  R  D  H  K  A  G  S  L  H  F  Q  W  I  L  G  N  T  I  G  N  F  R  A  A  Q  A  F  K  M  I  Y  A  K  C  V  N  Y  I  V  *  R  N  Y  I  L  L  K  *  C  Q  E  S  *  N  E  S  *  I  R  I  L  F  M  L  S  K  E  E  E  K  G  *  K  L  F  Y  I  Y  *  V  L  L  L  N  I  V  N  N  I  F  L  L  Y  Y  Y  I   </second_frame>
            <third_frame>   F  L  P  N  Q  M  A  Q  L  L  Y  R  Q  K  W  C  L  L  E  P  Y  A  P  E  H  *  S  V  L  H  C  T  G  I  F  *  *  W  S  V  C  *  S  A  I  D  C  S  N  L  V  R  A  R  M  I  F  L  L  S  E  Q  T  I  *  S  L  L  V  N  C  L  V  *  H  G  P  N  L  T  V  N  N  S  A  R  F  I  A  M  F  T  L  W  L  M  L  Q  G  G  C  *  L  P  L  L  G  R  W  W  W  I  R  H  V  L  V  P  A  T  *  R  K  Q  R  T  Y  F  A  T  C  V  Y  I  L  R  I  M  E  *  N  P  S  M  A  T  G  T  T  S  G  I  T  K  L  G  A  Y  T  S  N  G  Y  *  G  I  L  *  G  I  L  E  L  H  K  R  L  K  *  Y  M  L  N  V  S  I  T  L  F  D  E  I  I  F  Y  *  N  D  V  K  N  L  K  T  R  A  R  L  E  F  Y  S  C  S  Q  K  K  K  K  K  V  E  S  C  F  I  F  I  K  Y  F  C  S  I  L  L  I  I  Y  F  Y  Y  I  I  I  Y  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0284G15.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="14802" stop="14572"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>228</number_coding_nucleotides>
                  <number_encoded_amino_acids>76</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TCACASNVKKTTNIFCYMCVYTQDYGIESFNGYRDNLRDHKAGSLHFQWILGNTIGNFRAAQAFKMIYAKCVNYIV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0284G15.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="14854" stop="14627"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>225</number_coding_nucleotides>
                  <number_encoded_amino_acids>75</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CCRVAVNCHCLVDGGGLDMCLCQQREENNEHILLHVCIYSGLWNRILQWLQGQPPGSQSWELTLPMDIREYYREF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="16988" PGL_stop="16154"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="16988" e_stop="16154"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="16988" e_stop="16154" e_length="835"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16988" stop="16641"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E208700" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16870" stop="16154"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E372270" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16870" stop="16352"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E287203" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AATTCTCATTATTGATCGTGTGAAGCAAATTTTGGTTAAAAAGGATTATTGGTTGTCTTATAAGCTGGCAAAATATGCGGCATGCAATGGTGCATGGTTAGTAGCTGCTTACATATTTGGGGAGCTAATACCTATGGTCCAATCTGATCTCTGTTGTTTTTGGTTAAAATCCTTATCCCATCTTTCAGAATTAGAAAGGAAATTTCAGTTGTTCGGGCTTACTCTTTCTGGAAATGCAGCTGGGGAAATTATGACAGCTGATCAGATTGAAAATGTTATTGGGGCCGCCAACAAGCTTTGTTCTTTAGAGGAATCTTTTGATGCCTCTGTTTCTGGTCTTGCTTTTAGTTTTCAGAGATGGTTTATTACTTTAAGATCAAAGGTTGTTCGAACTGTGGCAGATGTACTAAAATTATTGAGCATGAATTTGCTTTCACAAGATGCCACCAGTACAAAACAAATAGAGGCGAGGATTTTGGTTTGGCACTCAAATTCTTCTAAAGGACTCAGCTCATTGTTGCAACTGCTTGCCCATGCTTCTTCCCAGTTCATGATGCTAGTAAAGGAATTTGATCTCTTAGCAGCGTCATTCATTGTCATGGACAGGAAAAGTATGAAGATAGTTTCTGATCTTGGATTGAGTTGTTCACTGTTAGCTTTTAGTACTGGATTGACATTACGTTTGGCCAGTTTCCGTGGTAAACAAAATTGTAGTACTTATGGTCTTGAAACTACAGACGAGCAATTTCATGCTCAGCTAGTTCATGACTTGTTAAGAAGACTTGGGTTTACAGACATAGAGACTAGCAAAAATCTGCGGCATCTTTTGGATTTC</gDNA_template>
            <first_frame> N  S  H  Y  *  S  C  E  A  N  F  G  *  K  G  L  L  V  V  L  *  A  G  K  I  C  G  M  Q  W  C  M  V  S  S  C  L  H  I  W  G  A  N  T  Y  G  P  I  *  S  L  L  F  L  V  K  I  L  I  P  S  F  R  I  R  K  E  I  S  V  V  R  A  Y  S  F  W  K  C  S  W  G  N  Y  D  S  *  S  D  *  K  C  Y  W  G  R  Q  Q  A  L  F  F  R  G  I  F  *  C  L  C  F  W  S  C  F  *  F  S  E  M  V  Y  Y  F  K  I  K  G  C  S  N  C  G  R  C  T  K  I  I  E  H  E  F  A  F  T  R  C  H  Q  Y  K  T  N  R  G  E  D  F  G  L  A  L  K  F  F  *  R  T  Q  L  I  V  A  T  A  C  P  C  F  F  P  V  H  D  A  S  K  G  I  *  S  L  S  S  V  I  H  C  H  G  Q  E  K  Y  E  D  S  F  *  S  W  I  E  L  F  T  V  S  F  *  Y  W  I  D  I  T  F  G  Q  F  P  W  *  T  K  L  *  Y  L  W  S  *  N  Y  R  R  A  I  S  C  S  A  S  S  *  L  V  K  K  T  W  V  Y  R  H  R  D  *  Q  K  S  A  A  S  F  G  F  </first_frame>
            <second_frame>  I  L  I  I  D  R  V  K  Q  I  L  V  K  K  D  Y  W  L  S  Y  K  L  A  K  Y  A  A  C  N  G  A  W  L  V  A  A  Y  I  F  G  E  L  I  P  M  V  Q  S  D  L  C  C  F  W  L  K  S  L  S  H  L  S  E  L  E  R  K  F  Q  L  F  G  L  T  L  S  G  N  A  A  G  E  I  M  T  A  D  Q  I  E  N  V  I  G  A  A  N  K  L  C  S  L  E  E  S  F  D  A  S  V  S  G  L  A  F  S  F  Q  R  W  F  I  T  L  R  S  K  V  V  R  T  V  A  D  V  L  K  L  L  S  M  N  L  L  S  Q  D  A  T  S  T  K  Q  I  E  A  R  I  L  V  W  H  S  N  S  S  K  G  L  S  S  L  L  Q  L  L  A  H  A  S  S  Q  F  M  M  L  V  K  E  F  D  L  L  A  A  S  F  I  V  M  D  R  K  S  M  K  I  V  S  D  L  G  L  S  C  S  L  L  A  F  S  T  G  L  T  L  R  L  A  S  F  R  G  K  Q  N  C  S  T  Y  G  L  E  T  T  D  E  Q  F  H  A  Q  L  V  H  D  L  L  R  R  L  G  F  T  D  I  E  T  S  K  N  L  R  H  L  L  D  F </second_frame>
            <third_frame>   F  S  L  L  I  V  *  S  K  F  W  L  K  R  I  I  G  C  L  I  S  W  Q  N  M  R  H  A  M  V  H  G  *  *  L  L  T  Y  L  G  S  *  Y  L  W  S  N  L  I  S  V  V  F  G  *  N  P  Y  P  I  F  Q  N  *  K  G  N  F  S  C  S  G  L  L  F  L  E  M  Q  L  G  K  L  *  Q  L  I  R  L  K  M  L  L  G  P  P  T  S  F  V  L  *  R  N  L  L  M  P  L  F  L  V  L  L  L  V  F  R  D  G  L  L  L  *  D  Q  R  L  F  E  L  W  Q  M  Y  *  N  Y  *  A  *  I  C  F  H  K  M  P  P  V  Q  N  K  *  R  R  G  F  W  F  G  T  Q  I  L  L  K  D  S  A  H  C  C  N  C  L  P  M  L  L  P  S  S  *  C  *  *  R  N  L  I  S  *  Q  R  H  S  L  S  W  T  G  K  V  *  R  *  F  L  I  L  D  *  V  V  H  C  *  L  L  V  L  D  *  H  Y  V  W  P  V  S  V  V  N  K  I  V  V  L  M  V  L  K  L  Q  T  S  N  F  M  L  S  *  F  M  T  C  *  E  D  L  G  L  Q  T  *  R  L  A  K  I  C  G  I  F  W  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0284G15.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="16987" stop="16154"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>834</number_coding_nucleotides>
                  <number_encoded_amino_acids>278</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ILIIDRVKQILVKKDYWLSYKLAKYAACNGAWLVAAYIFGELIPMVQSDLCCFWLKSLSHLSELERKFQLFGLTLSGNAAGEIMTADQIENVIGAANKLCSLEESFDASVSGLAFSFQRWFITLRSKVVRTVADVLKLLSMNLLSQDATSTKQIEARILVWHSNSSKGLSSLLQLLAHASSQFMMLVKEFDLLAASFIVMDRKSMKIVSDLGLSCSLLAFSTGLTLRLASFRGKQNCSTYGLETTDEQFHAQLVHDLLRRLGFTDIETSKNLRHLLDF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="21182" PGL_stop="20569"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="21182" e_stop="20569"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="21182" e_stop="20569" e_length="614"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21182" stop="20569"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E329408" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATCTACAGGCAAAGGCTTCTTTGTTTGCAGCCGGATGCTTTTCTGAACTGGCAGATGATTTTGCTTATGTATTTCTGGAGATGCTTGGAGGTCTGTTGGTCTCATCTGAAACATCAAGGGCTATAAGGTTAGCTGGAGGACGTGCTTTTGCTAAAATGTGGTGCCCAATTTTACTAGCAGATATAGCTCATAAGGTTCAGTATTTCTCTTTAATATGAGTTTCTGCCACCAAATACATGTAAATTTTCTTATTGCACCTGTGACTCATTCCATGGACCCCCTATCCTTCTGTCCCTTTCCGCTCTATTCTAAAAGAACTTGTTTTTTGAAAAAGCACTGTTCAGAAACCATGTAAATACTCATATAGATGACAAAATTATGCATAGTGAAATGCAATGTTTTTCTTTTTCATGCATGACATGCAAGTGATCATCTCTGAACTAATTGTGACTATTGCTCTAGTTTTTGTTACAAGTTCCTCAAAATAAGTTTTTAATGATACCAGGCCGATCTGTATTGTCTGACAATTTGCTTAAATGATGAAGAAGTGAGTTCAGATTTCTATTGCAGCACTAAAATTGACTTTTTCATATTGCAGACTGGTGTGAAGCTTA</gDNA_template>
            <first_frame> I  Y  R  Q  R  L  L  C  L  Q  P  D  A  F  L  N  W  Q  M  I  L  L  M  Y  F  W  R  C  L  E  V  C  W  S  H  L  K  H  Q  G  L  *  G  *  L  E  D  V  L  L  L  K  C  G  A  Q  F  Y  *  Q  I  *  L  I  R  F  S  I  S  L  *  Y  E  F  L  P  P  N  T  C  K  F  S  Y  C  T  C  D  S  F  H  G  P  P  I  L  L  S  L  S  A  L  F  *  K  N  L  F  F  E  K  A  L  F  R  N  H  V  N  T  H  I  D  D  K  I  M  H  S  E  M  Q  C  F  S  F  S  C  M  T  C  K  *  S  S  L  N  *  L  *  L  L  L  *  F  L  L  Q  V  P  Q  N  K  F  L  M  I  P  G  R  S  V  L  S  D  N  L  L  K  *  *  R  S  E  F  R  F  L  L  Q  H  *  N  *  L  F  H  I  A  D  W  C  E  A   </first_frame>
            <second_frame>  S  T  G  K  G  F  F  V  C  S  R  M  L  F  *  T  G  R  *  F  C  L  C  I  S  G  D  A  W  R  S  V  G  L  I  *  N  I  K  G  Y  K  V  S  W  R  T  C  F  C  *  N  V  V  P  N  F  T  S  R  Y  S  S  *  G  S  V  F  L  F  N  M  S  F  C  H  Q  I  H  V  N  F  L  I  A  P  V  T  H  S  M  D  P  L  S  F  C  P  F  P  L  Y  S  K  R  T  C  F  L  K  K  H  C  S  E  T  M  *  I  L  I  *  M  T  K  L  C  I  V  K  C  N  V  F  L  F  H  A  *  H  A  S  D  H  L  *  T  N  C  D  Y  C  S  S  F  C  Y  K  F  L  K  I  S  F  *  *  Y  Q  A  D  L  Y  C  L  T  I  C  L  N  D  E  E  V  S  S  D  F  Y  C  S  T  K  I  D  F  F  I  L  Q  T  G  V  K  L  </second_frame>
            <third_frame>   L  Q  A  K  A  S  L  F  A  A  G  C  F  S  E  L  A  D  D  F  A  Y  V  F  L  E  M  L  G  G  L  L  V  S  S  E  T  S  R  A  I  R  L  A  G  G  R  A  F  A  K  M  W  C  P  I  L  L  A  D  I  A  H  K  V  Q  Y  F  S  L  I  *  V  S  A  T  K  Y  M  *  I  F  L  L  H  L  *  L  I  P  W  T  P  Y  P  S  V  P  F  R  S  I  L  K  E  L  V  F  *  K  S  T  V  Q  K  P  C  K  Y  S  Y  R  *  Q  N  Y  A  *  *  N  A  M  F  F  F  F  M  H  D  M  Q  V  I  I  S  E  L  I  V  T  I  A  L  V  F  V  T  S  S  S  K  *  V  F  N  D  T  R  P  I  C  I  V  *  Q  F  A  *  M  M  K  K  *  V  Q  I  S  I  A  A  L  K  L  T  F  S  Y  C  R  L  V  *  S  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0284G15.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="21180" stop="20965"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>213</number_coding_nucleotides>
                  <number_encoded_amino_acids>71</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LQAKASLFAAGCFSELADDFAYVFLEMLGGLLVSSETSRAIRLAGGRAFAKMWCPILLADIAHKVQYFSLI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="-" PGL_start="34314" PGL_stop="25583"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="34314" e_stop="34229"/>
            <exon e_start="31707" e_stop="31491"/>
            <exon e_start="29941" e_stop="29784"/>
            <exon e_start="29676" e_stop="29531"/>
            <exon e_start="27486" e_stop="27424"/>
            <exon e_start="27323" e_stop="27227"/>
            <exon e_start="26910" e_stop="26749"/>
            <exon e_start="26625" e_stop="26519"/>
            <exon e_start="26344" e_stop="26223"/>
            <exon e_start="26147" e_stop="25583"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.981" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.757" acc_prob="0.964" e_score="0.968"/>
          <exon-intron don_prob="0.816" acc_prob="0.859" e_score="1.000"/>
          <exon-intron don_prob="0.908" acc_prob="0.005" e_score="0.994"/>
          <exon-intron don_prob="0.953" acc_prob="0.505" e_score="1.000"/>
          <exon-intron don_prob="0.617" acc_prob="0.759" e_score="0.992"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="34314" e_stop="34229" e_length="86"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.981">
            <gDNA_intron_boundary i_start="34228" i_stop="31708" i_length="2521"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="31707" e_stop="31491" e_length="217"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="31490" i_stop="29942" i_length="1549"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="29941" e_stop="29784" e_length="158"/>
          </exon>
          <intron i_serial="3" don_prob="0.996" acc_prob="0.000">
            <gDNA_intron_boundary i_start="29783" i_stop="29677" i_length="107"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="29676" e_stop="29531" e_length="146"/>
          </exon>
          <intron i_serial="4" don_prob="0.994" acc_prob="0.996">
            <gDNA_intron_boundary i_start="29530" i_stop="27487" i_length="2044"/>
          </intron>
          <exon e_serial="5" e_score="0.968">
            <gDNA_exon_boundary e_start="27486" e_stop="27424" e_length="63"/>
          </exon>
          <intron i_serial="5" don_prob="0.757" acc_prob="0.964">
            <gDNA_intron_boundary i_start="27423" i_stop="27324" i_length="100"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="27323" e_stop="27227" e_length="97"/>
          </exon>
          <intron i_serial="6" don_prob="0.816" acc_prob="0.859">
            <gDNA_intron_boundary i_start="27226" i_stop="26911" i_length="316"/>
          </intron>
          <exon e_serial="7" e_score="0.994">
            <gDNA_exon_boundary e_start="26910" e_stop="26749" e_length="162"/>
          </exon>
          <intron i_serial="7" don_prob="0.908" acc_prob="0.005">
            <gDNA_intron_boundary i_start="26748" i_stop="26626" i_length="123"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="26625" e_stop="26519" e_length="107"/>
          </exon>
          <intron i_serial="8" don_prob="0.953" acc_prob="0.505">
            <gDNA_intron_boundary i_start="26518" i_stop="26345" i_length="174"/>
          </intron>
          <exon e_serial="9" e_score="0.992">
            <gDNA_exon_boundary e_start="26344" e_stop="26223" e_length="122"/>
          </exon>
          <intron i_serial="9" don_prob="0.617" acc_prob="0.759">
            <gDNA_intron_boundary i_start="26222" i_stop="26148" i_length="75"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="26147" e_stop="25583" e_length="565"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34314" stop="34229"/>
              <exon start="31707" stop="31491"/>
              <exon start="29941" stop="29784"/>
              <exon start="29676" stop="29531"/>
              <exon start="27486" stop="27424"/>
              <exon start="27323" stop="27294"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E315661" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27323" stop="27227"/>
              <exon start="26910" stop="26749"/>
              <exon start="26625" stop="26524"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E709229" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26848" stop="26749"/>
              <exon start="26625" stop="26519"/>
              <exon start="26344" stop="26223"/>
              <exon start="26147" stop="26020"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E276124" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26584" stop="26519"/>
              <exon start="26344" stop="26223"/>
              <exon start="26147" stop="25797"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349807" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26059" stop="25583"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357661" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AATTCCTTCGCGTGGAGTATTTGCTCTTCTTCTATGGCTCCTCGTCGCATTAACCTCCATAGTCCGCGCTGATGAACTTTCTTTAG : TTGTATCTCAATCTACCACGCTGCAGATATCTCCAGGAATAGTAGTGGAAAATTCTCCTGGCTCTAAGCCAGGAACGAAAGTTATTTGTGAGAGAGTTCAGATCCATGGATTGTCAAGGCTAAAAAGTCTAAGAAAGTATGCCCATTCAGTAAAGGTGAATGTGTCATATCTGAATCCAAGTGGGCGTCCACCTAATGCTGAGGTCTGTTTCCATAG : GAATCAATCCGTGGCAATTGGGATGTGTCCGCCAGGCCAATGGATGAAAATAACCAAGGGTTCATGGGTGCGATCAATGTCACCTTTCGAGCACAGGTTTTTGGATATTAGGATGACAGGCTCATCTAAGGACACTTTTCAGGTCTCGCTGCACGAAG : ATTTTTATTTGTATCGTGTTGTGTTTCTGGTATTGGGTATATTGCTACTTGCTCTGGCATCCTTCCTTAGCAAGTCTCTAGTATTTTTCTATGGTGGTGCGATGGCAGTAGGGGTTATTCTTGTGATACTGATGGTCCTTTTCCAG : GGAATGAAGCTTCTTCCGACTGGTAGGAAGAGTTCACTAGCAATATTCTTGTATTCATCCATT : GTTGGTGTAGGATCTTTCATTCTAAGCTATGTGCCCCAATTGTTGCGTTCAATACTGCGCGAGATTGGTGTTGGTGAAGACATGTACAACCCTGTAT : CTGGCAATATTTCTGCTGCTTTTCCTTGTGATTGCTGGAGCTTGGTTGGGGTTTTGGGTTGTTCACAAACTCGTACTTGAAGAAGATGGATCAATTGACACCGGAGTATCTCAATTTGTTGCTTGGTCCATTCGATTTCTCGCTTCTGCGTTGATTCTTCAG : AGTTCTGTGGATCCTTTATTGTGTGCCGAGGCATGGATATGTGGAGTTCTGATCTCATCAATCTTGAGGAGACTATGCCGTCCCAAATATGTTCTGCGCTTTTTCAA : GAATTTGTCACAAATAGACACGAGTTATCTCTGGGAATCTCAGGAATTGTACGCATCACCGACAAAAGGGTCATATGATTCCAGGACGTTCAAGACAAATCTAAATGGCACAATCCGCCCAG : GTTTTCCTCTCAAGCCACGAAGTTTGTTGTCAGAAAAAGATACTTACTATTCTACTTTCCATAAAACTCCTGAACAGAAGAAGCTTTCAAAGGATGAGTATGACAAGATAACTAAAGACACCACAAAGAAGGCTATGGAAGAGCTTGTTTCTTCCCCGGATTTTAGCAAATGGGCTGTTGCTCACGCAGATAGGATTACTCTTGCTCCAAAGAAAGAGACAACTGCTAGGCAGAGAAGGTGGTACCAATGGCTATGACTTGAAAATGTGATTATAGTGGCGGAGAACTTAGGTGTCCAGACTTGTTGTAATGTGTTCCGCGTTTTTCACGTAGGTAGTGATCTTTTTTTTTTTTAAGTATGTCTTATGCTGTAGTTCTCCACATAAAAAAAGGTTTGTATTATGGTGTGATTACATTCTTATTACTCTGAGCTAGTGTAACATTATTGACTTTTACAAGGCACTGAAACTGACTGCTTCAAGGACTGTGCTTTAATGTTTAATGAATGTAACAACTGGATAGTGGAGATAACATTTTGCCACTGTAAATGTCTTGATGCTTTGAT</gDNA_template>
            <first_frame> N  S  F  A  W  S  I  C  S  S  S  M  A  P  R  R  I  N  L  H  S  P  R  *  *  T  F  F  S :   C  I  S  I  Y  H  A  A  D  I  S  R  N  S  S  G  K  F  S  W  L  *  A  R  N  E  S  Y  L  *  E  S  S  D  P  W  I  V  K  A  K  K  S  K  K  V  C  P  F  S  K  G  E  C  V  I  S  E  S  K  W  A  S  T  *  C  *  G  L  F  P  *  :  E  S  I  R  G  N  W  D  V  S  A  R  P  M  D  E  N  N  Q  G  F  M  G  A  I  N  V  T  F  R  A  Q  V  F  G  Y  *  D  D  R  L  I  *  G  H  F  S  G  L  A  A  R  R :   F  L  F  V  S  C  C  V  S  G  I  G  Y  I  A  T  C  S  G  I  L  P  *  Q  V  S  S  I  F  L  W  W  C  D  G  S  R  G  Y  S  C  D  T  D  G  P  F  P   : G  N  E  A  S  S  D  W  *  E  E  F  T  S  N  I  L  V  F  I  H   : C  W  C  R  I  F  H  S  K  L  C  A  P  I  V  A  F  N  T  A  R  D  W  C  W  *  R  H  V  Q  P  C  I :   W  Q  Y  F  C  C  F  S  L  *  L  L  E  L  G  W  G  F  G  L  F  T  N  S  Y  L  K  K  M  D  Q  L  T  P  E  Y  L  N  L  L  L  G  P  F  D  F  S  L  L  R  *  F  F  R :   V  L  W  I  L  Y  C  V  P  R  H  G  Y  V  E  F  *  S  H  Q  S  *  G  D  Y  A  V  P  N  M  F  C  A  F  S   : R  I  C  H  K  *  T  R  V  I  S  G  N  L  R  N  C  T  H  H  R  Q  K  G  H  M  I  P  G  R  S  R  Q  I  *  M  A  Q  S  A  Q  :  V  F  L  S  S  H  E  V  C  C  Q  K  K  I  L  T  I  L  L  S  I  K  L  L  N  R  R  S  F  Q  R  M  S  M  T  R  *  L  K  T  P  Q  R  R  L  W  K  S  L  F  L  P  R  I  L  A  N  G  L  L  L  T  Q  I  G  L  L  L  L  Q  R  K  R  Q  L  L  G  R  E  G  G  T  N  G  Y  D  L  K  M  *  L  *  W  R  R  T  *  V  S  R  L  V  V  M  C  S  A  F  F  T  *  V  V  I  F  F  F  F  K  Y  V  L  C  C  S  S  P  H  K  K  R  F  V  L  W  C  D  Y  I  L  I  T  L  S  *  C  N  I  I  D  F  Y  K  A  L  K  L  T  A  S  R  T  V  L  *  C  L  M  N  V  T  T  G  *  W  R  *  H  F  A  T  V  N  V  L  M  L  *  </first_frame>
            <second_frame>  I  P  S  R  G  V  F  A  L  L  L  W  L  L  V  A  L  T  S  I  V  R  A  D  E  L  S  L   : V  V  S  Q  S  T  T  L  Q  I  S  P  G  I  V  V  E  N  S  P  G  S  K  P  G  T  K  V  I  C  E  R  V  Q  I  H  G  L  S  R  L  K  S  L  R  K  Y  A  H  S  V  K  V  N  V  S  Y  L  N  P  S  G  R  P  P  N  A  E  V  C  F  H  R :   N  Q  S  V  A  I  G  M  C  P  P  G  Q  W  M  K  I  T  K  G  S  W  V  R  S  M  S  P  F  E  H  R  F  L  D  I  R  M  T  G  S  S  K  D  T  F  Q  V  S  L  H  E   : D  F  Y  L  Y  R  V  V  F  L  V  L  G  I  L  L  L  A  L  A  S  F  L  S  K  S  L  V  F  F  Y  G  G  A  M  A  V  G  V  I  L  V  I  L  M  V  L  F  Q  :  G  M  K  L  L  P  T  G  R  K  S  S  L  A  I  F  L  Y  S  S  I  :  V  G  V  G  S  F  I  L  S  Y  V  P  Q  L  L  R  S  I  L  R  E  I  G  V  G  E  D  M  Y  N  P  V   : S  G  N  I  S  A  A  F  P  C  D  C  W  S  L  V  G  V  L  G  C  S  Q  T  R  T  *  R  R  W  I  N  *  H  R  S  I  S  I  C  C  L  V  H  S  I  S  R  F  C  V  D  S  S   : E  F  C  G  S  F  I  V  C  R  G  M  D  M  W  S  S  D  L  I  N  L  E  E  T  M  P  S  Q  I  C  S  A  L  F  Q  :  E  F  V  T  N  R  H  E  L  S  L  G  I  S  G  I  V  R  I  T  D  K  R  V  I  *  F  Q  D  V  Q  D  K  S  K  W  H  N  P  P  R :   F  S  S  Q  A  T  K  F  V  V  R  K  R  Y  L  L  F  Y  F  P  *  N  S  *  T  E  E  A  F  K  G  *  V  *  Q  D  N  *  R  H  H  K  E  G  Y  G  R  A  C  F  F  P  G  F  *  Q  M  G  C  C  S  R  R  *  D  Y  S  C  S  K  E  R  D  N  C  *  A  E  K  V  V  P  M  A  M  T  *  K  C  D  Y  S  G  G  E  L  R  C  P  D  L  L  *  C  V  P  R  F  S  R  R  *  *  S  F  F  F  L  S  M  S  Y  A  V  V  L  H  I  K  K  G  L  Y  Y  G  V  I  T  F  L  L  L  *  A  S  V  T  L  L  T  F  T  R  H  *  N  *  L  L  Q  G  L  C  F  N  V  *  *  M  *  Q  L  D  S  G  D  N  I  L  P  L  *  M  S  *  C  F  D </second_frame>
            <third_frame>   F  L  R  V  E  Y  L  L  F  F  Y  G  S  S  S  H  *  P  P  *  S  A  L  M  N  F  L  *  :  L  Y  L  N  L  P  R  C  R  Y  L  Q  E  *  *  W  K  I  L  L  A  L  S  Q  E  R  K  L  F  V  R  E  F  R  S  M  D  C  Q  G  *  K  V  *  E  S  M  P  I  Q  *  R  *  M  C  H  I  *  I  Q  V  G  V  H  L  M  L  R  S  V  S  I   : G  I  N  P  W  Q  L  G  C  V  R  Q  A  N  G  *  K  *  P  R  V  H  G  C  D  Q  C  H  L  S  S  T  G  F  W  I  L  G  *  Q  A  H  L  R  T  L  F  R  S  R  C  T  K  :  I  F  I  C  I  V  L  C  F  W  Y  W  V  Y  C  Y  L  L  W  H  P  S  L  A  S  L  *  Y  F  S  M  V  V  R  W  Q  *  G  L  F  L  *  Y  *  W  S  F  S  R :   E  *  S  F  F  R  L  V  G  R  V  H  *  Q  Y  S  C  I  H  P  L :   L  V  *  D  L  S  F  *  A  M  C  P  N  C  C  V  Q  Y  C  A  R  L  V  L  V  K  T  C  T  T  L  Y  :  L  A  I  F  L  L  L  F  L  V  I  A  G  A  W  L  G  F  W  V  V  H  K  L  V  L  E  E  D  G  S  I  D  T  G  V  S  Q  F  V  A  W  S  I  R  F  L  A  S  A  L  I  L  Q  :  S  S  V  D  P  L  L  C  A  E  A  W  I  C  G  V  L  I  S  S  I  L  R  R  L  C  R  P  K  Y  V  L  R  F  F  K :   N  L  S  Q  I  D  T  S  Y  L  W  E  S  Q  E  L  Y  A  S  P  T  K  G  S  Y  D  S  R  T  F  K  T  N  L  N  G  T  I  R  P   : G  F  P  L  K  P  R  S  L  L  S  E  K  D  T  Y  Y  S  T  F  H  K  T  P  E  Q  K  K  L  S  K  D  E  Y  D  K  I  T  K  D  T  T  K  K  A  M  E  E  L  V  S  S  P  D  F  S  K  W  A  V  A  H  A  D  R  I  T  L  A  P  K  K  E  T  T  A  R  Q  R  R  W  Y  Q  W  L  *  L  E  N  V  I  I  V  A  E  N  L  G  V  Q  T  C  C  N  V  F  R  V  F  H  V  G  S  D  L  F  F  F  *  V  C  L  M  L  *  F  S  T  *  K  K  V  C  I  M  V  *  L  H  S  Y  Y  S  E  L  V  *  H  Y  *  L  L  Q  G  T  E  T  D  C  F  K  D  C  A  L  M  F  N  E  C  N  N  W  I  V  E  I  T  F  C  H  C  K  C  L  D  A  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0284G15.1" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="34313" stop="34229"/>
                    <exon start="31707" stop="31491"/>
                    <exon start="29941" stop="29784"/>
                    <exon start="29676" stop="29531"/>
                    <exon start="27486" stop="27424"/>
                    <exon start="27323" stop="27227"/>
                    <exon start="26910" stop="26831"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>843</number_coding_nucleotides>
                  <number_encoded_amino_acids>281</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IPSRGVFALLLWLLVALTSIVRADELSLVVSQSTTLQISPGIVVENSPGSKPGTKVICERVQIHGLSRLKSLRKYAHSVKVNVSYLNPSGRPPNAEVCFHRNQSVAIGMCPPGQWMKITKGSWVRSMSPFEHRFLDIRMTGSSKDTFQVSLHEDFYLYRVVFLVLGILLLALASFLSKSLVFFYGGAMAVGVILVILMVLFQGMKLLPTGRKSSLAIFLYSSIVGVGSFILSYVPQLLRSILREIGVGEDMYNPVSGNISAAFPCDCWSLVGVLGCSQTRT*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0284G15.1" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="26812" stop="26749"/>
                    <exon start="26625" stop="26519"/>
                    <exon start="26344" stop="26267"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>246</number_coding_nucleotides>
                  <number_encoded_amino_acids>82</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HRSISICCLVHSISRFCVDSSEFCGSFIVCRGMDMWSSDLINLEETMPSQICSALFQEFVTNRHELSLGISGIVRITDKRVI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="46388" PGL_stop="53338"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="46388" e_stop="46725"/>
            <exon e_start="48580" e_stop="48626"/>
            <exon e_start="48731" e_stop="48845"/>
            <exon e_start="51387" e_stop="51431"/>
            <exon e_start="51526" e_stop="51585"/>
            <exon e_start="51676" e_stop="51771"/>
            <exon e_start="52916" e_stop="53338"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.917" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.934" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.937" e_score="1.000"/>
          <exon-intron don_prob="0.571" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.984" e_score="1.000"/>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="46388" e_stop="46725" e_length="338"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.917">
            <gDNA_intron_boundary i_start="46726" i_stop="48579" i_length="1854"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="48580" e_stop="48626" e_length="47"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.992">
            <gDNA_intron_boundary i_start="48627" i_stop="48730" i_length="104"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="48731" e_stop="48845" e_length="115"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.934">
            <gDNA_intron_boundary i_start="48846" i_stop="51386" i_length="2541"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="51387" e_stop="51431" e_length="45"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="0.937">
            <gDNA_intron_boundary i_start="51432" i_stop="51525" i_length="94"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="51526" e_stop="51585" e_length="60"/>
          </exon>
          <intron i_serial="5" don_prob="0.571" acc_prob="0.996">
            <gDNA_intron_boundary i_start="51586" i_stop="51675" i_length="90"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="51676" e_stop="51771" e_length="96"/>
          </exon>
          <intron i_serial="6" don_prob="0.991" acc_prob="0.984">
            <gDNA_intron_boundary i_start="51772" i_stop="52915" i_length="1144"/>
          </intron>
          <exon e_serial="7" e_score="0.995">
            <gDNA_exon_boundary e_start="52916" e_stop="53338" e_length="423"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46388" stop="46725"/>
              <exon start="48580" stop="48626"/>
              <exon start="48731" stop="48845"/>
              <exon start="51387" stop="51431"/>
              <exon start="51526" stop="51585"/>
              <exon start="51676" stop="51771"/>
              <exon start="52916" stop="53072"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E731732" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46396" stop="46725"/>
              <exon start="48580" stop="48626"/>
              <exon start="48731" stop="48779"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E247964" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46398" stop="46725"/>
              <exon start="48580" stop="48626"/>
              <exon start="48731" stop="48845"/>
              <exon start="51387" stop="51431"/>
              <exon start="51526" stop="51530"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E250095" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46398" stop="46725"/>
              <exon start="48580" stop="48626"/>
              <exon start="48731" stop="48845"/>
              <exon start="51387" stop="51418"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E250249" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46431" stop="46725"/>
              <exon start="48580" stop="48626"/>
              <exon start="48731" stop="48845"/>
              <exon start="51387" stop="51431"/>
              <exon start="51526" stop="51585"/>
              <exon start="51676" stop="51771"/>
              <exon start="52916" stop="53101"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E729654" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46432" stop="46725"/>
              <exon start="48580" stop="48626"/>
              <exon start="48731" stop="48845"/>
              <exon start="51387" stop="51431"/>
              <exon start="51526" stop="51585"/>
              <exon start="51676" stop="51771"/>
              <exon start="52916" stop="52957"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342951" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46436" stop="46725"/>
              <exon start="48580" stop="48626"/>
              <exon start="48731" stop="48845"/>
              <exon start="51387" stop="51431"/>
              <exon start="51526" stop="51585"/>
              <exon start="51676" stop="51771"/>
              <exon start="52916" stop="53138"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E731918" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46438" stop="46725"/>
              <exon start="48580" stop="48626"/>
              <exon start="48731" stop="48845"/>
              <exon start="51387" stop="51431"/>
              <exon start="51526" stop="51585"/>
              <exon start="51676" stop="51771"/>
              <exon start="52916" stop="53094"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E730526" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46526" stop="46725"/>
              <exon start="48580" stop="48626"/>
              <exon start="48731" stop="48845"/>
              <exon start="51387" stop="51431"/>
              <exon start="51526" stop="51585"/>
              <exon start="51676" stop="51771"/>
              <exon start="52916" stop="53338"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E730389" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51693" stop="51771"/>
              <exon start="52916" stop="53283"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E694929" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTTGCCAATTTTTTCTTCCACAAATTTTCATTTCAACCCACTTGCAATCTGCAACCATGGAATCTCTCCAGCAGAGTAGCCTAACATTTGCTACAAAATTTCCTTCTTTTTGTTCCTTCTCTCCCACTCCCAACACCTTCAAGTTTCTTCACCCTTTCCCTTCCTCTGCTATTCCTCTCACCGCCACTACACCAAAACGAATTTCTAGTTTTGTGCCTAAAGCTGCTGCTTCCACCGCTGCCTTTGCTCAAGACATTGGTGATGTACTAGCAGATGTTTCAATTTTCACTGCTACTGGTCAGTCCGTCAAGTTTGAGGACCTTTGGGATCAAAATGAG : GGAGTAGCTGTTGTTGCACTTCTGAGGCATTTTGGCTGTCCTTGCTG : CTGGGAACTTGCTAAAGCACTCAAAGAGACAAAGGAGAGATTTGATTCTGCTGGTGTAAAGCTAATTGCAGTTGGTATTGGTGCTCCTAACAAAGCACGTATTCTTGCTGAAAGG : TTACCATTTCCATTGGATTGCTTGTATGCTGATCCAGACCGCAAG : GCATACGATGTTCTAGGCCTGTATTATGGTGTTGGCCGCACATTTTTCAACCCAGCTAGT : GCTAAAGTGCTCTCTAGATTCAATGAACTGCGGGAAGCTACGAAGAACTACACCATTGAAGCAACCCCTGATGACAGAAGTGGTGTCTTGCAGCAG : GGAGGGATGTTTCTGTTTAAAGGGAAGCAGTTGTTGTATGCATGGAAGGATGAAGGGACCGGTGACCATGCTCCTATGGAAGATATCTTTGATATTTGCTGCAAAGTTCCTGTTGCATAAATGCCTTCAATCTGTGTTTCATCTCTATTCGAATTTCCAAGGGAAGTGGATGCATATATTGGTTTAGTTCTCTAATTGTATATGTTGTATGTAATTCTGAAACTTGTAACTAAGGGCTCATTTGGTACGAGATTAAGGGATAATTTTTAATTTTAGGATGGGTTGGTATAAAATCGTGAAATAACTTTGTTCCATCACCTCTAGTATATGAGGATGGGAGGTAAATAGTCCATATCAGAATTTGAAATTGTATGAAATTATATTATCTAGTACTGGAAAATCACAAAGGTTATGTTTTGGTAA</gDNA_template>
            <first_frame> V  A  N  F  F  F  H  K  F  S  F  Q  P  T  C  N  L  Q  P  W  N  L  S  S  R  V  A  *  H  L  L  Q  N  F  L  L  F  V  P  S  L  P  L  P  T  P  S  S  F  F  T  L  S  L  P  L  L  F  L  S  P  P  L  H  Q  N  E  F  L  V  L  C  L  K  L  L  L  P  P  L  P  L  L  K  T  L  V  M  Y  *  Q  M  F  Q  F  S  L  L  L  V  S  P  S  S  L  R  T  F  G  I  K  M  R :   E  *  L  L  L  H  F  *  G  I  L  A  V  L  A   : A  G  N  L  L  K  H  S  K  R  Q  R  R  D  L  I  L  L  V  *  S  *  L  Q  L  V  L  V  L  L  T  K  H  V  F  L  L  K  G :   Y  H  F  H  W  I  A  C  M  L  I  Q  T  A  R :   H  T  M  F  *  A  C  I  M  V  L  A  A  H  F  S  T  Q  L  V :   L  K  C  S  L  D  S  M  N  C  G  K  L  R  R  T  T  P  L  K  Q  P  L  M  T  E  V  V  S  C  S  R :   E  G  C  F  C  L  K  G  S  S  C  C  M  H  G  R  M  K  G  P  V  T  M  L  L  W  K  I  S  L  I  F  A  A  K  F  L  L  H  K  C  L  Q  S  V  F  H  L  Y  S  N  F  Q  G  K  W  M  H  I  L  V  *  F  S  N  C  I  C  C  M  *  F  *  N  L  *  L  R  A  H  L  V  R  D  *  G  I  I  F  N  F  R  M  G  W  Y  K  I  V  K  *  L  C  S  I  T  S  S  I  *  G  W  E  V  N  S  P  Y  Q  N  L  K  L  Y  E  I  I  L  S  S  T  G  K  S  Q  R  L  C  F  G   </first_frame>
            <second_frame>  L  P  I  F  S  S  T  N  F  H  F  N  P  L  A  I  C  N  H  G  I  S  P  A  E  *  P  N  I  C  Y  K  I  S  F  F  L  F  L  L  S  H  S  Q  H  L  Q  V  S  S  P  F  P  F  L  C  Y  S  S  H  R  H  Y  T  K  T  N  F  *  F  C  A  *  S  C  C  F  H  R  C  L  C  S  R  H  W  *  C  T  S  R  C  F  N  F  H  C  Y  W  S  V  R  Q  V  *  G  P  L  G  S  K  *   : G  S  S  C  C  C  T  S  E  A  F  W  L  S  L  L  :  L  G  T  C  *  S  T  Q  R  D  K  G  E  I  *  F  C  W  C  K  A  N  C  S  W  Y  W  C  S  *  Q  S  T  Y  S  C  *  K   : V  T  I  S  I  G  L  L  V  C  *  S  R  P  Q   : G  I  R  C  S  R  P  V  L  W  C  W  P  H  I  F  Q  P  S  *   : C  *  S  A  L  *  I  Q  *  T  A  G  S  Y  E  E  L  H  H  *  S  N  P  *  *  Q  K  W  C  L  A  A   : G  R  D  V  S  V  *  R  E  A  V  V  V  C  M  E  G  *  R  D  R  *  P  C  S  Y  G  R  Y  L  *  Y  L  L  Q  S  S  C  C  I  N  A  F  N  L  C  F  I  S  I  R  I  S  K  G  S  G  C  I  Y  W  F  S  S  L  I  V  Y  V  V  C  N  S  E  T  C  N  *  G  L  I  W  Y  E  I  K  G  *  F  L  I  L  G  W  V  G  I  K  S  *  N  N  F  V  P  S  P  L  V  Y  E  D  G  R  *  I  V  H  I  R  I  *  N  C  M  K  L  Y  Y  L  V  L  E  N  H  K  G  Y  V  L  V  </second_frame>
            <third_frame>   C  Q  F  F  L  P  Q  I  F  I  S  T  H  L  Q  S  A  T  M  E  S  L  Q  Q  S  S  L  T  F  A  T  K  F  P  S  F  C  S  F  S  P  T  P  N  T  F  K  F  L  H  P  F  P  S  S  A  I  P  L  T  A  T  T  P  K  R  I  S  S  F  V  P  K  A  A  A  S  T  A  A  F  A  Q  D  I  G  D  V  L  A  D  V  S  I  F  T  A  T  G  Q  S  V  K  F  E  D  L  W  D  Q  N  E  :  G  V  A  V  V  A  L  L  R  H  F  G  C  P  C  C :   W  E  L  A  K  A  L  K  E  T  K  E  R  F  D  S  A  G  V  K  L  I  A  V  G  I  G  A  P  N  K  A  R  I  L  A  E  R  :  L  P  F  P  L  D  C  L  Y  A  D  P  D  R  K  :  A  Y  D  V  L  G  L  Y  Y  G  V  G  R  T  F  F  N  P  A  S  :  A  K  V  L  S  R  F  N  E  L  R  E  A  T  K  N  Y  T  I  E  A  T  P  D  D  R  S  G  V  L  Q  Q  :  G  G  M  F  L  F  K  G  K  Q  L  L  Y  A  W  K  D  E  G  T  G  D  H  A  P  M  E  D  I  F  D  I  C  C  K  V  P  V  A  *  M  P  S  I  C  V  S  S  L  F  E  F  P  R  E  V  D  A  Y  I  G  L  V  L  *  L  Y  M  L  Y  V  I  L  K  L  V  T  K  G  S  F  G  T  R  L  R  D  N  F  *  F  *  D  G  L  V  *  N  R  E  I  T  L  F  H  H  L  *  Y  M  R  M  G  G  K  *  S  I  S  E  F  E  I  V  *  N  Y  I  I  *  Y  W  K  I  T  K  V  M  F  W  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0284G15.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="46390" stop="46725"/>
                    <exon start="48580" stop="48626"/>
                    <exon start="48731" stop="48845"/>
                    <exon start="51387" stop="51431"/>
                    <exon start="51526" stop="51585"/>
                    <exon start="51676" stop="51771"/>
                    <exon start="52916" stop="53035"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>816</number_coding_nucleotides>
                  <number_encoded_amino_acids>272</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CQFFLPQIFISTHLQSATMESLQQSSLTFATKFPSFCSFSPTPNTFKFLHPFPSSAIPLTATTPKRISSFVPKAAASTAAFAQDIGDVLADVSIFTATGQSVKFEDLWDQNEGVAVVALLRHFGCPCCWELAKALKETKERFDSAGVKLIAVGIGAPNKARILAERLPFPLDCLYADPDRKAYDVLGLYYGVGRTFFNPASAKVLSRFNELREATKNYTIEATPDDRSGVLQQGGMFLFKGKQLLYAWKDEGTGDHAPMEDIFDICCKVPVA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="68997" PGL_stop="68207"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="68997" e_stop="68207"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.919"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.919">
            <gDNA_exon_boundary e_start="68997" e_stop="68207" e_length="791"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68997" stop="68278"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356614" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68994" stop="68331"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352401" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68639" stop="68207"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352180" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACGAATCCGCTCTTGTGGACTGAAACAAAGTTGGGTGGCATACCTTGATAGTGCACGAAACTTAGCCTCATATGCATTGACCGACATCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCCTATCCCTCAAAGTCCGGGGGATATACTTCTCCATAAACAAACTAGAGAATGAGGCCCAAGTCATAGGTGGTGCCTCTATTGGTTGACACTCAACATGTGACCGCCACCACATTTTGGCGTTCCCTTGAAACTGATAACTCACGAACTCAACACCAAACCGTTCTACTATACCCATCTTGTGTAGTAGCTCATGACAGTCAACCAGAAAATCGTAAGCATCCTCAGACTCAGCACCCTTGAAGACTGAAGGTTTCAATTTCAAGAACTTACTGAAAATTTCATGCTGATCATTTGTCATTACAGGCCCTGTAGTCAGACGAGGAAATGTGCCTATTTCCAATGAGGCATCCATGCGGGGAGCCATAGTGGCTGCATGTTGTACCTCTGAAACCGGAGGTGTTGGTGCAGAAAACACTGGAGGTGCCTGACCTTGATCAGACAACCCACTAAGATAAGCGAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCAATCCCTCATTCTGCACTTGTTCATTTTCCCCATCCTCCCCTTCTCTTATTACTTCTTCAGTCGGTGGAGGAGTCACCGCCCCAGTATCAGATGGGCTAGGTGCTCGTCCTCTTCCTCTAGAGAACGTCCTCCCACGACCTCTACCACGGCCTCTTGCCGCTGCTCTTC</gDNA_template>
            <first_frame> T  N  P  L  L  W  T  E  T  K  L  G  G  I  P  *  *  C  T  K  L  S  L  I  C  I  D  R  H  P  T  L  L  *  A  Q  E  L  I  P  F  P  I  P  Q  S  P  G  D  I  L  L  H  K  Q  T  R  E  *  G  P  S  H  R  W  C  L  Y  W  L  T  L  N  M  *  P  P  P  H  F  G  V  P  L  K  L  I  T  H  E  L  N  T  K  P  F  Y  Y  T  H  L  V  *  *  L  M  T  V  N  Q  K  I  V  S  I  L  R  L  S  T  L  E  D  *  R  F  Q  F  Q  E  L  T  E  N  F  M  L  I  I  C  H  Y  R  P  C  S  Q  T  R  K  C  A  Y  F  Q  *  G  I  H  A  G  S  H  S  G  C  M  L  Y  L  *  N  R  R  C  W  C  R  K  H  W  R  C  L  T  L  I  R  Q  P  T  K  I  S  E  N  L  I  D  H  L  W  G  R  L  G  W  Q  S  L  I  L  H  L  F  I  F  P  I  L  P  F  S  Y  Y  F  F  S  R  W  R  S  H  R  P  S  I  R  W  A  R  C  S  S  S  S  S  R  E  R  P  P  T  T  S  T  T  A  S  C  R  C  S   </first_frame>
            <second_frame>  R  I  R  S  C  G  L  K  Q  S  W  V  A  Y  L  D  S  A  R  N  L  A  S  Y  A  L  T  D  I  L  P  C  S  R  L  K  N  S  S  L  F  L  S  L  K  V  R  G  I  Y  F  S  I  N  K  L  E  N  E  A  Q  V  I  G  G  A  S  I  G  *  H  S  T  C  D  R  H  H  I  L  A  F  P  *  N  *  *  L  T  N  S  T  P  N  R  S  T  I  P  I  L  C  S  S  S  *  Q  S  T  R  K  S  *  A  S  S  D  S  A  P  L  K  T  E  G  F  N  F  K  N  L  L  K  I  S  C  *  S  F  V  I  T  G  P  V  V  R  R  G  N  V  P  I  S  N  E  A  S  M  R  G  A  I  V  A  A  C  C  T  S  E  T  G  G  V  G  A  E  N  T  G  G  A  *  P  *  S  D  N  P  L  R  *  A  R  T  *  L  I  I  S  G  V  G  W  G  G  N  P  S  F  C  T  C  S  F  S  P  S  S  P  S  L  I  T  S  S  V  G  G  G  V  T  A  P  V  S  D  G  L  G  A  R  P  L  P  L  E  N  V  L  P  R  P  L  P  R  P  L  A  A  A  L  </second_frame>
            <third_frame>   E  S  A  L  V  D  *  N  K  V  G  W  H  T  L  I  V  H  E  T  *  P  H  M  H  *  P  T  S  Y  L  A  L  G  S  R  T  H  P  F  S  Y  P  S  K  S  G  G  Y  T  S  P  *  T  N  *  R  M  R  P  K  S  *  V  V  P  L  L  V  D  T  Q  H  V  T  A  T  T  F  W  R  S  L  E  T  D  N  S  R  T  Q  H  Q  T  V  L  L  Y  P  S  C  V  V  A  H  D  S  Q  P  E  N  R  K  H  P  Q  T  Q  H  P  *  R  L  K  V  S  I  S  R  T  Y  *  K  F  H  A  D  H  L  S  L  Q  A  L  *  S  D  E  E  M  C  L  F  P  M  R  H  P  C  G  E  P  *  W  L  H  V  V  P  L  K  P  E  V  L  V  Q  K  T  L  E  V  P  D  L  D  Q  T  T  H  *  D  K  R  E  P  D  *  S  S  L  G  *  V  G  V  A  I  P  H  S  A  L  V  H  F  P  H  P  P  L  L  L  L  L  L  Q  S  V  E  E  S  P  P  Q  Y  Q  M  G  *  V  L  V  L  F  L  *  R  T  S  S  H  D  L  Y  H  G  L  L  P  L  L  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0284G15.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="68484" stop="68209"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>276</number_coding_nucleotides>
                  <number_encoded_amino_acids>92</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NRRCWCRKHWRCLTLIRQPTKISENLIDHLWGRLGWQSLILHLFIFPILPFSYYFFSRWRSHRPSIRWARCSSSSSRERPPTTSTTASCRCS</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0284G15.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="68996" stop="68787"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>207</number_coding_nucleotides>
                  <number_encoded_amino_acids>69</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RIRSCGLKQSWVAYLDSARNLASYALTDILPCSRLKNSSLFLSLKVRGIYFSINKLENEAQVIGGASIG*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0284G15.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="68405" stop="68208"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LIISGVGWGGNPSFCTCSFSPSSPSLITSSVGGGVTAPVSDGLGARPLPLENVLPRPLPRPLAAAL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="68274" PGL_stop="68827"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="68274" e_stop="68827"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.912"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.912">
            <gDNA_exon_boundary e_start="68274" e_stop="68827" e_length="554"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68274" stop="68827"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E329287" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACCTAGCCCATCTGATACTGGGGCGGTGACTCCTCCACCGACTGAAGAAGTAATAAGAGAAGGGGAGGATGGGGAAAATGAACAAGTGCAGAATGAGGGATTGCCACCCCAACCTACCCCAGAGATGATCAATCAGGTTCTCGCTTATCTTAGTGGGTTGTCTGATCAAGGTCAGGCACCTCCAGTGTTTTCTGCACCAACACCTCCGGTTTCAGAGGTACAACATGCAGCCACTATGGCTCCCCGCATGGATGCCTCATTGGAAATAGGCACATTTCCTCGTCTGACTACAGGGCCTGTAATGACAAATGATCAGCATGAAATTTTCAGTAAGTTCTTGAAATTGAAACCTTCAGTCTTCAAGGGTGCTGAGTCTGAGGATGCTTACGATTTTCTGGTTGACTGTCATGAGCTACTACACAAGATGGGTATAGTAGAACGGTTTGGTGTTGAGTTCGTGAGTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATGTTGAGTGTCAACCAATAGAGGCACCACCTATGACTTGGGCCTCATTCT</gDNA_template>
            <first_frame> T  *  P  I  *  Y  W  G  G  D  S  S  T  D  *  R  S  N  K  R  R  G  G  W  G  K  *  T  S  A  E  *  G  I  A  T  P  T  Y  P  R  D  D  Q  S  G  S  R  L  S  *  W  V  V  *  S  R  S  G  T  S  S  V  F  C  T  N  T  S  G  F  R  G  T  T  C  S  H  Y  G  S  P  H  G  C  L  I  G  N  R  H  I  S  S  S  D  Y  R  A  C  N  D  K  *  S  A  *  N  F  Q  *  V  L  E  I  E  T  F  S  L  Q  G  C  *  V  *  G  C  L  R  F  S  G  *  L  S  *  A  T  T  Q  D  G  Y  S  R  T  V  W  C  *  V  R  E  L  S  V  S  R  E  R  Q  N  V  V  A  V  T  C  *  V  S  T  N  R  G  T  T  Y  D  L  G  L  I   </first_frame>
            <second_frame>  P  S  P  S  D  T  G  A  V  T  P  P  P  T  E  E  V  I  R  E  G  E  D  G  E  N  E  Q  V  Q  N  E  G  L  P  P  Q  P  T  P  E  M  I  N  Q  V  L  A  Y  L  S  G  L  S  D  Q  G  Q  A  P  P  V  F  S  A  P  T  P  P  V  S  E  V  Q  H  A  A  T  M  A  P  R  M  D  A  S  L  E  I  G  T  F  P  R  L  T  T  G  P  V  M  T  N  D  Q  H  E  I  F  S  K  F  L  K  L  K  P  S  V  F  K  G  A  E  S  E  D  A  Y  D  F  L  V  D  C  H  E  L  L  H  K  M  G  I  V  E  R  F  G  V  E  F  V  S  Y  Q  F  Q  G  N  A  K  M  W  W  R  S  H  V  E  C  Q  P  I  E  A  P  P  M  T  W  A  S  F  </second_frame>
            <third_frame>   L  A  H  L  I  L  G  R  *  L  L  H  R  L  K  K  *  *  E  K  G  R  M  G  K  M  N  K  C  R  M  R  D  C  H  P  N  L  P  Q  R  *  S  I  R  F  S  L  I  L  V  G  C  L  I  K  V  R  H  L  Q  C  F  L  H  Q  H  L  R  F  Q  R  Y  N  M  Q  P  L  W  L  P  A  W  M  P  H  W  K  *  A  H  F  L  V  *  L  Q  G  L  *  *  Q  M  I  S  M  K  F  S  V  S  S  *  N  *  N  L  Q  S  S  R  V  L  S  L  R  M  L  T  I  F  W  L  T  V  M  S  Y  Y  T  R  W  V  *  *  N  G  L  V  L  S  S  *  V  I  S  F  K  G  T  P  K  C  G  G  G  H  M  L  S  V  N  Q  *  R  H  H  L  *  L  G  P  H  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0284G15.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="68275" stop="68826"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>552</number_coding_nucleotides>
                  <number_encoded_amino_acids>184</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PSPSDTGAVTPPPTEEVIREGEDGENEQVQNEGLPPQPTPEMINQVLAYLSGLSDQGQAPPVFSAPTPPVSEVQHAATMAPRMDASLEIGTFPRLTTGPVMTNDQHEIFSKFLKLKPSVFKGAESEDAYDFLVDCHELLHKMGIVERFGVEFVSYQFQGNAKMWWRSHVECQPIEAPPMTWASF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="68901" PGL_stop="70346"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="68901" e_stop="69073"/>
            <exon e_start="69819" e_stop="70346"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.931"/>
          <exon-only e_score="0.926"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.931">
            <gDNA_exon_boundary e_start="68901" e_stop="69073" e_length="173"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="69074" i_stop="69818" i_length="745"/>
          </intron>
          <exon e_serial="2" e_score="0.926">
            <gDNA_exon_boundary e_start="69819" e_stop="70346" e_length="528"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68901" stop="69073"/>
              <exon start="69819" stop="70346"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353359" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCAAGGTAGGATGTCGGTCAATGCATATGAGGCTAAGTTTCGTGCACTATCAAGGTATGCCACCCAACTTTGTTTCAGTCCACAAGAGCGGATTCGTCGTTTTGTGAGGGGGTTGAGGTCAGAGTTGCGGATTTCAGCCTTACAGGTAGCGGCTACAGCGAAATCTTTTCAAG : AAATGGTTGACTTCGATGTAATTCTGGGCATGACTTGGCTTTCTCCAAATTTTGCGATCTTGGATTGTAATGCTAAAACTGTGACGTTAGCCAAGCCTGGGACAGATCCGTTAGTGTGGGAGGGTGACTACACTTCCAATCCGGTTCGTATCATCTCCTTTCTTCGTTCTAAGAAAATGGTTAGTAAAGGGTGTTTAGCTTTCTTGGCACATCTCAAGGATGACACTACCCAAGTACCTTCGATTGAGTCGGTTTCGGTGGTCCGTGAGTTTCTGGATGTGTTCCCTGCAGATCTTCCTGGTATGCCACCAGATAGGGATATTGACTTCTGTATTGACCTTAAACCGGGTACTCGCCCCATTTCTATACCCCCTTATAGAATGGCTCCTGCGGAGTTAAGAGAGTTAAAAGCCCAACTTCAAGAGTTGTTGAACAAAGGCTTCATTAGACCAAGTGCATCTCCTTGGGGTGCTCCGATTTTGTTTGTGAAGAAGAAGGATGGGAGTTTTCGAATGTGCATAGACTACA</gDNA_template>
            <first_frame> A  R  *  D  V  G  Q  C  I  *  G  *  V  S  C  T  I  K  V  C  H  P  T  L  F  Q  S  T  R  A  D  S  S  F  C  E  G  V  E  V  R  V  A  D  F  S  L  T  G  S  G  Y  S  E  I  F  S  R :   N  G  *  L  R  C  N  S  G  H  D  L  A  F  S  K  F  C  D  L  G  L  *  C  *  N  C  D  V  S  Q  A  W  D  R  S  V  S  V  G  G  *  L  H  F  Q  S  G  S  Y  H  L  L  S  S  F  *  E  N  G  *  *  R  V  F  S  F  L  G  T  S  Q  G  *  H  Y  P  S  T  F  D  *  V  G  F  G  G  P  *  V  S  G  C  V  P  C  R  S  S  W  Y  A  T  R  *  G  Y  *  L  L  Y  *  P  *  T  G  Y  S  P  H  F  Y  T  P  L  *  N  G  S  C  G  V  K  R  V  K  S  P  T  S  R  V  V  E  Q  R  L  H  *  T  K  C  I  S  L  G  C  S  D  F  V  C  E  E  E  G  W  E  F  S  N  V  H  R  L   </first_frame>
            <second_frame>  Q  G  R  M  S  V  N  A  Y  E  A  K  F  R  A  L  S  R  Y  A  T  Q  L  C  F  S  P  Q  E  R  I  R  R  F  V  R  G  L  R  S  E  L  R  I  S  A  L  Q  V  A  A  T  A  K  S  F  Q   : E  M  V  D  F  D  V  I  L  G  M  T  W  L  S  P  N  F  A  I  L  D  C  N  A  K  T  V  T  L  A  K  P  G  T  D  P  L  V  W  E  G  D  Y  T  S  N  P  V  R  I  I  S  F  L  R  S  K  K  M  V  S  K  G  C  L  A  F  L  A  H  L  K  D  D  T  T  Q  V  P  S  I  E  S  V  S  V  V  R  E  F  L  D  V  F  P  A  D  L  P  G  M  P  P  D  R  D  I  D  F  C  I  D  L  K  P  G  T  R  P  I  S  I  P  P  Y  R  M  A  P  A  E  L  R  E  L  K  A  Q  L  Q  E  L  L  N  K  G  F  I  R  P  S  A  S  P  W  G  A  P  I  L  F  V  K  K  K  D  G  S  F  R  M  C  I  D  Y  </second_frame>
            <third_frame>   K  V  G  C  R  S  M  H  M  R  L  S  F  V  H  Y  Q  G  M  P  P  N  F  V  S  V  H  K  S  G  F  V  V  L  *  G  G  *  G  Q  S  C  G  F  Q  P  Y  R  *  R  L  Q  R  N  L  F  K  :  K  W  L  T  S  M  *  F  W  A  *  L  G  F  L  Q  I  L  R  S  W  I  V  M  L  K  L  *  R  *  P  S  L  G  Q  I  R  *  C  G  R  V  T  T  L  P  I  R  F  V  S  S  P  F  F  V  L  R  K  W  L  V  K  G  V  *  L  S  W  H  I  S  R  M  T  L  P  K  Y  L  R  L  S  R  F  R  W  S  V  S  F  W  M  C  S  L  Q  I  F  L  V  C  H  Q  I  G  I  L  T  S  V  L  T  L  N  R  V  L  A  P  F  L  Y  P  L  I  E  W  L  L  R  S  *  E  S  *  K  P  N  F  K  S  C  *  T  K  A  S  L  D  Q  V  H  L  L  G  V  L  R  F  C  L  *  R  R  R  M  G  V  F  E  C  A  *  T  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0284G15.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="68902" stop="69073"/>
                    <exon start="69819" stop="70345"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>699</number_coding_nucleotides>
                  <number_encoded_amino_acids>233</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QGRMSVNAYEAKFRALSRYATQLCFSPQERIRRFVRGLRSELRISALQVAATAKSFQEMVDFDVILGMTWLSPNFAILDCNAKTVTLAKPGTDPLVWEGDYTSNPVRIISFLRSKKMVSKGCLAFLAHLKDDTTQVPSIESVSVVREFLDVFPADLPGMPPDRDIDFCIDLKPGTRPISIPPYRMAPAELRELKAQLQELLNKGFIRPSASPWGAPILFVKKKDGSFRMCIDY</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="70918" PGL_stop="69567"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="70918" e_stop="69567"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.915"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.915">
            <gDNA_exon_boundary e_start="70918" e_stop="69567" e_length="1352"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70918" stop="70206"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E379315" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70918" stop="70323"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E375319" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70918" stop="70393"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E204434" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70847" stop="70168"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E368762" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70847" stop="70489"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E240817" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70398" stop="69740"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355232" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70329" stop="69567"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355244" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70329" stop="69668"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351414" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69926" stop="69595"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352716" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACTGCATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCCTCATGTTCCTTCTTGATCTTTGAGTATACCAATATATCATCAATAAATACGATCACAAATAGATCCAGATATAGCTTAAAAATCCCGTTCATCAAACTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATACCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAGAAGACACAAGCTCCTTGTAACTGATCGAACAAGTCATCAATGCGAGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTTAGTTGTCTGTAGTCTATGCACATTCGAAAACTCCCATCCTTCTTCTTCACAAACAAAATCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGCCTTTGTTCAACAACTCTTGAAGTTGGGCTTTTAACTCTCTTAACTCCGCAGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTACCCGGTTTAAGGTCAATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAGAAACTCACGGACCACCGAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGAACGAAGAAAGGAGATGATACGAACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAACGTCACAGTTTTAGCATTACAATCCAAGATCGCAAAATTTGGAGAAAGCCAAGTCATGCCCAGAATTACATCGAAGTCAACCATTTCTAAGATAACCAACTCTACATGAGTATTGCTCCCCATAAAAGTTACAAGACAAGACCTATACACCTTTTCAACTATCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATGTCAAGCAAATTCACAATGTAAATCAAGACCATTAGCAAATGCGGAAGATACATATGAAAATGTAGAGCCAGGGTCAAACAATACAAAATCCATGCAATCACAAACCGAAAGATTACCTGTGATAACAGCATCTGAT</gDNA_template>
            <first_frame> E  S  L  D  K  S  A  V  V  A  S  *  P  N  K  A  P  Y  F  *  H  I  S  R  S  Y  P  I  L  H  C  L  N  L  R  R  I  H  H  H  S  I  L  R  N  H  V  P  Q  E  G  H  C  I  *  P  K  L  T  L  R  E  L  G  I  K  L  F  L  P  Q  H  F  Q  Y  H  S  Q  M  L  L  M  F  L  L  D  L  *  V  Y  Q  Y  I  I  N  K  Y  D  H  K  *  I  Q  I  *  L  K  N  P  V  H  Q  T  H  E  R  S  R  G  I  R  K  T  K  R  H  H  Y  K  F  V  I  P  I  P  G  S  K  S  S  L  W  H  I  R  C  P  Y  F  Q  L  M  I  T  G  S  Q  V  N  L  R  E  D  T  S  S  L  *  L  I  E  Q  V  I  N  A  R  K  R  I  L  V  L  Y  G  Y  L  V  *  L  S  V  V  Y  A  H  S  K  T  P  I  L  L  L  H  K  Q  N  R  S  T  P  R  R  C  T  W  S  N  E  A  F  V  Q  Q  L  L  K  L  G  F  *  L  S  *  L  R  R  S  H  S  I  R  G  Y  R  N  G  A  S  T  R  F  K  V  N  T  E  V  N  I  P  I  W  W  H  T  R  K  I  C  R  E  H  I  Q  K  L  T  D  H  R  N  R  L  N  R  R  Y  L  G  S  V  I  L  E  M  C  Q  E  S  *  T  P  F  T  N  H  F  L  R  T  K  K  G  D  D  T  N  R  I  G  S  V  V  T  L  P  H  *  R  I  C  P  R  L  G  *  R  H  S  F  S  I  T  I  Q  D  R  K  I  W  R  K  P  S  H  A  Q  N  Y  I  E  V  N  H  F  *  D  N  Q  L  Y  M  S  I  A  P  H  K  S  Y  K  T  R  P  I  H  L  F  N  Y  H  R  L  T  H  R  S  R  N  T  N  R  H  V  K  Q  I  H  N  V  N  Q  D  H  *  Q  M  R  K  I  H  M  K  M  *  S  Q  G  Q  T  I  Q  N  P  C  N  H  K  P  K  D  Y  L  *  *  Q  H  L   </first_frame>
            <second_frame>  N  P  L  T  N  R  R  *  *  L  A  N  P  T  K  L  L  I  S  D  T  L  V  G  L  T  Q  F  F  T  V  S  I  L  E  G  S  T  I  T  P  S  L  E  T  T  C  P  K  K  D  T  A  S  S  Q  N  S  H  L  E  N  L  A  *  S  F  F  S  L  N  I  S  N  T  I  L  K  C  S  S  C  S  F  L  I  F  E  Y  T  N  I  S  S  I  N  T  I  T  N  R  S  R  Y  S  L  K  I  P  F  I  K  L  M  N  A  A  G  A  F  V  R  P  K  D  I  T  T  N  S  *  Y  P  Y  L  V  L  K  A  V  F  G  T  S  V  A  R  I  F  N  *  *  *  P  D  L  K  S  I  L  E  K  T  Q  A  P  C  N  *  S  N  K  S  S  M  R  G  R  G  Y  L  F  F  M  V  T  L  F  S  C  L  *  S  M  H  I  R  K  L  P  S  F  F  F  T  N  K  I  G  A  P  Q  G  D  A  L  G  L  M  K  P  L  F  N  N  S  *  S  W  A  F  N  S  L  N  S  A  G  A  I  L  *  G  G  I  E  M  G  R  V  P  G  L  R  S  I  Q  K  S  I  S  L  S  G  G  I  P  G  R  S  A  G  N  T  S  R  N  S  R  T  T  E  T  D  S  I  E  G  T  W  V  V  S  S  L  R  C  A  K  K  A  K  H  P  L  L  T  I  F  L  E  R  R  K  E  M  I  R  T  G  L  E  V  *  S  P  S  H  T  N  G  S  V  P  G  L  A  N  V  T  V  L  A  L  Q  S  K  I  A  K  F  G  E  S  Q  V  M  P  R  I  T  S  K  S  T  I  S  K  I  T  N  S  T  *  V  L  L  P  I  K  V  T  R  Q  D  L  Y  T  F  S  T  I  T  D  S  P  T  G  V  E  T  R  I  G  M  S  S  K  F  T  M  *  I  K  T  I  S  K  C  G  R  Y  I  *  K  C  R  A  R  V  K  Q  Y  K  I  H  A  I  T  N  R  K  I  T  C  D  N  S  I  *  </second_frame>
            <third_frame>   I  P  *  Q  I  G  G  S  S  *  L  T  Q  Q  S  S  L  F  L  T  H  *  *  V  L  P  N  S  S  L  S  Q  S  *  K  D  P  P  S  L  H  P  *  K  P  R  A  P  R  R  T  L  H  L  A  K  T  H  T  *  R  T  W  H  K  A  F  S  P  S  T  F  P  I  P  F  S  N  A  P  H  V  P  S  *  S  L  S  I  P  I  Y  H  Q  *  I  R  S  Q  I  D  P  D  I  A  *  K  S  R  S  S  N  S  *  T  Q  Q  G  H  S  *  D  Q  K  T  S  L  Q  I  R  N  T  H  T  W  F  *  K  Q  S  L  A  H  P  L  P  V  F  S  I  D  D  N  R  I  S  S  Q  S  *  R  R  H  K  L  L  V  T  D  R  T  S  H  Q  C  E  E  E  D  T  C  S  L  W  L  P  C  L  V  V  C  S  L  C  T  F  E  N  S  H  P  S  S  S  Q  T  K  S  E  H  P  K  E  M  H  L  V  *  *  S  L  C  S  T  T  L  E  V  G  L  L  T  L  L  T  P  Q  E  P  F  Y  K  G  V  *  K  W  G  E  Y  P  V  *  G  Q  Y  R  S  Q  Y  P  Y  L  V  A  Y  Q  E  D  L  Q  G  T  H  P  E  T  H  G  P  P  K  P  T  Q  S  K  V  L  G  *  C  H  P  *  D  V  P  R  K  L  N  T  L  Y  *  P  F  S  *  N  E  E  R  R  *  Y  E  P  D  W  K  C  S  H  P  P  T  L  T  D  L  S  Q  A  W  L  T  S  Q  F  *  H  Y  N  P  R  S  Q  N  L  E  K  A  K  S  C  P  E  L  H  R  S  Q  P  F  L  R  *  P  T  L  H  E  Y  C  S  P  *  K  L  Q  D  K  T  Y  T  P  F  Q  L  S  Q  T  H  P  P  E  *  K  H  E  *  A  C  Q  A  N  S  Q  C  K  S  R  P  L  A  N  A  E  D  T  Y  E  N  V  E  P  G  S  N  N  T  K  S  M  Q  S  Q  T  E  R  L  P  V  I  T  A  S  D </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0284G15.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="70191" stop="69946"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>243</number_coding_nucleotides>
                  <number_encoded_amino_acids>81</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GGIEMGRVPGLRSIQKSISLSGGIPGRSAGNTSRNSRTTETDSIEGTWVVSSLRCAKKAKHPLLTIFLERRKEMIRTGLEV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0284G15.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="70213" stop="70013"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LRRSHSIRGYRNGASTRFKVNTEVNIPIWWHTRKICREHIQKLTDHRNRLNRRYLGSVILEMCQES*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0284G15.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="70722" stop="70525"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SFFSLNISNTILKCSSCSFLIFEYTNISSINTITNRSRYSLKIPFIKLMNAAGAFVRPKDITTNS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="72397" PGL_stop="72221"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="72397" e_stop="72221"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.955"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.955">
            <gDNA_exon_boundary e_start="72397" e_stop="72221" e_length="177"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72397" stop="72221"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E577888" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTACATCTCCTACCATACAATGCTTCAAATGGAGCCATATCAATGCTTGAGTGATAGCTATTATTGTATGAAAACTCCGCTAAGGGTAAGAAGTTATCCCAATGGCCACCAAATTCTATCACACACACATGAAGCATATCCTCCAACACTTGAATCGTTCGCTCAGACTGACCATCG</gDNA_template>
            <first_frame> L  H  L  L  P  Y  N  A  S  N  G  A  I  S  M  L  E  *  *  L  L  L  Y  E  N  S  A  K  G  K  K  L  S  Q  W  P  P  N  S  I  T  H  T  *  S  I  S  S  N  T  *  I  V  R  S  D  *  P  S </first_frame>
            <second_frame>  Y  I  S  Y  H  T  M  L  Q  M  E  P  Y  Q  C  L  S  D  S  Y  Y  C  M  K  T  P  L  R  V  R  S  Y  P  N  G  H  Q  I  L  S  H  T  H  E  A  Y  P  P  T  L  E  S  F  A  Q  T  D  H   </second_frame>
            <third_frame>   T  S  P  T  I  Q  C  F  K  W  S  H  I  N  A  *  V  I  A  I  I  V  *  K  L  R  *  G  *  E  V  I  P  M  A  T  K  F  Y  H  T  H  M  K  H  I  L  Q  H  L  N  R  S  L  R  L  T  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0284G15.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="-" PGL_start="73612" PGL_stop="73053"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="73612" e_stop="73053"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.925"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.925">
            <gDNA_exon_boundary e_start="73612" e_stop="73053" e_length="560"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73612" stop="73056"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E396058" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73612" stop="73056"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E396054" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73611" stop="73053"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E231589" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73611" stop="73066"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E241959" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73611" stop="73139"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E236652" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATCGATTCTCCTTCTCTCTCTTTCTGTTCTTTTCTTTTTCTTATCAAAACCTCTTTCTTTTACCCTAATTAGCATATAATTTAAGAATAAAATATGGCAATAATAACCCACTAATTTACTCAAGGTTACCTCTTTTAACCCCCAAGTAATTAGACTTATTAACATAAACCCACTAACTTTATAATTAAAGTAGGAATAGTCCAAAACGTCCCTTAAAACGTGTAAAGAAATTTGACCTCGCCTGAGATTACGCAGCCTGTGACGGGTCGTCGTGCCTGCGACGGTCCGTCCTGCTGCTCCGTCACAGAGTTCAGAGACTGAAATTCTCTGAAGAGTGTGTGACGGTCCGTCACGCCTGTGACGGTCCGTCCTGCTATTCCGTTACGAAGTTCAGAGAGTCGATTTTCAGTACCCAATTTCAGAATTTCTAAGTGTTTTGAAACGAGACCCCTCGACGGTCCGTCGTGCCCATGACGGTCCGTCGTGGGTTCCGTCGTCTCAGCCTGTTTTTCCAGAAATAAAATCTGCTACTCAAAACGACTAAACAGGTCGTTACAATA</gDNA_template>
            <first_frame> I  D  S  P  S  L  S  F  C  S  F  L  F  L  I  K  T  S  F  F  Y  P  N  *  H  I  I  *  E  *  N  M  A  I  I  T  H  *  F  T  Q  G  Y  L  F  *  P  P  S  N  *  T  Y  *  H  K  P  T  N  F  I  I  K  V  G  I  V  Q  N  V  P  *  N  V  *  R  N  L  T  S  P  E  I  T  Q  P  V  T  G  R  R  A  C  D  G  P  S  C  C  S  V  T  E  F  R  D  *  N  S  L  K  S  V  *  R  S  V  T  P  V  T  V  R  P  A  I  P  L  R  S  S  E  S  R  F  S  V  P  N  F  R  I  S  K  C  F  E  T  R  P  L  D  G  P  S  C  P  *  R  S  V  V  G  S  V  V  S  A  C  F  S  R  N  K  I  C  Y  S  K  R  L  N  R  S  L  Q   </first_frame>
            <second_frame>  S  I  L  L  L  S  L  S  V  L  F  F  F  L  S  K  P  L  S  F  T  L  I  S  I  *  F  K  N  K  I  W  Q  *  *  P  T  N  L  L  K  V  T  S  F  N  P  Q  V  I  R  L  I  N  I  N  P  L  T  L  *  L  K  *  E  *  S  K  T  S  L  K  T  C  K  E  I  *  P  R  L  R  L  R  S  L  *  R  V  V  V  P  A  T  V  R  P  A  A  P  S  Q  S  S  E  T  E  I  L  *  R  V  C  D  G  P  S  R  L  *  R  S  V  L  L  F  R  Y  E  V  Q  R  V  D  F  Q  Y  P  I  S  E  F  L  S  V  L  K  R  D  P  S  T  V  R  R  A  H  D  G  P  S  W  V  P  S  S  Q  P  V  F  P  E  I  K  S  A  T  Q  N  D  *  T  G  R  Y  N  </second_frame>
            <third_frame>   R  F  S  F  S  L  F  L  F  F  S  F  S  Y  Q  N  L  F  L  L  P  *  L  A  Y  N  L  R  I  K  Y  G  N  N  N  P  L  I  Y  S  R  L  P  L  L  T  P  K  *  L  D  L  L  T  *  T  H  *  L  Y  N  *  S  R  N  S  P  K  R  P  L  K  R  V  K  K  F  D  L  A  *  D  Y  A  A  C  D  G  S  S  C  L  R  R  S  V  L  L  L  R  H  R  V  Q  R  L  K  F  S  E  E  C  V  T  V  R  H  A  C  D  G  P  S  C  Y  S  V  T  K  F  R  E  S  I  F  S  T  Q  F  Q  N  F  *  V  F  *  N  E  T  P  R  R  S  V  V  P  M  T  V  R  R  G  F  R  R  L  S  L  F  F  Q  K  *  N  L  L  L  K  T  T  K  Q  V  V  T  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0284G15.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="+" PGL_start="73859" PGL_stop="74377"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="73859" e_stop="74377"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.902"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.902">
            <gDNA_exon_boundary e_start="73859" e_stop="74377" e_length="519"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73859" stop="74377"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E242359" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CCTAATCTCTTTGTTAATGATGAGACCTTGGCATAAAAGAAGGCTTGATGAACGAAAGTAGTGAGATTAGGGGATCGGGTGCCACGTTCCGGTACCAGGATAGTATATGAGGATCGGAGTGTCACGTTCCGACACCAGGATAGAATATGGATCGGGTGCCACGTTCCGGTACCAGGATAGAATGAGGATCGGAGTGTCACGTTCCGACACCAGGATAGTATATGGATCGGGTGCCACGTTCCGGTACCAGGATAGAATGAGGATCGGAGTGTCACGTTCCGACACCAGGATAGTATATTGAGGAGCGGAGTGTCACGTACCGACACGAGAGGAATAAAGATAATGAATCTTGAAAGATGTTAATATATTCAATCTAATGAACCTAATTCCCAAATGAGTATGATGAGGAGGTGTGAGTCCTCATTGATGAGCTTAGTGTTGTAACCAAGGGTTATGGTAATCGTAAATGCTACATGCTAAGGATATTAGTTGATTTTATGATATTATCTGATATATACT</gDNA_template>
            <first_frame> P  N  L  F  V  N  D  E  T  L  A  *  K  K  A  *  *  T  K  V  V  R  L  G  D  R  V  P  R  S  G  T  R  I  V  Y  E  D  R  S  V  T  F  R  H  Q  D  R  I  W  I  G  C  H  V  P  V  P  G  *  N  E  D  R  S  V  T  F  R  H  Q  D  S  I  W  I  G  C  H  V  P  V  P  G  *  N  E  D  R  S  V  T  F  R  H  Q  D  S  I  L  R  S  G  V  S  R  T  D  T  R  G  I  K  I  M  N  L  E  R  C  *  Y  I  Q  S  N  E  P  N  S  Q  M  S  M  M  R  R  C  E  S  S  L  M  S  L  V  L  *  P  R  V  M  V  I  V  N  A  T  C  *  G  Y  *  L  I  L  *  Y  Y  L  I  Y  T </first_frame>
            <second_frame>  L  I  S  L  L  M  M  R  P  W  H  K  R  R  L  D  E  R  K  *  *  D  *  G  I  G  C  H  V  P  V  P  G  *  Y  M  R  I  G  V  S  R  S  D  T  R  I  E  Y  G  S  G  A  T  F  R  Y  Q  D  R  M  R  I  G  V  S  R  S  D  T  R  I  V  Y  G  S  G  A  T  F  R  Y  Q  D  R  M  R  I  G  V  S  R  S  D  T  R  I  V  Y  *  G  A  E  C  H  V  P  T  R  E  E  *  R  *  *  I  L  K  D  V  N  I  F  N  L  M  N  L  I  P  K  *  V  *  *  G  G  V  S  P  H  *  *  A  *  C  C  N  Q  G  L  W  *  S  *  M  L  H  A  K  D  I  S  *  F  Y  D  I  I  *  Y  I   </second_frame>
            <third_frame>   *  S  L  C  *  *  *  D  L  G  I  K  E  G  L  M  N  E  S  S  E  I  R  G  S  G  A  T  F  R  Y  Q  D  S  I  *  G  S  E  C  H  V  P  T  P  G  *  N  M  D  R  V  P  R  S  G  T  R  I  E  *  G  S  E  C  H  V  P  T  P  G  *  Y  M  D  R  V  P  R  S  G  T  R  I  E  *  G  S  E  C  H  V  P  T  P  G  *  Y  I  E  E  R  S  V  T  Y  R  H  E  R  N  K  D  N  E  S  *  K  M  L  I  Y  S  I  *  *  T  *  F  P  N  E  Y  D  E  E  V  *  V  L  I  D  E  L  S  V  V  T  K  G  Y  G  N  R  K  C  Y  M  L  R  I  L  V  D  F  M  I  L  S  D  I  Y  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0284G15.1" strand="+"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="73962" stop="74159"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YMRIGVSRSDTRIEYGSGATFRYQDRMRIGVSRSDTRIVYGSGATFRYQDRMRIGVSRSDTRIVY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="+" PGL_start="74520" PGL_stop="74718"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="74520" e_stop="74718"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.925"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.925">
            <gDNA_exon_boundary e_start="74520" e_stop="74718" e_length="199"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="74520" stop="74718"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E298638" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCATTATTCCGGATATCAGGGTGAGCTAATGCTTCTAGCTTGGACTGGATCTTCCTCTTCATGTCTTGATGCCTTGAAGTTCCGGCATGGACTAGCTTTTATGTATTTTTAGCTTCTTAGAAACTCTTAGATTTAGTAATTTGAAGTAGATGTTCTTGTGATGATGACTTCCAGATTTTGGGGAAATAATAGTTATTGA</gDNA_template>
            <first_frame> S  L  F  R  I  S  G  *  A  N  A  S  S  L  D  W  I  F  L  F  M  S  *  C  L  E  V  P  A  W  T  S  F  Y  V  F  L  A  S  *  K  L  L  D  L  V  I  *  S  R  C  S  C  D  D  D  F  Q  I  L  G  K  *  *  L  L  </first_frame>
            <second_frame>  H  Y  S  G  Y  Q  G  E  L  M  L  L  A  W  T  G  S  S  S  S  C  L  D  A  L  K  F  R  H  G  L  A  F  M  Y  F  *  L  L  R  N  S  *  I  *  *  F  E  V  D  V  L  V  M  M  T  S  R  F  W  G  N  N  S  Y  * </second_frame>
            <third_frame>   I  I  P  D  I  R  V  S  *  C  F  *  L  G  L  D  L  P  L  H  V  L  M  P  *  S  S  G  M  D  *  L  L  C  I  F  S  F  L  E  T  L  R  F  S  N  L  K  *  M  F  L  *  *  *  L  P  D  F  G  E  I  I  V  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0284G15.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="+" PGL_start="79845" PGL_stop="84639"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="79845" e_stop="80375"/>
            <exon e_start="81259" e_stop="81370"/>
            <exon e_start="81977" e_stop="82151"/>
            <exon e_start="82348" e_stop="82516"/>
            <exon e_start="82685" e_stop="82909"/>
            <exon e_start="83096" e_stop="83371"/>
            <exon e_start="83689" e_stop="83967"/>
            <exon e_start="84126" e_stop="84639"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.978" e_score="1.000"/>
          <exon-intron don_prob="0.191" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.957" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.911" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.935" acc_prob="0.997" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="79845" e_stop="80375" e_length="531"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.978">
            <gDNA_intron_boundary i_start="80376" i_stop="81258" i_length="883"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="81259" e_stop="81370" e_length="112"/>
          </exon>
          <intron i_serial="2" don_prob="0.191" acc_prob="0.998">
            <gDNA_intron_boundary i_start="81371" i_stop="81976" i_length="606"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="81977" e_stop="82151" e_length="175"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.993">
            <gDNA_intron_boundary i_start="82152" i_stop="82347" i_length="196"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="82348" e_stop="82516" e_length="169"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="0.957">
            <gDNA_intron_boundary i_start="82517" i_stop="82684" i_length="168"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="82685" e_stop="82909" e_length="225"/>
          </exon>
          <intron i_serial="5" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="82910" i_stop="83095" i_length="186"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="83096" e_stop="83371" e_length="276"/>
          </exon>
          <intron i_serial="6" don_prob="0.911" acc_prob="0.995">
            <gDNA_intron_boundary i_start="83372" i_stop="83688" i_length="317"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="83689" e_stop="83967" e_length="279"/>
          </exon>
          <intron i_serial="7" don_prob="0.935" acc_prob="0.997">
            <gDNA_intron_boundary i_start="83968" i_stop="84125" i_length="158"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="84126" e_stop="84639" e_length="514"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79845" stop="80375"/>
              <exon start="81259" stop="81355"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E542915" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79846" stop="80375"/>
              <exon start="81259" stop="81296"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E302912" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79992" stop="80375"/>
              <exon start="81259" stop="81281"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E329185" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80084" stop="80375"/>
              <exon start="81259" stop="81370"/>
              <exon start="81977" stop="82151"/>
              <exon start="82348" stop="82516"/>
              <exon start="82685" stop="82909"/>
              <exon start="83096" stop="83371"/>
              <exon start="83689" stop="83967"/>
              <exon start="84126" stop="84570"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E746114" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81979" stop="82151"/>
              <exon start="82348" stop="82516"/>
              <exon start="82685" stop="82909"/>
              <exon start="83096" stop="83371"/>
              <exon start="83689" stop="83713"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E727571" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81979" stop="82151"/>
              <exon start="82348" stop="82516"/>
              <exon start="82685" stop="82897"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E726085" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81993" stop="82151"/>
              <exon start="82348" stop="82516"/>
              <exon start="82685" stop="82895"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325177" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82038" stop="82151"/>
              <exon start="82348" stop="82516"/>
              <exon start="82685" stop="82909"/>
              <exon start="83096" stop="83151"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E698362" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82042" stop="82151"/>
              <exon start="82348" stop="82516"/>
              <exon start="82685" stop="82909"/>
              <exon start="83096" stop="83308"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E263109" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82043" stop="82151"/>
              <exon start="82348" stop="82516"/>
              <exon start="82685" stop="82909"/>
              <exon start="83096" stop="83139"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E256181" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82064" stop="82151"/>
              <exon start="82348" stop="82516"/>
              <exon start="82685" stop="82909"/>
              <exon start="83096" stop="83269"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E207981" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82064" stop="82151"/>
              <exon start="82348" stop="82516"/>
              <exon start="82685" stop="82909"/>
              <exon start="83096" stop="83258"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E214511" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83293" stop="83371"/>
              <exon start="83689" stop="83935"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308363" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83771" stop="83967"/>
              <exon start="84126" stop="84490"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E548792" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83808" stop="83967"/>
              <exon start="84126" stop="84468"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351126" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83808" stop="83967"/>
              <exon start="84126" stop="84468"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357285" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83808" stop="83967"/>
              <exon start="84126" stop="84468"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357496" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83808" stop="83967"/>
              <exon start="84126" stop="84468"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357501" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83813" stop="83967"/>
              <exon start="84126" stop="84518"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E555136" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83839" stop="83967"/>
              <exon start="84126" stop="84513"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E350820" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83875" stop="83967"/>
              <exon start="84126" stop="84639"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303930" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTTTTTTTATTGTCATCCTCGCAATTTTCACCCAAAATCACACGGTCCAATTGGATCCCCAATTTCGGATTGCGATGCTTCTTATAAATACAAACAATTTCTACCATGCTTTCTCCCTCGTTTTCTCCAAACACAAATTTCCTCTATCTGCAGCCTCTCCTCCACCACCCAAATCATCATTTTCTCAGGCCTCTGATTCAATTACAAAGAACAAATTGAAGTTACCTTTGGTTTCTTTGACCAAATCTTTGCCAAATACACAATTTGATCTTATTCAGAGCGAGAAAATGGTGAATTTCATGATGGATAAGTATATTGTTCCCAGTTTTGTTGTTTCTCTATTGGGGTTCCTTCTTCTTTATGTTTTGCGACCAAGAACCCCCAATTATAAGAAAATGGATCTTAAATCTACCCGAAAATGTGAAACCCACAACGTAATTTCTAGAAAATTGGAGAAAGGGACCGATGCCGATGTTATAATTGTTGGAGCTGGGGTTGCTGGTGCTGCTCTTGCTCATACCCTTGCTAAG : GAAGGACGAAATGTTCACGTCATCGAAAGGGATTTGACAGAGCCGGACCGGATTGTTGGCGAATTGCTTCAGCCTGGGGGTTATCTTAAATTGATTGAGTTGGGCATTGAAG : ATTGTGTTGAGGATATTGATGCCCAGCGGGTGGTTGGATATGCTCTTTTCAAGGATGGAAAGAGCACAAATGTTTCCTATCCCTTGAAAAACTTCCATTCGGATGTGGCTGGGAGAAGCTTTCACAATGGGCGCTTCATACAGAAGATGAGAGAAAAAGCAGCTACTCTTCCCAA : TGTACGATTGGAACAAGGCACCGTAACATCCCTGATTGAAGAAAATGGATCCATTAAGGGTGTTCAGTACAAAACTAAGGCTGGCCAAGAACTTAAAGCACATGCTCCTCTTACAGTAGTTTGTGATGGGTGCTTCTCAAACTTGCGACGCTCGCTTTGTGACCCTAAG : GTTGATGTTCCCTCTTGCTTTGTTGGTCTGGTATTGGAATTGGAGAATGATCGACTTCCATACCCAAACCATGGGCATGTTATTCTGGCAGATCCTTCTCCCATCTTATTTTATCCTATCAGTAGCACGGAAATTCGCTGCTTGGTCGATGTACCTGGTCAAAAGCTTCCTTCTCTTGCTAATGGTGATATGGCAAATTATTTGAAAACTATGGTAGCTCCCCAG : GTACCACCTGAGCTACGTGATGCGTTTCTATCTGCAATTGATAAGGGGCATATTAAAACTATGCCAAACAGGAGCATGCCAGCTGCTCCCTATCCTACACCTGGAGCTCTGTTGCTAGGCGATTCTTTCAACATGCGCCATCCATTAACTGGTGGGGGAATGACTGTTGCGCTTTCAGACATTGCAGTATTAAGGAATCTTCTTATGCCATTGCAAGACCTGAATGACGCAGATGAGTTGTGTAAATATCTGGAGTCATTTTATACTTTGCGCAAG : CCAGTGGCTTCCACCATAAATACTTTGGCTGGAGCTCTGTATAAGGTGTTCTGTGCTTCTCCTGATCAAGCGAGGAGGGAGATGCGAGATGCGTGTTTTGACTATTTGAGCCTTGGAGGCACTTGTTCAACTGGACCTGTAGCTCTACTCTCTGGTCTTGATCCTAATCCAATGAGCTTGGTGCTCCATTTCTTTGCAGTGGCCGTTTATGGAGTTGGTCGTTTACTTGTACCTTTTCCTTCTCCAAAGAAGTTGTGGATCGGAGCTAAATTAATATTG : TCTGCATCAGGCATCATATTTCCCATCATAAAGGCAGAAGGGATCCGGCAAATGTTCTTTCCAACAACAATACCAGCATATCACAGAGCTCCTCCCGTGAAGACGGAGTCAGATTAAGCAGAAAATTTGTTGAAGTTTTGTTCCATGAATAGCATTAACATTTTTGCAGTTCCTTTCTCGAAGCACGAAATGTAAGTTCCACTCTCCCCTCACCCCAAACCCTACAAATAGAATAAGAATGACGACGAAACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTGAAATCTACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTTAAATCTAGTCAGACTCCCTACTCTGTAGAAATGTATATTGTGGCATTCACTTTATATCTTAGAGAGTTCAATTTGTACGTCAGTTGTAGCTCTGAGATAGACATCAACGGTTATGTTTCTGTATTGTACATCACATTGATGTATGTATCAG</gDNA_template>
            <first_frame> F  F  F  I  V  I  L  A  I  F  T  Q  N  H  T  V  Q  L  D  P  Q  F  R  I  A  M  L  L  I  N  T  N  N  F  Y  H  A  F  S  L  V  F  S  K  H  K  F  P  L  S  A  A  S  P  P  P  P  K  S  S  F  S  Q  A  S  D  S  I  T  K  N  K  L  K  L  P  L  V  S  L  T  K  S  L  P  N  T  Q  F  D  L  I  Q  S  E  K  M  V  N  F  M  M  D  K  Y  I  V  P  S  F  V  V  S  L  L  G  F  L  L  L  Y  V  L  R  P  R  T  P  N  Y  K  K  M  D  L  K  S  T  R  K  C  E  T  H  N  V  I  S  R  K  L  E  K  G  T  D  A  D  V  I  I  V  G  A  G  V  A  G  A  A  L  A  H  T  L  A  K  :  E  G  R  N  V  H  V  I  E  R  D  L  T  E  P  D  R  I  V  G  E  L  L  Q  P  G  G  Y  L  K  L  I  E  L  G  I  E   : D  C  V  E  D  I  D  A  Q  R  V  V  G  Y  A  L  F  K  D  G  K  S  T  N  V  S  Y  P  L  K  N  F  H  S  D  V  A  G  R  S  F  H  N  G  R  F  I  Q  K  M  R  E  K  A  A  T  L  P  N :   V  R  L  E  Q  G  T  V  T  S  L  I  E  E  N  G  S  I  K  G  V  Q  Y  K  T  K  A  G  Q  E  L  K  A  H  A  P  L  T  V  V  C  D  G  C  F  S  N  L  R  R  S  L  C  D  P  K  :  V  D  V  P  S  C  F  V  G  L  V  L  E  L  E  N  D  R  L  P  Y  P  N  H  G  H  V  I  L  A  D  P  S  P  I  L  F  Y  P  I  S  S  T  E  I  R  C  L  V  D  V  P  G  Q  K  L  P  S  L  A  N  G  D  M  A  N  Y  L  K  T  M  V  A  P  Q  :  V  P  P  E  L  R  D  A  F  L  S  A  I  D  K  G  H  I  K  T  M  P  N  R  S  M  P  A  A  P  Y  P  T  P  G  A  L  L  L  G  D  S  F  N  M  R  H  P  L  T  G  G  G  M  T  V  A  L  S  D  I  A  V  L  R  N  L  L  M  P  L  Q  D  L  N  D  A  D  E  L  C  K  Y  L  E  S  F  Y  T  L  R  K  :  P  V  A  S  T  I  N  T  L  A  G  A  L  Y  K  V  F  C  A  S  P  D  Q  A  R  R  E  M  R  D  A  C  F  D  Y  L  S  L  G  G  T  C  S  T  G  P  V  A  L  L  S  G  L  D  P  N  P  M  S  L  V  L  H  F  F  A  V  A  V  Y  G  V  G  R  L  L  V  P  F  P  S  P  K  K  L  W  I  G  A  K  L  I  L  :  S  A  S  G  I  I  F  P  I  I  K  A  E  G  I  R  Q  M  F  F  P  T  T  I  P  A  Y  H  R  A  P  P  V  K  T  E  S  D  *  A  E  N  L  L  K  F  C  S  M  N  S  I  N  I  F  A  V  P  F  S  K  H  E  M  *  V  P  L  S  P  H  P  K  P  Y  K  *  N  K  N  D  D  E  T  L  L  *  A  Y  Y  T  K  R  N  F  K  C  T  Y  S  L  K  S  T  L  L  *  A  Y  Y  T  K  R  N  F  K  C  T  Y  S  F  K  S  S  Q  T  P  Y  S  V  E  M  Y  I  V  A  F  T  L  Y  L  R  E  F  N  L  Y  V  S  C  S  S  E  I  D  I  N  G  Y  V  S  V  L  Y  I  T  L  M  Y  V  S  </first_frame>
            <second_frame>  F  F  L  L  S  S  S  Q  F  S  P  K  I  T  R  S  N  W  I  P  N  F  G  L  R  C  F  L  *  I  Q  T  I  S  T  M  L  S  P  S  F  S  P  N  T  N  F  L  Y  L  Q  P  L  L  H  H  P  N  H  H  F  L  R  P  L  I  Q  L  Q  R  T  N  *  S  Y  L  W  F  L  *  P  N  L  C  Q  I  H  N  L  I  L  F  R  A  R  K  W  *  I  S  *  W  I  S  I  L  F  P  V  L  L  F  L  Y  W  G  S  F  F  F  M  F  C  D  Q  E  P  P  I  I  R  K  W  I  L  N  L  P  E  N  V  K  P  T  T  *  F  L  E  N  W  R  K  G  P  M  P  M  L  *  L  L  E  L  G  L  L  V  L  L  L  L  I  P  L  L  R :   K  D  E  M  F  T  S  S  K  G  I  *  Q  S  R  T  G  L  L  A  N  C  F  S  L  G  V  I  L  N  *  L  S  W  A  L  K  :  I  V  L  R  I  L  M  P  S  G  W  L  D  M  L  F  S  R  M  E  R  A  Q  M  F  P  I  P  *  K  T  S  I  R  M  W  L  G  E  A  F  T  M  G  A  S  Y  R  R  *  E  K  K  Q  L  L  F  P   : M  Y  D  W  N  K  A  P  *  H  P  *  L  K  K  M  D  P  L  R  V  F  S  T  K  L  R  L  A  K  N  L  K  H  M  L  L  L  Q  *  F  V  M  G  A  S  Q  T  C  D  A  R  F  V  T  L  R :   L  M  F  P  L  A  L  L  V  W  Y  W  N  W  R  M  I  D  F  H  T  Q  T  M  G  M  L  F  W  Q  I  L  L  P  S  Y  F  I  L  S  V  A  R  K  F  A  A  W  S  M  Y  L  V  K  S  F  L  L  L  L  M  V  I  W  Q  I  I  *  K  L  W  *  L  P  R :   Y  H  L  S  Y  V  M  R  F  Y  L  Q  L  I  R  G  I  L  K  L  C  Q  T  G  A  C  Q  L  L  P  I  L  H  L  E  L  C  C  *  A  I  L  S  T  C  A  I  H  *  L  V  G  E  *  L  L  R  F  Q  T  L  Q  Y  *  G  I  F  L  C  H  C  K  T  *  M  T  Q  M  S  C  V  N  I  W  S  H  F  I  L  C  A  S :   Q  W  L  P  P  *  I  L  W  L  E  L  C  I  R  C  S  V  L  L  L  I  K  R  G  G  R  C  E  M  R  V  L  T  I  *  A  L  E  A  L  V  Q  L  D  L  *  L  Y  S  L  V  L  I  L  I  Q  *  A  W  C  S  I  S  L  Q  W  P  F  M  E  L  V  V  Y  L  Y  L  F  L  L  Q  R  S  C  G  S  E  L  N  *  Y  C :   L  H  Q  A  S  Y  F  P  S  *  R  Q  K  G  S  G  K  C  S  F  Q  Q  Q  Y  Q  H  I  T  E  L  L  P  *  R  R  S  Q  I  K  Q  K  I  C  *  S  F  V  P  *  I  A  L  T  F  L  Q  F  L  S  R  S  T  K  C  K  F  H  S  P  L  T  P  N  P  T  N  R  I  R  M  T  T  K  P  Y  C  R  H  I  I  P  K  G  T  S  S  V  R  I  H  *  N  L  P  Y  C  R  H  I  I  P  K  G  T  S  S  V  R  I  H  L  N  L  V  R  L  P  T  L  *  K  C  I  L  W  H  S  L  Y  I  L  E  S  S  I  C  T  S  V  V  A  L  R  *  T  S  T  V  M  F  L  Y  C  T  S  H  *  C  M  Y  Q </second_frame>
            <third_frame>   F  F  Y  C  H  P  R  N  F  H  P  K  S  H  G  P  I  G  S  P  I  S  D  C  D  A  S  Y  K  Y  K  Q  F  L  P  C  F  L  P  R  F  L  Q  T  Q  I  S  S  I  C  S  L  S  S  T  T  Q  I  I  I  F  S  G  L  *  F  N  Y  K  E  Q  I  E  V  T  F  G  F  F  D  Q  I  F  A  K  Y  T  I  *  S  Y  S  E  R  E  N  G  E  F  H  D  G  *  V  Y  C  S  Q  F  C  C  F  S  I  G  V  P  S  S  L  C  F  A  T  K  N  P  Q  L  *  E  N  G  S  *  I  Y  P  K  M  *  N  P  Q  R  N  F  *  K  I  G  E  R  D  R  C  R  C  Y  N  C  W  S  W  G  C  W  C  C  S  C  S  Y  P  C  *   : G  R  T  K  C  S  R  H  R  K  G  F  D  R  A  G  P  D  C  W  R  I  A  S  A  W  G  L  S  *  I  D  *  V  G  H  *  R :   L  C  *  G  Y  *  C  P  A  G  G  W  I  C  S  F  Q  G  W  K  E  H  K  C  F  L  S  L  E  K  L  P  F  G  C  G  W  E  K  L  S  Q  W  A  L  H  T  E  D  E  R  K  S  S  Y  S  S  Q  :  C  T  I  G  T  R  H  R  N  I  P  D  *  R  K  W  I  H  *  G  C  S  V  Q  N  *  G  W  P  R  T  *  S  T  C  S  S  Y  S  S  L  *  W  V  L  L  K  L  A  T  L  A  L  *  P  *   : G  *  C  S  L  L  L  C  W  S  G  I  G  I  G  E  *  S  T  S  I  P  K  P  W  A  C  Y  S  G  R  S  F  S  H  L  I  L  S  Y  Q  *  H  G  N  S  L  L  G  R  C  T  W  S  K  A  S  F  S  C  *  W  *  Y  G  K  L  F  E  N  Y  G  S  S  P   : G  T  T  *  A  T  *  C  V  S  I  C  N  *  *  G  A  Y  *  N  Y  A  K  Q  E  H  A  S  C  S  L  S  Y  T  W  S  S  V  A  R  R  F  F  Q  H  A  P  S  I  N  W  W  G  N  D  C  C  A  F  R  H  C  S  I  K  E  S  S  Y  A  I  A  R  P  E  *  R  R  *  V  V  *  I  S  G  V  I  L  Y  F  A  Q   : A  S  G  F  H  H  K  Y  F  G  W  S  S  V  *  G  V  L  C  F  S  *  S  S  E  E  G  D  A  R  C  V  F  *  L  F  E  P  W  R  H  L  F  N  W  T  C  S  S  T  L  W  S  *  S  *  S  N  E  L  G  A  P  F  L  C  S  G  R  L  W  S  W  S  F  T  C  T  F  S  F  S  K  E  V  V  D  R  S  *  I  N  I   : V  C  I  R  H  H  I  S  H  H  K  G  R  R  D  P  A  N  V  L  S  N  N  N  T  S  I  S  Q  S  S  S  R  E  D  G  V  R  L  S  R  K  F  V  E  V  L  F  H  E  *  H  *  H  F  C  S  S  F  L  E  A  R  N  V  S  S  T  L  P  S  P  Q  T  L  Q  I  E  *  E  *  R  R  N  L  I  V  G  I  L  Y  Q  K  E  L  Q  V  Y  V  F  I  E  I  Y  L  I  V  G  I  L  Y  Q  K  E  L  Q  V  Y  V  F  I  *  I  *  S  D  S  L  L  C  R  N  V  Y  C  G  I  H  F  I  S  *  R  V  Q  F  V  R  Q  L  *  L  *  D  R  H  Q  R  L  C  F  C  I  V  H  H  I  D  V  C  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0284G15.1" strand="+"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="79845" stop="80375"/>
                    <exon start="81259" stop="81370"/>
                    <exon start="81977" stop="82151"/>
                    <exon start="82348" stop="82516"/>
                    <exon start="82685" stop="82909"/>
                    <exon start="83096" stop="83371"/>
                    <exon start="83689" stop="83967"/>
                    <exon start="84126" stop="84242"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1881</number_coding_nucleotides>
                  <number_encoded_amino_acids>627</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FFFIVILAIFTQNHTVQLDPQFRIAMLLINTNNFYHAFSLVFSKHKFPLSAASPPPPKSSFSQASDSITKNKLKLPLVSLTKSLPNTQFDLIQSEKMVNFMMDKYIVPSFVVSLLGFLLLYVLRPRTPNYKKMDLKSTRKCETHNVISRKLEKGTDADVIIVGAGVAGAALAHTLAKEGRNVHVIERDLTEPDRIVGELLQPGGYLKLIELGIEDCVEDIDAQRVVGYALFKDGKSTNVSYPLKNFHSDVAGRSFHNGRFIQKMREKAATLPNVRLEQGTVTSLIEENGSIKGVQYKTKAGQELKAHAPLTVVCDGCFSNLRRSLCDPKVDVPSCFVGLVLELENDRLPYPNHGHVILADPSPILFYPISSTEIRCLVDVPGQKLPSLANGDMANYLKTMVAPQVPPELRDAFLSAIDKGHIKTMPNRSMPAAPYPTPGALLLGDSFNMRHPLTGGGMTVALSDIAVLRNLLMPLQDLNDADELCKYLESFYTLRKPVASTINTLAGALYKVFCASPDQARREMRDACFDYLSLGGTCSTGPVALLSGLDPNPMSLVLHFFAVAVYGVGRLLVPFPSPKKLWIGAKLILSASGIIFPIIKAEGIRQMFFPTTIPAYHRAPPVKTESD*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0284G15.1" strand="+"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="84447" stop="84638"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>192</number_coding_nucleotides>
                  <number_encoded_amino_acids>64</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AYYTKRNFKCTYSFKSSQTPYSVEMYIVAFTLYLREFNLYVSCSSEIDINGYVSVLYITLMYVS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="18" PGL_strand="-" PGL_start="84576" PGL_stop="84329"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="84576" e_stop="84329"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.980"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.980">
            <gDNA_exon_boundary e_start="84576" e_stop="84329" e_length="248"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84576" stop="84329"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277554" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TACAACTGACGTACAAATTGAACTCTCTAAGATATAAAGTGAATGCCACAATATACATTTCTACAGAGTAGGGAGTCTGACTAGATTTAAATGAATACGTACACTTGAAGTTCCTTTTGGTATAATATGCCTACAATAAGGTAGATTTCAATGAATACGTACACTTGAAGTTCCTTTTGGTATAATATGCCTACAATAAGGTTTCGTCGTCATTCTTATTCTATTTGTAGGGTTTGGGGTGAGGGGAG</gDNA_template>
            <first_frame> Y  N  *  R  T  N  *  T  L  *  D  I  K  *  M  P  Q  Y  T  F  L  Q  S  R  E  S  D  *  I  *  M  N  T  Y  T  *  S  S  F  W  Y  N  M  P  T  I  R  *  I  S  M  N  T  Y  T  *  S  S  F  W  Y  N  M  P  T  I  R  F  R  R  H  S  Y  S  I  C  R  V  W  G  E  G   </first_frame>
            <second_frame>  T  T  D  V  Q  I  E  L  S  K  I  *  S  E  C  H  N  I  H  F  Y  R  V  G  S  L  T  R  F  K  *  I  R  T  L  E  V  P  F  G  I  I  C  L  Q  *  G  R  F  Q  *  I  R  T  L  E  V  P  F  G  I  I  C  L  Q  *  G  F  V  V  I  L  I  L  F  V  G  F  G  V  R  G  </second_frame>
            <third_frame>   Q  L  T  Y  K  L  N  S  L  R  Y  K  V  N  A  T  I  Y  I  S  T  E  *  G  V  *  L  D  L  N  E  Y  V  H  L  K  F  L  L  V  *  Y  A  Y  N  K  V  D  F  N  E  Y  V  H  L  K  F  L  L  V  *  Y  A  Y  N  K  V  S  S  S  F  L  F  Y  L  *  G  L  G  *  G  E </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0284G15.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="19" PGL_strand="-" PGL_start="87213" PGL_stop="86618"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="87213" e_stop="86618"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.948"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.948">
            <gDNA_exon_boundary e_start="87213" e_stop="86618" e_length="596"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="87213" stop="86618"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E375319" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="87213" stop="86688"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E204434" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="87142" stop="86784"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E240817" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACTGCATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCCTCATGTTCCTTCTTGATCTTTGAGTATACCAATATATCATCAATAAATACGATCACAAATAGATCCAGATATAGCTTAAAAATCCCGTTCATCAAACTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATACCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAGAAGACACAAGCTCCTTGTAACTGATCGAACAAGTCATCAATGCGAGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTTAGTTGTCTGTAGTCTATGCACATTCGAAAAC</gDNA_template>
            <first_frame> E  S  L  D  K  S  A  V  V  A  S  *  P  N  K  A  P  Y  F  *  H  I  S  R  S  Y  P  I  L  H  C  L  N  L  R  R  I  H  H  H  S  I  L  R  N  H  V  P  Q  E  G  H  C  I  *  P  K  L  T  L  R  E  L  G  I  K  L  F  L  P  Q  H  F  Q  Y  H  S  Q  M  L  L  M  F  L  L  D  L  *  V  Y  Q  Y  I  I  N  K  Y  D  H  K  *  I  Q  I  *  L  K  N  P  V  H  Q  T  H  E  R  S  R  G  I  R  K  T  K  R  H  H  Y  K  F  V  I  P  I  P  G  S  K  S  S  L  W  H  I  R  C  P  Y  F  Q  L  M  I  T  G  S  Q  V  N  L  R  E  D  T  S  S  L  *  L  I  E  Q  V  I  N  A  R  K  R  I  L  V  L  Y  G  Y  L  V  *  L  S  V  V  Y  A  H  S  K   </first_frame>
            <second_frame>  N  P  L  T  N  R  R  *  *  L  A  N  P  T  K  L  L  I  S  D  T  L  V  G  L  T  Q  F  F  T  V  S  I  L  E  G  S  T  I  T  P  S  L  E  T  T  C  P  K  K  D  T  A  S  S  Q  N  S  H  L  E  N  L  A  *  S  F  F  S  L  N  I  S  N  T  I  L  K  C  S  S  C  S  F  L  I  F  E  Y  T  N  I  S  S  I  N  T  I  T  N  R  S  R  Y  S  L  K  I  P  F  I  K  L  M  N  A  A  G  A  F  V  R  P  K  D  I  T  T  N  S  *  Y  P  Y  L  V  L  K  A  V  F  G  T  S  V  A  R  I  F  N  *  *  *  P  D  L  K  S  I  L  E  K  T  Q  A  P  C  N  *  S  N  K  S  S  M  R  G  R  G  Y  L  F  F  M  V  T  L  F  S  C  L  *  S  M  H  I  R  K  </second_frame>
            <third_frame>   I  P  *  Q  I  G  G  S  S  *  L  T  Q  Q  S  S  L  F  L  T  H  *  *  V  L  P  N  S  S  L  S  Q  S  *  K  D  P  P  S  L  H  P  *  K  P  R  A  P  R  R  T  L  H  L  A  K  T  H  T  *  R  T  W  H  K  A  F  S  P  S  T  F  P  I  P  F  S  N  A  P  H  V  P  S  *  S  L  S  I  P  I  Y  H  Q  *  I  R  S  Q  I  D  P  D  I  A  *  K  S  R  S  S  N  S  *  T  Q  Q  G  H  S  *  D  Q  K  T  S  L  Q  I  R  N  T  H  T  W  F  *  K  Q  S  L  A  H  P  L  P  V  F  S  I  D  D  N  R  I  S  S  Q  S  *  R  R  H  K  L  L  V  T  D  R  T  S  H  Q  C  E  E  E  D  T  C  S  L  W  L  P  C  L  V  V  C  S  L  C  T  F  E  N </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0284G15.1" strand="-"/>
                <serials PGL_serial="19" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="87017" stop="86820"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SFFSLNISNTILKCSSCSFLIFEYTNISSINTITNRSRYSLKIPFIKLMNAAGAFVRPKDITTNS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="20" PGL_strand="-" PGL_start="89906" PGL_stop="89347"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="89906" e_stop="89347"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.925"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.925">
            <gDNA_exon_boundary e_start="89906" e_stop="89347" e_length="560"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89906" stop="89350"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E396058" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89906" stop="89350"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E396054" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89905" stop="89347"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E231589" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89905" stop="89360"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E241959" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89905" stop="89433"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E236652" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="20" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATCGATTCTCCTTCTCTCTCTTTCTGTTCTTTTCTTTTTCTTATCAAAACCTCTTTCTTTTACCCTAATTAGCATATAATTTAAGAATAAAATATGGCAATAATAACCCACTAATTTACTCAAGGTTACCTCTTTTAACCCCCAAGTAATTAGACTTATTAACATAAACCCACTAACTTTATAATTAAAGTAGGAATAGTCCAAAACGTCCCTTAAAACGTGTAAAGAAATTTGACCTCGCCTGAGATTACGCAGCCTGTGACGGGTCGTCGTGCCTGCGACGGTCCGTCCTGCTGCTCCGTCACAGAGTTCAGAGACTGAAATTCTCTGAAGAGTGTGTGACGGTCCGTCACGCCTGTGACGGTCCGTCCTGCTATTCCGTTACGAAGTTCAGAGAGTCGATTTTCAGTACCCAATTTCAGAATTTCTAAGTGTTTTGAAACGAGACCCCTCGACGGTCCGTCGTGCCCATGACGGTCCGTCGTGGGTTCCGTCGTCTCAGCCTGTTTTTCCAGAAATAAAATCTGCTACTCAAAACGACTAAACAGGTCGTTACAATA</gDNA_template>
            <first_frame> I  D  S  P  S  L  S  F  C  S  F  L  F  L  I  K  T  S  F  F  Y  P  N  *  H  I  I  *  E  *  N  M  A  I  I  T  H  *  F  T  Q  G  Y  L  F  *  P  P  S  N  *  T  Y  *  H  K  P  T  N  F  I  I  K  V  G  I  V  Q  N  V  P  *  N  V  *  R  N  L  T  S  P  E  I  T  Q  P  V  T  G  R  R  A  C  D  G  P  S  C  C  S  V  T  E  F  R  D  *  N  S  L  K  S  V  *  R  S  V  T  P  V  T  V  R  P  A  I  P  L  R  S  S  E  S  R  F  S  V  P  N  F  R  I  S  K  C  F  E  T  R  P  L  D  G  P  S  C  P  *  R  S  V  V  G  S  V  V  S  A  C  F  S  R  N  K  I  C  Y  S  K  R  L  N  R  S  L  Q   </first_frame>
            <second_frame>  S  I  L  L  L  S  L  S  V  L  F  F  F  L  S  K  P  L  S  F  T  L  I  S  I  *  F  K  N  K  I  W  Q  *  *  P  T  N  L  L  K  V  T  S  F  N  P  Q  V  I  R  L  I  N  I  N  P  L  T  L  *  L  K  *  E  *  S  K  T  S  L  K  T  C  K  E  I  *  P  R  L  R  L  R  S  L  *  R  V  V  V  P  A  T  V  R  P  A  A  P  S  Q  S  S  E  T  E  I  L  *  R  V  C  D  G  P  S  R  L  *  R  S  V  L  L  F  R  Y  E  V  Q  R  V  D  F  Q  Y  P  I  S  E  F  L  S  V  L  K  R  D  P  S  T  V  R  R  A  H  D  G  P  S  W  V  P  S  S  Q  P  V  F  P  E  I  K  S  A  T  Q  N  D  *  T  G  R  Y  N  </second_frame>
            <third_frame>   R  F  S  F  S  L  F  L  F  F  S  F  S  Y  Q  N  L  F  L  L  P  *  L  A  Y  N  L  R  I  K  Y  G  N  N  N  P  L  I  Y  S  R  L  P  L  L  T  P  K  *  L  D  L  L  T  *  T  H  *  L  Y  N  *  S  R  N  S  P  K  R  P  L  K  R  V  K  K  F  D  L  A  *  D  Y  A  A  C  D  G  S  S  C  L  R  R  S  V  L  L  L  R  H  R  V  Q  R  L  K  F  S  E  E  C  V  T  V  R  H  A  C  D  G  P  S  C  Y  S  V  T  K  F  R  E  S  I  F  S  T  Q  F  Q  N  F  *  V  F  *  N  E  T  P  R  R  S  V  V  P  M  T  V  R  R  G  F  R  R  L  S  L  F  F  Q  K  *  N  L  L  L  K  T  T  K  Q  V  V  T  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0284G15.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="21" PGL_strand="+" PGL_start="90153" PGL_stop="90671"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="90153" e_stop="90671"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.902"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.902">
            <gDNA_exon_boundary e_start="90153" e_stop="90671" e_length="519"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90153" stop="90671"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E242359" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="21" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CCTAATCTCTTTGTTAATGATGAGACCTTGGCATAAAAGAAGGCTTGATGAACGAAAGTAGTGAGATTAGGGGATCGGGTGCCACGTTCCGGTACCAGGATAGTATATGAGGATCGGAGTGTCACGTTCCGACACCAGGATAGAATATGGATCGGGTGCCACGTTCCGGTACCAGGATAGAATGAGGATCGGAGTGTCACGTTCCGACACCAGGATAGTATATGGATCGGGTGCCACGTTCCGGTACCAGGATAGAATGAGGATCGGAGTGTCACGTTCCGACACCAGGATAGTATATTGAGGAGCGGAGTGTCACGTACCGACACGAGAGGAATAAAGATAATGAATCTTGAAAGATGTTAATATATTCAATCTAATGAACCTAATTCCCAAATGAGTATGATGAGGAGGTGTGAGTCCTCATTGATGAGCTTAGTGTTGTAACCAAGGGTTATGGTAATCGTAAATGCTACATGCTAAGGATATTAGTTGATTTTATGATATTATCTGATATATACT</gDNA_template>
            <first_frame> P  N  L  F  V  N  D  E  T  L  A  *  K  K  A  *  *  T  K  V  V  R  L  G  D  R  V  P  R  S  G  T  R  I  V  Y  E  D  R  S  V  T  F  R  H  Q  D  R  I  W  I  G  C  H  V  P  V  P  G  *  N  E  D  R  S  V  T  F  R  H  Q  D  S  I  W  I  G  C  H  V  P  V  P  G  *  N  E  D  R  S  V  T  F  R  H  Q  D  S  I  L  R  S  G  V  S  R  T  D  T  R  G  I  K  I  M  N  L  E  R  C  *  Y  I  Q  S  N  E  P  N  S  Q  M  S  M  M  R  R  C  E  S  S  L  M  S  L  V  L  *  P  R  V  M  V  I  V  N  A  T  C  *  G  Y  *  L  I  L  *  Y  Y  L  I  Y  T </first_frame>
            <second_frame>  L  I  S  L  L  M  M  R  P  W  H  K  R  R  L  D  E  R  K  *  *  D  *  G  I  G  C  H  V  P  V  P  G  *  Y  M  R  I  G  V  S  R  S  D  T  R  I  E  Y  G  S  G  A  T  F  R  Y  Q  D  R  M  R  I  G  V  S  R  S  D  T  R  I  V  Y  G  S  G  A  T  F  R  Y  Q  D  R  M  R  I  G  V  S  R  S  D  T  R  I  V  Y  *  G  A  E  C  H  V  P  T  R  E  E  *  R  *  *  I  L  K  D  V  N  I  F  N  L  M  N  L  I  P  K  *  V  *  *  G  G  V  S  P  H  *  *  A  *  C  C  N  Q  G  L  W  *  S  *  M  L  H  A  K  D  I  S  *  F  Y  D  I  I  *  Y  I   </second_frame>
            <third_frame>   *  S  L  C  *  *  *  D  L  G  I  K  E  G  L  M  N  E  S  S  E  I  R  G  S  G  A  T  F  R  Y  Q  D  S  I  *  G  S  E  C  H  V  P  T  P  G  *  N  M  D  R  V  P  R  S  G  T  R  I  E  *  G  S  E  C  H  V  P  T  P  G  *  Y  M  D  R  V  P  R  S  G  T  R  I  E  *  G  S  E  C  H  V  P  T  P  G  *  Y  I  E  E  R  S  V  T  Y  R  H  E  R  N  K  D  N  E  S  *  K  M  L  I  Y  S  I  *  *  T  *  F  P  N  E  Y  D  E  E  V  *  V  L  I  D  E  L  S  V  V  T  K  G  Y  G  N  R  K  C  Y  M  L  R  I  L  V  D  F  M  I  L  S  D  I  Y  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0284G15.1" strand="+"/>
                <serials PGL_serial="21" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="90256" stop="90453"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YMRIGVSRSDTRIEYGSGATFRYQDRMRIGVSRSDTRIVYGSGATFRYQDRMRIGVSRSDTRIVY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="22" PGL_strand="+" PGL_start="90814" PGL_stop="91012"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="90814" e_stop="91012"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.925"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.925">
            <gDNA_exon_boundary e_start="90814" e_stop="91012" e_length="199"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90814" stop="91012"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E298638" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="22" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCATTATTCCGGATATCAGGGTGAGCTAATGCTTCTAGCTTGGACTGGATCTTCCTCTTCATGTCTTGATGCCTTGAAGTTCCGGCATGGACTAGCTTTTATGTATTTTTAGCTTCTTAGAAACTCTTAGATTTAGTAATTTGAAGTAGATGTTCTTGTGATGATGACTTCCAGATTTTGGGGAAATAATAGTTATTGA</gDNA_template>
            <first_frame> S  L  F  R  I  S  G  *  A  N  A  S  S  L  D  W  I  F  L  F  M  S  *  C  L  E  V  P  A  W  T  S  F  Y  V  F  L  A  S  *  K  L  L  D  L  V  I  *  S  R  C  S  C  D  D  D  F  Q  I  L  G  K  *  *  L  L  </first_frame>
            <second_frame>  H  Y  S  G  Y  Q  G  E  L  M  L  L  A  W  T  G  S  S  S  S  C  L  D  A  L  K  F  R  H  G  L  A  F  M  Y  F  *  L  L  R  N  S  *  I  *  *  F  E  V  D  V  L  V  M  M  T  S  R  F  W  G  N  N  S  Y  * </second_frame>
            <third_frame>   I  I  P  D  I  R  V  S  *  C  F  *  L  G  L  D  L  P  L  H  V  L  M  P  *  S  S  G  M  D  *  L  L  C  I  F  S  F  L  E  T  L  R  F  S  N  L  K  *  M  F  L  *  *  *  L  P  D  F  G  E  I  I  V  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0284G15.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="23" PGL_strand="+" PGL_start="96139" PGL_stop="100933"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="96139" e_stop="96669"/>
            <exon e_start="97553" e_stop="97664"/>
            <exon e_start="98271" e_stop="98445"/>
            <exon e_start="98642" e_stop="98810"/>
            <exon e_start="98979" e_stop="99203"/>
            <exon e_start="99390" e_stop="99665"/>
            <exon e_start="99983" e_stop="100261"/>
            <exon e_start="100420" e_stop="100933"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.978" e_score="1.000"/>
          <exon-intron don_prob="0.191" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.957" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.911" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.935" acc_prob="0.997" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="96139" e_stop="96669" e_length="531"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.978">
            <gDNA_intron_boundary i_start="96670" i_stop="97552" i_length="883"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="97553" e_stop="97664" e_length="112"/>
          </exon>
          <intron i_serial="2" don_prob="0.191" acc_prob="0.998">
            <gDNA_intron_boundary i_start="97665" i_stop="98270" i_length="606"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="98271" e_stop="98445" e_length="175"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.993">
            <gDNA_intron_boundary i_start="98446" i_stop="98641" i_length="196"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="98642" e_stop="98810" e_length="169"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="0.957">
            <gDNA_intron_boundary i_start="98811" i_stop="98978" i_length="168"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="98979" e_stop="99203" e_length="225"/>
          </exon>
          <intron i_serial="5" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="99204" i_stop="99389" i_length="186"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="99390" e_stop="99665" e_length="276"/>
          </exon>
          <intron i_serial="6" don_prob="0.911" acc_prob="0.995">
            <gDNA_intron_boundary i_start="99666" i_stop="99982" i_length="317"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="99983" e_stop="100261" e_length="279"/>
          </exon>
          <intron i_serial="7" don_prob="0.935" acc_prob="0.997">
            <gDNA_intron_boundary i_start="100262" i_stop="100419" i_length="158"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="100420" e_stop="100933" e_length="514"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="96139" stop="96669"/>
              <exon start="97553" stop="97649"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E542915" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="96140" stop="96669"/>
              <exon start="97553" stop="97590"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E302912" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="96286" stop="96669"/>
              <exon start="97553" stop="97575"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E329185" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="96378" stop="96669"/>
              <exon start="97553" stop="97664"/>
              <exon start="98271" stop="98445"/>
              <exon start="98642" stop="98810"/>
              <exon start="98979" stop="99203"/>
              <exon start="99390" stop="99665"/>
              <exon start="99983" stop="100261"/>
              <exon start="100420" stop="100864"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E746114" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98273" stop="98445"/>
              <exon start="98642" stop="98810"/>
              <exon start="98979" stop="99203"/>
              <exon start="99390" stop="99665"/>
              <exon start="99983" stop="100007"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E727571" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98273" stop="98445"/>
              <exon start="98642" stop="98810"/>
              <exon start="98979" stop="99191"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E726085" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98287" stop="98445"/>
              <exon start="98642" stop="98810"/>
              <exon start="98979" stop="99189"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325177" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98332" stop="98445"/>
              <exon start="98642" stop="98810"/>
              <exon start="98979" stop="99203"/>
              <exon start="99390" stop="99445"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E698362" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98336" stop="98445"/>
              <exon start="98642" stop="98810"/>
              <exon start="98979" stop="99203"/>
              <exon start="99390" stop="99602"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E263109" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98337" stop="98445"/>
              <exon start="98642" stop="98810"/>
              <exon start="98979" stop="99203"/>
              <exon start="99390" stop="99433"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E256181" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98358" stop="98445"/>
              <exon start="98642" stop="98810"/>
              <exon start="98979" stop="99203"/>
              <exon start="99390" stop="99563"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E207981" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98358" stop="98445"/>
              <exon start="98642" stop="98810"/>
              <exon start="98979" stop="99203"/>
              <exon start="99390" stop="99552"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E214511" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99587" stop="99665"/>
              <exon start="99983" stop="100229"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308363" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100065" stop="100261"/>
              <exon start="100420" stop="100784"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E548792" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100102" stop="100261"/>
              <exon start="100420" stop="100762"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351126" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100102" stop="100261"/>
              <exon start="100420" stop="100762"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357285" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100102" stop="100261"/>
              <exon start="100420" stop="100762"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357496" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100102" stop="100261"/>
              <exon start="100420" stop="100762"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357501" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100107" stop="100261"/>
              <exon start="100420" stop="100812"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E555136" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100133" stop="100261"/>
              <exon start="100420" stop="100807"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E350820" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100169" stop="100261"/>
              <exon start="100420" stop="100933"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303930" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="23" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTTTTTTTATTGTCATCCTCGCAATTTTCACCCAAAATCACACGGTCCAATTGGATCCCCAATTTCGGATTGCGATGCTTCTTATAAATACAAACAATTTCTACCATGCTTTCTCCCTCGTTTTCTCCAAACACAAATTTCCTCTATCTGCAGCCTCTCCTCCACCACCCAAATCATCATTTTCTCAGGCCTCTGATTCAATTACAAAGAACAAATTGAAGTTACCTTTGGTTTCTTTGACCAAATCTTTGCCAAATACACAATTTGATCTTATTCAGAGCGAGAAAATGGTGAATTTCATGATGGATAAGTATATTGTTCCCAGTTTTGTTGTTTCTCTATTGGGGTTCCTTCTTCTTTATGTTTTGCGACCAAGAACCCCCAATTATAAGAAAATGGATCTTAAATCTACCCGAAAATGTGAAACCCACAACGTAATTTCTAGAAAATTGGAGAAAGGGACCGATGCCGATGTTATAATTGTTGGAGCTGGGGTTGCTGGTGCTGCTCTTGCTCATACCCTTGCTAAG : GAAGGACGAAATGTTCACGTCATCGAAAGGGATTTGACAGAGCCGGACCGGATTGTTGGCGAATTGCTTCAGCCTGGGGGTTATCTTAAATTGATTGAGTTGGGCATTGAAG : ATTGTGTTGAGGATATTGATGCCCAGCGGGTGGTTGGATATGCTCTTTTCAAGGATGGAAAGAGCACAAATGTTTCCTATCCCTTGAAAAACTTCCATTCGGATGTGGCTGGGAGAAGCTTTCACAATGGGCGCTTCATACAGAAGATGAGAGAAAAAGCAGCTACTCTTCCCAA : TGTACGATTGGAACAAGGCACCGTAACATCCCTGATTGAAGAAAATGGATCCATTAAGGGTGTTCAGTACAAAACTAAGGCTGGCCAAGAACTTAAAGCACATGCTCCTCTTACAGTAGTTTGTGATGGGTGCTTCTCAAACTTGCGACGCTCGCTTTGTGACCCTAAG : GTTGATGTTCCCTCTTGCTTTGTTGGTCTGGTATTGGAATTGGAGAATGATCGACTTCCATACCCAAACCATGGGCATGTTATTCTGGCAGATCCTTCTCCCATCTTATTTTATCCTATCAGTAGCACGGAAATTCGCTGCTTGGTCGATGTACCTGGTCAAAAGCTTCCTTCTCTTGCTAATGGTGATATGGCAAATTATTTGAAAACTATGGTAGCTCCCCAG : GTACCACCTGAGCTACGTGATGCGTTTCTATCTGCAATTGATAAGGGGCATATTAAAACTATGCCAAACAGGAGCATGCCAGCTGCTCCCTATCCTACACCTGGAGCTCTGTTGCTAGGCGATTCTTTCAACATGCGCCATCCATTAACTGGTGGGGGAATGACTGTTGCGCTTTCAGACATTGCAGTATTAAGGAATCTTCTTATGCCATTGCAAGACCTGAATGACGCAGATGAGTTGTGTAAATATCTGGAGTCATTTTATACTTTGCGCAAG : CCAGTGGCTTCCACCATAAATACTTTGGCTGGAGCTCTGTATAAGGTGTTCTGTGCTTCTCCTGATCAAGCGAGGAGGGAGATGCGAGATGCGTGTTTTGACTATTTGAGCCTTGGAGGCACTTGTTCAACTGGACCTGTAGCTCTACTCTCTGGTCTTGATCCTAATCCAATGAGCTTGGTGCTCCATTTCTTTGCAGTGGCCGTTTATGGAGTTGGTCGTTTACTTGTACCTTTTCCTTCTCCAAAGAAGTTGTGGATCGGAGCTAAATTAATATTG : TCTGCATCAGGCATCATATTTCCCATCATAAAGGCAGAAGGGATCCGGCAAATGTTCTTTCCAACAACAATACCAGCATATCACAGAGCTCCTCCCGTGAAGACGGAGTCAGATTAAGCAGAAAATTTGTTGAAGTTTTGTTCCATGAATAGCATTAACATTTTTGCAGTTCCTTTCTCGAAGCACGAAATGTAAGTTCCACTCTCCCCTCACCCCAAACCCTACAAATAGAATAAGAATGACGACGAAACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTGAAATCTACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTTAAATCTAGTCAGACTCCCTACTCTGTAGAAATGTATATTGTGGCATTCACTTTATATCTTAGAGAGTTCAATTTGTACGTCAGTTGTAGCTCTGAGATAGACATCAACGGTTATGTTTCTGTATTGTACATCACATTGATGTATGTATCAG</gDNA_template>
            <first_frame> F  F  F  I  V  I  L  A  I  F  T  Q  N  H  T  V  Q  L  D  P  Q  F  R  I  A  M  L  L  I  N  T  N  N  F  Y  H  A  F  S  L  V  F  S  K  H  K  F  P  L  S  A  A  S  P  P  P  P  K  S  S  F  S  Q  A  S  D  S  I  T  K  N  K  L  K  L  P  L  V  S  L  T  K  S  L  P  N  T  Q  F  D  L  I  Q  S  E  K  M  V  N  F  M  M  D  K  Y  I  V  P  S  F  V  V  S  L  L  G  F  L  L  L  Y  V  L  R  P  R  T  P  N  Y  K  K  M  D  L  K  S  T  R  K  C  E  T  H  N  V  I  S  R  K  L  E  K  G  T  D  A  D  V  I  I  V  G  A  G  V  A  G  A  A  L  A  H  T  L  A  K  :  E  G  R  N  V  H  V  I  E  R  D  L  T  E  P  D  R  I  V  G  E  L  L  Q  P  G  G  Y  L  K  L  I  E  L  G  I  E   : D  C  V  E  D  I  D  A  Q  R  V  V  G  Y  A  L  F  K  D  G  K  S  T  N  V  S  Y  P  L  K  N  F  H  S  D  V  A  G  R  S  F  H  N  G  R  F  I  Q  K  M  R  E  K  A  A  T  L  P  N :   V  R  L  E  Q  G  T  V  T  S  L  I  E  E  N  G  S  I  K  G  V  Q  Y  K  T  K  A  G  Q  E  L  K  A  H  A  P  L  T  V  V  C  D  G  C  F  S  N  L  R  R  S  L  C  D  P  K  :  V  D  V  P  S  C  F  V  G  L  V  L  E  L  E  N  D  R  L  P  Y  P  N  H  G  H  V  I  L  A  D  P  S  P  I  L  F  Y  P  I  S  S  T  E  I  R  C  L  V  D  V  P  G  Q  K  L  P  S  L  A  N  G  D  M  A  N  Y  L  K  T  M  V  A  P  Q  :  V  P  P  E  L  R  D  A  F  L  S  A  I  D  K  G  H  I  K  T  M  P  N  R  S  M  P  A  A  P  Y  P  T  P  G  A  L  L  L  G  D  S  F  N  M  R  H  P  L  T  G  G  G  M  T  V  A  L  S  D  I  A  V  L  R  N  L  L  M  P  L  Q  D  L  N  D  A  D  E  L  C  K  Y  L  E  S  F  Y  T  L  R  K  :  P  V  A  S  T  I  N  T  L  A  G  A  L  Y  K  V  F  C  A  S  P  D  Q  A  R  R  E  M  R  D  A  C  F  D  Y  L  S  L  G  G  T  C  S  T  G  P  V  A  L  L  S  G  L  D  P  N  P  M  S  L  V  L  H  F  F  A  V  A  V  Y  G  V  G  R  L  L  V  P  F  P  S  P  K  K  L  W  I  G  A  K  L  I  L  :  S  A  S  G  I  I  F  P  I  I  K  A  E  G  I  R  Q  M  F  F  P  T  T  I  P  A  Y  H  R  A  P  P  V  K  T  E  S  D  *  A  E  N  L  L  K  F  C  S  M  N  S  I  N  I  F  A  V  P  F  S  K  H  E  M  *  V  P  L  S  P  H  P  K  P  Y  K  *  N  K  N  D  D  E  T  L  L  *  A  Y  Y  T  K  R  N  F  K  C  T  Y  S  L  K  S  T  L  L  *  A  Y  Y  T  K  R  N  F  K  C  T  Y  S  F  K  S  S  Q  T  P  Y  S  V  E  M  Y  I  V  A  F  T  L  Y  L  R  E  F  N  L  Y  V  S  C  S  S  E  I  D  I  N  G  Y  V  S  V  L  Y  I  T  L  M  Y  V  S  </first_frame>
            <second_frame>  F  F  L  L  S  S  S  Q  F  S  P  K  I  T  R  S  N  W  I  P  N  F  G  L  R  C  F  L  *  I  Q  T  I  S  T  M  L  S  P  S  F  S  P  N  T  N  F  L  Y  L  Q  P  L  L  H  H  P  N  H  H  F  L  R  P  L  I  Q  L  Q  R  T  N  *  S  Y  L  W  F  L  *  P  N  L  C  Q  I  H  N  L  I  L  F  R  A  R  K  W  *  I  S  *  W  I  S  I  L  F  P  V  L  L  F  L  Y  W  G  S  F  F  F  M  F  C  D  Q  E  P  P  I  I  R  K  W  I  L  N  L  P  E  N  V  K  P  T  T  *  F  L  E  N  W  R  K  G  P  M  P  M  L  *  L  L  E  L  G  L  L  V  L  L  L  L  I  P  L  L  R :   K  D  E  M  F  T  S  S  K  G  I  *  Q  S  R  T  G  L  L  A  N  C  F  S  L  G  V  I  L  N  *  L  S  W  A  L  K  :  I  V  L  R  I  L  M  P  S  G  W  L  D  M  L  F  S  R  M  E  R  A  Q  M  F  P  I  P  *  K  T  S  I  R  M  W  L  G  E  A  F  T  M  G  A  S  Y  R  R  *  E  K  K  Q  L  L  F  P   : M  Y  D  W  N  K  A  P  *  H  P  *  L  K  K  M  D  P  L  R  V  F  S  T  K  L  R  L  A  K  N  L  K  H  M  L  L  L  Q  *  F  V  M  G  A  S  Q  T  C  D  A  R  F  V  T  L  R :   L  M  F  P  L  A  L  L  V  W  Y  W  N  W  R  M  I  D  F  H  T  Q  T  M  G  M  L  F  W  Q  I  L  L  P  S  Y  F  I  L  S  V  A  R  K  F  A  A  W  S  M  Y  L  V  K  S  F  L  L  L  L  M  V  I  W  Q  I  I  *  K  L  W  *  L  P  R :   Y  H  L  S  Y  V  M  R  F  Y  L  Q  L  I  R  G  I  L  K  L  C  Q  T  G  A  C  Q  L  L  P  I  L  H  L  E  L  C  C  *  A  I  L  S  T  C  A  I  H  *  L  V  G  E  *  L  L  R  F  Q  T  L  Q  Y  *  G  I  F  L  C  H  C  K  T  *  M  T  Q  M  S  C  V  N  I  W  S  H  F  I  L  C  A  S :   Q  W  L  P  P  *  I  L  W  L  E  L  C  I  R  C  S  V  L  L  L  I  K  R  G  G  R  C  E  M  R  V  L  T  I  *  A  L  E  A  L  V  Q  L  D  L  *  L  Y  S  L  V  L  I  L  I  Q  *  A  W  C  S  I  S  L  Q  W  P  F  M  E  L  V  V  Y  L  Y  L  F  L  L  Q  R  S  C  G  S  E  L  N  *  Y  C :   L  H  Q  A  S  Y  F  P  S  *  R  Q  K  G  S  G  K  C  S  F  Q  Q  Q  Y  Q  H  I  T  E  L  L  P  *  R  R  S  Q  I  K  Q  K  I  C  *  S  F  V  P  *  I  A  L  T  F  L  Q  F  L  S  R  S  T  K  C  K  F  H  S  P  L  T  P  N  P  T  N  R  I  R  M  T  T  K  P  Y  C  R  H  I  I  P  K  G  T  S  S  V  R  I  H  *  N  L  P  Y  C  R  H  I  I  P  K  G  T  S  S  V  R  I  H  L  N  L  V  R  L  P  T  L  *  K  C  I  L  W  H  S  L  Y  I  L  E  S  S  I  C  T  S  V  V  A  L  R  *  T  S  T  V  M  F  L  Y  C  T  S  H  *  C  M  Y  Q </second_frame>
            <third_frame>   F  F  Y  C  H  P  R  N  F  H  P  K  S  H  G  P  I  G  S  P  I  S  D  C  D  A  S  Y  K  Y  K  Q  F  L  P  C  F  L  P  R  F  L  Q  T  Q  I  S  S  I  C  S  L  S  S  T  T  Q  I  I  I  F  S  G  L  *  F  N  Y  K  E  Q  I  E  V  T  F  G  F  F  D  Q  I  F  A  K  Y  T  I  *  S  Y  S  E  R  E  N  G  E  F  H  D  G  *  V  Y  C  S  Q  F  C  C  F  S  I  G  V  P  S  S  L  C  F  A  T  K  N  P  Q  L  *  E  N  G  S  *  I  Y  P  K  M  *  N  P  Q  R  N  F  *  K  I  G  E  R  D  R  C  R  C  Y  N  C  W  S  W  G  C  W  C  C  S  C  S  Y  P  C  *   : G  R  T  K  C  S  R  H  R  K  G  F  D  R  A  G  P  D  C  W  R  I  A  S  A  W  G  L  S  *  I  D  *  V  G  H  *  R :   L  C  *  G  Y  *  C  P  A  G  G  W  I  C  S  F  Q  G  W  K  E  H  K  C  F  L  S  L  E  K  L  P  F  G  C  G  W  E  K  L  S  Q  W  A  L  H  T  E  D  E  R  K  S  S  Y  S  S  Q  :  C  T  I  G  T  R  H  R  N  I  P  D  *  R  K  W  I  H  *  G  C  S  V  Q  N  *  G  W  P  R  T  *  S  T  C  S  S  Y  S  S  L  *  W  V  L  L  K  L  A  T  L  A  L  *  P  *   : G  *  C  S  L  L  L  C  W  S  G  I  G  I  G  E  *  S  T  S  I  P  K  P  W  A  C  Y  S  G  R  S  F  S  H  L  I  L  S  Y  Q  *  H  G  N  S  L  L  G  R  C  T  W  S  K  A  S  F  S  C  *  W  *  Y  G  K  L  F  E  N  Y  G  S  S  P   : G  T  T  *  A  T  *  C  V  S  I  C  N  *  *  G  A  Y  *  N  Y  A  K  Q  E  H  A  S  C  S  L  S  Y  T  W  S  S  V  A  R  R  F  F  Q  H  A  P  S  I  N  W  W  G  N  D  C  C  A  F  R  H  C  S  I  K  E  S  S  Y  A  I  A  R  P  E  *  R  R  *  V  V  *  I  S  G  V  I  L  Y  F  A  Q   : A  S  G  F  H  H  K  Y  F  G  W  S  S  V  *  G  V  L  C  F  S  *  S  S  E  E  G  D  A  R  C  V  F  *  L  F  E  P  W  R  H  L  F  N  W  T  C  S  S  T  L  W  S  *  S  *  S  N  E  L  G  A  P  F  L  C  S  G  R  L  W  S  W  S  F  T  C  T  F  S  F  S  K  E  V  V  D  R  S  *  I  N  I   : V  C  I  R  H  H  I  S  H  H  K  G  R  R  D  P  A  N  V  L  S  N  N  N  T  S  I  S  Q  S  S  S  R  E  D  G  V  R  L  S  R  K  F  V  E  V  L  F  H  E  *  H  *  H  F  C  S  S  F  L  E  A  R  N  V  S  S  T  L  P  S  P  Q  T  L  Q  I  E  *  E  *  R  R  N  L  I  V  G  I  L  Y  Q  K  E  L  Q  V  Y  V  F  I  E  I  Y  L  I  V  G  I  L  Y  Q  K  E  L  Q  V  Y  V  F  I  *  I  *  S  D  S  L  L  C  R  N  V  Y  C  G  I  H  F  I  S  *  R  V  Q  F  V  R  Q  L  *  L  *  D  R  H  Q  R  L  C  F  C  I  V  H  H  I  D  V  C  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0284G15.1" strand="+"/>
                <serials PGL_serial="23" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="96139" stop="96669"/>
                    <exon start="97553" stop="97664"/>
                    <exon start="98271" stop="98445"/>
                    <exon start="98642" stop="98810"/>
                    <exon start="98979" stop="99203"/>
                    <exon start="99390" stop="99665"/>
                    <exon start="99983" stop="100261"/>
                    <exon start="100420" stop="100536"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1881</number_coding_nucleotides>
                  <number_encoded_amino_acids>627</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FFFIVILAIFTQNHTVQLDPQFRIAMLLINTNNFYHAFSLVFSKHKFPLSAASPPPPKSSFSQASDSITKNKLKLPLVSLTKSLPNTQFDLIQSEKMVNFMMDKYIVPSFVVSLLGFLLLYVLRPRTPNYKKMDLKSTRKCETHNVISRKLEKGTDADVIIVGAGVAGAALAHTLAKEGRNVHVIERDLTEPDRIVGELLQPGGYLKLIELGIEDCVEDIDAQRVVGYALFKDGKSTNVSYPLKNFHSDVAGRSFHNGRFIQKMREKAATLPNVRLEQGTVTSLIEENGSIKGVQYKTKAGQELKAHAPLTVVCDGCFSNLRRSLCDPKVDVPSCFVGLVLELENDRLPYPNHGHVILADPSPILFYPISSTEIRCLVDVPGQKLPSLANGDMANYLKTMVAPQVPPELRDAFLSAIDKGHIKTMPNRSMPAAPYPTPGALLLGDSFNMRHPLTGGGMTVALSDIAVLRNLLMPLQDLNDADELCKYLESFYTLRKPVASTINTLAGALYKVFCASPDQARREMRDACFDYLSLGGTCSTGPVALLSGLDPNPMSLVLHFFAVAVYGVGRLLVPFPSPKKLWIGAKLILSASGIIFPIIKAEGIRQMFFPTTIPAYHRAPPVKTESD*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0284G15.1" strand="+"/>
                <serials PGL_serial="23" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="100741" stop="100932"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>192</number_coding_nucleotides>
                  <number_encoded_amino_acids>64</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AYYTKRNFKCTYSFKSSQTPYSVEMYIVAFTLYLREFNLYVSCSSEIDINGYVSVLYITLMYVS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="24" PGL_strand="-" PGL_start="100870" PGL_stop="100623"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="100870" e_stop="100623"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.980"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.980">
            <gDNA_exon_boundary e_start="100870" e_stop="100623" e_length="248"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100870" stop="100623"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277554" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="24" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TACAACTGACGTACAAATTGAACTCTCTAAGATATAAAGTGAATGCCACAATATACATTTCTACAGAGTAGGGAGTCTGACTAGATTTAAATGAATACGTACACTTGAAGTTCCTTTTGGTATAATATGCCTACAATAAGGTAGATTTCAATGAATACGTACACTTGAAGTTCCTTTTGGTATAATATGCCTACAATAAGGTTTCGTCGTCATTCTTATTCTATTTGTAGGGTTTGGGGTGAGGGGAG</gDNA_template>
            <first_frame> Y  N  *  R  T  N  *  T  L  *  D  I  K  *  M  P  Q  Y  T  F  L  Q  S  R  E  S  D  *  I  *  M  N  T  Y  T  *  S  S  F  W  Y  N  M  P  T  I  R  *  I  S  M  N  T  Y  T  *  S  S  F  W  Y  N  M  P  T  I  R  F  R  R  H  S  Y  S  I  C  R  V  W  G  E  G   </first_frame>
            <second_frame>  T  T  D  V  Q  I  E  L  S  K  I  *  S  E  C  H  N  I  H  F  Y  R  V  G  S  L  T  R  F  K  *  I  R  T  L  E  V  P  F  G  I  I  C  L  Q  *  G  R  F  Q  *  I  R  T  L  E  V  P  F  G  I  I  C  L  Q  *  G  F  V  V  I  L  I  L  F  V  G  F  G  V  R  G  </second_frame>
            <third_frame>   Q  L  T  Y  K  L  N  S  L  R  Y  K  V  N  A  T  I  Y  I  S  T  E  *  G  V  *  L  D  L  N  E  Y  V  H  L  K  F  L  L  V  *  Y  A  Y  N  K  V  D  F  N  E  Y  V  H  L  K  F  L  L  V  *  Y  A  Y  N  K  V  S  S  S  F  L  F  Y  L  *  G  L  G  *  G  E </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0284G15.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="25" PGL_strand="-" PGL_start="103936" PGL_stop="102117"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="103936" e_stop="103591"/>
            <exon e_start="103487" e_stop="103327"/>
            <exon e_start="103230" e_stop="102117"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.964" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="103936" e_stop="103591" e_length="346"/>
          </exon>
          <intron i_serial="1" don_prob="0.964" acc_prob="0.998">
            <gDNA_intron_boundary i_start="103590" i_stop="103488" i_length="103"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="103487" e_stop="103327" e_length="161"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.998">
            <gDNA_intron_boundary i_start="103326" i_stop="103231" i_length="96"/>
          </intron>
          <exon e_serial="3" e_score="0.999">
            <gDNA_exon_boundary e_start="103230" e_stop="102117" e_length="1114"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103936" stop="103591"/>
              <exon start="103487" stop="103327"/>
              <exon start="103230" stop="102117"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E747246" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="25" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACATAGCAACAATCTTCTCTAAATATTTTCTGCCTCTCAAAACAAACATAAAAAAATTCAAGTGCAAATGAAGCTTTTATCGAAGAAAGCCATGTGTAACTCACATGGACAAGATTCTTCCTACTTTCTAGGATGGGAAGAGTATCAGAAAAACCCATATGATGAAATTCGTAATCCTAAAGGAATCATTCAGATGGGTCTCGCAGAGAATCAGCTCTCTTTCGATTTATTAGAGTCATGGCTTACTCTAAATCCAGATGCATCTGCATTTAAGAGAAATGGCCACTCAATATTTAGAGAGCTTTCCTTATTTCAAGATTACCATGGTCTTCCAGCTTTCAAAGAT : GCATTGGTTCAATTCATGTCTGAAATCAGAGGAAACAAAGTAAGCTTTGATTCAAATAAGCTTGTACTTACAGCTGGTGCTACTTCTGCAAATGAGACACTCATGTTTTGCCTCGCTGATCCTGGCCATGCTTTTCTCCTTCCCACTCCATACTACCCTGG : ATTTGATAGAGACTTAAAATGGAGAACAGGAGCTGAGATTGTTCCAATACAATGCACAAGTTCAAACGGATTTAGAATCACAGAATCAGCTCTTGAAGAAGCTTATACAGAAGCCGAAAGGCGAAACCTTAGAGTGAAAGGGGTTTTAGTCACTAACCCTTCGAATCCATTAGGCACAACATTAACCAAAAAAGAACTCCAACTTCTTCTTACCTTCGTATCTACAAAACAAATCCATCTCATCAGTGATGAGATATATTCTGGCACTGTTTTTAACTCACCTAAATTCGTCAGTGTCATGGAAGTACTAATCGAAAACAACTACATGTACACTGATGTATGGGATAGAGTTCACATAGTCTATAGTCTTTCGAAAGATTTGGGACTTCCAGGATTTCGAGTTGGTGCCATTTATTCCAACGACGATAGGGTCGTCTCTGCAGCCACAAAAATGTCTAGTTTTGGATTAATTTCATCTCAAACTCAATACCTTCTTTCTGCTTTGCTATCAGACAAAAAGTTCACGAAAAATTACGTGTCTGAAAATCAAAAGAGGCTGAAAAAACGACATGAAATGCTAGTTGGTGGTCTTAAACAAATTGGAATAAGGTGCCTTGAGAGCAATGCTGGGTTGTTTTGTTGGGTGGATATGAGACATCTTTTAAGTTCAAACACATTTGATGGAGAAATGGAATTATGGAAGAAAATAGTGTACGAAGTAGGGCTAAATATTTCAGCTGGATCGTCATGCCATTGTACAGAACCGGGTTGGTTTCGTGCATGTTTTGCTAACATGTCAGAAGATACGTTAAATATCGCCATACAACGTTTGAAGGCTTTTGTTGATTCAAGGGTTAATAACAAGGATGATATTCAAAATCAGCAGCAGTGTTCTAATAAGAAGAAGTCATTTTCCAAATGGGTTTTTCGACTATCGTTCAATGAACGTCAAAGAGAACGATAGTCTAGTCATGTGAAAGTTCGTAAATTCATTTTTGTTTTTTTAAATCTCGATAGTTAATTAGATGTTGAGATTTCTAAAAGATTTTGTACCATAATACATACTTTTAAATTGTTTTAATTGTAGAGGGTCACTGTCCATTTGATTGGACGA</gDNA_template>
            <first_frame> T  *  Q  Q  S  S  L  N  I  F  C  L  S  K  Q  T  *  K  N  S  S  A  N  E  A  F  I  E  E  S  H  V  *  L  T  W  T  R  F  F  L  L  S  R  M  G  R  V  S  E  K  P  I  *  *  N  S  *  S  *  R  N  H  S  D  G  S  R  R  E  S  A  L  F  R  F  I  R  V  M  A  Y  S  K  S  R  C  I  C  I  *  E  K  W  P  L  N  I  *  R  A  F  L  I  S  R  L  P  W  S  S  S  F  Q  R   : C  I  G  S  I  H  V  *  N  Q  R  K  Q  S  K  L  *  F  K  *  A  C  T  Y  S  W  C  Y  F  C  K  *  D  T  H  V  L  P  R  *  S  W  P  C  F  S  P  S  H  S  I  L  P  W  :  I  *  *  R  L  K  M  E  N  R  S  *  D  C  S  N  T  M  H  K  F  K  R  I  *  N  H  R  I  S  S  *  R  S  L  Y  R  S  R  K  A  K  P  *  S  E  R  G  F  S  H  *  P  F  E  S  I  R  H  N  I  N  Q  K  R  T  P  T  S  S  Y  L  R  I  Y  K  T  N  P  S  H  Q  *  *  D  I  F  W  H  C  F  *  L  T  *  I  R  Q  C  H  G  S  T  N  R  K  Q  L  H  V  H  *  C  M  G  *  S  S  H  S  L  *  S  F  E  R  F  G  T  S  R  I  S  S  W  C  H  L  F  Q  R  R  *  G  R  L  C  S  H  K  N  V  *  F  W  I  N  F  I  S  N  S  I  P  S  F  C  F  A  I  R  Q  K  V  H  E  K  L  R  V  *  K  S  K  E  A  E  K  T  T  *  N  A  S  W  W  S  *  T  N  W  N  K  V  P  *  E  Q  C  W  V  V  L  L  G  G  Y  E  T  S  F  K  F  K  H  I  *  W  R  N  G  I  M  E  E  N  S  V  R  S  R  A  K  Y  F  S  W  I  V  M  P  L  Y  R  T  G  L  V  S  C  M  F  C  *  H  V  R  R  Y  V  K  Y  R  H  T  T  F  E  G  F  C  *  F  K  G  *  *  Q  G  *  Y  S  K  S  A  A  V  F  *  *  E  E  V  I  F  Q  M  G  F  S  T  I  V  Q  *  T  S  K  R  T  I  V  *  S  C  E  S  S  *  I  H  F  C  F  F  K  S  R  *  L  I  R  C  *  D  F  *  K  I  L  Y  H  N  T  Y  F  *  I  V  L  I  V  E  G  H  C  P  F  D  W  T  </first_frame>
            <second_frame>  H  S  N  N  L  L  *  I  F  S  A  S  Q  N  K  H  K  K  I  Q  V  Q  M  K  L  L  S  K  K  A  M  C  N  S  H  G  Q  D  S  S  Y  F  L  G  W  E  E  Y  Q  K  N  P  Y  D  E  I  R  N  P  K  G  I  I  Q  M  G  L  A  E  N  Q  L  S  F  D  L  L  E  S  W  L  T  L  N  P  D  A  S  A  F  K  R  N  G  H  S  I  F  R  E  L  S  L  F  Q  D  Y  H  G  L  P  A  F  K  D  :  A  L  V  Q  F  M  S  E  I  R  G  N  K  V  S  F  D  S  N  K  L  V  L  T  A  G  A  T  S  A  N  E  T  L  M  F  C  L  A  D  P  G  H  A  F  L  L  P  T  P  Y  Y  P  G :   F  D  R  D  L  K  W  R  T  G  A  E  I  V  P  I  Q  C  T  S  S  N  G  F  R  I  T  E  S  A  L  E  E  A  Y  T  E  A  E  R  R  N  L  R  V  K  G  V  L  V  T  N  P  S  N  P  L  G  T  T  L  T  K  K  E  L  Q  L  L  L  T  F  V  S  T  K  Q  I  H  L  I  S  D  E  I  Y  S  G  T  V  F  N  S  P  K  F  V  S  V  M  E  V  L  I  E  N  N  Y  M  Y  T  D  V  W  D  R  V  H  I  V  Y  S  L  S  K  D  L  G  L  P  G  F  R  V  G  A  I  Y  S  N  D  D  R  V  V  S  A  A  T  K  M  S  S  F  G  L  I  S  S  Q  T  Q  Y  L  L  S  A  L  L  S  D  K  K  F  T  K  N  Y  V  S  E  N  Q  K  R  L  K  K  R  H  E  M  L  V  G  G  L  K  Q  I  G  I  R  C  L  E  S  N  A  G  L  F  C  W  V  D  M  R  H  L  L  S  S  N  T  F  D  G  E  M  E  L  W  K  K  I  V  Y  E  V  G  L  N  I  S  A  G  S  S  C  H  C  T  E  P  G  W  F  R  A  C  F  A  N  M  S  E  D  T  L  N  I  A  I  Q  R  L  K  A  F  V  D  S  R  V  N  N  K  D  D  I  Q  N  Q  Q  Q  C  S  N  K  K  K  S  F  S  K  W  V  F  R  L  S  F  N  E  R  Q  R  E  R  *  S  S  H  V  K  V  R  K  F  I  F  V  F  L  N  L  D  S  *  L  D  V  E  I  S  K  R  F  C  T  I  I  H  T  F  K  L  F  *  L  *  R  V  T  V  H  L  I  G  R </second_frame>
            <third_frame>   I  A  T  I  F  S  K  Y  F  L  P  L  K  T  N  I  K  K  F  K  C  K  *  S  F  Y  R  R  K  P  C  V  T  H  M  D  K  I  L  P  T  F  *  D  G  K  S  I  R  K  T  H  M  M  K  F  V  I  L  K  E  S  F  R  W  V  S  Q  R  I  S  S  L  S  I  Y  *  S  H  G  L  L  *  I  Q  M  H  L  H  L  R  E  M  A  T  Q  Y  L  E  S  F  P  Y  F  K  I  T  M  V  F  Q  L  S  K  M :   H  W  F  N  S  C  L  K  S  E  E  T  K  *  A  L  I  Q  I  S  L  Y  L  Q  L  V  L  L  L  Q  M  R  H  S  C  F  A  S  L  I  L  A  M  L  F  S  F  P  L  H  T  T  L   : D  L  I  E  T  *  N  G  E  Q  E  L  R  L  F  Q  Y  N  A  Q  V  Q  T  D  L  E  S  Q  N  Q  L  L  K  K  L  I  Q  K  P  K  G  E  T  L  E  *  K  G  F  *  S  L  T  L  R  I  H  *  A  Q  H  *  P  K  K  N  S  N  F  F  L  P  S  Y  L  Q  N  K  S  I  S  S  V  M  R  Y  I  L  A  L  F  L  T  H  L  N  S  S  V  S  W  K  Y  *  S  K  T  T  T  C  T  L  M  Y  G  I  E  F  T  *  S  I  V  F  R  K  I  W  D  F  Q  D  F  E  L  V  P  F  I  P  T  T  I  G  S  S  L  Q  P  Q  K  C  L  V  L  D  *  F  H  L  K  L  N  T  F  F  L  L  C  Y  Q  T  K  S  S  R  K  I  T  C  L  K  I  K  R  G  *  K  N  D  M  K  C  *  L  V  V  L  N  K  L  E  *  G  A  L  R  A  M  L  G  C  F  V  G  W  I  *  D  I  F  *  V  Q  T  H  L  M  E  K  W  N  Y  G  R  K  *  C  T  K  *  G  *  I  F  Q  L  D  R  H  A  I  V  Q  N  R  V  G  F  V  H  V  L  L  T  C  Q  K  I  R  *  I  S  P  Y  N  V  *  R  L  L  L  I  Q  G  L  I  T  R  M  I  F  K  I  S  S  S  V  L  I  R  R  S  H  F  P  N  G  F  F  D  Y  R  S  M  N  V  K  E  N  D  S  L  V  M  *  K  F  V  N  S  F  L  F  F  *  I  S  I  V  N  *  M  L  R  F  L  K  D  F  V  P  *  Y  I  L  L  N  C  F  N  C  R  G  S  L  S  I  *  L  D   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0284G15.1" strand="-"/>
                <serials PGL_serial="25" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="103914" stop="103591"/>
                    <exon start="103487" stop="103327"/>
                    <exon start="103230" stop="102267"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1446</number_coding_nucleotides>
                  <number_encoded_amino_acids>482</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IFSASQNKHKKIQVQMKLLSKKAMCNSHGQDSSYFLGWEEYQKNPYDEIRNPKGIIQMGLAENQLSFDLLESWLTLNPDASAFKRNGHSIFRELSLFQDYHGLPAFKDALVQFMSEIRGNKVSFDSNKLVLTAGATSANETLMFCLADPGHAFLLPTPYYPGFDRDLKWRTGAEIVPIQCTSSNGFRITESALEEAYTEAERRNLRVKGVLVTNPSNPLGTTLTKKELQLLLTFVSTKQIHLISDEIYSGTVFNSPKFVSVMEVLIENNYMYTDVWDRVHIVYSLSKDLGLPGFRVGAIYSNDDRVVSAATKMSSFGLISSQTQYLLSALLSDKKFTKNYVSENQKRLKKRHEMLVGGLKQIGIRCLESNAGLFCWVDMRHLLSSNTFDGEMELWKKIVYEVGLNISAGSSCHCTEPGWFRACFANMSEDTLNIAIQRLKAFVDSRVNNKDDIQNQQQCSNKKKSFSKWVFRLSFNERQRER*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="26" PGL_strand="+" PGL_start="110257" PGL_stop="111949"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="110257" e_stop="110602"/>
            <exon e_start="110706" e_stop="110866"/>
            <exon e_start="110963" e_stop="111949"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.964" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="110257" e_stop="110602" e_length="346"/>
          </exon>
          <intron i_serial="1" don_prob="0.964" acc_prob="0.998">
            <gDNA_intron_boundary i_start="110603" i_stop="110705" i_length="103"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="110706" e_stop="110866" e_length="161"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.998">
            <gDNA_intron_boundary i_start="110867" i_stop="110962" i_length="96"/>
          </intron>
          <exon e_serial="3" e_score="0.995">
            <gDNA_exon_boundary e_start="110963" e_stop="111949" e_length="987"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="110257" stop="110602"/>
              <exon start="110706" stop="110866"/>
              <exon start="110963" stop="111949"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E747246" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="26" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACATAGCAACAATCTTCTCTAAATATTTTCTGCCTCTCAAAACAAACATAAAAAAATTCAAGTGCAAATGAAGCTTTTATCGAAGAAAGCCATGTGTAACTCACATGGACAAGATTCTTCCTACTTTCTAGGATGGGAAGAGTATCAGAAAAACCCATATGATGAAATTCGTAATCCTAAAGGAATCATTCAGATGGGTCTCGCAGAGAATCAGCTCTCTTTCGATTTATTAGAGTCATGGCTTACTCTAAATCCAGATGCATCTGCATTTAAGAGAAATGGCCACTCAATATTTAGAGAGCTTTCCTTATTTCAAGATTACCATGGTCTTCCAGCTTTCAAAGAT : GCATTGGTTCAATTCATGTCTGAAATCAGAGGAAACAAAGTAAGCTTTGATTCAAATAAGCTTGTACTTACAGCTGGTGCTACTTCTGCAAATGAGACACTCATGTTTTGCCTCGCTGATCCTGGCCATGCTTTTCTCCTTCCCACTCCATACTACCCTGG : ATTTGATAGAGACTTAAAATGGAGAACAGGAGCTGAGATTGTTCCAATACAATGCACAAGTTCAAACGGATTTAGAATCACAGAATCAGCTCTTGAAGAAGCTTATACAGAAGCCGAAAGGCGAAACCTTAGAGTGAAAGGGGTTTTAGTCACTAACCCTTCGAATCCATTAGGCACAACATTAACCAAAAAAGAACTCCAACTTCTTCTTACCTTCGTATCTACAAAACAAATCCATCTCATCAGTGATGAGATATATTCTGGCACTGTTTTTAACTCACCTAAATTCGTCAGTGTCATGGAAGTACTAATCGAAAACAACTACATGTACACTGATGTATGGGATAGAGTTCACATAGTCTATAGTCTTTCGAAAGATTTGGGACTTCCAGGATTTCGAGTTGGTGCCATTTATTCCAACGACGATAGGGTCGTCTCTGCAGCCACAAAAATGTCTAGTTTTGGATTAATTTCATCTCAAACTCAATACCTTCTTTCTGCTTTGCTATCAGACAAAAAGTTCACGAAAAATTACGTGTCTGAAAATCAAAAGAGGCTGAAAAAACGACATGAAATGCTAGTTGGTGGTCTTAAACAAATTGGAATAAGGTGCCTTGAGAGCAATGCTGGGTTGTTTTGTTGGGTGGATATGAGACATCTTTTAAGTTCAAACACATTTGATGGAGAAATGGAATTATGGAAGAAAATAGTGTACGAAGTAGGGCTAAATATTTCAGCTGGATCGTCATGCCATTGTACAGAACCGGGTTGGTTTCGTGCATGTTTTGCTAACATGTCAGAAGATACGTTAAATATCGCCATACAACGTTTGAAGGCTTTTGTTGATTCAAGGGTTAATAACAAGGATGATATTCAAAATCAGCAGCAGTGTTCTAATAAGAAGAAGTCATTTTCCAAATGGGTTTTTCGACTATCGTTCAATGAACGTCAAAGAGAACGATAGTCTAGACATACGAAAGTTACTAA</gDNA_template>
            <first_frame> T  *  Q  Q  S  S  L  N  I  F  C  L  S  K  Q  T  *  K  N  S  S  A  N  E  A  F  I  E  E  S  H  V  *  L  T  W  T  R  F  F  L  L  S  R  M  G  R  V  S  E  K  P  I  *  *  N  S  *  S  *  R  N  H  S  D  G  S  R  R  E  S  A  L  F  R  F  I  R  V  M  A  Y  S  K  S  R  C  I  C  I  *  E  K  W  P  L  N  I  *  R  A  F  L  I  S  R  L  P  W  S  S  S  F  Q  R   : C  I  G  S  I  H  V  *  N  Q  R  K  Q  S  K  L  *  F  K  *  A  C  T  Y  S  W  C  Y  F  C  K  *  D  T  H  V  L  P  R  *  S  W  P  C  F  S  P  S  H  S  I  L  P  W  :  I  *  *  R  L  K  M  E  N  R  S  *  D  C  S  N  T  M  H  K  F  K  R  I  *  N  H  R  I  S  S  *  R  S  L  Y  R  S  R  K  A  K  P  *  S  E  R  G  F  S  H  *  P  F  E  S  I  R  H  N  I  N  Q  K  R  T  P  T  S  S  Y  L  R  I  Y  K  T  N  P  S  H  Q  *  *  D  I  F  W  H  C  F  *  L  T  *  I  R  Q  C  H  G  S  T  N  R  K  Q  L  H  V  H  *  C  M  G  *  S  S  H  S  L  *  S  F  E  R  F  G  T  S  R  I  S  S  W  C  H  L  F  Q  R  R  *  G  R  L  C  S  H  K  N  V  *  F  W  I  N  F  I  S  N  S  I  P  S  F  C  F  A  I  R  Q  K  V  H  E  K  L  R  V  *  K  S  K  E  A  E  K  T  T  *  N  A  S  W  W  S  *  T  N  W  N  K  V  P  *  E  Q  C  W  V  V  L  L  G  G  Y  E  T  S  F  K  F  K  H  I  *  W  R  N  G  I  M  E  E  N  S  V  R  S  R  A  K  Y  F  S  W  I  V  M  P  L  Y  R  T  G  L  V  S  C  M  F  C  *  H  V  R  R  Y  V  K  Y  R  H  T  T  F  E  G  F  C  *  F  K  G  *  *  Q  G  *  Y  S  K  S  A  A  V  F  *  *  E  E  V  I  F  Q  M  G  F  S  T  I  V  Q  *  T  S  K  R  T  I  V  *  T  Y  E  S  Y  * </first_frame>
            <second_frame>  H  S  N  N  L  L  *  I  F  S  A  S  Q  N  K  H  K  K  I  Q  V  Q  M  K  L  L  S  K  K  A  M  C  N  S  H  G  Q  D  S  S  Y  F  L  G  W  E  E  Y  Q  K  N  P  Y  D  E  I  R  N  P  K  G  I  I  Q  M  G  L  A  E  N  Q  L  S  F  D  L  L  E  S  W  L  T  L  N  P  D  A  S  A  F  K  R  N  G  H  S  I  F  R  E  L  S  L  F  Q  D  Y  H  G  L  P  A  F  K  D  :  A  L  V  Q  F  M  S  E  I  R  G  N  K  V  S  F  D  S  N  K  L  V  L  T  A  G  A  T  S  A  N  E  T  L  M  F  C  L  A  D  P  G  H  A  F  L  L  P  T  P  Y  Y  P  G :   F  D  R  D  L  K  W  R  T  G  A  E  I  V  P  I  Q  C  T  S  S  N  G  F  R  I  T  E  S  A  L  E  E  A  Y  T  E  A  E  R  R  N  L  R  V  K  G  V  L  V  T  N  P  S  N  P  L  G  T  T  L  T  K  K  E  L  Q  L  L  L  T  F  V  S  T  K  Q  I  H  L  I  S  D  E  I  Y  S  G  T  V  F  N  S  P  K  F  V  S  V  M  E  V  L  I  E  N  N  Y  M  Y  T  D  V  W  D  R  V  H  I  V  Y  S  L  S  K  D  L  G  L  P  G  F  R  V  G  A  I  Y  S  N  D  D  R  V  V  S  A  A  T  K  M  S  S  F  G  L  I  S  S  Q  T  Q  Y  L  L  S  A  L  L  S  D  K  K  F  T  K  N  Y  V  S  E  N  Q  K  R  L  K  K  R  H  E  M  L  V  G  G  L  K  Q  I  G  I  R  C  L  E  S  N  A  G  L  F  C  W  V  D  M  R  H  L  L  S  S  N  T  F  D  G  E  M  E  L  W  K  K  I  V  Y  E  V  G  L  N  I  S  A  G  S  S  C  H  C  T  E  P  G  W  F  R  A  C  F  A  N  M  S  E  D  T  L  N  I  A  I  Q  R  L  K  A  F  V  D  S  R  V  N  N  K  D  D  I  Q  N  Q  Q  Q  C  S  N  K  K  K  S  F  S  K  W  V  F  R  L  S  F  N  E  R  Q  R  E  R  *  S  R  H  T  K  V  T   </second_frame>
            <third_frame>   I  A  T  I  F  S  K  Y  F  L  P  L  K  T  N  I  K  K  F  K  C  K  *  S  F  Y  R  R  K  P  C  V  T  H  M  D  K  I  L  P  T  F  *  D  G  K  S  I  R  K  T  H  M  M  K  F  V  I  L  K  E  S  F  R  W  V  S  Q  R  I  S  S  L  S  I  Y  *  S  H  G  L  L  *  I  Q  M  H  L  H  L  R  E  M  A  T  Q  Y  L  E  S  F  P  Y  F  K  I  T  M  V  F  Q  L  S  K  M :   H  W  F  N  S  C  L  K  S  E  E  T  K  *  A  L  I  Q  I  S  L  Y  L  Q  L  V  L  L  L  Q  M  R  H  S  C  F  A  S  L  I  L  A  M  L  F  S  F  P  L  H  T  T  L   : D  L  I  E  T  *  N  G  E  Q  E  L  R  L  F  Q  Y  N  A  Q  V  Q  T  D  L  E  S  Q  N  Q  L  L  K  K  L  I  Q  K  P  K  G  E  T  L  E  *  K  G  F  *  S  L  T  L  R  I  H  *  A  Q  H  *  P  K  K  N  S  N  F  F  L  P  S  Y  L  Q  N  K  S  I  S  S  V  M  R  Y  I  L  A  L  F  L  T  H  L  N  S  S  V  S  W  K  Y  *  S  K  T  T  T  C  T  L  M  Y  G  I  E  F  T  *  S  I  V  F  R  K  I  W  D  F  Q  D  F  E  L  V  P  F  I  P  T  T  I  G  S  S  L  Q  P  Q  K  C  L  V  L  D  *  F  H  L  K  L  N  T  F  F  L  L  C  Y  Q  T  K  S  S  R  K  I  T  C  L  K  I  K  R  G  *  K  N  D  M  K  C  *  L  V  V  L  N  K  L  E  *  G  A  L  R  A  M  L  G  C  F  V  G  W  I  *  D  I  F  *  V  Q  T  H  L  M  E  K  W  N  Y  G  R  K  *  C  T  K  *  G  *  I  F  Q  L  D  R  H  A  I  V  Q  N  R  V  G  F  V  H  V  L  L  T  C  Q  K  I  R  *  I  S  P  Y  N  V  *  R  L  L  L  I  Q  G  L  I  T  R  M  I  F  K  I  S  S  S  V  L  I  R  R  S  H  F  P  N  G  F  F  D  Y  R  S  M  N  V  K  E  N  D  S  L  D  I  R  K  L  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0284G15.1" strand="+"/>
                <serials PGL_serial="26" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="110279" stop="110602"/>
                    <exon start="110706" stop="110866"/>
                    <exon start="110963" stop="111926"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1446</number_coding_nucleotides>
                  <number_encoded_amino_acids>482</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IFSASQNKHKKIQVQMKLLSKKAMCNSHGQDSSYFLGWEEYQKNPYDEIRNPKGIIQMGLAENQLSFDLLESWLTLNPDASAFKRNGHSIFRELSLFQDYHGLPAFKDALVQFMSEIRGNKVSFDSNKLVLTAGATSANETLMFCLADPGHAFLLPTPYYPGFDRDLKWRTGAEIVPIQCTSSNGFRITESALEEAYTEAERRNLRVKGVLVTNPSNPLGTTLTKKELQLLLTFVSTKQIHLISDEIYSGTVFNSPKFVSVMEVLIENNYMYTDVWDRVHIVYSLSKDLGLPGFRVGAIYSNDDRVVSAATKMSSFGLISSQTQYLLSALLSDKKFTKNYVSENQKRLKKRHEMLVGGLKQIGIRCLESNAGLFCWVDMRHLLSSNTFDGEMELWKKIVYEVGLNISAGSSCHCTEPGWFRACFANMSEDTLNIAIQRLKAFVDSRVNNKDDIQNQQQCSNKKKSFSKWVFRLSFNERQRER*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="27" PGL_strand="-" PGL_start="125322" PGL_stop="124092"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="125322" e_stop="124980"/>
            <exon e_start="124104" e_stop="124092"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.772" e_score="0.994"/>
          <exon-only e_score="0.692"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="125322" e_stop="124980" e_length="343"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.772">
            <gDNA_intron_boundary i_start="124979" i_stop="124105" i_length="875"/>
          </intron>
          <exon e_serial="2" e_score="0.692">
            <gDNA_exon_boundary e_start="124104" e_stop="124092" e_length="13"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125322" stop="124980"/>
              <exon start="124104" stop="124092"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E396504" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125322" stop="124989"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E398401" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125321" stop="125001"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E247190" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125270" stop="124980"/>
              <exon start="124104" stop="124092"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E391664" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="27" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CCGGCGCTGCCCAAAACTCAGCCAAGCCTCCTCACCTATACGGCTCCTTTACTAATCCCTCAGCAGCTTGTTAATTAATTAGTACAGTATGCAAATCGTCTTGTTGAATTTATTTTTAATTAATGTCTTGTTGATTAACTAGATTCTTAGGAAATCTCCCAAAACTTATTAAGATTTTTATTTTTTTTAATTTGTACTATAATGAAATGACTTGTATAGTTCATTTGTTAATTAGAGATTTCCTAATCATTAATCAATATTCTATTTACTCATTTGTTTCTTTAATTTGTCGCAGTGCAGCTATGTAAATTGTTAAGAAATATATTTATTTTTGGTAATCTAT : ATTAAAAAAAGAT</gDNA_template>
            <first_frame> P  A  L  P  K  T  Q  P  S  L  L  T  Y  T  A  P  L  L  I  P  Q  Q  L  V  N  *  L  V  Q  Y  A  N  R  L  V  E  F  I  F  N  *  C  L  V  D  *  L  D  S  *  E  I  S  Q  N  L  L  R  F  L  F  F  L  I  C  T  I  M  K  *  L  V  *  F  I  C  *  L  E  I  S  *  S  L  I  N  I  L  F  T  H  L  F  L  *  F  V  A  V  Q  L  C  K  L  L  R  N  I  F  I  F  G  N  L   : Y  *  K  K   </first_frame>
            <second_frame>  R  R  C  P  K  L  S  Q  A  S  S  P  I  R  L  L  Y  *  S  L  S  S  L  L  I  N  *  Y  S  M  Q  I  V  L  L  N  L  F  L  I  N  V  L  L  I  N  *  I  L  R  K  S  P  K  T  Y  *  D  F  Y  F  F  *  F  V  L  *  *  N  D  L  Y  S  S  F  V  N  *  R  F  P  N  H  *  S  I  F  Y  L  L  I  C  F  F  N  L  S  Q  C  S  Y  V  N  C  *  E  I  Y  L  F  L  V  I  Y  :  I  K  K  R  </second_frame>
            <third_frame>   G  A  A  Q  N  S  A  K  P  P  H  L  Y  G  S  F  T  N  P  S  A  A  C  *  L  I  S  T  V  C  K  S  S  C  *  I  Y  F  *  L  M  S  C  *  L  T  R  F  L  G  N  L  P  K  L  I  K  I  F  I  F  F  N  L  Y  Y  N  E  M  T  C  I  V  H  L  L  I  R  D  F  L  I  I  N  Q  Y  S  I  Y  S  F  V  S  L  I  C  R  S  A  A  M  *  I  V  K  K  Y  I  Y  F  W  *  S  I :   L  K  K  D </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0284G15.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 277 chains have been computed
$ 
$ memory statistics:
$ 1272952 bytes spliced alignments in total
$ 119 spliced alignments have been stored
$ 10697 bytes was the average size of a spliced alignment
$ 37608 bytes predicted gene locations in total
$ 27 predicted gene locations have been stored
$ 1392 bytes was the average size of a predicted gene location
$ 1 megabytes was the average size of the backtrace matrix
$ 299 backtrace matrices have been allocated
$ 
$ date finished: 2009-12-01 10:23:12
-->
