<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-12-01 10:22:58"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U598503" ref_strand="+" ref_description="SGN-U598503 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157341266|emb|CAO49173.1| (e_value=3e-71) unnamed; (*ATH) AT3G02110.1 (e_value=9e-73) | Symbol: SCPL25 | serine carboxypeptidase S10 family protein, similar to serine carboxypeptidase II (CP-MII) GB:CAA70815 (SP:P08818) (Hordeum vulgare) | chr3:370777-373729 REVERSE | Aliases: F1C9.10, F1C9_10, SCPL25; (*SWP) sp|Q8L9Y0|SCP25_ARATH (e_value=8e-72) Serine carboxypeptidase-like 25 OS=Arabidopsis thaliana GN=SCPL25; ">
      <seq>gcttgcacggagaagtatgcagaaatttactacaacaggcctgatgtgcagaaagctatgcacgcgaatacaacaagaattccttataaatggacagcctgcagtgagacattgaatcgaaactggaatgatacagatgactcgattctcccaatctaccaggaactaattgctgctggattgagaatttgggttttcagtggtgatgtagactcagttgtacccgttaccgcgacaaggtattccctagcacagctcaagttatctaccacaactccatggtatccttggtatgtcaaaaaacaggttgggggctggacagaggtatacaaaggtctaacatttgcaacagtgagaggggcaggtcatgaagtgccattattcaagccaagggcagcttatcaactatttagatcatttttaaaaggagagccacttccaaagtcatgattgttgtgacattataaattatactattattagtattatgtatgcttcaaaaatgtcaattgtttctactcttaggctaagaattaaagagttgccaagttgaaagaaaagaattgtttcaacttttaaaagagaattgatggaaaaagggagattacaataggactttgggttggggaaaaaaaaaggtatcaatttgttgtaacaatattaggtaggtgtggtttgaagtctacctcacgtgttttaggaaaatgaattttctttatatttcgtatttcaataaaaagggattagaattcttatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="-" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="4821" stop="3232"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4522" g_stop="4419" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="104" r_length="104" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="4418" i_stop="4350" i_length="69">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="4349" g_stop="4254" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="105" r_stop="200" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="4253" i_stop="4179" i_length="75">
            <donor d_prob="0.869" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="4178" g_stop="4073" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="201" r_stop="306" r_length="106" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="4072" i_stop="3983" i_length="90">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="3982" g_stop="3532" g_length="451"/>
          <reference_exon_boundary r_type="cDNA" r_start="307" r_stop="757" r_length="451" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="-" ref_id="SGN-U598503" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>757</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U598503" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4522" e_stop="4419"/>
          <exon e_start="4349" e_stop="4254"/>
          <exon e_start="4178" e_stop="4073"/>
          <exon e_start="3982" e_stop="3532"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTTGCACGGAGAAGTATGCAGAAATTTACTACAACAGGCCTGATGTGCAGAAAGCTATGCACGCGAATACAACAAGAATTCCTTATAAATGGACAGCCTGCAGGTAAATAATTTGTCTTCCAAACTCCCACTATGTTGATTGATCTTACAACTGATTGATATATGTTTACAGTGAGACATTGAATCGAAACTGGAATGATACAGATGACTCGATTCTCCCAATCTACCAGGAACTAATTGCTGCTGGATTGAGAATTTGGGTTTTCAGGTATGTGACATTGAGTTGAAAACATTTTCCCAAAATTCCAGGGCAACTCCATTTGATCATTTTTTTGTTTTGCAGTGGTGATGTAGACTCAGTTGTACCCGTTACCGCGACAAGGTATTCCCTAGCACAGCTCAAGTTATCTACCACAACTCCATGGTATCCTTGGTATGTCAAAAAACAGGTGAGTAATGTAAAAAAAAAACGAATTCTAGTTTTCCATGATCACTTATATTGATTAACAACTTAATTATTATGTTATGGTTATTGTAAGGTTGGGGGCTGGACAGAGGTATACAAAGGTCTAACATTTGCAACAGTGAGAGGGGCAGGTCATGAAGTGCCATTATTCAAGCCAAGGGCAGCTTATCAACTATTTAGATCATTTTTAAAAGGAGAGCCACTTCCAAAGTCATGATTGTTGTGACATTATAAATTATACTATTATTAGTATTATGTATGCTTCAAAAATGTCAATTGTTTCTACTCTTAGGCTAAGAATTAAAGAGTTGCCAAGTTGAAAGAAAAGAATTGTTTCAACTTTTAAAAGAGAATTGATGGAAAAAGGGAGATTACAATAGGACTTTGGGTTGGGGAAAAAAAAAGGTATCAATTTGTTGTAACAATATTAGGTAGGTGTGGTTTGAAGTCTACCTCACGTGTTTTAGGAAAATGAATTTTCTTTATATTTCGTATTTCAATAAAAAGGGATTAGAATTCTTATT</genome_strand>
        <mrna_strand>GCTTGCACGGAGAAGTATGCAGAAATTTACTACAACAGGCCTGATGTGCAGAAAGCTATGCACGCGAATACAACAAGAATTCCTTATAAATGGACAGCCTGCAG.....................................................................TGAGACATTGAATCGAAACTGGAATGATACAGATGACTCGATTCTCCCAATCTACCAGGAACTAATTGCTGCTGGATTGAGAATTTGGGTTTTCAG...........................................................................TGGTGATGTAGACTCAGTTGTACCCGTTACCGCGACAAGGTATTCCCTAGCACAGCTCAAGTTATCTACCACAACTCCATGGTATCCTTGGTATGTCAAAAAACAG..........................................................................................GTTGGGGGCTGGACAGAGGTATACAAAGGTCTAACATTTGCAACAGTGAGAGGGGCAGGTCATGAAGTGCCATTATTCAAGCCAAGGGCAGCTTATCAACTATTTAGATCATTTTTAAAAGGAGAGCCACTTCCAAAGTCATGATTGTTGTGACATTATAAATTATACTATTATTAGTATTATGTATGCTTCAAAAATGTCAATTGTTTCTACTCTTAGGCTAAGAATTAAAGAGTTGCCAAGTTGAAAGAAAAGAATTGTTTCAACTTTTAAAAGAGAATTGATGGAAAAAGGGAGATTACAATAGGACTTTGGGTTGGGGAAAAAAAAAGGTATCAATTTGTTGTAACAATATTAGGTAGGTGTGGTTTGAAGTCTACCTCACGTGTTTTAGGAAAATGAATTTTCTTTATATTTCGTATTTCAATAAAAAGGGATTAGAATTCTTATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U578088" ref_strand="+" ref_description="SGN-U578088 Tomato 200607#2 [4 ESTs aligned] (*GB) gi|157341266|emb|CAO49173.1| (e_value=4e-83) unnamed; (*ATH) AT3G02110.1 (e_value=2e-79) | Symbol: SCPL25 | serine carboxypeptidase S10 family protein, similar to serine carboxypeptidase II (CP-MII) GB:CAA70815 (SP:P08818) (Hordeum vulgare) | chr3:370777-373729 REVERSE | Aliases: F1C9.10, F1C9_10, SCPL25; (*SWP) sp|Q8L9Y0|SCP25_ARATH (e_value=1e-78) Serine carboxypeptidase-like 25 OS=Arabidopsis thaliana GN=SCPL25; ">
      <seq>aatttctctctcctatttattggaggctcagcggccattaacataacactcccgcccttgatgacctatatcatcacctcattgctattcacacacaaatagcaaatttctttatttctttcagtttctcaacaacaataatatggccaaacgaagattagctttgcttttgattttagcaacaattgtatgtgtgagtgctgcaaagttaaacaaatatcaggatgaagaagacgctgatagaataatatcgctgcctggacaacccaaagtttcgttccatcagtactcagggtatgtcactgtcaatcagtttgctggaagagctctattttactggcttactgaagctattgatgaaccacttactaagcctttggttatttggcttaatggaggtccaggatgctcttcagtggcctatggtgcatctgaagaaatagggccattcaggataaacaagacggcttcgggactgtatttgaataagttttcatggaacaaattggcaaatttactattccttgaaactccagcaggggttggattttcctacagcaataggtcctctgatctccttgacaccggggatattcgcactgctaaggactcacttcagttccttatccactggatgaatcggttcccacgctacagaaatcgtgaagtctacatcacaggggagagctatgctggtcattatgtccctcagctagccagagaaatagttcattacaatggcaact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="-" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="9216" stop="4741"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8916" g_stop="8519" g_length="398"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="398" r_length="398" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="8518" i_stop="6492" i_length="2027">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="6491" g_stop="6288" g_length="204"/>
          <reference_exon_boundary r_type="cDNA" r_start="399" r_stop="602" r_length="204" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="6287" i_stop="5185" i_length="1103">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="5184" g_stop="5041" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="603" r_stop="746" r_length="144" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="-" ref_id="SGN-U578088" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>746</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U578088" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8916" e_stop="8519"/>
          <exon e_start="6491" e_stop="6288"/>
          <exon e_start="5184" e_stop="5041"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTTCTCTCTCCTATTTATTGGAGGCTCAGCGGCCATTAACATAACACTCCCGCCCTTGATGACCTATATCATCACCTCATTGCTATTCACACACAAATAGCAAATTTCTTTATTTCTTTCAGTTTCTCAACAACAATAATATGGCCAAACGAAGATTAGCTTTGCTTTTGATTTTAGCAACAATTGTATGTGTGAGTGCTGCAAAGTTAAACAAATATCAGGATGAAGAAGACGCTGATAGAATAATATCGCTGCCTGGACAACCCAAAGTTTCGTTCCATCAGTACTCAGGGTATGTCACTGTCAATCAGTTTGCTGGAAGAGCTCTATTTTACTGGCTTACTGAAGCTATTGATGAACCACTTACTAAGCCTTTGGTTATTTGGCTTAATGGAGGTCAGATCTCTCTTAAATTTCTACGTGAAAAGTTCCTTTCTATTTTTTTCTATGTTTGATTTTACTTGTTATATTTCATTTTTAGTGTATGATCGATCGTTAATTTTGATGAAAAAGTAAAAATGGAGGAGATAATAACTATTTTTGGCGCATACGCCCCGTATCCTCAAGGTCTAATGTCTGACACATACATAACTTCTTCGGGAAATGGAACACTAATTATGATTACGTGAACTTCTGGTTACTGTTCTATTCATCCTTCCTTTTCTTCTTTTTCCTGTGACTAAAAAGGACTTAAAAGAAAAGGTTTCTATTTCTTTTAACTATATGTTTCTGTTTAAAACAGCGATTATTCAATTTAGTTGGATTTTAATATGAAACTGAGATCGAGAGAAAAGTCTCACTCGTTATTGATTATGTGTTTTGACTCATACATACATTATGTGTTGTGCATTTAAAAGTCATTTTGTCGGTTAATTATTGAGGGTTTTTAGCTTAGGTATTTGATAGTTGAGTACTGGGAAAGGGGGGGCCGTTTAGTTTAGTCATGACTAAACTGTCGACTGATATGGTTCATTATCCATGAACAGATAAGACATTATCTTTGCCAGTTGCTATTTCTCTCTCTCTCTCTCTTCACATTAATATTTGCACGCAGTGAAAATCAATGCTGTTACAACCAACTCCTCATTTAATTTTTCAACTTCATTTCGTGCCCAGACTGGTCTAACATAGATGCCCACACCAATTACGCTTCCGCAACCACCTTCCCCATGTCAGCTACCTAACAGCCTCCTTAAAAACATATTCGAATTTTAAATTTCATAAGTTCAATCATTACCTCTCAAAACTATTGAATTCAGTTGAACTGTGTGATGCATTGGTTATGGGCATGATGCTCTTCGCACAGGACATAGGTTGGATCTTAATGACGAAGCCAATGATTTAAATAAGGGGATTGGATTCACAGAGTAATATAATTTTTATCTTTTTAAGTGTAAAATTATAGGTATTGAGCCTCACGCCCCCGAAATTTAGCCTGAAGGGAGAAGGATTACCAAGTTTTAAATGAGGTCATCCATGTGAGCCTTTTTAATTCGTTAACATATATTTCACGCCTAATGCTGGGCATCTGGTACAAAATTCGAGGCCCAACATCGAGTAAAATAAGTCATACTCTCTGCTACTTATAAAATTATGTATAGTACGTATTCATATTCCAAAAAAAGATTATACTAGCCTTATAAAGAGGTCCCATCTCATGTATAACTTTTTCATTCTTTTAAGGCAAGGATACTTTAACTAATGGATTTGAACAATTTTAATACATGCAAATAGATAATAGTAATATTTTATACCCTTATTTTCATCACTATTATAGTAATATTTCAACAAAGGAGTTCCGTTGCATCCCTGCCCCTGACCTCAGAAATAAGGTGTCTTCAAATGAGAATAGGAAAGATTCTTTACCGTGAATTATGTTGATAACATTAAATTGTAGCCAACTAAACTTAGTACTGTTTGGGATCTGTCGTCATTTTCTTATAAATGAGGTTTTAATTTCTTGACCATATTGTTCATTATTAGATACATGTGCTCATCTCAACTGTATGTGATAAAGGAGCTAGACACACTCTTCTGCGGGGACCCCTTATATTTTTTTAGTCCTAGTAATTTCTGCTACTACTTCAGATTTCTGGACTGACACTCTGATAAAAATTTTAACCATAGGTGAATTCAAGATGTACATGTGACGTCTTTAAACTTTAAAGTTTTCAATATTTAATTCATTCTACATTTGAAATTCTTCTAATGTAGCTAACCAACTGAGTTACTAAAAAATCATTACTTTAGAGCACCAAAAGCTTGGAATGACGAGAAACTTGAACTCATAAGTTTTAAATTTTAGTTCCGTCTCTGCTTTGTAATAAGCATGATCTACTGAAAAAACTGGATGATATAAATTGTTATAGATAATATTGTGCGGATTGTGTAAAAAACTGAGTAATTTATATTGGGAAAAACAGGTCCAGGATGCTCTTCAGTGGCCTATGGTGCATCTGAAGAAATAGGGCCATTCAGGATAAACAAGACGGCTTCGGGACTGTATTTGAATAAGTTTTCATGGAACAAATTGGCAAATTTACTATTCCTTGAAACTCCAGCAGGGGTTGGATTTTCCTACAGCAATAGGTCCTCTGATCTCCTTGACACCGGGGATATTCGCACTGGTACGAACATATTGTTGACTTTGATTAAGCCCTCTCTTTTATCTTGTTGCTAATTAAATTATTTTTTTTCTTAGCTTAGAAATGTCTCAAATCTGAAGACTGATTGACCATGGATTTGTAGTCATATTTGGGGTGCTTATTCTAACTCCTAATGTAGTAAACATGAAAGTGATGGATGCATACCTGCCCCTGAGTAAACGTGACAAATGAACAAGGTTTTTGGATTTAAATGGGTTAATTAATATATCATAACGCAATTCGCTCAATGTGTGACCCGACCTTCTCTCTTTTTCCCTGTTTGGATGGACTTATTTTAAGTGATTTTATGTTTAAATAGCGTTTAACCATTTTTTGTACAGTTTGTGAAAATTCAGGAAAGTATTCTTAAGCTGAATAATTACAAGTTAGTATTTTTAACTTATGACTTATATGCAATAGCCGTTTTTTGCTTATAAGTCATAAGCTATAAGTCTATCCAACCAGTTACATTAATCAAGTCAACGATTACGACTGGATCATAATGCAATCCATTTAAACTTGAACGGATGGAACATGTTAGTAAAACAAATTAATCATATTTGCTTGCTTATTCTCTAATAACTACTAATCTAGTATAAAACTGAAGTGATGGTGGCATGCTTGCTCATGACTTTTCCTCTGTGTAATCAATTGTGTCAAAAGTGCCCATTTTAGGAGCACATGAGAAAGTGCATTTTAGCACTCAATTGCAATGTGGCCTACTTTATGATTTTTGGAGTCAATGCTGCAAGTGTTAGCTACCTTACATGTTGCTATCTGGAGTCAATTTTACTATCACCACTATAGTACTATTCAATCAATCAAACAGCTAAATATTCGCCACTGAAACGAAAATCTTCTCCAAGTAATTGATTTGACTTAATCGTTGAAATATATTATGCGACTTGAGTGCTTGATCATATTAGTACTCTGTTCTGTCTTGTCCTATCGATTTGGAAAAACCTTATCCGCACCTGTTTTTTGCACTAACTTTGTTAATTTATTGTAGTTAAGTGATTAATTCATATGGGTATATACATGATTAATTTGAATGAGATGCTGACTCTTTTGTGTATTTTTATCAGCTAAGGACTCACTTCAGTTCCTTATCCACTGGATGAATCGGTTCCCACGCTACAGAAATCGTGAAGTCTACATCACAGGGGAGAGCTATGCTGGTCATTATGTCCCTCAGCTAGCCAGAGAAATAGTTCATTACAATGCCAACT</genome_strand>
        <mrna_strand>AATTTCTCTCTCCTATTTATTGGAGGCTCAGCGGCCATTAACATAACACTCCCGCCCTTGATGACCTATATCATCACCTCATTGCTATTCACACACAAATAGCAAATTTCTTTATTTCTTTCAGTTTCTCAACAACAATAATATGGCCAAACGAAGATTAGCTTTGCTTTTGATTTTAGCAACAATTGTATGTGTGAGTGCTGCAAAGTTAAACAAATATCAGGATGAAGAAGACGCTGATAGAATAATATCGCTGCCTGGACAACCCAAAGTTTCGTTCCATCAGTACTCAGGGTATGTCACTGTCAATCAGTTTGCTGGAAGAGCTCTATTTTACTGGCTTACTGAAGCTATTGATGAACCACTTACTAAGCCTTTGGTTATTTGGCTTAATGGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCAGGATGCTCTTCAGTGGCCTATGGTGCATCTGAAGAAATAGGGCCATTCAGGATAAACAAGACGGCTTCGGGACTGTATTTGAATAAGTTTTCATGGAACAAATTGGCAAATTTACTATTCCTTGAAACTCCAGCAGGGGTTGGATTTTCCTACAGCAATAGGTCCTCTGATCTCCTTGACACCGGGGATATTCGCACTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAAGGACTCACTTCAGTTCCTTATCCACTGGATGAATCGGTTCCCACGCTACAGAAATCGTGAAGTCTACATCACAGGGGAGAGCTATGCTGGTCATTATGTCCCTCAGCTAGCCAGAGAAATAGTTCATTACAATGGCAACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U591120" ref_strand="+" ref_description="SGN-U591120 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>cttattgtagatgaccaattttttcttcgaatacgaaattaaattacaatacacacaaaaaaaatatttgaattttttttatttaaactaaggaatgaaagaaaaaaacaaaataagaataagaaactcaaattattataataaaagaagtcaaaaaataatttttgtatgaaaaaattaaaatataccttgaactttgatagaagaatcatatatatccctaaatattttttttaaaaaaaaattagaagtaacaaatataaatttaaaactaattttttaactttcgttaaatgaagggtatatgtgagccattttctaacggcaggggtatatgtgagccgtttgtataacgataagggcatatatgaaccacttttattacgagggatatatcagctctaaatgacaaagttgagaggtatatcagacccttttccctattttttaaaatttcatac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="-" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="18373" stop="17316"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18073" g_stop="17653" g_length="421"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="421" r_length="421" r_score="0.907"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="-" ref_id="SGN-U591120" ref_strand="+">
        <total_alignment_score>0.907</total_alignment_score>
        <cumulative_length_of_scored_exons>421</cumulative_length_of_scored_exons>
        <coverage percentage="0.913" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U591120" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18073" e_stop="17653"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTATTGTAGATGACCAATTTTTTTCTTCAAATACGAAATTAAATTACAATACACACAAAAAAATAGTTTAAATTTTTTTTCTTTAAACTAAGGAATGAAAAAGAAAAAACAGAATAAGAATAAGAAACTCAAATAATTATAATAAAAGAAGTCAAAAAATAATTTATGTATGAAAAAAATTAAAATATACCTTAAACTTTGATAGAAGAATCATATATACCCCTAAATAATTTTTTT--TAAAAAA-TAGAAGTAATAAATATAAATTTTAAACTATTTTTTTAACTTCCGTAAAATGAAGGGTATATGTGAGCCATTTTGTAACGGCAGGGGTATATGTGAGTCGTTTGTATAACGGTAAGGGCATATATGAGCAACTTTTATAACGAGAGGTATATCAGCTCGAAATGACAAAGTTAAGGG</genome_strand>
        <mrna_strand>CTTATTGTAGATGACCAA-TTTTTTCTTCGAATACGAAATTAAATTACAATACACACAAAAAAAATATTTGAATTTTTTTTATTTAAACTAAGGAATGAAAGA-AAAAAACAAAATAAGAATAAGAAACTCAAATTATTATAATAAAAGAAGTCAAAAAATAATTTTTGTATG-AAAAAATTAAAATATACCTTGAACTTTGATAGAAGAATCATATATATCCCTAAATATTTTTTTTAAAAAAAAATTAGAAGTAACAAATATAAATTTAAAACTAATTTTTTAACTTTCGTTAAATGAAGGGTATATGTGAGCCATTTTCTAACGGCAGGGGTATATGTGAGCCGTTTGTATAACGATAAGGGCATATATGAACCACTTTTATTACGAGGGATATATCAGCTCTAAATGACAAAGTTGAGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U597467" ref_strand="+" ref_description="SGN-U597467 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>ccaataaactttgtgattgcagaatgatttataaaagtgaaatctacatgaaaacaagttctacatgatccctacaagacttggtaggtcaagtctggtgaacgatataaaaataacaatactgttaccccttttctacatgaatgaatgtaaaaataagcataaacccccaataatagtagtcacaataaatcaacaattcaaagtgactcctgaagctgtaaaccttgtcgatttttggagggtggcaacaatgtgctcgactttctacttctaccaatcaaaagcctcttcgaaattggagacatcatttgatcagttgggcttgtgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="-" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="19702" stop="18772"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19402" g_stop="19072" g_length="331"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="331" r_length="331" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="-" ref_id="SGN-U597467" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>331</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U597467" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19402" e_stop="19072"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAATAAACTTTGTGATTGCAGAATGATTTATAAAAGTGAAATCTACATGAAAACAAGTTCTACATGATCCCTACAAGACTTGGTAGGTCAAGTCTGGTGAACGATATAGAAATAACAATACTGTTACCCCTTTTCTACATGAATGAATGTAAAAATAAGCATAAACCCCCAATAATAGTAGTCACAATAAATCAACAATTCAAAGTGACTCCTGAAGCTGTAAACCTTGTCGATTTTTGGAGGGTGGCAACAATGTGCTCGACTTTCTACTTCTACCAATCAAAAGCCTCTTCGAAACTGGAGACATCATTTGATCAGTTGGACTTGTGT</genome_strand>
        <mrna_strand>CCAATAAACTTTGTGATTGCAGAATGATTTATAAAAGTGAAATCTACATGAAAACAAGTTCTACATGATCCCTACAAGACTTGGTAGGTCAAGTCTGGTGAACGATATAAAAATAACAATACTGTTACCCCTTTTCTACATGAATGAATGTAAAAATAAGCATAAACCCCCAATAATAGTAGTCACAATAAATCAACAATTCAAAGTGACTCCTGAAGCTGTAAACCTTGTCGATTTTTGGAGGGTGGCAACAATGTGCTCGACTTTCTACTTCTACCAATCAAAAGCCTCTTCGAAATTGGAGACATCATTTGATCAGTTGGGCTTGTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U597179" ref_strand="+" ref_description="SGN-U597179 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>ggaaactaaaatggagagtcctcgtatgcaagaaaagatcattgaatcggagaatcatgaaaataacatcaaagtaaagaagacatctaatgtcgatgaagttcaacattctccctcagcgctcaacaagtcagatgaatttctacattctgcctcaacgctcaacaagtcagatggtaaagcagtttctcagtttgaggcaagttatgcttcctcgccccgactctccaatgagagtggaaacagcagcagctcctttgcttttccattactactaaacgatgctgggaaaactggctcactcaaagctccctctgcgaaaatggagagacctcaacctcaacctcagcctcagcatcagccgcagccacaaacacaaccacaaccacaaccacaacccaagtatgaaccagattcagaaccagaaatgcagccacaatcacccgcacaatcacagtcatacacgaagtcagagtcaaaacaagcagagtcactgcctaaactgggag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="22980" stop="24457"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23279" g_stop="23548" g_length="270"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="270" r_length="270" r_score="0.985"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23549" i_stop="23912" i_length="364">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="23913" g_stop="24157" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="271" r_stop="509" r_length="239" r_score="0.931"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-U597179" ref_strand="+">
        <total_alignment_score>0.959</total_alignment_score>
        <cumulative_length_of_scored_exons>515</cumulative_length_of_scored_exons>
        <coverage percentage="1.012" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U597179" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23279" e_stop="23548"/>
          <exon e_start="23913" e_stop="24157"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAACTAAAATGGAGAGTCCTCGTATGCAAGAAAAGATCATTGAATCGGAGAATCATGAAAATAACATCAAAGTAAACAAGACATCTAATGTCGATGAAGTTCAACATTCTCCCTCAGCGCTCAACAAGTCAGATGAATTACTACATTCTGCCTCAACGCTCAACAAGTCAGATGGTAAAGCAGTTTCTCAGTTTGAGGCAAGTTATGCTTCCTCGCCCCGCCTCTCCAATGAGAGTGGAAACAGCAGCAGCTCCTTTGCTTTTCCATTGTAAGATCTCCTTTTCACAACTACCATATACAATGCACTATGTTTTCCCTTTCTTTTTGTTCTGGTTTGCTTTTCCACTCGTGGGATTACACTGGATATGTTGTATGCACAAGTTAATCTCTTTCATGATCCATGCGTTTACTTGCTTGATCATTCATGCGTTTACAAGGTATAAGGGTTAACATTCCTCGTTTTGTGAATGGAGTGTCGATGAGAGAAGCAAAATATCAAATAACACAAGCTAGTAGTTTTAGTTAGTATCTATCTTCTTCTTGTTTTTCTCGGGTGAAGTCTGTTGTGCTGCTAGTTTGTTCCATGCATGATTACACTTGGATTGTTTATAATCGCTTTTGGTTTGTTGCAGACTACTAAACGATGCTGGGAAAACTGGCTCACTCAAAGCTCCCTCTGCGAAAATGGAGAGACCTCAACCTCAGCCTCAGCATCAGCATCAGCCACAGCCACATCCACATCCACAGCCACAACCACAACCACAACCCAAGTATGAACCAGATTCAGAACCACAAATGCAGCCACAATCACCGCAACAATCAGAGTCATACACGAAATCAGAGTCAAAACAAGCAGAGTCACTGCCAAAACTGGGAG</genome_strand>
        <mrna_strand>GGAAACTAAAATGGAGAGTCCTCGTATGCAAGAAAAGATCATTGAATCGGAGAATCATGAAAATAACATCAAAGTAAAGAAGACATCTAATGTCGATGAAGTTCAACATTCTCCCTCAGCGCTCAACAAGTCAGATGAATTTCTACATTCTGCCTCAACGCTCAACAAGTCAGATGGTAAAGCAGTTTCTCAGTTTGAGGCAAGTTATGCTTCCTCGCCCCGACTCTCCAATGAGAGTGGAAACAGCAGCAGCTCCTTTGCTTTTCCATT............................................................................................................................................................................................................................................................................................................................................................................ACTACTAAACGATGCTGGGAAAACTGGCTCACTCAAAGCTCCCTCTGCGAAAATGGAGAGACCTCAACCTCAACCTCAGCCTCAGCATCAGCCGCAGCCACA---A-A--CACAACCACAACCACAACCACAACCCAAGTATGAACCAGATTCAGAACCAGAAATGCAGCCACAATCACCCGCACAATCACAGTCATACACGAAGTCAGAGTCAAAACAAGCAGAGTCACTGCCTAAACTGGGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U583426" ref_strand="+" ref_description="SGN-U583426 Tomato 200607#2 [6 ESTs aligned] (*GB) gi|157346969|emb|CAO17351.1| (e_value=6e-66) unnamed; (*ATH) AT3G62200.1 (e_value=1e-62) | Symbol: None | expressed protein, contains Pfam profile PF04396: Protein of unknown function, DUF537 | chr3:23034412-23036707 REVERSE | Aliases: T17J13.160; ">
      <seq>ggttgttacaaatcaggttaatggcagcagagtgagagagaaccctcgcggcgttatagtcgatggccggagacaaattgaaggcgggtcttcctggcggaaaagcggcggaaccgcagtaccaggcggcgaaaacatcggtgtggtgggatatagagaattgtcaggtgcccaggggatgcgacgctcatgcaattgctcagaatataaacgctgcattgatgaagatgaactataatggaccagtcgctatttccgcctatggagacacaaatcgtattccctcgtacattcaacgagccctttctagtactggaatcagtctcaatcacgtcccggccggggctaaggatgctagtgataagaaaatattggtggatatgctattttgggcagtggacaatcctgcacctgccaattatttgctcatttcaggagacagggatttctccaatgccattcatcagttacggatgaggagatataatattcttctagcacagccttttaaggcttctcctgctcttgctgctgctgccacaaatgtgtggcaatggataagccttgctgctggagaatctccacgagaacttacttttggtactaacacatcacatcaagaatctataccgactccagtttatgaacctatatcagcaaaccaacctgcatattctaatgccaataccaatatcaataccaacgccaataatgccaatgccaactccaactccaacgccaaagccaaatccaaagccaatgccaatgccaatgccaacgccaatatcaataccaatatcaataccagtgccaacgccaatatcaataccaatagcaatgccaatgccaatgccaatgccaataccaataccacaaccaatgctaatgctaatactaaaactaaagttatttacgtaccaaagaactcaaatcaactgactatgaccggtaggtcaagtatgccagctagaattgaagaaactagtagcagctatcgcccacacgcaccagctgttgcaccagtgcagtttgcaccacatatatttttcgcaaagtctgatagttcagagaaccataacagtaaattcatagaaaacaagcctgctcagcgtactcaatctcagcctcctcttgttcgagataactttgtgaagaaattcaacttccgccagaagaatttgcaaccttcgcttcaacgacctgaaggtaggggtgatttatgtggttctatgaacaagggtgatgtatgtcctgagttttccttccttccatcctcatcgggtgcttctaaatctgtctctggtaattcaaatttggaactccagctgcctgaactcattcaaggtcttataggggtcatccttctttcgttggacagtttgaagctcgagaagattgtgcctaccaaagaaaacatcggttattgtctacgttatggtaaccctaaatatcgtcatattgatgtcacagtagcattaaatgctgcactagagcaacagatgatagtaaagttaaaacaagctgatattgaactatatgttggtagaaatgagaggatttggaaatgtgagaatccacttggtggcaatcctaaccaatatcacaatgcaacttggaacgtgattgagaaatttctttgttcaactgttggacgttcagcaatagcagcatctgaatgcaggtatgaagctgctttgattcttagaaatgcatgccttaaagaccttacattgggtgaagtacttcaaatcctgaatatgattatcactctgaagcgttggattaaaactcgctctgattggcatcagattactattactcttccagaaactaataatgacaatgataccagaacatgcatctagccgacagatctcttttggtattttagcatgtcatagccgtgacatgttttcagaaatggatttgatatcttgggagttacagattttaaaagaagctcaattttgtataagatggtatgttcagtgcttacttgatgacggcataggagcgagatcttttttacttttgtggacctctttccaagacacttgcagctgatataagtgtgcagctaaagggatgtgattgttatcatgcttctatcaaccttgctatgctgatggatctcgtaatcttacatttacagcagcatcgtttctgctatcttcactttctttatcttaaaatttccttttcgctggaaattttgtttgcatcagcaagtctactactgctttcacattacttggatttggggcatccaggaatatgcagattgtattttggttaccttggtgagttgagaactggccagaagcacaaaggttttgggttgcaggttgacaggaatattttgtagtcactgttcttctagccagaatataaataatgaaaagtggtttagaacagatccagtaaccttgttttttaagctttatcaaatggaatatgtagatttacttcaccagcgtttttgataacgttctccttttgcctattctttttgtttcttggaacttatgactgtaaatcacttctgcagataagattatatgtagctttaattggag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="-" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="28214" stop="24290"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="27915" g_stop="27574" g_length="342"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="342" r_length="342" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27573" i_stop="27087" i_length="487">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="27086" g_stop="26223" g_length="864"/>
          <reference_exon_boundary r_type="cDNA" r_start="343" r_stop="1206" r_length="864" r_score="0.999"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26222" i_stop="26032" i_length="191">
            <donor d_prob="0.616" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="26031" g_stop="25557" g_length="475"/>
          <reference_exon_boundary r_type="cDNA" r_start="1207" r_stop="1681" r_length="475" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="25556" i_stop="25486" i_length="71">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="25485" g_stop="24593" g_length="893"/>
          <reference_exon_boundary r_type="cDNA" r_start="1682" r_stop="2574" r_length="893" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="-" ref_id="SGN-U583426" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>2574</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U583426" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="27915" e_stop="27574"/>
          <exon e_start="27086" e_stop="26223"/>
          <exon e_start="26031" e_stop="25557"/>
          <exon e_start="25485" e_stop="24593"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTTGTTACAAATCAGGTTAATGGCAGCAGAGTGAGAGAGAACCCTCGCGGCGTTATAGTCGATGGCCGGAGACAAATTGAAGGCGGGTCTTCCTGGCGGAAAAGCGGCGGAACCGCAGTACCAGGCGGCGAAAACATCGGTGTGGTGGGATATAGAGAATTGTCAGGTGCCCAGGGGATGCGACGCTCATGCAATTGCTCAGAATATAAACGCTGCATTGATGAAGATGAACTATAATGGACCAGTCGCTATTTCCGCCTATGGAGACACAAATCGTATTCCCTCGTACATTCAACGAGCCCTTTCTAGTACTGGAATCAGTCTCAATCACGTCCCGGCCGGTACACTAGCAAACCTTCTTCTATTTCCTTTTAACGTTTTAATCTTGTTTTTCATTGTTCAAAATAATTTTCTCAGAGTATAGAGAGGATTTTCAAAGGTTTCTCCCCCCTCCTCTAAGAAATTTAATGGCTGGCCCTAACAGCTTAATCTTGTTTTTCTTTGAAACCTTTGTTGAAAGTGATTTTCTTGAGCAATGGGGGTTTATTAGAAATTTAGTAGCTAGCCTAACAGCTTAATCTTGCTTGGGATTGGTAATTGGTAATTGTTGATGACATTTTCATTATTCGAATTTGAAACAGTTCATCCCATAAGAGTTCTTGGTTTCCAAAATAAATGAATATCAACTTCTAATTCCTTCTTCATATAGTTTTTATGTTTTAGGTTTTGGAAGATATAATATTCATGAACCTATTAATAACTCTTACTTAATGGAAACTTTTATCTTTTACTAATTAAATTCATGCATTTAATTTGTTTGATTTACAGGGGCTAAGGATGCTAGTGATAAGAAAATATTGGTGGATATGCTATTTTGGGCAGTGGACAATCCTGCACCTGCCAATTATTTGCTCATTTCAGGAGACAGGGATTTCTCCAATGCCATTCATCAGTTACGGATGAGGAGATATAATATTCTTCTAGCACAGCCTTTTAAGGCTTCTCCTGCTCTTGCTGCTGCTGCCACAAATGTGTGGCAATGGATAAGCCTTGCTGCTGGAGAATCTCCACGAGAACTTACTTTTGGTACTAACACATTACATCAAGAATCTATACCGACTCCAGTTTATGAACCTATATCAGCAAACCAACCTGCATATTCTAATGCCAATACCAATATCAATACCAACGCCAATAATGCCAATGCCAACTCCAACTCCAACGCCAAAGCCAAATCCAAAGCCAATGCCAATGCCAATGCCAACGCCAATATCAATACCAATATCAATACCAGTGCCAACGCCAATATCAATACCAATAGCAATGCCAATGCCAATGCCAATGCCAATACCAATACCACAACCAATGCTAATGCTAATACTAAAACTAAAGTTATTTACGTACCAAAGAACTCAAATCAACTGACTATGACCGGTAGGTCAAGTATGCCAGCTAGAATTGAAGAAACTAGTAGCAGCTATCGCCCACACGCACCAGCTGTTGCACCAGTGCAGTTTGCACCACATATATTTTTCGCAAAGTCTGATAGTTCAGAGAACCATAACAGTAAATTCATAGAAAACAAGCCTGCTCAGCGTACTCAATCTCAGCCTCCTCTTGTTCGAGATAACTTTGTGAAGAAATTCAACTTCCGCCAGAAGAATTTGCAACCTTCGCTTCAACGACCTGAAGGTTCTGCTGATTTTTCTACACTATTTGTACATCATCCTAATCCTGGCATGCATAATTTGTCTGATAGACCCATAAACTTGTATTACACTCCTAATTTGGATTGACAAAATTGGGAAGTATTGTGACCGAAGCTGAAGTTCACTAAGTCATATAATTTTCTTGTGACACTAATGGTGGTAGTTGTATTGCAGGTAGGGGTGATTTATGTGGTTCTATGAACAAGGGTGATGTATGTCCTGAGTTTTCCTTCCTTCCATCCTCATCGGGTGCTTCTAAATCTGTCTCTGGTAATTCAAATTTGGAACTCCAGCTGCCTGAACTCATTCAAGGTCTTATAGGGGTCATCCTTCTTTCGTTGGACAGTTTGAAGCTCGAGAAGATTGTGCCTACCAAAGAAAACATCGGTTATTGTCTACGTTATGGTAACCCTAAATATCGTCATATTGATGTCACAGTAGCATTAAATGCTGCACTAGAGCAACAGATGATAGTAAAGTTAAAACAAGCTGATATTGAACTATATGTTGGTAGAAATGAGAGGATTTGGAAATGTGAGAATCCACTTGGTGGCAATCCTAACCAATATCACAATGCAACTTGGAACGTGATTGAGAAATTTCTTTGTTCAACTGTTGGACGTTCAGCAATAGCAGCATCTGAATGCAGGTAAACAATTTGTGCTGCATGTTTTTTAATTATATTCTGTTTTTTTTCCTCATGTTCTGTCTGCCTTCCAGGTATGAAGCTGCTTTGATTCTTAGAAATGCATGCCTTAAAGACCTTACATTGGGTGAAGTACTTCAAATCCTGAATATGATTATCACTCTGAAGCGTTGGATTAAAACTCGCTCTGATTGGCATCAGATTACTATTACTCTTCCAGAAACTAATAATGACAATGATACCAGAACATGCATCTAGCCGACAGATCTCTTTTGGTATTTTAGCATGTCATAGCCGTGACATGTTTTCAGAAATGGATTTGATATCTTGGGAGTTACAGATTTTAAAAGAAGCTCAATTTTGTATAAGATGGTATGTTCAGTGCTTACTTGATGACGGCATAGGAGCGAGATCTTTTTTACTTTTGTGGACCTCTTTCCAAGACACTTGCAGCTGATATAAGTGTGCAGCTAAAGGGATGTGATTGTTATCATGCTTCTATCAACCTTGCTATGCTGATGGATCTCGTAATCTTACATTTACAGCAGCATCGTTTCTGCTATCTTCACTTTCTTTATCTTAAAATTTCCTTTTCGCTGGAAATTTTGTTTGCATCAGCAAGTCTACTACTGCTTTCACATTACTTGGATTTGGGGCATCCAGGAATATGCAGATTGTATTTTGGTTACCTTGGTGAGTTGAGAACTGGCCAGAAGCACAAAGGTTTTGGGTTGCAGGTTGACAGGAATATTTTGTAGTCACTGTTCTTCTAGCCAGAATATAAATAATGAAAAGTGGTTTAGAACAGATCCAGTAACCTTGTTTTTTAAGCTTTATCAAATGGAATATGTAGATTTACTTCACCAGCGTTTTTGATAACGTTGTCCTTTTGCCTATTCTTTTTGTTTCTTGGAACTTATGACTGTAAATCACTTCTGCAGATAAGATTATATGTAGCTTTAATTGG</genome_strand>
        <mrna_strand>GGTTGTTACAAATCAGGTTAATGGCAGCAGAGTGAGAGAGAACCCTCGCGGCGTTATAGTCGATGGCCGGAGACAAATTGAAGGCGGGTCTTCCTGGCGGAAAAGCGGCGGAACCGCAGTACCAGGCGGCGAAAACATCGGTGTGGTGGGATATAGAGAATTGTCAGGTGCCCAGGGGATGCGACGCTCATGCAATTGCTCAGAATATAAACGCTGCATTGATGAAGATGAACTATAATGGACCAGTCGCTATTTCCGCCTATGGAGACACAAATCGTATTCCCTCGTACATTCAACGAGCCCTTTCTAGTACTGGAATCAGTCTCAATCACGTCCCGGCCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCTAAGGATGCTAGTGATAAGAAAATATTGGTGGATATGCTATTTTGGGCAGTGGACAATCCTGCACCTGCCAATTATTTGCTCATTTCAGGAGACAGGGATTTCTCCAATGCCATTCATCAGTTACGGATGAGGAGATATAATATTCTTCTAGCACAGCCTTTTAAGGCTTCTCCTGCTCTTGCTGCTGCTGCCACAAATGTGTGGCAATGGATAAGCCTTGCTGCTGGAGAATCTCCACGAGAACTTACTTTTGGTACTAACACATCACATCAAGAATCTATACCGACTCCAGTTTATGAACCTATATCAGCAAACCAACCTGCATATTCTAATGCCAATACCAATATCAATACCAACGCCAATAATGCCAATGCCAACTCCAACTCCAACGCCAAAGCCAAATCCAAAGCCAATGCCAATGCCAATGCCAACGCCAATATCAATACCAATATCAATACCAGTGCCAACGCCAATATCAATACCAATAGCAATGCCAATGCCAATGCCAATGCCAATACCAATACCACAACCAATGCTAATGCTAATACTAAAACTAAAGTTATTTACGTACCAAAGAACTCAAATCAACTGACTATGACCGGTAGGTCAAGTATGCCAGCTAGAATTGAAGAAACTAGTAGCAGCTATCGCCCACACGCACCAGCTGTTGCACCAGTGCAGTTTGCACCACATATATTTTTCGCAAAGTCTGATAGTTCAGAGAACCATAACAGTAAATTCATAGAAAACAAGCCTGCTCAGCGTACTCAATCTCAGCCTCCTCTTGTTCGAGATAACTTTGTGAAGAAATTCAACTTCCGCCAGAAGAATTTGCAACCTTCGCTTCAACGACCTGAAG...............................................................................................................................................................................................GTAGGGGTGATTTATGTGGTTCTATGAACAAGGGTGATGTATGTCCTGAGTTTTCCTTCCTTCCATCCTCATCGGGTGCTTCTAAATCTGTCTCTGGTAATTCAAATTTGGAACTCCAGCTGCCTGAACTCATTCAAGGTCTTATAGGGGTCATCCTTCTTTCGTTGGACAGTTTGAAGCTCGAGAAGATTGTGCCTACCAAAGAAAACATCGGTTATTGTCTACGTTATGGTAACCCTAAATATCGTCATATTGATGTCACAGTAGCATTAAATGCTGCACTAGAGCAACAGATGATAGTAAAGTTAAAACAAGCTGATATTGAACTATATGTTGGTAGAAATGAGAGGATTTGGAAATGTGAGAATCCACTTGGTGGCAATCCTAACCAATATCACAATGCAACTTGGAACGTGATTGAGAAATTTCTTTGTTCAACTGTTGGACGTTCAGCAATAGCAGCATCTGAATGCAG.......................................................................GTATGAAGCTGCTTTGATTCTTAGAAATGCATGCCTTAAAGACCTTACATTGGGTGAAGTACTTCAAATCCTGAATATGATTATCACTCTGAAGCGTTGGATTAAAACTCGCTCTGATTGGCATCAGATTACTATTACTCTTCCAGAAACTAATAATGACAATGATACCAGAACATGCATCTAGCCGACAGATCTCTTTTGGTATTTTAGCATGTCATAGCCGTGACATGTTTTCAGAAATGGATTTGATATCTTGGGAGTTACAGATTTTAAAAGAAGCTCAATTTTGTATAAGATGGTATGTTCAGTGCTTACTTGATGACGGCATAGGAGCGAGATCTTTTTTACTTTTGTGGACCTCTTTCCAAGACACTTGCAGCTGATATAAGTGTGCAGCTAAAGGGATGTGATTGTTATCATGCTTCTATCAACCTTGCTATGCTGATGGATCTCGTAATCTTACATTTACAGCAGCATCGTTTCTGCTATCTTCACTTTCTTTATCTTAAAATTTCCTTTTCGCTGGAAATTTTGTTTGCATCAGCAAGTCTACTACTGCTTTCACATTACTTGGATTTGGGGCATCCAGGAATATGCAGATTGTATTTTGGTTACCTTGGTGAGTTGAGAACTGGCCAGAAGCACAAAGGTTTTGGGTTGCAGGTTGACAGGAATATTTTGTAGTCACTGTTCTTCTAGCCAGAATATAAATAATGAAAAGTGGTTTAGAACAGATCCAGTAACCTTGTTTTTTAAGCTTTATCAAATGGAATATGTAGATTTACTTCACCAGCGTTTTTGATAACGTTCTCCTTTTGCCTATTCTTTTTGTTTCTTGGAACTTATGACTGTAAATCACTTCTGCAGATAAGATTATATGTAGCTTTAATTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U604139" ref_strand="-" ref_description="SGN-U604139 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157336240|emb|CAO70925.1| (e_value=1e-82) unnamed; (*ATH) AT3G17430.1 (e_value=3e-83)  Symbol: None | phosphate translocator-related, low similarity to phosphoenolpyruvate/phosphate translocator precursor (Mesembryanthemum crystallinum) GI:9295275, SP:P52178 Triose phosphate/phosphate translocator, non-green plastid, chloroplast precu... ; (*SWP) sp|Q10354|YDB1_SCHPO (e_value=5e-13) Uncharacterized transporter C22E12.01 OS=Schizosaccharomyces pombe GN=SPAC22E12.01; ">
      <seq>acagtttatcaggtcactggaatatttgctgaggcgcttaggctggtcctaactcaagttctgcttcagaagaagggactaactctcaatcctatcaccagcctatattacatagctccatgcagctttgtctttctctttgtcccatggtatcttctggagaagccggagatggaagtctcacaaattcaattcaacttctggatattcttttcaaatgcactttgtgctcttgctctgaatttctctatcttcttagtgattggtagaaccggtgctgtaaccatccgagttgccggtgtcttgaaagattggatacttattgccctttcaacgctaattttcccagagtcgacaataaccacacttaatattacaggctatgccattgcattatgtggtgttgtgatgtataactacttgaagatcaaggatgttcgagctgttcaacttcctgtagatagtgtttctgatcgaatagcgaaggaacttaaaatggagaagaagtcatccaatctgtatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="-" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="52380" stop="49776"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52080" g_stop="51956" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="125" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="51955" i_stop="50987" i_length="969">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.847" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50986" g_stop="50721" g_length="266"/>
          <reference_exon_boundary r_type="cDNA" r_start="126" r_stop="391" r_length="266" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="50720" i_stop="50642" i_length="79">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.338" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="50641" g_stop="50547" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="392" r_stop="486" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="50546" i_stop="50114" i_length="433">
            <donor d_prob="0.958" d_score="1.00"/>
            <acceptor a_prob="0.954" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="50113" g_stop="50076" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="487" r_stop="524" r_length="38" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="-" ref_id="SGN-U604139" ref_strand="-">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>524</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U604139" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="52080" e_stop="51956"/>
          <exon e_start="50986" e_stop="50721"/>
          <exon e_start="50641" e_stop="50547"/>
          <exon e_start="50113" e_stop="50076"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAGTTTATCAGGTCACTGGAATATTTGCTGAGGCGCTTAGGCTGGTCCTAACTCAAGTTCTGCTTCAGAAGAAGGGACTAACTCTCAATCCTATCACCAGCCTATATTACATAGCTCCATGCAGGTATGTAATAGATGATCCTATCTCATTGAGTTGAGTTATTTGCTCTCATGTGGTGCAGTTTAATACATTATCCTGTGTTGAGGTCTATATGATTCCAGTAAGATCTTACTTCTTTAAATAAGAAAAAAAAGAAATTCCAGTTAGATCTCGGTTTTTGATGATTCCAAACCTCCCATCTTGCTCATTCTCACTTGGGAGAACAGGAGAAAAGTAAACCGAGAACACATACAATTGGAAACCTTTTCCATACATTTGATTCCTGTCATAAATGTACCTTTCGGGATGGGCTTGAGCTACTTTTTCATCTTTTTGTTCTTTAGAGTGCTCATCATTTCATGACATTATGACTGCAATGTACCTCAGATCAGTTTACTGCTGATATTAAAACTAGAAGGAGGCACTTCTGTATCGCGTTTTTATAAAATTTATAGCTAGTTTCCAATTGCTTGAGAGTATGTTCGTTAGAGCTCAAGTTGGTAGAGTGTAACCACACATTTCTTTCTTGTGGAATTCTGACATATATATAATTATACCTTTTTGGTAACAAGTGGCTATACTTGTTTTTCTGTTAGCATGTAGTCTTCAGCTGTGTCCTGCATCTGGCATGACTTATTAGTTATTACTGTATCCTGACTGGTCTGATAAAGTCAAAAGAGGTGGAAATGATGCTAGGGGGATTAGTATTTGGTTGCTAGTTCTTTTATGGAAAATTTGTTCTGTGCACACATAAATAGACACATACTCTGTTATGTACGTGCTCCTCTCTTTAGTTTTGTTTTGTCTCACTTGGCGAGAGATTTTCTGTAAAGAGGCAATTGCTGCTATATGTCACCTGAATCTGATAATAAGTAAGTATGAGAGTTATCTCTGTATTCTAAATGTCTGTTTTTATTTGGTTTTAGAGTCTCATGCAAGTGCCTCCGTATTATTTCTTGGGTGTTGCTTATGATCACATGTTTCAACGTGCAGCTTTGTCTTTCTCTTTGTCCCATGGTATCTTCTGGAGAAGCCGGAGATGGAAGTCTCACAAATTCAATTCAACTTCTGGATATTCTTTTCAAATGCACTTTGTGCTCTTGCTCTGAATTTCTCTATCTTCTTAGTGATTGGTAGAACCGGTGCTGTAACCATCCGAGTTGCCGGTGTCTTGAAAGATTGGATACTTATTGCCCTTTCAACGCTAATTTTCCCAGAGTCGACAATAACCACACTTAATATTACAGGCTATGCCATTGGTAAGCTTAATGTTTCTTCTTATTTATGGGAGCTTTGTGCCATCAAACATCTTACTAAAATATTTCTGTTTTTGTATAGCATTATGTGGTGTTGTGATGTATAACTACTTGAAGATCAAGGATGTTCGAGCTGTTCAACTTCCTGTAGATAGTGTTTCTGATCGAATAGCGAAGGTCTGATCTAATGACTTTAAAGTTTCGATTTCAGAATTTGCATTATCTTTTTTGGAGTTTGGTGTTCTTATTCTTTATTCATCACTTGTTATCAATTTTCCCCAAAAGGAACATCAGTATATGATGATCCATACTTCTTTTGTTCTTTTGGGAGCACCAATTTCCAGTCTGAAAATCATTGTAGCATGTCTAGAAAGGAGCTACGAAATAAAGAGAAGAAGAAATTAGACAGGAGCTAGAGAATAAGCTAAACTTATGATCAACAGTTATTATTTTTAACATAATTTGAGCTTGCATGGTTGCTTAATTATATACGTCTGTCTCTGTTCATCATGGAATCTTTAGCTTGCATGAAAACAAAATTTCTAGTAAAGATGGATTTTATTACAAGCAGCGCCAAAAAAAATGTCTTCATGCAATTTGCCTCTGACAGGAACTTAAAATGGAGAAGAAGTCATCCGATCTGTATGT</genome_strand>
        <mrna_strand>ACAGTTTATCAGGTCACTGGAATATTTGCTGAGGCGCTTAGGCTGGTCCTAACTCAAGTTCTGCTTCAGAAGAAGGGACTAACTCTCAATCCTATCACCAGCCTATATTACATAGCTCCATGCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGTCTTTCTCTTTGTCCCATGGTATCTTCTGGAGAAGCCGGAGATGGAAGTCTCACAAATTCAATTCAACTTCTGGATATTCTTTTCAAATGCACTTTGTGCTCTTGCTCTGAATTTCTCTATCTTCTTAGTGATTGGTAGAACCGGTGCTGTAACCATCCGAGTTGCCGGTGTCTTGAAAGATTGGATACTTATTGCCCTTTCAACGCTAATTTTCCCAGAGTCGACAATAACCACACTTAATATTACAGGCTATGCCATTG...............................................................................CATTATGTGGTGTTGTGATGTATAACTACTTGAAGATCAAGGATGTTCGAGCTGTTCAACTTCCTGTAGATAGTGTTTCTGATCGAATAGCGAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTAAAATGGAGAAGAAGTCATCCAATCTGTATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U564053" ref_strand="+" ref_description="SGN-U564053 Tomato 200607#2 [14 ESTs aligned] (*GB) gi|15230001|ref|NP_189598.1| (e_value=2e-45) expressed protein [Arabidopsis thaliana]; (*ATH) AT3G29575.1 (e_value=1e-47) | Symbol: None | expressed protein | chr3:11384729-11386136 REVERSE | Aliases: MWE13.5; ">
      <seq>ggttgttcctctttttctctgtttttctttatatggctcaagttaactcttttgccggcgaattcaggaactccggcaactacattctctaacgtttacagaattttctgtttattataattgaattaaaaagttgtttggagttttggggtttggtttgtttaaaatggctgaagctgaagaaaatagagaaaagaggtgtttttctagtatgcagatggaagttttttcaagagatctgttgcataaatttatgaatggaaacaacaataaatttcatgaaattcctaatgaggaagatgaattggagctgagtttggggctttccttgaatggaagatttggggtagacccagaaagggctaagagactaaaacgctcttcttcaatttcaaactttgtgttttccggcggggatgagagtaatgggcgttgttcattctctgttggtccgattgcgaggacgtgttctttacctgttgagggtgaggaggagtgcagaaaaaggaaggagttgcaatctctgaggcgtttggaggctaaaagaaagagaatggagaaattacgagtggttaaggataaggttgatttagatgaacgtcctgaagaaaatggtgggagtaataatggtccagttggaaattcattgcctctgtcacaagggtctatggcttctcagggaagtggttcttcaggaatttctgattttgggagtcaacccattcaagggccaggtgacaacagtactggggcaaatactccgactagcatcaagccttcagagcaagaacatgaacagaaacaggttgccaaaccacctaaaatcacaagcgaaaaaccacctaccacatgtaatggaagtgccagcaaggaagcgaaagaaatgttcaaaaactacatgctcaacatgccctgtgtttccacaatgggcaaggggccaaatggtaagaagattgaaggatttctgtacagatatcagaagggagaggaagtaaaaataatgtgtgtttgtcatggtaactttctctccccagctgagtttgtgaaacatgctggtggcggtgatgttgcaaatccgttgaagcaaattgtcgtcaatccttcacctctgttgagatgatgccagtggaactctataatgacacagaaaaggggcaaagcttcaagaattcagctttgctatcatcgttcatcttcttttgtaacatggaccaaggttctttttttattttcgagtagatagtagtttcttgcgggatattgcataatcaatgggcaagtttatcccctttctgtggggaaaaaaaatttaagaattcccattggcatttatctttcagttattcgttatttggaagtccgcattaatttttcgtacatgaagggactgtagagtgcagttggttccatatcggtttcaacacgaaatgtgacttttgaaggggtggtattatcagcaaagtctaacaagcttgaccagcctttgctcttaactgttgcagtttcatggcgttaaagagtcgtcggattacttgaaaattttcttagtgctcttctctcttcaatgcggcctttgtttctaacgataacgttagtaattccatgtaaaatatattagttaacaatgatttttttgttcgcttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="-" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="64773" stop="61192"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64474" g_stop="63747" g_length="728"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="728" r_length="728" r_score="0.999"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="63746" i_stop="62407" i_length="1340">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62406" g_stop="61492" g_length="915"/>
          <reference_exon_boundary r_type="cDNA" r_start="729" r_stop="1644" r_length="916" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="-" ref_id="SGN-U564053" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1643</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U564053" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64474" e_stop="63747"/>
          <exon e_start="62406" e_stop="61492"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTTGTTCCTCTTTTTCTCTGTTTTTCTTTATATGGCTCAAGTTAACTCTTTTGCCGGCGAATTCAGGAACTCCGGCAACTACATTCTCTAACGTTTACAGAATTTTCTGTTTATTATAATTGAATTAAAAAGTTGTTTGGAGTTTTGGGGTTTGGTTTGTTTAAAATGGCTGAAGCTGAAGAAAATAGAGAAAAGAGGTGTTTTTCTAGTATGCAGATGGAAGTTTTTTCAAGAGATCTGTTGCATAAATTTATGAATGGAAACAACAATAAATTTCATGAAATTCCTAATGAGGAAGATGAATTGGAGCTGAGTTTGGGGCTTTCCTTGAATGGAAGATTTGGGGTAGACCCAGAAAGGGCTAAGAGACTAAAACGCTCTTCTTCAATTTCAAACTTTGTGTTTTCCGGCGGGGATGAGAGTAATGGGCGTTGTTCATTCTCTGTTGGTCCGATTGCGAGGACGTGTTCTTTACCTGTTGAGGGTGAGGAGGAGTGCAGAAAAAGGAAGGAGTTGCAATCTCTGAGGCGTTTGGAGGCTAAAAGAAAGAGAATGGAGAAATTACGAGTGGTTAAGGATAAGGTTGATTTAGATGAACGTCCTGAAGAAAATGGTGGGAGTAATAATGGTCCAGTTGGAAATTCATTGCCTCTGTCACAAGGGTCTATGGCTTCTCAGGGAAGTGGTTCTTCAGGAATTTCTGATTTTGGGAGTCAACCCATTCAAGGTATTATTCTCGTTCATTAAATTTTTTTATCTTTACGGGCGATTTGGCCTTAGAATTCTCGGATTTATAGTGGTTAAGGTATTTATTTGCCTATTCTATTACTATCTTCCTATCGGGGGAGTTCTTATGTTCCTCATTAGAGTAAAGATAATTCTTTTACTACTCTTCGTTAGGGATCTTGTAAATATAGATTTTCAAGAAGAATCTTGTTCTTTAATAAATATAGTGTCTTGGTTATGGGCGATGTGCGCTAAAAATTATTATCCCACAACCATTTTGTTCAGAAAAGGGGAGAAATAAAATTTCCATACTTTAGGTTTCTATTATAGAGGAAGTGAGATGGACGTTGCCAAAGGAATAAAGATTAAGACATCTACCTGCACCTGGAGTCGTGGACTTCTTTAGGAACTTTCCTGTTGTTTACCTGAATTCACTGTCCACCCTTAATGTTGTGGTATTCACTGCAAATTTCCCCTCTTTCACCTTCTAATATCTGATATTCTTTGAACTGATCGGACATGCCGATTTTTCCAAGAGTGTTTTACATGTGGACTTACTGGGCGGTATCACTTGTTTCCGGGGGAGGGGGGTAAGAAATCCTTGAGGCTAATTCTTTCTTTTTTCCAGGAAGGTAGGAGTTTTTTTTTTAATCTAATGATAACTTCGGTTAAATAATTGTGCACTTATTGAAGCTTGGACCAAGTGTAGCAACTTTATATTAACTAAACGAATACACAATCTTAAAATTCTGGATCTGCCACTGCCGTGGTATGTTACCGTAGTAGAATTTGAGCGTCCTTTGTTTGGCTGACAATGTTTTAGCAGAATCTTATTTCTTCTTAGTCACTGTACGTTCTCAGAAGTTGTCTGCAGAGGAATCTTATTGCCTTTGATTAGCTTTGCCTGGTCCTGTCTCTTTGGGTGGAGTTTTATTGCCTATGTCGTAGAGATTTTGACCCCTCCTGCAACGCTGTATGTTCCAATTCAAAACAGCTACTGCTTGCAGTGGAGTTATATTGCCTATAGGTCCTTCGAGAGGGGTTGTAGTAAGATTTTACCCCCCCCCCCCCCTCTATCACTGTTTTTCCAACTCAAAGTAGCAACTAGTTCAAGTGGTGAACGTATGTGCTTTCTCTTGATGCTCTAGCGTGATGTTCTGCACGTGATCTCTCTAACACAATGTTTTTACCGCCGTTAAGACTTGAAGTAAGCTTTGATTTCTGTATCAAGCCATCTGTCCTTGCAGGTGGTTGATAGACAGATTCTCTTCACCGTCTCTCTCTTGCACATAGATTCCTGACGGGAAGAGCTGACCTATTTTCAATCTTAAACTATTGCAGGGCCAGGTGACAACAGTACTGGGGCAAATACTCCGACTAGCATCAAGCCTTCAGAGCAAGAACATGAACAGAAACAGGTTGCCAAACCACCTAAAATCACAAGCGAAAAACCACCTACCACATGTAATGGAAGTGCCAGCAAGGAAGCGAAAGAAATGTTCAAAAACTACATGCTCAACATGCCCTGTGTTTCCACAATGGGCAAGGGGCCAAATGGTAAGAAGATTGAAGGATTTCTGTACAGATATCAGAAGGGAGAGGAAGTAAAAATAATGTGTGTTTGTCATGGTAACTTTCTCTCCCCAGCTGAGTTTGTGAAACATGCTGGTGGCGGTGATGTTGCAAATCCGTTGAAGCAAATTGTCGTCAATCCTTCACCTCTGTTGAGATGATGCCAGTGGAACTCTATAATGACACAGAAAAGGGGCAAAGCTTCAAGAATTCAGCTTTGCTATCATCGTTCATCTTCTTTTGTAACATGGACCAAGGTTCTTTTTTTATTTTCGAGTAGATAGTAGTTTCTTGCGGGATATTGCATAATCAATGGGCAAGTTTATCCCCTTTCTGTGGGGAAAAAAAATTTAAGAATTCCCATTGGCATTTATCTTTCAGTTATTCGTTATTTGGAAGTCCGCATTAATTTTTCGTACATGAAGGGACTGTAGAGTGCAGTTGGTTCCATATCGGTTTCAACACGAAATGTGACTTTTGAAGGGGTGGTATTATCAGCAAAGTCTAACAAGCTTGACCAGCCTTTGCTCTTAACTGTTGCAGTTTCATGGCGTTAAAGAGTCGTCGGATTACTTGAAAATTTTCTTAGTGCTCTTCTCTCTTCAATGCGGCCTTTGTTTCTAACGATAACGTTAGTAATTCCATGTAAAATATATTAGTTAACAATGA-TTTTTTGTTCGCTTC</genome_strand>
        <mrna_strand>GGTTGTTCCTCTTTTTCTCTGTTTTTCTTTATATGGCTCAAGTTAACTCTTTTGCCGGCGAATTCAGGAACTCCGGCAACTACATTCTCTAACGTTTACAGAATTTTCTGTTTATTATAATTGAATTAAAAAGTTGTTTGGAGTTTTGGGGTTTGGTTTGTTTAAAATGGCTGAAGCTGAAGAAAATAGAGAAAAGAGGTGTTTTTCTAGTATGCAGATGGAAGTTTTTTCAAGAGATCTGTTGCATAAATTTATGAATGGAAACAACAATAAATTTCATGAAATTCCTAATGAGGAAGATGAATTGGAGCTGAGTTTGGGGCTTTCCTTGAATGGAAGATTTGGGGTAGACCCAGAAAGGGCTAAGAGACTAAAACGCTCTTCTTCAATTTCAAACTTTGTGTTTTCCGGCGGGGATGAGAGTAATGGGCGTTGTTCATTCTCTGTTGGTCCGATTGCGAGGACGTGTTCTTTACCTGTTGAGGGTGAGGAGGAGTGCAGAAAAAGGAAGGAGTTGCAATCTCTGAGGCGTTTGGAGGCTAAAAGAAAGAGAATGGAGAAATTACGAGTGGTTAAGGATAAGGTTGATTTAGATGAACGTCCTGAAGAAAATGGTGGGAGTAATAATGGTCCAGTTGGAAATTCATTGCCTCTGTCACAAGGGTCTATGGCTTCTCAGGGAAGTGGTTCTTCAGGAATTTCTGATTTTGGGAGTCAACCCATTCAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCAGGTGACAACAGTACTGGGGCAAATACTCCGACTAGCATCAAGCCTTCAGAGCAAGAACATGAACAGAAACAGGTTGCCAAACCACCTAAAATCACAAGCGAAAAACCACCTACCACATGTAATGGAAGTGCCAGCAAGGAAGCGAAAGAAATGTTCAAAAACTACATGCTCAACATGCCCTGTGTTTCCACAATGGGCAAGGGGCCAAATGGTAAGAAGATTGAAGGATTTCTGTACAGATATCAGAAGGGAGAGGAAGTAAAAATAATGTGTGTTTGTCATGGTAACTTTCTCTCCCCAGCTGAGTTTGTGAAACATGCTGGTGGCGGTGATGTTGCAAATCCGTTGAAGCAAATTGTCGTCAATCCTTCACCTCTGTTGAGATGATGCCAGTGGAACTCTATAATGACACAGAAAAGGGGCAAAGCTTCAAGAATTCAGCTTTGCTATCATCGTTCATCTTCTTTTGTAACATGGACCAAGGTTCTTTTTTTATTTTCGAGTAGATAGTAGTTTCTTGCGGGATATTGCATAATCAATGGGCAAGTTTATCCCCTTTCTGTGGGGAAAAAAAATTTAAGAATTCCCATTGGCATTTATCTTTCAGTTATTCGTTATTTGGAAGTCCGCATTAATTTTTCGTACATGAAGGGACTGTAGAGTGCAGTTGGTTCCATATCGGTTTCAACACGAAATGTGACTTTTGAAGGGGTGGTATTATCAGCAAAGTCTAACAAGCTTGACCAGCCTTTGCTCTTAACTGTTGCAGTTTCATGGCGTTAAAGAGTCGTCGGATTACTTGAAAATTTTCTTAGTGCTCTTCTCTCTTCAATGCGGCCTTTGTTTCTAACGATAACGTTAGTAATTCCATGTAAAATATATTAGTTAACAATGATTTTTTTGTTCGCTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U582782" ref_strand="+" ref_description="SGN-U582782 Tomato 200607#2 [6 ESTs aligned] (*GB) gi|157341261|emb|CAO49168.1| (e_value=4e-109) unnamed; (*ATH) AT5G60980.2 (e_value=1e-86)  Symbol: None | nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein, G3BP ras-GTPase-activating protein SH3-domain binding protein, Mus musculus, EMBL:MMU65313 | chr5:24560586-24563495 FORWARD | Aliases: ... ; (*SWP) sp|Q5R9L3|G3BP2_PONAB (e_value=2e-22) Ras GTPase-activating protein-binding protein 2 OS=Pongo abelii GN=G3BP2; ">
      <seq>aaagcttgccgactcctactcatatcgttcactattgaagtttagtttttggcttaattgtcagtccctttcatcggcttaactacataataatagttgcttccgtaaaactcatcaaatctacaaaaatctgtcttcctttcgctttcttctaagtgtctgtctccccatacttgagtcgagggataaggctgcttacacactacataatggctatggaaactacagctataccttctgcccctgctgcacaagtgatcggaaatgcttttgttgagcagtattaccaaattcaacaccactccccagagttggtatacagattttgtctggattcaagtgtcttaagccgcccaaattctaatggcgtgatgacatccgtgacaacaatgaaaaatatcaatgacatgatatgctcattaggctacaagaattataaggcagagataaagactgcagatgcacaacagtcctacaaggatggggtcattgtattggttactggatgcttaactggaaaagataacacgagaaagcaattcacccagacttttttccttgctccacaggacaaaggctactttgttttgaatgatgttcttaggtatgcagaacaagtggagactgataacagttcagaaatggttaatgcggtcaaggatgtagcacccgtgcctttgacgcctgatccagaaccagttcatgtgcttcagccttcgaatcacagacagcctagctctcatgcagaagatataaaaattgttgaggaagtagttcatggttctttggaaaatgagaaggtagttggtgatgaaagagagattatggtgggtgctgaatcccatattaatgcagaaccagctacttcagtttcccgagaagatgctcctaagaaatcttatgcttcaattgtaagttctcaaacaaagaaagggcccgccaaaatctatgtaccctctaattcaagaatggctcccgcaaagactgaaaagcagccagttaagtcagtggcacaagctcctgttcctgaatcatcaattcatactgcctctgggggtaatgcatctgaatctaaagatgctcagtacagagctgagggacactccatttatatccgcaatttgcctttaaatgttactgttgctcaacttgaggttgaatttaagagatttggacccattatgcaaggaggcatacaagttagaagtaataggcaacaaggattctgcttcgggtttgttgaatttgaagatttgaactccatgaacagcgcgatacaggcctcacctgttacaattggaggtcttcaagctgagcttgaaataaagcgaactacaagtaaagttggtagcgggagaagtcgtttccctaccggaagaggagcagggtaccgaaatgaaaatttcaggggccgcggaaactttagtggtgcaggtagaggatatggtagaagtgattttaatggaggtcgtggaggacgaggtggtgaaagttaccaacaaggaagagggagaggcggacggagaggtggcctaagccaaattccttcttcagcatagaagttttatgttgcaaattttgacggtgtttccttcttcagcatagaagttttgtgttgcaaattttgaccaagctttgtgttgccattggcaccaacaggttaattgtgcagtttagtttgatatttttcttattatac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="-" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="75970" stop="70317"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75670" g_stop="75515" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="156" r_length="156" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="75514" i_stop="74565" i_length="950">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="74564" g_stop="74513" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="157" r_stop="208" r_length="52" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="74512" i_stop="73953" i_length="560">
            <donor d_prob="0.330" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="73952" g_stop="73766" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="209" r_stop="395" r_length="187" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="73765" i_stop="72842" i_length="924">
            <donor d_prob="0.893" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="72841" g_stop="72544" g_length="298"/>
          <reference_exon_boundary r_type="cDNA" r_start="396" r_stop="693" r_length="298" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="72543" i_stop="72463" i_length="81">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="72462" g_stop="72064" g_length="399"/>
          <reference_exon_boundary r_type="cDNA" r_start="694" r_stop="1092" r_length="399" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="72063" i_stop="71800" i_length="264">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.817" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="71799" g_stop="71678" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="1093" r_stop="1214" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="71677" i_stop="71568" i_length="110">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="71567" g_stop="71502" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="1215" r_stop="1280" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="71501" i_stop="71171" i_length="331">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="71170" g_stop="71107" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="1281" r_stop="1344" r_length="64" r_score="0.984"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="71106" i_stop="70972" i_length="135">
            <donor d_prob="0.986" d_score="0.98"/>
            <acceptor a_prob="0.995" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="70971" g_stop="70617" g_length="355"/>
          <reference_exon_boundary r_type="cDNA" r_start="1345" r_stop="1699" r_length="355" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="-" ref_id="SGN-U582782" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1699</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U582782" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75670" e_stop="75515"/>
          <exon e_start="74564" e_stop="74513"/>
          <exon e_start="73952" e_stop="73766"/>
          <exon e_start="72841" e_stop="72544"/>
          <exon e_start="72462" e_stop="72064"/>
          <exon e_start="71799" e_stop="71678"/>
          <exon e_start="71567" e_stop="71502"/>
          <exon e_start="71170" e_stop="71107"/>
          <exon e_start="70971" e_stop="70617"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGCTTGCCGACTCCTACTCATATCGTTCACTATTGAAGTTTAGTTTTTGGCTTAATTGTCAGTCCCTTTCATCGGCTTAACTACATAATAATAGTTGCTTCCGTAAAACTCATCAAATCTACAAAAATCTGTCTTCCTTTCGCTTTCTTCTAAGGTAATTTTCTTCATTAATTTGTTAATGATTTGTTTAATCACACTTTAACTTTCTATTTAATTTAATATTAGTATACTATCTAATCTACAATGGACAGTTATCCCATCACACATCACAATTTTTCTTCTTTCCAGTTCAAATTTTGTTCTGTTTCATCTTGATCAGCGTTTTATTCTTAATCACGATGAATATCCAATTTATTTTTTTACTTATTTTAATAAATCCTGTTTGATTGGAATGTGGCGAATTAATCGATTGATTTATTGTTGTTGGGACTGTTTGGTTTTTTATTGTGAGAGAATGGAAAACTGAAGGCAGATCTGTAAATTTTGCAATTTTGAGTTCTTCCAACATTAATACATGAAGAAAAAAATGTAACTTTACCTAGTCGAACACATTGATTTCTCAGAACGGTTAATGCTGTGTGAGGCAGATTCGGGATTTAAAGTCGATTGTTCATACAATAATACTTAATAATAGTTTGATTCATATAGTCAGAAAAATAATACATATTTTGTGAATTTTTTAATACAAATACACTGTGGAACATAAGCTATTGGGTTCACGTGGACCCTTACCTCTTATAGGTAGGTTCCCCTGGCTCTGTAGTGCCATTCGTCCTCAATGCTACTGCTAGTTCTTTTGTTTTTGTTGATTTGTATGATTTAATTTGATTAAATTTTTGTTTTTTTTTTGAGTGTGGTCGTCATCGTCCATCTAATGTAGTCTTTTATCTTTATAGCTTCAAGAGAAGCTTTGTTTTAATTTTTACAAAAGTTCTCATCGCTAAAAGATCTATGTAGGAAATACCAATTAGTTTGGGCTATATTTTGTTATGTTAGTACTTGTGTTTTACGCCTTATGATTTCTACAACTTTTTAGCTCTGTCGAAGATTTTTATGCCACTATAGTATTTTTATATTTTTTTTTAATCTTTCTTATTATTGCAGTGTCTGTCTCCCCATACTTGAGTCGAGGGATAAGGCTGCTTACACACTACATGTGGGACTACGCTGGATTTATTGTTGTTATATAATTGTTAGTCTAAGATAGTACCGTATTTATAACACTGACCCCAACTTGTTTGTGATTGAGGTGTTGTCATCAGAACTTTTATTGACCGGAAAAGAATTTGTTTCTGAAGATGCATTCTTCTGACCTTCTATGTTGTTGCTTTTAGGGCTCAATGAGTCCACCTTAGGACTAACTTTTCCTTTTCTGTAATTAAGTCTTTTATTGTCTTTTGTGTTATCTGATTTGGGAAATATCTGTATGTTAACATGGATTACTTATTGACTTTTGTGTTATCTAATTTGGGATTTAATATGTGTATGTTAACATGGATGATTTCTCAACCTCAACCCTTGATTAGTTTCTTCTTAGTAATGTTGCTCTATTACTTCAGACTATGAACTACTATGTTGTGCTTCTTTTTTCCTTGGACGAACATGCTTTGTGATGCATATTTTTGTCAAACTATTACTTTTTTACTTGTACACATTACACATCAGGGCTGGTCTTTTACTGACTATTGTCTTGACTCTTCCCTAAATTTTGTACAGAATGGCTATGGAAACTACAGCTATACCTTCTGCCCCTGCTGCACAAGTGATCGGAAATGCTTTTGTTGAGCAGTATTACCAAATTCAACACCACTCCCCAGAGTTGGTATACAGATTTTGTCTGGATTCAAGTGTCTTAAGCCGCCCAAATTCTAATGGCGTGATGACATCCGTGACAACAATGAAAGTGAGTATAAATGCAATTGTTGTTCCTTCTACTATACCAGAGAACTTTTATGAATAAGGGAAAAAAAACATGGTCTAAAACTCTAAGGCTAATACAAACTTTTATCTGCTGTCGGTTTATCAACATCATAGGTGTTAGTTCACAATGAGAGTTTCACCCCTTCTAAATCGTGTGATCTCCTGGAAACTTCTGTTTTGGGGGGGGGTGGGGGTGGTTAAGTTTGGTGGAAGTCGATAATTGAGGGGCACATTTGAGGACTTTTTCCATAGAAGAAACTGATTGTATAATGCTGAATATAATCTGACCTGCTATTAGTGAAGAACTTAGTTGCATCTGGATGTGGAAGCACAGGGAATTGGACAAATGATAAACTACGTAGAGGACTATAGACTCTTAGTCTTACTTTGGCGTTGGTTAATGATTGACAATAAGAATGAAAATCAACCACATAAATAGAGCAATTAAACTGCTGGGCTTGTGCAGTTGCAAGTCACTTTTAGAAATTATTAAGATGTATGAACATATCGCGAAACCTGTCAACCCTACAATATCTTGAAATAATAAGGTTCTTGGTTTGTAGCTTCAAAGCTAGTGTTTAAATGATTTGCAAGAAATTTCTTTTCGAGAAAATTGGAACTCTATTTAATATTCTAATACAATTCAGAATGATCTTGCGATTATGATGTAACATTCAGAAACTTGCATTCTCTGGGAGAGTTGTGTTATCATTTCTCTAAAGTTTTACCATTAGAAGTAGTTGGCAAAATGGTGAAGTGCTTTCTCTATTTCTTACCTTGCACCATGTTCACATATTTATCTTGGCAAGTTTGCAATATAAAATAACAATTGATTTCTCATTCCACAATTCTGACTAATTTTCACTTATCTTTAACTGATTTTTCACTTATCTTTATGTTGGATCAGAATATCAATGACATGATATGCTCATTAGGCTACAAGAATTATAAGGCAGAGATAAAGACTGCAGATGCACAACAGTCCTACAAGGATGGGGTCATTGTATTGGTTACTGGATGCTTAACTGGAAAAGATAACACGAGAAAGCAATTCACCCAGACTTTTTTCCTTGCTCCACAGGACAAAGGCTACTTTGTTTTGAATGATGTTCTTAGGTATGCAGAACAAGTGGAGACTGATAACAGTTCAGAAATGGTTAATGCGGTCAAGGATGTAGCACCCGTGCCTTTGACGCCTGATCCAGGTTGGATATTTTGTCTAATTCCACACTTTTCTTCTTTTTACTTTTCAAATTGCTTACTTGGCTTTTTTGTTTTGATTCTAGAACCAGTTCATGTGCTTCAGCCTTCGAATCACAGACAGCCTAGCTCTCATGCAGAAGATATAAAAATTGTTGAGGAAGTAGTTCATGGTTCTTTGGAAAATGAGAAGGTAGTTGGTGATGAAAGAGAGATTATGGTGGGTGCTGAATCCCATATTAATGCAGAACCAGCTACTTCAGTTTCCCGAGAAGATGCTCCTAAGAAATCTTATGCTTCAATTGTAAGTTCTCAAACAAAGAAAGGGCCCGCCAAAATCTATGTACCCTCTAATTCAAGAATGGCTCCCGCAAAGACTGAAAAGCAGCCAGTTAAGTCAGTGGCACAAGCTCCTGTTCCTGAATCATCAATTCATACTGCCTCTGGGGGTAATGCATCTGAATCTAAAGATGCTCAGTACAGAGGTATAATATCAAAAAATCTTTCACTTGCTTGAAATATATCATTCATTACTTTCATTTGTGAAGCATCCAACCGGGCTGCTATATTAGAATAGAACTTTCATATTTTATTATAGGATGTAAAGGAATGCTGAAGTACATAGACAAGTGTTTGAGTTTTTCTTCATACAATGAGCCGTTGCTACTACTTGCATGATCAAACTTAACAGTTTCTCCATTGGCTCTTTTTTTCTTATTGCTTACAATCTTCTTATTTATTGGTTCCAGCTGAGGGACACTCCATTTATATCCGCAATTTGCCTTTAAATGTTACTGTTGCTCAACTTGAGGTTGAATTTAAGAGATTTGGACCCATTATGCAAGGAGGCATACAAGTTAGAAGTAATAGGGTTAGTCCAGAAAACATACTTTTTACTCATTTGTCCTCCTCTCATCTACTTAATTTTATACTTAATTTTATAAATCTTTAATAATATCTATTGATTTCGTGTTTCTGCAGCAACAAGGATTCTGCTTCGGGTTTGTTGAATTTGAAGATTTGAACTCCATGAACAGCGCGATACAGGTTTGTCCCCTTCAAATAATTTTTTAGATAGCCATCTTCATGTGAAGTTAAAATTTGTCCAGCATCCCGATTATATGCTACAATTGTGTGTATGGAAGTGTGCCATGAAGTTTTAAATTGAAGAGATCTAGTATTTTAGGAACCATAAGTTTTCTTACTTTATTGAGTCTGTATAAAGTTGGCCCAAATTTGATGTTTCATCATGAATCTAAAACTAGGTTATAAACTTTCCCCATTTTATTTATCTGTTTTACGTGAAAACGTGTGTTATTATGGCGCTATGGTTACATTTGTCGGTTTCATGAGTTATATGTACGAATTTTTTATTCAGGCCTCACCTGTTACAATTGGAGGTCTTCAAGCTGAGCTTGAAATAAAGCGAACTACAAGTAGAGGTCAGTTACAGATTACAACTAACAAATTAGTCATCAATTTCTTCTCACTTTTATTTGTTTTGTTAAAATCTCTTTGTTTGGACCACAACTTCTTCACATAATTGATGCATGTGCATTTTCAATTTCCTATTGCAGTTGGTAGCGGGAGAGGTCGTTTCCCTACCGGAAGAGGAGCAGGGTACCGAAATGAAAATTTCAGGGGCCGCGGAAACTTTAGTGGTGCAGGTAGAGGATATGGTAGAAGTGATTTTAATGGAGGTCGTGGAGGACGAGGTGGTGAAAGTTACCAACAAGGAAGAGGGAGAGGCGGACGGAGAGGTGGCCTAAGCCAAATTCCTTCTTCAGCATAGAAGTTTTATGTTGCAAATTTTGACGGTGTTTCCTTCTTCAGCATAGAAGTTTTGTGTTGCAAATTTTGACCAAGCTTTGTGTTGCCATTGGCACCAACAGGTTAATTGTGCAGTTTAGTTTGATATTTTTCTTATTATAC</genome_strand>
        <mrna_strand>AAAGCTTGCCGACTCCTACTCATATCGTTCACTATTGAAGTTTAGTTTTTGGCTTAATTGTCAGTCCCTTTCATCGGCTTAACTACATAATAATAGTTGCTTCCGTAAAACTCATCAAATCTACAAAAATCTGTCTTCCTTTCGCTTTCTTCTAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCTGTCTCCCCATACTTGAGTCGAGGGATAAGGCTGCTTACACACTACAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGCTATGGAAACTACAGCTATACCTTCTGCCCCTGCTGCACAAGTGATCGGAAATGCTTTTGTTGAGCAGTATTACCAAATTCAACACCACTCCCCAGAGTTGGTATACAGATTTTGTCTGGATTCAAGTGTCTTAAGCCGCCCAAATTCTAATGGCGTGATGACATCCGTGACAACAATGAAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATATCAATGACATGATATGCTCATTAGGCTACAAGAATTATAAGGCAGAGATAAAGACTGCAGATGCACAACAGTCCTACAAGGATGGGGTCATTGTATTGGTTACTGGATGCTTAACTGGAAAAGATAACACGAGAAAGCAATTCACCCAGACTTTTTTCCTTGCTCCACAGGACAAAGGCTACTTTGTTTTGAATGATGTTCTTAGGTATGCAGAACAAGTGGAGACTGATAACAGTTCAGAAATGGTTAATGCGGTCAAGGATGTAGCACCCGTGCCTTTGACGCCTGATCCAG.................................................................................AACCAGTTCATGTGCTTCAGCCTTCGAATCACAGACAGCCTAGCTCTCATGCAGAAGATATAAAAATTGTTGAGGAAGTAGTTCATGGTTCTTTGGAAAATGAGAAGGTAGTTGGTGATGAAAGAGAGATTATGGTGGGTGCTGAATCCCATATTAATGCAGAACCAGCTACTTCAGTTTCCCGAGAAGATGCTCCTAAGAAATCTTATGCTTCAATTGTAAGTTCTCAAACAAAGAAAGGGCCCGCCAAAATCTATGTACCCTCTAATTCAAGAATGGCTCCCGCAAAGACTGAAAAGCAGCCAGTTAAGTCAGTGGCACAAGCTCCTGTTCCTGAATCATCAATTCATACTGCCTCTGGGGGTAATGCATCTGAATCTAAAGATGCTCAGTACAGAG........................................................................................................................................................................................................................................................................CTGAGGGACACTCCATTTATATCCGCAATTTGCCTTTAAATGTTACTGTTGCTCAACTTGAGGTTGAATTTAAGAGATTTGGACCCATTATGCAAGGAGGCATACAAGTTAGAAGTAATAGG..............................................................................................................CAACAAGGATTCTGCTTCGGGTTTGTTGAATTTGAAGATTTGAACTCCATGAACAGCGCGATACAG...........................................................................................................................................................................................................................................................................................................................................GCCTCACCTGTTACAATTGGAGGTCTTCAAGCTGAGCTTGAAATAAAGCGAACTACAAGTAAAG.......................................................................................................................................TTGGTAGCGGGAGAAGTCGTTTCCCTACCGGAAGAGGAGCAGGGTACCGAAATGAAAATTTCAGGGGCCGCGGAAACTTTAGTGGTGCAGGTAGAGGATATGGTAGAAGTGATTTTAATGGAGGTCGTGGAGGACGAGGTGGTGAAAGTTACCAACAAGGAAGAGGGAGAGGCGGACGGAGAGGTGGCCTAAGCCAAATTCCTTCTTCAGCATAGAAGTTTTATGTTGCAAATTTTGACGGTGTTTCCTTCTTCAGCATAGAAGTTTTGTGTTGCAAATTTTGACCAAGCTTTGTGTTGCCATTGGCACCAACAGGTTAATTGTGCAGTTTAGTTTGATATTTTTCTTATTATAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U597090" ref_strand="+" ref_description="SGN-U597090 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157356307|emb|CAO62459.1| (e_value=3e-43) unnamed; (*ATH) AT5G08060.1 (e_value=4e-40) | Symbol: None | expressed protein, sigma factor F inhibitor spoIIAB, Bacillus megaterium, PIR:B48402 | chr5:2580538-2582565 FORWARD | Aliases: T22D6.4; ">
      <seq>cgatttaggtccaattatccctacccaatttgaagacataacattaaaccgcaaaatcaaacagatctcattgagcaaatttcttcaatggcttcgtcagggaaatcgatgatccaaaccctaaaacggttcatgaagaagccatgggagttcaccggacctcaaacaagccccgagtatttagactctatacccaaggcagcggagtacagaatcttctgtcctgccactacccaatctcaggccatcatccccacatccgatcctgaaaccgtcttcgatatcaagtattattctcgtgaccagaggcgtaaccgtcctccaatcaagcgcactttcctcaccaaagctgatgttgagaagatgaggatggagtacaaatttgatgtcaacgattttcctaagccttatttgactgctaaggttgaagaggatgaaaatgctattggtggtggctaccagaaatgaaggctttgttcttgtggcgaagactccacttgctgtcaataatggtagctgatgatgttttgcagtgtcagccaagtgtattgcatatgtactccgttttttaaaaatgntgagatatatattcttggagcaatttcctttggttttagagtgataagtttcaccagtcgaataattttttttttcatttagcttnngcggattgttccatgtctngtgcttgaaanantgaaanttagtcnaacgtcgcanctgattagctatagtcngattttnat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="79663" stop="84802"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79963" g_stop="80432" g_length="470"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="470" r_length="470" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="80433" i_stop="84226" i_length="3794">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="84227" g_stop="84502" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="471" r_stop="746" r_length="276" r_score="0.960"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-U597090" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>746</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U597090" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79963" e_stop="80432"/>
          <exon e_start="84227" e_stop="84502"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGATTTAGGTCCAATTATCCCTACCCAATTTGAAGACATAACATTAAACCGCAAAATCAAACAGATCTCATTGAGCAAATTTCTTCAATGGCTTCGTCAGGGAAATCGATGATCCAAACCCTAAAACGGTTCATGAAGAAGCCATGGGAGTTCACCGGACCTCAAACAAGCCCCGAGTATTTAGACTCTATACCCAAGGCAGCGGAGTACAGAATCTTCTGTCCTGCCACTACCCAATCTCAGGCCATCATCCCCACATCCGATCCTGAAACCGTCTTCGATATCAAGTATTATTCTCGTGACCAGAGGCGTAACCGTCCTCCAATCAAGCGCACTTTCCTCACCAAAGCTGATGTTGAGAAGATGAGGATGGAGTACAAATTTGATGTCAACGATTTTCCTAAGCCTTATTTGACTGCTAAGGTTGAAGAGGATGAAAATGCTATTGGTGGTGGCTACCAGAAATGAAGGTAATTTTTTTTATAATAATAATTGGGGTAGATGAACGAACTGAACTACTAATATTCCTCGAAATGAAGGTATTGTGATTCAATTTTAGGGGTTTTATTATAACCGTTTATCTATCATTGTTGGAAATTGAGTTTGTTATTTGAATAATCAAGCAATCATTATTTCAACCGCATATGCCTTTGTTATCATTGCTTTTGTACTATGTTTTATTTGGACCAATTTCATCCGATACTGATAAGTAATTTGCTTTCAGGGCACATCCAGAGTTCTCTAAGTCCTCATTGTTTCGTATAGATAGTATTTGAGCTGGATAGCTAGTGGTCCGATTTAGGAGGAATGTGGAACTTCTCTTCAATTACAATTGTTGGGGAGTTATCACATTTTTCTTGAATTGGTGTTTTCTTTGGTTCCTTTTCAGTAAAGACTTGTAGACATGTAATCTGAAGATGTTGTGTCCCCACTTGTTTTTAAGTGCTGTGGGTTTGGAGGAAAATGTTTTTTTTTTCATGTAAAAAATATTTCTATATCTTTTTGTGGTGTTTGGTTGATTATGAAAGAAGGTGACATATGGAAGTCATACAAGGTGTAGGATGGTGTATAGCTTGTGTTTGTGTGATATCTTCGAGTACTAAATGTTGAAGACGCTTAAGGGTTAATTGAGACAAGTGATATCATGTAAGAGTTGAGTTAGCTTTGGGAAGGAAATGGAATGTCATTTGATGTTGTAAGCACTTGACGAGATTTTATCTGTTCCCTCCCTCTCCTAGTGGGAAAGTAAAACGGGACGTAGTGGAAACTTTGGTAGCAGTCTGTAATGAGAACGTCAAATAGGTTTCAGAAATATGCTTTTTGGGGCTTACTTGAAATTAGATTAAAGGGAGAACTGTTTAGCTAGGTTTGTGCAATTTGAGAATTATTTTTTTCAGGAATATCTGTTGGGTGTTGGGAGTCTATCACATGAAACACAAGAGGTAAATCTAATCAACACATTGAGCTTCTGTTGCCTCCTTTAGCTGCTTCCTTCCTTGCTGCCCTTCTCAAAACTTAAGTTTTGATGGATGCATCCTCTCTTCTTTCCCTACTGTCATGAGCACCTTTGACCCCTGTTCTAGTTTTTCTTCCGTTTCCTTTTCTAATGTCCTCCCCTCTACGATTGTCTATGTTTCAAATTGGCGGCGAACCCCTACTTTCAACCGATTTAGAAGTTTCAAGTCTTCTCCTTTTTCCTTTTTTTACAGGAGAAAACTCCATATTACAGCAGATAATATTGGTGTTAATATCACCCAATTAAACATTCTGTTCAAAATTAACCACAACTGATACTTTTATCACACAAATAATGTGCTATTACGTGCCCACTTGTGCCTGAAAGACTTTAATTGCAAAAAACTGGCTTCATCTTTGGTATCACTTAATATCTACCCCAAATAGCACTAGTTGATAAGGTTTTGAAAGGGGATTAGCTTATTTTCGTTCTTTTTCCATAACCCGTTTGGGTATGAGTAGTTTGACGTTGTTTTATGCATTTTCTTCTTTTATCTTAAAGCACCAGATCATCTCTTAGTACGAACTAGAAATCATGTAGTGTCTGTTTCTTTGTTTGCTGTGTTGAACCATTGAAGAGGATGATTCAGGTGTGTCAATAGGTAATAGTGAGATAGGTTTGTCAAAATGAGGTTTATTATTCTAGTCAGCTTCTCTAATTTATTAAGAACTGTATAGAAAGTAAAGTTTGTTTTGCTTTCTTCTGATCGCACTAAACAAACATACAAGGGCAGATAAATGCTTTACTAGAGGGAAGTATAGTAATCCGTCCCCTTAGAAAAAGAGCGCAAGCTTTAAATAGCACAAATGGAGAAAAAGTACAAATATGAATTTTTAGTCCAAGACTTGAGATAATAAGCATGAATAACAAATATATGGCCAAAGAAGTTGAAAAAAATATATGGTAGAGTCAAAAGTGATATATCAATTGTTTAGTGTGACCGAGGCGCTTATTGGTAAGGAAAATATGTCTTAGAGCCTTAATGATGCTGAAGTGCACATCAAGCAATGCAACACGCTTAGCATATTTTGCGTCTCGCTTCAGTGCTTATGTGCGTCTTTGACAACACTGGGTCAGTTAAAAACAAATTATCTCGATGTATTTTTATAAACATGCAACTTTTCCTTATAAAAACATTTCATCAATGTTAACATTATAGTTGACATGGCAACTATTCGTTCTGATCAGATTTATAATTTGTTTTACTTAAGCTCAGATCAAGTTGACAGTGTTCTTTTGGGTAGAAAGGAACAGGAAAACTGAATTGGGAACTCTTAAAACTAATGGAACGATAGTAAGTTTTTTTTTTGATGAAATGAGGCATTTCATTGCTGGTATCAATAAAATTCAGAGTTACGAAAACAAGTAGATGATAGCTTCAGTAAAAAAAAACTAATAAATGGTAAAAGTTCTGTTTCATGCTAACAGGGTACATAGCTAGAATTGTCATATTTCAAAATGGTTGCGTCTTGATCTCTTTGTCTATGTAACTATGTAAATATAGTTATGTCCTTTAACTTCTGTTGATACTCGTCTAGATTAAAGTAGCCATTGAGATCTTTAAGGTACTTGAGAGTTATAAATTACAATTGGTTTGAGATAATGAACATATGAGAACCATGATAGAGTCGTTGTGATGGGATTGTGGTGTTATTTAATTTGTATAACTTGTCTGAAAAATTGCCATGCTATTTTCATTCTATAGCTAGTTTCTAGGAGATGATGAAAAAAGAGCAAACCAGCTGAAAGTATGTCTAGAATCCATGCTTGGTGGTGTTCTTAGGTTGAGGCAAGCAATGCAATAAACTAGGAACATTCACAGAATGTTGTGAGTGGTTTTAGCCCTCCAAGCCGTAAAATCTATTGTCCTTTTAGTTGTGTAAATGAGCTAAGCCAATCCTAACATTAGTCGGGTTCAGCTCACTTGGTGCATTAAGAGATGAGCTGAAGGTTGAGTCTAATCAAGCCCGAGCGCAAGACAGTCGGTTCAGTTTCTTTTTTTGGTTGATAACGGTGGTGTGAATCGTGTGATGTCGGGGCCAGCTTTCATGCACCTCGGTGTTGGGTCTGAGCTAAATATCTGCTCTGCAGGATGGTTAGCTTTTATCACAAACATTAATAACTATTACCCAAACTAGAAATGTTAAAAATAATGAAGACAACCTTAACAAAAATAATTATACGACTCTCATGTTTGGAAATGAGTTCTGCAAAGTGTTAACATATCCTTAAATCTTTAAACAATTGAAAAAATAGAAATAAATGCAATGCATCTGATGCTGAAATAAGACTCTGGATTTGTTGCATTTGTCTAATATCTGAGTCCATGAGAGATATAAAGGATGCTGGAGATAAGTAGGAGGGTTGTTTTATTACTAGCAATATATCTGTGCTAATTGTGCATCTGATTTTGATCTTAGGCCAATTAATGAGATAACTTTGGGATATTCCATAAAGTGAAGCTTATCTGCATTTTATAGCGACACCTTTTCATACATTTAATCCCCTGTTTAGTATTTGAATGGTCAAAGGATGACTAATTGTGCATAGAAATTATCTTTGCAGTTCCGGTAACAAAGAAAAAAAAGTGTTAGCTGCTGTAGCACCCCACAAAATGGAAAGAAGTAGTTTTTTTTTAATCTTTTCAAAACTGCTGTTTCTTTTATCGTCTTGGAGATATCAATTTGTTAACTGTGTGTTGATATTATCATATACAAATTCTAACTATTTGAACTCCCTCTCTACCAGGCTTTGTTCTTGTGGCGAAGACTCCACTTGCTGTCAATAATGGTAGCTGATGATGTTTTGCAGTGTCAGCCAAGTGTATTGCATATGTACTCCGTTTTTTAAAAATGTTGAGATATATATTCTTGGAGCAATTTCCTTTGGTTTTAGAGTGATAAGTTTCACCAGTCGAATAATTTTTTTTTTCATTTAGCTTATGCGGATTGTTCCATGTCTTGTGCTTGAAAGAGTGAAAGTTAGTCGAACGTCGCATCTGATTAGCTATAGTCTGATTTTGAT</genome_strand>
        <mrna_strand>CGATTTAGGTCCAATTATCCCTACCCAATTTGAAGACATAACATTAAACCGCAAAATCAAACAGATCTCATTGAGCAAATTTCTTCAATGGCTTCGTCAGGGAAATCGATGATCCAAACCCTAAAACGGTTCATGAAGAAGCCATGGGAGTTCACCGGACCTCAAACAAGCCCCGAGTATTTAGACTCTATACCCAAGGCAGCGGAGTACAGAATCTTCTGTCCTGCCACTACCCAATCTCAGGCCATCATCCCCACATCCGATCCTGAAACCGTCTTCGATATCAAGTATTATTCTCGTGACCAGAGGCGTAACCGTCCTCCAATCAAGCGCACTTTCCTCACCAAAGCTGATGTTGAGAAGATGAGGATGGAGTACAAATTTGATGTCAACGATTTTCCTAAGCCTTATTTGACTGCTAAGGTTGAAGAGGATGAAAATGCTATTGGTGGTGGCTACCAGAAATGAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTGTTCTTGTGGCGAAGACTCCACTTGCTGTCAATAATGGTAGCTGATGATGTTTTGCAGTGTCAGCCAAGTGTATTGCATATGTACTCCGTTTTTTAAAAATGNTGAGATATATATTCTTGGAGCAATTTCCTTTGGTTTTAGAGTGATAAGTTTCACCAGTCGAATAATTTTTTTTTTCATTTAGCTTNNGCGGATTGTTCCATGTCTNGTGCTTGAAANANTGAAANTTAGTCNAACGTCGCANCTGATTAGCTATAGTCNGATTTTNAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U583510" ref_strand="+" ref_description="SGN-U583510 Tomato 200607#2 [11 ESTs aligned] (*GB) gi|157356307|emb|CAO62459.1| (e_value=3e-43) unnamed; (*ATH) AT5G08060.1 (e_value=4e-40) | Symbol: None | expressed protein, sigma factor F inhibitor spoIIAB, Bacillus megaterium, PIR:B48402 | chr5:2580538-2582565 FORWARD | Aliases: T22D6.4; ">
      <seq>cgatttaggtccaattatccctacccaatttgaagacataacattaaaccgcaaaatcaaacagatctcattgagcaaatttcttcaatggcttcgtcagggaaatcgatgatccaaaccctaaaacggttcatgaagaagccatgggagttcaccggacctcaaacaagccccgagtatttagactctatacccaaggcagcggagtacagaatcttctgtcctgccactacccaatctcaggccatcatccccacatccgatcctgaaaccgtcttcgatatcaagtattattctcgtgaccagaggcgtaaccgtcctccaatcaagcgcactttcctcaccaaagctgatgttgagaagatgaggatggagtacaaatttgatgtcaacgattttcctaagccttatttgactgctaaggttgaagaggatgaaaatgctattggtggtggctaccagaaatgaaggctttgttcttgtggcgaagactccacttgctgtcaataatggtagctgatgatgttttgcagtgtcagccaagtgtattgcatatgtactccgttttttaaaaatgttgagatatatattcttggagcaatttcctttggttttagagtgataagtttcaccagtcgaataattttttttttcatttagcttatgcggattgttccatgtcttgtgcttgaaagagtgaaagttagtcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="79663" stop="84766"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79963" g_stop="80432" g_length="470"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="470" r_length="470" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="80433" i_stop="84226" i_length="3794">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="84227" g_stop="84466" g_length="240"/>
          <reference_exon_boundary r_type="cDNA" r_start="471" r_stop="710" r_length="240" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-U583510" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>710</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U583510" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79963" e_stop="80432"/>
          <exon e_start="84227" e_stop="84466"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGATTTAGGTCCAATTATCCCTACCCAATTTGAAGACATAACATTAAACCGCAAAATCAAACAGATCTCATTGAGCAAATTTCTTCAATGGCTTCGTCAGGGAAATCGATGATCCAAACCCTAAAACGGTTCATGAAGAAGCCATGGGAGTTCACCGGACCTCAAACAAGCCCCGAGTATTTAGACTCTATACCCAAGGCAGCGGAGTACAGAATCTTCTGTCCTGCCACTACCCAATCTCAGGCCATCATCCCCACATCCGATCCTGAAACCGTCTTCGATATCAAGTATTATTCTCGTGACCAGAGGCGTAACCGTCCTCCAATCAAGCGCACTTTCCTCACCAAAGCTGATGTTGAGAAGATGAGGATGGAGTACAAATTTGATGTCAACGATTTTCCTAAGCCTTATTTGACTGCTAAGGTTGAAGAGGATGAAAATGCTATTGGTGGTGGCTACCAGAAATGAAGGTAATTTTTTTTATAATAATAATTGGGGTAGATGAACGAACTGAACTACTAATATTCCTCGAAATGAAGGTATTGTGATTCAATTTTAGGGGTTTTATTATAACCGTTTATCTATCATTGTTGGAAATTGAGTTTGTTATTTGAATAATCAAGCAATCATTATTTCAACCGCATATGCCTTTGTTATCATTGCTTTTGTACTATGTTTTATTTGGACCAATTTCATCCGATACTGATAAGTAATTTGCTTTCAGGGCACATCCAGAGTTCTCTAAGTCCTCATTGTTTCGTATAGATAGTATTTGAGCTGGATAGCTAGTGGTCCGATTTAGGAGGAATGTGGAACTTCTCTTCAATTACAATTGTTGGGGAGTTATCACATTTTTCTTGAATTGGTGTTTTCTTTGGTTCCTTTTCAGTAAAGACTTGTAGACATGTAATCTGAAGATGTTGTGTCCCCACTTGTTTTTAAGTGCTGTGGGTTTGGAGGAAAATGTTTTTTTTTTCATGTAAAAAATATTTCTATATCTTTTTGTGGTGTTTGGTTGATTATGAAAGAAGGTGACATATGGAAGTCATACAAGGTGTAGGATGGTGTATAGCTTGTGTTTGTGTGATATCTTCGAGTACTAAATGTTGAAGACGCTTAAGGGTTAATTGAGACAAGTGATATCATGTAAGAGTTGAGTTAGCTTTGGGAAGGAAATGGAATGTCATTTGATGTTGTAAGCACTTGACGAGATTTTATCTGTTCCCTCCCTCTCCTAGTGGGAAAGTAAAACGGGACGTAGTGGAAACTTTGGTAGCAGTCTGTAATGAGAACGTCAAATAGGTTTCAGAAATATGCTTTTTGGGGCTTACTTGAAATTAGATTAAAGGGAGAACTGTTTAGCTAGGTTTGTGCAATTTGAGAATTATTTTTTTCAGGAATATCTGTTGGGTGTTGGGAGTCTATCACATGAAACACAAGAGGTAAATCTAATCAACACATTGAGCTTCTGTTGCCTCCTTTAGCTGCTTCCTTCCTTGCTGCCCTTCTCAAAACTTAAGTTTTGATGGATGCATCCTCTCTTCTTTCCCTACTGTCATGAGCACCTTTGACCCCTGTTCTAGTTTTTCTTCCGTTTCCTTTTCTAATGTCCTCCCCTCTACGATTGTCTATGTTTCAAATTGGCGGCGAACCCCTACTTTCAACCGATTTAGAAGTTTCAAGTCTTCTCCTTTTTCCTTTTTTTACAGGAGAAAACTCCATATTACAGCAGATAATATTGGTGTTAATATCACCCAATTAAACATTCTGTTCAAAATTAACCACAACTGATACTTTTATCACACAAATAATGTGCTATTACGTGCCCACTTGTGCCTGAAAGACTTTAATTGCAAAAAACTGGCTTCATCTTTGGTATCACTTAATATCTACCCCAAATAGCACTAGTTGATAAGGTTTTGAAAGGGGATTAGCTTATTTTCGTTCTTTTTCCATAACCCGTTTGGGTATGAGTAGTTTGACGTTGTTTTATGCATTTTCTTCTTTTATCTTAAAGCACCAGATCATCTCTTAGTACGAACTAGAAATCATGTAGTGTCTGTTTCTTTGTTTGCTGTGTTGAACCATTGAAGAGGATGATTCAGGTGTGTCAATAGGTAATAGTGAGATAGGTTTGTCAAAATGAGGTTTATTATTCTAGTCAGCTTCTCTAATTTATTAAGAACTGTATAGAAAGTAAAGTTTGTTTTGCTTTCTTCTGATCGCACTAAACAAACATACAAGGGCAGATAAATGCTTTACTAGAGGGAAGTATAGTAATCCGTCCCCTTAGAAAAAGAGCGCAAGCTTTAAATAGCACAAATGGAGAAAAAGTACAAATATGAATTTTTAGTCCAAGACTTGAGATAATAAGCATGAATAACAAATATATGGCCAAAGAAGTTGAAAAAAATATATGGTAGAGTCAAAAGTGATATATCAATTGTTTAGTGTGACCGAGGCGCTTATTGGTAAGGAAAATATGTCTTAGAGCCTTAATGATGCTGAAGTGCACATCAAGCAATGCAACACGCTTAGCATATTTTGCGTCTCGCTTCAGTGCTTATGTGCGTCTTTGACAACACTGGGTCAGTTAAAAACAAATTATCTCGATGTATTTTTATAAACATGCAACTTTTCCTTATAAAAACATTTCATCAATGTTAACATTATAGTTGACATGGCAACTATTCGTTCTGATCAGATTTATAATTTGTTTTACTTAAGCTCAGATCAAGTTGACAGTGTTCTTTTGGGTAGAAAGGAACAGGAAAACTGAATTGGGAACTCTTAAAACTAATGGAACGATAGTAAGTTTTTTTTTTGATGAAATGAGGCATTTCATTGCTGGTATCAATAAAATTCAGAGTTACGAAAACAAGTAGATGATAGCTTCAGTAAAAAAAAACTAATAAATGGTAAAAGTTCTGTTTCATGCTAACAGGGTACATAGCTAGAATTGTCATATTTCAAAATGGTTGCGTCTTGATCTCTTTGTCTATGTAACTATGTAAATATAGTTATGTCCTTTAACTTCTGTTGATACTCGTCTAGATTAAAGTAGCCATTGAGATCTTTAAGGTACTTGAGAGTTATAAATTACAATTGGTTTGAGATAATGAACATATGAGAACCATGATAGAGTCGTTGTGATGGGATTGTGGTGTTATTTAATTTGTATAACTTGTCTGAAAAATTGCCATGCTATTTTCATTCTATAGCTAGTTTCTAGGAGATGATGAAAAAAGAGCAAACCAGCTGAAAGTATGTCTAGAATCCATGCTTGGTGGTGTTCTTAGGTTGAGGCAAGCAATGCAATAAACTAGGAACATTCACAGAATGTTGTGAGTGGTTTTAGCCCTCCAAGCCGTAAAATCTATTGTCCTTTTAGTTGTGTAAATGAGCTAAGCCAATCCTAACATTAGTCGGGTTCAGCTCACTTGGTGCATTAAGAGATGAGCTGAAGGTTGAGTCTAATCAAGCCCGAGCGCAAGACAGTCGGTTCAGTTTCTTTTTTTGGTTGATAACGGTGGTGTGAATCGTGTGATGTCGGGGCCAGCTTTCATGCACCTCGGTGTTGGGTCTGAGCTAAATATCTGCTCTGCAGGATGGTTAGCTTTTATCACAAACATTAATAACTATTACCCAAACTAGAAATGTTAAAAATAATGAAGACAACCTTAACAAAAATAATTATACGACTCTCATGTTTGGAAATGAGTTCTGCAAAGTGTTAACATATCCTTAAATCTTTAAACAATTGAAAAAATAGAAATAAATGCAATGCATCTGATGCTGAAATAAGACTCTGGATTTGTTGCATTTGTCTAATATCTGAGTCCATGAGAGATATAAAGGATGCTGGAGATAAGTAGGAGGGTTGTTTTATTACTAGCAATATATCTGTGCTAATTGTGCATCTGATTTTGATCTTAGGCCAATTAATGAGATAACTTTGGGATATTCCATAAAGTGAAGCTTATCTGCATTTTATAGCGACACCTTTTCATACATTTAATCCCCTGTTTAGTATTTGAATGGTCAAAGGATGACTAATTGTGCATAGAAATTATCTTTGCAGTTCCGGTAACAAAGAAAAAAAAGTGTTAGCTGCTGTAGCACCCCACAAAATGGAAAGAAGTAGTTTTTTTTTAATCTTTTCAAAACTGCTGTTTCTTTTATCGTCTTGGAGATATCAATTTGTTAACTGTGTGTTGATATTATCATATACAAATTCTAACTATTTGAACTCCCTCTCTACCAGGCTTTGTTCTTGTGGCGAAGACTCCACTTGCTGTCAATAATGGTAGCTGATGATGTTTTGCAGTGTCAGCCAAGTGTATTGCATATGTACTCCGTTTTTTAAAAATGTTGAGATATATATTCTTGGAGCAATTTCCTTTGGTTTTAGAGTGATAAGTTTCACCAGTCGAATAATTTTTTTTTTCATTTAGCTTATGCGGATTGTTCCATGTCTTGTGCTTGAAAGAGTGAAAGTTAGTCG</genome_strand>
        <mrna_strand>CGATTTAGGTCCAATTATCCCTACCCAATTTGAAGACATAACATTAAACCGCAAAATCAAACAGATCTCATTGAGCAAATTTCTTCAATGGCTTCGTCAGGGAAATCGATGATCCAAACCCTAAAACGGTTCATGAAGAAGCCATGGGAGTTCACCGGACCTCAAACAAGCCCCGAGTATTTAGACTCTATACCCAAGGCAGCGGAGTACAGAATCTTCTGTCCTGCCACTACCCAATCTCAGGCCATCATCCCCACATCCGATCCTGAAACCGTCTTCGATATCAAGTATTATTCTCGTGACCAGAGGCGTAACCGTCCTCCAATCAAGCGCACTTTCCTCACCAAAGCTGATGTTGAGAAGATGAGGATGGAGTACAAATTTGATGTCAACGATTTTCCTAAGCCTTATTTGACTGCTAAGGTTGAAGAGGATGAAAATGCTATTGGTGGTGGCTACCAGAAATGAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTGTTCTTGTGGCGAAGACTCCACTTGCTGTCAATAATGGTAGCTGATGATGTTTTGCAGTGTCAGCCAAGTGTATTGCATATGTACTCCGTTTTTTAAAAATGTTGAGATATATATTCTTGGAGCAATTTCCTTTGGTTTTAGAGTGATAAGTTTCACCAGTCGAATAATTTTTTTTTTCATTTAGCTTATGCGGATTGTTCCATGTCTTGTGCTTGAAAGAGTGAAAGTTAGTCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U597092" ref_strand="+" ref_description="SGN-U597092 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>ttgaagacataacattaaaccgcaaaatcaaacagatctcattgagcaaatttcttcaatggcttcgtcagggaaatcnatgatnnaaaccctaaaacggttcatgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="79692" stop="80399"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79992" g_stop="80099" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="108" r_length="108" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-U597092" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>108</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U597092" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79992" e_stop="80099"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGAAGACATAACATTAAACCGCAAAATCAAACAGATCTCATTGAGCAAATTTCTTCAATGGCTTCGTCAGGGAAATCGATGATCCAAACCCTAAAACGGTTCATGAA</genome_strand>
        <mrna_strand>TTGAAGACATAACATTAAACCGCAAAATCAAACAGATCTCATTGAGCAAATTTCTTCAATGGCTTCGTCAGGGAAATCNATGATNNAAACCCTAAAACGGTTCATGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U591146" ref_strand="+" ref_description="SGN-U591146 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>gctagagtacgccatcggaatgatctccgatcaaaaccctaaacccccgtatcagttatgccgccgatctagctgcttcttccatacgtgaaaaagagtaactcagagaacttgatgcagtcaggttttcttaaatttctcgcatgtattcttttatagaaaaatcaagaactcttaagttacattcatataaaaatagaaactgtagttttcttgaatatattggcattgcaaatatcaaggaatttcaagaaattaggttgttattctcgcagtgtatgttaagtatgttaaggatgttcaagaattgaatggaatggntgtggagttgttcttgaactcaaaaacaaaaattaagtagtttaattataggagtttgtgatttgtagtaatttgaatgaagacactcaattggacagactttcagaaaggtttgtgtaatgcaagagaatagagaatatatggttcatcttttctgattttgttaaaacaaaaattaagtagtttaattatacgagtttgtgatttgtagtaatttgaatgaagacactcaattggacagactttcatgaaggtttgtgtaatgtaagagaatagagaatatatggttcatcttttctgattttgttaaaacaaaaattaagtagtttaattatacgagtgtgtgatttgtagtaaattgaatgaagacactcaattggacagactttcagaaaagtttgtgtaatgcaagagaatagaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="85294" stop="86634"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85593" g_stop="86334" g_length="742"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="743" r_length="743" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-U591146" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>742</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U591146" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85593" e_stop="86334"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTAGAGTACGCCATCGGAATGATCTCCGATCAAAACCCTAAACCCCCGTATCAGTTATGCCGCCGATCTAGCTGCTTCTTCCATACGTGAAAAAGAGTAACTCAGAGAACTTGATGCAGTCAGGTTTTCTTAAATTTCTCGCATGTATTCTTTTATAGAAAAATCAAGAACTCTTAAGTTACATTCATATAAAAATAGAAACTGTAGTTTTCTTGAATATATTGGCATTGCAAATATCAAGGAATTTCAAGAAATTAGGTTGTTATTCTCGCAGTGTATGTTAAGTATGTTAAGGATGTTCAAGAATTGAATGGAAT-GTTGTGGAGTTGTTCTTGAACTCAAAAACAAAAATTAAGTAGTTTAATTATAGGAGTTTGTGATTTGTAGTAATTTGAATGAAGACACTCAATTGGACAGACTTTCAGAAAGGTTTGTGTAATGCAAGAGAATAGAGAATATATGGTTCATCTTTTCTGATTTTGTTAAAACAAAAATTAAGTAGTTTAATTATACGAGTTTGTGATTTGTAGTAATTTGAATGAAGACACTCAATTGGACAGACTTTCATGAAGGTTTGTGTAATGTAAGAGAATAGAGAATATATGGTTCATCTTTTCTGATTTTGTTAAAACAAAAATTAAGTAGTTTAATTATACGAGTGTGTGATTTGTAGTAATTTGAATGAAGACACTCAATTGGACAGACTTTCAGAAAGGTTTGTGTAATGCAAGAGAATAGAGA</genome_strand>
        <mrna_strand>GCTAGAGTACGCCATCGGAATGATCTCCGATCAAAACCCTAAACCCCCGTATCAGTTATGCCGCCGATCTAGCTGCTTCTTCCATACGTGAAAAAGAGTAACTCAGAGAACTTGATGCAGTCAGGTTTTCTTAAATTTCTCGCATGTATTCTTTTATAGAAAAATCAAGAACTCTTAAGTTACATTCATATAAAAATAGAAACTGTAGTTTTCTTGAATATATTGGCATTGCAAATATCAAGGAATTTCAAGAAATTAGGTTGTTATTCTCGCAGTGTATGTTAAGTATGTTAAGGATGTTCAAGAATTGAATGGAATGGNTGTGGAGTTGTTCTTGAACTCAAAAACAAAAATTAAGTAGTTTAATTATAGGAGTTTGTGATTTGTAGTAATTTGAATGAAGACACTCAATTGGACAGACTTTCAGAAAGGTTTGTGTAATGCAAGAGAATAGAGAATATATGGTTCATCTTTTCTGATTTTGTTAAAACAAAAATTAAGTAGTTTAATTATACGAGTTTGTGATTTGTAGTAATTTGAATGAAGACACTCAATTGGACAGACTTTCATGAAGGTTTGTGTAATGTAAGAGAATAGAGAATATATGGTTCATCTTTTCTGATTTTGTTAAAACAAAAATTAAGTAGTTTAATTATACGAGTGTGTGATTTGTAGTAAATTGAATGAAGACACTCAATTGGACAGACTTTCAGAAAAGTTTGTGTAATGCAAGAGAATAGAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U593308" ref_strand="+" ref_description="SGN-U593308 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>tcggattgatctccgatcaaaaccctaggcccccgtatcagttatgccgccgatctagctgcttcttccatacgtgaaaaagagtaactcagagaacttgatgcagtcaggttttcttaaatttctcgcatgtattcttttatagaaaaatcaagaactcttaagttacattcatataaaaatagaaactgtagttttcttgaatatattggcattgcaaatatcaaggaatttcaagaaattaggttgttattctcgcagtgtatgttaagtatgttaaggatgttcaagaattgaatggaatgttgtggagttgttcttgaactcaaaaacaaaaattaagtagtttaattataggagtttgtgatttgtagtaatttgaatgaagacactcaattggacagactttcagaaaggtttgtgtaatgcaagagaatagagaatatatggttcatcttttctgattttgttaaaacaaaaattaagtagtttaattatacgagtttgtgatttgtagtaatttgaatgaagacactcaattggacagactttcatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="85307" stop="86462"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85607" g_stop="86162" g_length="556"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="556" r_length="556" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-U593308" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>556</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U593308" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85607" e_stop="86162"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGGAATGATCTCCGATCAAAACCCTAAACCCCCGTATCAGTTATGCCGCCGATCTAGCTGCTTCTTCCATACGTGAAAAAGAGTAACTCAGAGAACTTGATGCAGTCAGGTTTTCTTAAATTTCTCGCATGTATTCTTTTATAGAAAAATCAAGAACTCTTAAGTTACATTCATATAAAAATAGAAACTGTAGTTTTCTTGAATATATTGGCATTGCAAATATCAAGGAATTTCAAGAAATTAGGTTGTTATTCTCGCAGTGTATGTTAAGTATGTTAAGGATGTTCAAGAATTGAATGGAATGTTGTGGAGTTGTTCTTGAACTCAAAAACAAAAATTAAGTAGTTTAATTATAGGAGTTTGTGATTTGTAGTAATTTGAATGAAGACACTCAATTGGACAGACTTTCAGAAAGGTTTGTGTAATGCAAGAGAATAGAGAATATATGGTTCATCTTTTCTGATTTTGTTAAAACAAAAATTAAGTAGTTTAATTATACGAGTTTGTGATTTGTAGTAATTTGAATGAAGACACTCAATTGGACAGACTTTCATG</genome_strand>
        <mrna_strand>TCGGATTGATCTCCGATCAAAACCCTAGGCCCCCGTATCAGTTATGCCGCCGATCTAGCTGCTTCTTCCATACGTGAAAAAGAGTAACTCAGAGAACTTGATGCAGTCAGGTTTTCTTAAATTTCTCGCATGTATTCTTTTATAGAAAAATCAAGAACTCTTAAGTTACATTCATATAAAAATAGAAACTGTAGTTTTCTTGAATATATTGGCATTGCAAATATCAAGGAATTTCAAGAAATTAGGTTGTTATTCTCGCAGTGTATGTTAAGTATGTTAAGGATGTTCAAGAATTGAATGGAATGTTGTGGAGTTGTTCTTGAACTCAAAAACAAAAATTAAGTAGTTTAATTATAGGAGTTTGTGATTTGTAGTAATTTGAATGAAGACACTCAATTGGACAGACTTTCAGAAAGGTTTGTGTAATGCAAGAGAATAGAGAATATATGGTTCATCTTTTCTGATTTTGTTAAAACAAAAATTAAGTAGTTTAATTATACGAGTTTGTGATTTGTAGTAATTTGAATGAAGACACTCAATTGGACAGACTTTCATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U580873" ref_strand="+" ref_description="SGN-U580873 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|157327197|emb|CAO14478.1| (e_value=4e-25) unnamed; ">
      <seq>tttatgaattctttatgttcctttgctgagctcttttaatgacgagggcatatgcccaatatgaagattaatactattgtttctcttctttaggttgatgctccattctagaccgttcttcttatgttagtttgtttataagctgtgtaatcgtactttgaacttgaaccaactttccaccagatatctgctgctatggcatagggatctgctatgtgactgtttctacatcttctgtctatgcttccttttgctccggccattttatcatggcttcgtatgcttgctttacaccagctacatcaaaaatacaaccattaagatgaattgcatactttcccagcaagttttggctttaaaggagaggctcagtgggtttctttgttggaaatcgtcactaaaactcactggaagccaaatggatatcgcaggtttttcagggcaagtgtttgtaccttggaattgaagatcgtagacaaaatgttggtgcaacagtcttggaagtccaaagaggatcttgcattctctgcaagagtcttgtctaagaaccacccttgtgcatccgagtgtctccctcaaaattgttgatattgaaagtgaggatgtcttagtttgcacgtgtgcttcaccttttccgttgccgctattgtatagtgngtttgacattcttcttagttcccttgacaaattgaatgcaagtgatggttcattcaagctctcaagatacgtctcnnntcctgatgttttcacagtgtangtatacagtccccaattgatggataaaganangcaataagtcttcttttctacaccctactcaatcnnatgtactctngtgacgtctgangg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="86824" stop="88572"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="87124" g_stop="87545" g_length="422"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="440" r_length="440" r_score="0.846"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="87546" i_stop="87637" i_length="92">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="87638" g_stop="87692" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="441" r_stop="495" r_length="55" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="87693" i_stop="87844" i_length="152">
            <donor d_prob="0.926" d_score="1.00"/>
            <acceptor a_prob="0.936" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="87845" g_stop="87946" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="496" r_stop="597" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="87947" i_stop="88020" i_length="74">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.811" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="88021" g_stop="88272" g_length="252"/>
          <reference_exon_boundary r_type="cDNA" r_start="598" r_stop="849" r_length="252" r_score="0.956"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-U580873" ref_strand="+">
        <total_alignment_score>0.909</total_alignment_score>
        <cumulative_length_of_scored_exons>831</cumulative_length_of_scored_exons>
        <coverage percentage="0.979" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U580873" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="87124" e_stop="87545"/>
          <exon e_start="87638" e_stop="87692"/>
          <exon e_start="87845" e_stop="87946"/>
          <exon e_start="88021" e_stop="88272"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAATGAATTCTTTATGTTCTTTTGTTAACTTCTTTTGATGACGAGGGCATATGCTTAATATGAAAATTAATACTATTGTTTCTTTTCTTTAGGTTGATACTCCATTCTAGACTAATCTTCTTATGTTTGTTTGTTTATAAGCTGTGTAATCGTACTTTGAACTTGAACCAACTTTCCACCAGATA--T-CTGC--T-GC-T----A--TG-----TGACTGTTTCTACATCTTCTGTTTATGCTTCCTTTTTGTCCGGTCATTTTATCATGGTTTCGTATGCTCGCTTTACACCAGCTACA-CCAAAATACAACCATTAAGATGAATTGCATACTTCCCCAGCAAGTTTTGGCTTTAAAGGAGAGGCTCAGTGGCGTTCCTTTGTTGGAAATCGTCACTAAAACTCACCGGAAGCCAAATGGATATCGCAGGTTTTTCAGGTAAAGTTCTTATGGTTTTTAGTTCATAGCATCCATTAGAATAGGTGTAAAACTACTAACTTGGTCTTTAATCTTGCCATTGCATATGGGAGGGCAAGTGTTTGTACCTTGGAATTGAAGATCGTAGACAAAATGTTGGTGCAACAGGTAATTCTGTATAACCCATTCAAAGGAAGAAAATGCATTCCAAGTACTTCAAGTTTTCTCACAATTGAAACAAATAAAATATATTGATTTATATACTTTGTACTTTTAAAGTTGTACGCTGTCCTTCCTGATCTTTTGGTTTGCATGTATAGTCTTGGAAGTCCAAAGAGGATCTTGCATTCTCTGCAAGAGTCTTGTCTAAGAACCACCCTTGTGCATCCGAGTGTCTCCCTCAAAATTGTTGATATTGAAAGGTCCGTCTTTGTATACCAGCTAACTTCAGGATATTTCCTGTCTAGTTTCTTAGATTTTGTAAGTTTGTGTGCAGTGAGGATGTCTTAGTTTGCACGTGTGCTTCACCTTTTCCGTTGCCGCTATTGTATAGTGGGTTTGACATTCTTCTTAGTTCCCTTGACAAATTGAATGCAAGTGATGGTTCATTCAAGCTCTCAAGATACGTCTCAGGTCCTGATGTTTTCACAGTGTAGGTATACAGTCCCCAATTGATGGATAAAGAGATGCAATAAGTCTTCTTTTCTACACCCTACTCAATCTTATGTACTCTTGTGACGTCTGACGG</genome_strand>
        <mrna_strand>TTTATGAATTCTTTATGTTCCTTTGCTGAGCTCTTTTAATGACGAGGGCATATGCCCAATATGAAGATTAATACTATTGTTTCTCTTCTTTAGGTTGATGCTCCATTCTAGACCGTTCTTCTTATGTTAGTTTGTTTATAAGCTGTGTAATCGTACTTTGAACTTGAACCAACTTTCCACCAGATATCTGCTGCTATGGCATAGGGATCTGCTATGTGACTGTTTCTACATCTTCTGTCTATGCTTCCTTTTGCTCCGGCCATTTTATCATGGCTTCGTATGCTTGCTTTACACCAGCTACATCAAAAATACAACCATTAAGATGAATTGCATACTTTCCCAGCAAGTTTTGGCTTTAAAGGAGAGGCTCAGTGG-GTTTCTTTGTTGGAAATCGTCACTAAAACTCACTGGAAGCCAAATGGATATCGCAGGTTTTTCAG............................................................................................GGCAAGTGTTTGTACCTTGGAATTGAAGATCGTAGACAAAATGTTGGTGCAACAG........................................................................................................................................................TCTTGGAAGTCCAAAGAGGATCTTGCATTCTCTGCAAGAGTCTTGTCTAAGAACCACCCTTGTGCATCCGAGTGTCTCCCTCAAAATTGTTGATATTGAAAG..........................................................................TGAGGATGTCTTAGTTTGCACGTGTGCTTCACCTTTTCCGTTGCCGCTATTGTATAGTGNGTTTGACATTCTTCTTAGTTCCCTTGACAAATTGAATGCAAGTGATGGTTCATTCAAGCTCTCAAGATACGTCTCNNNTCCTGATGTTTTCACAGTGTANGTATACAGTCCCCAATTGATGGATAAAGANANGCAATAAGTCTTCTTTTCTACACCCTACTCAATCNNATGTACTCTNGTGACGTCTGANGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U578184" ref_strand="+" ref_description="SGN-U578184 Tomato 200607#2 [15 ESTs aligned] (*GB) gi|212723920|ref|NP_001132439.1| (e_value=7e-12) hypothetical; (*ATH) AT1G30820.1 (e_value=8e-12)  Symbol: None | CTP synthase, putative / UTP--ammonia ligase, putative, similar to SP:P17812 CTP synthase (EC 6.3.4.2) (UTP--ammonia ligase) {Homo sapiens}; contains Pfam profile PF00117: glutamine amidotransferase class-I; similar to ESTs gb:AA66076... ; ">
      <seq>agttcacagggttcaaaatcgcatatgggtgtaccatgcgtcttggatcaagaagaacgtattttagagtcaaagattctaaatctgtaaaactatcaatgtcgcaaccggagctttgttgatgaaaggcaccgtcatagatatgaggtgaatcttgatatggtgcagaaatttgaagatgcttgtctttctttccctggcaaagatgaaagtgatcggtacatggaggtaatgttgcaataggaattgggacctgctatgttaaggtggatgacaatgggtggatggggactcacataaatggattgatgcttgaaatcgaggtaaaacagataagtcttacaaggaagaagaagtcatacaactcttccattttaccatggcaagaagttctttgccacgagtgagtcttcaagaaaggcagaaggaaataataatattaagacagttcatgatgtgttactcatgccagaaactagaactgtaaggagactgcatcattctacagaagctatctggctggagcttccacgacagtcatgagtcatcccatcaatgtgattaatcttcaacccatgacagtgtattttctgatggaaggccaagtgtgaaaatggaacctgtcaacatctgaaataacaattacaagctcaaggggagtgctcaagtacgcacaatggggagtcaaaagaagatattttgctatgaactggattaggaagctatcaatggcatgttatttatttgttagaaatgctgctcatcccagttcaacatttctactttgtgttccatatgtaggttaagagaggagtagtttgaattattatctcaaaaatgaaaataaaaagaagtttgaatgttggtatataccgtccttaagctgacttttctaaatgatgcttcacaatcaagctagaaaaagactaagcaagtgatgtcctaatgaaatggtgcactgaagagtgcactggcaggagtgagattcgatcttcacagattattcggtggggatgtgcttctgaaaagcatgatcctgagtccagattcctctgtcaaatcatacgttcaagtctgtcaattgatttctctcttgctcattgacagttggtgtgaactggaaatccagaaacgctgcgcacacccattcatctaatgtttttcctaaggatggtgatttcctggataataaattcagtgcttcaggtagctagctccagttgtagatcagacttcctgttaatttccagacgggaggaatctttaacaattgtagctggcagatcaacagagaatgtctcatttaaggaatctcttgtacttgataacagttcaaatgtaaagcatgagagaaggaaaccatttatgcagagcggttctttgcgcagaagcctcacacatgatgaatcatcttttgatagttatgaagatattaagtttgaaaaaagtaaggaaatatgatttgagaagttttgctggggcaaaactaagagcaaggcattgcagagtcaaaatagattcagaaaagtctgcattaaccaggacattctagaagaatacgatcatcggatggacttctttgaacagactgctgaaatgtatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="88325" stop="93357"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88625" g_stop="88722" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="98" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="88723" i_stop="88832" i_length="110">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="88833" g_stop="88881" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="99" r_stop="147" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="88882" i_stop="89027" i_length="146">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="89028" g_stop="89108" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="148" r_stop="228" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="89109" i_stop="89660" i_length="552">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.898" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="89661" g_stop="89711" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="229" r_stop="279" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="89712" i_stop="90826" i_length="1115">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.446" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="90827" g_stop="91019" g_length="193"/>
          <reference_exon_boundary r_type="cDNA" r_start="280" r_stop="472" r_length="193" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="91020" i_stop="91107" i_length="88">
            <donor d_prob="0.949" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="91108" g_stop="91235" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="473" r_stop="600" r_length="128" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="91236" i_stop="91315" i_length="80">
            <donor d_prob="0.885" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="91316" g_stop="91409" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="601" r_stop="694" r_length="94" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="91410" i_stop="92046" i_length="637">
            <donor d_prob="0.966" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="92047" g_stop="92799" g_length="753"/>
          <reference_exon_boundary r_type="cDNA" r_start="695" r_stop="1447" r_length="753" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="92800" i_stop="92901" i_length="102">
            <donor d_prob="0.514" d_score="1.00"/>
            <acceptor a_prob="0.637" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="92902" g_stop="93057" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="1448" r_stop="1603" r_length="156" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-U578184" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1603</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U578184" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88625" e_stop="88722"/>
          <exon e_start="88833" e_stop="88881"/>
          <exon e_start="89028" e_stop="89108"/>
          <exon e_start="89661" e_stop="89711"/>
          <exon e_start="90827" e_stop="91019"/>
          <exon e_start="91108" e_stop="91235"/>
          <exon e_start="91316" e_stop="91409"/>
          <exon e_start="92047" e_stop="92799"/>
          <exon e_start="92902" e_stop="93057"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTTCACAGGGTTCAAAATCGCATATGGGTGTACCATGCGTCTTGGATCAAGAAGAACGTATTTTAGAGTCAAAGATTCTAAATCTGTAAAACTATCAGTACTTCCTTTCCTCCAACCTCACTGCATTGGCTGTATCTTGATCTGTAGCCATTTTGGAGGACTTCTCCTATTGATATTACCAAGTGCCTAAACTATATTGTTTCTCAGATGTCGCAACCGGAGCTTTGTTGATGAAAGGCACCGTCATAGATATGAGGTTCAGCACTTTTTTTTCTTTAAATTTGGAATTGTGGTGTAACTACTGTGCATCTAGGTGGACAAGTTTAATAATTATATGTGGACCATAAGATGTGATGTCTTTAGTAAGGGATGCATGCCAAAAATTTATCCTGTGCTATGTAGGTGAATCTTGATATGGTGCAGAAATTTGAAGATGCTTGTCTTTCTTTCCCTGGCAAAGATGAAAGTGATCGGTACATGGAGGTGAGCCTTTTATATAATTGAAATTATGAAGTCATGATAGATATTCGTAGTGTTGTTGTTGATTTTATTATAATTATGAAGCCATTGAATGGGAAGATGTGGAGTTTTTCTTGTTGAAGGCCCCACTCACACTACACTAAAAAAAACAAGTAGTTTAATTATAAGATTGTGATTTGTAGTATTTTGACACTCGATGGGACAGGCTTTCCTGTACACCCTCAGTGGTCATTTTCTTTTACATGGTTTTGACCTTTCGATTTTGATTGTTCCTTAAAACTTGAAAATTGTGTCAAGTAAGAGAATGGGGAAGTATATGTTTTCTGATTTTGTTAACGCTTTGAGGATCAACGGAGGTGGGCTGCTGAGAAATATGTCAAGTCGTTCTTTAATGCAATTTTAATCGCTTAGAGTAGTTACACAGAAGGCAGTGATCGGTGAGGCTTTTCAATGAATCCTTATGTTCCTTGGTTTGCTACTTCTGATTACGATTATATGCTTGTTATTCTTATAAGTAGATTGCTCCTAGTTTGAACTTAACCCAGTTTCTATCAGGTAATGTTGCAATAGGAATTGGGACCTGCTATGTTAAGGTGGATGACAATGGTAAGTGTTAGTTTCTTTGACATTGTTCTAATGCATTTAATGTGCTGAAAGTTCTGCTCATTATATGACTTAATCATCTGTAGCTGTACCTTCTTTTGAAGGATCATTTGAGGTTGTACTTTCTTTTGAAGGATCTCGTGTTTCACGAGATGAACGAGTGCTGATGGAAAAAATTTGGTGATCTTTTTGCAAAATGTTGAACTGACATCATCTTTTCTATTGTATTGATACTGCTGTACATAATTTCTTTTGCGTGACAACTATGATGTTCATAATTGAATGCTTGTGGTAGTCTATAGGATTGCATACATTACTCAACTAATAGTTTGTTTGATAGTTTGTGTTCATTAGTATTCTTTCACAGATGTTGTTTTATTTATTGTTTGCGGTTTTATTTGTAATTGGGCAAACTTGTATGGCTGTACACCACAAAATTTTGATGCTTACACTTTGGTTTTACTTTATTGTATGGCGTTCATGAACATTGTTTCCTGGTTCTTCATTTGCAATAAAATACTTTCTATACCTGTACGGCCTGCCCAAAAAAAAGGGGGGGGACGGGGGATAAAATATAATTTTTGTTGACCACTTCTGTATGTAGAGAGATGTTTTGATTACTTAATCTAGCTGAAGTTGAGCTAGAACATACATATTCGTTTGTATGTATTATTTTCCCAGCTTATGGAGACAACATATAGGCCCGTTCTTTCATCTTGTATCATAGTTTCTTTTTGCCTGGCCATTTTAATTAAATAATGTTTTATATGCTTCCTTTACACCACCGACATCAAAATTCTGCCATTCAAATGTTATGCTTGCTTTCCCAGCATGTTTTGGCTTTAAAAGAGAGGTTTTGAGCTTTATTTCTAACCTTTTTTTGTTGGAAATTGTTACTAAAACCCATGGGATTCCAAATGGATATCGAAAGGTTTTAAAGGTAAAGTTCTTCTGAGATTTAGTTGGTAGTATCCATTAGGATAGGTATAAAACTACTAATCTGGTCTTTGTTTTTTCCATTGTTTACCGTATGACAAGTGTTTGTACCTTGGAATCAATTATTGTAGATAAGAAACTCTCAAGAATTATTTGATACCATGAGCTGTGCACTCCTCTAGGGTGGATGGGGACTCACATAAATGGATTGATGCTTGAAATCGAGGTAAAACAGATAAGTCTTACAAGGAAGAAGAAGTCATACAACTCTTCCATTTTACCATGGCAAGAAGTTCTTTGCCACGAGTGAGTCTTCAAGAAAGGCAGAAGGAAATAATAATATTAAGACAGTTCATGATGTGTTACTCATGCCAGGTAATTTGTCTTTTGTGCTTGTTTGTGTTAATAATCAATTATGACAGGAAGTGTGTGCAACTAATTAATGTTCTTTTCGATCATGCAGAAACTAGAACTGTAAGGAGACTGCATCATTCTACAGAAGCTATCTGGCTGGAGCTTCCACGACAGTCATGAGTCATCCCATCAATGTGATTAATCTTCAACCCATGACAGTGTATTTTCTGATGGAAGGTAATGTTATCAAATTTCTTGGGAGGGTTAGGTTCTTTCTGATATTAATTACTCACACGACCTGATGTTTCTCCCTTCAGGCCAAGTGTGAAAATGGAACCTGTCAACATCTGAAATAACAATTACAAGCTCAAGGGGAGTGCTCAAGTACGCACAATGGGGAGTCAAAAGAAGGTAGATCATTCTTGCCTTTTGTTCCTGACCTGAATAGGTGCTGAATTTTTTTAGTGCATGTTTCAGTCATACAGCTATTCCATTTTACCATGGCAAGAAGTTTCTTAGATTCTGGGACAAAATGCAGGGACTTCTGTCCAGTGATTAAATATGCTAACACTGTTAATCTTTGGTATTATTCTAGAGACTCGAGAGCTTTTGAGGATACTTTTTTATGCATCCTATGTTTCAAATGGTATCAGCTTACCTCTTTCAGTTTTTAGAGTTACTGAGTTAGTATCTTTTCTCTTCTTTGATGTAATAAAGAGAGAAATATATTAATGACATGGATCTTAGAGGAAGTTGCTTCGTTTGAACACTTTAAATCTACTTTAACGTTCTAACAGTTTTAATAAATACAAGAAATTGTTAATTAGAATGTGGGAGGATTAAGGAAAAGCGAGAATAGGCTCTGAAGAAGTGACAATTTTCATATTTTTCTTGACGAGCGGAGGAAGTGGGAGCACATGTAAACAGAAGACTGTGTTTAGTTCTTGGTTTTTGATTGCAGACCATGGAGTAGATCAAACCTGAGAACTGTTGCACTTTTTAGGATTACTGGATCTTGTTTCACTGATTACTTTGTCTGATAATGCAGATATTTTGCTATGAACTGGATTAGGAAGCTATCAATGGCATGTTATTTATTTGTTAGAAATGCTGCTCATCCCAGTTCAACATTTCTACTTTGTGTTCCATATGTAGGTTAAGAGAGGAGTAGTTTGAATTATTATCTCAAAAATGAAAATAAAAAGAAGTTTGAATGTTGGTATATACCGTCCTTAAGCTGACTTTTCTAAATGATGCTTCACAATCAAGCTAGAAAAAGACTAAGCAAGTGATGTCCTAATGAAATGGTGCACTGAAGAGTGCACTGGCAGGAGTGAGATTCGATCTTCACAGATTATTCGGTGGGGATGTGCTTCTGAAAAGCATGATCCTGAGTCCAGATTCCTCTGTCAAATCATACGTTCAAGTCTGTCAATTGATTTCTCTCTTGCTCATTGACAGTTGGTGTGAACTGGAAATCCAGAAACGCTGCGCACACCCATTCATCTAATGTTTTTCCTAAGGATGGTGATTTCCTGGATAATAAATTCAGTGCTTCAGGTAGCTAGCTCCAGTTGTAGATCAGACTTCCTGTTAATTTCCAGACGGGAGGAATCTTTAACAATTGTAGCTGGCAGATCAACAGAGAATGTCTCATTTAAGGAATCTCTTGTACTTGATAACAGTTCAAATGTAAAGCATGAGAGAAGGAAACCATTTATGCAGAGCGGTTCTTTGCGCAGAAGCCTCACACATGATGAATCATCTTTTGATAGTTATGAAGATATTAAGTTTGAAAAAAGTAAATACAGAACCAAACAAAATCACCTATAATATGATTTTAGTGTTGAATTTGAAGTAGCTGAGGATGTTAATCAGGTCTTAAATCATAGGTCTCTTTCAGGTAAGGAAATATGATTTGAGAAGTTTTGCTGGGGCAAAACTAAGAGCAAGGCATTGCAGAGTCAAAATAGATTCAGAAAAGTCTGCATTAACCAGGACATTCTAGAAGAATACGATCATCGGATGGACTTCTTTGAACAGACTGCTGAAATGTATG</genome_strand>
        <mrna_strand>AGTTCACAGGGTTCAAAATCGCATATGGGTGTACCATGCGTCTTGGATCAAGAAGAACGTATTTTAGAGTCAAAGATTCTAAATCTGTAAAACTATCA..............................................................................................................ATGTCGCAACCGGAGCTTTGTTGATGAAAGGCACCGTCATAGATATGAG..................................................................................................................................................GTGAATCTTGATATGGTGCAGAAATTTGAAGATGCTTGTCTTTCTTTCCCTGGCAAAGATGAAAGTGATCGGTACATGGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAATGTTGCAATAGGAATTGGGACCTGCTATGTTAAGGTGGATGACAATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGATGGGGACTCACATAAATGGATTGATGCTTGAAATCGAGGTAAAACAGATAAGTCTTACAAGGAAGAAGAAGTCATACAACTCTTCCATTTTACCATGGCAAGAAGTTCTTTGCCACGAGTGAGTCTTCAAGAAAGGCAGAAGGAAATAATAATATTAAGACAGTTCATGATGTGTTACTCATGCCAG........................................................................................AAACTAGAACTGTAAGGAGACTGCATCATTCTACAGAAGCTATCTGGCTGGAGCTTCCACGACAGTCATGAGTCATCCCATCAATGTGATTAATCTTCAACCCATGACAGTGTATTTTCTGATGGAAG................................................................................GCCAAGTGTGAAAATGGAACCTGTCAACATCTGAAATAACAATTACAAGCTCAAGGGGAGTGCTCAAGTACGCACAATGGGGAGTCAAAAGAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTTTGCTATGAACTGGATTAGGAAGCTATCAATGGCATGTTATTTATTTGTTAGAAATGCTGCTCATCCCAGTTCAACATTTCTACTTTGTGTTCCATATGTAGGTTAAGAGAGGAGTAGTTTGAATTATTATCTCAAAAATGAAAATAAAAAGAAGTTTGAATGTTGGTATATACCGTCCTTAAGCTGACTTTTCTAAATGATGCTTCACAATCAAGCTAGAAAAAGACTAAGCAAGTGATGTCCTAATGAAATGGTGCACTGAAGAGTGCACTGGCAGGAGTGAGATTCGATCTTCACAGATTATTCGGTGGGGATGTGCTTCTGAAAAGCATGATCCTGAGTCCAGATTCCTCTGTCAAATCATACGTTCAAGTCTGTCAATTGATTTCTCTCTTGCTCATTGACAGTTGGTGTGAACTGGAAATCCAGAAACGCTGCGCACACCCATTCATCTAATGTTTTTCCTAAGGATGGTGATTTCCTGGATAATAAATTCAGTGCTTCAGGTAGCTAGCTCCAGTTGTAGATCAGACTTCCTGTTAATTTCCAGACGGGAGGAATCTTTAACAATTGTAGCTGGCAGATCAACAGAGAATGTCTCATTTAAGGAATCTCTTGTACTTGATAACAGTTCAAATGTAAAGCATGAGAGAAGGAAACCATTTATGCAGAGCGGTTCTTTGCGCAGAAGCCTCACACATGATGAATCATCTTTTGATAGTTATGAAGATATTAAGTTTGAAAAAA......................................................................................................GTAAGGAAATATGATTTGAGAAGTTTTGCTGGGGCAAAACTAAGAGCAAGGCATTGCAGAGTCAAAATAGATTCAGAAAAGTCTGCATTAACCAGGACATTCTAGAAGAATACGATCATCGGATGGACTTCTTTGAACAGACTGCTGAAATGTATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U580291" ref_strand="+" ref_description="SGN-U580291 Tomato 200607#2 [12 ESTs aligned] ">
      <seq>gtgcactcctctagggtggatggggactcacataaatggattgatgcttgaaatcgaggtaaaacagataagtcttacaaggaagaagaagtcatacaactcttccattttaccatggcaagaagttctttgccacgagtgagtcttcaagaaaggcagaaggaaataataatattaagacagttcatgatgtgttactcatgccagaaactagaactgtaaggagactgcatcattctacagaagctatctggctggagcttccacgacagtcatgagtcatcccatcaatgtgattaatcttcaacccatgacagtgtattttctgatggaaggccaagtgtgaaaatggaacctgtcaacatctgaaataacaattacaagctcaaggggagtgctcaagtacgcacaatggggagtcaaaagaagggtggatggaactcgggtaaatggattgatacgggaaatcaaggtaaaacagatgagcttataggatgaagaggatcagaagaagtcattcagctcatccattttaccaaagcatggagaagttttttgccacaaatgagtcttcaagaaaagcagcagtaaataacatatattgtgactgttcgtgatgtgccacttatgccagaaactacagcgataaggagagtgcagcattctgcagaagctatctgctcggagcttccacatctatgtaatcaatcttcacccaagttgtggtgactgtgtattctctgatgaaaggccaagtatgaaaatgaaactagctaacatctggaataacaaattacaagctcaaaggggagtgtacaagtacactcaatggggattcaaaagaaggttctgtgtagctggggtgttggggcatctccaatccaaacacctaattttacaccaaatttggtgttaaccaaatttactgtaatcaactccaacctactgcatcgaaaaataatttattttctctcattattattattattattttttatttcatttatatttttttatttcataaaactttctctcttttttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="90513" stop="95703"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90813" g_stop="91019" g_length="207"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="207" r_length="207" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91020" i_stop="91107" i_length="88">
            <donor d_prob="0.949" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91108" g_stop="91235" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="208" r_stop="335" r_length="128" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91236" i_stop="91315" i_length="80">
            <donor d_prob="0.885" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91316" g_stop="91409" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="336" r_stop="429" r_length="94" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="91410" i_stop="93472" i_length="2063">
            <donor d_prob="0.966" d_score="1.00"/>
            <acceptor a_prob="0.431" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="93473" g_stop="93677" g_length="205"/>
          <reference_exon_boundary r_type="cDNA" r_start="430" r_stop="634" r_length="205" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="93678" i_stop="93766" i_length="89">
            <donor d_prob="0.886" d_score="1.00"/>
            <acceptor a_prob="0.900" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="93767" g_stop="93882" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="635" r_stop="750" r_length="116" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="93883" i_stop="93985" i_length="103">
            <donor d_prob="0.863" d_score="1.00"/>
            <acceptor a_prob="0.945" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="93986" g_stop="94081" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="751" r_stop="846" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="94082" i_stop="95208" i_length="1127">
            <donor d_prob="0.954" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="95209" g_stop="95404" g_length="196"/>
          <reference_exon_boundary r_type="cDNA" r_start="847" r_stop="1042" r_length="196" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-U580291" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>1042</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U580291" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90813" e_stop="91019"/>
          <exon e_start="91108" e_stop="91235"/>
          <exon e_start="91316" e_stop="91409"/>
          <exon e_start="93473" e_stop="93677"/>
          <exon e_start="93767" e_stop="93882"/>
          <exon e_start="93986" e_stop="94081"/>
          <exon e_start="95209" e_stop="95404"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGCACTCCTCTAGGGTGGATGGGGACTCACATAAATGGATTGATGCTTGAAATCGAGGTAAAACAGATAAGTCTTACAAGGAAGAAGAAGTCATACAACTCTTCCATTTTACCATGGCAAGAAGTTCTTTGCCACGAGTGAGTCTTCAAGAAAGGCAGAAGGAAATAATAATATTAAGACAGTTCATGATGTGTTACTCATGCCAGGTAATTTGTCTTTTGTGCTTGTTTGTGTTAATAATCAATTATGACAGGAAGTGTGTGCAACTAATTAATGTTCTTTTCGATCATGCAGAAACTAGAACTGTAAGGAGACTGCATCATTCTACAGAAGCTATCTGGCTGGAGCTTCCACGACAGTCATGAGTCATCCCATCAATGTGATTAATCTTCAACCCATGACAGTGTATTTTCTGATGGAAGGTAATGTTATCAAATTTCTTGGGAGGGTTAGGTTCTTTCTGATATTAATTACTCACACGACCTGATGTTTCTCCCTTCAGGCCAAGTGTGAAAATGGAACCTGTCAACATCTGAAATAACAATTACAAGCTCAAGGGGAGTGCTCAAGTACGCACAATGGGGAGTCAAAAGAAGGTAGATCATTCTTGCCTTTTGTTCCTGACCTGAATAGGTGCTGAATTTTTTTAGTGCATGTTTCAGTCATACAGCTATTCCATTTTACCATGGCAAGAAGTTTCTTAGATTCTGGGACAAAATGCAGGGACTTCTGTCCAGTGATTAAATATGCTAACACTGTTAATCTTTGGTATTATTCTAGAGACTCGAGAGCTTTTGAGGATACTTTTTTATGCATCCTATGTTTCAAATGGTATCAGCTTACCTCTTTCAGTTTTTAGAGTTACTGAGTTAGTATCTTTTCTCTTCTTTGATGTAATAAAGAGAGAAATATATTAATGACATGGATCTTAGAGGAAGTTGCTTCGTTTGAACACTTTAAATCTACTTTAACGTTCTAACAGTTTTAATAAATACAAGAAATTGTTAATTAGAATGTGGGAGGATTAAGGAAAAGCGAGAATAGGCTCTGAAGAAGTGACAATTTTCATATTTTTCTTGACGAGCGGAGGAAGTGGGAGCACATGTAAACAGAAGACTGTGTTTAGTTCTTGGTTTTTGATTGCAGACCATGGAGTAGATCAAACCTGAGAACTGTTGCACTTTTTAGGATTACTGGATCTTGTTTCACTGATTACTTTGTCTGATAATGCAGATATTTTGCTATGAACTGGATTAGGAAGCTATCAATGGCATGTTATTTATTTGTTAGAAATGCTGCTCATCCCAGTTCAACATTTCTACTTTGTGTTCCATATGTAGGTTAAGAGAGGAGTAGTTTGAATTATTATCTCAAAAATGAAAATAAAAAGAAGTTTGAATGTTGGTATATACCGTCCTTAAGCTGACTTTTCTAAATGATGCTTCACAATCAAGCTAGAAAAAGACTAAGCAAGTGATGTCCTAATGAAATGGTGCACTGAAGAGTGCACTGGCAGGAGTGAGATTCGATCTTCACAGATTATTCGGTGGGGATGTGCTTCTGAAAAGCATGATCCTGAGTCCAGATTCCTCTGTCAAATCATACGTTCAAGTCTGTCAATTGATTTCTCTCTTGCTCATTGACAGTTGGTGTGAACTGGAAATCCAGAAACGCTGCGCACACCCATTCATCTAATGTTTTTCCTAAGGATGGTGATTTCCTGGATAATAAATTCAGTGCTTCAGGTAGCTAGCTCCAGTTGTAGATCAGACTTCCTGTTAATTTCCAGACGGGAGGAATCTTTAACAATTGTAGCTGGCAGATCAACAGAGAATGTCTCATTTAAGGAATCTCTTGTACTTGATAACAGTTCAAATGTAAAGCATGAGAGAAGGAAACCATTTATGCAGAGCGGTTCTTTGCGCAGAAGCCTCACACATGATGAATCATCTTTTGATAGTTATGAAGATATTAAGTTTGAAAAAAGTAAATACAGAACCAAACAAAATCACCTATAATATGATTTTAGTGTTGAATTTGAAGTAGCTGAGGATGTTAATCAGGTCTTAAATCATAGGTCTCTTTCAGGTAAGGAAATATGATTTGAGAAGTTTTGCTGGGGCAAAACTAAGAGCAAGGCATTGCAGAGTCAAAATAGATTCAGAAAAGTCTGCATTAACCAGGACATTCTAGAAGAATACGATCATCGGATGGACTTCTTTGAACAGACTGCTGAAATGTATGATTCCGTCCTGCCATATTTTAGTCCAGAACCGCGTCTCTTCTGTCACCAGATATCGGGACCTGGTTTCGAGATGTTAATCCTTACATTGCTGAAAATGGGATTGAAACTTCTGTTGAACATGAAGTTGGTCTCACGTATATTTTTAGAAACATGGAACATAATTTCGTTGTTCCTGCCATAAATAATTTGAGAAAAGACGACTGCTTGTTCCCAAATCCTGCAAAATTTGATCTTGATTTGTATGCTTGTTCTAAAGAGGATATGGGGCAGTATAGGGGCTCTTGATGCGTGGGTTGTTTATAGTTCAGGTCCTTCTGAATTCTATTATGAAGGAGATGATTTGTCACTTTTACATTCTCATGGTGTAGATAACCTTAATAATTATTTGACACCACGAGCTATGCTCTCCTCTAGGGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAGTTTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACATATATTGTGACTGTTCGTGATGTGCCACTTATGCCAGGTAATTTGTCATTGAGTGCTTGTTTGTATTAATAATCAATGATGAAAGAAAATCTGGGCAACTAATTAATGTTCTTCTCTATCGTGCAGAAACTACAGCGATAAGGAGAGTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCACCCAAGTTGTGGTGACTGTGTATTCTCTGATGAAAGGTAGGTCATGTTATCAGCTTTGTTGGAAGGGTAAGGTATCTTTCTGATATTCTCTCCATCAAATAAGTTAGCAACTCACATAACCTGATGTCTCTTTCTTCAGGCCAAGTATGAAAATGAAACTAGCTAACATCTGGAATAACAAATTACAAGCTCAAAGGGGAGTGTACAAGTACACTCAATGGGGATTCAAAAGAAGGTAAACGATTCTCGCCATTTCCTGACCTGAATAACAGCTGAATTTTTCTAGTGCATGTTTTTCAGTTAATTAGCTTCATTTCTTCTTCTTTTTTGGGTAATAACTGTGAACTACTACCATTACTCCAACATGAAAACTTCAAATTTACAACCTAAAGAGCACCTATGGTCCCAACCACCTCTAAGAAGAGGTTTAGGACTATCCAGGTCTCAAACAAAACTGTTCCAGGAAAAAAAACCATAAGCTATTGCCAAATACAAACAAATTTATTCAGTTGATCTAAACTATTTGCTTTCTAGTTAATCTTCTCAGCAGATTCTGACACCACGCGGTTCCCCTTGTGTTCTGTAGAGTGGTATTCGAGCTCGCTTCTTTCTGTATTTGTACAATTGCACAACTTGTACTCACATCTATGCTTCGAAAAATCTTCCAATTCCTAGCTTTCCATGTGTGATGGATCATTGCCCCTCATACTGCCGCCAAAACTTCCTTTTGTATTTGCTTCCATTTCCTTCGTTTCAGCCATTTCAGACTTTGGGGCATCCTTCTAAATCATTTGGACCTCTGTCCAGTTTGCCAGACCATGTCAAACTGCAGTAATCCATTGACATTCGGAGAATAGGTGTTGAGGAGTTTCTATCATGCCTGCCAAACAGAGACAACACTTTGAGGAAATATCTGTGTTGGAACTTCATTTGATTGTTTGTTTAAGAGAGGAATTCCATATTATTAATGACTGCAGTATCTTTTCATTCGTTTAGGAATAATTTGGACCTGGAGCACAGTGCAAATAAATGCATGGAGCAACTCTCTATCTCTCTTCCACACACACACATGAAAAATAGTAAAACGGAACATATTGTATAGATTGAGGGTTTAAAGCCTTTCAAGTGTCGTTTGATCATTTTATGTTCTAATAGGGTTAATTAAGACAAGTGAATTACGAGTTGTAAATTTCTAAAGGTTTGCTCTTTGAATTATAAGGCTGAATAGGTTTTCAATTTAATTTGGAAAACTATTCACGACATCATTCATGTTTTAGGAAATACTTCACTATCTAACAATATTCCCTTGCACGTGTTTTGTAAGAAAATGATTGGTTCTTTTTTTCTTTTTTGGTAATGCAGGTTCTGTGTAGCTGGGGTGTTGGGGCATCTCCAATCCAAACACCTAATTTTACACCAAATTTGGTGTTAACCAAATTTACTGTAATCAACTCCAACCTACTGCATCGAAAAATAATTTATTTTCTCTCATTATTATTATTATTATTTTTTATTTCATTTATATTTTTTTATTTCATAAAACATTTTCTTTCTATGG</genome_strand>
        <mrna_strand>GTGCACTCCTCTAGGGTGGATGGGGACTCACATAAATGGATTGATGCTTGAAATCGAGGTAAAACAGATAAGTCTTACAAGGAAGAAGAAGTCATACAACTCTTCCATTTTACCATGGCAAGAAGTTCTTTGCCACGAGTGAGTCTTCAAGAAAGGCAGAAGGAAATAATAATATTAAGACAGTTCATGATGTGTTACTCATGCCAG........................................................................................AAACTAGAACTGTAAGGAGACTGCATCATTCTACAGAAGCTATCTGGCTGGAGCTTCCACGACAGTCATGAGTCATCCCATCAATGTGATTAATCTTCAACCCATGACAGTGTATTTTCTGATGGAAG................................................................................GCCAAGTGTGAAAATGGAACCTGTCAACATCTGAAATAACAATTACAAGCTCAAGGGGAGTGCTCAAGTACGCACAATGGGGAGTCAAAAGAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAGTTTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACATATATTGTGACTGTTCGTGATGTGCCACTTATGCCAG.........................................................................................AAACTACAGCGATAAGGAGAGTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCACCCAAGTTGTGGTGACTGTGTATTCTCTGATGAAAG.......................................................................................................GCCAAGTATGAAAATGAAACTAGCTAACATCTGGAATAACAAATTACAAGCTCAAAGGGGAGTGTACAAGTACACTCAATGGGGATTCAAAAGAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTGTGTAGCTGGGGTGTTGGGGCATCTCCAATCCAAACACCTAATTTTACACCAAATTTGGTGTTAACCAAATTTACTGTAATCAACTCCAACCTACTGCATCGAAAAATAATTTATTTTCTCTCATTATTATTATTATTATTTTTTATTTCATTTATATTTTTTTATTTCATAAAACTTTCTCTCTTTTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U590788" ref_strand="+" ref_description="SGN-U590788 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>aagcggaagctaccggagtatanaactcgccaccgtcncangaccggaacttcatacgcaaccggatgaaacccctaaaaccgaatcaattttcccgccgtcagcttcccatcatgttagaattcttgaaaaatctggtaactcgatggtactgtaagattttcttatccntatttaaaataatcaaagaaatcattctttattttganaaactcaatanatcttttctttcttgaaaaataanaatttgttttcacttctttaaggagagaggggatgaatgcccganactatttctgtcnaaggggttttcttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="98739" stop="99654"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="99039" g_stop="99354" g_length="316"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="316" r_length="316" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-U590788" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>316</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U590788" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="99039" e_stop="99354"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGCGGAAGCTACCGGAGTATAGAACTCGCCACCGTCGCAGGACCGGAACTTCATACGCAACCGGATGAAACCCCTAAAACCGAATCAATTTTCCCGCCGTCAGCTTCCCATCATGTTAGAATTCTTGAAAAATCTGGTAACTCGATGGTACTGTAAGATTTTCTTATCCATATTTAAAATAATCAAAGAAATCATTCTTTATTTTGAGAAACTCAATAAATCTTTTCTTTCTTGAAAAATAAGAATTTGTTTTCACTTCTTTAAGGAGAGAGGGGATGAATGCCCGAGACTATTTCTGTCAAAGGGGTTTTCTTG</genome_strand>
        <mrna_strand>AAGCGGAAGCTACCGGAGTATANAACTCGCCACCGTCNCANGACCGGAACTTCATACGCAACCGGATGAAACCCCTAAAACCGAATCAATTTTCCCGCCGTCAGCTTCCCATCATGTTAGAATTCTTGAAAAATCTGGTAACTCGATGGTACTGTAAGATTTTCTTATCCNTATTTAAAATAATCAAAGAAATCATTCTTTATTTTGANAAACTCAATANATCTTTTCTTTCTTGAAAAATAANAATTTGTTTTCACTTCTTTAAGGAGAGAGGGGATGAATGCCCGANACTATTTCTGTCNAAGGGGTTTTCTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U583598" ref_strand="+" ref_description="SGN-U583598 Tomato 200607#2 [3 ESTs aligned] ">
      <seq>gccggagccggagttccaattagcaataagagaaaaagaaaaaaagaagtgaaataagccttaaaaggccaaccccgagcttataaggaagaagatcagaataagtcattcaggtcattcattttacaaaagcatgaagttctttgccacgaatgagtcttcaagaatggtagcagtaactaacaaatattatgactgttcatgatgtgccgctcatgccaggagactgcagcagtctgcagaggctatctgctcggagcttccacatcaatataatcaatcttccacccaaagtcgtggtgatggtgtattctatgatgaaaggccaagtgtgaaaatgaaactagttaacatctggaacaacaaattacaagctcaaggagagtgtacaagtacacacaatggggagtcaatagaaggtgcaattatgcttggagatgcgttgttaccttcagcatgttctttcattggtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="103137" stop="104935"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="103436" g_stop="103657" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="222" r_length="222" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="103658" i_stop="103761" i_length="104">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="103762" g_stop="103863" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="223" r_stop="324" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="103864" i_stop="103962" i_length="99">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="103963" g_stop="104057" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="325" r_stop="419" r_length="95" r_score="0.989"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="104058" i_stop="104581" i_length="524">
            <donor d_prob="0.815" d_score="0.98"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="104582" g_stop="104635" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="420" r_stop="473" r_length="54" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-U583598" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>473</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U583598" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="103436" e_stop="103657"/>
          <exon e_start="103762" e_stop="103863"/>
          <exon e_start="103963" e_stop="104057"/>
          <exon e_start="104582" e_stop="104635"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCGGAGCCGGAGTTCCAATTAGCAATAAGAGAAAAAGAAAAAAAGAAGTGAAATAAGCCTTAAAAGGCCAACCCCGAGCTTATAAGGAAGAAGATCAGAATAAGTCATTCAGGTCATTCATTTTACAAAAGCATGAAGTTCTTTGCCACGAATGAGTCTTCAAGAATGGTAGCAGTAACTAACAAATATTATGACTGTTCATGATGTGCCGCTCATGCCAGGTAATTTGTCCTTGAGTGCTTGTTTGTATTAATAATCAATGATGCAGAAAATGTGCCCAACTAATTAATGTTCTTCTCCGTCGTGCTGAAACTACATATGTAAGGAGACTGCAGCAGTCTGCAGAGGCTATCTGCTCGGAGCTTCCACATCAATATAATCAATCTTCCACCCAAAGTCGTGGTGATGGTGTATTCTATGATGAAAGTTAGGTCGTGTTATCAACTTTCTTGGAAGGGTTAGGTCTCTTTCTGATAAGGAATCAATTATGTTAGTAACTCACACGGCCTGATGTTTCTCTCTGCAGGCCAAGTGTGAAAATGAAACTAGTTAACATCTGGAACAACAAATTACAAGCTCAAGGAGAGTGTACAAGTACACACGATGGGGAGTCAATAGAAGGTAAACCATTAGGCCATTCCTGCCATTTGTTCCTGTCCTGAATAAGAGCTGAAATTTTTCTAGTGCATGTTTCAGTTAATTAGCTTCATTTCTTTCACCCAATTTTTCAAGATTATCTTAAACTACATTCTTATTAATCATGAAAGCATTATAGATTACCATGTCTCGTTACATGCTTCCTGGGCCGCATAAACTCTTTCAAATTCCATCTGATCTTGTAATAGAATTGTTATGCCTGACATTTTTTACTTACAATTTCAGAATTCGCACCAACAAAAACTCAAAAAGTTTCTTATTTCTCGGACAAAATTTCAGAAGTTGCACCAAAAATTATTTTGAGATATTTTTCTTTATTCCTTTGTCTTTGTTTTCATTTGTGTTGGAACAATGACCCTGATATGGATGGAGTGGAAAAGATTCAAAGGAATGAGGATAAATATAACACGGCTACTAATTTTGGGGTGCAGCATAATTGATGGATTGGTGATGTTACCATTCTATTTATTTATTGTTTATTTTCGTAGGTGCAATTATGCTTGGAGATGCGTTGTTACCTTCAGCATGTTCTTTCATTGTTG</genome_strand>
        <mrna_strand>GCCGGAGCCGGAGTTCCAATTAGCAATAAGAGAAAAAGAAAAAAAGAAGTGAAATAAGCCTTAAAAGGCCAACCCCGAGCTTATAAGGAAGAAGATCAGAATAAGTCATTCAGGTCATTCATTTTACAAAAGCATGAAGTTCTTTGCCACGAATGAGTCTTCAAGAATGGTAGCAGTAACTAACAAATATTATGACTGTTCATGATGTGCCGCTCATGCCAG........................................................................................................GAGACTGCAGCAGTCTGCAGAGGCTATCTGCTCGGAGCTTCCACATCAATATAATCAATCTTCCACCCAAAGTCGTGGTGATGGTGTATTCTATGATGAAAG...................................................................................................GCCAAGTGTGAAAATGAAACTAGTTAACATCTGGAACAACAAATTACAAGCTCAAGGAGAGTGTACAAGTACACACAATGGGGAGTCAATAGAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCAATTATGCTTGGAGATGCGTTGTTACCTTCAGCATGTTCTTTCATTGGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U593829" ref_strand="+" ref_description="SGN-U593829 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>actgcccactgcagaacttcttcctacgctatactcaccaccgtcgcagaaccggaagctaccggagtatagaactcgccaccgtcgcagaagcggaacctaccggagtataaaactcgccaccgtcgcaggaccggaacatcatacgcaaccggatgaaaacccctaaaaccgaatcgattttcccgccgtcagcttcccatcatgttagaattcttgaaaaatctggtaactcgatggtacagagtaagattttcttatccatgtttaaagaaatcattcttttttttaagaaattcaagaaatcttttctttcttaaaaaatcaagaatttgtgtttacttctttaaggagagaggggatgaatgcccgagactatttctgtcaatggggttttcttggattattgcacaagtgttgttgactagttcttataaaacagagttgaatttctgtcaggggttttctgaatgatttcaccagggttattgatgagttgctttaaaacagactcaaatttctgtccgagttttcttgaatgattttaaaaaagcatcgatgctggtgccaccaagatgtactaatttaccccttcaaaggtattatatggaaagttgtggagttgttcttgaagccccattcgcacaattctagtttaattataa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="116326" stop="117590"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="116626" g_stop="117290" g_length="665"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="665" r_length="665" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-U593829" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>665</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U593829" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="116626" e_stop="117290"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTGCCCACTGCAGAACTTCTTCCTACGCTATACTCACCACCGTCGCAGAACCGGAAGCTACCGGAGTATAGAACTCGCCACCGTCGCAGAAGCGGAACCTACCGGAGTATAAAACTCGCCACCGTCGCAGGACCGGAACATCATACGCAACCGGATGAAAACCCCTAAAACCGAATCGATTTTCCCGCCGTCAGCTTCCCATCATGTTAGAATTCTTGAAAAATCTGGTAACTCGATGGTACAGAGTAAGATTTTCTTATCCATGTTTAAAGAAATCATTCTTTTTTTTAAGAAATTCAAGAAATCTTTTCTTTCTTAAAAAATCAAGAATTTGTGTTTACTTCTTTAAGGAGAGAGGGGATGAATGCCCGAGACTATTTCTGTCAATGGGGTTTTCTTGGATTATTGCACAAGTGTTGTTGACTAGTTCTTATAAAACAGAGTTGAATTTCTGTCAGGGGTTTTCTGAATGATTTCACCAGGGTTATTGATGAGTTGCTTTAAAACAGACTCAAATTTCTGTCCGAGTTTTCTTGAATGATTTTAAAAAAGCATCGATGCTGGTGCCACCAAGATGTACTAATTTACCCCTTCAAAGGTATTATATGGAAAGTTGTGGAGTTGTTCTTGAAGCCCCATTCGCACAATTCTAGTTTAATTATAA</genome_strand>
        <mrna_strand>ACTGCCCACTGCAGAACTTCTTCCTACGCTATACTCACCACCGTCGCAGAACCGGAAGCTACCGGAGTATAGAACTCGCCACCGTCGCAGAAGCGGAACCTACCGGAGTATAAAACTCGCCACCGTCGCAGGACCGGAACATCATACGCAACCGGATGAAAACCCCTAAAACCGAATCGATTTTCCCGCCGTCAGCTTCCCATCATGTTAGAATTCTTGAAAAATCTGGTAACTCGATGGTACAGAGTAAGATTTTCTTATCCATGTTTAAAGAAATCATTCTTTTTTTTAAGAAATTCAAGAAATCTTTTCTTTCTTAAAAAATCAAGAATTTGTGTTTACTTCTTTAAGGAGAGAGGGGATGAATGCCCGAGACTATTTCTGTCAATGGGGTTTTCTTGGATTATTGCACAAGTGTTGTTGACTAGTTCTTATAAAACAGAGTTGAATTTCTGTCAGGGGTTTTCTGAATGATTTCACCAGGGTTATTGATGAGTTGCTTTAAAACAGACTCAAATTTCTGTCCGAGTTTTCTTGAATGATTTTAAAAAAGCATCGATGCTGGTGCCACCAAGATGTACTAATTTACCCCTTCAAAGGTATTATATGGAAAGTTGTGGAGTTGTTCTTGAAGCCCCATTCGCACAATTCTAGTTTAATTATAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U580676" ref_strand="+" ref_description="SGN-U580676 Tomato 200607#2 [6 ESTs aligned] ">
      <seq>tcttgatttgtatgcttgtctaaaagaggatatggggcagtataggggctcttgatgcgtgggttgtttatagttcaggtccttctgaattctattatgaaggagatgatttgtcacttttacattctcatggtgtagataaccttaataattatttgacaccacgagctatgctctcctctagggtggatggaactcgggtaaatggattgatacgggaaatcaaggtaaaacagatgagcttataggatgaagaggatcagaagaagtcattcagctcatccattttaccaaagcatggagaagtttttgccacaaatgagtcttcaagaaaagcagcagtaaataacaaatattgtgactgttcgtgatgtgccacttatgccagaaactacagcgacaaggagactgcagcattctgcagaagctatctgctcggagcttccacatctatgtaatcaatcttcaccccaagttgtggtgactgtgtattgtctgatgaaaggccaagtatgaaaatgaaactagttaacatctggaataacaaattacaagctcaaaggagagtgtacaagtacactcaatggggattcaaaagaaggttctgtgtagctggggtgttagggcatctccaatccaaacacctaattttacatcaaatttggtgttaaccaaatttactgtaatcaactccaatctactgcatcgaaaaataatttattttctctctttattattatattattattttttatttcattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="92989" stop="123311"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="120891" g_stop="121278" g_length="388"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="388" r_length="388" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="121279" i_stop="121367" i_length="89">
            <donor d_prob="0.929" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="121368" g_stop="121484" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="389" r_stop="505" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="121485" i_stop="121587" i_length="103">
            <donor d_prob="0.292" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="121588" g_stop="121683" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="506" r_stop="601" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="121684" i_stop="122850" i_length="1167">
            <donor d_prob="0.712" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="122851" g_stop="123011" g_length="161"/>
          <reference_exon_boundary r_type="cDNA" r_start="602" r_stop="762" r_length="161" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-U580676" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>762</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U580676" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="120891" e_stop="121278"/>
          <exon e_start="121368" e_stop="121484"/>
          <exon e_start="121588" e_stop="121683"/>
          <exon e_start="122851" e_stop="123011"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTGATTTGTATGCTTGTTCTAAAGAGGATATGGGGCAGTATAGGGGCTCTTGATGCGTGGGTTGTTTATAGTTCAGGTCCTTCTGAATTCTATTATGAAGGAGATGATTTGTCACTTTTACATTCTCATGGTGTAGATAACCTTAATAATTATTTGACACCACGAGCTATGCTCTCCTCTAGGGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAGTTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACAAATATTGTGACTGTTCGTGATGTGCCACTTATGCCAGGTAATTTGTCATTGAGTGCTTGTTTGTATTAATAATCAATGATGACAGAAAATGTGGGCAACTAATTAATGTTCTTCTCTATCGTGCAGAAACTACAGCGACAAGGAGACTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCACCCCAAGTTGTGGTGACTGTGTATTGTCTGATGAAAGGTAGGTCATGTTATCAGCTTTGTTGGAAGGGTAAGGTATCTTTCTGATATTCTCTCCATCAAATAAGTTAGTAACTCACATAACCTGATGTCTCTTTTTTCAGGCCAAGTATGAAAATGAAACTAGTTAACATCTGGAATAACAAATTACAAGCTCAAAGGAGAGTGTACAAGTACACTCAATGGGGATTCAAAAGAAGGTAAACCATTCCCGCCATTTCCTGACCTGAACAAGAGCTGAATTTTTCTAGTGCATGTTTCAGTTAATTAGCTTCATTTCTTCTTTTTTTTGGGTAATAACTGTGAACTACTACCGTTACTCTAACATGAAAACTTCAAATTTACAACCTAAAGAGCACCTCTGGTCCCAACCACCTCTAAGAAGAGGTTTAGGACTATCCAGGTCTCAAACAAAACTGTTACAGGAAAAAAAAACATAAGGTATTGCCAAATACAAACAAATTTATTCAGTTGATCTAAACTATTTACTCTCTAGTTAATCTTCTCAGCAGATTCTGACACCATGCGGCTCCCCTTGTGTTCTGTAGAGTGGTATTCGAGCTCGCTTCTTTCTGTATTTGTACAATTGCACAACTTGTACTCACATCTATGCTTCGAAAAATCTTCCAATTCCTAGCTTTCCATGTGTGATAGATCATTGCCCCTAATACTGCCGCCAAAACTTCCTTTTGTATTTGCTTCCATTTCCTTCGTTTCAGCCATTTCAGACTTTGGGGCATCCTTCTGAATCATTTGGACCTCTGTCCAGTTTGCCAGACCATGTCAAACTGCAGTAATCCATTGACATTCGGAGAATATGTGTTGAGGAGTTTCTATCATGCCTGCCAAACAGAGACAACACTTTAGAGATACATTTATATGGGACATTGCAACATGAAATGGGTCTAAACTGACTAGCCGATTGTGACGCTCTGGTACTTTGGGAATTAAAGAGATCATTGTAGCATTATTTGCTTCAAAAGTTTTCCATTCCTAAAGAATTGCAAAACTGCCTCTGTAACATCATTGCCCACCACTTTCCAAGCCTTTTTGTAGTAATCACTTCCATATCCATCTAGACCGGGGCTCTTATTACTGCCAATGGTAAAAATGACTTTCTTGACATCATTTTTAGTATATTTCTTTATCAACTCAACCTGCTGAATGAATGTTAATGTATGACCATGTCTTTAGTAAATTTCTAAAGGTTTGCTCTTTGAATTATAAGGCTGAATAGGTTTCCAATTAAATTGGAAACCTATTCACGACATCATCATGTTTTAGGAAATACTTCACTATCTAGTATTTTCTTGCACGTGTTTCGTAAGAAAATGATTGGTTCTTTTTTTTTTTTTTTGGTAATGCAGGTTCTGTGTAGCTGGGGTGTTAGGGCATCTCCAATCCAAACACCTAATTTTACATCAAATTTGGTGTTAACCAAATTTACTGTAATCAACTCCAATCTACTGCATCGAAAAATAATTTATTTTCTCTCTTTATTATTATATTATTATTTTTTATTTCATTT</genome_strand>
        <mrna_strand>TCTTGATTTGTATGCTTGTCTAAAAGAGGATATGGGGCAGTATAGGGGCTCTTGATGCGTGGGTTGTTTATAGTTCAGGTCCTTCTGAATTCTATTATGAAGGAGATGATTTGTCACTTTTACATTCTCATGGTGTAGATAACCTTAATAATTATTTGACACCACGAGCTATGCTCTCCTCTAGGGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAGTTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACAAATATTGTGACTGTTCGTGATGTGCCACTTATGCCAG.........................................................................................AAACTACAGCGACAAGGAGACTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCACCCCAAGTTGTGGTGACTGTGTATTGTCTGATGAAAG.......................................................................................................GCCAAGTATGAAAATGAAACTAGTTAACATCTGGAATAACAAATTACAAGCTCAAAGGAGAGTGTACAAGTACACTCAATGGGGATTCAAAAGAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTGTGTAGCTGGGGTGTTAGGGCATCTCCAATCCAAACACCTAATTTTACATCAAATTTGGTGTTAACCAAATTTACTGTAATCAACTCCAATCTACTGCATCGAAAAATAATTTATTTTCTCTCTTTATTATTATATTATTATTTTTTATTTCATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U578040" ref_strand="+" ref_description="SGN-U578040 Tomato 200607#2 [2 ESTs aligned] ">
      <seq>ctctcctctagggtggatggaactcgggtaaatggattgatacgggaaatcaaggtaaaacagatgagcttataggatgaagaggatcagaagaagtcattcagctcatccattttaccaaagcatggagaagttttttgccacaaatgagtcttcaagaaaagcagcagtaaataacaaatattgggattgttcgtgatgtgccacttatgccagaaactacagcgataaggagactgcagcattctgcagaagctatctgctcggagcttccacatcaatgtaatcaatcttcaccccaagttgtggtgactgtgtattgtccgatgaaaggccaagtatgaaaatgaaactagctatcatctggaataacaaattgcaagctcaaaggggagtgtacaagtacacacaatggggattcaaaagaagaatatgcacaagcaaaaactcaaagttacttagttctgggacaaaatttgagaattagcaccaaaaatgattttgagatattcttttttgttcctttgtctttattttcattttgtgttgggataataacccggatatggatagagtggaaaagattcaaaagaatgaggattaatatagcaggcctactaattttgggtgagtagcataattgatggaagtgattgctgctgatgttgccattataggtatttaaagtttttatttcgttggtgcaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="93162" stop="131393"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="121064" g_stop="121278" g_length="215"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="216" r_length="216" r_score="0.981"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="121279" i_stop="121367" i_length="89">
            <donor d_prob="0.929" d_score="0.96"/>
            <acceptor a_prob="0.953" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="121368" g_stop="121484" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="217" r_stop="333" r_length="117" r_score="0.974"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="121485" i_stop="121587" i_length="103">
            <donor d_prob="0.292" d_score="0.98"/>
            <acceptor a_prob="0.972" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="121588" g_stop="121683" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="334" r_stop="429" r_length="96" r_score="0.948"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="121684" i_stop="130874" i_length="9191">
            <donor d_prob="0.712" d_score="0.96"/>
            <acceptor a_prob="0.445" a_score="0.82"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="130875" g_stop="131100" g_length="226"/>
          <reference_exon_boundary r_type="cDNA" r_start="430" r_stop="656" r_length="227" r_score="0.850"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="706" polyA_stop="722"/>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-U578040" ref_strand="+">
        <total_alignment_score>0.930</total_alignment_score>
        <cumulative_length_of_scored_exons>654</cumulative_length_of_scored_exons>
        <coverage percentage="0.906" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U578040" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="121064" e_stop="121278"/>
          <exon e_start="121368" e_stop="121484"/>
          <exon e_start="121588" e_stop="121683"/>
          <exon e_start="130875" e_stop="131100"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTCCTCTAGGGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAG-TTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACAAATATTGTGACTGTTCGTGATGTGCCACTTATGCCAGGTAATTTGTCATTGAGTGCTTGTTTGTATTAATAATCAATGATGACAGAAAATGTGGGCAACTAATTAATGTTCTTCTCTATCGTGCAGAAACTACAGCGACAAGGAGACTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCACCCCAAGTTGTGGTGACTGTGTATTGTCTGATGAAAGGTAGGTCATGTTATCAGCTTTGTTGGAAGGGTAAGGTATCTTTCTGATATTCTCTCCATCAAATAAGTTAGTAACTCACATAACCTGATGTCTCTTTTTTCAGGCCAAGTATGAAAATGAAACTAGTTAACATCTGGAATAACAAATTACAAGCTCAAAGGAGAGTGTACAAGTACACTCAATGGGGATTCAAAAGAAGGTAAACCATTCCCGCCATTTCCTGACCTGAACAAGAGCTGAATTTTTCTAGTGCATGTTTCAGTTAATTAGCTTCATTTCTTCTTTTTTTTGGGTAATAACTGTGAACTACTACCGTTACTCTAACATGAAAACTTCAAATTTACAACCTAAAGAGCACCTCTGGTCCCAACCACCTCTAAGAAGAGGTTTAGGACTATCCAGGTCTCAAACAAAACTGTTACAGGAAAAAAAAACATAAGGTATTGCCAAATACAAACAAATTTATTCAGTTGATCTAAACTATTTACTCTCTAGTTAATCTTCTCAGCAGATTCTGACACCATGCGGCTCCCCTTGTGTTCTGTAGAGTGGTATTCGAGCTCGCTTCTTTCTGTATTTGTACAATTGCACAACTTGTACTCACATCTATGCTTCGAAAAATCTTCCAATTCCTAGCTTTCCATGTGTGATAGATCATTGCCCCTAATACTGCCGCCAAAACTTCCTTTTGTATTTGCTTCCATTTCCTTCGTTTCAGCCATTTCAGACTTTGGGGCATCCTTCTGAATCATTTGGACCTCTGTCCAGTTTGCCAGACCATGTCAAACTGCAGTAATCCATTGACATTCGGAGAATATGTGTTGAGGAGTTTCTATCATGCCTGCCAAACAGAGACAACACTTTAGAGATACATTTATATGGGACATTGCAACATGAAATGGGTCTAAACTGACTAGCCGATTGTGACGCTCTGGTACTTTGGGAATTAAAGAGATCATTGTAGCATTATTTGCTTCAAAAGTTTTCCATTCCTAAAGAATTGCAAAACTGCCTCTGTAACATCATTGCCCACCACTTTCCAAGCCTTTTTGTAGTAATCACTTCCATATCCATCTAGACCGGGGCTCTTATTACTGCCAATGGTAAAAATGACTTTCTTGACATCATTTTTAGTATATTTCTTTATCAACTCAACCTGCTGAATGAATGTTAATGTATGACCATGTCTTTAGTAAATTTCTAAAGGTTTGCTCTTTGAATTATAAGGCTGAATAGGTTTCCAATTAAATTGGAAACCTATTCACGACATCATCATGTTTTAGGAAATACTTCACTATCTAGTATTTTCTTGCACGTGTTTCGTAAGAAAATGATTGGTTCTTTTTTTTTTTTTTTGGTAATGCAGGTTCTGTGTAGCTGGGGTGTTAGGGCATCTCCAATCCAAACACCTAATTTTACATCAAATTTGGTGTTAACCAAATTTACTGTAATCAACTCCAATCTACTGCATCGAAAAATAATTTATTTTCTCTCTTTATTATTATATTATTATTTTTTATTTCATTTATATTTTTTTATTTCATAAAACAAATTCTTTCTATGGTTCTCCTTTTATAATCGTTTAATATAAAATTATTTTGTATCATAATTTTTTAAATATATAAATTGCTAGCAAATATTATACAGTATACATAATAATGGATTATACAAATAAAAGTAAAATCATTAATGAAATACAATTAGATAAACGTTATATAATTGAAGATTTTATTTTAAATTATACATAAATATTAACTACGATGCTCCCATAAATGTTCTATTAATGCATTACGTAGTTTAAAATGAGCTTCTTGTCCTTCATTTTTTTTATATCGAGCTAAAAATTATTGAAATTGATAATTTTCGTCTATTGTCATTTCTACAGTCGGTGCTGGACCTTTCGATACATCTTGAATTGATGCATTAAGATCACGCACATTCTCAATTGTATTATTTTTAAAAAAATTTGTATGTTTGTATTTTTAATTTTATGAGGGTAAATTGTAGTTTATATAACTAATATATAGTATATTAACACAAATTTAATTTTTTAAAAAAGTCATATAAAGAAAAATTAATTTATAAAAAGCTAAATTTTATATCTAAATTAATATTATAAAAATATTCCATTGAAAATGATTAAATATACAAAAAAATATAATTAAAACATACAATTTATATAACGTTTAATTAAAAGTTTGTGTAGTGAAATAATATTATAATATTTAAAAAGTTATTTGGTGTGAAAATTAGTGCAGGTTAGAGCTTAAAACACCAAATTTCACACTAAATAAAATAATTAGTGTAGAATTTGGTGTTGGGTTGGAGATGGTCTTAGTCTAGCTAATGTGGAACTATCAAAATTTCTACAACAGTGTAGTCCATTGACACTTACAAGTACTCATATTTCACCTCATTGAATTAACTCTAATATTTCTCGTGTGAAATCTTGCTTATGTTCTTACTTAATTGTCATGTCATGTTCTCTGACTAAACTCCCCTTCTTTTTTTTTTTTGGTTACTTTATTGTTTTAATTAACTTCGATTTATTGCCCATATGTAGCTATTTTAGTAGTTTATTGTAGAGATTCTTTATATGTGTGCTTTATGGAGTTTACATTGCAATTATATCTCGTAATGTTAGCATACAACTTTCAAATTTCTATAATTTATTTTTCACTTTTTAATACTTATGGATGCTATTATGTTTGGTGTTAATTCAATATTATTACACAAAAATCTTATTTGTATAGATATTCTTGTGACTTGGACATTTTCTTTTATAGTGCAATCTCGTTGATAATTAAATGAGATGTTAATTGATAATTAGTAATTGTATGGAGCAACTAAAGTTATGGAAGTTTTGGTCTATTATTTATTTGAATTTAAGACTAATCTTTTCATTCTTATGTCTTTTCTCATCCTCCTTCAATGTTATTATGCAAAATTTCTAATGATTTTAGAATCTCGTACTTTGTGAATTATATTTTGTTTATTTATATATTAAGATATTTTTTTGTGCCGTTATATCTACTTTTCGGTGTATTTGAGATAATTAAGAATTTATTTTAACATTTAAAATAATTGTATTGTTACTTTGCTAAGTACGAGTCATGTTGACTTTGTGGCAGTTAAATGAAAATAACATGGATATTTTCTAGTTTAAGTGAAACAAAGTAATATGAATATGTTAAAAGTTTAAAATAAGATTTTATGGTCATAAGAGATGGATGTATTTAATTTTTGCTGTTTAGGATTAAAATTTTGAATTATAAATTTTGTAATCTAAATAGATATGTGAATATTGCATCTTTCTTCTTGCGATAGAAGTTAAACTCAGCTCTGACAGCTAATTATGTTCTTCCCATCCATAGTGACTGCAAGTTTACTTTTTATTGTATTTGAAAAATGAAGTATTCGCAAACTTTTTTTTTATTGTATTTTAAGGAGGAATAAGACCAAAAAAATGAGAATTAATGACGAGAAGAATATAGTTAGGGTCAATTTGGAAAGTCACTTGGTAATTGAAATTGGTGTAATTAATTACACTTACCTGTTTGGTTGCCACATTGTAATTACACTAAAATTACACATGTCGTGTTTGAATGTCAAAATGTAATAACACATGTTCTGTTTGTATGCATAAACGCAATCACAAAATTATGATAAATTTTAAAAATAAGAATTAATTATTTAAAATTTATACTAGACAAATAAGAAACTTTATAAATGACATTAAATTAAATAGTTAAGATATATATTCTTTTTTGAAAATATATTAATGAATAAACATATTTTCCGTAACTAATATTATGAAAAAATAATTGATTTATATTTTTAAAATTAATATCTTTCAATTGAATTGATCGTAACAACTAAAAATATGAAGTTTTCACGAACATCGTGAAATGCATGTTTGATAATAAGAATAATATATAAATAAAATGTCATAAATTATTAAATGTTTGACAAAAATGTTATCTATCAAGTCTAATTAAAAAAAATATTGTGCAATGTAAATTCAATATCTACTAAACAAATGAAACTGAAAATATGGCATAGCAAAATTTTGAACATAATACTCTTATAACAAATTTCAACATAGCAATAAATATGATTTATTCTTATTTTTCTTAGTTAAGAAAACGTAAGTCTATAAATTCTATTTTAATTAAAAATTAAAATACTAATAAAATCATGCTAATGAGAATATAAACATGGCAGATAGAAATAGATAATACGAAAAAAATTACATAAATACACGTAAAGTAAAGTTGAAAATAAGAAGAAAATAAAATATATAATAATGTAAAATAATAAATAAACTTTTACAAATTTTTAGAATAATAATAATAAAAAAAATTAAAATAATAGAAGCAAAGAAAATTAAAATAAAAATTGAAATAAAAAAATTAAAAAGTAATCAAGTGGTAATTACACCATGCAATATTAGAAATTCACCGCCTCTGCGGTTGAATTATAGAGTATAATCACCTCTGTCACTGACCAAGTAATTAAATATCCTTTCAAACAGGACAAAACAATTTAATTATATCAAATCTAATTACCAATATATCCTTCCAAACAGGTCCTAAGTTTTTGTTAAAATAGGCTTACTATCACTGAACAACTTGAAAATTAACTAATTTAAGTTAGTATATGATAACAATTTTCATATTATAAATGGAATAGTTATTTTTTAATTATTATTGTTATAATCAATGAAACAGAATTTTTTAATTAAAAAATTTGAAAAATAAATAAACAAGTACTAAAATAAAATAAAATAGAATAAATATATTATTATTAACGCGTTTATTTTTCTCCGCGTGTTCAAATGCTATAAATAAGAGCTCACTGCCCACTACAGAACTTCATACGCTATACTCACCACCGTCGCAGAACCGGAAGCTACCGGAGTATAGAACTCGCCACCGTCGCAGAAGCGGAAGCTAGCGGAGTATAGAACTCACCACCGTCGCAGGACCGGAACTTCATACGCAACCGGATGAAACCCCTAAAACCGAATCAATTTTCCCGCCGTCAGCTTCCCATCATGTTCGAATTCTTGAAAAATCTGGTAACTCGATGGTACTGTAAGATTTTCTTATCCATGTTTAAAATAATCAAAGAAATCATTCTTTATTTTAAGAAATTCAATAAATCTTTTCTTTCTTAAAAAATCAAGAATTTGTTTTCACTTCTTTAAGGAGAGAGGGGATGAATGCCCGAGACTATTTCTGTCAATGGGGTTTTCTTGGATTATTGCACAAGTGTTGTTGACTAGTTCTTATAAAACAGACTTGAATTTCTGTCAGGGGTTCCTGAATAATTTAACCTGGGTTATTGATGAGTTGCTTTAAAACAGACTCAAATTTCTGTATGGGTTTTCTTGAATGATTTTAAAAAAGATGTACTAATTTACCCCTTCAAAGGTATTGAATGGAAAGTTGTGGAGTTGTTCTTGAAGCCCCATTCGCACAATTCTAGTTTAATTATAAGAAGTTAAGTATTTTTGAATGAAGACACTCAATTAGGCAAACTTCCGTAAATGTCCTCAGTGACCAATTTCCTTTACATGGTCTATAGTATAGACCTTTTGACTTCGATTGTTTCTTCAAAATGGAAAATTGTGCCAGGTAAGAGAATGGTGAATTATATGGTTCGTGTTTTCTGATTTTGTTAATGTTTTGAGGATCTGTAGAGGTGGGCTGCTGCTAAGAACATCATAGTTATGTGAGTAACGATGAAAGTTGTGCTTTCATGCAGTTTTAATCTTTTACACTATAGTTGCACCTGCAAATTTGTGTGTTGCTTGCAAAATAGGCAGTGACCAGAGAGGAGGCTCTTCATTGAATTCTTATGTTACTTCCTTTGCTACTTTGCACGATGAGAGCATATGTTTTATATGAAAATTGATATTCTCAGATGCTCCTTTTCGGTGTATCATAATTTTCTTTATACACAACCCTTAGTTCTTTTTTCAATGAGATTTACTTCCTTAGAGGACTGTCCTTTCTATTTTCTTATGCTTATAACTTGTGTACTCTTAGTTTGAACTTTAACCCAGTGTCAACTTTCCACCCGGTGTACCTGCTATATATAGATGGATGACAATGGTAAGTTTAGTTTCTTTGACATCGATTTAATGCATTTTGATGTGCAGAAAGTTCTACTCAATTTGTATTTTACTTTATCACTTCTTTTGAACGATCTGGTGTCTCATGCTGATGGGAGAAAGATATGGTAACATTTTTGGAAAATGTTAGACTCACATCATCTCTTTTTTTTAATGATGCTGCTGTACATAATTTATTTTGCGTGACAACTATGATGTTCATAACTTGGAATGGTTGTTTAGTCTATAGGATTACATGCATTACCAACTGATAGGCCGGTTGATGGTTTGTGTACATTAATATCTTTTTACAGATGTTCTTTATTTATTGTTTTGTGGTTTTACTTGTAATTGGGAGAACTGGAATGGCTGTACACAACACAAAATATTGATGCTTACATTTTGTTTCTGCTTTTATTTTAAGATCTTCATGTCCATCACTTTCCTGGTGCTCAATTTGACCTATTAAATATGCTAAAACTGTTGATGTTTGGTAGTATTGTAGGGACTCAAGAAATTTCGAGGATACTATTTTATGCATCCTTCGTTTCAAAAGTATCAACTTACCTCCTTCAGTTAAGAGTTACTGAGTTGATATCTTTTCTCTTCTTTGAAGTAATAAAAGAGAGAGATATATTAATGACATGGATCCTAGAGGAACTTGCTTCATTTGAACACTTCTTTTTGAGAATTAAAAATACTGCTTCATTTGAATACTTTAAAGCTTCTTTAACGTTATAACAGACAACAGTTCTAATAAATACAAGAAATTATTAATTAGAATGGGACGATTAAGGAAAAGCGAGAATAGGCTTTGACGAAGTGACAAAATTTTCATATTTTTCTTTAATGAGTTGAGGAAGTGGGAGCACATGTAAACATAAGATGACGTTTAGTTCTTCTTAGTTTTCGACTGCAGACCATGACTAGATCAAACTTTAGAGCTGTTGCACTTTTTAGGATTACTGGATTTTGTTTCACTGATTACTTTGTCTGATAATGTAGACTCTTTGCTATGAACTGGATTAGGATGATAATGACTTCAATGCCATGTTATTTAATTGTTAGAAGTGCTGGTCATCACCAGCTCATAATTTCTACTTTGTGTACCATATGTAGGTTAAGAGAGGAGTGATTTGAGTTATTATCTGAAAGAAGCAAAATAAAAAGAGGTGTGTGTGTGTGTGTGGGGGGGGGGGGGTTCTTGTTTGTCTATTAGAACATGTCACTTGTTCATTTTTGTTCCATGTTAGATGTGCAATCCAATTGCCAGAATATGTGCAACATTTATATCCCTAGTTGGCACCATTGATACTGCTTCTGTTAATCTGATAAAGCTATTTTGATGTGCTTTATCGGTGAGAGCAATTCACTCGACATTTTTATTCAACTCTTAGGATTCATTGTATATGACGTTATTTGTACATGTGGCTTTGTTGAAGTATCCTTCTCATCTATTGCTATCCCATTCCCTGCACCATTTTTCAGATATATTATACCTGTGAATTATGATATCAGGAAAAAGAGGTGCAGGATCCAGAGTTACAAAGCGACACTTGAACTTCTTTCCTGCAGCCAAGAAATTGATTGGAGAATGCACTGTCAGGAGTGCAATTCGATCTTCACAGATTATTCTGTGGGGAAGTGCTTCTGCAAAGCATGATCCTGAGTCCAGATTCCTCTGTCAGATCAAAAATTCAAGTCAGTCAATACTCAAATGATTGCTCTCTTGCTCCATTGCACAATCGGTGTGAATTGGAAATCCAGAAACTCTGCACACCCCTTTCATCTAATGTTTTACCTACGGAGGATGGTTTCCTGGATAACGAATTCAGTGTTTCAGCTAGCTCCAGTTACAAATCAGACTGCCTATTAGTTCTATGACTTCCTTTTCTCTTGAGCTACTTTTGGAAAGCCTAGATAAGAATATAGTTGTTGAAGTATCCTCCTCATCTGTTGCTATCCCATTCCCTGCTCCACTTTTCAGATATACCTGTGAATTATGAGATCAGGAAAAAGAGGTGCAGGACCCAGAGTTGCAAAGTGACACTTGAACTTCGTTCCTGCAGCCAAAGAAATTGACCGGAGAGTGCACTGTCAGGAGTTAGATTCGATCTTCACGGATTATTCTGTGGGGAAGTACTTCTGAAAAGCAAGATCCTGAGTCCAGATTCCTCTGTCAGATCAAAAGTACTTCACGGATTGTTTCCACATGCTGCAAAAAGAGATCTCGATTTTATGCTTGTTCTAAAGAGGATATGAGTATTATAGGGGAAGTTGATGCTTGGGATGTTTATAGTTCAGGTCCTTCTGCATTCTATTATGATGGAGATGATTTGTCACATATACATTCTCATGGTGAAGAAAACCTTAAAAATTATTTGACACTCGAGCTATGCTCTTCTCTAGGGTGGATGGGAACTCGGGTAAATGGATTGATGCTGGAAATCGAGGTAAAACAGATGAGCTTATAAGGAAGAAGATCGGAATAAGTCATTCAGGTCATTCATTTTACAAAAGCATGAAGTTCTTTGCCACAAATGAGTCTTCAAGAATGGCAGCAGTAAATAACAAATATTATGACTGTTCATGATGCGCCGCTCACGCCAGGTAATTTGTCCTCGAGTGCTTGTTTGTATTAATAATCAATGATGCAGAAAATGTGCCCAACTAATTAATGTTCTTTTCCATCGTGCTGAAACTACATAGGTAAGGAGACTGCAGCAGTCTGCAGAGGCTATCTGCTCGGAGCTTCCACATCAATATAATCAATCTTCCACCCCAAGTCGTGGTGATGGTGTATTCTATGATGAAAGTTAGGTCGTGTTATCAACTTTCTTGGAAGGGTTAGGTTTCTTTCTGATAAGGAATCAATTATGTTAGTTACTCACACGGCCTGATGTTTCTCTCAGCAGGCCAAGTGTGAAAATGAAACTAGTTAACATCTGGAACAACAAATTACAATCTCAAGGAGAGTGTACAAGTACACACGATGAGGAGTCAATAGAAGGTAAACCATTCGGCCATTCCTGCCATTTGTTCCTGTCCTGAATAAGAGCTGAAATTTTTCTAGTGCATGTTTCAGTTAATTAGCTTCATTTCTTTCACCCAATTTTTCAAGATTATCTTAAACTACATTCTTATTAATCATGAAAGCATTATAGATTACCATGTCTCGTTACATGCTTCCTGGGCCGCATAAACTCTTTCAAATCCCATCTGATCTTGTAATAGAATTGTCATGCCCCGACATTTTTTACTTACAATTTCAGAATTCGCACCAACAAAAACTCAAAAAGTTTCTTATTTCTCGGACAAAATTTCAGAAGTTGCACCAAAAATGATTTTGAGATATTTTTCTTAATTCCTTTGTCTTTGTTTTCA-TTTGTGTTGGAACAATGACCCTGATATGGATAGAGTGGAAAAGATTCAAAGGAATGAGGATAAATATAACACGGCTACTAATTTTGGG-GAGCAGCATAATTGATGG-ATTGATTG</genome_strand>
        <mrna_strand>CTCTCCTCTAGGGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAGTTTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACAAATATTGGGATTGTTCGTGATGTGCCACTTATGCCAG.........................................................................................AAACTACAGCGATAAGGAGACTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCAATGTAATCAATCTTCACCCCAAGTTGTGGTGACTGTGTATTGTCCGATGAAAG.......................................................................................................GCCAAGTATGAAAATGAAACTAGCTATCATCTGGAATAACAAATTGCAAGCTCAAAGGGGAGTGTACAAGTACACACAATGGGGATTCAAAAGAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATATGCACAAGCAAAAACTC--AAAGTTACTTAGTTCTGGGACAAAATTTGAGAATTAGCACCAAAAATGATTTTGAGATATTCTTTTTTGTTCCTTTGTCTTTATTTTCATTTTGTGTTGGGATAATAACCCGGATATGGATAGAGTGGAAAAGATTCAAAAGAATGAGGATTAATATAGCAGGCCTACTAATTTTGGGTGAGTAGCATAATTGATGGAAGTGATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U590718" ref_strand="+" ref_description="SGN-U590718 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>gggataacgaattcagtgtttcagctagctccagttacaaatcagactgcctattagttctatgacttccttttctcttgagctacttttggaaagcctagataagaatatagttgttgaagtatcctcctcatctgttgctatcccattccctgctccacttttcagatatacctgtgaattatgagatcaggaaaaagaggtgcaggacccagagttgcaaagtgacacttgaacttcgttcctgcagccaaagaaattgaccggagagtgcactgtcaggagttagattcgatcttcacggattattctgtggggaagtacttctgaaaagcaagatcctgagtccagattcctctgtcagatcaaaagtacttcacggattgtttccacatgctgcaaaaagagatctcgattttatgcttgttctaaagaggatatgagtattataggggaagttgatgcttgggatgtttatagttcaggtccttctgcattctattatgatggagatgatttgtcacatatacattctcatggtgaagaaaaccttaaaaattatttgacactcgagctatgctcttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="129123" stop="130306"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="129422" g_stop="130006" g_length="585"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="585" r_length="585" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-U590718" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>585</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U590718" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="129422" e_stop="130006"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGATAACGAATTCAGTGTTTCAGCTAGCTCCAGTTACAAATCAGACTGCCTATTAGTTCTATGACTTCCTTTTCTCTTGAGCTACTTTTGGAAAGCCTAGATAAGAATATAGTTGTTGAAGTATCCTCCTCATCTGTTGCTATCCCATTCCCTGCTCCACTTTTCAGATATACCTGTGAATTATGAGATCAGGAAAAAGAGGTGCAGGACCCAGAGTTGCAAAGTGACACTTGAACTTCGTTCCTGCAGCCAAAGAAATTGACCGGAGAGTGCACTGTCAGGAGTTAGATTCGATCTTCACGGATTATTCTGTGGGGAAGTACTTCTGAAAAGCAAGATCCTGAGTCCAGATTCCTCTGTCAGATCAAAAGTACTTCACGGATTGTTTCCACATGCTGCAAAAAGAGATCTCGATTTTATGCTTGTTCTAAAGAGGATATGAGTATTATAGGGGAAGTTGATGCTTGGGATGTTTATAGTTCAGGTCCTTCTGCATTCTATTATGATGGAGATGATTTGTCACATATACATTCTCATGGTGAAGAAAACCTTAAAAATTATTTGACACTCGAGCTATGCTCTTC</genome_strand>
        <mrna_strand>GGGATAACGAATTCAGTGTTTCAGCTAGCTCCAGTTACAAATCAGACTGCCTATTAGTTCTATGACTTCCTTTTCTCTTGAGCTACTTTTGGAAAGCCTAGATAAGAATATAGTTGTTGAAGTATCCTCCTCATCTGTTGCTATCCCATTCCCTGCTCCACTTTTCAGATATACCTGTGAATTATGAGATCAGGAAAAAGAGGTGCAGGACCCAGAGTTGCAAAGTGACACTTGAACTTCGTTCCTGCAGCCAAAGAAATTGACCGGAGAGTGCACTGTCAGGAGTTAGATTCGATCTTCACGGATTATTCTGTGGGGAAGTACTTCTGAAAAGCAAGATCCTGAGTCCAGATTCCTCTGTCAGATCAAAAGTACTTCACGGATTGTTTCCACATGCTGCAAAAAGAGATCTCGATTTTATGCTTGTTCTAAAGAGGATATGAGTATTATAGGGGAAGTTGATGCTTGGGATGTTTATAGTTCAGGTCCTTCTGCATTCTATTATGATGGAGATGATTTGTCACATATACATTCTCATGGTGAAGAAAACCTTAAAAATTATTTGACACTCGAGCTATGCTCTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U577804" ref_strand="+" ref_description="SGN-U577804 Tomato 200607#2 [10 ESTs aligned] ">
      <seq>cagaggagaatctgatctggagcacaatgcatctaaacagattcaacaaataaatgcatgcattaattcaattgatgtggacctgtaagaatttcttcaacaggagaccaactactgtttctcttgtcaacttgggtgctctgcttgagcagattgctaagttaggttcattgagtaggggttcctccaaggcatggcatgaatagcatcgtcatgaaatcaacctaaagcgttttgcagaacgactaagatcatccgtatcctagtgtctaaaaactctcgtgtggttccgtgtattttgggagttagtccaacttatgtggacctgtaagaatttcttcgacataaccggaggggatgaaaccgaaggctcccaatgagattcgcattctctaacatccaatggaaggagcggaaaccacactggatcatgaatcaggtgctggaatactttctgatttactgccatctgtagctattttagtagcttagtatagcgattccatacattggttttttttacggagtttacattgcaataacatttcttttcataaatgtactactgttaattgcaaaaagatgtaatctcacttattcctgaatagagatctgtatcatgtatcaattatagtactcacatactctgttcctttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="+" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="131313" stop="138939"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="131610" g_stop="131668" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="59" r_length="59" r_score="0.949"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="131669" i_stop="132529" i_length="861">
            <donor d_prob="0.683" d_score="1.00"/>
            <acceptor a_prob="0.796" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="132530" g_stop="132573" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="60" r_stop="103" r_length="44" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="132574" i_stop="134884" i_length="2311">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="134885" g_stop="135064" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="104" r_stop="283" r_length="180" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="135065" i_stop="136218" i_length="1154">
            <donor d_prob="0.876" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="136219" g_stop="136281" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="284" r_stop="346" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="136282" i_stop="136472" i_length="191">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.892" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="136473" g_stop="136512" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="347" r_stop="386" r_length="40" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="136513" i_stop="138369" i_length="1857">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="138370" g_stop="138640" g_length="271"/>
          <reference_exon_boundary r_type="cDNA" r_start="387" r_stop="657" r_length="271" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="+" ref_id="SGN-U577804" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>657</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U577804" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="131610" e_stop="131668"/>
          <exon e_start="132530" e_stop="132573"/>
          <exon e_start="134885" e_stop="135064"/>
          <exon e_start="136219" e_stop="136281"/>
          <exon e_start="136473" e_stop="136512"/>
          <exon e_start="138370" e_stop="138640"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAGGAGAATCTGATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCATGTACTAATCTAACTCTAGCCTTTGGTGGCAGCAACTCTCTTTCTCTCTTCTTCACACATAAATGAAAAATTGGATGCTGCAATAGATTGACAGTTTTTATGCAAGTACTGCTACTCAGTGTATACAATATAGGGAAATGCTATGATAATGAAAACAGTAATTTGATTGGAACATCATGCATTTTGCTAGTTGTTAATACAGGATTTAGGAAGTCACTTTAACTAATAGGAAATAAGAATTGGGATTAGGAATTATTGGGAATAAAGCTACACTGAGTTATAAATACACAAGGGCTGAGAGAGATTGCCCACCTCTGTTCTCAAACCTTTTACGACACTTTATAGCTTATTCTCTTCAAATACTCCTCTTTTAGAAGGATATATTTCTGTATAAATGTGGAAAACAAAGCATGACAAACACTTCTTCTCTGGCTAGTTATTCCATTTTGCGGTATCAATACCAGAGTTTATATTAGTTCTGTGGTCCATGTTAAAAAGCAAGAAGGATCTTTTAGGATTTAAGCCTTTCAAATGTCATTTGTGCGCATTGTCTCTTTATGTCCATTTTGTGTTTTAATTGGATTAATTATAAAAAGTGAATTACAAATTGTGAGTTCTATCGGAAGAGCTTTTTTGTTGTAGTACCATCAGGTACAAGATGATGCTAGAGGTTCTCTCTCTTTGAGTTATAAGGCCTTGAAGCTTGAATAAATTCCAACTTAATTTGGAAAACTATTCATGACATCGTTCATGTTTTAGGAAATACTCCACTATCTAAAAACTAAAAAGATTCTCTTGCAAATGTTTCAAAAGAAAATGATATTTGTTTTTTTTATAATACATGTGGTTCCGTGTATTTTAGGCATTAATTCAATTGATGTGGACCTGTAAGAATTTCTTCAACAGGTTAGTCCATTGACACTCACAAGCTCTCATATTTCACTCCTTTATTTAATTAGTCTTTCTTGCTTAAACGTTGTGTCATGTTCTTTGAATTAACTCCAACATTACCTCCTTCCCCAATTAATGCCTTCCTTTAGTTTATTCTACACCTCTTTTTTTTTTTTGATGATCATACATCAACAAGAACCGAAGAAGCCGAAGGCTCCCAATGAGATTCGGTAAGATGCTGCTTTTATACCTTTTTGCCCTTCAAACTTCATCTTTAGACAAACTTTTGTTATTCATTACTTGTATTTGTTTTCCATTTCAATTTCCCCTTACATCATCAACTATTTCAAAGATGAAGACAAATGTGTAGTTGTTTGTACTTCACGCCACTCTATGAAATTATTTCTATGTGGAATCTGTTTGTCGCCAAGTTAAGGTAAACAACTTAGGTGACATTTATTTACAACTTTGAAGAGTTCGACTATTTGGTTATTCTGAAAAGGTGATTGGTACATTACTTTTCTATTTTCTAATTCTGATAACGTAATTGGAAGTTCCTACTAATGTTCAGACCAAAAATATTACTTAATTCATTCAAATTGAAGTAATACTTACAAAATGTATGTATAAAGATAAAACAGATGAACAAGGTTATTGTCGATGATATTGACAGTTGATATGTATGTTTCTTTTGTTTAAATTCAATTTTTTTTAGAAATTTTTAAGCTTGGATGCTATTAAAAGCTAACAGTTACTATGCTTTTCATTGGGAGCTAAAAGGATTTGGTAGTTTCTTTCTAGAAAAAGAAAAAAGAAACATCGATGGTCTTACCTTTCGTAGTTTTTTTAGATAAATATTAGTGTTTTTTAGTGATGAATGTTGAGGTTCAAGAAATAATGTTGTTCCTTCTATGTTTATTCCATATTTAAATCACTATATTGCATTCATAATCATTATATTCTTCTTTGTTGAAATGAATTTACCTTCCATCATGAATTCATGTATTATACTAATTGGCCAAATTTTTCATTAGTTTCACTTTTTTTTACAAAAAAAACCGCATCCACACATAAGCCACTCACAAATACAAACTATTCTTTGTTCTTGAAGAAAAAAAGAAATTCATAGATCATTTAACTACAAGATATAGAATGGCAACACATATTAGCATTTTATAATTGATCATAATATCATTTTATAATTGATCATAATATTTCAAAGCTACTATATATTTAGAATAACTTATATTGCCAAAATATTCAAAACAAAAGTACTATTTATCCTAATAAATATAAGCAATGACAACATAAACAATAACAAGGGAGTGAACCAAATACTAATTATCACGATTCAAGACAATCTTGAAAAAAGTAAAAAACATTTAATATAATGCCAAAAATGGAATTAACTTTCTTTTTTTGGTCAAAGAGGAAAAAATTAATCTTCCAGAGCCACTTGCCGCCGCAATAGCCATCTTCCTGGCTATATTCCCTTGTAAAGTGTCCTTCTTGTCCGCATTTGTAGCATCCCGCTCCTCCTCCACCGCCTCCTTGGCTACATTCCCTTGTGAAAGAAGGAAGGGGCTGCTACAAATGTGGGGAAGAAGGGCATTTTGGAAGGGATTGTAGGCAGAGAGATGGCTATGGGAGGGGCGGAGGTGGCTCTATATCATTTGATTATTCGCATTCTATTACATGTTTTTACTTTTTTCAAGATTGTCAAGAATCATGATAATTAATATTTGGATCACTCTCTTGTTATTTTTTATATTTATTAAAATAAATAGTACTTTTGTTATAAATATTTTTGCAATGTGACTTACTCTAAATGTATGCTGCATGCTTTGAAATATTATGATCAATTATGAAGTGTTAATGTGTGTTGTCATTCCATCTTTCTGTTCTAGATGCATCAAAAATGATTTTGAGATATTTTTCTTAATTCCTTTGTCTTTGTTTTCATTTGTGTTGGAACAATGACCCTGATATGGATAGAGTGGAAAAGATTCAAAGGAATGAGGATAAATATAACACAGCTACTAATTTTGGGGAGCAGCATAATTGATGGATTGATTGGTGATGTTACCATTCTATTTATTTATTGTTTATTTTCGTAGTTGCAATTATGCTTGGAGATGCGTTGTTACCTTCAGCATGTTTTTTCATTGTTGAGGAGTTGAGGCAGACTTCATTATGTTTAAAATGAGTGGAAAATTGCATTTCAGGAAATATCTTGTTTGGAACTTCATTTGTTGGTATGCTTAAGAGAGGAATTCCATATTATTAATGACTGCAGTATATTTTCCTTTGTTTGTGTGCTTAACAGGAGACCAACTACTGTTTCTCTTGTCAACTTGGGTGCTCTGCTTGAGCAGATTGCTAAGTTAGGTTCATTGAGTAGGGGTTCCTCCAAGGCATGGCATGAATAGCATCGTCATGAAATCAACCTAAAGCGTTTTGCAGAACGACTAAGATCATCCGTATCCTAGTGTCTAAAAACTCTCGTGTGAGTATACATAAATTTATTTCTTCTTTCTACCTACCAAACAATAATTTGGCACTGCAGATATCTATTTTGCGATCATCATATTGAAGGAGAATCTGATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCATGTACTAATCTAACTCTAGCCTTTGGTGGCAGCAACTCTCTTTCTCTCTTCCACACACATAAATGAAAAATTGTATGCTGGAATAGATTGACAGTTTTTATGCAAGTACTGCTACTCAGTGTATACAATATAGGGAAATGCTATGATAATGAAAACAGTAATTTGATTGGAACATCATTCATTTTGCTAGTTGTTAATACAGGATTTAGGAAGTCACTTTAACTAATAGGAAATAAGAATTGGGATTAGGAATTATTGGGAATAAAGCTACACTGAGTTATAAATACACAAGGGCTGAGAGAGATTGCCCACCTCTGTCGCGAAGCGTGGTAGGCCTGCGCCGGGGGAGCATACCATAGGGAGGAAAGGGAGCTCGGACGGTGGAAGAGCCAGGGGAGGCTGGGTCATTTGACGGAAATGGAAGGCTTTTCCCTATTAGAGAAGGCCCTATGGAGTAAGGGGAAGTGGATGAATTCTTGGAAAAAGAGGGAGCTGTTCTCAAACCTTTTACGACACTTTATAGCTTATTCTCTTCAAATATTCCTCTTTCTGAAGGATATATGTCTGTCTAAATGTGGAAAACAAAGCATGACAAACACTTCTTCTCTGGCTAGTTATTCCATTTTGAGGTATCAATATCAGAGTTTATATTAGTTATGTGGTCCATGTTAAAAAGCAAGAAGGATCTTTTAGGGTTTAAGCCTTTCCAGTGTCACTTGTGCGCATTGTCTCTTTATGTCCATTTTATGTTTTAATTGGGTTAATTATAAAAAGTGAATTACGAATTGTGACTTCTATCAGAAGAGCTTTTTTGTTGTAATACCATTAGTTACAAAACGATGCTAGAGGTTCTCTCTCTTTGAGTTATAAGGCCTTGAAGCTTGAATAAATTCCAACTTAATTTGGAAAACTATTCATGACATTATTCATGTTTTAGGAAATACTCCACTATCTAAAAAGATTCTCTTGCAAATGTTTCAAAAGAAAATGATATTTTTTTTTGATAATACAGGTGGTTCCGTGTATTTTGGGAGTTAGTCCAACTTATGTGGACCTGTAAGAATTTCTTCGACATGTAAGTCCATTGACACTCACAAGCTCTCATATTTCACTCCTTGGTTTAATTTGTCTTTCTTGCTTAAATGTTGTGTCATATTCTTTGAATTAACTCCCCCGGTTTAACATTATCTCCTTCCCTAATTAATGCCTTACTTTAGTTTATTCTACCCCTCTCATTTTTATTTTTTTTGATTATACATCAACAAGAACCGGAGGGGATGAAACCGAAGGCTCCCAATGAGATTCGGTAAGATGCTGCTTTTATACCTTTTTGCCCTTCAAACGTCATCTTTAGACAAACTTTTGTTATTCATTACTTGTATTTGTTTTCCATTTCAATTTCCCCTTACATCATCAACTATTTCAAAGATGAAGACACACGTGTAGTTGTTTGTACTTCACGCCACTCTATGAAATTATTTCTATGTGGAATCTGTTTGTCACCAAGTTAAGGTAAACTACTTAGGTGACATTTGTTTACAACTTTGAAAACAGACTTTTCTAACTTAGAGTTCGACTATTTGGTTATTCTGAAAAGGTGATTGGTAATTTTCTAATTCTGATAACGTAATTGGAAGTTCCTACTAATGTTCAGACCAAAAATATAACTTCATTCATTCAAATTAAAGTAATACTTACAAAATGTATGTATAAAGATAAAACAGATGAACAAGGTGATTTTCGATGATATTGACAGTTGATATATGTATGTTTCTTTTGTTTATAAAATTAGAAGTTTTTAAGCTTGGATGCTATTAAAAGCTAACAGTTACTATGCTTTTTATTTGGAGCTAAAAGGATTTGGTAGTTTCTTTCTAGAAAAAGAAAAAAGAAACAATCATGGTCTTACCTTTCTCAGTTTTTTAGATAAATATTAGTTTTTTTTAGTGATGAATGTTGAGGTTCAAGAAATAATGTTGTTCCTTCTATGTTTATTCCATATTTAAATCACTATATTGCATTCATAATCATTATATTCTTCTCTGTTGAAATGAATCTACCTTCCCTCATGAATTCATTTATTATACTAATTGGCCAAATTTTCCATTAGTTTCACTTTTTTACAAAAATACCGCATCCCCACATAAGCCACTCACAAATACAAACTATTCTTTGTTCTTGGATAAAAAAGAAATTCATAGATCATTTAACTACAAGATATGGAATGGCAACACACATTAACATTTTATAATTGATCATAATATTTCAAAGCTACTATAGATTTAGAGTAACTCATATTGCCAAGATATTCAAAACAAAAGTACTACTTATCCTAATAAATATAAGCAATGACAACATAAACAATAACAAGGGAGTGAACCAAATACTAATTATCACGATTCAAGACAATCTTGAAAAAAGTAAAAAACAATTAATATAATGCCAAAAATGGAATTAACTTTCTTTTTTTGGTCAAAGAGGAAAAAGTTAATCTTTCAGAGCCACCTGCCGCCGCAATAGCCATCTTCCTGGCTATATTCCCTTGTAAAGTGTCCCTCTTCGCCGCATTTGTAGCATCCCGCTATTCCTCCACCGCCTCCCTGGCTACATTCCCTTGCGAAAGAAGGAGGGGGCTGCTACAAATGTGGGGAAGAAGGGCATTTTGGAAGGGATTGTAGGCAGAGAGATGGCTATGGGAGGGGCGGAGGTGGCTCTGGAGATTAATATTTCTTCTTTGACCAAAAAAAGAAAATTAATTTGATTTTTCGCATTGTATTAAATGTTTTTACTTTTTTCAAGATTGTCAAGAATCATGACAATTAATATTTGGATCACTCTCTTGTTATTTCTCTTATTTATTAAAATAAATAGTACTTTTCTTATAAATATTTTTGCAATGTGACTTACTCTAAATGTATGTTGCATGCTTTGAAATGTTATAATCAATTATGAAGTGTTAATGTGTGTTGTCATTCCATCTTTATGTTCTAGATGCAAGGTATCTTGTAGTTAAATGATATATGAATTTCTTTTTTTTCTTCAACAAGAAAGAAGAGTATGTATTTGAGAGTGGTTTATGCGGGGATGTTTTTTTTTTTTTTTATAACTTAAAGTGAAATGGATGAAGTTGGTTGACATAGCATGCCCTCTATGGAATCCTCAGCATTCTCTAACATCCAATGGAAGGAGCGGAAACCACACTGGATCATGAATCAGGTGCTGGAATACTTTCTGATTTACTGCCATCTGTAGCTATTTTAGTAGCTTAGTATAGCGATTCCATACATTGGTTTTTTTTACGGAGTTTACATTGCAATAACATTTCTTTTCATAAATGTACTACTGTTAATTGCAAAAAGATGTAATCTCACTTATTCCTGAATAGAGATCTGTATCATGTATCAATTATAGTACTCACATACTCTGTTCCTCTA</genome_strand>
        <mrna_strand>CAGAGGAGAATCTGATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTAATTCAATTGATGTGGACCTGTAAGAATTTCTTCAACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGACCAACTACTGTTTCTCTTGTCAACTTGGGTGCTCTGCTTGAGCAGATTGCTAAGTTAGGTTCATTGAGTAGGGGTTCCTCCAAGGCATGGCATGAATAGCATCGTCATGAAATCAACCTAAAGCGTTTTGCAGAACGACTAAGATCATCCGTATCCTAGTGTCTAAAAACTCTCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTTCCGTGTATTTTGGGAGTTAGTCCAACTTATGTGGACCTGTAAGAATTTCTTCGACAT...............................................................................................................................................................................................AACCGGAGGGGATGAAACCGAAGGCTCCCAATGAGATTCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTCTCTAACATCCAATGGAAGGAGCGGAAACCACACTGGATCATGAATCAGGTGCTGGAATACTTTCTGATTTACTGCCATCTGTAGCTATTTTAGTAGCTTAGTATAGCGATTCCATACATTGGTTTTTTTTACGGAGTTTACATTGCAATAACATTTCTTTTCATAAATGTACTACTGTTAATTGCAAAAAGATGTAATCTCACTTATTCCTGAATAGAGATCTGTATCATGTATCAATTATAGTACTCACATACTCTGTTCCTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U596918" ref_strand="+" ref_description="SGN-U596918 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>atatagtgctcgctccctctttttccaagaattcatccaggggcccttactccatagggccttgtctaatagggaaaagccttccatttccgtcaaatgacccggcctcccctggctcttccaccgtccgggctccctttcctccctatgggatgctccccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E08-voZPV/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E08.1" temp_strand="-" temp_description="C02HBa0236E08.1  AC216704.1 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E08 sequenced_by:kribb upload_account_name:korea">
        <position start="136008" stop="135249"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="135698" g_stop="135549" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="13" r_stop="162" r_length="150" r_score="0.947"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E08.1" gen_strand="-" ref_id="SGN-U596918" ref_strand="+">
        <total_alignment_score>0.947</total_alignment_score>
        <cumulative_length_of_scored_exons>150</cumulative_length_of_scored_exons>
        <coverage percentage="0.926" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U596918" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="135698" e_stop="135549"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCCCTCTTTTTCCAAGAATTCATCCACTTCCCCTTACTCCATAGGGCCTTCTCTAATAGGGAAAAGCCTTCCATTTCCGTCAAATGACCCAGCCTCCCCTGGCTCTTCCACCGTCCGAGCTCCCTTTCCTCCCTATGGTATGCTCCCCC</genome_strand>
        <mrna_strand>CTCCCTCTTTTTCCAAGAATTCATCCAGGGGCCCTTACTCCATAGGGCCTTGTCTAATAGGGAAAAGCCTTCCATTTCCGTCAAATGACCCGGCCTCCCCTGGCTCTTCCACCGTCCGGGCTCCCTTTCCTCCCTATGGGATGCTCCCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>25</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="4522" PGL_stop="3532"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="4522" e_stop="4419"/>
            <exon e_start="4349" e_stop="4254"/>
            <exon e_start="4178" e_stop="4073"/>
            <exon e_start="3982" e_stop="3532"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="1.000" e_score="0.990"/>
          <exon-intron don_prob="0.869" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.995" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.990">
            <gDNA_exon_boundary e_start="4522" e_stop="4419" e_length="104"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="1.000">
            <gDNA_intron_boundary i_start="4418" i_stop="4350" i_length="69"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="4349" e_stop="4254" e_length="96"/>
          </exon>
          <intron i_serial="2" don_prob="0.869" acc_prob="0.997">
            <gDNA_intron_boundary i_start="4253" i_stop="4179" i_length="75"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="4178" e_stop="4073" e_length="106"/>
          </exon>
          <intron i_serial="3" don_prob="0.997" acc_prob="0.995">
            <gDNA_intron_boundary i_start="4072" i_stop="3983" i_length="90"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="3982" e_stop="3532" e_length="451"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4522" stop="4419"/>
              <exon start="4349" stop="4254"/>
              <exon start="4178" stop="4073"/>
              <exon start="3982" stop="3532"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U598503" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CCTTGCACGGAGAAGTATGCAGAAATTTACTACAACAGGCCTGATGTGCAGAAAGCTATGCACGCGAATACAACAAGAATTCCTTATAAATGGACAGCCTGCAG : TGAGACATTGAATCGAAACTGGAATGATACAGATGACTCGATTCTCCCAATCTACCAGGAACTAATTGCTGCTGGATTGAGAATTTGGGTTTTCAG : TGGTGATGTAGACTCAGTTGTACCCGTTACCGCGACAAGGTATTCCCTAGCACAGCTCAAGTTATCTACCACAACTCCATGGTATCCTTGGTATGTCAAAAAACAG : GTTGGGGGCTGGACAGAGGTATACAAAGGTCTAACATTTGCAACAGTGAGAGGGGCAGGTCATGAAGTGCCATTATTCAAGCCAAGGGCAGCTTATCAACTATTTAGATCATTTTTAAAAGGAGAGCCACTTCCAAAGTCATGATTGTTGTGACATTATAAATTATACTATTATTAGTATTATGTATGCTTCAAAAATGTCAATTGTTTCTACTCTTAGGCTAAGAATTAAAGAGTTGCCAAGTTGAAAGAAAAGAATTGTTTCAACTTTTAAAAGAGAATTGATGGAAAAAGGGAGATTACAATAGGACTTTGGGTTGGGGAAAAAAAAAGGTATCAATTTGTTGTAACAATATTAGGTAGGTGTGGTTTGAAGTCTACCTCACGTGTTTTAGGAAAATGAATTTTCTTTATATTTCGTATTTCAATAAAAAGGGATTAGAATTCTTATT</gDNA_template>
            <first_frame> P  C  T  E  K  Y  A  E  I  Y  Y  N  R  P  D  V  Q  K  A  M  H  A  N  T  T  R  I  P  Y  K  W  T  A  C  S :   E  T  L  N  R  N  W  N  D  T  D  D  S  I  L  P  I  Y  Q  E  L  I  A  A  G  L  R  I  W  V  F  S :   G  D  V  D  S  V  V  P  V  T  A  T  R  Y  S  L  A  Q  L  K  L  S  T  T  T  P  W  Y  P  W  Y  V  K  K  Q  :  V  G  G  W  T  E  V  Y  K  G  L  T  F  A  T  V  R  G  A  G  H  E  V  P  L  F  K  P  R  A  A  Y  Q  L  F  R  S  F  L  K  G  E  P  L  P  K  S  *  L  L  *  H  Y  K  L  Y  Y  Y  *  Y  Y  V  C  F  K  N  V  N  C  F  Y  S  *  A  K  N  *  R  V  A  K  L  K  E  K  N  C  F  N  F  *  K  R  I  D  G  K  R  E  I  T  I  G  L  W  V  G  E  K  K  R  Y  Q  F  V  V  T  I  L  G  R  C  G  L  K  S  T  S  R  V  L  G  K  *  I  F  F  I  F  R  I  S  I  K  R  D  *  N  S  Y  </first_frame>
            <second_frame>  L  A  R  R  S  M  Q  K  F  T  T  T  G  L  M  C  R  K  L  C  T  R  I  Q  Q  E  F  L  I  N  G  Q  P  A   : V  R  H  *  I  E  T  G  M  I  Q  M  T  R  F  S  Q  S  T  R  N  *  L  L  L  D  *  E  F  G  F  S   : V  V  M  *  T  Q  L  Y  P  L  P  R  Q  G  I  P  *  H  S  S  S  Y  L  P  Q  L  H  G  I  L  G  M  S  K  N  R :   L  G  A  G  Q  R  Y  T  K  V  *  H  L  Q  Q  *  E  G  Q  V  M  K  C  H  Y  S  S  Q  G  Q  L  I  N  Y  L  D  H  F  *  K  E  S  H  F  Q  S  H  D  C  C  D  I  I  N  Y  T  I  I  S  I  M  Y  A  S  K  M  S  I  V  S  T  L  R  L  R  I  K  E  L  P  S  *  K  K  R  I  V  S  T  F  K  R  E  L  M  E  K  G  R  L  Q  *  D  F  G  L  G  K  K  K  G  I  N  L  L  *  Q  Y  *  V  G  V  V  *  S  L  P  H  V  F  *  E  N  E  F  S  L  Y  F  V  F  Q  *  K  G  I  R  I  L  I </second_frame>
            <third_frame>   L  H  G  E  V  C  R  N  L  L  Q  Q  A  *  C  A  E  S  Y  A  R  E  Y  N  K  N  S  L  *  M  D  S  L  Q  :  *  D  I  E  S  K  L  E  *  Y  R  *  L  D  S  P  N  L  P  G  T  N  C  C  W  I  E  N  L  G  F  Q  :  W  *  C  R  L  S  C  T  R  Y  R  D  K  V  F  P  S  T  A  Q  V  I  Y  H  N  S  M  V  S  L  V  C  Q  K  T   : G  W  G  L  D  R  G  I  Q  R  S  N  I  C  N  S  E  R  G  R  S  *  S  A  I  I  Q  A  K  G  S  L  S  T  I  *  I  I  F  K  R  R  A  T  S  K  V  M  I  V  V  T  L  *  I  I  L  L  L  V  L  C  M  L  Q  K  C  Q  L  F  L  L  L  G  *  E  L  K  S  C  Q  V  E  R  K  E  L  F  Q  L  L  K  E  N  *  W  K  K  G  D  Y  N  R  T  L  G  W  G  K  K  K  V  S  I  C  C  N  N  I  R  *  V  W  F  E  V  Y  L  T  C  F  R  K  M  N  F  L  Y  I  S  Y  F  N  K  K  G  L  E  F  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E08.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="4522" stop="4419"/>
                    <exon start="4349" stop="4254"/>
                    <exon start="4178" stop="4073"/>
                    <exon start="3982" stop="3839"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>447</number_coding_nucleotides>
                  <number_encoded_amino_acids>149</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PCTEKYAEIYYNRPDVQKAMHANTTRIPYKWTACSETLNRNWNDTDDSILPIYQELIAAGLRIWVFSGDVDSVVPVTATRYSLAQLKLSTTTPWYPWYVKKQVGGWTEVYKGLTFATVRGAGHEVPLFKPRAAYQLFRSFLKGEPLPKS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="8916" PGL_stop="5041"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="8916" e_stop="8519"/>
            <exon e_start="6491" e_stop="6288"/>
            <exon e_start="5184" e_stop="5041"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.986" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.994" e_score="1.000"/>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="8916" e_stop="8519" e_length="398"/>
          </exon>
          <intron i_serial="1" don_prob="0.986" acc_prob="0.995">
            <gDNA_intron_boundary i_start="8518" i_stop="6492" i_length="2027"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="6491" e_stop="6288" e_length="204"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.994">
            <gDNA_intron_boundary i_start="6287" i_stop="5185" i_length="1103"/>
          </intron>
          <exon e_serial="3" e_score="0.993">
            <gDNA_exon_boundary e_start="5184" e_stop="5041" e_length="144"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8916" stop="8519"/>
              <exon start="6491" stop="6288"/>
              <exon start="5184" stop="5041"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U578088" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AATTTCTCTCTCCTATTTATTGGAGGCTCAGCGGCCATTAACATAACACTCCCGCCCTTGATGACCTATATCATCACCTCATTGCTATTCACACACAAATAGCAAATTTCTTTATTTCTTTCAGTTTCTCAACAACAATAATATGGCCAAACGAAGATTAGCTTTGCTTTTGATTTTAGCAACAATTGTATGTGTGAGTGCTGCAAAGTTAAACAAATATCAGGATGAAGAAGACGCTGATAGAATAATATCGCTGCCTGGACAACCCAAAGTTTCGTTCCATCAGTACTCAGGGTATGTCACTGTCAATCAGTTTGCTGGAAGAGCTCTATTTTACTGGCTTACTGAAGCTATTGATGAACCACTTACTAAGCCTTTGGTTATTTGGCTTAATGGAG : GTCCAGGATGCTCTTCAGTGGCCTATGGTGCATCTGAAGAAATAGGGCCATTCAGGATAAACAAGACGGCTTCGGGACTGTATTTGAATAAGTTTTCATGGAACAAATTGGCAAATTTACTATTCCTTGAAACTCCAGCAGGGGTTGGATTTTCCTACAGCAATAGGTCCTCTGATCTCCTTGACACCGGGGATATTCGCACTG : CTAAGGACTCACTTCAGTTCCTTATCCACTGGATGAATCGGTTCCCACGCTACAGAAATCGTGAAGTCTACATCACAGGGGAGAGCTATGCTGGTCATTATGTCCCTCAGCTAGCCAGAGAAATAGTTCATTACAATGCCAACT</gDNA_template>
            <first_frame> N  F  S  L  L  F  I  G  G  S  A  A  I  N  I  T  L  P  P  L  M  T  Y  I  I  T  S  L  L  F  T  H  K  *  Q  I  S  L  F  L  S  V  S  Q  Q  Q  *  Y  G  Q  T  K  I  S  F  A  F  D  F  S  N  N  C  M  C  E  C  C  K  V  K  Q  I  S  G  *  R  R  R  *  *  N  N  I  A  A  W  T  T  Q  S  F  V  P  S  V  L  R  V  C  H  C  Q  S  V  C  W  K  S  S  I  L  L  A  Y  *  S  Y  *  *  T  T  Y  *  A  F  G  Y  L  A  *  W  R :   S  R  M  L  F  S  G  L  W  C  I  *  R  N  R  A  I  Q  D  K  Q  D  G  F  G  T  V  F  E  *  V  F  M  E  Q  I  G  K  F  T  I  P  *  N  S  S  R  G  W  I  F  L  Q  Q  *  V  L  *  S  P  *  H  R  G  Y  S  H  C :   *  G  L  T  S  V  P  Y  P  L  D  E  S  V  P  T  L  Q  K  S  *  S  L  H  H  R  G  E  L  C  W  S  L  C  P  S  A  S  Q  R  N  S  S  L  Q  C  Q   </first_frame>
            <second_frame>  I  S  L  S  Y  L  L  E  A  Q  R  P  L  T  *  H  S  R  P  *  *  P  I  S  S  P  H  C  Y  S  H  T  N  S  K  F  L  Y  F  F  Q  F  L  N  N  N  N  M  A  K  R  R  L  A  L  L  L  I  L  A  T  I  V  C  V  S  A  A  K  L  N  K  Y  Q  D  E  E  D  A  D  R  I  I  S  L  P  G  Q  P  K  V  S  F  H  Q  Y  S  G  Y  V  T  V  N  Q  F  A  G  R  A  L  F  Y  W  L  T  E  A  I  D  E  P  L  T  K  P  L  V  I  W  L  N  G   : G  P  G  C  S  S  V  A  Y  G  A  S  E  E  I  G  P  F  R  I  N  K  T  A  S  G  L  Y  L  N  K  F  S  W  N  K  L  A  N  L  L  F  L  E  T  P  A  G  V  G  F  S  Y  S  N  R  S  S  D  L  L  D  T  G  D  I  R  T   : A  K  D  S  L  Q  F  L  I  H  W  M  N  R  F  P  R  Y  R  N  R  E  V  Y  I  T  G  E  S  Y  A  G  H  Y  V  P  Q  L  A  R  E  I  V  H  Y  N  A  N  </second_frame>
            <third_frame>   F  L  S  P  I  Y  W  R  L  S  G  H  *  H  N  T  P  A  L  D  D  L  Y  H  H  L  I  A  I  H  T  Q  I  A  N  F  F  I  S  F  S  F  S  T  T  I  I  W  P  N  E  D  *  L  C  F  *  F  *  Q  Q  L  Y  V  *  V  L  Q  S  *  T  N  I  R  M  K  K  T  L  I  E  *  Y  R  C  L  D  N  P  K  F  R  S  I  S  T  Q  G  M  S  L  S  I  S  L  L  E  E  L  Y  F  T  G  L  L  K  L  L  M  N  H  L  L  S  L  W  L  F  G  L  M  E  :  V  Q  D  A  L  Q  W  P  M  V  H  L  K  K  *  G  H  S  G  *  T  R  R  L  R  D  C  I  *  I  S  F  H  G  T  N  W  Q  I  Y  Y  S  L  K  L  Q  Q  G  L  D  F  P  T  A  I  G  P  L  I  S  L  T  P  G  I  F  A  L  :  L  R  T  H  F  S  S  L  S  T  G  *  I  G  S  H  A  T  E  I  V  K  S  T  S  Q  G  R  A  M  L  V  I  M  S  L  S  *  P  E  K  *  F  I  T  M  P  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E08.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="8852" stop="8519"/>
                    <exon start="6491" stop="6288"/>
                    <exon start="5184" stop="5042"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>681</number_coding_nucleotides>
                  <number_encoded_amino_acids>227</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PISSPHCYSHTNSKFLYFFQFLNNNNMAKRRLALLLILATIVCVSAAKLNKYQDEEDADRIISLPGQPKVSFHQYSGYVTVNQFAGRALFYWLTEAIDEPLTKPLVIWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKFSWNKLANLLFLETPAGVGFSYSNRSSDLLDTGDIRTAKDSLQFLIHWMNRFPRYRNREVYITGESYAGHYVPQLAREIVHYNAN</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="18073" PGL_stop="17653"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="18073" e_stop="17653"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.907"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.907">
            <gDNA_exon_boundary e_start="18073" e_stop="17653" e_length="421"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18073" stop="17653"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U591120" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTTATTGTAGATGACCAATTTTTTTCTTCAAATACGAAATTAAATTACAATACACACAAAAAAATAGTTTAAATTTTTTTTCTTTAAACTAAGGAATGAAAAAGAAAAAACAGAATAAGAATAAGAAACTCAAATAATTATAATAAAAGAAGTCAAAAAATAATTTATGTATGAAAAAAATTAAAATATACCTTAAACTTTGATAGAAGAATCATATATACCCCTAAATAATTTTTTTTAAAAAATAGAAGTAATAAATATAAATTTTAAACTATTTTTTTAACTTCCGTAAAATGAAGGGTATATGTGAGCCATTTTGTAACGGCAGGGGTATATGTGAGTCGTTTGTATAACGGTAAGGGCATATATGAGCAACTTTTATAACGAGAGGTATATCAGCTCGAAATGACAAAGTTAAGGG</gDNA_template>
            <first_frame> L  I  V  D  D  Q  F  F  S  S  N  T  K  L  N  Y  N  T  H  K  K  I  V  *  I  F  F  L  *  T  K  E  *  K  R  K  N  R  I  R  I  R  N  S  N  N  Y  N  K  R  S  Q  K  I  I  Y  V  *  K  K  L  K  Y  T  L  N  F  D  R  R  I  I  Y  T  P  K  *  F  F  L  K  N  R  S  N  K  Y  K  F  *  T  I  F  L  T  S  V  K  *  R  V  Y  V  S  H  F  V  T  A  G  V  Y  V  S  R  L  Y  N  G  K  G  I  Y  E  Q  L  L  *  R  E  V  Y  Q  L  E  M  T  K  L  R  </first_frame>
            <second_frame>  L  L  *  M  T  N  F  F  L  Q  I  R  N  *  I  T  I  H  T  K  K  *  F  K  F  F  F  F  K  L  R  N  E  K  E  K  T  E  *  E  *  E  T  Q  I  I  I  I  K  E  V  K  K  *  F  M  Y  E  K  N  *  N  I  P  *  T  L  I  E  E  S  Y  I  P  L  N  N  F  F  *  K  I  E  V  I  N  I  N  F  K  L  F  F  *  L  P  *  N  E  G  Y  M  *  A  I  L  *  R  Q  G  Y  M  *  V  V  C  I  T  V  R  A  Y  M  S  N  F  Y  N  E  R  Y  I  S  S  K  *  Q  S  *  G </second_frame>
            <third_frame>   Y  C  R  *  P  I  F  F  F  K  Y  E  I  K  L  Q  Y  T  Q  K  N  S  L  N  F  F  S  L  N  *  G  M  K  K  K  K  Q  N  K  N  K  K  L  K  *  L  *  *  K  K  S  K  N  N  L  C  M  K  K  I  K  I  Y  L  K  L  *  *  K  N  H  I  Y  P  *  I  I  F  F  K  K  *  K  *  *  I  *  I  L  N  Y  F  F  N  F  R  K  M  K  G  I  C  E  P  F  C  N  G  R  G  I  C  E  S  F  V  *  R  *  G  H  I  *  A  T  F  I  T  R  G  I  S  A  R  N  D  K  V  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0236E08.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="19402" PGL_stop="19072"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="19402" e_stop="19072"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.991"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.991">
            <gDNA_exon_boundary e_start="19402" e_stop="19072" e_length="331"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19402" stop="19072"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U597467" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CCAATAAACTTTGTGATTGCAGAATGATTTATAAAAGTGAAATCTACATGAAAACAAGTTCTACATGATCCCTACAAGACTTGGTAGGTCAAGTCTGGTGAACGATATAGAAATAACAATACTGTTACCCCTTTTCTACATGAATGAATGTAAAAATAAGCATAAACCCCCAATAATAGTAGTCACAATAAATCAACAATTCAAAGTGACTCCTGAAGCTGTAAACCTTGTCGATTTTTGGAGGGTGGCAACAATGTGCTCGACTTTCTACTTCTACCAATCAAAAGCCTCTTCGAAACTGGAGACATCATTTGATCAGTTGGACTTGTGT</gDNA_template>
            <first_frame> P  I  N  F  V  I  A  E  *  F  I  K  V  K  S  T  *  K  Q  V  L  H  D  P  Y  K  T  W  *  V  K  S  G  E  R  Y  R  N  N  N  T  V  T  P  F  L  H  E  *  M  *  K  *  A  *  T  P  N  N  S  S  H  N  K  S  T  I  Q  S  D  S  *  S  C  K  P  C  R  F  L  E  G  G  N  N  V  L  D  F  L  L  L  P  I  K  S  L  F  E  T  G  D  I  I  *  S  V  G  L  V  </first_frame>
            <second_frame>  Q  *  T  L  *  L  Q  N  D  L  *  K  *  N  L  H  E  N  K  F  Y  M  I  P  T  R  L  G  R  S  S  L  V  N  D  I  E  I  T  I  L  L  P  L  F  Y  M  N  E  C  K  N  K  H  K  P  P  I  I  V  V  T  I  N  Q  Q  F  K  V  T  P  E  A  V  N  L  V  D  F  W  R  V  A  T  M  C  S  T  F  Y  F  Y  Q  S  K  A  S  S  K  L  E  T  S  F  D  Q  L  D  L  C </second_frame>
            <third_frame>   N  K  L  C  D  C  R  M  I  Y  K  S  E  I  Y  M  K  T  S  S  T  *  S  L  Q  D  L  V  G  Q  V  W  *  T  I  *  K  *  Q  Y  C  Y  P  F  S  T  *  M  N  V  K  I  S  I  N  P  Q  *  *  *  S  Q  *  I  N  N  S  K  *  L  L  K  L  *  T  L  S  I  F  G  G  W  Q  Q  C  A  R  L  S  T  S  T  N  Q  K  P  L  R  N  W  R  H  H  L  I  S  W  T  C   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E08.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="19362" stop="19072"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>291</number_coding_nucleotides>
                  <number_encoded_amino_acids>97</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NLHENKFYMIPTRLGRSSLVNDIEITILLPLFYMNECKNKHKPPIIVVTINQQFKVTPEAVNLVDFWRVATMCSTFYFYQSKASSKLETSFDQLDLC</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="23279" PGL_stop="24157"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="23279" e_stop="23548"/>
            <exon e_start="23913" e_stop="24157"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="0.985"/>
          <exon-only e_score="0.931"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.985">
            <gDNA_exon_boundary e_start="23279" e_stop="23548" e_length="270"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="23549" i_stop="23912" i_length="364"/>
          </intron>
          <exon e_serial="2" e_score="0.931">
            <gDNA_exon_boundary e_start="23913" e_stop="24157" e_length="245"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23279" stop="23548"/>
              <exon start="23913" stop="24157"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U597179" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGAAACTAAAATGGAGAGTCCTCGTATGCAAGAAAAGATCATTGAATCGGAGAATCATGAAAATAACATCAAAGTAAACAAGACATCTAATGTCGATGAAGTTCAACATTCTCCCTCAGCGCTCAACAAGTCAGATGAATTACTACATTCTGCCTCAACGCTCAACAAGTCAGATGGTAAAGCAGTTTCTCAGTTTGAGGCAAGTTATGCTTCCTCGCCCCGCCTCTCCAATGAGAGTGGAAACAGCAGCAGCTCCTTTGCTTTTCCATT : ACTACTAAACGATGCTGGGAAAACTGGCTCACTCAAAGCTCCCTCTGCGAAAATGGAGAGACCTCAACCTCAGCCTCAGCATCAGCATCAGCCACAGCCACATCCACATCCACAGCCACAACCACAACCACAACCCAAGTATGAACCAGATTCAGAACCACAAATGCAGCCACAATCACCGCAACAATCAGAGTCATACACGAAATCAGAGTCAAAACAAGCAGAGTCACTGCCAAAACTGGGAG</gDNA_template>
            <first_frame> *  N  *  N  G  E  S  S  Y  A  R  K  D  H  *  I  G  E  S  *  K  *  H  Q  S  K  Q  D  I  *  C  R  *  S  S  T  F  S  L  S  A  Q  Q  V  R  *  I  T  T  F  C  L  N  A  Q  Q  V  R  W  *  S  S  F  S  V  *  G  K  L  C  F  L  A  P  P  L  Q  *  E  W  K  Q  Q  Q  L  L  C  F  S  I  :  T  T  K  R  C  W  E  N  W  L  T  Q  S  S  L  C  E  N  G  E  T  S  T  S  A  S  A  S  A  S  A  T  A  T  S  T  S  T  A  T  T  T  T  T  T  Q  V  *  T  R  F  R  T  T  N  A  A  T  I  T  A  T  I  R  V  I  H  E  I  R  V  K  T  S  R  V  T  A  K  T  G   </first_frame>
            <second_frame>  E  T  K  M  E  S  P  R  M  Q  E  K  I  I  E  S  E  N  H  E  N  N  I  K  V  N  K  T  S  N  V  D  E  V  Q  H  S  P  S  A  L  N  K  S  D  E  L  L  H  S  A  S  T  L  N  K  S  D  G  K  A  V  S  Q  F  E  A  S  Y  A  S  S  P  R  L  S  N  E  S  G  N  S  S  S  S  F  A  F  P  L :   L  L  N  D  A  G  K  T  G  S  L  K  A  P  S  A  K  M  E  R  P  Q  P  Q  P  Q  H  Q  H  Q  P  Q  P  H  P  H  P  Q  P  Q  P  Q  P  Q  P  K  Y  E  P  D  S  E  P  Q  M  Q  P  Q  S  P  Q  Q  S  E  S  Y  T  K  S  E  S  K  Q  A  E  S  L  P  K  L  G  </second_frame>
            <third_frame>   K  L  K  W  R  V  L  V  C  K  K  R  S  L  N  R  R  I  M  K  I  T  S  K  *  T  R  H  L  M  S  M  K  F  N  I  L  P  Q  R  S  T  S  Q  M  N  Y  Y  I  L  P  Q  R  S  T  S  Q  M  V  K  Q  F  L  S  L  R  Q  V  M  L  P  R  P  A  S  P  M  R  V  E  T  A  A  A  P  L  L  F  H   : Y  Y  *  T  M  L  G  K  L  A  H  S  K  L  P  L  R  K  W  R  D  L  N  L  S  L  S  I  S  I  S  H  S  H  I  H  I  H  S  H  N  H  N  H  N  P  S  M  N  Q  I  Q  N  H  K  C  S  H  N  H  R  N  N  Q  S  H  T  R  N  Q  S  Q  N  K  Q  S  H  C  Q  N  W  E </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E08.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="23280" stop="23548"/>
                    <exon start="23913" stop="24156"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>513</number_coding_nucleotides>
                  <number_encoded_amino_acids>171</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ETKMESPRMQEKIIESENHENNIKVNKTSNVDEVQHSPSALNKSDELLHSASTLNKSDGKAVSQFEASYASSPRLSNESGNSSSSFAFPLLLNDAGKTGSLKAPSAKMERPQPQPQHQHQPQPHPHPQPQPQPQPKYEPDSEPQMQPQSPQQSESYTKSESKQAESLPKLG</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="27915" PGL_stop="24593"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="27915" e_stop="27574"/>
            <exon e_start="27086" e_stop="26223"/>
            <exon e_start="26031" e_stop="25557"/>
            <exon e_start="25485" e_stop="24593"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.998" e_score="0.997"/>
          <exon-intron don_prob="0.616" acc_prob="0.999" e_score="0.999"/>
          <exon-intron don_prob="0.997" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="27915" e_stop="27574" e_length="342"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.998">
            <gDNA_intron_boundary i_start="27573" i_stop="27087" i_length="487"/>
          </intron>
          <exon e_serial="2" e_score="0.999">
            <gDNA_exon_boundary e_start="27086" e_stop="26223" e_length="864"/>
          </exon>
          <intron i_serial="2" don_prob="0.616" acc_prob="0.999">
            <gDNA_intron_boundary i_start="26222" i_stop="26032" i_length="191"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="26031" e_stop="25557" e_length="475"/>
          </exon>
          <intron i_serial="3" don_prob="0.997" acc_prob="0.999">
            <gDNA_intron_boundary i_start="25556" i_stop="25486" i_length="71"/>
          </intron>
          <exon e_serial="4" e_score="0.999">
            <gDNA_exon_boundary e_start="25485" e_stop="24593" e_length="893"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27915" stop="27574"/>
              <exon start="27086" stop="26223"/>
              <exon start="26031" stop="25557"/>
              <exon start="25485" stop="24593"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U583426" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGTTGTTACAAATCAGGTTAATGGCAGCAGAGTGAGAGAGAACCCTCGCGGCGTTATAGTCGATGGCCGGAGACAAATTGAAGGCGGGTCTTCCTGGCGGAAAAGCGGCGGAACCGCAGTACCAGGCGGCGAAAACATCGGTGTGGTGGGATATAGAGAATTGTCAGGTGCCCAGGGGATGCGACGCTCATGCAATTGCTCAGAATATAAACGCTGCATTGATGAAGATGAACTATAATGGACCAGTCGCTATTTCCGCCTATGGAGACACAAATCGTATTCCCTCGTACATTCAACGAGCCCTTTCTAGTACTGGAATCAGTCTCAATCACGTCCCGGCCG : GGGCTAAGGATGCTAGTGATAAGAAAATATTGGTGGATATGCTATTTTGGGCAGTGGACAATCCTGCACCTGCCAATTATTTGCTCATTTCAGGAGACAGGGATTTCTCCAATGCCATTCATCAGTTACGGATGAGGAGATATAATATTCTTCTAGCACAGCCTTTTAAGGCTTCTCCTGCTCTTGCTGCTGCTGCCACAAATGTGTGGCAATGGATAAGCCTTGCTGCTGGAGAATCTCCACGAGAACTTACTTTTGGTACTAACACATTACATCAAGAATCTATACCGACTCCAGTTTATGAACCTATATCAGCAAACCAACCTGCATATTCTAATGCCAATACCAATATCAATACCAACGCCAATAATGCCAATGCCAACTCCAACTCCAACGCCAAAGCCAAATCCAAAGCCAATGCCAATGCCAATGCCAACGCCAATATCAATACCAATATCAATACCAGTGCCAACGCCAATATCAATACCAATAGCAATGCCAATGCCAATGCCAATGCCAATACCAATACCACAACCAATGCTAATGCTAATACTAAAACTAAAGTTATTTACGTACCAAAGAACTCAAATCAACTGACTATGACCGGTAGGTCAAGTATGCCAGCTAGAATTGAAGAAACTAGTAGCAGCTATCGCCCACACGCACCAGCTGTTGCACCAGTGCAGTTTGCACCACATATATTTTTCGCAAAGTCTGATAGTTCAGAGAACCATAACAGTAAATTCATAGAAAACAAGCCTGCTCAGCGTACTCAATCTCAGCCTCCTCTTGTTCGAGATAACTTTGTGAAGAAATTCAACTTCCGCCAGAAGAATTTGCAACCTTCGCTTCAACGACCTGAAG : GTAGGGGTGATTTATGTGGTTCTATGAACAAGGGTGATGTATGTCCTGAGTTTTCCTTCCTTCCATCCTCATCGGGTGCTTCTAAATCTGTCTCTGGTAATTCAAATTTGGAACTCCAGCTGCCTGAACTCATTCAAGGTCTTATAGGGGTCATCCTTCTTTCGTTGGACAGTTTGAAGCTCGAGAAGATTGTGCCTACCAAAGAAAACATCGGTTATTGTCTACGTTATGGTAACCCTAAATATCGTCATATTGATGTCACAGTAGCATTAAATGCTGCACTAGAGCAACAGATGATAGTAAAGTTAAAACAAGCTGATATTGAACTATATGTTGGTAGAAATGAGAGGATTTGGAAATGTGAGAATCCACTTGGTGGCAATCCTAACCAATATCACAATGCAACTTGGAACGTGATTGAGAAATTTCTTTGTTCAACTGTTGGACGTTCAGCAATAGCAGCATCTGAATGCAG : GTATGAAGCTGCTTTGATTCTTAGAAATGCATGCCTTAAAGACCTTACATTGGGTGAAGTACTTCAAATCCTGAATATGATTATCACTCTGAAGCGTTGGATTAAAACTCGCTCTGATTGGCATCAGATTACTATTACTCTTCCAGAAACTAATAATGACAATGATACCAGAACATGCATCTAGCCGACAGATCTCTTTTGGTATTTTAGCATGTCATAGCCGTGACATGTTTTCAGAAATGGATTTGATATCTTGGGAGTTACAGATTTTAAAAGAAGCTCAATTTTGTATAAGATGGTATGTTCAGTGCTTACTTGATGACGGCATAGGAGCGAGATCTTTTTTACTTTTGTGGACCTCTTTCCAAGACACTTGCAGCTGATATAAGTGTGCAGCTAAAGGGATGTGATTGTTATCATGCTTCTATCAACCTTGCTATGCTGATGGATCTCGTAATCTTACATTTACAGCAGCATCGTTTCTGCTATCTTCACTTTCTTTATCTTAAAATTTCCTTTTCGCTGGAAATTTTGTTTGCATCAGCAAGTCTACTACTGCTTTCACATTACTTGGATTTGGGGCATCCAGGAATATGCAGATTGTATTTTGGTTACCTTGGTGAGTTGAGAACTGGCCAGAAGCACAAAGGTTTTGGGTTGCAGGTTGACAGGAATATTTTGTAGTCACTGTTCTTCTAGCCAGAATATAAATAATGAAAAGTGGTTTAGAACAGATCCAGTAACCTTGTTTTTTAAGCTTTATCAAATGGAATATGTAGATTTACTTCACCAGCGTTTTTGATAACGTTGTCCTTTTGCCTATTCTTTTTGTTTCTTGGAACTTATGACTGTAAATCACTTCTGCAGATAAGATTATATGTAGCTTTAATTGG</gDNA_template>
            <first_frame> C  C  Y  K  S  G  *  W  Q  Q  S  E  R  E  P  S  R  R  Y  S  R  W  P  E  T  N  *  R  R  V  F  L  A  E  K  R  R  N  R  S  T  R  R  R  K  H  R  C  G  G  I  *  R  I  V  R  C  P  G  D  A  T  L  M  Q  L  L  R  I  *  T  L  H  *  *  R  *  T  I  M  D  Q  S  L  F  P  P  M  E  T  Q  I  V  F  P  R  T  F  N  E  P  F  L  V  L  E  S  V  S  I  T  S  R  P  :  G  L  R  M  L  V  I  R  K  Y  W  W  I  C  Y  F  G  Q  W  T  I  L  H  L  P  I  I  C  S  F  Q  E  T  G  I  S  P  M  P  F  I  S  Y  G  *  G  D  I  I  F  F  *  H  S  L  L  R  L  L  L  L  L  L  L  L  P  Q  M  C  G  N  G  *  A  L  L  L  E  N  L  H  E  N  L  L  L  V  L  T  H  Y  I  K  N  L  Y  R  L  Q  F  M  N  L  Y  Q  Q  T  N  L  H  I  L  M  P  I  P  I  S  I  P  T  P  I  M  P  M  P  T  P  T  P  T  P  K  P  N  P  K  P  M  P  M  P  M  P  T  P  I  S  I  P  I  S  I  P  V  P  T  P  I  S  I  P  I  A  M  P  M  P  M  P  M  P  I  P  I  P  Q  P  M  L  M  L  I  L  K  L  K  L  F  T  Y  Q  R  T  Q  I  N  *  L  *  P  V  G  Q  V  C  Q  L  E  L  K  K  L  V  A  A  I  A  H  T  H  Q  L  L  H  Q  C  S  L  H  H  I  Y  F  S  Q  S  L  I  V  Q  R  T  I  T  V  N  S  *  K  T  S  L  L  S  V  L  N  L  S  L  L  L  F  E  I  T  L  *  R  N  S  T  S  A  R  R  I  C  N  L  R  F  N  D  L  K  :  V  G  V  I  Y  V  V  L  *  T  R  V  M  Y  V  L  S  F  P  S  F  H  P  H  R  V  L  L  N  L  S  L  V  I  Q  I  W  N  S  S  C  L  N  S  F  K  V  L  *  G  S  S  F  F  R  W  T  V  *  S  S  R  R  L  C  L  P  K  K  T  S  V  I  V  Y  V  M  V  T  L  N  I  V  I  L  M  S  Q  *  H  *  M  L  H  *  S  N  R  *  *  *  S  *  N  K  L  I  L  N  Y  M  L  V  E  M  R  G  F  G  N  V  R  I  H  L  V  A  I  L  T  N  I  T  M  Q  L  G  T  *  L  R  N  F  F  V  Q  L  L  D  V  Q  Q  *  Q  H  L  N  A   : G  M  K  L  L  *  F  L  E  M  H  A  L  K  T  L  H  W  V  K  Y  F  K  S  *  I  *  L  S  L  *  S  V  G  L  K  L  A  L  I  G  I  R  L  L  L  L  F  Q  K  L  I  M  T  M  I  P  E  H  A  S  S  R  Q  I  S  F  G  I  L  A  C  H  S  R  D  M  F  S  E  M  D  L  I  S  W  E  L  Q  I  L  K  E  A  Q  F  C  I  R  W  Y  V  Q  C  L  L  D  D  G  I  G  A  R  S  F  L  L  L  W  T  S  F  Q  D  T  C  S  *  Y  K  C  A  A  K  G  M  *  L  L  S  C  F  Y  Q  P  C  Y  A  D  G  S  R  N  L  T  F  T  A  A  S  F  L  L  S  S  L  S  L  S  *  N  F  L  F  A  G  N  F  V  C  I  S  K  S  T  T  A  F  T  L  L  G  F  G  A  S  R  N  M  Q  I  V  F  W  L  P  W  *  V  E  N  W  P  E  A  Q  R  F  W  V  A  G  *  Q  E  Y  F  V  V  T  V  L  L  A  R  I  *  I  M  K  S  G  L  E  Q  I  Q  *  P  C  F  L  S  F  I  K  W  N  M  *  I  Y  F  T  S  V  F  D  N  V  V  L  L  P  I  L  F  V  S  W  N  L  *  L  *  I  T  S  A  D  K  I  I  C  S  F  N  W </first_frame>
            <second_frame>  V  V  T  N  Q  V  N  G  S  R  V  R  E  N  P  R  G  V  I  V  D  G  R  R  Q  I  E  G  G  S  S  W  R  K  S  G  G  T  A  V  P  G  G  E  N  I  G  V  V  G  Y  R  E  L  S  G  A  Q  G  M  R  R  S  C  N  C  S  E  Y  K  R  C  I  D  E  D  E  L  *  W  T  S  R  Y  F  R  L  W  R  H  K  S  Y  S  L  V  H  S  T  S  P  F  *  Y  W  N  Q  S  Q  S  R  P  G  R :   G  *  G  C  *  *  *  E  N  I  G  G  Y  A  I  L  G  S  G  Q  S  C  T  C  Q  L  F  A  H  F  R  R  Q  G  F  L  Q  C  H  S  S  V  T  D  E  E  I  *  Y  S  S  S  T  A  F  *  G  F  S  C  S  C  C  C  C  H  K  C  V  A  M  D  K  P  C  C  W  R  I  S  T  R  T  Y  F  W  Y  *  H  I  T  S  R  I  Y  T  D  S  S  L  *  T  Y  I  S  K  P  T  C  I  F  *  C  Q  Y  Q  Y  Q  Y  Q  R  Q  *  C  Q  C  Q  L  Q  L  Q  R  Q  S  Q  I  Q  S  Q  C  Q  C  Q  C  Q  R  Q  Y  Q  Y  Q  Y  Q  Y  Q  C  Q  R  Q  Y  Q  Y  Q  *  Q  C  Q  C  Q  C  Q  C  Q  Y  Q  Y  H  N  Q  C  *  C  *  Y  *  N  *  S  Y  L  R  T  K  E  L  K  S  T  D  Y  D  R  *  V  K  Y  A  S  *  N  *  R  N  *  *  Q  L  S  P  T  R  T  S  C  C  T  S  A  V  C  T  T  Y  I  F  R  K  V  *  *  F  R  E  P  *  Q  *  I  H  R  K  Q  A  C  S  A  Y  S  I  S  A  S  S  C  S  R  *  L  C  E  E  I  Q  L  P  P  E  E  F  A  T  F  A  S  T  T  *  R :   *  G  *  F  M  W  F  Y  E  Q  G  *  C  M  S  *  V  F  L  P  S  I  L  I  G  C  F  *  I  C  L  W  *  F  K  F  G  T  P  A  A  *  T  H  S  R  S  Y  R  G  H  P  S  F  V  G  Q  F  E  A  R  E  D  C  A  Y  Q  R  K  H  R  L  L  S  T  L  W  *  P  *  I  S  S  Y  *  C  H  S  S  I  K  C  C  T  R  A  T  D  D  S  K  V  K  T  S  *  Y  *  T  I  C  W  *  K  *  E  D  L  E  M  *  E  S  T  W  W  Q  S  *  P  I  S  Q  C  N  L  E  R  D  *  E  I  S  L  F  N  C  W  T  F  S  N  S  S  I  *  M  Q  :  V  *  S  C  F  D  S  *  K  C  M  P  *  R  P  Y  I  G  *  S  T  S  N  P  E  Y  D  Y  H  S  E  A  L  D  *  N  S  L  *  L  A  S  D  Y  Y  Y  S  S  R  N  *  *  *  Q  *  Y  Q  N  M  H  L  A  D  R  S  L  L  V  F  *  H  V  I  A  V  T  C  F  Q  K  W  I  *  Y  L  G  S  Y  R  F  *  K  K  L  N  F  V  *  D  G  M  F  S  A  Y  L  M  T  A  *  E  R  D  L  F  Y  F  C  G  P  L  S  K  T  L  A  A  D  I  S  V  Q  L  K  G  C  D  C  Y  H  A  S  I  N  L  A  M  L  M  D  L  V  I  L  H  L  Q  Q  H  R  F  C  Y  L  H  F  L  Y  L  K  I  S  F  S  L  E  I  L  F  A  S  A  S  L  L  L  L  S  H  Y  L  D  L  G  H  P  G  I  C  R  L  Y  F  G  Y  L  G  E  L  R  T  G  Q  K  H  K  G  F  G  L  Q  V  D  R  N  I  L  *  S  L  F  F  *  P  E  Y  K  *  *  K  V  V  *  N  R  S  S  N  L  V  F  *  A  L  S  N  G  I  C  R  F  T  S  P  A  F  L  I  T  L  S  F  C  L  F  F  L  F  L  G  T  Y  D  C  K  S  L  L  Q  I  R  L  Y  V  A  L  I   </second_frame>
            <third_frame>   L  L  Q  I  R  L  M  A  A  E  *  E  R  T  L  A  A  L  *  S  M  A  G  D  K  L  K  A  G  L  P  G  G  K  A  A  E  P  Q  Y  Q  A  A  K  T  S  V  W  W  D  I  E  N  C  Q  V  P  R  G  C  D  A  H  A  I  A  Q  N  I  N  A  A  L  M  K  M  N  Y  N  G  P  V  A  I  S  A  Y  G  D  T  N  R  I  P  S  Y  I  Q  R  A  L  S  S  T  G  I  S  L  N  H  V  P  A   : G  A  K  D  A  S  D  K  K  I  L  V  D  M  L  F  W  A  V  D  N  P  A  P  A  N  Y  L  L  I  S  G  D  R  D  F  S  N  A  I  H  Q  L  R  M  R  R  Y  N  I  L  L  A  Q  P  F  K  A  S  P  A  L  A  A  A  A  T  N  V  W  Q  W  I  S  L  A  A  G  E  S  P  R  E  L  T  F  G  T  N  T  L  H  Q  E  S  I  P  T  P  V  Y  E  P  I  S  A  N  Q  P  A  Y  S  N  A  N  T  N  I  N  T  N  A  N  N  A  N  A  N  S  N  S  N  A  K  A  K  S  K  A  N  A  N  A  N  A  N  A  N  I  N  T  N  I  N  T  S  A  N  A  N  I  N  T  N  S  N  A  N  A  N  A  N  A  N  T  N  T  T  T  N  A  N  A  N  T  K  T  K  V  I  Y  V  P  K  N  S  N  Q  L  T  M  T  G  R  S  S  M  P  A  R  I  E  E  T  S  S  S  Y  R  P  H  A  P  A  V  A  P  V  Q  F  A  P  H  I  F  F  A  K  S  D  S  S  E  N  H  N  S  K  F  I  E  N  K  P  A  Q  R  T  Q  S  Q  P  P  L  V  R  D  N  F  V  K  K  F  N  F  R  Q  K  N  L  Q  P  S  L  Q  R  P  E   : G  R  G  D  L  C  G  S  M  N  K  G  D  V  C  P  E  F  S  F  L  P  S  S  S  G  A  S  K  S  V  S  G  N  S  N  L  E  L  Q  L  P  E  L  I  Q  G  L  I  G  V  I  L  L  S  L  D  S  L  K  L  E  K  I  V  P  T  K  E  N  I  G  Y  C  L  R  Y  G  N  P  K  Y  R  H  I  D  V  T  V  A  L  N  A  A  L  E  Q  Q  M  I  V  K  L  K  Q  A  D  I  E  L  Y  V  G  R  N  E  R  I  W  K  C  E  N  P  L  G  G  N  P  N  Q  Y  H  N  A  T  W  N  V  I  E  K  F  L  C  S  T  V  G  R  S  A  I  A  A  S  E  C  R :   Y  E  A  A  L  I  L  R  N  A  C  L  K  D  L  T  L  G  E  V  L  Q  I  L  N  M  I  I  T  L  K  R  W  I  K  T  R  S  D  W  H  Q  I  T  I  T  L  P  E  T  N  N  D  N  D  T  R  T  C  I  *  P  T  D  L  F  W  Y  F  S  M  S  *  P  *  H  V  F  R  N  G  F  D  I  L  G  V  T  D  F  K  R  S  S  I  L  Y  K  M  V  C  S  V  L  T  *  *  R  H  R  S  E  I  F  F  T  F  V  D  L  F  P  R  H  L  Q  L  I  *  V  C  S  *  R  D  V  I  V  I  M  L  L  S  T  L  L  C  *  W  I  S  *  S  Y  I  Y  S  S  I  V  S  A  I  F  T  F  F  I  L  K  F  P  F  R  W  K  F  C  L  H  Q  Q  V  Y  Y  C  F  H  I  T  W  I  W  G  I  Q  E  Y  A  D  C  I  L  V  T  L  V  S  *  E  L  A  R  S  T  K  V  L  G  C  R  L  T  G  I  F  C  S  H  C  S  S  S  Q  N  I  N  N  E  K  W  F  R  T  D  P  V  T  L  F  F  K  L  Y  Q  M  E  Y  V  D  L  L  H  Q  R  F  *  *  R  C  P  F  A  Y  S  F  C  F  L  E  L  M  T  V  N  H  F  C  R  *  D  Y  M  *  L  *  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E08.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="27856" stop="27574"/>
                    <exon start="27086" stop="26223"/>
                    <exon start="26031" stop="25557"/>
                    <exon start="25485" stop="25302"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1803</number_coding_nucleotides>
                  <number_encoded_amino_acids>601</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SMAGDKLKAGLPGGKAAEPQYQAAKTSVWWDIENCQVPRGCDAHAIAQNINAALMKMNYNGPVAISAYGDTNRIPSYIQRALSSTGISLNHVPAGAKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNAIHQLRMRRYNILLAQPFKASPALAAAATNVWQWISLAAGESPRELTFGTNTLHQESIPTPVYEPISANQPAYSNANTNINTNANNANANSNSNAKAKSKANANANANANINTNINTSANANINTNSNANANANANTNTTTNANANTKTKVIYVPKNSNQLTMTGRSSMPARIEETSSSYRPHAPAVAPVQFAPHIFFAKSDSSENHNSKFIENKPAQRTQSQPPLVRDNFVKKFNFRQKNLQPSLQRPEGRGDLCGSMNKGDVCPEFSFLPSSSGASKSVSGNSNLELQLPELIQGLIGVILLSLDSLKLEKIVPTKENIGYCLRYGNPKYRHIDVTVALNAALEQQMIVKLKQADIELYVGRNERIWKCENPLGGNPNQYHNATWNVIEKFLCSTVGRSAIAASECRYEAALILRNACLKDLTLGEVLQILNMIITLKRWIKTRSDWHQITITLPETNNDNDTRTCI*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E08.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="25155" stop="24802"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>351</number_coding_nucleotides>
                  <number_encoded_amino_acids>117</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ERDLFYFCGPLSKTLAADISVQLKGCDCYHASINLAMLMDLVILHLQQHRFCYLHFLYLKISFSLEILFASASLLLLSHYLDLGHPGICRLYFGYLGELRTGQKHKGFGLQVDRNIL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="-" PGL_start="52080" PGL_stop="50076"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="52080" e_stop="51956"/>
            <exon e_start="50986" e_stop="50721"/>
            <exon e_start="50641" e_stop="50547"/>
            <exon e_start="50113" e_stop="50076"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.847" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.338" e_score="1.000"/>
          <exon-intron don_prob="0.958" acc_prob="0.954" e_score="1.000"/>
          <exon-only e_score="0.974"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="52080" e_stop="51956" e_length="125"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.847">
            <gDNA_intron_boundary i_start="51955" i_stop="50987" i_length="969"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="50986" e_stop="50721" e_length="266"/>
          </exon>
          <intron i_serial="2" don_prob="0.993" acc_prob="0.338">
            <gDNA_intron_boundary i_start="50720" i_stop="50642" i_length="79"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="50641" e_stop="50547" e_length="95"/>
          </exon>
          <intron i_serial="3" don_prob="0.958" acc_prob="0.954">
            <gDNA_intron_boundary i_start="50546" i_stop="50114" i_length="433"/>
          </intron>
          <exon e_serial="4" e_score="0.974">
            <gDNA_exon_boundary e_start="50113" e_stop="50076" e_length="38"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52080" stop="51956"/>
              <exon start="50986" stop="50721"/>
              <exon start="50641" stop="50547"/>
              <exon start="50113" stop="50076"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U604139" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACAGTTTATCAGGTCACTGGAATATTTGCTGAGGCGCTTAGGCTGGTCCTAACTCAAGTTCTGCTTCAGAAGAAGGGACTAACTCTCAATCCTATCACCAGCCTATATTACATAGCTCCATGCAG : CTTTGTCTTTCTCTTTGTCCCATGGTATCTTCTGGAGAAGCCGGAGATGGAAGTCTCACAAATTCAATTCAACTTCTGGATATTCTTTTCAAATGCACTTTGTGCTCTTGCTCTGAATTTCTCTATCTTCTTAGTGATTGGTAGAACCGGTGCTGTAACCATCCGAGTTGCCGGTGTCTTGAAAGATTGGATACTTATTGCCCTTTCAACGCTAATTTTCCCAGAGTCGACAATAACCACACTTAATATTACAGGCTATGCCATTG : CATTATGTGGTGTTGTGATGTATAACTACTTGAAGATCAAGGATGTTCGAGCTGTTCAACTTCCTGTAGATAGTGTTTCTGATCGAATAGCGAAG : GAACTTAAAATGGAGAAGAAGTCATCCGATCTGTATGT</gDNA_template>
            <first_frame> T  V  Y  Q  V  T  G  I  F  A  E  A  L  R  L  V  L  T  Q  V  L  L  Q  K  K  G  L  T  L  N  P  I  T  S  L  Y  Y  I  A  P  C  S :   F  V  F  L  F  V  P  W  Y  L  L  E  K  P  E  M  E  V  S  Q  I  Q  F  N  F  W  I  F  F  S  N  A  L  C  A  L  A  L  N  F  S  I  F  L  V  I  G  R  T  G  A  V  T  I  R  V  A  G  V  L  K  D  W  I  L  I  A  L  S  T  L  I  F  P  E  S  T  I  T  T  L  N  I  T  G  Y  A  I   : A  L  C  G  V  V  M  Y  N  Y  L  K  I  K  D  V  R  A  V  Q  L  P  V  D  S  V  S  D  R  I  A  K  :  E  L  K  M  E  K  K  S  S  D  L  Y   </first_frame>
            <second_frame>  Q  F  I  R  S  L  E  Y  L  L  R  R  L  G  W  S  *  L  K  F  C  F  R  R  R  D  *  L  S  I  L  S  P  A  Y  I  T  *  L  H  A   : A  L  S  F  S  L  S  H  G  I  F  W  R  S  R  R  W  K  S  H  K  F  N  S  T  S  G  Y  S  F  Q  M  H  F  V  L  L  L  *  I  S  L  S  S  *  *  L  V  E  P  V  L  *  P  S  E  L  P  V  S  *  K  I  G  Y  L  L  P  F  Q  R  *  F  S  Q  S  R  Q  *  P  H  L  I  L  Q  A  M  P  L  :  H  Y  V  V  L  *  C  I  T  T  *  R  S  R  M  F  E  L  F  N  F  L  *  I  V  F  L  I  E  *  R  R :   N  L  K  W  R  R  S  H  P  I  C  M  </second_frame>
            <third_frame>   S  L  S  G  H  W  N  I  C  *  G  A  *  A  G  P  N  S  S  S  A  S  E  E  G  T  N  S  Q  S  Y  H  Q  P  I  L  H  S  S  M  Q  :  L  C  L  S  L  C  P  M  V  S  S  G  E  A  G  D  G  S  L  T  N  S  I  Q  L  L  D  I  L  F  K  C  T  L  C  S  C  S  E  F  L  Y  L  L  S  D  W  *  N  R  C  C  N  H  P  S  C  R  C  L  E  R  L  D  T  Y  C  P  F  N  A  N  F  P  R  V  D  N  N  H  T  *  Y  Y  R  L  C  H  C :   I  M  W  C  C  D  V  *  L  L  E  D  Q  G  C  S  S  C  S  T  S  C  R  *  C  F  *  S  N  S  E   : G  T  *  N  G  E  E  V  I  R  S  V  C </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E08.1" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="52080" stop="51956"/>
                    <exon start="50986" stop="50721"/>
                    <exon start="50641" stop="50547"/>
                    <exon start="50113" stop="50078"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>522</number_coding_nucleotides>
                  <number_encoded_amino_acids>174</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TVYQVTGIFAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFVPWYLLEKPEMEVSQIQFNFWIFFSNALCALALNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTLIFPESTITTLNITGYAIALCGVVMYNYLKIKDVRAVQLPVDSVSDRIAKELKMEKKSSDLY</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="64474" PGL_stop="61492"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="64474" e_stop="63747"/>
            <exon e_start="62406" e_stop="61492"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.993" acc_prob="0.987" e_score="0.999"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="64474" e_stop="63747" e_length="728"/>
          </exon>
          <intron i_serial="1" don_prob="0.993" acc_prob="0.987">
            <gDNA_intron_boundary i_start="63746" i_stop="62407" i_length="1340"/>
          </intron>
          <exon e_serial="2" e_score="0.998">
            <gDNA_exon_boundary e_start="62406" e_stop="61492" e_length="915"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64474" stop="63747"/>
              <exon start="62406" stop="61492"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U564053" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGTTGTTCCTCTTTTTCTCTGTTTTTCTTTATATGGCTCAAGTTAACTCTTTTGCCGGCGAATTCAGGAACTCCGGCAACTACATTCTCTAACGTTTACAGAATTTTCTGTTTATTATAATTGAATTAAAAAGTTGTTTGGAGTTTTGGGGTTTGGTTTGTTTAAAATGGCTGAAGCTGAAGAAAATAGAGAAAAGAGGTGTTTTTCTAGTATGCAGATGGAAGTTTTTTCAAGAGATCTGTTGCATAAATTTATGAATGGAAACAACAATAAATTTCATGAAATTCCTAATGAGGAAGATGAATTGGAGCTGAGTTTGGGGCTTTCCTTGAATGGAAGATTTGGGGTAGACCCAGAAAGGGCTAAGAGACTAAAACGCTCTTCTTCAATTTCAAACTTTGTGTTTTCCGGCGGGGATGAGAGTAATGGGCGTTGTTCATTCTCTGTTGGTCCGATTGCGAGGACGTGTTCTTTACCTGTTGAGGGTGAGGAGGAGTGCAGAAAAAGGAAGGAGTTGCAATCTCTGAGGCGTTTGGAGGCTAAAAGAAAGAGAATGGAGAAATTACGAGTGGTTAAGGATAAGGTTGATTTAGATGAACGTCCTGAAGAAAATGGTGGGAGTAATAATGGTCCAGTTGGAAATTCATTGCCTCTGTCACAAGGGTCTATGGCTTCTCAGGGAAGTGGTTCTTCAGGAATTTCTGATTTTGGGAGTCAACCCATTCAAG : GGCCAGGTGACAACAGTACTGGGGCAAATACTCCGACTAGCATCAAGCCTTCAGAGCAAGAACATGAACAGAAACAGGTTGCCAAACCACCTAAAATCACAAGCGAAAAACCACCTACCACATGTAATGGAAGTGCCAGCAAGGAAGCGAAAGAAATGTTCAAAAACTACATGCTCAACATGCCCTGTGTTTCCACAATGGGCAAGGGGCCAAATGGTAAGAAGATTGAAGGATTTCTGTACAGATATCAGAAGGGAGAGGAAGTAAAAATAATGTGTGTTTGTCATGGTAACTTTCTCTCCCCAGCTGAGTTTGTGAAACATGCTGGTGGCGGTGATGTTGCAAATCCGTTGAAGCAAATTGTCGTCAATCCTTCACCTCTGTTGAGATGATGCCAGTGGAACTCTATAATGACACAGAAAAGGGGCAAAGCTTCAAGAATTCAGCTTTGCTATCATCGTTCATCTTCTTTTGTAACATGGACCAAGGTTCTTTTTTTATTTTCGAGTAGATAGTAGTTTCTTGCGGGATATTGCATAATCAATGGGCAAGTTTATCCCCTTTCTGTGGGGAAAAAAAATTTAAGAATTCCCATTGGCATTTATCTTTCAGTTATTCGTTATTTGGAAGTCCGCATTAATTTTTCGTACATGAAGGGACTGTAGAGTGCAGTTGGTTCCATATCGGTTTCAACACGAAATGTGACTTTTGAAGGGGTGGTATTATCAGCAAAGTCTAACAAGCTTGACCAGCCTTTGCTCTTAACTGTTGCAGTTTCATGGCGTTAAAGAGTCGTCGGATTACTTGAAAATTTTCTTAGTGCTCTTCTCTCTTCAATGCGGCCTTTGTTTCTAACGATAACGTTAGTAATTCCATGTAAAATATATTAGTTAACAATGATTTTTTGTTCGCTTC</gDNA_template>
            <first_frame> S  C  S  S  F  S  L  F  F  F  I  W  L  K  L  T  L  L  P  A  N  S  G  T  P  A  T  T  F  S  N  V  Y  R  I  F  C  L  L  *  L  N  *  K  V  V  W  S  F  G  V  W  F  V  *  N  G  *  S  *  R  K  *  R  K  E  V  F  F  *  Y  A  D  G  S  F  F  K  R  S  V  A  *  I  Y  E  W  K  Q  Q  *  I  S  *  N  S  *  *  G  R  *  I  G  A  E  F  G  A  F  L  E  W  K  I  W  G  R  P  R  K  G  *  E  T  K  T  L  F  F  N  F  K  L  C  V  F  R  R  G  *  E  *  W  A  L  F  I  L  C  W  S  D  C  E  D  V  F  F  T  C  *  G  *  G  G  V  Q  K  K  E  G  V  A  I  S  E  A  F  G  G  *  K  K  E  N  G  E  I  T  S  G  *  G  *  G  *  F  R  *  T  S  *  R  K  W  W  E  *  *  W  S  S  W  K  F  I  A  S  V  T  R  V  Y  G  F  S  G  K  W  F  F  R  N  F  *  F  W  E  S  T  H  S  R :   A  R  *  Q  Q  Y  W  G  K  Y  S  D  *  H  Q  A  F  R  A  R  T  *  T  E  T  G  C  Q  T  T  *  N  H  K  R  K  T  T  Y  H  M  *  W  K  C  Q  Q  G  S  E  R  N  V  Q  K  L  H  A  Q  H  A  L  C  F  H  N  G  Q  G  A  K  W  *  E  D  *  R  I  S  V  Q  I  S  E  G  R  G  S  K  N  N  V  C  L  S  W  *  L  S  L  P  S  *  V  C  E  T  C  W  W  R  *  C  C  K  S  V  E  A  N  C  R  Q  S  F  T  S  V  E  M  M  P  V  E  L  Y  N  D  T  E  K  G  Q  S  F  K  N  S  A  L  L  S  S  F  I  F  F  C  N  M  D  Q  G  S  F  F  I  F  E  *  I  V  V  S  C  G  I  L  H  N  Q  W  A  S  L  S  P  F  C  G  E  K  K  F  K  N  S  H  W  H  L  S  F  S  Y  S  L  F  G  S  P  H  *  F  F  V  H  E  G  T  V  E  C  S  W  F  H  I  G  F  N  T  K  C  D  F  *  R  G  G  I  I  S  K  V  *  Q  A  *  P  A  F  A  L  N  C  C  S  F  M  A  L  K  S  R  R  I  T  *  K  F  S  *  C  S  S  L  F  N  A  A  F  V  S  N  D  N  V  S  N  S  M  *  N  I  L  V  N  N  D  F  L  F  A   </first_frame>
            <second_frame>  V  V  P  L  F  L  C  F  S  L  Y  G  S  S  *  L  F  C  R  R  I  Q  E  L  R  Q  L  H  S  L  T  F  T  E  F  S  V  Y  Y  N  *  I  K  K  L  F  G  V  L  G  F  G  L  F  K  M  A  E  A  E  E  N  R  E  K  R  C  F  S  S  M  Q  M  E  V  F  S  R  D  L  L  H  K  F  M  N  G  N  N  N  K  F  H  E  I  P  N  E  E  D  E  L  E  L  S  L  G  L  S  L  N  G  R  F  G  V  D  P  E  R  A  K  R  L  K  R  S  S  S  I  S  N  F  V  F  S  G  G  D  E  S  N  G  R  C  S  F  S  V  G  P  I  A  R  T  C  S  L  P  V  E  G  E  E  E  C  R  K  R  K  E  L  Q  S  L  R  R  L  E  A  K  R  K  R  M  E  K  L  R  V  V  K  D  K  V  D  L  D  E  R  P  E  E  N  G  G  S  N  N  G  P  V  G  N  S  L  P  L  S  Q  G  S  M  A  S  Q  G  S  G  S  S  G  I  S  D  F  G  S  Q  P  I  Q   : G  P  G  D  N  S  T  G  A  N  T  P  T  S  I  K  P  S  E  Q  E  H  E  Q  K  Q  V  A  K  P  P  K  I  T  S  E  K  P  P  T  T  C  N  G  S  A  S  K  E  A  K  E  M  F  K  N  Y  M  L  N  M  P  C  V  S  T  M  G  K  G  P  N  G  K  K  I  E  G  F  L  Y  R  Y  Q  K  G  E  E  V  K  I  M  C  V  C  H  G  N  F  L  S  P  A  E  F  V  K  H  A  G  G  G  D  V  A  N  P  L  K  Q  I  V  V  N  P  S  P  L  L  R  *  C  Q  W  N  S  I  M  T  Q  K  R  G  K  A  S  R  I  Q  L  C  Y  H  R  S  S  S  F  V  T  W  T  K  V  L  F  L  F  S  S  R  *  *  F  L  A  G  Y  C  I  I  N  G  Q  V  Y  P  L  S  V  G  K  K  N  L  R  I  P  I  G  I  Y  L  S  V  I  R  Y  L  E  V  R  I  N  F  S  Y  M  K  G  L  *  S  A  V  G  S  I  S  V  S  T  R  N  V  T  F  E  G  V  V  L  S  A  K  S  N  K  L  D  Q  P  L  L  L  T  V  A  V  S  W  R  *  R  V  V  G  L  L  E  N  F  L  S  A  L  L  S  S  M  R  P  L  F  L  T  I  T  L  V  I  P  C  K  I  Y  *  L  T  M  I  F  C  S  L  </second_frame>
            <third_frame>   L  F  L  F  F  S  V  F  L  Y  M  A  Q  V  N  S  F  A  G  E  F  R  N  S  G  N  Y  I  L  *  R  L  Q  N  F  L  F  I  I  I  E  L  K  S  C  L  E  F  W  G  L  V  C  L  K  W  L  K  L  K  K  I  E  K  R  G  V  F  L  V  C  R  W  K  F  F  Q  E  I  C  C  I  N  L  *  M  E  T  T  I  N  F  M  K  F  L  M  R  K  M  N  W  S  *  V  W  G  F  P  *  M  E  D  L  G  *  T  Q  K  G  L  R  D  *  N  A  L  L  Q  F  Q  T  L  C  F  P  A  G  M  R  V  M  G  V  V  H  S  L  L  V  R  L  R  G  R  V  L  Y  L  L  R  V  R  R  S  A  E  K  G  R  S  C  N  L  *  G  V  W  R  L  K  E  R  E  W  R  N  Y  E  W  L  R  I  R  L  I  *  M  N  V  L  K  K  M  V  G  V  I  M  V  Q  L  E  I  H  C  L  C  H  K  G  L  W  L  L  R  E  V  V  L  Q  E  F  L  I  L  G  V  N  P  F  K  :  G  Q  V  T  T  V  L  G  Q  I  L  R  L  A  S  S  L  Q  S  K  N  M  N  R  N  R  L  P  N  H  L  K  S  Q  A  K  N  H  L  P  H  V  M  E  V  P  A  R  K  R  K  K  C  S  K  T  T  C  S  T  C  P  V  F  P  Q  W  A  R  G  Q  M  V  R  R  L  K  D  F  C  T  D  I  R  R  E  R  K  *  K  *  C  V  F  V  M  V  T  F  S  P  Q  L  S  L  *  N  M  L  V  A  V  M  L  Q  I  R  *  S  K  L  S  S  I  L  H  L  C  *  D  D  A  S  G  T  L  *  *  H  R  K  G  A  K  L  Q  E  F  S  F  A  I  I  V  H  L  L  L  *  H  G  P  R  F  F  F  Y  F  R  V  D  S  S  F  L  R  D  I  A  *  S  M  G  K  F  I  P  F  L  W  G  K  K  I  *  E  F  P  L  A  F  I  F  Q  L  F  V  I  W  K  S  A  L  I  F  R  T  *  R  D  C  R  V  Q  L  V  P  Y  R  F  Q  H  E  M  *  L  L  K  G  W  Y  Y  Q  Q  S  L  T  S  L  T  S  L  C  S  *  L  L  Q  F  H  G  V  K  E  S  S  D  Y  L  K  I  F  L  V  L  F  S  L  Q  C  G  L  C  F  *  R  *  R  *  *  F  H  V  K  Y  I  S  *  Q  *  F  F  V  R  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E08.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="64350" stop="63747"/>
                    <exon start="62406" stop="62015"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>993</number_coding_nucleotides>
                  <number_encoded_amino_acids>331</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IKKLFGVLGFGLFKMAEAEENREKRCFSSMQMEVFSRDLLHKFMNGNNNKFHEIPNEEDELELSLGLSLNGRFGVDPERAKRLKRSSSISNFVFSGGDESNGRCSFSVGPIARTCSLPVEGEEECRKRKELQSLRRLEAKRKRMEKLRVVKDKVDLDERPEENGGSNNGPVGNSLPLSQGSMASQGSGSSGISDFGSQPIQGPGDNSTGANTPTSIKPSEQEHEQKQVAKPPKITSEKPPTTCNGSASKEAKEMFKNYMLNMPCVSTMGKGPNGKKIEGFLYRYQKGEEVKIMCVCHGNFLSPAEFVKHAGGGDVANPLKQIVVNPSPLLR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="75670" PGL_stop="70617"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="75670" e_stop="75515"/>
            <exon e_start="74564" e_stop="74513"/>
            <exon e_start="73952" e_stop="73766"/>
            <exon e_start="72841" e_stop="72544"/>
            <exon e_start="72462" e_stop="72064"/>
            <exon e_start="71799" e_stop="71678"/>
            <exon e_start="71567" e_stop="71502"/>
            <exon e_start="71170" e_stop="71107"/>
            <exon e_start="70971" e_stop="70617"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.330" acc_prob="0.981" e_score="1.000"/>
          <exon-intron don_prob="0.893" acc_prob="0.984" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.817" e_score="1.000"/>
          <exon-intron don_prob="0.972" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.995" e_score="0.984"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="75670" e_stop="75515" e_length="156"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.999">
            <gDNA_intron_boundary i_start="75514" i_stop="74565" i_length="950"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="74564" e_stop="74513" e_length="52"/>
          </exon>
          <intron i_serial="2" don_prob="0.330" acc_prob="0.981">
            <gDNA_intron_boundary i_start="74512" i_stop="73953" i_length="560"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="73952" e_stop="73766" e_length="187"/>
          </exon>
          <intron i_serial="3" don_prob="0.893" acc_prob="0.984">
            <gDNA_intron_boundary i_start="73765" i_stop="72842" i_length="924"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="72841" e_stop="72544" e_length="298"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="0.992">
            <gDNA_intron_boundary i_start="72543" i_stop="72463" i_length="81"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="72462" e_stop="72064" e_length="399"/>
          </exon>
          <intron i_serial="5" don_prob="1.000" acc_prob="0.817">
            <gDNA_intron_boundary i_start="72063" i_stop="71800" i_length="264"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="71799" e_stop="71678" e_length="122"/>
          </exon>
          <intron i_serial="6" don_prob="0.972" acc_prob="0.998">
            <gDNA_intron_boundary i_start="71677" i_stop="71568" i_length="110"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="71567" e_stop="71502" e_length="66"/>
          </exon>
          <intron i_serial="7" don_prob="0.999" acc_prob="0.998">
            <gDNA_intron_boundary i_start="71501" i_stop="71171" i_length="331"/>
          </intron>
          <exon e_serial="8" e_score="0.984">
            <gDNA_exon_boundary e_start="71170" e_stop="71107" e_length="64"/>
          </exon>
          <intron i_serial="8" don_prob="0.986" acc_prob="0.995">
            <gDNA_intron_boundary i_start="71106" i_stop="70972" i_length="135"/>
          </intron>
          <exon e_serial="9" e_score="0.997">
            <gDNA_exon_boundary e_start="70971" e_stop="70617" e_length="355"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75670" stop="75515"/>
              <exon start="74564" stop="74513"/>
              <exon start="73952" stop="73766"/>
              <exon start="72841" stop="72544"/>
              <exon start="72462" stop="72064"/>
              <exon start="71799" stop="71678"/>
              <exon start="71567" stop="71502"/>
              <exon start="71170" stop="71107"/>
              <exon start="70971" stop="70617"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U582782" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAAGCTTGCCGACTCCTACTCATATCGTTCACTATTGAAGTTTAGTTTTTGGCTTAATTGTCAGTCCCTTTCATCGGCTTAACTACATAATAATAGTTGCTTCCGTAAAACTCATCAAATCTACAAAAATCTGTCTTCCTTTCGCTTTCTTCTAAG : TGTCTGTCTCCCCATACTTGAGTCGAGGGATAAGGCTGCTTACACACTACAT : AATGGCTATGGAAACTACAGCTATACCTTCTGCCCCTGCTGCACAAGTGATCGGAAATGCTTTTGTTGAGCAGTATTACCAAATTCAACACCACTCCCCAGAGTTGGTATACAGATTTTGTCTGGATTCAAGTGTCTTAAGCCGCCCAAATTCTAATGGCGTGATGACATCCGTGACAACAATGAAA : AATATCAATGACATGATATGCTCATTAGGCTACAAGAATTATAAGGCAGAGATAAAGACTGCAGATGCACAACAGTCCTACAAGGATGGGGTCATTGTATTGGTTACTGGATGCTTAACTGGAAAAGATAACACGAGAAAGCAATTCACCCAGACTTTTTTCCTTGCTCCACAGGACAAAGGCTACTTTGTTTTGAATGATGTTCTTAGGTATGCAGAACAAGTGGAGACTGATAACAGTTCAGAAATGGTTAATGCGGTCAAGGATGTAGCACCCGTGCCTTTGACGCCTGATCCAG : AACCAGTTCATGTGCTTCAGCCTTCGAATCACAGACAGCCTAGCTCTCATGCAGAAGATATAAAAATTGTTGAGGAAGTAGTTCATGGTTCTTTGGAAAATGAGAAGGTAGTTGGTGATGAAAGAGAGATTATGGTGGGTGCTGAATCCCATATTAATGCAGAACCAGCTACTTCAGTTTCCCGAGAAGATGCTCCTAAGAAATCTTATGCTTCAATTGTAAGTTCTCAAACAAAGAAAGGGCCCGCCAAAATCTATGTACCCTCTAATTCAAGAATGGCTCCCGCAAAGACTGAAAAGCAGCCAGTTAAGTCAGTGGCACAAGCTCCTGTTCCTGAATCATCAATTCATACTGCCTCTGGGGGTAATGCATCTGAATCTAAAGATGCTCAGTACAGAG : CTGAGGGACACTCCATTTATATCCGCAATTTGCCTTTAAATGTTACTGTTGCTCAACTTGAGGTTGAATTTAAGAGATTTGGACCCATTATGCAAGGAGGCATACAAGTTAGAAGTAATAGG : CAACAAGGATTCTGCTTCGGGTTTGTTGAATTTGAAGATTTGAACTCCATGAACAGCGCGATACAG : GCCTCACCTGTTACAATTGGAGGTCTTCAAGCTGAGCTTGAAATAAAGCGAACTACAAGTAGAG : TTGGTAGCGGGAGAGGTCGTTTCCCTACCGGAAGAGGAGCAGGGTACCGAAATGAAAATTTCAGGGGCCGCGGAAACTTTAGTGGTGCAGGTAGAGGATATGGTAGAAGTGATTTTAATGGAGGTCGTGGAGGACGAGGTGGTGAAAGTTACCAACAAGGAAGAGGGAGAGGCGGACGGAGAGGTGGCCTAAGCCAAATTCCTTCTTCAGCATAGAAGTTTTATGTTGCAAATTTTGACGGTGTTTCCTTCTTCAGCATAGAAGTTTTGTGTTGCAAATTTTGACCAAGCTTTGTGTTGCCATTGGCACCAACAGGTTAATTGTGCAGTTTAGTTTGATATTTTTCTTATTATAC</gDNA_template>
            <first_frame> K  A  C  R  L  L  L  I  S  F  T  I  E  V  *  F  L  A  *  L  S  V  P  F  I  G  L  T  T  *  *  *  L  L  P  *  N  S  S  N  L  Q  K  S  V  F  L  S  L  S  S  K  :  C  L  S  P  H  T  *  V  E  G  *  G  C  L  H  T  T   : *  W  L  W  K  L  Q  L  Y  L  L  P  L  L  H  K  *  S  E  M  L  L  L  S  S  I  T  K  F  N  T  T  P  Q  S  W  Y  T  D  F  V  W  I  Q  V  S  *  A  A  Q  I  L  M  A  *  *  H  P  *  Q  Q  *  K :   I  S  M  T  *  Y  A  H  *  A  T  R  I  I  R  Q  R  *  R  L  Q  M  H  N  S  P  T  R  M  G  S  L  Y  W  L  L  D  A  *  L  E  K  I  T  R  E  S  N  S  P  R  L  F  S  L  L  H  R  T  K  A  T  L  F  *  M  M  F  L  G  M  Q  N  K  W  R  L  I  T  V  Q  K  W  L  M  R  S  R  M  *  H  P  C  L  *  R  L  I  Q  :  N  Q  F  M  C  F  S  L  R  I  T  D  S  L  A  L  M  Q  K  I  *  K  L  L  R  K  *  F  M  V  L  W  K  M  R  R  *  L  V  M  K  E  R  L  W  W  V  L  N  P  I  L  M  Q  N  Q  L  L  Q  F  P  E  K  M  L  L  R  N  L  M  L  Q  L  *  V  L  K  Q  R  K  G  P  P  K  S  M  Y  P  L  I  Q  E  W  L  P  Q  R  L  K  S  S  Q  L  S  Q  W  H  K  L  L  F  L  N  H  Q  F  I  L  P  L  G  V  M  H  L  N  L  K  M  L  S  T  E  :  L  R  D  T  P  F  I  S  A  I  C  L  *  M  L  L  L  L  N  L  R  L  N  L  R  D  L  D  P  L  C  K  E  A  Y  K  L  E  V  I  G :   N  K  D  S  A  S  G  L  L  N  L  K  I  *  T  P  *  T  A  R  Y  R :   P  H  L  L  Q  L  E  V  F  K  L  S  L  K  *  S  E  L  Q  V  E  :  L  V  A  G  E  V  V  S  L  P  E  E  E  Q  G  T  E  M  K  I  S  G  A  A  E  T  L  V  V  Q  V  E  D  M  V  E  V  I  L  M  E  V  V  E  D  E  V  V  K  V  T  N  K  E  E  G  E  A  D  G  E  V  A  *  A  K  F  L  L  Q  H  R  S  F  M  L  Q  I  L  T  V  F  P  S  S  A  *  K  F  C  V  A  N  F  D  Q  A  L  C  C  H  W  H  Q  Q  V  N  C  A  V  *  F  D  I  F  L  I  I  </first_frame>
            <second_frame>  K  L  A  D  S  Y  S  Y  R  S  L  L  K  F  S  F  W  L  N  C  Q  S  L  S  S  A  *  L  H  N  N  S  C  F  R  K  T  H  Q  I  Y  K  N  L  S  S  F  R  F  L  L  S :   V  C  L  P  I  L  E  S  R  D  K  A  A  Y  T  L  H  :  N  G  Y  G  N  Y  S  Y  T  F  C  P  C  C  T  S  D  R  K  C  F  C  *  A  V  L  P  N  S  T  P  L  P  R  V  G  I  Q  I  L  S  G  F  K  C  L  K  P  P  K  F  *  W  R  D  D  I  R  D  N  N  E   : K  Y  Q  *  H  D  M  L  I  R  L  Q  E  L  *  G  R  D  K  D  C  R  C  T  T  V  L  Q  G  W  G  H  C  I  G  Y  W  M  L  N  W  K  R  *  H  E  K  A  I  H  P  D  F  F  P  C  S  T  G  Q  R  L  L  C  F  E  *  C  S  *  V  C  R  T  S  G  D  *  *  Q  F  R  N  G  *  C  G  Q  G  C  S  T  R  A  F  D  A  *  S  R :   T  S  S  C  A  S  A  F  E  S  Q  T  A  *  L  S  C  R  R  Y  K  N  C  *  G  S  S  S  W  F  F  G  K  *  E  G  S  W  *  *  K  R  D  Y  G  G  C  *  I  P  Y  *  C  R  T  S  Y  F  S  F  P  R  R  C  S  *  E  I  L  C  F  N  C  K  F  S  N  K  E  R  A  R  Q  N  L  C  T  L  *  F  K  N  G  S  R  K  D  *  K  A  A  S  *  V  S  G  T  S  S  C  S  *  I  I  N  S  Y  C  L  W  G  *  C  I  *  I  *  R  C  S  V  Q  S :   *  G  T  L  H  L  Y  P  Q  F  A  F  K  C  Y  C  C  S  T  *  G  *  I  *  E  I  W  T  H  Y  A  R  R  H  T  S  *  K  *  *   : A  T  R  I  L  L  R  V  C  *  I  *  R  F  E  L  H  E  Q  R  D  T   : G  L  T  C  Y  N  W  R  S  S  S  *  A  *  N  K  A  N  Y  K  *  S :   W  *  R  E  R  S  F  P  Y  R  K  R  S  R  V  P  K  *  K  F  Q  G  P  R  K  L  *  W  C  R  *  R  I  W  *  K  *  F  *  W  R  S  W  R  T  R  W  *  K  L  P  T  R  K  R  E  R  R  T  E  R  W  P  K  P  N  S  F  F  S  I  E  V  L  C  C  K  F  *  R  C  F  L  L  Q  H  R  S  F  V  L  Q  I  L  T  K  L  C  V  A  I  G  T  N  R  L  I  V  Q  F  S  L  I  F  F  L  L  Y </second_frame>
            <third_frame>   S  L  P  T  P  T  H  I  V  H  Y  *  S  L  V  F  G  L  I  V  S  P  F  H  R  L  N  Y  I  I  I  V  A  S  V  K  L  I  K  S  T  K  I  C  L  P  F  A  F  F  *   : V  S  V  S  P  Y  L  S  R  G  I  R  L  L  T  H  Y  I :   M  A  M  E  T  T  A  I  P  S  A  P  A  A  Q  V  I  G  N  A  F  V  E  Q  Y  Y  Q  I  Q  H  H  S  P  E  L  V  Y  R  F  C  L  D  S  S  V  L  S  R  P  N  S  N  G  V  M  T  S  V  T  T  M  K  :  N  I  N  D  M  I  C  S  L  G  Y  K  N  Y  K  A  E  I  K  T  A  D  A  Q  Q  S  Y  K  D  G  V  I  V  L  V  T  G  C  L  T  G  K  D  N  T  R  K  Q  F  T  Q  T  F  F  L  A  P  Q  D  K  G  Y  F  V  L  N  D  V  L  R  Y  A  E  Q  V  E  T  D  N  S  S  E  M  V  N  A  V  K  D  V  A  P  V  P  L  T  P  D  P   : E  P  V  H  V  L  Q  P  S  N  H  R  Q  P  S  S  H  A  E  D  I  K  I  V  E  E  V  V  H  G  S  L  E  N  E  K  V  V  G  D  E  R  E  I  M  V  G  A  E  S  H  I  N  A  E  P  A  T  S  V  S  R  E  D  A  P  K  K  S  Y  A  S  I  V  S  S  Q  T  K  K  G  P  A  K  I  Y  V  P  S  N  S  R  M  A  P  A  K  T  E  K  Q  P  V  K  S  V  A  Q  A  P  V  P  E  S  S  I  H  T  A  S  G  G  N  A  S  E  S  K  D  A  Q  Y  R   : A  E  G  H  S  I  Y  I  R  N  L  P  L  N  V  T  V  A  Q  L  E  V  E  F  K  R  F  G  P  I  M  Q  G  G  I  Q  V  R  S  N  R  :  Q  Q  G  F  C  F  G  F  V  E  F  E  D  L  N  S  M  N  S  A  I  Q  :  A  S  P  V  T  I  G  G  L  Q  A  E  L  E  I  K  R  T  T  S  R   : V  G  S  G  R  G  R  F  P  T  G  R  G  A  G  Y  R  N  E  N  F  R  G  R  G  N  F  S  G  A  G  R  G  Y  G  R  S  D  F  N  G  G  R  G  G  R  G  G  E  S  Y  Q  Q  G  R  G  R  G  G  R  R  G  G  L  S  Q  I  P  S  S  A  *  K  F  Y  V  A  N  F  D  G  V  S  F  F  S  I  E  V  L  C  C  K  F  *  P  S  F  V  L  P  L  A  P  T  G  *  L  C  S  L  V  *  Y  F  S  Y  Y   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E08.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="75515" stop="74513"/>
                    <exon start="73952" stop="73766"/>
                    <exon start="72841" stop="72544"/>
                    <exon start="72462" stop="72064"/>
                    <exon start="71799" stop="71678"/>
                    <exon start="71567" stop="71502"/>
                    <exon start="71170" stop="71107"/>
                    <exon start="70971" stop="70757"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1401</number_coding_nucleotides>
                  <number_encoded_amino_acids>467</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VSVSPYLSRGIRLLTHYIMAMETTAIPSAPAAQVIGNAFVEQYYQIQHHSPELVYRFCLDSSVLSRPNSNGVMTSVTTMKNINDMICSLGYKNYKAEIKTADAQQSYKDGVIVLVTGCLTGKDNTRKQFTQTFFLAPQDKGYFVLNDVLRYAEQVETDNSSEMVNAVKDVAPVPLTPDPEPVHVLQPSNHRQPSSHAEDIKIVEEVVHGSLENEKVVGDEREIMVGAESHINAEPATSVSREDAPKKSYASIVSSQTKKGPAKIYVPSNSRMAPAKTEKQPVKSVAQAPVPESSIHTASGGNASESKDAQYRAEGHSIYIRNLPLNVTVAQLEVEFKRFGPIMQGGIQVRSNRQQGFCFGFVEFEDLNSMNSAIQASPVTIGGLQAELEIKRTTSRVGSGRGRFPTGRGAGYRNENFRGRGNFSGAGRGYGRSDFNGGRGGRGGESYQQGRGRGGRRGGLSQIPSSA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="79963" PGL_stop="84502"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="79963" e_stop="80432"/>
            <exon e_start="84227" e_stop="84502"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.993" e_score="1.000"/>
          <exon-only e_score="0.960"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="79963" e_stop="80432" e_length="470"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.993">
            <gDNA_intron_boundary i_start="80433" i_stop="84226" i_length="3794"/>
          </intron>
          <exon e_serial="2" e_score="0.960">
            <gDNA_exon_boundary e_start="84227" e_stop="84502" e_length="276"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79963" stop="80432"/>
              <exon start="84227" stop="84502"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U597090" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79963" stop="80432"/>
              <exon start="84227" stop="84466"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U583510" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79992" stop="80099"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U597092" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CGATTTAGGTCCAATTATCCCTACCCAATTTGAAGACATAACATTAAACCGCAAAATCAAACAGATCTCATTGAGCAAATTTCTTCAATGGCTTCGTCAGGGAAATCGATGATCCAAACCCTAAAACGGTTCATGAAGAAGCCATGGGAGTTCACCGGACCTCAAACAAGCCCCGAGTATTTAGACTCTATACCCAAGGCAGCGGAGTACAGAATCTTCTGTCCTGCCACTACCCAATCTCAGGCCATCATCCCCACATCCGATCCTGAAACCGTCTTCGATATCAAGTATTATTCTCGTGACCAGAGGCGTAACCGTCCTCCAATCAAGCGCACTTTCCTCACCAAAGCTGATGTTGAGAAGATGAGGATGGAGTACAAATTTGATGTCAACGATTTTCCTAAGCCTTATTTGACTGCTAAGGTTGAAGAGGATGAAAATGCTATTGGTGGTGGCTACCAGAAATGAAG : GCTTTGTTCTTGTGGCGAAGACTCCACTTGCTGTCAATAATGGTAGCTGATGATGTTTTGCAGTGTCAGCCAAGTGTATTGCATATGTACTCCGTTTTTTAAAAATGTTGAGATATATATTCTTGGAGCAATTTCCTTTGGTTTTAGAGTGATAAGTTTCACCAGTCGAATAATTTTTTTTTTCATTTAGCTTATGCGGATTGTTCCATGTCTTGTGCTTGAAAGAGTGAAAGTTAGTCGAACGTCGCATCTGATTAGCTATAGTCTGATTTTGAT</gDNA_template>
            <first_frame> R  F  R  S  N  Y  P  Y  P  I  *  R  H  N  I  K  P  Q  N  Q  T  D  L  I  E  Q  I  S  S  M  A  S  S  G  K  S  M  I  Q  T  L  K  R  F  M  K  K  P  W  E  F  T  G  P  Q  T  S  P  E  Y  L  D  S  I  P  K  A  A  E  Y  R  I  F  C  P  A  T  T  Q  S  Q  A  I  I  P  T  S  D  P  E  T  V  F  D  I  K  Y  Y  S  R  D  Q  R  R  N  R  P  P  I  K  R  T  F  L  T  K  A  D  V  E  K  M  R  M  E  Y  K  F  D  V  N  D  F  P  K  P  Y  L  T  A  K  V  E  E  D  E  N  A  I  G  G  G  Y  Q  K  *  R :   L  C  S  C  G  E  D  S  T  C  C  Q  *  W  *  L  M  M  F  C  S  V  S  Q  V  Y  C  I  C  T  P  F  F  K  N  V  E  I  Y  I  L  G  A  I  S  F  G  F  R  V  I  S  F  T  S  R  I  I  F  F  F  I  *  L  M  R  I  V  P  C  L  V  L  E  R  V  K  V  S  R  T  S  H  L  I  S  Y  S  L  I  L   </first_frame>
            <second_frame>  D  L  G  P  I  I  P  T  Q  F  E  D  I  T  L  N  R  K  I  K  Q  I  S  L  S  K  F  L  Q  W  L  R  Q  G  N  R  *  S  K  P  *  N  G  S  *  R  S  H  G  S  S  P  D  L  K  Q  A  P  S  I  *  T  L  Y  P  R  Q  R  S  T  E  S  S  V  L  P  L  P  N  L  R  P  S  S  P  H  P  I  L  K  P  S  S  I  S  S  I  I  L  V  T  R  G  V  T  V  L  Q  S  S  A  L  S  S  P  K  L  M  L  R  R  *  G  W  S  T  N  L  M  S  T  I  F  L  S  L  I  *  L  L  R  L  K  R  M  K  M  L  L  V  V  A  T  R  N  E   : G  F  V  L  V  A  K  T  P  L  A  V  N  N  G  S  *  *  C  F  A  V  S  A  K  C  I  A  Y  V  L  R  F  L  K  M  L  R  Y  I  F  L  E  Q  F  P  L  V  L  E  *  *  V  S  P  V  E  *  F  F  F  S  F  S  L  C  G  L  F  H  V  L  C  L  K  E  *  K  L  V  E  R  R  I  *  L  A  I  V  *  F  *  </second_frame>
            <third_frame>   I  *  V  Q  L  S  L  P  N  L  K  T  *  H  *  T  A  K  S  N  R  S  H  *  A  N  F  F  N  G  F  V  R  E  I  D  D  P  N  P  K  T  V  H  E  E  A  M  G  V  H  R  T  S  N  K  P  R  V  F  R  L  Y  T  Q  G  S  G  V  Q  N  L  L  S  C  H  Y  P  I  S  G  H  H  P  H  I  R  S  *  N  R  L  R  Y  Q  V  L  F  S  *  P  E  A  *  P  S  S  N  Q  A  H  F  P  H  Q  S  *  C  *  E  D  E  D  G  V  Q  I  *  C  Q  R  F  S  *  A  L  F  D  C  *  G  *  R  G  *  K  C  Y  W  W  W  L  P  E  M  K  :  A  L  F  L  W  R  R  L  H  L  L  S  I  M  V  A  D  D  V  L  Q  C  Q  P  S  V  L  H  M  Y  S  V  F  *  K  C  *  D  I  Y  S  W  S  N  F  L  W  F  *  S  D  K  F  H  Q  S  N  N  F  F  F  H  L  A  Y  A  D  C  S  M  S  C  A  *  K  S  E  S  *  S  N  V  A  S  D  *  L  *  S  D  F  D </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E08.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="79996" stop="80430"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>432</number_coding_nucleotides>
                  <number_encoded_amino_acids>144</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RHNIKPQNQTDLIEQISSMASSGKSMIQTLKRFMKKPWEFTGPQTSPEYLDSIPKAAEYRIFCPATTQSQAIIPTSDPETVFDIKYYSRDQRRNRPPIKRTFLTKADVEKMRMEYKFDVNDFPKPYLTAKVEEDENAIGGGYQK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="85593" PGL_stop="86334"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="85593" e_stop="86334"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.992">
            <gDNA_exon_boundary e_start="85593" e_stop="86334" e_length="742"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85593" stop="86334"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U591146" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85607" stop="86162"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U593308" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCTAGAGTACGCCATCGGAATGATCTCCGATCAAAACCCTAAACCCCCGTATCAGTTATGCCGCCGATCTAGCTGCTTCTTCCATACGTGAAAAAGAGTAACTCAGAGAACTTGATGCAGTCAGGTTTTCTTAAATTTCTCGCATGTATTCTTTTATAGAAAAATCAAGAACTCTTAAGTTACATTCATATAAAAATAGAAACTGTAGTTTTCTTGAATATATTGGCATTGCAAATATCAAGGAATTTCAAGAAATTAGGTTGTTATTCTCGCAGTGTATGTTAAGTATGTTAAGGATGTTCAAGAATTGAATGGAATGTTGTGGAGTTGTTCTTGAACTCAAAAACAAAAATTAAGTAGTTTAATTATAGGAGTTTGTGATTTGTAGTAATTTGAATGAAGACACTCAATTGGACAGACTTTCAGAAAGGTTTGTGTAATGCAAGAGAATAGAGAATATATGGTTCATCTTTTCTGATTTTGTTAAAACAAAAATTAAGTAGTTTAATTATACGAGTTTGTGATTTGTAGTAATTTGAATGAAGACACTCAATTGGACAGACTTTCATGAAGGTTTGTGTAATGTAAGAGAATAGAGAATATATGGTTCATCTTTTCTGATTTTGTTAAAACAAAAATTAAGTAGTTTAATTATACGAGTGTGTGATTTGTAGTAATTTGAATGAAGACACTCAATTGGACAGACTTTCAGAAAGGTTTGTGTAATGCAAGAGAATAGAGA</gDNA_template>
            <first_frame> S  R  V  R  H  R  N  D  L  R  S  K  P  *  T  P  V  S  V  M  P  P  I  *  L  L  L  P  Y  V  K  K  S  N  S  E  N  L  M  Q  S  G  F  L  K  F  L  A  C  I  L  L  *  K  N  Q  E  L  L  S  Y  I  H  I  K  I  E  T  V  V  F  L  N  I  L  A  L  Q  I  S  R  N  F  K  K  L  G  C  Y  S  R  S  V  C  *  V  C  *  G  C  S  R  I  E  W  N  V  V  E  L  F  L  N  S  K  T  K  I  K  *  F  N  Y  R  S  L  *  F  V  V  I  *  M  K  T  L  N  W  T  D  F  Q  K  G  L  C  N  A  R  E  *  R  I  Y  G  S  S  F  L  I  L  L  K  Q  K  L  S  S  L  I  I  R  V  C  D  L  *  *  F  E  *  R  H  S  I  G  Q  T  F  M  K  V  C  V  M  *  E  N  R  E  Y  M  V  H  L  F  *  F  C  *  N  K  N  *  V  V  *  L  Y  E  C  V  I  C  S  N  L  N  E  D  T  Q  L  D  R  L  S  E  R  F  V  *  C  K  R  I  E  </first_frame>
            <second_frame>  L  E  Y  A  I  G  M  I  S  D  Q  N  P  K  P  P  Y  Q  L  C  R  R  S  S  C  F  F  H  T  *  K  R  V  T  Q  R  T  *  C  S  Q  V  F  L  N  F  S  H  V  F  F  Y  R  K  I  K  N  S  *  V  T  F  I  *  K  *  K  L  *  F  S  *  I  Y  W  H  C  K  Y  Q  G  I  S  R  N  *  V  V  I  L  A  V  Y  V  K  Y  V  K  D  V  Q  E  L  N  G  M  L  W  S  C  S  *  T  Q  K  Q  K  L  S  S  L  I  I  G  V  C  D  L  *  *  F  E  *  R  H  S  I  G  Q  T  F  R  K  V  C  V  M  Q  E  N  R  E  Y  M  V  H  L  F  *  F  C  *  N  K  N  *  V  V  *  L  Y  E  F  V  I  C  S  N  L  N  E  D  T  Q  L  D  R  L  S  *  R  F  V  *  C  K  R  I  E  N  I  W  F  I  F  S  D  F  V  K  T  K  I  K  *  F  N  Y  T  S  V  *  F  V  V  I  *  M  K  T  L  N  W  T  D  F  Q  K  G  L  C  N  A  R  E  *  R </second_frame>
            <third_frame>   *  S  T  P  S  E  *  S  P  I  K  T  L  N  P  R  I  S  Y  A  A  D  L  A  A  S  S  I  R  E  K  E  *  L  R  E  L  D  A  V  R  F  S  *  I  S  R  M  Y  S  F  I  E  K  S  R  T  L  K  L  H  S  Y  K  N  R  N  C  S  F  L  E  Y  I  G  I  A  N  I  K  E  F  Q  E  I  R  L  L  F  S  Q  C  M  L  S  M  L  R  M  F  K  N  *  M  E  C  C  G  V  V  L  E  L  K  N  K  N  *  V  V  *  L  *  E  F  V  I  C  S  N  L  N  E  D  T  Q  L  D  R  L  S  E  R  F  V  *  C  K  R  I  E  N  I  W  F  I  F  S  D  F  V  K  T  K  I  K  *  F  N  Y  T  S  L  *  F  V  V  I  *  M  K  T  L  N  W  T  D  F  H  E  G  L  C  N  V  R  E  *  R  I  Y  G  S  S  F  L  I  L  L  K  Q  K  L  S  S  L  I  I  R  V  C  D  L  *  *  F  E  *  R  H  S  I  G  Q  T  F  R  K  V  C  V  M  Q  E  N  R   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0236E08.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="+" PGL_start="87124" PGL_stop="88272"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="87124" e_stop="87545"/>
            <exon e_start="87638" e_stop="87692"/>
            <exon e_start="87845" e_stop="87946"/>
            <exon e_start="88021" e_stop="88272"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.000" e_score="0.846"/>
          <exon-intron don_prob="0.926" acc_prob="0.936" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.811" e_score="1.000"/>
          <exon-only e_score="0.956"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.846">
            <gDNA_exon_boundary e_start="87124" e_stop="87545" e_length="422"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.000">
            <gDNA_intron_boundary i_start="87546" i_stop="87637" i_length="92"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="87638" e_stop="87692" e_length="55"/>
          </exon>
          <intron i_serial="2" don_prob="0.926" acc_prob="0.936">
            <gDNA_intron_boundary i_start="87693" i_stop="87844" i_length="152"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="87845" e_stop="87946" e_length="102"/>
          </exon>
          <intron i_serial="3" don_prob="0.994" acc_prob="0.811">
            <gDNA_intron_boundary i_start="87947" i_stop="88020" i_length="74"/>
          </intron>
          <exon e_serial="4" e_score="0.956">
            <gDNA_exon_boundary e_start="88021" e_stop="88272" e_length="252"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="87124" stop="87545"/>
              <exon start="87638" stop="87692"/>
              <exon start="87845" stop="87946"/>
              <exon start="88021" stop="88272"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U580873" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTAATGAATTCTTTATGTTCTTTTGTTAACTTCTTTTGATGACGAGGGCATATGCTTAATATGAAAATTAATACTATTGTTTCTTTTCTTTAGGTTGATACTCCATTCTAGACTAATCTTCTTATGTTTGTTTGTTTATAAGCTGTGTAATCGTACTTTGAACTTGAACCAACTTTCCACCAGATATCTGCTGCTATGTGACTGTTTCTACATCTTCTGTTTATGCTTCCTTTTTGTCCGGTCATTTTATCATGGTTTCGTATGCTCGCTTTACACCAGCTACACCAAAATACAACCATTAAGATGAATTGCATACTTCCCCAGCAAGTTTTGGCTTTAAAGGAGAGGCTCAGTGGCGTTCCTTTGTTGGAAATCGTCACTAAAACTCACCGGAAGCCAAATGGATATCGCAGGTTTTTCAG : GGCAAGTGTTTGTACCTTGGAATTGAAGATCGTAGACAAAATGTTGGTGCAACAG : TCTTGGAAGTCCAAAGAGGATCTTGCATTCTCTGCAAGAGTCTTGTCTAAGAACCACCCTTGTGCATCCGAGTGTCTCCCTCAAAATTGTTGATATTGAAAG : TGAGGATGTCTTAGTTTGCACGTGTGCTTCACCTTTTCCGTTGCCGCTATTGTATAGTGGGTTTGACATTCTTCTTAGTTCCCTTGACAAATTGAATGCAAGTGATGGTTCATTCAAGCTCTCAAGATACGTCTCAGGTCCTGATGTTTTCACAGTGTAGGTATACAGTCCCCAATTGATGGATAAAGAGATGCAATAAGTCTTCTTTTCTACACCCTACTCAATCTTATGTACTCTTGTGACGTCTGACGG</gDNA_template>
            <first_frame> L  M  N  S  L  C  S  F  V  N  F  F  *  *  R  G  H  M  L  N  M  K  I  N  T  I  V  S  F  L  *  V  D  T  P  F  *  T  N  L  L  M  F  V  C  L  *  A  V  *  S  Y  F  E  L  E  P  T  F  H  Q  I  S  A  A  M  *  L  F  L  H  L  L  F  M  L  P  F  C  P  V  I  L  S  W  F  R  M  L  A  L  H  Q  L  H  Q  N  T  T  I  K  M  N  C  I  L  P  Q  Q  V  L  A  L  K  E  R  L  S  G  V  P  L  L  E  I  V  T  K  T  H  R  K  P  N  G  Y  R  R  F  F  R :   A  S  V  C  T  L  E  L  K  I  V  D  K  M  L  V  Q  Q  :  S  W  K  S  K  E  D  L  A  F  S  A  R  V  L  S  K  N  H  P  C  A  S  E  C  L  P  Q  N  C  *  Y  *  K  :  *  G  C  L  S  L  H  V  C  F  T  F  S  V  A  A  I  V  *  W  V  *  H  S  S  *  F  P  *  Q  I  E  C  K  *  W  F  I  Q  A  L  K  I  R  L  R  S  *  C  F  H  S  V  G  I  Q  S  P  I  D  G  *  R  D  A  I  S  L  L  F  Y  T  L  L  N  L  M  Y  S  C  D  V  *  R </first_frame>
            <second_frame>  *  *  I  L  Y  V  L  L  L  T  S  F  D  D  E  G  I  C  L  I  *  K  L  I  L  L  F  L  F  F  R  L  I  L  H  S  R  L  I  F  L  C  L  F  V  Y  K  L  C  N  R  T  L  N  L  N  Q  L  S  T  R  Y  L  L  L  C  D  C  F  Y  I  F  C  L  C  F  L  F  V  R  S  F  Y  H  G  F  V  C  S  L  Y  T  S  Y  T  K  I  Q  P  L  R  *  I  A  Y  F  P  S  K  F  W  L  *  R  R  G  S  V  A  F  L  C  W  K  S  S  L  K  L  T  G  S  Q  M  D  I  A  G  F  S   : G  Q  V  F  V  P  W  N  *  R  S  *  T  K  C  W  C  N  S :   L  G  S  P  K  R  I  L  H  S  L  Q  E  S  C  L  R  T  T  L  V  H  P  S  V  S  L  K  I  V  D  I  E  S :   E  D  V  L  V  C  T  C  A  S  P  F  P  L  P  L  L  Y  S  G  F  D  I  L  L  S  S  L  D  K  L  N  A  S  D  G  S  F  K  L  S  R  Y  V  S  G  P  D  V  F  T  V  *  V  Y  S  P  Q  L  M  D  K  E  M  Q  *  V  F  F  S  T  P  Y  S  I  L  C  T  L  V  T  S  D   </second_frame>
            <third_frame>   N  E  F  F  M  F  F  C  *  L  L  L  M  T  R  A  Y  A  *  Y  E  N  *  Y  Y  C  F  F  S  L  G  *  Y  S  I  L  D  *  S  S  Y  V  C  L  F  I  S  C  V  I  V  L  *  T  *  T  N  F  P  P  D  I  C  C  Y  V  T  V  S  T  S  S  V  Y  A  S  F  L  S  G  H  F  I  M  V  S  Y  A  R  F  T  P  A  T  P  K  Y  N  H  *  D  E  L  H  T  S  P  A  S  F  G  F  K  G  E  A  Q  W  R  S  F  V  G  N  R  H  *  N  S  P  E  A  K  W  I  S  Q  V  F  Q  :  G  K  C  L  Y  L  G  I  E  D  R  R  Q  N  V  G  A  T   : V  L  E  V  Q  R  G  S  C  I  L  C  K  S  L  V  *  E  P  P  L  C  I  R  V  S  P  S  K  L  L  I  L  K   : V  R  M  S  *  F  A  R  V  L  H  L  F  R  C  R  Y  C  I  V  G  L  T  F  F  L  V  P  L  T  N  *  M  Q  V  M  V  H  S  S  S  Q  D  T  S  Q  V  L  M  F  S  Q  C  R  Y  T  V  P  N  *  W  I  K  R  C  N  K  S  S  F  L  H  P  T  Q  S  Y  V  L  L  *  R  L  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E08.1" strand="+"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="87325" stop="87545"/>
                    <exon start="87638" stop="87692"/>
                    <exon start="87845" stop="87937"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>366</number_coding_nucleotides>
                  <number_encoded_amino_acids>122</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LFLHLLFMLPFCPVILSWFRMLALHQLHQNTTIKMNCILPQQVLALKERLSGVPLLEIVTKTHRKPNGYRRFFRASVCTLELKIVDKMLVQQSWKSKEDLAFSARVLSKNHPCASECLPQNC*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E08.1" strand="+"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="87673" stop="87692"/>
                    <exon start="87845" stop="87946"/>
                    <exon start="88021" stop="88180"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>279</number_coding_nucleotides>
                  <number_encoded_amino_acids>93</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TKCWCNSLGSPKRILHSLQESCLRTTLVHPSVSLKIVDIESEDVLVCTCASPFPLPLLYSGFDILLSSLDKLNASDGSFKLSRYVSGPDVFTV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="+" PGL_start="88625" PGL_stop="95404"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="88625" e_stop="88722"/>
            <exon e_start="88833" e_stop="88881"/>
            <exon e_start="89028" e_stop="89108"/>
            <exon e_start="89661" e_stop="89711"/>
            <exon e_start="90827" e_stop="91019"/>
            <exon e_start="91108" e_stop="91235"/>
            <exon e_start="91316" e_stop="91409"/>
            <exon e_start="92047" e_stop="92799"/>
            <exon e_start="92902" e_stop="93057"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.972" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.980" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.898" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.446" e_score="1.000"/>
          <exon-intron don_prob="0.949" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.885" acc_prob="0.964" e_score="1.000"/>
          <exon-intron don_prob="0.966" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.514" acc_prob="0.637" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="88625" e_stop="88722" e_length="98"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.972">
            <gDNA_intron_boundary i_start="88723" i_stop="88832" i_length="110"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="88833" e_stop="88881" e_length="49"/>
          </exon>
          <intron i_serial="2" don_prob="0.992" acc_prob="0.980">
            <gDNA_intron_boundary i_start="88882" i_stop="89027" i_length="146"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="89028" e_stop="89108" e_length="81"/>
          </exon>
          <intron i_serial="3" don_prob="0.996" acc_prob="0.898">
            <gDNA_intron_boundary i_start="89109" i_stop="89660" i_length="552"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="89661" e_stop="89711" e_length="51"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="0.446">
            <gDNA_intron_boundary i_start="89712" i_stop="90826" i_length="1115"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="90827" e_stop="91019" e_length="193"/>
          </exon>
          <intron i_serial="5" don_prob="0.949" acc_prob="0.983">
            <gDNA_intron_boundary i_start="91020" i_stop="91107" i_length="88"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="91108" e_stop="91235" e_length="128"/>
          </exon>
          <intron i_serial="6" don_prob="0.885" acc_prob="0.964">
            <gDNA_intron_boundary i_start="91236" i_stop="91315" i_length="80"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="91316" e_stop="91409" e_length="94"/>
          </exon>
          <intron i_serial="7" don_prob="0.966" acc_prob="0.983">
            <gDNA_intron_boundary i_start="91410" i_stop="92046" i_length="637"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="92047" e_stop="92799" e_length="753"/>
          </exon>
          <intron i_serial="8" don_prob="0.514" acc_prob="0.637">
            <gDNA_intron_boundary i_start="92800" i_stop="92901" i_length="102"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="92902" e_stop="93057" e_length="156"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88625" stop="88722"/>
              <exon start="88833" stop="88881"/>
              <exon start="89028" stop="89108"/>
              <exon start="89661" stop="89711"/>
              <exon start="90827" stop="91019"/>
              <exon start="91108" stop="91235"/>
              <exon start="91316" stop="91409"/>
              <exon start="92047" stop="92799"/>
              <exon start="92902" stop="93057"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U578184" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGTTCACAGGGTTCAAAATCGCATATGGGTGTACCATGCGTCTTGGATCAAGAAGAACGTATTTTAGAGTCAAAGATTCTAAATCTGTAAAACTATCA : ATGTCGCAACCGGAGCTTTGTTGATGAAAGGCACCGTCATAGATATGAG : GTGAATCTTGATATGGTGCAGAAATTTGAAGATGCTTGTCTTTCTTTCCCTGGCAAAGATGAAAGTGATCGGTACATGGAG : GTAATGTTGCAATAGGAATTGGGACCTGCTATGTTAAGGTGGATGACAATG : GGTGGATGGGGACTCACATAAATGGATTGATGCTTGAAATCGAGGTAAAACAGATAAGTCTTACAAGGAAGAAGAAGTCATACAACTCTTCCATTTTACCATGGCAAGAAGTTCTTTGCCACGAGTGAGTCTTCAAGAAAGGCAGAAGGAAATAATAATATTAAGACAGTTCATGATGTGTTACTCATGCCAG : AAACTAGAACTGTAAGGAGACTGCATCATTCTACAGAAGCTATCTGGCTGGAGCTTCCACGACAGTCATGAGTCATCCCATCAATGTGATTAATCTTCAACCCATGACAGTGTATTTTCTGATGGAAG : GCCAAGTGTGAAAATGGAACCTGTCAACATCTGAAATAACAATTACAAGCTCAAGGGGAGTGCTCAAGTACGCACAATGGGGAGTCAAAAGAAG : ATATTTTGCTATGAACTGGATTAGGAAGCTATCAATGGCATGTTATTTATTTGTTAGAAATGCTGCTCATCCCAGTTCAACATTTCTACTTTGTGTTCCATATGTAGGTTAAGAGAGGAGTAGTTTGAATTATTATCTCAAAAATGAAAATAAAAAGAAGTTTGAATGTTGGTATATACCGTCCTTAAGCTGACTTTTCTAAATGATGCTTCACAATCAAGCTAGAAAAAGACTAAGCAAGTGATGTCCTAATGAAATGGTGCACTGAAGAGTGCACTGGCAGGAGTGAGATTCGATCTTCACAGATTATTCGGTGGGGATGTGCTTCTGAAAAGCATGATCCTGAGTCCAGATTCCTCTGTCAAATCATACGTTCAAGTCTGTCAATTGATTTCTCTCTTGCTCATTGACAGTTGGTGTGAACTGGAAATCCAGAAACGCTGCGCACACCCATTCATCTAATGTTTTTCCTAAGGATGGTGATTTCCTGGATAATAAATTCAGTGCTTCAGGTAGCTAGCTCCAGTTGTAGATCAGACTTCCTGTTAATTTCCAGACGGGAGGAATCTTTAACAATTGTAGCTGGCAGATCAACAGAGAATGTCTCATTTAAGGAATCTCTTGTACTTGATAACAGTTCAAATGTAAAGCATGAGAGAAGGAAACCATTTATGCAGAGCGGTTCTTTGCGCAGAAGCCTCACACATGATGAATCATCTTTTGATAGTTATGAAGATATTAAGTTTGAAAAAA : GTAAGGAAATATGATTTGAGAAGTTTTGCTGGGGCAAAACTAAGAGCAAGGCATTGCAGAGTCAAAATAGATTCAGAAAAGTCTGCATTAACCAGGACATTCTAGAAGAATACGATCATCGGATGGACTTCTTTGAACAGACTGCTGAAATGTATG</gDNA_template>
            <first_frame> S  S  Q  G  S  K  S  H  M  G  V  P  C  V  L  D  Q  E  E  R  I  L  E  S  K  I  L  N  L  *  N  Y  Q :   C  R  N  R  S  F  V  D  E  R  H  R  H  R  Y  E  :  V  N  L  D  M  V  Q  K  F  E  D  A  C  L  S  F  P  G  K  D  E  S  D  R  Y  M  E  :  V  M  L  Q  *  E  L  G  P  A  M  L  R  W  M  T  M  :  G  G  W  G  L  T  *  M  D  *  C  L  K  S  R  *  N  R  *  V  L  Q  G  R  R  S  H  T  T  L  P  F  Y  H  G  K  K  F  F  A  T  S  E  S  S  R  K  A  E  G  N  N  N  I  K  T  V  H  D  V  L  L  M  P   : E  T  R  T  V  R  R  L  H  H  S  T  E  A  I  W  L  E  L  P  R  Q  S  *  V  I  P  S  M  *  L  I  F  N  P  *  Q  C  I  F  *  W  K  :  A  K  C  E  N  G  T  C  Q  H  L  K  *  Q  L  Q  A  Q  G  E  C  S  S  T  H  N  G  E  S  K  E   : D  I  L  L  *  T  G  L  G  S  Y  Q  W  H  V  I  Y  L  L  E  M  L  L  I  P  V  Q  H  F  Y  F  V  F  H  M  *  V  K  R  G  V  V  *  I  I  I  S  K  M  K  I  K  R  S  L  N  V  G  I  Y  R  P  *  A  D  F  S  K  *  C  F  T  I  K  L  E  K  D  *  A  S  D  V  L  M  K  W  C  T  E  E  C  T  G  R  S  E  I  R  S  S  Q  I  I  R  W  G  C  A  S  E  K  H  D  P  E  S  R  F  L  C  Q  I  I  R  S  S  L  S  I  D  F  S  L  A  H  *  Q  L  V  *  T  G  N  P  E  T  L  R  T  P  I  H  L  M  F  F  L  R  M  V  I  S  W  I  I  N  S  V  L  Q  V  A  S  S  S  C  R  S  D  F  L  L  I  S  R  R  E  E  S  L  T  I  V  A  G  R  S  T  E  N  V  S  F  K  E  S  L  V  L  D  N  S  S  N  V  K  H  E  R  R  K  P  F  M  Q  S  G  S  L  R  R  S  L  T  H  D  E  S  S  F  D  S  Y  E  D  I  K  F  E  K   : S  K  E  I  *  F  E  K  F  C  W  G  K  T  K  S  K  A  L  Q  S  Q  N  R  F  R  K  V  C  I  N  Q  D  I  L  E  E  Y  D  H  R  M  D  F  F  E  Q  T  A  E  M  Y  </first_frame>
            <second_frame>  V  H  R  V  Q  N  R  I  W  V  Y  H  A  S  W  I  K  K  N  V  F  *  S  Q  R  F  *  I  C  K  T  I   : N  V  A  T  G  A  L  L  M  K  G  T  V  I  D  M  R :   *  I  L  I  W  C  R  N  L  K  M  L  V  F  L  S  L  A  K  M  K  V  I  G  T  W  R :   *  C  C  N  R  N  W  D  L  L  C  *  G  G  *  Q  W :   V  D  G  D  S  H  K  W  I  D  A  *  N  R  G  K  T  D  K  S  Y  K  E  E  E  V  I  Q  L  F  H  F  T  M  A  R  S  S  L  P  R  V  S  L  Q  E  R  Q  K  E  I  I  I  L  R  Q  F  M  M  C  Y  S  C  Q  :  K  L  E  L  *  G  D  C  I  I  L  Q  K  L  S  G  W  S  F  H  D  S  H  E  S  S  H  Q  C  D  *  S  S  T  H  D  S  V  F  S  D  G  R :   P  S  V  K  M  E  P  V  N  I  *  N  N  N  Y  K  L  K  G  S  A  Q  V  R  T  M  G  S  Q  K  K  :  I  F  C  Y  E  L  D  *  E  A  I  N  G  M  L  F  I  C  *  K  C  C  S  S  Q  F  N  I  S  T  L  C  S  I  C  R  L  R  E  E  *  F  E  L  L  S  Q  K  *  K  *  K  E  V  *  M  L  V  Y  T  V  L  K  L  T  F  L  N  D  A  S  Q  S  S  *  K  K  T  K  Q  V  M  S  *  *  N  G  A  L  K  S  A  L  A  G  V  R  F  D  L  H  R  L  F  G  G  D  V  L  L  K  S  M  I  L  S  P  D  S  S  V  K  S  Y  V  Q  V  C  Q  L  I  S  L  L  L  I  D  S  W  C  E  L  E  I  Q  K  R  C  A  H  P  F  I  *  C  F  S  *  G  W  *  F  P  G  *  *  I  Q  C  F  R  *  L  A  P  V  V  D  Q  T  S  C  *  F  P  D  G  R  N  L  *  Q  L  *  L  A  D  Q  Q  R  M  S  H  L  R  N  L  L  Y  L  I  T  V  Q  M  *  S  M  R  E  G  N  H  L  C  R  A  V  L  C  A  E  A  S  H  M  M  N  H  L  L  I  V  M  K  I  L  S  L  K  K  :  V  R  K  Y  D  L  R  S  F  A  G  A  K  L  R  A  R  H  C  R  V  K  I  D  S  E  K  S  A  L  T  R  T  F  *  K  N  T  I  I  G  W  T  S  L  N  R  L  L  K  C  M </second_frame>
            <third_frame>   F  T  G  F  K  I  A  Y  G  C  T  M  R  L  G  S  R  R  T  Y  F  R  V  K  D  S  K  S  V  K  L  S  :  M  S  Q  P  E  L  C  *  *  K  A  P  S  *  I  *   : G  E  S  *  Y  G  A  E  I  *  R  C  L  S  F  F  P  W  Q  R  *  K  *  S  V  H  G   : G  N  V  A  I  G  I  G  T  C  Y  V  K  V  D  D  N   : G  W  M  G  T  H  I  N  G  L  M  L  E  I  E  V  K  Q  I  S  L  T  R  K  K  K  S  Y  N  S  S  I  L  P  W  Q  E  V  L  C  H  E  *  V  F  K  K  G  R  R  K  *  *  Y  *  D  S  S  *  C  V  T  H  A  R :   N  *  N  C  K  E  T  A  S  F  Y  R  S  Y  L  A  G  A  S  T  T  V  M  S  H  P  I  N  V  I  N  L  Q  P  M  T  V  Y  F  L  M  E   : G  Q  V  *  K  W  N  L  S  T  S  E  I  T  I  T  S  S  R  G  V  L  K  Y  A  Q  W  G  V  K  R  R :   Y  F  A  M  N  W  I  R  K  L  S  M  A  C  Y  L  F  V  R  N  A  A  H  P  S  S  T  F  L  L  C  V  P  Y  V  G  *  E  R  S  S  L  N  Y  Y  L  K  N  E  N  K  K  K  F  E  C  W  Y  I  P  S  L  S  *  L  F  *  M  M  L  H  N  Q  A  R  K  R  L  S  K  *  C  P  N  E  M  V  H  *  R  V  H  W  Q  E  *  D  S  I  F  T  D  Y  S  V  G  M  C  F  *  K  A  *  S  *  V  Q  I  P  L  S  N  H  T  F  K  S  V  N  *  F  L  S  C  S  L  T  V  G  V  N  W  K  S  R  N  A  A  H  T  H  S  S  N  V  F  P  K  D  G  D  F  L  D  N  K  F  S  A  S  G  S  *  L  Q  L  *  I  R  L  P  V  N  F  Q  T  G  G  I  F  N  N  C  S  W  Q  I  N  R  E  C  L  I  *  G  I  S  C  T  *  *  Q  F  K  C  K  A  *  E  K  E  T  I  Y  A  E  R  F  F  A  Q  K  P  H  T  *  *  I  I  F  *  *  L  *  R  Y  *  V  *  K  K :   *  G  N  M  I  *  E  V  L  L  G  Q  N  *  E  Q  G  I  A  E  S  K  *  I  Q  K  S  L  H  *  P  G  H  S  R  R  I  R  S  S  D  G  L  L  *  T  D  C  *  N  V   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E08.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="92469" stop="92799"/>
                    <exon start="92902" stop="92915"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>342</number_coding_nucleotides>
                  <number_encoded_amino_acids>114</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TGNPETLRTPIHLMFFLRMVISWIINSVLQVASSSCRSDFLLISRREESLTIVAGRSTENVSFKESLVLDNSSNVKHERRKPFMQSGSLRRSLTHDESSFDSYEDIKFEKSKEI*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E08.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="90884" stop="91019"/>
                    <exon start="91108" stop="91178"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>204</number_coding_nucleotides>
                  <number_encoded_amino_acids>68</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VLQGRRSHTTLPFYHGKKFFATSESSRKAEGNNNIKTVHDVLLMPETRTVRRLHHSTEAIWLELPRQS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E08.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="91327" stop="91409"/>
                    <exon start="92047" stop="92158"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>192</number_coding_nucleotides>
                  <number_encoded_amino_acids>64</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KWNLSTSEITITSSRGVLKYAQWGVKRRYFAMNWIRKLSMACYLFVRNAAHPSSTFLLCVPYVG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="90813" e_stop="91019"/>
            <exon e_start="91108" e_stop="91235"/>
            <exon e_start="91316" e_stop="91409"/>
            <exon e_start="93473" e_stop="93677"/>
            <exon e_start="93767" e_stop="93882"/>
            <exon e_start="93986" e_stop="94081"/>
            <exon e_start="95209" e_stop="95404"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.949" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.885" acc_prob="0.964" e_score="1.000"/>
          <exon-intron don_prob="0.966" acc_prob="0.431" e_score="1.000"/>
          <exon-intron don_prob="0.886" acc_prob="0.900" e_score="1.000"/>
          <exon-intron don_prob="0.863" acc_prob="0.945" e_score="1.000"/>
          <exon-intron don_prob="0.954" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.969"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="90813" e_stop="91019" e_length="207"/>
          </exon>
          <intron i_serial="1" don_prob="0.949" acc_prob="0.983">
            <gDNA_intron_boundary i_start="91020" i_stop="91107" i_length="88"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="91108" e_stop="91235" e_length="128"/>
          </exon>
          <intron i_serial="2" don_prob="0.885" acc_prob="0.964">
            <gDNA_intron_boundary i_start="91236" i_stop="91315" i_length="80"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="91316" e_stop="91409" e_length="94"/>
          </exon>
          <intron i_serial="3" don_prob="0.966" acc_prob="0.431">
            <gDNA_intron_boundary i_start="91410" i_stop="93472" i_length="2063"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="93473" e_stop="93677" e_length="205"/>
          </exon>
          <intron i_serial="4" don_prob="0.886" acc_prob="0.900">
            <gDNA_intron_boundary i_start="93678" i_stop="93766" i_length="89"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="93767" e_stop="93882" e_length="116"/>
          </exon>
          <intron i_serial="5" don_prob="0.863" acc_prob="0.945">
            <gDNA_intron_boundary i_start="93883" i_stop="93985" i_length="103"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="93986" e_stop="94081" e_length="96"/>
          </exon>
          <intron i_serial="6" don_prob="0.954" acc_prob="1.000">
            <gDNA_intron_boundary i_start="94082" i_stop="95208" i_length="1127"/>
          </intron>
          <exon e_serial="7" e_score="0.969">
            <gDNA_exon_boundary e_start="95209" e_stop="95404" e_length="196"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90813" stop="91019"/>
              <exon start="91108" stop="91235"/>
              <exon start="91316" stop="91409"/>
              <exon start="93473" stop="93677"/>
              <exon start="93767" stop="93882"/>
              <exon start="93986" stop="94081"/>
              <exon start="95209" stop="95404"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U580291" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTGCACTCCTCTAGGGTGGATGGGGACTCACATAAATGGATTGATGCTTGAAATCGAGGTAAAACAGATAAGTCTTACAAGGAAGAAGAAGTCATACAACTCTTCCATTTTACCATGGCAAGAAGTTCTTTGCCACGAGTGAGTCTTCAAGAAAGGCAGAAGGAAATAATAATATTAAGACAGTTCATGATGTGTTACTCATGCCAG : AAACTAGAACTGTAAGGAGACTGCATCATTCTACAGAAGCTATCTGGCTGGAGCTTCCACGACAGTCATGAGTCATCCCATCAATGTGATTAATCTTCAACCCATGACAGTGTATTTTCTGATGGAAG : GCCAAGTGTGAAAATGGAACCTGTCAACATCTGAAATAACAATTACAAGCTCAAGGGGAGTGCTCAAGTACGCACAATGGGGAGTCAAAAGAAG : GGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAGTTTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACATATATTGTGACTGTTCGTGATGTGCCACTTATGCCAG : AAACTACAGCGATAAGGAGAGTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCACCCAAGTTGTGGTGACTGTGTATTCTCTGATGAAAG : GCCAAGTATGAAAATGAAACTAGCTAACATCTGGAATAACAAATTACAAGCTCAAAGGGGAGTGTACAAGTACACTCAATGGGGATTCAAAAGAAG : GTTCTGTGTAGCTGGGGTGTTGGGGCATCTCCAATCCAAACACCTAATTTTACACCAAATTTGGTGTTAACCAAATTTACTGTAATCAACTCCAACCTACTGCATCGAAAAATAATTTATTTTCTCTCATTATTATTATTATTATTTTTTATTTCATTTATATTTTTTTATTTCATAAAACATTTTCTTTCTATGG</gDNA_template>
            <first_frame> V  H  S  S  R  V  D  G  D  S  H  K  W  I  D  A  *  N  R  G  K  T  D  K  S  Y  K  E  E  E  V  I  Q  L  F  H  F  T  M  A  R  S  S  L  P  R  V  S  L  Q  E  R  Q  K  E  I  I  I  L  R  Q  F  M  M  C  Y  S  C  Q  :  K  L  E  L  *  G  D  C  I  I  L  Q  K  L  S  G  W  S  F  H  D  S  H  E  S  S  H  Q  C  D  *  S  S  T  H  D  S  V  F  S  D  G  R :   P  S  V  K  M  E  P  V  N  I  *  N  N  N  Y  K  L  K  G  S  A  Q  V  R  T  M  G  S  Q  K  K  :  G  G  W  N  S  G  K  W  I  D  T  G  N  Q  G  K  T  D  E  L  I  G  *  R  G  S  E  E  V  I  Q  L  I  H  F  T  K  A  W  R  S  F  L  P  Q  M  S  L  Q  E  K  Q  Q  *  I  T  Y  I  V  T  V  R  D  V  P  L  M  P   : E  T  T  A  I  R  R  V  Q  H  S  A  E  A  I  C  S  E  L  P  H  L  C  N  Q  S  S  P  K  L  W  *  L  C  I  L  *  *  K  :  A  K  Y  E  N  E  T  S  *  H  L  E  *  Q  I  T  S  S  K  G  S  V  Q  V  H  S  M  G  I  Q  K  K  :  V  L  C  S  W  G  V  G  A  S  P  I  Q  T  P  N  F  T  P  N  L  V  L  T  K  F  T  V  I  N  S  N  L  L  H  R  K  I  I  Y  F  L  S  L  L  L  L  L  F  F  I  S  F  I  F  F  Y  F  I  K  H  F  L  S  M  </first_frame>
            <second_frame>  C  T  P  L  G  W  M  G  T  H  I  N  G  L  M  L  E  I  E  V  K  Q  I  S  L  T  R  K  K  K  S  Y  N  S  S  I  L  P  W  Q  E  V  L  C  H  E  *  V  F  K  K  G  R  R  K  *  *  Y  *  D  S  S  *  C  V  T  H  A  R :   N  *  N  C  K  E  T  A  S  F  Y  R  S  Y  L  A  G  A  S  T  T  V  M  S  H  P  I  N  V  I  N  L  Q  P  M  T  V  Y  F  L  M  E   : G  Q  V  *  K  W  N  L  S  T  S  E  I  T  I  T  S  S  R  G  V  L  K  Y  A  Q  W  G  V  K  R  R :   V  D  G  T  R  V  N  G  L  I  R  E  I  K  V  K  Q  M  S  L  *  D  E  E  D  Q  K  K  S  F  S  S  S  I  L  P  K  H  G  E  V  F  C  H  K  *  V  F  K  K  S  S  S  K  *  H  I  L  *  L  F  V  M  C  H  L  C  Q  :  K  L  Q  R  *  G  E  C  S  I  L  Q  K  L  S  A  R  S  F  H  I  Y  V  I  N  L  H  P  S  C  G  D  C  V  F  S  D  E  R :   P  S  M  K  M  K  L  A  N  I  W  N  N  K  L  Q  A  Q  R  G  V  Y  K  Y  T  Q  W  G  F  K  R  R :   F  C  V  A  G  V  L  G  H  L  Q  S  K  H  L  I  L  H  Q  I  W  C  *  P  N  L  L  *  S  T  P  T  Y  C  I  E  K  *  F  I  F  S  H  Y  Y  Y  Y  Y  F  L  F  H  L  Y  F  F  I  S  *  N  I  F  F  L  W </second_frame>
            <third_frame>   A  L  L  *  G  G  W  G  L  T  *  M  D  *  C  L  K  S  R  *  N  R  *  V  L  Q  G  R  R  S  H  T  T  L  P  F  Y  H  G  K  K  F  F  A  T  S  E  S  S  R  K  A  E  G  N  N  N  I  K  T  V  H  D  V  L  L  M  P   : E  T  R  T  V  R  R  L  H  H  S  T  E  A  I  W  L  E  L  P  R  Q  S  *  V  I  P  S  M  *  L  I  F  N  P  *  Q  C  I  F  *  W  K  :  A  K  C  E  N  G  T  C  Q  H  L  K  *  Q  L  Q  A  Q  G  E  C  S  S  T  H  N  G  E  S  K  E   : G  W  M  E  L  G  *  M  D  *  Y  G  K  S  R  *  N  R  *  A  Y  R  M  K  R  I  R  R  S  H  S  A  H  P  F  Y  Q  S  M  E  K  F  F  A  T  N  E  S  S  R  K  A  A  V  N  N  I  Y  C  D  C  S  *  C  A  T  Y  A  R :   N  Y  S  D  K  E  S  A  A  F  C  R  S  Y  L  L  G  A  S  T  S  M  *  S  I  F  T  Q  V  V  V  T  V  Y  S  L  M  K   : G  Q  V  *  K  *  N  *  L  T  S  G  I  T  N  Y  K  L  K  G  E  C  T  S  T  L  N  G  D  S  K  E   : G  S  V  *  L  G  C  W  G  I  S  N  P  N  T  *  F  Y  T  K  F  G  V  N  Q  I  Y  C  N  Q  L  Q  P  T  A  S  K  N  N  L  F  S  L  I  I  I  I  I  I  F  Y  F  I  Y  I  F  L  F  H  K  T  F  S  F  Y   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E08.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="93782" stop="93882"/>
                    <exon start="93986" stop="94081"/>
                    <exon start="95209" stop="95278"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>264</number_coding_nucleotides>
                  <number_encoded_amino_acids>88</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GECSILQKLSARSFHIYVINLHPSCGDCVFSDERPSMKMKLANIWNNKLQAQRGVYKYTQWGFKRRFCVAGVLGHLQSKHLILHQIWC*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E08.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="94025" stop="94081"/>
                    <exon start="95209" stop="95403"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>252</number_coding_nucleotides>
                  <number_encoded_amino_acids>84</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QITSSKGSVQVHSMGIQKKVLCSWGVGASPIQTPNFTPNLVLTKFTVINSNLLHRKIIYFLSLLLLLFFISFIFFYFIKHFLSM</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E08.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="2" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="90884" stop="91019"/>
                    <exon start="91108" stop="91178"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>204</number_coding_nucleotides>
                  <number_encoded_amino_acids>68</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VLQGRRSHTTLPFYHGKKFFATSESSRKAEGNNNIKTVHDVLLMPETRTVRRLHHSTEAIWLELPRQS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="+" PGL_start="99039" PGL_stop="99354"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="99039" e_stop="99354"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.972"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.972">
            <gDNA_exon_boundary e_start="99039" e_stop="99354" e_length="316"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99039" stop="99354"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U590788" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAGCGGAAGCTACCGGAGTATAGAACTCGCCACCGTCGCAGGACCGGAACTTCATACGCAACCGGATGAAACCCCTAAAACCGAATCAATTTTCCCGCCGTCAGCTTCCCATCATGTTAGAATTCTTGAAAAATCTGGTAACTCGATGGTACTGTAAGATTTTCTTATCCATATTTAAAATAATCAAAGAAATCATTCTTTATTTTGAGAAACTCAATAAATCTTTTCTTTCTTGAAAAATAAGAATTTGTTTTCACTTCTTTAAGGAGAGAGGGGATGAATGCCCGAGACTATTTCTGTCAAAGGGGTTTTCTTG</gDNA_template>
            <first_frame> K  R  K  L  P  E  Y  R  T  R  H  R  R  R  T  G  T  S  Y  A  T  G  *  N  P  *  N  R  I  N  F  P  A  V  S  F  P  S  C  *  N  S  *  K  I  W  *  L  D  G  T  V  R  F  S  Y  P  Y  L  K  *  S  K  K  S  F  F  I  L  R  N  S  I  N  L  F  F  L  E  K  *  E  F  V  F  T  S  L  R  R  E  G  M  N  A  R  D  Y  F  C  Q  R  G  F  L  </first_frame>
            <second_frame>  S  G  S  Y  R  S  I  E  L  A  T  V  A  G  P  E  L  H  T  Q  P  D  E  T  P  K  T  E  S  I  F  P  P  S  A  S  H  H  V  R  I  L  E  K  S  G  N  S  M  V  L  *  D  F  L  I  H  I  *  N  N  Q  R  N  H  S  L  F  *  E  T  Q  *  I  F  S  F  L  K  N  K  N  L  F  S  L  L  *  G  E  R  G  *  M  P  E  T  I  S  V  K  G  V  F  L </second_frame>
            <third_frame>   A  E  A  T  G  V  *  N  S  P  P  S  Q  D  R  N  F  I  R  N  R  M  K  P  L  K  P  N  Q  F  S  R  R  Q  L  P  I  M  L  E  F  L  K  N  L  V  T  R  W  Y  C  K  I  F  L  S  I  F  K  I  I  K  E  I  I  L  Y  F  E  K  L  N  K  S  F  L  S  *  K  I  R  I  C  F  H  F  F  K  E  R  G  D  E  C  P  R  L  F  L  S  K  G  F  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E08.1" strand="+"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="99062" stop="99274"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NSPPSQDRNFIRNRMKPLKPNQFSRRQLPIMLEFLKNLVTRWYCKIFLSIFKIIKEIILYFEKLNKSFLS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="+" PGL_start="103436" PGL_stop="104635"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="103436" e_stop="103657"/>
            <exon e_start="103762" e_stop="103863"/>
            <exon e_start="103963" e_stop="104057"/>
            <exon e_start="104582" e_stop="104635"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.979" acc_prob="0.000" e_score="0.995"/>
          <exon-intron don_prob="0.000" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.815" acc_prob="0.993" e_score="0.989"/>
          <exon-only e_score="0.981"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="103436" e_stop="103657" e_length="222"/>
          </exon>
          <intron i_serial="1" don_prob="0.979" acc_prob="0.000">
            <gDNA_intron_boundary i_start="103658" i_stop="103761" i_length="104"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="103762" e_stop="103863" e_length="102"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.985">
            <gDNA_intron_boundary i_start="103864" i_stop="103962" i_length="99"/>
          </intron>
          <exon e_serial="3" e_score="0.989">
            <gDNA_exon_boundary e_start="103963" e_stop="104057" e_length="95"/>
          </exon>
          <intron i_serial="3" don_prob="0.815" acc_prob="0.993">
            <gDNA_intron_boundary i_start="104058" i_stop="104581" i_length="524"/>
          </intron>
          <exon e_serial="4" e_score="0.981">
            <gDNA_exon_boundary e_start="104582" e_stop="104635" e_length="54"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103436" stop="103657"/>
              <exon start="103762" stop="103863"/>
              <exon start="103963" stop="104057"/>
              <exon start="104582" stop="104635"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U583598" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACCGGAGCCGGAGTTCCAATTAGCAATAAGAGAAAAAGAAAAAAAGAAGTGAAATAAGCCTTAAAAGGCCAACCCCGAGCTTATAAGGAAGAAGATCAGAATAAGTCATTCAGGTCATTCATTTTACAAAAGCATGAAGTTCTTTGCCACGAATGAGTCTTCAAGAATGGTAGCAGTAACTAACAAATATTATGACTGTTCATGATGTGCCGCTCATGCCAG : GAGACTGCAGCAGTCTGCAGAGGCTATCTGCTCGGAGCTTCCACATCAATATAATCAATCTTCCACCCAAAGTCGTGGTGATGGTGTATTCTATGATGAAAG : GCCAAGTGTGAAAATGAAACTAGTTAACATCTGGAACAACAAATTACAAGCTCAAGGAGAGTGTACAAGTACACACGATGGGGAGTCAATAGAAG : GTGCAATTATGCTTGGAGATGCGTTGTTACCTTCAGCATGTTCTTTCATTGTTG</gDNA_template>
            <first_frame> T  G  A  G  V  P  I  S  N  K  R  K  R  K  K  E  V  K  *  A  L  K  G  Q  P  R  A  Y  K  E  E  D  Q  N  K  S  F  R  S  F  I  L  Q  K  H  E  V  L  C  H  E  *  V  F  K  N  G  S  S  N  *  Q  I  L  *  L  F  M  M  C  R  S  C  Q  :  E  T  A  A  V  C  R  G  Y  L  L  G  A  S  T  S  I  *  S  I  F  H  P  K  S  W  *  W  C  I  L  *  *  K  :  A  K  C  E  N  E  T  S  *  H  L  E  Q  Q  I  T  S  S  R  R  V  Y  K  Y  T  R  W  G  V  N  R  R :   C  N  Y  A  W  R  C  V  V  T  F  S  M  F  F  H  C   </first_frame>
            <second_frame>  P  E  P  E  F  Q  L  A  I  R  E  K  E  K  K  K  *  N  K  P  *  K  A  N  P  E  L  I  R  K  K  I  R  I  S  H  S  G  H  S  F  Y  K  S  M  K  F  F  A  T  N  E  S  S  R  M  V  A  V  T  N  K  Y  Y  D  C  S  *  C  A  A  H  A  R :   R  L  Q  Q  S  A  E  A  I  C  S  E  L  P  H  Q  Y  N  Q  S  S  T  Q  S  R  G  D  G  V  F  Y  D  E  R :   P  S  V  K  M  K  L  V  N  I  W  N  N  K  L  Q  A  Q  G  E  C  T  S  T  H  D  G  E  S  I  E   : G  A  I  M  L  G  D  A  L  L  P  S  A  C  S  F  I  V  </second_frame>
            <third_frame>   R  S  R  S  S  N  *  Q  *  E  K  K  K  K  R  S  E  I  S  L  K  R  P  T  P  S  L  *  G  R  R  S  E  *  V  I  Q  V  I  H  F  T  K  A  *  S  S  L  P  R  M  S  L  Q  E  W  *  Q  *  L  T  N  I  M  T  V  H  D  V  P  L  M  P   : G  D  C  S  S  L  Q  R  L  S  A  R  S  F  H  I  N  I  I  N  L  P  P  K  V  V  V  M  V  Y  S  M  M  K   : G  Q  V  *  K  *  N  *  L  T  S  G  T  T  N  Y  K  L  K  E  S  V  Q  V  H  T  M  G  S  Q  *  K  :  V  Q  L  C  L  E  M  R  C  Y  L  Q  H  V  L  S  L  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E08.1" strand="+"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="103641" stop="103657"/>
                    <exon start="103762" stop="103863"/>
                    <exon start="103963" stop="104057"/>
                    <exon start="104582" stop="104634"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>267</number_coding_nucleotides>
                  <number_encoded_amino_acids>89</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CAAHARRLQQSAEAICSELPHQYNQSSTQSRGDGVFYDERPSVKMKLVNIWNNKLQAQGECTSTHDGESIEGAIMLGDALLPSACSFIV</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="+" PGL_start="116626" PGL_stop="117290"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="116626" e_stop="117290"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="116626" e_stop="117290" e_length="665"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="116626" stop="117290"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U593829" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACTGCCCACTGCAGAACTTCTTCCTACGCTATACTCACCACCGTCGCAGAACCGGAAGCTACCGGAGTATAGAACTCGCCACCGTCGCAGAAGCGGAACCTACCGGAGTATAAAACTCGCCACCGTCGCAGGACCGGAACATCATACGCAACCGGATGAAAACCCCTAAAACCGAATCGATTTTCCCGCCGTCAGCTTCCCATCATGTTAGAATTCTTGAAAAATCTGGTAACTCGATGGTACAGAGTAAGATTTTCTTATCCATGTTTAAAGAAATCATTCTTTTTTTTAAGAAATTCAAGAAATCTTTTCTTTCTTAAAAAATCAAGAATTTGTGTTTACTTCTTTAAGGAGAGAGGGGATGAATGCCCGAGACTATTTCTGTCAATGGGGTTTTCTTGGATTATTGCACAAGTGTTGTTGACTAGTTCTTATAAAACAGAGTTGAATTTCTGTCAGGGGTTTTCTGAATGATTTCACCAGGGTTATTGATGAGTTGCTTTAAAACAGACTCAAATTTCTGTCCGAGTTTTCTTGAATGATTTTAAAAAAGCATCGATGCTGGTGCCACCAAGATGTACTAATTTACCCCTTCAAAGGTATTATATGGAAAGTTGTGGAGTTGTTCTTGAAGCCCCATTCGCACAATTCTAGTTTAATTATAA</gDNA_template>
            <first_frame> T  A  H  C  R  T  S  S  Y  A  I  L  T  T  V  A  E  P  E  A  T  G  V  *  N  S  P  P  S  Q  K  R  N  L  P  E  Y  K  T  R  H  R  R  R  T  G  T  S  Y  A  T  G  *  K  P  L  K  P  N  R  F  S  R  R  Q  L  P  I  M  L  E  F  L  K  N  L  V  T  R  W  Y  R  V  R  F  S  Y  P  C  L  K  K  S  F  F  F  L  R  N  S  R  N  L  F  F  L  K  K  S  R  I  C  V  Y  F  F  K  E  R  G  D  E  C  P  R  L  F  L  S  M  G  F  S  W  I  I  A  Q  V  L  L  T  S  S  Y  K  T  E  L  N  F  C  Q  G  F  S  E  *  F  H  Q  G  Y  *  *  V  A  L  K  Q  T  Q  I  S  V  R  V  F  L  N  D  F  K  K  A  S  M  L  V  P  P  R  C  T  N  L  P  L  Q  R  Y  Y  M  E  S  C  G  V  V  L  E  A  P  F  A  Q  F  *  F  N  Y   </first_frame>
            <second_frame>  L  P  T  A  E  L  L  P  T  L  Y  S  P  P  S  Q  N  R  K  L  P  E  Y  R  T  R  H  R  R  R  S  G  T  Y  R  S  I  K  L  A  T  V  A  G  P  E  H  H  T  Q  P  D  E  N  P  *  N  R  I  D  F  P  A  V  S  F  P  S  C  *  N  S  *  K  I  W  *  L  D  G  T  E  *  D  F  L  I  H  V  *  R  N  H  S  F  F  *  E  I  Q  E  I  F  S  F  L  K  N  Q  E  F  V  F  T  S  L  R  R  E  G  M  N  A  R  D  Y  F  C  Q  W  G  F  L  G  L  L  H  K  C  C  *  L  V  L  I  K  Q  S  *  I  S  V  R  G  F  L  N  D  F  T  R  V  I  D  E  L  L  *  N  R  L  K  F  L  S  E  F  S  *  M  I  L  K  K  H  R  C  W  C  H  Q  D  V  L  I  Y  P  F  K  G  I  I  W  K  V  V  E  L  F  L  K  P  H  S  H  N  S  S  L  I  I  </second_frame>
            <third_frame>   C  P  L  Q  N  F  F  L  R  Y  T  H  H  R  R  R  T  G  S  Y  R  S  I  E  L  A  T  V  A  E  A  E  P  T  G  V  *  N  S  P  P  S  Q  D  R  N  I  I  R  N  R  M  K  T  P  K  T  E  S  I  F  P  P  S  A  S  H  H  V  R  I  L  E  K  S  G  N  S  M  V  Q  S  K  I  F  L  S  M  F  K  E  I  I  L  F  F  K  K  F  K  K  S  F  L  S  *  K  I  K  N  L  C  L  L  L  *  G  E  R  G  *  M  P  E  T  I  S  V  N  G  V  F  L  D  Y  C  T  S  V  V  D  *  F  L  *  N  R  V  E  F  L  S  G  V  F  *  M  I  S  P  G  L  L  M  S  C  F  K  T  D  S  N  F  C  P  S  F  L  E  *  F  *  K  S  I  D  A  G  A  T  K  M  Y  *  F  T  P  S  K  V  L  Y  G  K  L  W  S  C  S  *  S  P  I  R  T  I  L  V  *  L  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E08.1" strand="+"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="116785" stop="117099"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>312</number_coding_nucleotides>
                  <number_encoded_amino_acids>104</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KPLKPNRFSRRQLPIMLEFLKNLVTRWYRVRFSYPCLKKSFFFLRNSRNLFFLKKSRICVYFFKERGDECPRLFLSMGFSWIIAQVLLTSSYKTELNFCQGFSE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="+" PGL_start="120891" PGL_stop="131100"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="120891" e_stop="121278"/>
            <exon e_start="121368" e_stop="121484"/>
            <exon e_start="121588" e_stop="121683"/>
            <exon e_start="122851" e_stop="123011"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.929" acc_prob="0.953" e_score="0.992"/>
          <exon-intron don_prob="0.292" acc_prob="0.972" e_score="1.000"/>
          <exon-intron don_prob="0.712" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.992">
            <gDNA_exon_boundary e_start="120891" e_stop="121278" e_length="388"/>
          </exon>
          <intron i_serial="1" don_prob="0.929" acc_prob="0.953">
            <gDNA_intron_boundary i_start="121279" i_stop="121367" i_length="89"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="121368" e_stop="121484" e_length="117"/>
          </exon>
          <intron i_serial="2" don_prob="0.292" acc_prob="0.972">
            <gDNA_intron_boundary i_start="121485" i_stop="121587" i_length="103"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="121588" e_stop="121683" e_length="96"/>
          </exon>
          <intron i_serial="3" don_prob="0.712" acc_prob="1.000">
            <gDNA_intron_boundary i_start="121684" i_stop="122850" i_length="1167"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="122851" e_stop="123011" e_length="161"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="120891" stop="121278"/>
              <exon start="121368" stop="121484"/>
              <exon start="121588" stop="121683"/>
              <exon start="122851" stop="123011"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U580676" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCTTGATTTGTATGCTTGTTCTAAAGAGGATATGGGGCAGTATAGGGGCTCTTGATGCGTGGGTTGTTTATAGTTCAGGTCCTTCTGAATTCTATTATGAAGGAGATGATTTGTCACTTTTACATTCTCATGGTGTAGATAACCTTAATAATTATTTGACACCACGAGCTATGCTCTCCTCTAGGGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAGTTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACAAATATTGTGACTGTTCGTGATGTGCCACTTATGCCAG : AAACTACAGCGACAAGGAGACTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCACCCCAAGTTGTGGTGACTGTGTATTGTCTGATGAAAG : GCCAAGTATGAAAATGAAACTAGTTAACATCTGGAATAACAAATTACAAGCTCAAAGGAGAGTGTACAAGTACACTCAATGGGGATTCAAAAGAAG : GTTCTGTGTAGCTGGGGTGTTAGGGCATCTCCAATCCAAACACCTAATTTTACATCAAATTTGGTGTTAACCAAATTTACTGTAATCAACTCCAATCTACTGCATCGAAAAATAATTTATTTTCTCTCTTTATTATTATATTATTATTTTTTATTTCATTT</gDNA_template>
            <first_frame> S  *  F  V  C  L  F  *  R  G  Y  G  A  V  *  G  L  L  M  R  G  L  F  I  V  Q  V  L  L  N  S  I  M  K  E  M  I  C  H  F  Y  I  L  M  V  *  I  T  L  I  I  I  *  H  H  E  L  C  S  P  L  G  W  M  E  L  G  *  M  D  *  Y  G  K  S  R  *  N  R  *  A  Y  R  M  K  R  I  R  R  S  H  S  A  H  P  F  Y  Q  S  M  E  K  F  L  P  Q  M  S  L  Q  E  K  Q  Q  *  I  T  N  I  V  T  V  R  D  V  P  L  M  P   : E  T  T  A  T  R  R  L  Q  H  S  A  E  A  I  C  S  E  L  P  H  L  C  N  Q  S  S  P  Q  V  V  V  T  V  Y  C  L  M  K   : G  Q  V  *  K  *  N  *  L  T  S  G  I  T  N  Y  K  L  K  G  E  C  T  S  T  L  N  G  D  S  K  E   : G  S  V  *  L  G  C  *  G  I  S  N  P  N  T  *  F  Y  I  K  F  G  V  N  Q  I  Y  C  N  Q  L  Q  S  T  A  S  K  N  N  L  F  S  L  F  I  I  I  L  L  F  F  I  S  F </first_frame>
            <second_frame>  L  D  L  Y  A  C  S  K  E  D  M  G  Q  Y  R  G  S  *  C  V  G  C  L  *  F  R  S  F  *  I  L  L  *  R  R  *  F  V  T  F  T  F  S  W  C  R  *  P  *  *  L  F  D  T  T  S  Y  A  L  L  *  G  G  W  N  S  G  K  W  I  D  T  G  N  Q  G  K  T  D  E  L  I  G  *  R  G  S  E  E  V  I  Q  L  I  H  F  T  K  A  W  R  S  F  C  H  K  *  V  F  K  K  S  S  S  K  *  Q  I  L  *  L  F  V  M  C  H  L  C  Q  :  K  L  Q  R  Q  G  D  C  S  I  L  Q  K  L  S  A  R  S  F  H  I  Y  V  I  N  L  H  P  K  L  W  *  L  C  I  V  *  *  K  :  A  K  Y  E  N  E  T  S  *  H  L  E  *  Q  I  T  S  S  K  E  S  V  Q  V  H  S  M  G  I  Q  K  K  :  V  L  C  S  W  G  V  R  A  S  P  I  Q  T  P  N  F  T  S  N  L  V  L  T  K  F  T  V  I  N  S  N  L  L  H  R  K  I  I  Y  F  L  S  L  L  L  Y  Y  Y  F  L  F  H   </second_frame>
            <third_frame>   L  I  C  M  L  V  L  K  R  I  W  G  S  I  G  A  L  D  A  W  V  V  Y  S  S  G  P  S  E  F  Y  Y  E  G  D  D  L  S  L  L  H  S  H  G  V  D  N  L  N  N  Y  L  T  P  R  A  M  L  S  S  R  V  D  G  T  R  V  N  G  L  I  R  E  I  K  V  K  Q  M  S  L  *  D  E  E  D  Q  K  K  S  F  S  S  S  I  L  P  K  H  G  E  V  F  A  T  N  E  S  S  R  K  A  A  V  N  N  K  Y  C  D  C  S  *  C  A  T  Y  A  R :   N  Y  S  D  K  E  T  A  A  F  C  R  S  Y  L  L  G  A  S  T  S  M  *  S  I  F  T  P  S  C  G  D  C  V  L  S  D  E  R :   P  S  M  K  M  K  L  V  N  I  W  N  N  K  L  Q  A  Q  R  R  V  Y  K  Y  T  Q  W  G  F  K  R  R :   F  C  V  A  G  V  L  G  H  L  Q  S  K  H  L  I  L  H  Q  I  W  C  *  P  N  L  L  *  S  T  P  I  Y  C  I  E  K  *  F  I  F  S  L  Y  Y  Y  I  I  I  F  Y  F  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E08.1" strand="+"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="120893" stop="121138"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>243</number_coding_nucleotides>
                  <number_encoded_amino_acids>81</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LICMLVLKRIWGSIGALDAWVVYSSGPSEFYYEGDDLSLLHSHGVDNLNNYLTPRAMLSSRVDGTRVNGLIREIKVKQMSL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E08.1" strand="+"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="121627" stop="121683"/>
                    <exon start="122851" stop="123009"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>216</number_coding_nucleotides>
                  <number_encoded_amino_acids>72</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QITSSKESVQVHSMGIQKKVLCSWGVRASPIQTPNFTSNLVLTKFTVINSNLLHRKIIYFLSLLLYYYFLFH</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E08.1" strand="+"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="121438" stop="121484"/>
                    <exon start="121588" stop="121683"/>
                    <exon start="122851" stop="122920"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SIFTPSCGDCVLSDERPSMKMKLVNIWNNKLQAQRRVYKYTQWGFKRRFCVAGVLGHLQSKHLILHQIWC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="129422" e_stop="130006"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="129422" e_stop="130006" e_length="585"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="129422" stop="130006"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U590718" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGGATAACGAATTCAGTGTTTCAGCTAGCTCCAGTTACAAATCAGACTGCCTATTAGTTCTATGACTTCCTTTTCTCTTGAGCTACTTTTGGAAAGCCTAGATAAGAATATAGTTGTTGAAGTATCCTCCTCATCTGTTGCTATCCCATTCCCTGCTCCACTTTTCAGATATACCTGTGAATTATGAGATCAGGAAAAAGAGGTGCAGGACCCAGAGTTGCAAAGTGACACTTGAACTTCGTTCCTGCAGCCAAAGAAATTGACCGGAGAGTGCACTGTCAGGAGTTAGATTCGATCTTCACGGATTATTCTGTGGGGAAGTACTTCTGAAAAGCAAGATCCTGAGTCCAGATTCCTCTGTCAGATCAAAAGTACTTCACGGATTGTTTCCACATGCTGCAAAAAGAGATCTCGATTTTATGCTTGTTCTAAAGAGGATATGAGTATTATAGGGGAAGTTGATGCTTGGGATGTTTATAGTTCAGGTCCTTCTGCATTCTATTATGATGGAGATGATTTGTCACATATACATTCTCATGGTGAAGAAAACCTTAAAAATTATTTGACACTCGAGCTATGCTCTTC</gDNA_template>
            <first_frame> W  I  T  N  S  V  F  Q  L  A  P  V  T  N  Q  T  A  Y  *  F  Y  D  F  L  F  S  *  A  T  F  G  K  P  R  *  E  Y  S  C  *  S  I  L  L  I  C  C  Y  P  I  P  C  S  T  F  Q  I  Y  L  *  I  M  R  S  G  K  R  G  A  G  P  R  V  A  K  *  H  L  N  F  V  P  A  A  K  E  I  D  R  R  V  H  C  Q  E  L  D  S  I  F  T  D  Y  S  V  G  K  Y  F  *  K  A  R  S  *  V  Q  I  P  L  S  D  Q  K  Y  F  T  D  C  F  H  M  L  Q  K  E  I  S  I  L  C  L  F  *  R  G  Y  E  Y  Y  R  G  S  *  C  L  G  C  L  *  F  R  S  F  C  I  L  L  *  W  R  *  F  V  T  Y  T  F  S  W  *  R  K  P  *  K  L  F  D  T  R  A  M  L  F </first_frame>
            <second_frame>  G  *  R  I  Q  C  F  S  *  L  Q  L  Q  I  R  L  P  I  S  S  M  T  S  F  S  L  E  L  L  L  E  S  L  D  K  N  I  V  V  E  V  S  S  S  S  V  A  I  P  F  P  A  P  L  F  R  Y  T  C  E  L  *  D  Q  E  K  E  V  Q  D  P  E  L  Q  S  D  T  *  T  S  F  L  Q  P  K  K  L  T  G  E  C  T  V  R  S  *  I  R  S  S  R  I  I  L  W  G  S  T  S  E  K  Q  D  P  E  S  R  F  L  C  Q  I  K  S  T  S  R  I  V  S  T  C  C  K  K  R  S  R  F  Y  A  C  S  K  E  D  M  S  I  I  G  E  V  D  A  W  D  V  Y  S  S  G  P  S  A  F  Y  Y  D  G  D  D  L  S  H  I  H  S  H  G  E  E  N  L  K  N  Y  L  T  L  E  L  C  S   </second_frame>
            <third_frame>   D  N  E  F  S  V  S  A  S  S  S  Y  K  S  D  C  L  L  V  L  *  L  P  F  L  L  S  Y  F  W  K  A  *  I  R  I  *  L  L  K  Y  P  P  H  L  L  L  S  H  S  L  L  H  F  S  D  I  P  V  N  Y  E  I  R  K  K  R  C  R  T  Q  S  C  K  V  T  L  E  L  R  S  C  S  Q  R  N  *  P  E  S  A  L  S  G  V  R  F  D  L  H  G  L  F  C  G  E  V  L  L  K  S  K  I  L  S  P  D  S  S  V  R  S  K  V  L  H  G  L  F  P  H  A  A  K  R  D  L  D  F  M  L  V  L  K  R  I  *  V  L  *  G  K  L  M  L  G  M  F  I  V  Q  V  L  L  H  S  I  M  M  E  M  I  C  H  I  Y  I  L  M  V  K  K  T  L  K  I  I  *  H  S  S  Y  A  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E08.1" strand="+"/>
                <serials PGL_serial="17" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="129711" stop="130004"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>294</number_coding_nucleotides>
                  <number_encoded_amino_acids>98</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IRSSRIILWGSTSEKQDPESRFLCQIKSTSRIVSTCCKKRSRFYACSKEDMSIIGEVDAWDVYSSGPSAFYYDGDDLSHIHSHGEENLKNYLTLELCS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="121064" e_stop="121278"/>
            <exon e_start="121368" e_stop="121484"/>
            <exon e_start="121588" e_stop="121683"/>
            <exon e_start="130875" e_stop="131100"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.929" acc_prob="0.953" e_score="0.981"/>
          <exon-intron don_prob="0.292" acc_prob="0.972" e_score="0.974"/>
          <exon-intron don_prob="0.712" acc_prob="0.445" e_score="0.948"/>
          <exon-only e_score="0.850"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.981">
            <gDNA_exon_boundary e_start="121064" e_stop="121278" e_length="215"/>
          </exon>
          <intron i_serial="1" don_prob="0.929" acc_prob="0.953">
            <gDNA_intron_boundary i_start="121279" i_stop="121367" i_length="89"/>
          </intron>
          <exon e_serial="2" e_score="0.974">
            <gDNA_exon_boundary e_start="121368" e_stop="121484" e_length="117"/>
          </exon>
          <intron i_serial="2" don_prob="0.292" acc_prob="0.972">
            <gDNA_intron_boundary i_start="121485" i_stop="121587" i_length="103"/>
          </intron>
          <exon e_serial="3" e_score="0.948">
            <gDNA_exon_boundary e_start="121588" e_stop="121683" e_length="96"/>
          </exon>
          <intron i_serial="3" don_prob="0.712" acc_prob="0.445">
            <gDNA_intron_boundary i_start="121684" i_stop="130874" i_length="9191"/>
          </intron>
          <exon e_serial="4" e_score="0.850">
            <gDNA_exon_boundary e_start="130875" e_stop="131100" e_length="226"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="121064" stop="121278"/>
              <exon start="121368" stop="121484"/>
              <exon start="121588" stop="121683"/>
              <exon start="130875" stop="131100"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U578040" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTCTCCTCTAGGGTGGATGGAACTCGGGTAAATGGATTGATACGGGAAATCAAGGTAAAACAGATGAGCTTATAGGATGAAGAGGATCAGAAGAAGTCATTCAGCTCATCCATTTTACCAAAGCATGGAGAAGTTTTTGCCACAAATGAGTCTTCAAGAAAAGCAGCAGTAAATAACAAATATTGTGACTGTTCGTGATGTGCCACTTATGCCAG : AAACTACAGCGACAAGGAGACTGCAGCATTCTGCAGAAGCTATCTGCTCGGAGCTTCCACATCTATGTAATCAATCTTCACCCCAAGTTGTGGTGACTGTGTATTGTCTGATGAAAG : GCCAAGTATGAAAATGAAACTAGTTAACATCTGGAATAACAAATTACAAGCTCAAAGGAGAGTGTACAAGTACACTCAATGGGGATTCAAAAGAAG : AATTCGCACCAACAAAAACTCAAAAAGTTTCTTATTTCTCGGACAAAATTTCAGAAGTTGCACCAAAAATGATTTTGAGATATTTTTCTTAATTCCTTTGTCTTTGTTTTCATTTGTGTTGGAACAATGACCCTGATATGGATAGAGTGGAAAAGATTCAAAGGAATGAGGATAAATATAACACGGCTACTAATTTTGGGGAGCAGCATAATTGATGGATTGATTG</gDNA_template>
            <first_frame> L  S  S  R  V  D  G  T  R  V  N  G  L  I  R  E  I  K  V  K  Q  M  S  L  *  D  E  E  D  Q  K  K  S  F  S  S  S  I  L  P  K  H  G  E  V  F  A  T  N  E  S  S  R  K  A  A  V  N  N  K  Y  C  D  C  S  *  C  A  T  Y  A  R :   N  Y  S  D  K  E  T  A  A  F  C  R  S  Y  L  L  G  A  S  T  S  M  *  S  I  F  T  P  S  C  G  D  C  V  L  S  D  E  R :   P  S  M  K  M  K  L  V  N  I  W  N  N  K  L  Q  A  Q  R  R  V  Y  K  Y  T  Q  W  G  F  K  R  R :   I  R  T  N  K  N  S  K  S  F  L  F  L  G  Q  N  F  R  S  C  T  K  N  D  F  E  I  F  F  L  I  P  L  S  L  F  S  F  V  L  E  Q  *  P  *  Y  G  *  S  G  K  D  S  K  E  *  G  *  I  *  H  G  Y  *  F  W  G  A  A  *  L  M  D  *  L </first_frame>
            <second_frame>  S  P  L  G  W  M  E  L  G  *  M  D  *  Y  G  K  S  R  *  N  R  *  A  Y  R  M  K  R  I  R  R  S  H  S  A  H  P  F  Y  Q  S  M  E  K  F  L  P  Q  M  S  L  Q  E  K  Q  Q  *  I  T  N  I  V  T  V  R  D  V  P  L  M  P   : E  T  T  A  T  R  R  L  Q  H  S  A  E  A  I  C  S  E  L  P  H  L  C  N  Q  S  S  P  Q  V  V  V  T  V  Y  C  L  M  K   : G  Q  V  *  K  *  N  *  L  T  S  G  I  T  N  Y  K  L  K  G  E  C  T  S  T  L  N  G  D  S  K  E   : E  F  A  P  T  K  T  Q  K  V  S  Y  F  S  D  K  I  S  E  V  A  P  K  M  I  L  R  Y  F  S  *  F  L  C  L  C  F  H  L  C  W  N  N  D  P  D  M  D  R  V  E  K  I  Q  R  N  E  D  K  Y  N  T  A  T  N  F  G  E  Q  H  N  *  W  I  D   </second_frame>
            <third_frame>   L  L  *  G  G  W  N  S  G  K  W  I  D  T  G  N  Q  G  K  T  D  E  L  I  G  *  R  G  S  E  E  V  I  Q  L  I  H  F  T  K  A  W  R  S  F  C  H  K  *  V  F  K  K  S  S  S  K  *  Q  I  L  *  L  F  V  M  C  H  L  C  Q  :  K  L  Q  R  Q  G  D  C  S  I  L  Q  K  L  S  A  R  S  F  H  I  Y  V  I  N  L  H  P  K  L  W  *  L  C  I  V  *  *  K  :  A  K  Y  E  N  E  T  S  *  H  L  E  *  Q  I  T  S  S  K  E  S  V  Q  V  H  S  M  G  I  Q  K  K  :  N  S  H  Q  Q  K  L  K  K  F  L  I  S  R  T  K  F  Q  K  L  H  Q  K  *  F  *  D  I  F  L  N  S  F  V  F  V  F  I  C  V  G  T  M  T  L  I  W  I  E  W  K  R  F  K  G  M  R  I  N  I  T  R  L  L  I  L  G  S  S  I  I  D  G  L  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E08.1" strand="+"/>
                <serials PGL_serial="17" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="121438" stop="121484"/>
                    <exon start="121588" stop="121683"/>
                    <exon start="130875" stop="131004"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>270</number_coding_nucleotides>
                  <number_encoded_amino_acids>90</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SIFTPSCGDCVLSDERPSMKMKLVNIWNNKLQAQRRVYKYTQWGFKRRIRTNKNSKSFLFLGQNFRSCTKNDFEIFFLIPLSLFSFVLEQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="18" PGL_strand="+" PGL_start="131610" PGL_stop="138640"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="131610" e_stop="131668"/>
            <exon e_start="132530" e_stop="132573"/>
            <exon e_start="134885" e_stop="135064"/>
            <exon e_start="136219" e_stop="136281"/>
            <exon e_start="136473" e_stop="136512"/>
            <exon e_start="138370" e_stop="138640"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.683" acc_prob="0.796" e_score="0.949"/>
          <exon-intron don_prob="0.999" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.876" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.980" acc_prob="0.892" e_score="1.000"/>
          <exon-intron don_prob="0.952" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.949">
            <gDNA_exon_boundary e_start="131610" e_stop="131668" e_length="59"/>
          </exon>
          <intron i_serial="1" don_prob="0.683" acc_prob="0.796">
            <gDNA_intron_boundary i_start="131669" i_stop="132529" i_length="861"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="132530" e_stop="132573" e_length="44"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.998">
            <gDNA_intron_boundary i_start="132574" i_stop="134884" i_length="2311"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="134885" e_stop="135064" e_length="180"/>
          </exon>
          <intron i_serial="3" don_prob="0.876" acc_prob="0.997">
            <gDNA_intron_boundary i_start="135065" i_stop="136218" i_length="1154"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="136219" e_stop="136281" e_length="63"/>
          </exon>
          <intron i_serial="4" don_prob="0.980" acc_prob="0.892">
            <gDNA_intron_boundary i_start="136282" i_stop="136472" i_length="191"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="136473" e_stop="136512" e_length="40"/>
          </exon>
          <intron i_serial="5" don_prob="0.952" acc_prob="0.000">
            <gDNA_intron_boundary i_start="136513" i_stop="138369" i_length="1857"/>
          </intron>
          <exon e_serial="6" e_score="0.993">
            <gDNA_exon_boundary e_start="138370" e_stop="138640" e_length="271"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="131610" stop="131668"/>
              <exon start="132530" stop="132573"/>
              <exon start="134885" stop="135064"/>
              <exon start="136219" stop="136281"/>
              <exon start="136473" stop="136512"/>
              <exon start="138370" stop="138640"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U577804" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGAAGGAGAATCTGATCTGGAGCACAATGCATCTAAACAGATTCAACAAATAAATGCAT : GCATTAATTCAATTGATGTGGACCTGTAAGAATTTCTTCAACAG : GAGACCAACTACTGTTTCTCTTGTCAACTTGGGTGCTCTGCTTGAGCAGATTGCTAAGTTAGGTTCATTGAGTAGGGGTTCCTCCAAGGCATGGCATGAATAGCATCGTCATGAAATCAACCTAAAGCGTTTTGCAGAACGACTAAGATCATCCGTATCCTAGTGTCTAAAAACTCTCGT : GTGGTTCCGTGTATTTTGGGAGTTAGTCCAACTTATGTGGACCTGTAAGAATTTCTTCGACAT : AACCGGAGGGGATGAAACCGAAGGCTCCCAATGAGATTCG : CATTCTCTAACATCCAATGGAAGGAGCGGAAACCACACTGGATCATGAATCAGGTGCTGGAATACTTTCTGATTTACTGCCATCTGTAGCTATTTTAGTAGCTTAGTATAGCGATTCCATACATTGGTTTTTTTTACGGAGTTTACATTGCAATAACATTTCTTTTCATAAATGTACTACTGTTAATTGCAAAAAGATGTAATCTCACTTATTCCTGAATAGAGATCTGTATCATGTATCAATTATAGTACTCACATACTCTGTTCCTCTA</gDNA_template>
            <first_frame> *  R  R  I  *  S  G  A  Q  C  I  *  T  D  S  T  N  K  C  M :   H  *  F  N  *  C  G  P  V  R  I  S  S  T   : G  D  Q  L  L  F  L  L  S  T  W  V  L  C  L  S  R  L  L  S  *  V  H  *  V  G  V  P  P  R  H  G  M  N  S  I  V  M  K  S  T  *  S  V  L  Q  N  D  *  D  H  P  Y  P  S  V  *  K  L  S   : C  G  S  V  Y  F  G  S  *  S  N  L  C  G  P  V  R  I  S  S  T   : *  P  E  G  M  K  P  K  A  P  N  E  I  R :   I  L  *  H  P  M  E  G  A  E  T  T  L  D  H  E  S  G  A  G  I  L  S  D  L  L  P  S  V  A  I  L  V  A  *  Y  S  D  S  I  H  W  F  F  L  R  S  L  H  C  N  N  I  S  F  H  K  C  T  T  V  N  C  K  K  M  *  S  H  L  F  L  N  R  D  L  Y  H  V  S  I  I  V  L  T  Y  S  V  P  L </first_frame>
            <second_frame>  E  G  E  S  D  L  E  H  N  A  S  K  Q  I  Q  Q  I  N  A   : C  I  N  S  I  D  V  D  L  *  E  F  L  Q  Q  :  E  T  N  Y  C  F  S  C  Q  L  G  C  S  A  *  A  D  C  *  V  R  F  I  E  *  G  F  L  Q  G  M  A  *  I  A  S  S  *  N  Q  P  K  A  F  C  R  T  T  K  I  I  R  I  L  V  S  K  N  S  R  :  V  V  P  C  I  L  G  V  S  P  T  Y  V  D  L  *  E  F  L  R  H  :  N  R  R  G  *  N  R  R  L  P  M  R  F   : A  F  S  N  I  Q  W  K  E  R  K  P  H  W  I  M  N  Q  V  L  E  Y  F  L  I  Y  C  H  L  *  L  F  *  *  L  S  I  A  I  P  Y  I  G  F  F  Y  G  V  Y  I  A  I  T  F  L  F  I  N  V  L  L  L  I  A  K  R  C  N  L  T  Y  S  *  I  E  I  C  I  M  Y  Q  L  *  Y  S  H  T  L  F  L   </second_frame>
            <third_frame>   K  E  N  L  I  W  S  T  M  H  L  N  R  F  N  K  *  M  H  :  A  L  I  Q  L  M  W  T  C  K  N  F  F  N  R :   R  P  T  T  V  S  L  V  N  L  G  A  L  L  E  Q  I  A  K  L  G  S  L  S  R  G  S  S  K  A  W  H  E  *  H  R  H  E  I  N  L  K  R  F  A  E  R  L  R  S  S  V  S  *  C  L  K  T  L  V :   W  F  R  V  F  W  E  L  V  Q  L  M  W  T  C  K  N  F  F  D  I :   T  G  G  D  E  T  E  G  S  Q  *  D  S  :  H  S  L  T  S  N  G  R  S  G  N  H  T  G  S  *  I  R  C  W  N  T  F  *  F  T  A  I  C  S  Y  F  S  S  L  V  *  R  F  H  T  L  V  F  F  T  E  F  T  L  Q  *  H  F  F  S  *  M  Y  Y  C  *  L  Q  K  D  V  I  S  L  I  P  E  *  R  S  V  S  C  I  N  Y  S  T  H  I  L  C  S  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0236E08.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="19" PGL_strand="-" PGL_start="135698" PGL_stop="135549"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="135698" e_stop="135549"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.947"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.947">
            <gDNA_exon_boundary e_start="135698" e_stop="135549" e_length="150"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="135698" stop="135549"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U596918" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTCCCTCTTTTTCCAAGAATTCATCCACTTCCCCTTACTCCATAGGGCCTTCTCTAATAGGGAAAAGCCTTCCATTTCCGTCAAATGACCCAGCCTCCCCTGGCTCTTCCACCGTCCGAGCTCCCTTTCCTCCCTATGGTATGCTCCCCC</gDNA_template>
            <first_frame> L  P  L  F  P  R  I  H  P  L  P  L  T  P  *  G  L  L  *  *  G  K  A  F  H  F  R  Q  M  T  Q  P  P  L  A  L  P  P  S  E  L  P  F  L  P  M  V  C  S  P </first_frame>
            <second_frame>  S  L  F  F  Q  E  F  I  H  F  P  L  L  H  R  A  F  S  N  R  E  K  P  S  I  S  V  K  *  P  S  L  P  W  L  F  H  R  P  S  S  L  S  S  L  W  Y  A  P   </second_frame>
            <third_frame>   P  S  F  S  K  N  S  S  T  S  P  Y  S  I  G  P  S  L  I  G  K  S  L  P  F  P  S  N  D  P  A  S  P  G  S  S  T  V  R  A  P  F  P  P  Y  G  M  L  P  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0236E08.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 52 chains have been computed
$ 
$ memory statistics:
$ 164664 bytes spliced alignments in total
$ 25 spliced alignments have been stored
$ 6586 bytes was the average size of a spliced alignment
$ 28656 bytes predicted gene locations in total
$ 19 predicted gene locations have been stored
$ 1508 bytes was the average size of a predicted gene location
$ 3 megabytes was the average size of the backtrace matrix
$ 63 backtrace matrices have been allocated
$ 
$ date finished: 2009-12-01 10:24:11
-->
