<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-12-01 10:28:58"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U569184" ref_strand="+" ref_description="SGN-U569184 Tomato 200607#2 [7 ESTs aligned] (*GB) gi|147812026|emb|CAN65788.1| (e_value=5e-32) hypothetical; (*ATH) AT1G70420.1 (e_value=7e-19) | Symbol: None | expressed protein | chr1:26543237-26544425 REVERSE | Aliases: F17O7.4, F17O7_4; ">
      <seq>gggggtcataaataattctctctccattaataggatcataacctacagagacactaaacgtgcaccagagcgtttatgaaattacaactactcacatgcaggaagacgaatttttttctccgagctttagtagctactcttcaaatagagtggccgagattgccggaaaaatctccgatgaaattaagcgtgattctcaggtggtagaagagaacgttgacggtgccgatggagatgaagattttgaattctctttggtttgtgaaaatccagaggattcggtcggcgtattccccttcgaccgtcctatttaccccgttttcaaccgcgatctgataccaaacgatgtttcttatggcgtagatcgagaaggtgttaacggtgaatcgtcggaaaacgtcaatagttcagttcaagtttcgttaaaggatttattcttagaagaacgggaaccgctgtcgtcgtcatcttccgaggtcgatgagttggagagtgtacctccgggaacgtattgtgtatggaagccgaatataaccgagccttcaccaagcagatgtaagaagagtaattcaacgggatcggcgtttaagcggtggaatatccgagatttgatgcgccggagcaacagtgacggtaaggacagttttttatttctgacgccggaaaaaggattgagaaatgaaacatccaaagcaaaggactcagcggaagcgtctaaaattgccggaaaattgaaggcaaagggcaacagtagcagcggtaacaaaacatcttcgatgacggacgtttatttacggaaccaagcggcaaaggaaatggataagaataggcgcaaatcatatttaccataccggcgagatctggtaggttttttcgctagtgccagcaatattggtagaacttttcctcctttttaacaaccttccattttttaatcaagtgtttgtaaatatctaaatgaaagaacatgtgcgatgattcctgaatgatttagttgttatgctcccatttgtttaaaggatgatcatccacctcgataataattttcgatgaatttttcatattatctatgaattaaatttgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E02.1" temp_strand="+" temp_description="C02HBa0236E02.1  AC215430.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E02 sequenced_by:kribb upload_account_name:korea">
        <position start="6668" stop="8348"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="6964" g_stop="8048" g_length="1085"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1085" r_length="1085" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E02.1" gen_strand="+" ref_id="SGN-U569184" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>1085</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U569184" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="6964" e_stop="8048"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCTGTCATAAATAATTCTCTCTCCATTAATAGGATCATAACCTACAGAGACACTAAACGTGCACCAGAGCGTTTATGAAATTACAACTACTCACATGCAGGAAGACGAATTTTTTTCTCCGAGCTTTAGTAGCTACTCTTCAAATAGAGTGGCCGAGATTGCCGGAAAAATCTCCGATGAAATTAAGCGTGATTCTCAGGTGGTAGAAGAGAACGTTGACGGTGCCGATGGAGATGAAGATTTTGAATTCTCTTTGGTTTGTGAAAATCCAGAGGATTCGGTCGGCGTATTCCCCTTCGACCGTCCTATTTACCCCGTTTTCAACCGCGATCTGATACCAAACGATGTTTCTTATGGCGTAGATCGAGAAGGTGTTAACGGTGAATCGTCGGAAAACGTCAATAGTTCAGTTCAAGTTTCGTTAAAGGATTTATTCTTAGAAGAACGGGAACCGCTGTCGTCGTCATCTTCCGAGGTCGATGAGTTGGAGAGTGTACCTCCGGGAACGTATTGTGTATGGAAGCCGAATATAACCGAGCCTTCACCAAGCAGATGTAAGAAGAGTAATTCAACGGGATCGGCGTTTAAGCGGTGGAATATCCGAGATTTGATGCGCCGGAGCAACAGTGACGGTAAGGACAGTTTTTTATTTCTGACGCCGGAAAAAGGATTGAGAAATGAAACATCCAAAGCAAAGGACTCAGCGGAAGCGTCTAAAATTGCCGGAAAATTGAAGGCAAAGGGCAACAGTAGCAGCGGTAACAAAACATCTTCGATGACGGACGTTTATTTACGGAACCAAGCGGCAAAGGAAATGGATAAGAATAGGCGCAAATCATATTTACCATACCGGCGAGATCTGGTAGGTTTTTTCGCTAGTGCCAGCAATATTGGTAGAACTTTTCCTCCTTTTTAACAACCTTCCATTTTTTAATCAAGTGTTTGTAAATATCTAAATGAAAGAACATGTGCGATGATTCCTGAATGATTTAGTTGTTATGCTCCCATTTGTTTAAAGGATGATCATCCACCTCGATAATAATTTTCGATGAATTTTTCATATTATCTATGAATTAAATTTGAT</genome_strand>
        <mrna_strand>GGGGGTCATAAATAATTCTCTCTCCATTAATAGGATCATAACCTACAGAGACACTAAACGTGCACCAGAGCGTTTATGAAATTACAACTACTCACATGCAGGAAGACGAATTTTTTTCTCCGAGCTTTAGTAGCTACTCTTCAAATAGAGTGGCCGAGATTGCCGGAAAAATCTCCGATGAAATTAAGCGTGATTCTCAGGTGGTAGAAGAGAACGTTGACGGTGCCGATGGAGATGAAGATTTTGAATTCTCTTTGGTTTGTGAAAATCCAGAGGATTCGGTCGGCGTATTCCCCTTCGACCGTCCTATTTACCCCGTTTTCAACCGCGATCTGATACCAAACGATGTTTCTTATGGCGTAGATCGAGAAGGTGTTAACGGTGAATCGTCGGAAAACGTCAATAGTTCAGTTCAAGTTTCGTTAAAGGATTTATTCTTAGAAGAACGGGAACCGCTGTCGTCGTCATCTTCCGAGGTCGATGAGTTGGAGAGTGTACCTCCGGGAACGTATTGTGTATGGAAGCCGAATATAACCGAGCCTTCACCAAGCAGATGTAAGAAGAGTAATTCAACGGGATCGGCGTTTAAGCGGTGGAATATCCGAGATTTGATGCGCCGGAGCAACAGTGACGGTAAGGACAGTTTTTTATTTCTGACGCCGGAAAAAGGATTGAGAAATGAAACATCCAAAGCAAAGGACTCAGCGGAAGCGTCTAAAATTGCCGGAAAATTGAAGGCAAAGGGCAACAGTAGCAGCGGTAACAAAACATCTTCGATGACGGACGTTTATTTACGGAACCAAGCGGCAAAGGAAATGGATAAGAATAGGCGCAAATCATATTTACCATACCGGCGAGATCTGGTAGGTTTTTTCGCTAGTGCCAGCAATATTGGTAGAACTTTTCCTCCTTTTTAACAACCTTCCATTTTTTAATCAAGTGTTTGTAAATATCTAAATGAAAGAACATGTGCGATGATTCCTGAATGATTTAGTTGTTATGCTCCCATTTGTTTAAAGGATGATCATCCACCTCGATAATAATTTTCGATGAATTTTTCATATTATCTATGAATTAAATTTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U578484" ref_strand="+" ref_description="SGN-U578484 Tomato 200607#2 [220 ESTs aligned] (*GB) gi|56562177|emb|CAH60891.1| (e_value=5e-160) carbonic anhydrase [Lycopersicon esculentum]; (*ATH) AT3G01500.3 (e_value=2e-107)  Symbol: None | carbonic anhydrase 1, chloroplast / carbonate dehydratase 1 (CA1), nearly identical to SP:P27140 Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1) (Carbonate dehydratase) {Arabidopsis thaliana} | chr3:194893-197981 REVERSE | Alia... ; (*SWP) sp|P27141|CAHC_TOBAC (e_value=2e-144) Carbonic anhydrase, chloroplastic OS=Nicotiana tabacum; ">
      <seq>gttgaaatgtaaggttcttggcttcttagccatatgatattaaggcaaaagtaagatacaacattgaatctccaacgtacaaacctcatctacaatggattgaagctctcatttgcttagccatcactttcaacattgtctattggattggttatatgtaagagttcaaaagcagcaataatcaagaacacatcactagctatactattactagttagtaacaaagtagtataaagggcaagcaaaagctaaaggaagctcattgagaaatgtcaactgcttccattaacaattgccttactctctcccctgctcaagcttcccttaagaaacctactcgtcccgttgccttcgcaaggcttggcaactcttcttcttcttcttctattccaagtctcatcagaaacgagcccgtctttgctgcccctactcccatcatcaaccccattgtgagagaagaaatggcaaaagaatcctacgatcaagccattgctgcactcgagaaactcctcagcgagaaagcagaacttggaccagttgctgcagcaagagttgaccagatcactgctgaattgaaatcagcagacggcggcaaggcattcgaccctgttgagcacatgaaagctggctttattcatttcaagactgagaaatatgacacaaacccagccttatatggtgagctagcaaagggccagagccctaagttcatggttttcgcgtgctctgactcacgagtctgcccatcccatgtcctcaacttccaacctggtgaggcattcatggttcgtaacatcgccaacatggtccctgcttatgacaaggtcaggtactctggagtaggagcagccattgaatacgccgttcttcatcttaaggtggagaacatcgttgtcattggccacagtgcttgtggaggtatcaaaggtctcatgtcactacctgaagatggtagtgaatcaactgcctttattgaggattgggtaaaaatttgtttacctgccaaggcaaaggttctggccgatcacggagggaaagaatttgcacatcaatgcacagcttgtgagaaggaagctgtgaacgtttcacttggaaatctgcttacgtatccattcgtgagagaaggattggtgaagaaaacattggcattgaagggaggttactatgatttcgtgaagggtggatttgagctgtggggacttgagttcggtctttctcctcctctttccgtatgaacttaattcaattaccatttggccctcacaatttccttcctttttttttttttcgcctgacagtacttttgcttcgcaaaatcaactgtgtgtatgttgtttgtatgtattatgtatgtatgaatcaaatatggaagagcactcgttgttatatttctgaaataaataaaatggagactacttttggtataaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E02.1" temp_strand="+" temp_description="C02HBa0236E02.1  AC215430.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E02 sequenced_by:kribb upload_account_name:korea">
        <position start="14432" stop="18453"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14731" g_stop="15182" g_length="452"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="452" r_length="452" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15183" i_stop="16379" i_length="1197">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16380" g_stop="16441" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="453" r_stop="514" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="16442" i_stop="16813" i_length="372">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="16814" g_stop="16957" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="515" r_stop="658" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="16958" i_stop="17055" i_length="98">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="17056" g_stop="17104" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="659" r_stop="707" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="17105" i_stop="17188" i_length="84">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.961" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="17189" g_stop="17305" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="708" r_stop="824" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="17306" i_stop="17390" i_length="85">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="17391" g_stop="17530" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="825" r_stop="964" r_length="140" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="17531" i_stop="17607" i_length="77">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.948" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="17608" g_stop="17713" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="965" r_stop="1070" r_length="106" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="17714" i_stop="17793" i_length="80">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="17794" g_stop="18150" g_length="357"/>
          <reference_exon_boundary r_type="cDNA" r_start="1071" r_stop="1427" r_length="357" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1428" polyA_stop="1441"/>
      <MATCH_line gen_id="C02HBa0236E02.1" gen_strand="+" ref_id="SGN-U578484" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1427</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U578484" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14731" e_stop="15182"/>
          <exon e_start="16380" e_stop="16441"/>
          <exon e_start="16814" e_stop="16957"/>
          <exon e_start="17056" e_stop="17104"/>
          <exon e_start="17189" e_stop="17305"/>
          <exon e_start="17391" e_stop="17530"/>
          <exon e_start="17608" e_stop="17713"/>
          <exon e_start="17794" e_stop="18150"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGAAATGTAAGGTTCTTGGCTTCTTAGCCATATGATATTAAGGCAAAAGTAAGATACAACATTGAATCTCCAACGTACAAACCTCATCTACAATGGATTGAAGCTCTCATTTGCTTAGCCATCACTTTCAACATTGTCTATTGGATTGGTTATATGTAAGAGTTCAAAAGCAGCAATAATCAAGAACACATCACTAGCTATACTATTACTAGTTAGTAACAAAGTAGTATAAAGGGCAAGCAAAAGCTAAAGGAAGCTCATTGAGAAATGTCAACTGCTTCCATTAACAATTGCCTTACTCTCTCCCCTGCTCAAGCTTCCCTTAAGAAACCTACTCGTCCCGTTGCCTTCGCAAGGCTTGGCAACTCTTCTTCTTCTTCTTCTATTCCAAGTCTCATCAGAAACGAGCCCGTCTTTGCTGCCCCTACTCCCATCATCAACCCCATTGTGGTACGAATTTTTAACTTACATCACTGTATTTTAATCTGTTATAACAAGTTATTTATATTTGACGTTACTTAATTTATTTTTTAAGCAAGACATTTTTTTTGTCTTATCGTATTTTTTGTAACGACTTGTGTCCATGCATGCTAGTTCACGTGAAAATTCAATATTGGCATAGTTCTAAACTTTAGTTTCTAACCACCTTTATTATTGGTATTGTTATTTTTGGCCATGAATCTCCTGAAGTTAGGTGAATTGATCATGTCGCTCTAAATTGTACACGTCTATTGCGTGTACTCAATGACATATAATATATTATTGCAATCCTAAAATAAGTGTTATTTTAATTTATTTTGAACTCATTAAAATAAATATGATATTTTACTGAGTTACTTATATTTATTACTTTGATTTTTTTGAGTACTAATTTGTATTTTGAAACTTTTAAGATGACGAGAGGGTGGAAATAACAAATTAAATTTGAAAATGAACCAAAATAGAGGTGGCAATTAGGTAGAGGTTCTCGCAAAATGAATATTAAATATGTAGGGCCGTATTGTGAATTATGTGGATAATGTTTTTGCTTTCTATTTTTTTTTAAAAAAAATAATTATTACTTACAATAATCCAACGGGTATCCTCGTATGTGCCCATCCTACAAGTGATAAAATGATAAGTACCAGTCTACCATCAAGTTTGTAGGATAGAAACTATTTAGTATACATTGTTTTTGTCTTAATTTCTAGTTTTGGTATCCATCTAAATCGATACTCCATTATGTTAATTATTTCATTTCTTTCTTTTGACATCTACATCACTTTTTAATGTGGTTACCACTTGCTATAATCATACTTCACTTAGCATTTTATTTGAACTTAGTGAAAGTGAAATTTTTCCTAATAATTGGTCTAAAAATTGAAGAAGATTAAAGCCAAGAAATTGAGTTCTTCCTTCTTTCTTCCAACTTTGAAAGTACCGATAGATACTATCATATAAAAAGAAGAGGTGGTCTGACTAACTCAATGAAGTGAATTTTTCAAAAACATGCTCAGAAAAATGAGAAAAATGGAGTTTTTGAAAAGAAAAATTAACAGATATTTAAAGATAAATTTTTGAAATTTGGTTCAAAATTTATGGTCAAATATTAACTTATATTTATATATATACCTCTTCTAAAATGCTAATGAGAATTAGAATTTGCAGAGAGAAGAAATGGCAAAAGAATCCTACGATCAAGCCATTGCTGCACTCGAGAAACTCCTCAGGTTTGTACTCTCTCTACGACTCTACCTTCTAAATCACACTACTTTTTTCTCGATCAAGTGGGGCCCAAAAAATATACATACACCCACACATACGTAGACAAAAAAAATGTTAAAATTTGCGAATATGCAGAGAAAACATAATATAATCATGCAATGTTTACTCGTAAAATTCAATTTCCCGGCAATGAACATGTTACTTGGTTTCGAGTTCTCCAGATCTGCATTAATTTTACCATTCTATCATCATTTTTTTACCCCATATCTGCATTAATTTATCATGGTAATGGTGCTCAAACCACAAATCTTTTTTTTTTCTACCTGAAATATTGCTTCAATAATAATAATGGTCTAAATTATTTTCTGCAATTACAGCGAGAAAGCAGAACTTGGACCAGTTGCTGCAGCAAGAGTTGACCAGATCACTGCTGAATTGAAATCAGCAGACGGCGGCAAGGCATTCGACCCTGTTGAGCACATGAAAGCTGGCTTTATTCATTTCAAGACTGAGAAATATGAGTAAGCAAATTCATTCAAATTAAAATTTCTGCATATTTGATGTTGTAACATTATTAGTGTCTGATAATTTTTCCTGTTTTCTATTTATGTACCAACAGCACAAACCCAGCCTTATATGGTGAGCTAGCAAAGGGCCAGAGCCCTAAGGTACAAATTCCTTGTTAATTTGTTGTCTAATTTTATGATTTGTACGGTTTCTGATGAGTTCTATTGTCCTAAATGTGTAAACAGTTCATGGTTTTCGCGTGCTCTGACTCACGAGTCTGCCCATCCCATGTCCTCAACTTCCAACCTGGTGAGGCATTCATGGTTCGTAACATCGCCAACATGGTCCCTGCTTATGACAAGGTCAGTTACAAATCGATCAACTAGTCGATTATTTCGCTCTGGAATTGTGTTTTTTAAAAATAAAGATGGAATTGAATTTTTACAGGTCAGGTACTCTGGAGTAGGAGCAGCCATTGAATACGCCGTTCTTCATCTTAAGGTGGAGAACATCGTTGTCATTGGCCACAGTGCTTGTGGAGGTATCAAAGGTCTCATGTCACTACCTGAAGATGGTAGTGAATCAACGTACGTCACTCTATAAATCTATTCATTCAAAACACTTATCCTTAACAGATGATTGATTAATAATCTAATATACGCAGTGCCTTTATTGAGGATTGGGTAAAAATTTGTTTACCTGCCAAGGCAAAGGTTCTGGCCGATCACGGAGGGAAAGAATTTGCACATCAATGCACAGCTTGTGAGAAGGTAAAATTCAAATTTAACTTTTTGATTATCAATTAATTACATATATAGCAGTATTTTATAATTGATGAAAAATGTTGCAGGAAGCTGTGAACGTTTCACTTGGAAATCTGCTTACGTATCCATTCGTGAGAGAAGGATTGGTGAAGAAAACATTGGCATTGAAGGGAGGTTACTATGATTTCGTGAAGGGTGGATTTGAGCTGTGGGGACTTGAGTTCGGTCTTTCTCCTCCTCTTTCCGTATGAACTTAATTCAATTACCATTTGGCCCTCACAATTTCCTTCCTTTTTTTTTTTTTCGCCTGACAGTACTTTTGCTTCGCAAAATCAACTGTGTGTATGTTGTTTGTATGTATTATGTATGTATGAATCAAATATGGAAGAGCACTCGTTGTTATATTTCTGAAATAAATAAAATGGAGACTACTTTTTGTATAA</genome_strand>
        <mrna_strand>GTTGAAATGTAAGGTTCTTGGCTTCTTAGCCATATGATATTAAGGCAAAAGTAAGATACAACATTGAATCTCCAACGTACAAACCTCATCTACAATGGATTGAAGCTCTCATTTGCTTAGCCATCACTTTCAACATTGTCTATTGGATTGGTTATATGTAAGAGTTCAAAAGCAGCAATAATCAAGAACACATCACTAGCTATACTATTACTAGTTAGTAACAAAGTAGTATAAAGGGCAAGCAAAAGCTAAAGGAAGCTCATTGAGAAATGTCAACTGCTTCCATTAACAATTGCCTTACTCTCTCCCCTGCTCAAGCTTCCCTTAAGAAACCTACTCGTCCCGTTGCCTTCGCAAGGCTTGGCAACTCTTCTTCTTCTTCTTCTATTCCAAGTCTCATCAGAAACGAGCCCGTCTTTGCTGCCCCTACTCCCATCATCAACCCCATTGTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGAAGAAATGGCAAAAGAATCCTACGATCAAGCCATTGCTGCACTCGAGAAACTCCTCAG....................................................................................................................................................................................................................................................................................................................................................................................CGAGAAAGCAGAACTTGGACCAGTTGCTGCAGCAAGAGTTGACCAGATCACTGCTGAATTGAAATCAGCAGACGGCGGCAAGGCATTCGACCCTGTTGAGCACATGAAAGCTGGCTTTATTCATTTCAAGACTGAGAAATATGA..................................................................................................CACAAACCCAGCCTTATATGGTGAGCTAGCAAAGGGCCAGAGCCCTAAG....................................................................................TTCATGGTTTTCGCGTGCTCTGACTCACGAGTCTGCCCATCCCATGTCCTCAACTTCCAACCTGGTGAGGCATTCATGGTTCGTAACATCGCCAACATGGTCCCTGCTTATGACAAG.....................................................................................GTCAGGTACTCTGGAGTAGGAGCAGCCATTGAATACGCCGTTCTTCATCTTAAGGTGGAGAACATCGTTGTCATTGGCCACAGTGCTTGTGGAGGTATCAAAGGTCTCATGTCACTACCTGAAGATGGTAGTGAATCAAC.............................................................................TGCCTTTATTGAGGATTGGGTAAAAATTTGTTTACCTGCCAAGGCAAAGGTTCTGGCCGATCACGGAGGGAAAGAATTTGCACATCAATGCACAGCTTGTGAGAAG................................................................................GAAGCTGTGAACGTTTCACTTGGAAATCTGCTTACGTATCCATTCGTGAGAGAAGGATTGGTGAAGAAAACATTGGCATTGAAGGGAGGTTACTATGATTTCGTGAAGGGTGGATTTGAGCTGTGGGGACTTGAGTTCGGTCTTTCTCCTCCTCTTTCCGTATGAACTTAATTCAATTACCATTTGGCCCTCACAATTTCCTTCCTTTTTTTTTTTTTCGCCTGACAGTACTTTTGCTTCGCAAAATCAACTGTGTGTATGTTGTTTGTATGTATTATGTATGTATGAATCAAATATGGAAGAGCACTCGTTGTTATATTTCTGAAATAAATAAAATGGAGACTACTTTTGGTATAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U591872" ref_strand="+" ref_description="SGN-U591872 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>gtattactagttagtaacaaagtagtataaagggcaagcaaaagctaaaggaagctcattgagaaatgtcaactgcttccattaacaattgccttactctctcccctgctcaagcttcccttaagaaacctactcgtcccgttgccttcgcagggctggggcactctcttcttcttcttctat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E02.1" temp_strand="+" temp_description="C02HBa0236E02.1  AC215430.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E02 sequenced_by:kribb upload_account_name:korea">
        <position start="14636" stop="15418"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14935" g_stop="15118" g_length="184"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="183" r_length="183" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E02.1" gen_strand="+" ref_id="SGN-U591872" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>184</cumulative_length_of_scored_exons>
        <coverage percentage="1.005" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U591872" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14935" e_stop="15118"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTATTACTAGTTAGTAACAAAGTAGTATAAAGGGCAAGCAAAAGCTAAAGGAAGCTCATTGAGAAATGTCAACTGCTTCCATTAACAATTGCCTTACTCTCTCCCCTGCTCAAGCTTCCCTTAAGAAACCTACTCGTCCCGTTGCCTTCGCAAGGCTTGGCAACTCTTCTTCTTCTTCTTCTAT</genome_strand>
        <mrna_strand>GTATTACTAGTTAGTAACAAAGTAGTATAAAGGGCAAGCAAAAGCTAAAGGAAGCTCATTGAGAAATGTCAACTGCTTCCATTAACAATTGCCTTACTCTCTCCCCTGCTCAAGCTTCCCTTAAGAAACCTACTCGTCCCGTTGCCTTCGCAGGGCTGGGGCACTC-TCTTCTTCTTCTTCTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U579509" ref_strand="+" ref_description="SGN-U579509 Tomato 200607#2 [8 ESTs aligned] (*GB) gi|56562177|emb|CAH60891.1| (e_value=2e-71) carbonic anhydrase [Lycopersicon esculentum]; (*ATH) AT3G01500.3 (e_value=6e-57)  Symbol: None | carbonic anhydrase 1, chloroplast / carbonate dehydratase 1 (CA1), nearly identical to SP:P27140 Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1) (Carbonate dehydratase) {Arabidopsis thaliana} | chr3:194893-197981 REVERSE | Alia... ; (*SWP) sp|P27141|CAHC_TOBAC (e_value=2e-62) Carbonic anhydrase, chloroplastic OS=Nicotiana tabacum; ">
      <seq>gcgtaacatcgccaacatggtccctgcttatgacaaggtcaggtactctggagtaggagcagccattgaatacgccgttcttcatcttaaggtggagaacatcgttgtcattggccacagtgcttgtggaggtatcaaaggtctcatgtcactacctgaagatggtagtgaatcaactgcctttattgaggattgggtaaaaatttgtttacctgccaaggcaaaggttctggccgatcacggagggaaagaatttgcacatcaatgcacagcttgtgagaaggaagctgtgaacgtttcacttggaaatctgcttacgtatccattcgtgagagaaggattggtgaagaaaacattggcattgaagggaggttactatgatttcgtgaagggtggatttgagctgtggggacttgagttcggtctttctcctcctctttccgtatgaacttaattcaattaccatttggccctcacaatttccttcctttttttttttttcccctgacagaacttttgcttcccaaaatcaactgggggaatgttgtttgaatgtattatgtatgtatgaatcaaatatggaaaacccctcgttgttatatttctgaaataaataaaatggaaactactttttgtataaatacttttggggggggctttggtaggaaaaaaatgtggccagtatactgcactggaacctcatgtaaaaacaaaaaaatcttcaaccaacaaaaggattcccaaatttaatctgttattcttgcccaggaaaaccaaaaattggccataataatctacaaacactcttttcggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E02.1" temp_strand="+" temp_description="C02HBa0236E02.1  AC215430.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E02 sequenced_by:kribb upload_account_name:korea">
        <position start="16970" stop="18624"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17269" g_stop="17305" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="37" r_length="37" r_score="0.973"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="17306" i_stop="17390" i_length="85">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="17391" g_stop="17530" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="38" r_stop="177" r_length="140" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="17531" i_stop="17607" i_length="77">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.948" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="17608" g_stop="17713" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="178" r_stop="283" r_length="106" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="17714" i_stop="17793" i_length="80">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="17794" g_stop="18324" g_length="531"/>
          <reference_exon_boundary r_type="cDNA" r_start="284" r_stop="814" r_length="531" r_score="0.944"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E02.1" gen_strand="+" ref_id="SGN-U579509" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>814</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U579509" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17269" e_stop="17305"/>
          <exon e_start="17391" e_stop="17530"/>
          <exon e_start="17608" e_stop="17713"/>
          <exon e_start="17794" e_stop="18324"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGTAACATCGCCAACATGGTCCCTGCTTATGACAAGGTCAGTTACAAATCGATCAACTAGTCGATTATTTCGCTCTGGAATTGTGTTTTTTAAAAATAAAGATGGAATTGAATTTTTACAGGTCAGGTACTCTGGAGTAGGAGCAGCCATTGAATACGCCGTTCTTCATCTTAAGGTGGAGAACATCGTTGTCATTGGCCACAGTGCTTGTGGAGGTATCAAAGGTCTCATGTCACTACCTGAAGATGGTAGTGAATCAACGTACGTCACTCTATAAATCTATTCATTCAAAACACTTATCCTTAACAGATGATTGATTAATAATCTAATATACGCAGTGCCTTTATTGAGGATTGGGTAAAAATTTGTTTACCTGCCAAGGCAAAGGTTCTGGCCGATCACGGAGGGAAAGAATTTGCACATCAATGCACAGCTTGTGAGAAGGTAAAATTCAAATTTAACTTTTTGATTATCAATTAATTACATATATAGCAGTATTTTATAATTGATGAAAAATGTTGCAGGAAGCTGTGAACGTTTCACTTGGAAATCTGCTTACGTATCCATTCGTGAGAGAAGGATTGGTGAAGAAAACATTGGCATTGAAGGGAGGTTACTATGATTTCGTGAAGGGTGGATTTGAGCTGTGGGGACTTGAGTTCGGTCTTTCTCCTCCTCTTTCCGTATGAACTTAATTCAATTACCATTTGGCCCTCACAATTTCCTTCCTTTTTTTTTTTTTCGCCTGACAGTACTTTTGCTTCGCAAAATCAACTGTGTGTATGTTGTTTGTATGTATTATGTATGTATGAATCAAATATGGAAGAGCACTCGTTGTTATATTTCTGAAATAAATAAAATGGAGACTACTTTTTGTATAAATACGTTTGTGGTGGGCTTTGGTAGGTAAAAGATGTGGCCAGTATACTGCACTGGAAGCTCATGTAGAGACAGAGAGATCGTCAAGCAACAAGAGGATTCCCAGATTTAATCTGTTATTCTTGCTCATGTAGACCAAAAATTGGCCATAATAATCTACAAACACTCTTTTCGGC</genome_strand>
        <mrna_strand>GCGTAACATCGCCAACATGGTCCCTGCTTATGACAAG.....................................................................................GTCAGGTACTCTGGAGTAGGAGCAGCCATTGAATACGCCGTTCTTCATCTTAAGGTGGAGAACATCGTTGTCATTGGCCACAGTGCTTGTGGAGGTATCAAAGGTCTCATGTCACTACCTGAAGATGGTAGTGAATCAAC.............................................................................TGCCTTTATTGAGGATTGGGTAAAAATTTGTTTACCTGCCAAGGCAAAGGTTCTGGCCGATCACGGAGGGAAAGAATTTGCACATCAATGCACAGCTTGTGAGAAG................................................................................GAAGCTGTGAACGTTTCACTTGGAAATCTGCTTACGTATCCATTCGTGAGAGAAGGATTGGTGAAGAAAACATTGGCATTGAAGGGAGGTTACTATGATTTCGTGAAGGGTGGATTTGAGCTGTGGGGACTTGAGTTCGGTCTTTCTCCTCCTCTTTCCGTATGAACTTAATTCAATTACCATTTGGCCCTCACAATTTCCTTCCTTTTTTTTTTTTTCCCCTGACAGAACTTTTGCTTCCCAAAATCAACTGGGGGAATGTTGTTTGAATGTATTATGTATGTATGAATCAAATATGGAAAACCCCTCGTTGTTATATTTCTGAAATAAATAAAATGGAAACTACTTTTTGTATAAATACTTTTGGGGGGGGCTTTGGTAGGAAAAAAATGTGGCCAGTATACTGCACTGGAACCTCATGTAAAAACAAAAAAATCTTCAACCAACAAAAGGATTCCCAAATTTAATCTGTTATTCTTGCCCAGGAAAACCAAAAATTGGCCATAATAATCTACAAACACTCTTTTCGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U592465" ref_strand="+" ref_description="SGN-U592465 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|56562177|emb|CAH60891.1| (e_value=2e-19) carbonic anhydrase [Lycopersicon esculentum]; (*ATH) AT3G01500.2 (e_value=1e-20)  Symbol: None | carbonic anhydrase 1, chloroplast / carbonate dehydratase 1 (CA1), nearly identical to SP:P27140 Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1) (Carbonate dehydratase) {Arabidopsis thaliana} | chr3:194740-197981 REVERSE | Alia... ; (*SWP) sp|P27140|CAHC_ARATH (e_value=2e-19) Carbonic anhydrase, chloroplastic OS=Arabidopsis thaliana GN=CA1; ">
      <seq>cgcacatcaatgcacagcttgtgagaaggaagctgtgaacgtttcacttggaaatctgcttacgtatccactcgtgagagaaggattggtgaagaaaacattggcattgaagggaggttactatgatttcgtgatgggtggatttgagctgtggggacttgagttcggtctttctcctcctctttccgtaaaagatgtggccagtatactgcactgggagctcatgtagagacagagagatcgtcaagcacaagaggattcccagatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E02.1" temp_strand="+" temp_description="C02HBa0236E02.1  AC215430.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E02 sequenced_by:kribb upload_account_name:korea">
        <position start="17387" stop="18557"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17686" g_stop="17713" g_length="28"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="28" r_length="28" r_score="0.964"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="17714" i_stop="17793" i_length="80">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="17794" g_stop="17952" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="29" r_stop="187" r_length="159" r_score="0.987"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="17953" i_stop="18175" i_length="223">
            <donor d_prob="0.934" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18176" g_stop="18257" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="188" r_stop="268" r_length="81" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E02.1" gen_strand="+" ref_id="SGN-U592465" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>269</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U592465" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17686" e_stop="17713"/>
          <exon e_start="17794" e_stop="17952"/>
          <exon e_start="18176" e_stop="18257"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCACATCAATGCACAGCTTGTGAGAAGGTAAAATTCAAATTTAACTTTTTGATTATCAATTAATTACATATATAGCAGTATTTTATAATTGATGAAAAATGTTGCAGGAAGCTGTGAACGTTTCACTTGGAAATCTGCTTACGTATCCATTCGTGAGAGAAGGATTGGTGAAGAAAACATTGGCATTGAAGGGAGGTTACTATGATTTCGTGAAGGGTGGATTTGAGCTGTGGGGACTTGAGTTCGGTCTTTCTCCTCCTCTTTCCGTATGAACTTAATTCAATTACCATTTGGCCCTCACAATTTCCTTCCTTTTTTTTTTTTTCGCCTGACAGTACTTTTGCTTCGCAAAATCAACTGTGTGTATGTTGTTTGTATGTATTATGTATGTATGAATCAAATATGGAAGAGCACTCGTTGTTATATTTCTGAAATAAATAAAATGGAGACTACTTTTTGTATAAATACGTTTGTGGTGGGCTTTGGTAGGTAAAAGATGTGGCCAGTATACTGCACTGGAAGCTCATGTAGAGACAGAGAGATCGTCAAGCAACAAGAGGATTCCCAGATT</genome_strand>
        <mrna_strand>CGCACATCAATGCACAGCTTGTGAGAAG................................................................................GAAGCTGTGAACGTTTCACTTGGAAATCTGCTTACGTATCCACTCGTGAGAGAAGGATTGGTGAAGAAAACATTGGCATTGAAGGGAGGTTACTATGATTTCGTGATGGGTGGATTTGAGCTGTGGGGACTTGAGTTCGGTCTTTCTCCTCCTCTTTCC...............................................................................................................................................................................................................................GTAAAAGATGTGGCCAGTATACTGCACTGGGAGCTCATGTAGAGACAGAGAGATCGTCAAGC-ACAAGAGGATTCCCAGATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U563107" ref_strand="+" ref_description="SGN-U563107 Tomato 200607#2 [7 ESTs aligned] (*GB) gi|157352560|emb|CAO43666.1| (e_value=1e-53) unnamed; (*ATH) AT3G27925.1 (e_value=2e-50) | Symbol: None | DegP protease, putative, SP:022609; almost identical to DegP protease precursor GB:AF028842 from (Arabidopsis thaliana) (J. Biol. Chem. 273 (12), 7094-7098 (1998)) | chr3:10367747-10370101 REVERSE | Aliases: K24A2.12; (*SWP) sp|O22609|DEGP1_ARATH (e_value=2e-49) Protease Do-like 1, chloroplastic OS=Arabidopsis thaliana GN=DEGP1; ">
      <seq>gggtcttcctctttgctctcaccagttgtcttcttaacaatggctgcatcttcacactccctagcttcttctgcttgcttctccacaactccggcacggaaattttccggctcagatcgatttcaacttgctaagtctttactctgccggaaaatacctggtttctccggcagtgtggtctgcgctcggcgtatttgctctaactatgcctcttccggtgaccagtccaactacgggaagaagcttatggatagtatttttgtggcatgcacttccgttgccttgtctttctctctctatatagcagacgttgaccctgcctcggcttttgtagtcacttcacccaggaaattgcagactgatgaacttgctactgttcgtctcttccaagagaatacaccttccgttgtgtatattactaatcttgcttccaggcaggatatgttcacactggatgtatttgaggtgcctcaagggtctgggtcaggcttcgtctgggataaaaatggaaatattgttactaattatcatgtgattcgaggtgcttctgatctcagagtgactcttgctgatcaaactacttatgatgcaaaagttgttggattttcaattccagttgatactgtcagtggcattgttgatcagttagtgcagtttgggaaagtcacaaggccaattttgggcataaagtttgcacctgatcagtccgttgagcaactgggagtcactggagtacttgtcctggatgctcctccaaatggtcctgcaggcaaagcaggtcttctacctactaaacgtgattcctacggaagacttattttaggtgatataatcacatctataaatggaaagaaggtctctaatgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E02.1" temp_strand="+" temp_description="C02HBa0236E02.1  AC215430.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E02 sequenced_by:kribb upload_account_name:korea">
        <position start="20171" stop="23986"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20471" g_stop="20904" g_length="434"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="434" r_length="434" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20905" i_stop="21087" i_length="183">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="21088" g_stop="21210" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="435" r_stop="557" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="21211" i_stop="21517" i_length="307">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="21518" g_stop="21555" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="558" r_stop="595" r_length="38" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="21556" i_stop="23033" i_length="1478">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.463" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="23034" g_stop="23062" g_length="29"/>
          <reference_exon_boundary r_type="cDNA" r_start="596" r_stop="624" r_length="29" r_score="0.966"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="23063" i_stop="23244" i_length="182">
            <donor d_prob="0.996" d_score="0.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="23245" g_stop="23397" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="625" r_stop="777" r_length="153" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="23398" i_stop="23597" i_length="200">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.908" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="23598" g_stop="23686" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="778" r_stop="866" r_length="89" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E02.1" gen_strand="+" ref_id="SGN-U563107" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>866</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U563107" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20471" e_stop="20904"/>
          <exon e_start="21088" e_stop="21210"/>
          <exon e_start="21518" e_stop="21555"/>
          <exon e_start="23034" e_stop="23062"/>
          <exon e_start="23245" e_stop="23397"/>
          <exon e_start="23598" e_stop="23686"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGTCTTCCTCTTTGCTCTCACCAGTTGTCTTCTTAACAATGGCTGCATCTTCACACTCCCTAGCTTCTTCTGCTTGCTTCTCCACAACTCCGGCACGGAAATTTTCCGGCTCAGATCGATTTCAACTTGCTAAGTCTTTACTCTGCCGGAAAATACCTGGTTTCTCCGGCAGTGTGGTCTGCGCTCGGCGTATTTGCTCTAACTATGCCTCTTCCGGTGACCAGTCCAACTACGGGAAGAAGCTTATGGATAGTATTTTTGTGGCATGCACTTCCGTTGCCTTGTCTTTCTCTCTCTATATAGCAGACGTTGACCCTGCCTCGGCTTTTGTAGTCACTTCACCCAGGAAATTGCAGACTGATGAACTTGCTACTGTTCGTCTCTTCCAAGAGAATACACCTTCCGTTGTGTATATTACTAATCTTGCTTCCAGGTGATCTATCAATGAGGATGGTCCTTTTTTTTTTTTCCTTATATGTTAGTAATTCACGTGCATTTGAGTTTGTAGATATAGTGCTAGATGAAAGTCTGCTAGATGTATTTCCTGTTATTGTAATTGCCGTCCACCTTTGTTTTTCCGGTTTGGTTAATTTGGATTCCGTTTGTGATATAATAGGCAGGATATGTTCACACTGGATGTATTTGAGGTGCCTCAAGGGTCTGGGTCAGGCTTCGTCTGGGATAAAAATGGAAATATTGTTACTAATTATCATGTGATTCGAGGTGCTTCTGATCTCAGGTGAGTTAATTGGCAACTGGAAACACATTTTTCTGATTTAAACAAGTTTCTATTTATTAGTATCTGCCTAAATGATTTCAGTTTCAAGTTCCTTGCCACAGTCCTCATATTATTTCTATATGCTATCTGACTGCTCTTATACTAGCATGATTCTACAACTTCGATTGTCTTAGCTAATCGTGGAGTATTAGGAAACCTGCAATTTTTTTCATGATATGAATTTGTTTGGATTGAACAGTCTGTTAGTTGCTTAATTATGGTTTTACGCTCTAATTGCTAGTACTAATATAGTCTTAGTCTTGCTCAGAGTGACTCTTGCTGATCAAACTACTTATGATGCAAAAGTTGTTGGATTTGACCAAGATAAAGATGTTGCTGTGTTGCATATTGATGCACCAAAAGACAAGTTGCGACCTATACCAATTGGCGTATCGGCAGACTTGCTCGTTGGTCAAAAAGTATTTGCTATTGGAAATCCAGTATGTGACGAAATACAAACCTGCTAGAGAATTCTGTTCATGTAATAATAGTACTTTTATCTGCTCTGTTGTCCCTTCTCTAAACCTAGTTTGAGCCATTCTATATTCAGCTTTCGCTTTAGAGGAAAACTATCGTCTTGCAGGCGTTCATGAGCATTACAACAATTAGAAAGTATTAATTTGCATATAGAATGCTAGTGCATTTTGTTATCAATAAAATTTGTGCAAGTAAGGAAAAAAACCAACTGACAGCGAGTAAGGAAAAAAAACAACTGATAGCAAGTACAACTTAGTTCAGTCTTCTGGTTCAACTGCTTGCTTGTAAGCGCACCTTCTTCTCCAGCTAAAGAATCAGTATCTGAAAGTTGGCTGTTACTTCTGAACATTCATCGCCTGCTAATATTTTTAACTGCTTCTTTTCCCATTAGTTTAAAGCATAACAATTCCCCCCCTGTAGTGCTCCAACTTCTGCCAAAATGTGTCACTGACTTGCACTTAAATCAAATTACTTTTTAAGGGCCCTAAAACAATTGTTGACTTACACATTGAAAATCTCTTGTTGCAATGAGTATATGTTTCTTGTGTTTAGGTACCCCACCACTTCACACCTCTTTTTCCTCTTTATTCATATAAATTTACTATAAAACATGAATATTTTACTTCTCTTTTATGTTTCATATGTTAAACACATGATGAATGATTTATAATGTAAATATCTTTGCAGTTTGGACTTGATCATACACTCACCACTGGTGTAATCAGGTATTTAGACATTTCATTTATGGTGTGCAGGTTCCTAATGTTCAGATATTCCAGTGAAATGGTGTTAACTATGTTTCTGTGAAGATAGGAGATGAAATAAATGAATCTAGCCACTCAAAGTCGTGGTAAAAATGACGTTAACTTCTTCCATTGTTTAAAACGGAGATGAAGTAGAGAATTTTGTTTAATCTTTTCCGTGTATTCAACTGTAAGACTAGCCTTGTGATGTTGACGTGGTTGTCACTGTTGAGTGCCTTGCACCCATAAATTCCAAGAAGCAAACATAAATACTAACCATATGTCATGGTAAATGGATACATATGCATAAGCAAGCTGTGTTGGATATGGATTAACTTAATGCTATGGATCATGCATATTCTTTAACATCACTGATCAATTTATATGTTTCTAGTGGGCTTAGGAGAGAAATCAATTCTGCGGCTACTGGCCGCCCAATCCAAGATGTTATTCAGACAGATGCAGCAATCAATCCTGGTAACAGTGGAGGGCCACTTCTAGATAGTTCTGGAAATCTTATTGGAATAAATACTGCTATATATTCTCCTTCCGGTGCATCATCAGGTGTTGGATTTTCAATTCCAGTTGATACTGTAAGTTGTTATTTGTCTTTCAGAATTTTATTATTTGCAATGCTGATTGAAACTTTTAGGTTAAACATACTTCCCCATATAAAGCAAACTGATTTATTACACCCTGTGGTTCAGAAAGTTGCCCTTGCTTCTACTACGATGTGGTAGTCTCTCCCTGATGATTTTGATTTTTACCTATTCAGGTCAGTGGCATTGTTGATCAGTTAGTGCAGTTTGGGAAAGTCACAAGGCCAATTTTGGGCATAAAGTTTGCACCTGATCAGTCCGTTGAGCAACTGGGAGTCACTGGAGTACTTGTCCTGGATGCTCCTCCAAATGGTCCTGCAGGCAAAGCAGTATGTTATTTCCTGTATCTTTTCTCTTGACATTCCTTACCAGTTTCTCCTTCCTTTTATACACTATAATTATCAGCAGTTTCCACCAGTTATATCACCCTACCGATTTTCTTTCATGTGATTGTTTGTACAAGCCAGTATAAATTTGTGACCGACATGATGAGAAACCGAATATGAGATGTTAAATCTTGTAAATGCAGGGTCTTCTACCTACTAAACGTGATTCCTACGGAAGACTTATTTTAGGTGATATAATCACATCTATAAATGGAAAGAAGGTCTCTAATGG</genome_strand>
        <mrna_strand>GGGTCTTCCTCTTTGCTCTCACCAGTTGTCTTCTTAACAATGGCTGCATCTTCACACTCCCTAGCTTCTTCTGCTTGCTTCTCCACAACTCCGGCACGGAAATTTTCCGGCTCAGATCGATTTCAACTTGCTAAGTCTTTACTCTGCCGGAAAATACCTGGTTTCTCCGGCAGTGTGGTCTGCGCTCGGCGTATTTGCTCTAACTATGCCTCTTCCGGTGACCAGTCCAACTACGGGAAGAAGCTTATGGATAGTATTTTTGTGGCATGCACTTCCGTTGCCTTGTCTTTCTCTCTCTATATAGCAGACGTTGACCCTGCCTCGGCTTTTGTAGTCACTTCACCCAGGAAATTGCAGACTGATGAACTTGCTACTGTTCGTCTCTTCCAAGAGAATACACCTTCCGTTGTGTATATTACTAATCTTGCTTCCAG.......................................................................................................................................................................................GCAGGATATGTTCACACTGGATGTATTTGAGGTGCCTCAAGGGTCTGGGTCAGGCTTCGTCTGGGATAAAAATGGAAATATTGTTACTAATTATCATGTGATTCGAGGTGCTTCTGATCTCAG...................................................................................................................................................................................................................................................................................................................AGTGACTCTTGCTGATCAAACTACTTATGATGCAAAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTTGGATTTTCAATTCCAGTTGATACT......................................................................................................................................................................................GTCAGTGGCATTGTTGATCAGTTAGTGCAGTTTGGGAAAGTCACAAGGCCAATTTTGGGCATAAAGTTTGCACCTGATCAGTCCGTTGAGCAACTGGGAGTCACTGGAGTACTTGTCCTGGATGCTCCTCCAAATGGTCCTGCAGGCAAAGCA........................................................................................................................................................................................................GGTCTTCTACCTACTAAACGTGATTCCTACGGAAGACTTATTTTAGGTGATATAATCACATCTATAAATGGAAAGAAGGTCTCTAATGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U563106" ref_strand="+" ref_description="SGN-U563106 Tomato 200607#2 [14 ESTs aligned] (*GB) gi|157352560|emb|CAO43666.1| (e_value=0) unnamed; (*ATH) AT3G27925.1 (e_value=1e-176) | Symbol: None | DegP protease, putative, SP:022609; almost identical to DegP protease precursor GB:AF028842 from (Arabidopsis thaliana) (J. Biol. Chem. 273 (12), 7094-7098 (1998)) | chr3:10367747-10370101 REVERSE | Aliases: K24A2.12; (*SWP) sp|O22609|DEGP1_ARATH (e_value=1e-175) Protease Do-like 1, chloroplastic OS=Arabidopsis thaliana GN=DEGP1; ">
      <seq>gttcctctttgctctcaccagttgtcttcttaacaatggctgcatcttcacactccctagcttcttctgcttgcttctccacaactccggcacggaaattttccggctcagatcgatttcaacttgctaagtctttactctgccggaaaatacctggtttctccggcagtgtggtctgcgctcggcgtatttgctctaactatgcctcttccggtgaccagtccaactacgggaagaagcttatggatagtatttttgtggcatgcacttccgttgccttgtctttctctctctatatagcagacgttgaccctgcctcggcttttgtagtcacttcacccaggaaattgcagactgatgaacttgctactgttcgtctcttccaagagaatacaccttccgttgtgtatattactaatcttgcttccaggcaggatatgttcacactggatgtatttgaggtgcctcaagggtctgggtcaggcttcgtctgggataaaaatggaaatattgttactaattatcatgtgattcgaggtgcttctgatctcagagtgactcttgctgatcaaactacttatgatgcaaaagttgttggatttgaccaagataaagatgttgctgtgttgcatattgatgcaccaaaagacaagttgcgacctataccaattggcgtatcggcagacttgctcgttggtcaaaaagtatttgctattggaaatccatttggacttgatcatacactcaccactggtgtaatcagtgggcttaggagagaaatcaattctgcggctactggccgcccaatccaagatgttattcagacagatgcagcaatcaatcctggtaacagtggagggccacttctagatagttctggaaatcttattggaataaatactgctatatattctccttccggtgcatcatcaggtgttggattttcaattccagttgatactgtcagtggcattgttgatcagttagtgcagtttgggaaagtcacaaggccaattttgggcataaagtttgcacctgatcagtccgttgagcaactgggagtcactggagtacttgtcctggatgctcctccaaatggtcctgcaggcaaagcaggtcttctacctactaaacgtgattcctacggaagacttattttaggtgatataatcacatctataaatggaaagaaggtctctaatggcaccgacttgtacagaattcttgaccaatgcaaagttggagaaaaggtaattgtggaagtgctgcgtggggatcagaaagagaagatcccctgtacttcctggaacccaaagcctgaagaatcgtagttcctcaaatggatagagtatgtgttgatatgcatttcttggcgaacaagcccatattattagtgcatcaattgttgaatggttgtgtatatacaaaacaacgcttaaaactagggtgcaagcaatatagttgggagtctaacactgctgcctaaatatttctactatattagatatcctcaaattgtataaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E02.1" temp_strand="+" temp_description="C02HBa0236E02.1  AC215430.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E02 sequenced_by:kribb upload_account_name:korea">
        <position start="20176" stop="24758"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20475" g_stop="20904" g_length="430"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="430" r_length="430" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20905" i_stop="21087" i_length="183">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="21088" g_stop="21210" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="431" r_stop="553" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="21211" i_stop="21517" i_length="307">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="21518" g_stop="21689" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="554" r_stop="725" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="21690" i_stop="22413" i_length="724">
            <donor d_prob="0.928" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="22414" g_stop="22451" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="726" r_stop="763" r_length="38" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="22452" i_stop="22863" i_length="412">
            <donor d_prob="0.968" d_score="0.00"/>
            <acceptor a_prob="0.886" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="22864" g_stop="23062" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="764" r_stop="962" r_length="199" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="23063" i_stop="23244" i_length="182">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="23245" g_stop="23397" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="963" r_stop="1115" r_length="153" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="23398" i_stop="23597" i_length="200">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.908" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="23598" g_stop="23732" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="1116" r_stop="1250" r_length="135" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="23733" i_stop="24188" i_length="456">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="24189" g_stop="24461" g_length="273"/>
          <reference_exon_boundary r_type="cDNA" r_start="1251" r_stop="1526" r_length="276" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E02.1" gen_strand="+" ref_id="SGN-U563106" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>1523</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U563106" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20475" e_stop="20904"/>
          <exon e_start="21088" e_stop="21210"/>
          <exon e_start="21518" e_stop="21689"/>
          <exon e_start="22414" e_stop="22451"/>
          <exon e_start="22864" e_stop="23062"/>
          <exon e_start="23245" e_stop="23397"/>
          <exon e_start="23598" e_stop="23732"/>
          <exon e_start="24189" e_stop="24461"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCCTCTTTGCTCTCACCAGTTGTCTTCTTAACAATGGCTGCATCTTCACACTCCCTAGCTTCTTCTGCTTGCTTCTCCACAACTCCGGCACGGAAATTTTCCGGCTCAGATCGATTTCAACTTGCTAAGTCTTTACTCTGCCGGAAAATACCTGGTTTCTCCGGCAGTGTGGTCTGCGCTCGGCGTATTTGCTCTAACTATGCCTCTTCCGGTGACCAGTCCAACTACGGGAAGAAGCTTATGGATAGTATTTTTGTGGCATGCACTTCCGTTGCCTTGTCTTTCTCTCTCTATATAGCAGACGTTGACCCTGCCTCGGCTTTTGTAGTCACTTCACCCAGGAAATTGCAGACTGATGAACTTGCTACTGTTCGTCTCTTCCAAGAGAATACACCTTCCGTTGTGTATATTACTAATCTTGCTTCCAGGTGATCTATCAATGAGGATGGTCCTTTTTTTTTTTTCCTTATATGTTAGTAATTCACGTGCATTTGAGTTTGTAGATATAGTGCTAGATGAAAGTCTGCTAGATGTATTTCCTGTTATTGTAATTGCCGTCCACCTTTGTTTTTCCGGTTTGGTTAATTTGGATTCCGTTTGTGATATAATAGGCAGGATATGTTCACACTGGATGTATTTGAGGTGCCTCAAGGGTCTGGGTCAGGCTTCGTCTGGGATAAAAATGGAAATATTGTTACTAATTATCATGTGATTCGAGGTGCTTCTGATCTCAGGTGAGTTAATTGGCAACTGGAAACACATTTTTCTGATTTAAACAAGTTTCTATTTATTAGTATCTGCCTAAATGATTTCAGTTTCAAGTTCCTTGCCACAGTCCTCATATTATTTCTATATGCTATCTGACTGCTCTTATACTAGCATGATTCTACAACTTCGATTGTCTTAGCTAATCGTGGAGTATTAGGAAACCTGCAATTTTTTTCATGATATGAATTTGTTTGGATTGAACAGTCTGTTAGTTGCTTAATTATGGTTTTACGCTCTAATTGCTAGTACTAATATAGTCTTAGTCTTGCTCAGAGTGACTCTTGCTGATCAAACTACTTATGATGCAAAAGTTGTTGGATTTGACCAAGATAAAGATGTTGCTGTGTTGCATATTGATGCACCAAAAGACAAGTTGCGACCTATACCAATTGGCGTATCGGCAGACTTGCTCGTTGGTCAAAAAGTATTTGCTATTGGAAATCCAGTATGTGACGAAATACAAACCTGCTAGAGAATTCTGTTCATGTAATAATAGTACTTTTATCTGCTCTGTTGTCCCTTCTCTAAACCTAGTTTGAGCCATTCTATATTCAGCTTTCGCTTTAGAGGAAAACTATCGTCTTGCAGGCGTTCATGAGCATTACAACAATTAGAAAGTATTAATTTGCATATAGAATGCTAGTGCATTTTGTTATCAATAAAATTTGTGCAAGTAAGGAAAAAAACCAACTGACAGCGAGTAAGGAAAAAAAACAACTGATAGCAAGTACAACTTAGTTCAGTCTTCTGGTTCAACTGCTTGCTTGTAAGCGCACCTTCTTCTCCAGCTAAAGAATCAGTATCTGAAAGTTGGCTGTTACTTCTGAACATTCATCGCCTGCTAATATTTTTAACTGCTTCTTTTCCCATTAGTTTAAAGCATAACAATTCCCCCCCTGTAGTGCTCCAACTTCTGCCAAAATGTGTCACTGACTTGCACTTAAATCAAATTACTTTTTAAGGGCCCTAAAACAATTGTTGACTTACACATTGAAAATCTCTTGTTGCAATGAGTATATGTTTCTTGTGTTTAGGTACCCCACCACTTCACACCTCTTTTTCCTCTTTATTCATATAAATTTACTATAAAACATGAATATTTTACTTCTCTTTTATGTTTCATATGTTAAACACATGATGAATGATTTATAATGTAAATATCTTTGCAGTTTGGACTTGATCATACACTCACCACTGGTGTAATCAGGTATTTAGACATTTCATTTATGGTGTGCAGGTTCCTAATGTTCAGATATTCCAGTGAAATGGTGTTAACTATGTTTCTGTGAAGATAGGAGATGAAATAAATGAATCTAGCCACTCAAAGTCGTGGTAAAAATGACGTTAACTTCTTCCATTGTTTAAAACGGAGATGAAGTAGAGAATTTTGTTTAATCTTTTCCGTGTATTCAACTGTAAGACTAGCCTTGTGATGTTGACGTGGTTGTCACTGTTGAGTGCCTTGCACCCATAAATTCCAAGAAGCAAACATAAATACTAACCATATGTCATGGTAAATGGATACATATGCATAAGCAAGCTGTGTTGGATATGGATTAACTTAATGCTATGGATCATGCATATTCTTTAACATCACTGATCAATTTATATGTTTCTAGTGGGCTTAGGAGAGAAATCAATTCTGCGGCTACTGGCCGCCCAATCCAAGATGTTATTCAGACAGATGCAGCAATCAATCCTGGTAACAGTGGAGGGCCACTTCTAGATAGTTCTGGAAATCTTATTGGAATAAATACTGCTATATATTCTCCTTCCGGTGCATCATCAGGTGTTGGATTTTCAATTCCAGTTGATACTGTAAGTTGTTATTTGTCTTTCAGAATTTTATTATTTGCAATGCTGATTGAAACTTTTAGGTTAAACATACTTCCCCATATAAAGCAAACTGATTTATTACACCCTGTGGTTCAGAAAGTTGCCCTTGCTTCTACTACGATGTGGTAGTCTCTCCCTGATGATTTTGATTTTTACCTATTCAGGTCAGTGGCATTGTTGATCAGTTAGTGCAGTTTGGGAAAGTCACAAGGCCAATTTTGGGCATAAAGTTTGCACCTGATCAGTCCGTTGAGCAACTGGGAGTCACTGGAGTACTTGTCCTGGATGCTCCTCCAAATGGTCCTGCAGGCAAAGCAGTATGTTATTTCCTGTATCTTTTCTCTTGACATTCCTTACCAGTTTCTCCTTCCTTTTATACACTATAATTATCAGCAGTTTCCACCAGTTATATCACCCTACCGATTTTCTTTCATGTGATTGTTTGTACAAGCCAGTATAAATTTGTGACCGACATGATGAGAAACCGAATATGAGATGTTAAATCTTGTAAATGCAGGGTCTTCTACCTACTAAACGTGATTCCTACGGAAGACTTATTTTAGGTGATATAATCACATCTATAAATGGAAAGAAGGTCTCTAATGGCACCGACTTGTACAGAATTCTTGACCAATGCAAAGTTGGAGAAAAGGTAATTCTCATACATCTATTACAAAAATTTTCATCTATATTGTTGGCTTAGAATTCATATGGAGTACAGAGAATTTCTCAAGCATACACCAACTCGCAACGCTTTTAGATAAACATCATATTTGGAATTGCACCTTTGCTTGCATGAAACTTTATTAGTTGATCTTCCTTTTTATTTCTGCAACTTTATTTAAGTGGTCTTTAAGAATATGAATAGTTAGGTATTTGACCTTGATATTGACAGTAGTAATGTTTCTCTTATCAATCTTGCTAAATATTTTGTTTTCCCCAAGTTTGTATACTTGCACATACTTTTTCATTAACATTTCCATTAGCTTTTCTCCTTCCAGTAATTATGAGATAATTGGAAAGTATTCAGTATGAAAAGGTAGTGAAACTTGGAACTACATTTGTGGAAATTGTAGAAAGCTAAGCTTACGGCTGATGTTATGAACAGGTAATTGTGGAAGTGCTGCGTGGGGATCAGAAAGAGAAGAT-CCCTGTACTT-CTGGAA-CCAAAGCCTGAAGAATCGTAGTTCCTCAAATGGATAGAGTATGTGTTGATATGCATTTCTTGGCGAACAAGCCCATATTATTAGTGCATCAATTGTTGAATGGTTGTGTATATACAAAACAACGCTTAAAACTAGGGTGCAAGCAATATAGTTGGGAGTCTAACACTGCTGCCTAAATATTTCTACTATATTAGATATCCTCAAATTGTATAATGT</genome_strand>
        <mrna_strand>GTTCCTCTTTGCTCTCACCAGTTGTCTTCTTAACAATGGCTGCATCTTCACACTCCCTAGCTTCTTCTGCTTGCTTCTCCACAACTCCGGCACGGAAATTTTCCGGCTCAGATCGATTTCAACTTGCTAAGTCTTTACTCTGCCGGAAAATACCTGGTTTCTCCGGCAGTGTGGTCTGCGCTCGGCGTATTTGCTCTAACTATGCCTCTTCCGGTGACCAGTCCAACTACGGGAAGAAGCTTATGGATAGTATTTTTGTGGCATGCACTTCCGTTGCCTTGTCTTTCTCTCTCTATATAGCAGACGTTGACCCTGCCTCGGCTTTTGTAGTCACTTCACCCAGGAAATTGCAGACTGATGAACTTGCTACTGTTCGTCTCTTCCAAGAGAATACACCTTCCGTTGTGTATATTACTAATCTTGCTTCCAG.......................................................................................................................................................................................GCAGGATATGTTCACACTGGATGTATTTGAGGTGCCTCAAGGGTCTGGGTCAGGCTTCGTCTGGGATAAAAATGGAAATATTGTTACTAATTATCATGTGATTCGAGGTGCTTCTGATCTCAG...................................................................................................................................................................................................................................................................................................................AGTGACTCTTGCTGATCAAACTACTTATGATGCAAAAGTTGTTGGATTTGACCAAGATAAAGATGTTGCTGTGTTGCATATTGATGCACCAAAAGACAAGTTGCGACCTATACCAATTGGCGTATCGGCAGACTTGCTCGTTGGTCAAAAAGTATTTGCTATTGGAAATCCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGACTTGATCATACACTCACCACTGGTGTAATCAG............................................................................................................................................................................................................................................................................................................................................................................................................................TGGGCTTAGGAGAGAAATCAATTCTGCGGCTACTGGCCGCCCAATCCAAGATGTTATTCAGACAGATGCAGCAATCAATCCTGGTAACAGTGGAGGGCCACTTCTAGATAGTTCTGGAAATCTTATTGGAATAAATACTGCTATATATTCTCCTTCCGGTGCATCATCAGGTGTTGGATTTTCAATTCCAGTTGATACT......................................................................................................................................................................................GTCAGTGGCATTGTTGATCAGTTAGTGCAGTTTGGGAAAGTCACAAGGCCAATTTTGGGCATAAAGTTTGCACCTGATCAGTCCGTTGAGCAACTGGGAGTCACTGGAGTACTTGTCCTGGATGCTCCTCCAAATGGTCCTGCAGGCAAAGCA........................................................................................................................................................................................................GGTCTTCTACCTACTAAACGTGATTCCTACGGAAGACTTATTTTAGGTGATATAATCACATCTATAAATGGAAAGAAGGTCTCTAATGGCACCGACTTGTACAGAATTCTTGACCAATGCAAAGTTGGAGAAAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAATTGTGGAAGTGCTGCGTGGGGATCAGAAAGAGAAGATCCCCTGTACTTCCTGGAACCCAAAGCCTGAAGAATCGTAGTTCCTCAAATGGATAGAGTATGTGTTGATATGCATTTCTTGGCGAACAAGCCCATATTATTAGTGCATCAATTGTTGAATGGTTGTGTATATACAAAACAACGCTTAAAACTAGGGTGCAAGCAATATAGTTGGGAGTCTAACACTGCTGCCTAAATATTTCTACTATATTAGATATCCTCAAATTGTATAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U571618" ref_strand="+" ref_description="SGN-U571618 Tomato 200607#2 [5 ESTs aligned] ">
      <seq>cgaaagtggaaaccgccaaaactatcattatcgcagagacctcatctttcaacttccattcattattctattttccgtttcactccattttcatacacccaatcccatttttgtagcagcagtgttctgtttcttcttcatggaattgaatcataccaagcagactctgcaaacggctatggagaatgaacagcagcatctctccctctctgaatcagattctactgattctgaacctgagaaagctattactttctcctccccagctcgttttcatagcggctccgattctgatcattccactaagttccaaacagataaagctactaatccctctaccgtcaatggcgattctactaaggcgcaatctcagccgaggtcatcaatttcctccgattcagatgattttagtaagtgtggagaacataaagttagtaagattgattctactactgctactgttaatagagattctacagctactaaagtatcttcaccgccggtggaatctccgccgaggtcgtcaatttcctctgatcaaatttctcttcctcatgagtccttaaatatggaggatactaagccttctgcagctccgacggggagtccgccggaaaaacctccaataccggaagcggtggtgaagaagtttatcaaggaggagccactggctttggtgaaagcggatctgtttgtcggagatggtacagctagtattaaggaaggtgaagacagcggcaaccgtcggcagataggaaagacac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E02.1" temp_strand="-" temp_description="C02HBa0236E02.1  AC215430.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E02 sequenced_by:kribb upload_account_name:korea">
        <position start="47289" stop="45926"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46989" g_stop="46226" g_length="764"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="764" r_length="764" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E02.1" gen_strand="-" ref_id="SGN-U571618" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>764</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U571618" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46989" e_stop="46226"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAAAGTGGAAACCGCCAAAACTATCATTATCGCAGAGACCTCATCTTTCAACTTCCATTCATTATTCTATTTTCCGTTTCACTCCATTTTCATACACCCAATCCCATTTTTGTAGCAGCAGTGTTCTGTTTCTTCTTCATGGAATTGAATCATACCAAGCAGACTCTGCAAACGGCTATGGAGAATGAACAGCAGCATCTCTCCCTCTCTGAATCAGATTCTACTGATTCTGAACCTGAGAAAGCTATTACTTTCTCCTCCCCAGCTCGTTTTCATAGCGGCTCCGATTCTGATCATTCCACTAAGTTCCAAACAGATAAAGCTACTAATCCCTCTACCGTCAATGGCGATTCTACTAAGGCGCAATCTCAGCCGAGGTCATCAATTTCCTCCGATTCAGATGATTTTAGTAAGTGTGGAGAACATAAAGTTAGTAAGATTGATTCTACTACTGCTACTGTTAATAGAGATTCTACAGCTACTAAAGTATCTTCACCGCCGGTGGAATCTCCGCCGAGGTCGTCAATTTCCTCTGATCAAATTTCTCTTCCTCATGAGTCCTTAAATATGGAGGATACTAAGCCTTCTGCAGCTCCGACGGGGAGTCCGCCGGAAAAACCTCCAATACCGGAAGCGGTGGTGAAGAAGTTTATCAAGGAGGAGCCACTGGCTTTGGTGAAAGCGGATCTGTTTGTCGGAGATGGTACAGCTAGTATTAAGGAAGGTGAAGACAGCGGCAACCGTCGGCAGAGAGGAAAGCCAC</genome_strand>
        <mrna_strand>CGAAAGTGGAAACCGCCAAAACTATCATTATCGCAGAGACCTCATCTTTCAACTTCCATTCATTATTCTATTTTCCGTTTCACTCCATTTTCATACACCCAATCCCATTTTTGTAGCAGCAGTGTTCTGTTTCTTCTTCATGGAATTGAATCATACCAAGCAGACTCTGCAAACGGCTATGGAGAATGAACAGCAGCATCTCTCCCTCTCTGAATCAGATTCTACTGATTCTGAACCTGAGAAAGCTATTACTTTCTCCTCCCCAGCTCGTTTTCATAGCGGCTCCGATTCTGATCATTCCACTAAGTTCCAAACAGATAAAGCTACTAATCCCTCTACCGTCAATGGCGATTCTACTAAGGCGCAATCTCAGCCGAGGTCATCAATTTCCTCCGATTCAGATGATTTTAGTAAGTGTGGAGAACATAAAGTTAGTAAGATTGATTCTACTACTGCTACTGTTAATAGAGATTCTACAGCTACTAAAGTATCTTCACCGCCGGTGGAATCTCCGCCGAGGTCGTCAATTTCCTCTGATCAAATTTCTCTTCCTCATGAGTCCTTAAATATGGAGGATACTAAGCCTTCTGCAGCTCCGACGGGGAGTCCGCCGGAAAAACCTCCAATACCGGAAGCGGTGGTGAAGAAGTTTATCAAGGAGGAGCCACTGGCTTTGGTGAAAGCGGATCTGTTTGTCGGAGATGGTACAGCTAGTATTAAGGAAGGTGAAGACAGCGGCAACCGTCGGCAGATAGGAAAGACAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U576956" ref_strand="+" ref_description="SGN-U576956 Tomato 200607#2 [12 ESTs aligned] (*GB) gi|2182815|gb|AAB69757.1| (e_value=0) farnesyl-protein transferase beta subunit [Lycopersicon esculentum]; (*ATH) AT5G40280.1 (e_value=1e-137) | Symbol: None | protein farnesyltransferase beta subunit (ERA1), identical to GI:8347240 (SWISS-PROT:Q38920); WIGGUM mutant | chr5:16118619-16122189 FORWARD | Aliases: MSN9.180, MSN9_180; (*SWP) sp|Q04903|FNTB_PEA (e_value=5e-139) Protein farnesyltransferase subunit beta OS=Pisum sativum GN=FTB; ">
      <seq>gtaaacgagcgttgatttgtcgctgacgaaatttacagtcaagagtagtaaccggttgtagtgaaaaaatggagtcgaggaaagtgacgaagacgctggaagatcaatgggtggtggagcgtcgagtccgagagatatacgattatttctacagcatttcccccaactctccgtccgacctcatagagatcgaacgtgacaaacacttcggttatctaagccaaggtctcagaaaacttggtccgtcgttttccgttttggatgccagtcgaccatggctttgctactggacacttcattcaatcgctttgttgggagaatctattggtggcaaactggaaaatgatgcaattgactttctgacccgttgccaggataaagatggtggctatggaggtggacctggtcagatgcctcatcttgcaactacttatgctgcagtcaattcactaataactttgggcaaacctgaagctctgtcatcaattaatagagaaaagttgtacacatttttgctgcgaatgaaagacgcaagtggtggattcaggatgcacgatggtggagaagtagatgttcgtgcctgttatactgccatttctgttgcaaatatattaaacattgtggatgacgagctgattcatggtgttggaaattacatcctaagttgtcagacttatgaaggtggaattgctggcgaaccaggttctgaagctcatggtgggtatactttctgtgggttggctgcaatgattctgatcaacgaagtagatcgattggacttgccaggtttaattgattgggtggtatttagacaaggggtcgaaggtggatttcaaggcaggacaaataaattagtcgatggctgctattccttttggcagggcgcggtagtgtttcttatacaaagactaaatttgatagtccatgaacaactagggctgtcaaatgacctcagtacagaaagtgctgatgattcttcagagtcagagttatctgatgaagaagagcatttggaagggatatcctctcatgttcaggatactttccctcttggacaagcaggtgcttgtcaagaaaatgcttctcatagcccaaaaatagcagatactggatatgagtttatcaaccgacccatagctatgaggcctctctttgacagcatgtatctgcagcaatatgttcttctttgctctcagattgaagttggtggtttcagagacaaacctgggaagggtagagactactaccatacctgttactgtttaagtggtctttcaattgctcagtatagctggaccgacgaagctgattctccaccattacccagggatgtatttggtccttattccaaatgtctgttggaacaggttcacccactcttcaacgtagtgttggatcggtattatgaagctcgcgaatacttctcaggcttgtgagactgtttcaccactttcattagcaccaactttttcagaaacttagttgcaatccagaagttaaaagtgtcattgggttcaaaagagttgtgatcgtttatgtacaatatccttgcatttgtatacgtgatacaagttgagagaataacgggtactttctgaacttgctgaactagcactaaattcgtctctgtttagtgaggtctgtaaacatcaatgtgaaattgcgagatatgcatgtaatagtggctaagatttacaaatctggataccggttattagtgatcagaaatttcattcaatttcccaaacggtcacctaagtttaggatattgctttaaaatattatttatttttcatttaagaatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E02.1" temp_strand="-" temp_description="C02HBa0236E02.1  AC215430.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E02 sequenced_by:kribb upload_account_name:korea">
        <position start="59897" stop="47225"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59597" g_stop="59417" g_length="181"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="181" r_length="181" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59416" i_stop="59314" i_length="103">
            <donor d_prob="0.960" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59313" g_stop="59227" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="182" r_stop="268" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="59226" i_stop="58046" i_length="1181">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.593" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="58045" g_stop="57940" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="269" r_stop="374" r_length="106" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="57939" i_stop="56816" i_length="1124">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="56815" g_stop="56780" g_length="36"/>
          <reference_exon_boundary r_type="cDNA" r_start="375" r_stop="410" r_length="36" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="56779" i_stop="56141" i_length="639">
            <donor d_prob="0.894" d_score="0.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="56140" g_stop="56058" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="411" r_stop="493" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="56057" i_stop="55977" i_length="81">
            <donor d_prob="0.533" d_score="1.00"/>
            <acceptor a_prob="0.738" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="55976" g_stop="55923" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="494" r_stop="547" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="55922" i_stop="55438" i_length="485">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="55437" g_stop="55386" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="548" r_stop="599" r_length="52" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="55385" i_stop="54759" i_length="627">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="54758" g_stop="54694" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="600" r_stop="664" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="54693" i_stop="53379" i_length="1315">
            <donor d_prob="0.496" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="53378" g_stop="53322" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="665" r_stop="721" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="53321" i_stop="53172" i_length="150">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.962" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="53171" g_stop="53099" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="722" r_stop="794" r_length="73" r_score="0.973"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="53098" i_stop="49928" i_length="3171">
            <donor d_prob="0.521" d_score="0.96"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="49927" g_stop="49841" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="795" r_stop="881" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="49840" i_stop="49755" i_length="86">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.919" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="49754" g_stop="49574" g_length="181"/>
          <reference_exon_boundary r_type="cDNA" r_start="882" r_stop="1062" r_length="181" r_score="1.000"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="49573" i_stop="49015" i_length="559">
            <donor d_prob="0.776" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="49014" g_stop="48881" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="1063" r_stop="1196" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="13">
          <gDNA_intron_boundary i_start="48880" i_stop="48133" i_length="748">
            <donor d_prob="0.816" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="14">
          <gDNA_exon_boundary g_start="48132" g_stop="47528" g_length="605"/>
          <reference_exon_boundary r_type="cDNA" r_start="1197" r_stop="1801" r_length="605" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E02.1" gen_strand="-" ref_id="SGN-U576956" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1801</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U576956" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59597" e_stop="59417"/>
          <exon e_start="59313" e_stop="59227"/>
          <exon e_start="58045" e_stop="57940"/>
          <exon e_start="56815" e_stop="56780"/>
          <exon e_start="56140" e_stop="56058"/>
          <exon e_start="55976" e_stop="55923"/>
          <exon e_start="55437" e_stop="55386"/>
          <exon e_start="54758" e_stop="54694"/>
          <exon e_start="53378" e_stop="53322"/>
          <exon e_start="53171" e_stop="53099"/>
          <exon e_start="49927" e_stop="49841"/>
          <exon e_start="49754" e_stop="49574"/>
          <exon e_start="49014" e_stop="48881"/>
          <exon e_start="48132" e_stop="47528"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTAAACGAGCGTTGATTTGTCGCTGACGAAATTTACAGTCAAGAGTAGTAACCGGTTGTAGTGAAAAAATGGAGTCGAGGAAAGTGACGAAGACGCTGGAAGATCAATGGGTGGTGGAGCGTCGAGTCCGAGAGATATACGATTATTTCTACAGCATTTCCCCCAACTCTCCGTCCGACCTGTTAGCTCTCAACCTTTTTCAATTTCTAGGGTTCTTATTCCTTTATTCATCAACTTATTTTTGTGTTGATTTCTTTCTTTCTTTCTTTCTTTCTGTTATAAAGCATAGAGATCGAACGTGACAAACACTTCGGTTATCTAAGCCAAGGTCTCAGAAAACTTGGTCCGTCGTTTTCCGTTTTGGATGCCAGGTAAGTTCCCTCTATCTTTGATCGTTTCTCACCACTAGTTCACTTGTGATGTTGAAGATTCCAATTTTAACTGGTGGCTAATTGGAAAACAAAATTAAAATTTCGTATTATGAATTCAATGTGCTTTAAAAGGAAAATTATTTAGTATTGGAATGGAATTGACTTGAATGAAGTAATGTCTTAGTTAATATAACTTTATATAGCTGATCTCAACTTATTTGGGAGCTAGTCTATTGATTGATTGAGTGACTTTTTAGGAAGAAAAGAACATTGTTTGCAAGATTCAATCGTAATGAGAGAGTTGAGATTCTATGGTAACGAGAGGAAAGAACTAAACAAGCTAACGTGGATGAATATTGACCTTCAAATAAACTCTCTCCAAGCATCCACCCAAGAGTGCAGTCTAGTGGTTAATGAACTAGGTCGAGAATCACGAGGTCTCAAATTCAAAGGCAAAAGGTTAGGTGAGTTCTTCCCAAGTTCTTATACTGTCCATGTATTGAGGGACAGAGTTACCCACTATCTATGCTAGTGGGAGGTAGGACGTACCACGTGGAAATAATCGAGTTGAGCACTCCATAGTTACAAAAAATAAAAATAAAGCTCTCTCCAATGATTAGTTACATACAACATATTTGGATTGGTATAAGTTTCATAATGACTAATCTTGTCAGTGTAGGACACACTAAGGTTTTCTTCTTTTCCATTTTCTCGTGGGGGATCACAATGTTGTCCAACCAACTTGCTCATACCTCGACTAATGGATTGAAACATGCTATCTCTCACTAGCACATGTGCTATCTACCATGGGGTTTGGAACTTTGGTGTATCAGGTTCATCTGAACCCAATAAAATTCAATGTTGGGCATAAATCTGTGTGTAAATTTTTCATGGAATTACAATAAATAGTATATATGAAAGCATAAATTTTATAAATATAATGGGTTCAACAATAAAACTTGAGGGGAAGAATTCTGTGGTCTCCCATTCCCAATGTCCATTCAAACTTCATTAAGTCATGCCCTTTGGTTCCCTTTCCCATACCTCACCAACATAATATAAAAGTTTGGAAAATGTGTTCATCAAGATGGGATCTTGGCGTCTATTCTAGTCCAATGGAACCAAAGGCTATTTTGTTAACATCAACTATTTCTATGCCTTACTTAAGTTTTTCTTTCTAGTCGACCATGGCTTTGCTACTGGACACTTCATTCAATCGCTTTGTTGGGAGAATCTATTGGTGGCAAACTGGAAAATGATGCAATTGACTTTCTGACCCGTTGCCAGGTTTGTTCATTTTGTATTCTGCTGGTTATGTATCTATGTCTTTCTTTAAAAAGAATTGTGTAGGGATTTAGTGTATTTGTTTTTAGGGTGGGTTCAGAGCAAGCTAATAGGATCACTTTCACTGAGGAAAACTTATGTGTAATGAATCACCTTTTTTGTTTGTTTTAGGACCATACTGTGCTACAAGAGCATGATATATATAACAGCAGGCTTTTTTTTACATATTGAGCAGGAGTTTCTTGTGGTGATAAAAGTGAGTTTGAAGCATTAAACTTAGAGAAATTGTTTTACCTCCCAGATTTTGAAGTTAAAACCTGAAAATTTGAGTTTTTGAAATTGTGATTTTTGGAACTTGAAGTTGTGCTTATACATGCATATTACTTGGAAAATTTGAAACTTTTGTGAGTAAAAGTGAATTTCTCCCAAAACTGGTCTGGACCAGCTTTTGGAACTTGATATTTTTTTGAAGACAGATTTTCAAAATTTGATTGAATATCTATGGCCAAACAGATATTTTAAGACAAGTGTTCTAAGCAGAAAAGGCTACTACTAAAGTACATGCTATATTCTAAGTGCCCAGTTACGTCTTGCTTAGGGATGACAACTTTAATAGGCTTCAGCTACTGTACAAAACTCAAGTCTCTGTAGACTTCTCAAAGATATGGTAGACTTTATAACAAACTTCAAGAGGCTTTCCACCAAGGACTTTATTGTGGTTCTTATGAACTAAAATTGGGACTACTTGTATTCATCTCTGTACTATTGCTTAGACATTGTAATCATAAAGAGTTATAGACCAGTGCGCATGATTGATTGTGTTTAGGAGTGACTAATAATGATGCATGGAGAAAAGATTCCGTAGTGATATTCGAGCCTAGTTATAGAAATGTGATATACATGGTGAGTAGAATGTCATCCCAAATTATTGTTATTACCATATTTGCTTAAAAGATAATTTATTGTATTTATGATATGTTTAATCATCCACCTTTCCAGAATACTGGTGTAACTGTCCTTTTTTTTTTCTTGCCTGCGATTCTAGCTAATTTGTTTTTGGACTTCTCGTTCAATAAAATGCGGTAAGATTTAGTTTCATGTGTTGTTTACTGTTACCTTCCTCACAGGATAAAGATGGTGGCTATGGAGGTGGACCTGGTCAGGCAAGTCAAATTCTCCCACTCCAGTCTTAGTGCCGTTAAATCAGATTTGTGTCAGATTCTTCATGCTTATTTTCACATTGAGTTTGATTATCTGATGTCTTCAATTGTTTTTAATATGCAGTATGCTGCTTTATTTTGTGATGATGGTTGATTTGAATATTGTAAATTTGTTAACTCTATAATTCTGTTGGAGGACTTATAATTAAAAGATAATTCTATTAGAGGGAAATAGTCATCTGTATTGATATGCATTTAACTATTGGCATGGTCAGTGGTTTGAGCTTGGGACTTCCACGTTGGAGGTATCCAGTTCGAAACGGAAACGCCTTGCCAGCGAAAGCAAGGGGTTTGCCTTCTGGGTCGAGCTCGCATGGTGCGAGTTACCTCTCCTATGTAGTTTGCGAGCTATTGCATAGGAGCGGGGTTTTACCCTTGTCATTAAAAAAAAAAAGACTATTGGCCTGGTTCTTGTTCTTTTATAAGTTAGCTTGAAACTCTTTTTCTGTTTCTTTTAGAATCACAAATTTAACAGTTCCAAGCTTCGTTTATTCTGGTCAACCTGTTAATTTTATACAGTTCTTGTGCTTCTTATCATTAAGGTTCTTTGAAGTAATACTTGTATTGTATTGCTTTTTTCAGATGCCTCATCTTGCAACTACTTATGCTGCAGTCAATTCACTAATAACTTTGGGCAAACCTGAAGCTCTGTCATCAATTAATAGGTGCACAAGCTATAGTATGTTTTTGTTGGTGTCTTATCTATTGTTCATTCCTGTTGACATTGATCTAGTAATATGCCTCAGAGAAAAGTTGTACACATTTTTGCTGCGAATGAAAGACGCAAGTGGTGGATTCAGGTAGGATGCTTTCTACTTGTTTACATTATTTGATCAGCTCCCCAATTCATGTCTTCCCTTGTATCTCATTCCTAGTCTGCTGTATTTATCTACTATCAGTTTCTAAAAAAAATCTAGGTGCTTTTCTTTCTATTTGTAACTTGTTTATCCATTTTAAATTTGCCATCTCTATGTTGTATGTGCTAATGTTTTCCATTACTACTGATTCTCCTGATTAATCCTACCTGCTAATTTTGTTATGTTTTCCTTCTGAGGAGAACTAGACTTTTGGGTGAACTAGCACTGTAGTTGACACTTTTACCCTGATCTGTAAATGTATAAATATTTGTGTGTGTATTCTTGAGTTTGTAGATCCAAGTGTATTTAACGAACAGCATCTGAGAGATCACTTGTTTCTAGCATTTTCTTTCAATATTCAAGTTTCCTCAAAAATGACTTGCCACTTCCCATCTTTGCTAAGTTCAAACTTCAAATATTATCTGCAGGATGCACGATGGTGGAGAAGTAGATGTTCGTGCCTGTTATACTGCCATTTCTGTAAGTGTGATCTCCTTGTGATCTGAGTTCTGGTCATATTTTCATTATTTTGCTGCACTTGGATGGAAGACTCTGAGATAAGCTTTAAGCAAATATAATTTTCTTATTGATGAATCATGCAAGCTACGTATGTGAAACTTATCCTTCGGGGTGGCCTAGTGGCTTGGGCTTGGGACTTCCATGTTGGAGGTCTCAAGTTCGAAACCTTGCCAGCGAAAGTAAGGGGTTTTGCCTTCTTGTTTGAGCTTGTTGCACCGGGCTTGCCTAGTGCAGCTTACCTCTCTTATGTGGTTTGCGAGCTATTGCATAAGAGCGGGGGTTTTACCCTGTGCGCACCCAAAGGGTAGTGGTTGCGGGTTTCCCTTGTCATAAAAAAAATTAAAAATATGTGAAACTTAACCGTCTCTTTAGTTTTTTGAAAATAAATTAGATTCGAACATTTCCCGAATTTCATTCACGAGGCAATCAAAGCCTTCTGATACACGCCTCTCTTGCAAATCGTATAGATATTTTATACTTTATTACATACACATTTCTTGCATGTTACATTCTCAAGTTTGACGTTTTTCTTCTTAATTGTCTTTGGAATAATGTGCTTTCATGTTAATTGATACATTAGTTTCTTAGGTTGCAAATATATTAAACATTGTGGATGACGAGCTGATTCATGGTGTTGGAAATTACATCCTAAGGTTGGTTTGAGATGCGCACTCATCTGCTACAGCTTATTCAACTCTCTCTTTATGTATACCGTATTCATACTCAAGCTGTAATATCTCTTTTTGATTTACTAGTGTAGTTGTCTTCCAAGAGAAATTACACGAAATTAAAAGAGCATGGCAGAAATTTGGGAGTTTTAGAGGAGTGTAATCTGATAAAAAGATAACTATCAGAAAAGAAAGCAAGTTATATTACAAATGGTTGTGAGACTAGCGATAATACGTGAGTGATTGTTTTCTATAAAACCCAACATGTTCACTAGTTAACTGTCATGAATTATAGATGTTAATATGGATATTTGGTCATACAAGCTTGAAAATCAGATTGGAAATGCTCACCTCCAACAAAAGACGCAACAAGATAGCACGCATAGAGGATCATGAGTGAAGATTTGTCGAAATGGTTTAATTATGTTTACATTAACCTTCGAATATACCAGACTAGGTACAATACTGGAATAATTGAAGTTGCTATAAAGGCAACGAGGTAGATTCTAAATTACATGAAGAAAAACTGTTTAAAGACCTACAATCACCCAAAAGCCATTACATCAATTAGTTGAGATTAAGGAAAAGAAAAGAATTAGTTGTTGTTAAACTTACATTAGGTTGTGTTTGCCAGAGGTCCTTTTGTGTGGTAAGTTATATGTTTATGGCAGAGCAGGTGTGAGATTTTAAGAACTAATATATCTTAAAGGCAAAATATTGAGTATTGGGATGACACAAAGTAATGGATTTGGAGTATTCATATTACTGTCACCAACTAGTCAGTGCATGTTGACTAGTTAATTATACATACTAAATGCATGACCGAAGCTGGTACTTAAGTTGCATTGAAGGGTTTCTTTGAGATTCGATCCCATTGGTAAGAGAACAATTTTCCAAGTATCATTTCAGAACGATGTTATGTTTGAATATTCATGGCTCTGAGTTGATGACAGCCTCCATTTGTCAGGGATTAAAATATGAGAGATAAGTGATGTTTCCTAATTCTTGCCATCTGAGAAAGTTGAAAGTCCTTGAATAAAAATTGATGAAGGAACTATTCTTTTATTCTAGTTTGTTCTTATTCTTGTTCTCTGAAGTTCTTGATTTAATCCTAGTCTCATCATAAGAATTATTTAGCTAGGATAAATAAGAATTTATTCTATTTAGTGTCAGAAATACAAGATAAGAAGCAGGTGGCAGATCTTTCTTTTCCTTAATGTCCCTCATTTTTTGTTTGAAATATTAAGAATGTATTTTCATGGATAAGCCTTTCCTAAGCTGTTCTCCGTTTTTGCTTCAGTTGTCAGACTTATGAAGGTGGAATTGCTGGCGAACCAGGTTCTGAAGCTCATGGTGGGTAAGTCTCACGTTGGAGATATTCTCATCTTTCTAATCTTGTTTCGCTCTTTTTCTTATAGTTCTCTTTCAATGTTAGTTGCCGTAGTAGAACTATCACTTCTCAGCTTATGATGTTACTGAAGCCCTTTACATTTAACTCATTTTCTAGGTATACTTTCTGTGGGTTGGCTGCAATGATTCTGATCAACGAAGTGAATCGATTGGACTTGCCAGGTTTAATTGTAAGTTGCTTTAGGACTCTGTTGGGGACTGATGAGTGTTGCTAAGATAATCATGTGTGTGTACACTCTCTTTTTTTAGCATCAGAGTGACAGGACTATGGCATTCCTCTCACTGTCATGAAATGGGATATTATCATTTCTTTTTTGTTACTGGCCTTCATGACTGATTAAATGAAACTGAAACAAGATTGTTATAATAGTTGCATTTTAGTTTGTCTTCACAAATGTTCCACATTGCTTTTTTGTTGCTTATCATAAAATGTAAAGGAGAACAAAAAGAACGTAGACTCTTCTCTCAGAAAGTTACTCAACTTTCAATTTTCACTCAAAAGTCACTCAACTATGCACTTCTTTCCAGAAAGTCACTCAACTTTGAATTTTAATTCAAAAGTCACTCAACTATCCACTCTTTCCTCAAAAAGTCACTTAATCTATTAAATTGTTTTTTAATTAAAATTTATTGATATTAATTATTTATATAACAAACCAAAATTTTTAAAAAATAAAAATACCATTTAAAGATCCACCCACCTAACTCGACCCATTAAAAAATATGATATGATCTATTTTATTTTGTCTTTAATCCTAATTCAAGGTTTAAAGAGAGGGATTAATTTAGGATTAAAGACAAAATAAAATGGGTCATATTATATTTTTAATGGGTCGGGTTAGGTGGGTGGATCACTAAATGATTTAATTTATTTTTTAAAAATTTTGGTTTGTTATATAAATAATTAATATCAATAAATTTTAATTAAAAAACAATTTAATAGATTGAGTGACTTTTTGAGGAAAGAGTGGATTGTTGAGTGACTTTTTGAGGAAAGAGTGGATAGTTGAGTGACTTTTGAATTAAAATTCAAAGTTGAGTGACTTTCTGAGAAAGAAGTGCATAGTTGAGTGACTTTTGAGTGAAAATTGAAAGTTGAGTGACTTTCTGAGAGAAGAGTGCATAGTTGAGTGACCATCTGAGGTATTAACTCAGAACGTAGAGATGAGCTGAATCTCAGCTGGCAATTGAAGAACTGGAAAAACATTTTAGTGCTGTGATTACCGAGTACAGGAGATTATTCTAGTACTTAAGGTGATAAGCCATAATCCAAAAAAATAAATAAAATCATTGGTTTTATGATGGTAGGCTATTTTATTTTTACAGATACAACTTTTTGTTGGATATTTAGGAATCAAAAGTGAATAAATTGGAAATAACTTTGATGCACTAGAAAAGTTAGCATATGGGAAAAAGTGTATTAGATGATAAACAACTGGGAAATAACATGCAACATTTTGGTGGTTGTCCTTATTGGGGATGTTGGAGTATTATTTTTGAATGCTTTTTATTACCTTGTTGGAGTATTAAACTTTTGAATGCTTTTTATTACCTTGTGGTCCGACCCTTCCTTGGACCACGCTATGCGCAGGGAGCTTGGTGTTGGGTTCGAAAGTGATTAAGGCGTCATGTCGAAGTTTACAATTGCAAATCAAGATGTTGATAAATTAGATGACAAAAACTTATACTAAAAATTAAAATATTATTATATAGAATTTGGTCAATTGACCTACATATTAAAAACTAATTTAAAACATTAAAATTGTTTAGAAAAAATCTCCCCATAATCCTTCGAGGTGGCCCAGTGGTTTGAGCTTGGGAGTTTCATGTTAGAGGTCTCAAGCTCGAAACCCCTTGCCAGCGAAAGCAAGGGGTTTACCTTCCGGGCCGAGCTCGTCGCACCAGGCTTGCCTAGTGCGGGTTACCTCTCCCATGTGGTTTGCGAGATATTGCATAGAAGCGGGATTTTAACCCCGTGTGCACCCAAAGGGTAGCGGCTGCAGGTTTCCCTTGTCATAAAAATAAAATACAATCTCTCCATAAAGAAAAGTCTCTAAAACGAGTACATTGTGGATTCTATTGTTGTTTTGTGATGACTTATGAGAATAGGGATTTTCAATATATAATCTCCTAACTTTTTCTTTAACGAAAAAATAAACCAAATATGAAAAAAAAATATTTTCCTTTCATGAAAAGTAAAAACATTTGAAGTACTGTTTTGTCTCTTCTTTTAGAAAAAAAGGGAAAAATATTAAAATATACCCCCGAACTATCGTAAATGGTATGCAAATATCCTCCGTCATACTTTTGGGACATTGGTGCCCCTGTCTTCCATAAACTAGAACATATATGCCCTTCACTCAGACACGTGGTCCAATCTTATTCGTCGATAAATATTGTATCGGTGGATAAGATTATAACACGTGTGTGTCCGTTAGTATAAAGGGTATATATGCTCTATTTTTTGGACGACAGGGGCACCAATGTCCCAAAAGTATGATGGATGGTATTTGCATACCATTTACAATAGTTCGAGGGTATATCTGTCCTTTTCCCCTAAAAAAAATAAATTTCAGATAAGCTATGAAAATTAGAACAAAATCTTAACACTTACGGGTCGTTTGTTAGAGCATATAAAAATAATACCTAATAGATTGTGTTAGTAATGAAAGCATTAGTTATACTTGTATTAGTTATGCATTGTTTGGTTTGGTATATTAAAAATAGTGTGTATTATATAAAATATATATTTACAAAAGTAGCCTTCACAATTATGGTGGAAAAGATAACCATATTAATGCACGTATTAAATCCTTTGCATCACTAATACCAAGAAATCCATGCTATTAGTAATACACTCTTCAATACACAATAGAATAGTGTGTATAATTAGTCATACATAGCATGAAAAAATGCACTAAACAAGGTACTACTAATACATATAATTAATGCATGCATTATTTTTGCTAATACACCACCTTTTTATATGGTTAGGAGGATATCTAGGAACTCAGGAATGGCCTTCTGGCCTTTAATTTTGGTTTTGACGCTGGTTCATTTTGTAGAGCTGCACCAGGTTCTGTTGCTGCATTCCTGGGATTGTTGGGGGTAGATTATTAATGAACGTATTAGTTCCTTTTCCTTCCAAGTATCTTTCGTATAGTAGTACCTCTACATGACTTCCTCTTAGTCTCTTTACTTCTCTTAGCAGTTTCATTCTGTTGCTTTTTTAATAACTCTTCCCAAGTTGAGTTCTATCGAGTTGTTGAATTGATGTTACTTAAATCTGGATCATCTGACGGTATTGATGGAGATGATGTATTATGATTATGAATCTTTAGGATTGGGTGGTATTTAGACAAGGGGTCGAAGGTGGATTTCAAGGCAGGACAAATAAATTAGTCGATGGCTGCTATTCCTTTTGGCAGGTGACTACCAGTTTTACCTTTATGTCCTGAACTCTTCCATTTCCAGTTTAATTATTACTGAGCTAAAGATGACTTTGATTGATCAGGGCGCGGTAGTGTTTCTTATACAAAGACTAAATTTGATAGTCCATGAACAACTAGGGCTGTCAAATGACCTCAGTACAGAAAGTGCTGATGATTCTTCAGAGTCAGAGTTATCTGATGAAGAAGAGCATTTGGAAGGGATATCCTCTCATGTTCAGGATACTTTCCCTCTTGGACAAGCAGGTATGTCAATTTGAGGAACAATAGTTCAAAAGGCCAAAAAGAAAGTACCACTGTGTGATTCACTGGTCTGTTTGTTGCAGTGCTATTCAACTTTGTCCTTGGATCTGAATTAAATAGAGCATATCATGTTATAACGGAATCCAGTGGGTGGAATTTAATAAATGAAGGATGAAAAGAATATATTCCATCTTAAACCACTTCTCTTGTCACAGAAGTGGCACTTGGATTGTATATGAACTTGATATCTCCAGATGGTCAGGTAGTTAGTAACCTATAGTGCTATCAGCTGAACTTCACCTTAACTAGTTACCATATGTTGGATTCTTCAAACAATGTATGTGTAAAAGTTGGATTATCAAAATGGGTTGTATGTCCCTTACTCTGATCCATTTGTCCATTTGACGGTGTACCGAGATTGTTTAGTAGAGCATTTCATTGGAAGTTTGAAACTCTGACAGCTCCTAATATTTCTATCCAGATTCTTTGTGTTGTCTAGATCTTTCTTTCTTTTAGGTCTTATCACAATTACTTTCTAATCACATCATTTCATTTTTCTTAGGTGCTTGTCAAGAAAATGCTTCTCATAGCCCAAAAATAGCAGATACTGGATATGAGTTTATCAACCGACCCATAGCTATGAGGCCTCTCTTTGACAGCATGTATCTGCAGCAATATGTTCTTCTTTGCTCTCAGGTGCTTAAATTTTCGAGAAAATATATTCTGAAGATCCCTGTTCACTCTTGCATGTCCCTTGCTTTGGTGTAGGATTGTAATGCATATGCACAGCAGCACAAGCTGGAAAATAAGGGATGAAGAAAAAATCTCAAGAAAATTATAATCGTATAAGAAGCTAAGATTTTGTTTATAAAATTTGTAACATCACTGAAAATGCATATGAGAAACTGGTTTATTTGAGCTTCTAGGCCCTACATAGTTTAAAGAAATAAGTAAATTATATCGGGTTTCTCTCCTAATCTCGTCTGAAGATGGAATTGTTGTCTGATTTTGGAGCATCACTAAAACCACACCGTTCTTGTTAGAACATCTTGAATATCATTCATCTGCTGGGCATCATTATTTCTCCATTAACATATAAATTCAAGAGCCTTTAAAAGGCATGTGTATTTGATATAATGTTCTTTTTTGAATTTGTTGGCAACATGAAGTCGTGTACTAATCATCCTCTTAATTGGTGTTGGATTCAACAGCTTTATTTTGCATTCTTTTCATAATCAGAGTTCAATTTTCTTGTGTATAATTGGTAACTATTTATTCATTCTTCCAAGGGAAAAAGAAAGTTAAGTGGGTTTTAAATATTCTATATCAGATGCTGCGACTCACCAAGATATTAGTGTTTAGTTTCTTTTGGCAGTTTGTTATTCCTGTTTCTATTGCTTTTATATCTTTTTCAAGATTCTAATATATCATGTTGTGGATGTAGATTGAAGTTGGTGGTTTCAGAGACAAACCTGGGAAGGGTAGAGACTACTACCATACCTGTTACTGTTTAAGTGGTCTTTCAATTGCTCAGTATAGCTGGACCGACGAAGCTGATTCTCCACCATTACCCAGGGATGTATTTGGTCCTTATTCCAAATGTCTGTTGGAACAGGTTCACCCACTCTTCAACGTAGTGTTGGATCGGTATTATGAAGCTCGCGAATACTTCTCAGGCTTGTGAGACTGTTTCACCACTTTCATTAGCACCAACTTTTTCAGAAACTTAGTTGCAATCCAGAAGTTAAAAGTGTCATTGGGTTCAAAAGAGTTGTGATCGTTTATGTACAATATCCTTGCATTTGTATACGTGATACAAGTTGAGAGAATAACGGGTACTTTCTGAACTTGCTGAACTAGCACTAAATTCGTCTCTGTTTAGTGAGGTCTGTAAACATCAATGTGAAATTGCGAGATATGCATGTAATAGTGGCTAAGATTTACAAATCTGGATACCGGTTATTAGTGATCAGAAATTTCATTCAATTTCCCAAACGGTCACCTAAGTTTAGGATATTGCTTTAAAATATTATTTATTTTTCATTTAAG</genome_strand>
        <mrna_strand>GTAAACGAGCGTTGATTTGTCGCTGACGAAATTTACAGTCAAGAGTAGTAACCGGTTGTAGTGAAAAAATGGAGTCGAGGAAAGTGACGAAGACGCTGGAAGATCAATGGGTGGTGGAGCGTCGAGTCCGAGAGATATACGATTATTTCTACAGCATTTCCCCCAACTCTCCGTCCGACCT.......................................................................................................CATAGAGATCGAACGTGACAAACACTTCGGTTATCTAAGCCAAGGTCTCAGAAAACTTGGTCCGTCGTTTTCCGTTTTGGATGCCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGACCATGGCTTTGCTACTGGACACTTCATTCAATCGCTTTGTTGGGAGAATCTATTGGTGGCAAACTGGAAAATGATGCAATTGACTTTCTGACCCGTTGCCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAAAGATGGTGGCTATGGAGGTGGACCTGGTCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCCTCATCTTGCAACTACTTATGCTGCAGTCAATTCACTAATAACTTTGGGCAAACCTGAAGCTCTGTCATCAATTAATAG.................................................................................AGAAAAGTTGTACACATTTTTGCTGCGAATGAAAGACGCAAGTGGTGGATTCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCACGATGGTGGAGAAGTAGATGTTCGTGCCTGTTATACTGCCATTTCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCAAATATATTAAACATTGTGGATGACGAGCTGATTCATGGTGTTGGAAATTACATCCTAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTCAGACTTATGAAGGTGGAATTGCTGGCGAACCAGGTTCTGAAGCTCATGGTGG......................................................................................................................................................GTATACTTTCTGTGGGTTGGCTGCAATGATTCTGATCAACGAAGTAGATCGATTGGACTTGCCAGGTTTAATT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTGGGTGGTATTTAGACAAGGGGTCGAAGGTGGATTTCAAGGCAGGACAAATAAATTAGTCGATGGCTGCTATTCCTTTTGGCAG......................................................................................GGCGCGGTAGTGTTTCTTATACAAAGACTAAATTTGATAGTCCATGAACAACTAGGGCTGTCAAATGACCTCAGTACAGAAAGTGCTGATGATTCTTCAGAGTCAGAGTTATCTGATGAAGAAGAGCATTTGGAAGGGATATCCTCTCATGTTCAGGATACTTTCCCTCTTGGACAAGCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCTTGTCAAGAAAATGCTTCTCATAGCCCAAAAATAGCAGATACTGGATATGAGTTTATCAACCGACCCATAGCTATGAGGCCTCTCTTTGACAGCATGTATCTGCAGCAATATGTTCTTCTTTGCTCTCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGAAGTTGGTGGTTTCAGAGACAAACCTGGGAAGGGTAGAGACTACTACCATACCTGTTACTGTTTAAGTGGTCTTTCAATTGCTCAGTATAGCTGGACCGACGAAGCTGATTCTCCACCATTACCCAGGGATGTATTTGGTCCTTATTCCAAATGTCTGTTGGAACAGGTTCACCCACTCTTCAACGTAGTGTTGGATCGGTATTATGAAGCTCGCGAATACTTCTCAGGCTTGTGAGACTGTTTCACCACTTTCATTAGCACCAACTTTTTCAGAAACTTAGTTGCAATCCAGAAGTTAAAAGTGTCATTGGGTTCAAAAGAGTTGTGATCGTTTATGTACAATATCCTTGCATTTGTATACGTGATACAAGTTGAGAGAATAACGGGTACTTTCTGAACTTGCTGAACTAGCACTAAATTCGTCTCTGTTTAGTGAGGTCTGTAAACATCAATGTGAAATTGCGAGATATGCATGTAATAGTGGCTAAGATTTACAAATCTGGATACCGGTTATTAGTGATCAGAAATTTCATTCAATTTCCCAAACGGTCACCTAAGTTTAGGATATTGCTTTAAAATATTATTTATTTTTCATTTAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U579280" ref_strand="+" ref_description="SGN-U579280 Tomato 200607#2 [174 ESTs aligned] (*GB) gi|56562181|emb|CAH60893.1| (e_value=0) formate dehydrogenase [Lycopersicon esculentum]; (*ATH) AT5G14780.1 (e_value=1e-179) | Symbol: None | formate dehydrogenase (FDH), identical to GI:7677266 | chr5:4776987-4779497 FORWARD | Aliases: T9L3.80, T9L3_80; (*SWP) sp|Q07511|FDH_SOLTU (e_value=0) Formate dehydrogenase, mitochondrial OS=Solanum tuberosum GN=FDH1; ">
      <seq>attgggagttgaagcaggtcgcttctaagtactgggccttcgccctttcctataaaaagccgttacgtctctccagtaagtcatctcagccaactggagtttattcttctctctgtttttagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggcttcccctggccccaaaaagattgtgggtgttttctacaaagcaaatgaatatgctgaaatgaaccccaactttttgggctgtgcagaaaatgccttggggatacgtgaatggttagagtctaaaggtcatcagtacatagtcactcctgacaaagaaggaccagattgtgagcttgagaaacacattcctgatctccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgaaaggatcaagaaggcaaaaaatctacaacttctgctgacagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcagaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatggggagtggaatgttgctgcaattgcgcacagagcttatgatttggaaggcaagactgttggaactgttggtgcaggacgtattggcagacttttactccagcgattgaagccatttaactgtaatctactttaccatgaccgtcttaagatggattctgagctagagaatcaaattggagcaaagtttgaggaagatctcgataagatgctctcgaaatgtgacatagtggtcatcaatacgcctcttacagagaaaacaaaaggaatgtttgacaaggaaagaattgcaaagttgaagaagggagttctaattgtaaacaatgctcgaggagcaattatggacactcaagcagttgttgatgcttgtaacagcggtcatattgcaggatacagtggagatgtttggtacccacaaccagctcccaaggaccatctatggcgttacatgccaaaccaagctatgactcctcacatttctgggactaccattgatgcacagttgaggtatgcagctggaacaaaggatatgttggacaggtacttcaagggtgaggatttccctgctgaaaattacattgtcaaggatggggaattggcacctcagtatcgctaaattatttatgtatagagttgtgtctagatttctgtgttaaataaactggcaagccgtgtcttcaataagctgataaaattggctactttatgttcttctagaactctaatgcagtttttctccgggttagctgtaacttttgtgatggaaacatatgtcctcttctgtgatggaggtctatgtatgatcctccagtgtctttcttgagtctataactgaacttccttgctgtggtagttgtactggtgttcctggacattttatgttttaaaaaaaattatcttcttgtttgctagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E02.1" temp_strand="+" temp_description="C02HBa0236E02.1  AC215430.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E02 sequenced_by:kribb upload_account_name:korea">
        <position start="65147" stop="70341"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65446" g_stop="65689" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="244" r_length="244" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="65690" i_stop="66849" i_length="1160">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="66850" g_stop="67021" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="245" r_stop="416" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="67022" i_stop="67764" i_length="743">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="67765" g_stop="68305" g_length="541"/>
          <reference_exon_boundary r_type="cDNA" r_start="417" r_stop="957" r_length="541" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="68306" i_stop="69046" i_length="741">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.768" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="69047" g_stop="69171" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="958" r_stop="1082" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="69172" i_stop="69406" i_length="235">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="69407" g_stop="69519" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="1083" r_stop="1195" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="69520" i_stop="69630" i_length="111">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="69631" g_stop="70041" g_length="411"/>
          <reference_exon_boundary r_type="cDNA" r_start="1196" r_stop="1606" r_length="411" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E02.1" gen_strand="+" ref_id="SGN-U579280" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1606</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U579280" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65446" e_stop="65689"/>
          <exon e_start="66850" e_stop="67021"/>
          <exon e_start="67765" e_stop="68305"/>
          <exon e_start="69047" e_stop="69171"/>
          <exon e_start="69407" e_stop="69519"/>
          <exon e_start="69631" e_stop="70041"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTGGAGTTGAAGCAGGTCGCTTCTAAGTACTGGGCCTTCGCCCTTTCCTATAAAAAGCCGTTACGTCTCTCCAGTAAGTCATCTCAGCCAACTGGAGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAAGTAAGGTTTCTGTTTCTGTAATTACCCGTCGTAAACCTATACAATAATATTTATTGACAAAGCTTCTTATATTCAAGTTATTTTAACAATGACTTAATTATGAAATGAACTAAGTAAGCTAAAGTGAATATTCATTGAGAATGAAATATGATATTTAGCGAAGGGAAGGAGAATCTTTGGTGTCATCGTAATTTTTTGGTATCACTCTAGATCATATATAAAGTAGTTGTATATTTAGATTCCCCGATTGTATTCCCTAAGTTAAGAAATTCTCTTGAGCATCCACCATATACTATGATACATGACTTTGGCTAAGCTCAAAAAGACTATCTCAATGATGGCCCTCCATGGATTCTCCACCTATATAAGCCACGGCTAAAGAAAAATTGCTTGGCCAAGTTGTCTTTTACCTTTGGCATGATGCAAAAAACATTTGATATTCTTTCTGTGTGAACCACTGCTACGAGTAATATGTTCTTAGAGATCATGTTTTCTTTTTGTTCTTCCTTTAATTTTCTATTTGAAGATTTGTCATCAGTTAGAGGTCATCGGTAGGATGATAGATGTTCTCAGCAACTTGTGTTGCCAGAATAATATGATTGCCAATGGAGTATTTTTAAGATTCTTGGAGATGTAAGAGTTGTTTCTGTCCATACATCACTCTTCTCATGTCACTAAGGTCATTGATTGTTTCCATGTGCTATATCGCAAATTGCTCACAATTTTAACTATGTGATCCAGAGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAGGTATTTTAACATAACTTGAACACATCATCCAGAGATGAGCCCTCAGCCTTAATATCAATTGAACACACCATTATATTTTTTTCTTCAATTCTTGCTTGTTTCTTTTCTTCAATATATTTTATCGACATTTGGAAGTAGTTCCATATCTTGTGGAATTGCCGAATCCTTTGAAGAAAGAAGTACTTCTAAAACTATATTGAGTTCTTTTCTTTCGGTTATTTCCCCCCAAATTTAGGATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAGGTTTGTAAATACTCTGTTTCTCTAATTTCTTTAGGCTTTGCTTTTTCTTTACTTTCACGACATTATAATTGCGATTAAACTGAGAGAAGCTTGTTACTTTCAATTTCGCAGTTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGTTGTGTCTAGATTTCTGTGTTAAATAAACTGGCAAGCCGTGTCTTCAATAAGCTGATAAAATTGGCTACTTTATGTTCTTCTAGAACTCTAATGCAGTTTTTCTCCGGGTTAGCTGTAACTTTTGTGATGGAAACATATGTCCTCTTCTGTGATGGAGGTCTATGTATGATCCTCCAGTGTCTTTCTTGAGTCTATAACTGAACTTCCTTGCTGTGGTAGTTGTACTGGTGTTCCTGGACATTTTATGTTTTAAAAAAAATTATCTTCTTGTTTGCTAGT</genome_strand>
        <mrna_strand>ATTGGGAGTTGAAGCAGGTCGCTTCTAAGTACTGGGCCTTCGCCCTTTCCTATAAAAAGCCGTTACGTCTCTCCAGTAAGTCATCTCAGCCAACTGGAGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAG...........................................................................................................................................................................................................................................GATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAG...............................................................................................................TTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGTTGTGTCTAGATTTCTGTGTTAAATAAACTGGCAAGCCGTGTCTTCAATAAGCTGATAAAATTGGCTACTTTATGTTCTTCTAGAACTCTAATGCAGTTTTTCTCCGGGTTAGCTGTAACTTTTGTGATGGAAACATATGTCCTCTTCTGTGATGGAGGTCTATGTATGATCCTCCAGTGTCTTTCTTGAGTCTATAACTGAACTTCCTTGCTGTGGTAGTTGTACTGGTGTTCCTGGACATTTTATGTTTTAAAAAAAATTATCTTCTTGTTTGCTAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U593744" ref_strand="+" ref_description="SGN-U593744 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|56562181|emb|CAH60893.1| (e_value=2e-129) formate dehydrogenase [Lycopersicon esculentum]; (*ATH) AT5G14780.1 (e_value=4e-101) | Symbol: None | formate dehydrogenase (FDH), identical to GI:7677266 | chr5:4776987-4779497 FORWARD | Aliases: T9L3.80, T9L3_80; (*SWP) sp|Q07511|FDH_SOLTU (e_value=2e-129) Formate dehydrogenase, mitochondrial OS=Solanum tuberosum GN=FDH1; ">
      <seq>gaattgagccaactggagttctcttcttcgctctgtttttagtaagtacgaaacccttttctgtcattccaaaaaaaattcctagggcaatgaggcgagtatcttcgacagcagctcgagctattgcttcaccttcatccttagttgttaccagataacttcgggcttcccctggccccaaaaaaattgggggagtgtgctacaactccaaagaataggctaaagtgaaccccaactttttgggctgagcataaaatgcgttgggaatacctgaatggttagagtctaaaggacatcggtacataatctctccggacaaggaaggaccaaattgtgagcttgagaaacccattcctgatcgccatgtgttgatttcgaccccttttcatcctgcctatgtcacggctgagaggatcacgagagcaaaaaatctacaccttctgctgagagctggaattggatcagatcatgttgatctgaaagctgctgctgctgctggattgacagtagcataggtcactggaagcaatactgtctcagttgcggaagatgaactgatgccaatcttaattcttgtccgaaataacttacctggacatcatcaggttatcaatggggagtggaatgttgctgcaattgcgcacagagcttatgatttggaaggcaagactgttggaactgttggtgcaggacgtattggcagacttttactccagcgattgaagccatttaactgtaatctactttaccatgaccgtcttaagatggattctgagctagagaatcaaattggagcaaagtttgaggaagatctcgataagatgctctcgaaatgtgacatagtggtcatcaatacgcctcttacagagaaaacaaaaggaatgtttgacaaggaaagaaattgcaagttgaaaaaggaagttctaattgtaaacaatgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E02.1" temp_strand="+" temp_description="C02HBa0236E02.1  AC215430.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E02 sequenced_by:kribb upload_account_name:korea">
        <position start="65228" stop="69410"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65527" g_stop="65689" g_length="163"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="164" r_length="164" r_score="0.877"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="65690" i_stop="66849" i_length="1160">
            <donor d_prob="1.000" d_score="0.92"/>
            <acceptor a_prob="1.000" a_score="0.82"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="66850" g_stop="67021" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="165" r_stop="336" r_length="172" r_score="0.860"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="67022" i_stop="67764" i_length="743">
            <donor d_prob="0.994" d_score="0.86"/>
            <acceptor a_prob="0.987" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="67765" g_stop="68305" g_length="541"/>
          <reference_exon_boundary r_type="cDNA" r_start="337" r_stop="877" r_length="541" r_score="0.978"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="68306" i_stop="69046" i_length="741">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.768" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="69047" g_stop="69110" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="878" r_stop="941" r_length="64" r_score="0.906"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E02.1" gen_strand="+" ref_id="SGN-U593744" ref_strand="+">
        <total_alignment_score>0.934</total_alignment_score>
        <cumulative_length_of_scored_exons>940</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U593744" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65527" e_stop="65689"/>
          <exon e_start="66850" e_stop="67021"/>
          <exon e_start="67765" e_stop="68305"/>
          <exon e_start="69047" e_stop="69110"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATCTCAGCCAACTGGAGTT-TATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAATTGCTACCAAGTTAAATTTAAGAATGTTACATAAATTTAGAGACGGCAAGTTTATATACCAAGAAGGGTACTCCTTCATCCACAGAGAAACGGTGTCCAGTTCGAGTATGGGCGTGAATCTAGATATAGTTAATTCCAATGCAGATATCAGACATCGAGTGAGGAAAAAAAAGATTTTATTAATTTGTTATTTTTAGGTTGCTTTTCCTTTAACTGAAAATCTAACCCGGCAGGACCACAACAGTTCTTTTCCGATCATTACTAATGATACTTGATTTTCACGTGCGATTTCTGATATTTTTATACGGAGTAGGTGAAGAGTGAAATGTTTCACGGGTCTCAAGGACAATGGCAGCAGTGCTTCATTTTTTTTTGCATCTTCACGTGCTATATTATTACTTTGTTTATACTAGTTCGACTTGGAAAATCTTTTCATATTCAGTTGTCTGGGGAATAAATAAGATATTTCTTATTTTTTGATTAAAAAAAGAAGAAGATATTTCTTATTTAAAGAAGTGACAAATTGTACTAACTCATTTACCATGCCTAATATATTATATGTGACAATGATGATTTTTTTTAACTATTAATTGTTAGTTTGGACAAAAATGATCAAAGCAAGTATATTGAATAATGCTTATTTCTTGCCAACTGGTGCATCTACGAGATTATAGGAGTTGGATTATAATTTTAGCACATCCAGCATGCTTATATGACCTTAAAATATTCATGTATATTCTGTCCACTCACCTTTTATTTCTTCATTATTTTACAGGCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTGGTTAGTTCCTGCTAATCTATAATCTCTCATGTTCTATCCATTATCCCACTGAAGCCTATGCATTTCTAAAGATAATTTCTTTACCCTTCATGCTTGTACAACTAAACACATCTTAAAAGGAGTATTTTTGCATTTAAAACATGCATATATGTGCTGAAGTTTTTTAAAAATATATGGCTCACGTGAGGAGAATATAACGGTCATAGCAGGAACATTTATTTAGATAAAGAGCAAAGCAAAGTAAACAATATTTGCTTTGTTAGTGTTGGTCCTTTGCTGCTAGTGAATTATGATCAGGACATTGTGAGGTAGTTTCTTGCAGGAGGGAAAAAAAGAGTGTATTTTACCTTGATATACAGGTGTGCATTTGCAAAACGTCTATACTTCAGGACTCAGGTGTAAGTTGTACTAGTTTGATAAGACTATGGCTAAATTTTGTAATTTAAACAAGGATTTATCAAAGTCGCAGGGGCTTGTTTAGTTGTTGAGTAGAGTGCACACATGGATGCTTTAGTGATTTTCTGATGGATGACATGCTTAGTGTAAATCCTTGCTTATTAGTATCTTTTATCATGAGAAAGAATGGTGCCCTAGTCTGACACACAAACTACTCTGTGTCTTAGTTTTTCACTGTTGAATCCTTTACTATGCTCTATGCAAAGAAATTTCTCCTGAGCTAAAGTTTTTGAGTGTGTCCATCTATAATAGCTTCTTTTTTTTTTCCCATGACTTTCTCTCTGCAGAGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAAGTAAGGTTTCTGTTTCTGTAATTACCCGTCGTAAACCTATACAATAATATTTATTGACAAAGCTTCTTATATTCAAGTTATTTTAACAATGACTTAATTATGAAATGAACTAAGTAAGCTAAAGTGAATATTCATTGAGAATGAAATATGATATTTAGCGAAGGGAAGGAGAATCTTTGGTGTCATCGTAATTTTTTGGTATCACTCTAGATCATATATAAAGTAGTTGTATATTTAGATTCCCCGATTGTATTCCCTAAGTTAAGAAATTCTCTTGAGCATCCACCATATACTATGATACATGACTTTGGCTAAGCTCAAAAAGACTATCTCAATGATGGCCCTCCATGGATTCTCCACCTATATAAGCCACGGCTAAAGAAAAATTGCTTGGCCAAGTTGTCTTTTACCTTTGGCATGATGCAAAAAACATTTGATATTCTTTCTGTGTGAACCACTGCTACGAGTAATATGTTCTTAGAGATCATGTTTTCTTTTTGTTCTTCCTTTAATTTTCTATTTGAAGATTTGTCATCAGTTAGAGGTCATCGGTAGGATGATAGATGTTCTCAGCAACTTGTGTTGCCAGAATAATATGATTGCCAATGGAGTATTTTTAAGATTCTTGGAGATGTAAGAGTTGTTTCTGTCCATACATCACTCTTCTCATGTCACTAAGGTCATTGATTGTTTCCATGTGCTATATCGCAAATTGCTCACAATTTTAACTATGTGATCCAGAGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCT</genome_strand>
        <mrna_strand>GAATTGAGCCAACTGGAGTTCTCTTCTTCGCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTCATTCCAAAAAAAATTCCTAGGGCAATGAGGCGAGTATCTTCGACAGCAGCTCGAGCTATTGCTTCACCTTCATCCTTAGTTGTTACCAGATAACTTCGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTCCCCTGGCCCCAAAAAAATTGGGGGAGTGTGCTACAACTCCAAAGAATAGGCTAAAGTGAACCCCAACTTTTTGGGCTGAGCATAAAATGCGTTGGGAATACCTGAATGGTTAGAGTCTAAAGGACATCGGTACATAATCTCTCCGGACAAGGAAGGACCAAATTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTGAGAAACCCATTCCTGATCGCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAGAGGATCACGAGAGCAAAAAATCTACACCTTCTGCTGAGAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCATAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCCAATCTTAATTCTTGTCCGAAATAACTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAATGTTTGACAAGGAAAGAAATTGCAAGTTGAAAAAGGAAGTTCTAATTGTAAACAATGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U590370" ref_strand="+" ref_description="SGN-U590370 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>cttctctctgtttttagtaagtacgaaacccttttctgtaaatccaaaaaaaattccgatggcgatgaggcgtgtagcttctacagcagctcgtgctattgcttcaccttcatccttagtttttaccagagaacttcaggtaactagccatttctcctcaatagccactttttgttgcttttgttttatatgacctagttttcgccctttgatgaattatcggaaaccggcacggatcaactccgatttttcgagaatcaagtgagttggagattggaacagaggaaactaaaggaatttaaccgtgtaaaggaaaaaattaaacacactgtatttggtgctctacccctcgtctcttctttttggctttccccgtactctacacaccaaatgaaatggctcggatatgaaaggactaataacttttcagttttcattactgcgtccttttttaagctttcagttttaatttgcgtgaatatacctaatttttattagggtagagttatatgtttcaaattaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E02.1" temp_strand="+" temp_description="C02HBa0236E02.1  AC215430.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E02 sequenced_by:kribb upload_account_name:korea">
        <position start="65251" stop="66374"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65551" g_stop="66074" g_length="524"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="524" r_length="524" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E02.1" gen_strand="+" ref_id="SGN-U590370" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>524</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U590370" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65551" e_stop="66074"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAA</genome_strand>
        <mrna_strand>CTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U579029" ref_strand="+" ref_description="SGN-U579029 Tomato 200607#2 [14 ESTs aligned] (*GB) gi|26454627|sp|Q07511|FDH_SOLTU (e_value=1e-69) Formate dehydrogenase, mitochondrial precursor (NAD-dependent formate dehydrogenase) (FDH); (*ATH) AT5G14780.1 (e_value=4e-58) | Symbol: None | formate dehydrogenase (FDH), identical to GI:7677266 | chr5:4776987-4779497 FORWARD | Aliases: T9L3.80, T9L3_80; (*SWP) sp|Q07511|FDH_SOLTU (e_value=7e-71) Formate dehydrogenase, mitochondrial OS=Solanum tuberosum GN=FDH1; ">
      <seq>tgccttaggctggaattggatcacatcatgttggtctgaaagctggtggtgctgttggattgacagtggcacaggtcactggaagcaatactgtctcagttgcggaagatgaactgatgcgaatcttaattcttgtccgaaatttcttacctggacatcatcaggttatcaatggggagtggaatgttgctgcaattgctcacagagcttatgatttggaaggcaatactgttggaactgttggtgcaggacgtattggcagacttttactccagcgattgaacccatttaactgtaatctactttaccatgaccgtcttaagatggattctgagctagagaatcaaattggagcaaagtttgaggaagatctcgataagatgctctcgaaatgtgacatagtggtcatcaatacgcctcttacagagaaaacaaagtaaggtttctgtttctgtaattacccgtcgtaaacctatacaataatatttattgacaaagcttcttatattcaagttattttaacaatgacttaattatgaaatgaactaagtaagctaaagtgaatattcattgagaatgaaatatgatatttagcgaagggaaggagaatctttggtgtcatcgtaattttttggtatcactctagatcatatataaagtagttgtatatttagattccccgattgtattccctaagttaagaaattctcttgagcatccaccatatactatgatacatgactttggctaagctcaaaaagactatctcaatgatggccctccatggattctccacctatataagccacggctaaagaaaaattgcttggccaagttgtcttttacctttggcatgatgcaaaaaacatttgatattctttctgtgtgaaccactgctacgagtaatatgttcttagagatcatgttttctttttgttcttcctttaattttctatttgaagatttgtcatcagttagaggtcatcggtaggatgatagatgttctcagcaacttgtgttgccagaataatatgattgccaatggagtatttttaagattcttggagatgtaagagttgtttctgtccatacatcactcttctcatgtcactaaggtcattgattgtttccatgtgctatatcgcaaattgctccaattttaactatgtgatccagaggaatgtttgacaaggaaagaattgcaaagttgaagaagggagttctaattgtaaacaatgctcgaggagcaattatggacactcaaccagttgttgatgcttgtaacagcggtcatattgcaggatacagtgcagatgtttggtacccacaaccagctcccaaggaccatctatggcgttacatgccaaaccaagctatgactcctcacatttctgggactaccattgatgcacagttgaggtatgcagctggaacaaaggatatgttggacaggtacttcaagggtgaggatttccctgctgaaaattacattgtcaaggatggggaattggcacctcagtatcgctaaattatttatgtatagagttgtgtctagatttctgtgttaaataaactggcaagccgtgtcttcaataagctgataaaattggctactttatgttcttctagaactctaatgcagtttttctccgggttagctgtaacttttgtgatggaaacatatgtcctcttctgtgatggaggtctatgtatgatcctccagtgtctttcttgagtctataactgaacttccttgctgtggtagttgtactggtgttcctggacattttatgttttaaaaaaaattatcttcttgtttgctagtatttgttgcagtcgctaggttaatcttttctacgacgccaggaaaaacttggcagaaataatgaaatgatgtgaaacagaatttgacatcacagtatattttgctttattgggaagaaaagccgacttcatcagtctggaacttcagatttttaaacgacctctttcttcacatacaagcgaataaatgcgatatatgcgccatttgacacccaagttggagtggttcattttacagttacgcttttttgtctataataaaaaagtcaattagtatataacatgtttgaattagatcttaaatctaattcacactccaaaagctagttctagttcaaaaggaggaattttcaagccttaataaggagtttactcattttcgacgtgagactgtcgtcattaacattacagttatagtaataggtaatttttgaatacaaatcagagccactatatctttcaagtgcaagtagaaaatgcagactgatcacaaaagaaagagagcaggcagcatacacatgcaatgttttttaattagttggcgacattgtgcgaagaagatttgtcattcatgacatgtggctgtgatttcctataccgaatgtttgtgggataatcttcctgttggtgttagtcaccagtacctaaaatttactttaaaaatgatgataaatttcatgcctcactgattcaaactgttttgcttaagaaattcaaggtctttcatttgcatctgaactgcttcttttgataattgcttgggctcatatttgatttcttcagttccatctgccattctctttgccttctctttgacaatgatttctaccttttgccgcccgactgtaggaaagacagcattaagcatggtacttagcagtttttcatcttcttcatcaatcagatcccttccatagcaacacacatgtatagcttcaagagctttctcagcacgaaattccatggggattgtaggtgctggagctcccaactttgatcgcttctccacgactaaaggaatcaatgcgagcaaaaatggtactgggtataacactggaccataaacgagagttcaaatataagtgtgatatatggctatcaaaccgtgcacattctgtgcttggtgctaaatctaatgaagcccgcaatgggatagctgcaaacataaatttactcgatatactattgtaagcaagcttcccaataagagttaggcagagctatgctgcttgaatcgtccaagaatactgtctgcatgtgtcgatactctaaaatatatgcagttttggaggattcgaacaacatggaggcagagttctaagtaccacatcaaaagaatgaagcataaacagaagttgaagtatgcctcaaagacagtatccgagtaagtatgctataaatttactgataagcattgaaagtaaggtaacataaatgaaaagaagctaaaaatcggtggcaaatgaaatcttacgaacctcccttgcttcattcatcattgcgatgaagttctgttcttcaaattcaatatcatttgctaaactaagccttgctaccccttccaaaatttcctcagatttgagtaaaccagctcctactgcagctaaccaacaacacagtagcacatacagaggatcccctgtctatcaataaggcaaggaaaatcaaggtcaataatctatagataaaaccaagtcacttgattgcaagtaaaaattaccttgccacgtcgatctcgaaattcataaaaagctcttgaatcattaatggaacacttgttaccgactcgcctcctgaactccgcaaaatcaataaaatcgcctccaacaccaccttcctcattgacaattctggctatgagaccaaaaacaggcagtgaaccgatgaccttattagcaaaactagaaattggatttgtggtctcatccatataagccttgacgagcaagaccgcaccgccattggagttggaattatttcttctggatggaaatgtatagaaacgtcgaaagtaacgaagagagggagagattgagttacagtagatggaggaggaagaagaaggagagtggagagaggagacaaccaccatagtgttacatgtggtggacgttcaatctttgttttgatatttgccccttttgtttatcttttcggaatctatctcgctatgagcttcattatctaactctcaaataataataatattagtaatacagttaaaaaaattaaaatcatctactttttcgtagcccttttgattaaattaaatttatttaaatacttaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E02.1" temp_strand="+" temp_description="C02HBa0236E02.1  AC215430.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E02 sequenced_by:kribb upload_account_name:korea">
        <position start="67578" stop="73970"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67870" g_stop="69171" g_length="1302"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1301" r_length="1301" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69172" i_stop="69406" i_length="235">
            <donor d_prob="0.983" d_score="0.98"/>
            <acceptor a_prob="0.964" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69407" g_stop="69519" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="1302" r_stop="1414" r_length="113" r_score="0.991"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="69520" i_stop="69630" i_length="111">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="69631" g_stop="72073" g_length="2443"/>
          <reference_exon_boundary r_type="cDNA" r_start="1415" r_stop="3859" r_length="2445" r_score="0.995"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="72074" i_stop="73417" i_length="1344">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="73418" g_stop="73670" g_length="253"/>
          <reference_exon_boundary r_type="cDNA" r_start="3860" r_stop="4112" r_length="253" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E02.1" gen_strand="+" ref_id="SGN-U579029" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>4111</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U579029" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67870" e_stop="69171"/>
          <exon e_start="69407" e_stop="69519"/>
          <exon e_start="69631" e_stop="72073"/>
          <exon e_start="73418" e_stop="73670"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAAGTAAGGTTTCTGTTTCTGTAATTACCCGTCGTAAACCTATACAATAATATTTATTGACAAAGCTTCTTATATTCAAGTTATTTTAACAATGACTTAATTATGAAATGAACTAAGTAAGCTAAAGTGAATATTCATTGAGAATGAAATATGATATTTAGCGAAGGGAAGGAGAATCTTTGGTGTCATCGTAATTTTTTGGTATCACTCTAGATCATATATAAAGTAGTTGTATATTTAGATTCCCCGATTGTATTCCCTAAGTTAAGAAATTCTCTTGAGCATCCACCATATACTATGATACATGACTTTGGCTAAGCTCAAAAAGACTATCTCAATGATGGCCCTCCATGGATTCTCCACCTATATAAGCCACGGCTAAAGAAAAATTGCTTGGCCAAGTTGTCTTTTACCTTTGGCATGATGCAAAAAACATTTGATATTCTTTCTGTGTGAACCACTGCTACGAGTAATATGTTCTTAGAGATCATGTTTTCTTTTTGTTCTTCCTTTAATTTTCTATTTGAAGATTTGTCATCAGTTAGAGGTCATCGGTAGGATGATAGATGTTCTCAGCAACTTGTGTTGCCAGAATAATATGATTGCCAATGGAGTATTTTTAAGATTCTTGGAGATGTAAGAGTTGTTTCTGTCCATACATCACTCTTCTCATGTCACTAAGGTCATTGATTGTTTCCATGTGCTATATCGCAAATTGCTCACAATTTTAACTATGTGATCCAGAGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAGGTATTTTAACATAACTTGAACACATCATCCAGAGATGAGCCCTCAGCCTTAATATCAATTGAACACACCATTATATTTTTTTCTTCAATTCTTGCTTGTTTCTTTTCTTCAATATATTTTATCGACATTTGGAAGTAGTTCCATATCTTGTGGAATTGCCGAATCCTTTGAAGAAAGAAGTACTTCTAAAACTATATTGAGTTCTTTTCTTTCGGTTATTTCCCCCCAAATTTAGGATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAGGTTTGTAAATACTCTGTTTCTCTAATTTCTTTAGGCTTTGCTTTTTCTTTACTTTCACGACATTATAATTGCGATTAAACTGAGAGAAGCTTGTTACTTTCAATTTCGCAGTTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGTTGTGTCTAGATTTCTGTGTTAAATAAACTGGCAAGCCGTGTCTTCAATAAGCTGATAAAATTGGCTACTTTATGTTCTTCTAGAACTCTAATGCAGTTTTTCTCCGGGTTAGCTGTAACTTTTGTGATGGAAACATATGTCCTCTTCTGTGATGGAGGTCTATGTATGATCCTCCAGTGTCTTTCTTGAGTCTATAACTGAACTTCCTTGCTGTGGTAGTTGTACTGGTGTTCCTGGACATTTTATGTTTTAAAAAAAATTATCTTCTTGTTTGCTAGTATTTGTTGCAGTCGCTAGGTTAATCTTTTCTACGACGCCAGGAAAAACTTGGCAAAAATAATGAAATGATGTGAAACAGAATTTGACATCACAGTATATTTTGCTTTATTGGGAAGAAAAGCCGACTTCATCAGTCTGGAACTTCAGATTTTTAAACGACCTCTTTCTTCACATACAAGCGAATAAATGCGATATATGCGCCATTTGACACCCAAGTTGGAGTGGTTCATTTTACAGTTACGCTTTTTTGTCTATAATAAAAAAGTCAATTAGTATATAACATGTTTGAATTAGATCTTAAATCTAATTCACACTCCAAAAGCTAGTTCTAGTTCAAAAGGAGGAATTTTCAAGCCTTAATAAGGAGTTTACTCATTTTCGACGTGAGACTGTCGTCATTAACATTACAGTTATAGTAATAGGTAATTTTTGAATACAAATCAGAGCCACTATATCTTTCAAGTGCAAGTAGAAAATGCAGACTGATCACAAAAGAAAGAGAGCAGGCAGCATACACATGCAATGTTTTTTAATTAGTTGGCGACATTGTGCGAAGAAGATTTGTCATTCATGACATGTGGCTGTGATTTCCTATACCGAATGTTTGTGGGATAATCTTCCTGTTGGTGTTAGTCACCAGTACCTAAAATTTACTTTAAAAATGATGATAAATTTCATGCCTCACTGATTCAAACTGTTTTGCTTAAGAAATTCAAGGTCTTTCATTTGCATCTGAACTGCTTCTTTTGATAATTGCTTGGGCTCATATTTGATTTCTTCAGTTCCATCTGCCATTCTCTTTGCCTTCTCTTTGACAATGATTTCTACCTTTTGCCGCCCGACTGTAGGAAAGACAGCATTAAGCATGGTACTTAGCAGTTTTTCATCTTCTTCATCAATCAGATCCCTTCCATAGCAACACACATGTATAGCTTCAAGAGCTTTCTCAGCACGAAATTCCATGGGGATTGTAGGTGCTGGAGCTCCCAACTTTGATCGCTTCTGCACGAGTAAAGGAA--AATGTTAGCAAAAATGGTACTGGGTATAACACTGGACCATAAACGAGAGTTCAAATATAAGTGTGATATATGGCTATCAAACCGTGCACATTCTGTGCTTGGTGCTAAATCTAATGAAGCCCGTAATGGGATAGCTGCAAACATAAATTTACTCGATATACTATTGTAAGCAAGCTTCCCAATAAGAGTTAGGCAGAGCTATGCTGCTTGAATCGTCCAAGAATACTGTCTGCATGTGTCGATACTCTAAAATATATGCAGTTTTGGAGGATTCGAACAACATGGAGGCAGAGTTCTAAGTACCACATCAAAAGAATGAAGCATAAACAGAAGTTGAAGTATGCCTCAAAGACAGTATCCGAGTAAGTATGCTATAAATTTACTGATAAGCATTGAAAGTAAGGTAACATAAATGAAAAGAAGCTAAAAATCGTTGGCAAATGAAATCTTACGAACCTCCCTTGCTTCATTCATCATTGCGATGAAGTTTTGTTCTTCAAATTCAATATCATTTGCTAAACTAAGCCTTGCTACCCCTTCCAAAATTTCCTCAGATTTGAGTAAACCAGCTCCTACTGCAGCTAACCAACAACACAGTAGCACATACAGAGGATCCCCTGTCTATCAATAAGGCAAGGAAAATCAAGGTCAATAATCTATAGATAAAACCAAGTCACTTGATTGCAAGTAAAAATTACCTTGCCACGTCGATCTCGAAATTCATAAAAAGCTCTTGAATCATTAATGGAACACTTGTTACCGACTCGCCTCCTGAACTCCGCAAAATCAATAAAATCGCCTCCAACACCACCTTCCTCATTGACAATTCTGGCTATGAGACCAAAAACAGGCAGTGAACCGATGACCTTATTAGCAAAACTAGAAATTGGATTTGTGGTCTCATCCATATAAGCCTTGACGAGCAAGACCGCACCGCCATTGGAGTTGGAATTATTTCTTCTGGATGGAAATGTATAGAAACGTCGAAAGTAACGAAGAGAGGGAGAGATTGAGTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAGAGCTTTGAACCGGGGATGACGGTCTCCCTCGTTGCCCGGCAACATGGTGTAGCAGCCAGCCAGTTATTTCTCTGGCGTAAGCAATACCAGGAAGGAAGTCTTACTGCTGTCGCCGCCGGAGAACAGGTTGTTCCTGCCTCTGAACTTGCTGCCGCCATGAAGCAGATTAAAGAACTCCAGCGCCTGCTCGGCAAGAAAACGATGGAAAATGAACTCCTCAAAGAAGCCGTTGAATATGGACGGGCAAAAAAGTGGATAGCGCACGCGCCCTTATTGCCCGGGGAATGGGGGAGTAAGCTTAGTCAGCCGTTGTCCTCCGGGTGTCGCGTGCGCAGTTGCACGTCATTCTCAGACGAACCGATGGACTGGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTCTCCGTATACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGGTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACCTGCTGTACCGCCATCGAAACCGGGCACATACAGGGCAGAGTGGCCGTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGTTCGAGTTCTGCTGTGATAACGGAGAGAGACTGCGTGTCCACGTTCGCGCTGGACTGCTGTGATCGTGAGGCACTGCACTGGGCGGTCACTACCGGCGGCTTCAACAGTGAAACAGTACAGGACGTCATGCTGGGAGCGGTGGAACGCCGCTTCGGCAACGATCTTCCGTCGTCTCCAGTGGAGTGGCTGACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGATGTTGGGACTTGAACCGAAGAACACGGCGGTGCGGAGTCCGGAGAGTAACGGAATAGCAGAGAGCTTCGTGAAAACGATAAAGCGTGACTACATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCATTGAGTTACAGTAGATGGAGGAGGAAGAAGAAGGAGAGTGGAGAGAGGAGACAACCACCATAGTGTTACATGTGGTGGACGTTCAATCTTTGTTTTGATATTTGCCCCTTTTGTTTATCTTTTCGGAATCTATCTCGCTATGAGCTTCATTATCTAACTCTCAAATAATAATAATATTAGTAATACAGTTAAAAAAATTAAAATCATCTACTTTTTCGTAGCCCTTTTGATTAAATTAAATTTATTTAAATACTTAA</genome_strand>
        <mrna_strand>TGCCTTAGGCTGGAATTGGATCACATCATGTTGGTCTGAAAGCTGGTGGTGCTGTTGGATTGACAGTGGCACAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCTCACAGAGCTTATGATTTGGAAGGCAATACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAACCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAAGTAAGGTTTCTGTTTCTGTAATTACCCGTCGTAAACCTATACAATAATATTTATTGACAAAGCTTCTTATATTCAAGTTATTTTAACAATGACTTAATTATGAAATGAACTAAGTAAGCTAAAGTGAATATTCATTGAGAATGAAATATGATATTTAGCGAAGGGAAGGAGAATCTTTGGTGTCATCGTAATTTTTTGGTATCACTCTAGATCATATATAAAGTAGTTGTATATTTAGATTCCCCGATTGTATTCCCTAAGTTAAGAAATTCTCTTGAGCATCCACCATATACTATGATACATGACTTTGGCTAAGCTCAAAAAGACTATCTCAATGATGGCCCTCCATGGATTCTCCACCTATATAAGCCACGGCTAAAGAAAAATTGCTTGGCCAAGTTGTCTTTTACCTTTGGCATGATGCAAAAAACATTTGATATTCTTTCTGTGTGAACCACTGCTACGAGTAATATGTTCTTAGAGATCATGTTTTCTTTTTGTTCTTCCTTTAATTTTCTATTTGAAGATTTGTCATCAGTTAGAGGTCATCGGTAGGATGATAGATGTTCTCAGCAACTTGTGTTGCCAGAATAATATGATTGCCAATGGAGTATTTTTAAGATTCTTGGAGATGTAAGAGTTGTTTCTGTCCATACATCACTCTTCTCATGTCACTAAGGTCATTGATTGTTTCCATGTGCTATATCGCAAATTGCTC-CAATTTTAACTATGTGATCCAGAGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAACCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAG...........................................................................................................................................................................................................................................GATACAGTGCAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAG...............................................................................................................TTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGTTGTGTCTAGATTTCTGTGTTAAATAAACTGGCAAGCCGTGTCTTCAATAAGCTGATAAAATTGGCTACTTTATGTTCTTCTAGAACTCTAATGCAGTTTTTCTCCGGGTTAGCTGTAACTTTTGTGATGGAAACATATGTCCTCTTCTGTGATGGAGGTCTATGTATGATCCTCCAGTGTCTTTCTTGAGTCTATAACTGAACTTCCTTGCTGTGGTAGTTGTACTGGTGTTCCTGGACATTTTATGTTTTAAAAAAAATTATCTTCTTGTTTGCTAGTATTTGTTGCAGTCGCTAGGTTAATCTTTTCTACGACGCCAGGAAAAACTTGGCAGAAATAATGAAATGATGTGAAACAGAATTTGACATCACAGTATATTTTGCTTTATTGGGAAGAAAAGCCGACTTCATCAGTCTGGAACTTCAGATTTTTAAACGACCTCTTTCTTCACATACAAGCGAATAAATGCGATATATGCGCCATTTGACACCCAAGTTGGAGTGGTTCATTTTACAGTTACGCTTTTTTGTCTATAATAAAAAAGTCAATTAGTATATAACATGTTTGAATTAGATCTTAAATCTAATTCACACTCCAAAAGCTAGTTCTAGTTCAAAAGGAGGAATTTTCAAGCCTTAATAAGGAGTTTACTCATTTTCGACGTGAGACTGTCGTCATTAACATTACAGTTATAGTAATAGGTAATTTTTGAATACAAATCAGAGCCACTATATCTTTCAAGTGCAAGTAGAAAATGCAGACTGATCACAAAAGAAAGAGAGCAGGCAGCATACACATGCAATGTTTTTTAATTAGTTGGCGACATTGTGCGAAGAAGATTTGTCATTCATGACATGTGGCTGTGATTTCCTATACCGAATGTTTGTGGGATAATCTTCCTGTTGGTGTTAGTCACCAGTACCTAAAATTTACTTTAAAAATGATGATAAATTTCATGCCTCACTGATTCAAACTGTTTTGCTTAAGAAATTCAAGGTCTTTCATTTGCATCTGAACTGCTTCTTTTGATAATTGCTTGGGCTCATATTTGATTTCTTCAGTTCCATCTGCCATTCTCTTTGCCTTCTCTTTGACAATGATTTCTACCTTTTGCCGCCCGACTGTAGGAAAGACAGCATTAAGCATGGTACTTAGCAGTTTTTCATCTTCTTCATCAATCAGATCCCTTCCATAGCAACACACATGTATAGCTTCAAGAGCTTTCTCAGCACGAAATTCCATGGGGATTGTAGGTGCTGGAGCTCCCAACTTTGATCGCTTCTCCACGACTAAAGGAATCAATGCGAGCAAAAATGGTACTGGGTATAACACTGGACCATAAACGAGAGTTCAAATATAAGTGTGATATATGGCTATCAAACCGTGCACATTCTGTGCTTGGTGCTAAATCTAATGAAGCCCGCAATGGGATAGCTGCAAACATAAATTTACTCGATATACTATTGTAAGCAAGCTTCCCAATAAGAGTTAGGCAGAGCTATGCTGCTTGAATCGTCCAAGAATACTGTCTGCATGTGTCGATACTCTAAAATATATGCAGTTTTGGAGGATTCGAACAACATGGAGGCAGAGTTCTAAGTACCACATCAAAAGAATGAAGCATAAACAGAAGTTGAAGTATGCCTCAAAGACAGTATCCGAGTAAGTATGCTATAAATTTACTGATAAGCATTGAAAGTAAGGTAACATAAATGAAAAGAAGCTAAAAATCGGTGGCAAATGAAATCTTACGAACCTCCCTTGCTTCATTCATCATTGCGATGAAGTTCTGTTCTTCAAATTCAATATCATTTGCTAAACTAAGCCTTGCTACCCCTTCCAAAATTTCCTCAGATTTGAGTAAACCAGCTCCTACTGCAGCTAACCAACAACACAGTAGCACATACAGAGGATCCCCTGTCTATCAATAAGGCAAGGAAAATCAAGGTCAATAATCTATAGATAAAACCAAGTCACTTGATTGCAAGTAAAAATTACCTTGCCACGTCGATCTCGAAATTCATAAAAAGCTCTTGAATCATTAATGGAACACTTGTTACCGACTCGCCTCCTGAACTCCGCAAAATCAATAAAATCGCCTCCAACACCACCTTCCTCATTGACAATTCTGGCTATGAGACCAAAAACAGGCAGTGAACCGATGACCTTATTAGCAAAACTAGAAATTGGATTTGTGGTCTCATCCATATAAGCCTTGACGAGCAAGACCGCACCGCCATTGGAGTTGGAATTATTTCTTCTGGATGGAAATGTATAGAAACGTCGAAAGTAACGAAGAGAGGGAGAGATTGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACAGTAGATGGAGGAGGAAGAAGAAGGAGAGTGGAGAGAGGAGACAACCACCATAGTGTTACATGTGGTGGACGTTCAATCTTTGTTTTGATATTTGCCCCTTTTGTTTATCTTTTCGGAATCTATCTCGCTATGAGCTTCATTATCTAACTCTCAAATAATAATAATATTAGTAATACAGTTAAAAAAATTAAAATCATCTACTTTTTCGTAGCCCTTTTGATTAAATTAAATTTATTTAAATACTTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U579752" ref_strand="+" ref_description="SGN-U579752 Tomato 200607#2 [32 ESTs aligned] (*GB) gi|33338872|gb|AAQ14193.1|AF238305_1 (e_value=2e-132) calcium; (*ATH) AT3G55250.1 (e_value=5e-90) | Symbol: None | expressed protein, predicted pectate-lyase, Arabidopsis thaliana, PIR:T06728 | chr3:20490266-20491611 FORWARD | Aliases: T26I12.130; ">
      <seq>caaatatcaaaacaaagattgaacgtccaccacatgtaacactatggtggttgtctcctctctccactctccttcttcttcctcctccatctactgtaactcaatctctccctctcttcgttactttcgacgtttctatacatttccatccagaagaaataattccaactccaatggcggtgcggtcttgctcgtcaaggcttatatggatgagaccacaaatccaatttctagttttgctaataaggtcatcggttcactgcctgtttttggtctcatagccagaattgtcaatgaggaaggtggtgttggaggcgattttattgattttgcggagttcaggaggcgagtcggtaacaagtgttccattaatgattcaagagctttttatgaatttcgagatcgacgtggcaagacaggggatcctctgtatgtgctactgtgttgttggttagctgcagtaggagctggtttactcaaatctgaggaaattttggaaggggtagcaaggcttagtttagcaaatgatattgaatttgaagaacaaaacttcatcgcaatgatgaatgaagcaagggagaagcgatcaaagttgggagctccagcacctacaatccccatggaatttcgtgctgagaaagctcttgaagctatacatgtgtgttgctatggaagggatctgattgatgaagaagatgaaaaactgctaagtaccatgcttaatgctgtctttcctacagtcgggcggcaaaaggtagaaatcattgtcaaagagaaggcaaagagaatggcagatggaactgaagaaatcaaatatgagcccaagcaattatcaaaagaagcagttcagatgcaaatgaaagaccttgaatttcttaagcaaaacagtttgaatcagtgaggcatgaaatttatcatcatttttaaagtaaattttaggtactggtgactaacaccaacaggaagattatccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E02.1" temp_strand="-" temp_description="C02HBa0236E02.1  AC215430.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E02 sequenced_by:kribb upload_account_name:korea">
        <position start="73817" stop="70350"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73517" g_stop="73423" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="95" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="73422" i_stop="72080" i_length="1343">
            <donor d_prob="0.962" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72079" g_stop="71759" g_length="321"/>
          <reference_exon_boundary r_type="cDNA" r_start="96" r_stop="415" r_length="320" r_score="0.994"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="71758" i_stop="71682" i_length="77">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.925" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="71681" g_stop="71517" g_length="165"/>
          <reference_exon_boundary r_type="cDNA" r_start="416" r_stop="580" r_length="165" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="71516" i_stop="71044" i_length="473">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="71043" g_stop="70650" g_length="394"/>
          <reference_exon_boundary r_type="cDNA" r_start="581" r_stop="974" r_length="394" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E02.1" gen_strand="-" ref_id="SGN-U579752" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>975</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U579752" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73517" e_stop="73423"/>
          <exon e_start="72079" e_stop="71759"/>
          <exon e_start="71681" e_stop="71517"/>
          <exon e_start="71043" e_stop="70650"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAATATCAAAACAAAGATTGAACGTCCACCACATGTAACACTATGGTGGTTGTCTCCTCTCTCCACTCTCCTTCTTCTTCCTCCTCCATCTACTGTAACTCAATGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCAAGGTTCTTTGCTGCCGTTAACCCGTCTGGTTTGGGCATGATACTGATGTAGTCACGCTTTATCGTTTTCACGAAGCTCTCTGCTATTCCGTTACTCTCCGGACTCCGCACCGCCGTGTTCTTCGGTTCAAGTCCCAACATCCGGGCGAACTGGCGTGTTTCATTAGCCCGGTAGCATGAACCATTATCCGTCAGCCACTCCACTGGAGACGACGGAAGATCGTTGCCGAAGCGGCGTTCCACCGCTCCCAGCATGACGTCCTGTACTGTTTCACTGTTGAAGCCGCCGGTAGTGACCGCCCAGTGCAGTGCCTCACGATCACAGCAGTCCAGCGCGAACGTGGACACGCAGTCTCTCTCCGTTATCACAGCAGAACTCGAACCCGTCAGAGCACCATCGCTGATTGCTTTCTTTCACGGCCACTCTGCCCTGTATGTGCCCGGTTTCGATGGCGGTACAGCAGGTTTTCGCTCAAGCAACAGCGCATTCTGGCGCATGATCCGGTAAACACGTTTGGCATTGATCGCAGGCATACCATCAAGTTCTGCCTGTCTGCGAAGCAGCGCCCATACCCGACGATAACCATACGTTGGCAGCTCTCCGATAACATGGTGTATACGGAGAAGCACATCCGTATCATCAGTGTGACGACTGCGGCGGCCATCCATCCCAGTCCATCGGTTCGTCTGAGAATGACGTGCAACTGCGCACGCGACACCCGGAGGACAACGGCTGACTAAGCTTACTCCCCCATTCCCCGGGCAATAAGGGCGCGTGCGCTATCCACTTTTTTGCCCGTCCATATTCAACGGCTTCTTTGAGGAGTTCATTTTCCATCGTTTTCTTGCCGAGCAGGCGCTGGAGTTCTTTAATCTGCTTCATGGCGGCAGCAAGTTCAGAGGCAGGAACAACCTGTTCTCCGGCGGCGACAGCAGTAAGACTTCCTTCCTGGTATTGCTTACGCCAGAGAAATAACTGGCTGGCTGCTACACCATGTTGCCGGGCAACGAGGGAGACCGTCATCCCCGGTTCAAAGCTCTGCTGAACAATTGCGATCTTTTCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTACTCAATCTCTCCCTCTCTTCGTTACTTTCGACGTTTCTATACATTTCCATCCAGAAGAAATAATTCCAACTCCAATGGCGGTGCGGTCTTGCTCGTCAAGGCTTATATGGATGAGACCACAAATCCAATTTCTAGTTTTGCTAATAAGGTCATCGGTTCACTGCCTGTTTTTGGTCTCATAGCCAGAATTGTCAATGAGGAAGGTGGTGTTGGAGGCGATTTTATTGATTTTGCGGAGTTCAGGAGGCGAGTCGGTAACAAGTGTTCCATTAATGATTCAAGAGCTTTTTATGAATTTCGAGATCGACGTGGCAAGGTAATTTTTACTTGCAATCAAGTGACTTGGTTTTATCTATAGATTATTGACCTTGATTTTCCTTGCCTTATTGATAGACAGGGGATCCTCTGTATGTGCTACTGTGTTGTTGGTTAGCTGCAGTAGGAGCTGGTTTACTCAAATCTGAGGAAATTTTGGAAGGGGTAGCAAGGCTTAGTTTAGCAAATGATATTGAATTTGAAGAACAAAACTTCATCGCAATGATGAATGAAGCAAGGGAGGTTCGTAAGATTTCATTTGCCAACGATTTTTAGCTTCTTTTCATTTATGTTACCTTACTTTCAATGCTTATCAGTAAATTTATAGCATACTTACTCGGATACTGTCTTTGAGGCATACTTCAACTTCTGTTTATGCTTCATTCTTTTGATGTGGTACTTAGAACTCTGCCTCCATGTTGTTCGAATCCTCCAAAACTGCATATATTTTAGAGTATCGACACATGCAGACAGTATTCTTGGACGATTCAAGCAGCATAGCTCTGCCTAACTCTTATTGGGAAGCTTGCTTACAATAGTATATCGAGTAAATTTATGTTTGCAGCTATCCCATTACGGGCTTCATTAGATTTAGCACCAAGCACAGAATGTGCACGGTTTGATAGCCATATATCACACTTATATTTGAACTCTCGTTTATGGTCCAGTGTTATACCCAGTACCATTTTTGCTAACATTTTCCTTTACTCGTGCAGAAGCGATCAAAGTTGGGAGCTCCAGCACCTACAATCCCCATGGAATTTCGTGCTGAGAAAGCTCTTGAAGCTATACATGTGTGTTGCTATGGAAGGGATCTGATTGATGAAGAAGATGAAAAACTGCTAAGTACCATGCTTAATGCTGTCTTTCCTACAGTCGGGCGGCAAAAGGTAGAAATCATTGTCAAAGAGAAGGCAAAGAGAATGGCAGATGGAACTGAAGAAATCAAATATGAGCCCAAGCAATTATCAAAAGAAGCAGTTCAGATGCAAATGAAAGACCTTGAATTTCTTAAGCAAAACAGTTTGAATCAGTGAGGCATGAAATTTATCATCATTTTTAAAGTAAATTTTAGGTACTGGTGACTAACACCAACAGGAAGATTATCCC</genome_strand>
        <mrna_strand>CAAATATCAAAACAAAGATTGAACGTCCACCACATGTAACACTATGGTGGTTGTCTCCTCTCTCCACTCTCCTTCTTCTTCCTCCTCCATCTACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT-AACTCAATCTCTCCCTCTCTTCGTTACTTTCGACGTTTCTATACATTTCCATCCAGAAGAAATAATTCCAACTCCAATGGCGGTGCGGTCTTGCTCGTCAAGGCTTATATGGATGAGACCACAAATCCAATTTCTAGTTTTGCTAATAAGGTCATCGGTTCACTGCCTGTTTTTGGTCTCATAGCCAGAATTGTCAATGAGGAAGGTGGTGTTGGAGGCGATTTTATTGATTTTGCGGAGTTCAGGAGGCGAGTCGGTAACAAGTGTTCCATTAATGATTCAAGAGCTTTTTATGAATTTCGAGATCGACGTGGCAAG.............................................................................ACAGGGGATCCTCTGTATGTGCTACTGTGTTGTTGGTTAGCTGCAGTAGGAGCTGGTTTACTCAAATCTGAGGAAATTTTGGAAGGGGTAGCAAGGCTTAGTTTAGCAAATGATATTGAATTTGAAGAACAAAACTTCATCGCAATGATGAATGAAGCAAGGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCGATCAAAGTTGGGAGCTCCAGCACCTACAATCCCCATGGAATTTCGTGCTGAGAAAGCTCTTGAAGCTATACATGTGTGTTGCTATGGAAGGGATCTGATTGATGAAGAAGATGAAAAACTGCTAAGTACCATGCTTAATGCTGTCTTTCCTACAGTCGGGCGGCAAAAGGTAGAAATCATTGTCAAAGAGAAGGCAAAGAGAATGGCAGATGGAACTGAAGAAATCAAATATGAGCCCAAGCAATTATCAAAAGAAGCAGTTCAGATGCAAATGAAAGACCTTGAATTTCTTAAGCAAAACAGTTTGAATCAGTGAGGCATGAAATTTATCATCATTTTTAAAGTAAATTTTAGGTACTGGTGACTAACACCAACAGGAAGATTATCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U590880" ref_strand="+" ref_description="SGN-U590880 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|33338872|gb|AAQ14193.1|AF238305_1 (e_value=6e-58) calcium; (*ATH) AT3G55250.1 (e_value=1e-40) | Symbol: None | expressed protein, predicted pectate-lyase, Arabidopsis thaliana, PIR:T06728 | chr3:20490266-20491611 FORWARD | Aliases: T26I12.130; ">
      <seq>ctccctctcttcgttactttcgacgtttctatacatttccatccagaagaaataattccaactccaatggcggtgcggtcttgctcgtcaaggcttatatggatgagaccacaaatccaatttctagttttgctaataagggcatcggttcactgcctgtttttggtctcatagccagaattgtcaatgaagaaagtggtgttggaagcgattttattgattttgcggagttcaagaagcgaatcggtaacaagtgttccattaatgattcaagaactttttatgaatttccagaaccacctggcaagacaagggaacctctggatgtgctactggggtggtgggtaactgcaataagagctggtttactccaatctgaagaaattttggaaaggggagcaagggttaatttaacaaatgatattgaatttgaagaacaaaacttcctcgccatgatgaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E02.1" temp_strand="-" temp_description="C02HBa0236E02.1  AC215430.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E02 sequenced_by:kribb upload_account_name:korea">
        <position start="72366" stop="71228"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72066" g_stop="71759" g_length="308"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="308" r_length="308" r_score="0.961"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71758" i_stop="71682" i_length="77">
            <donor d_prob="0.999" d_score="0.90"/>
            <acceptor a_prob="0.925" a_score="0.80"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71681" g_stop="71528" g_length="154"/>
          <reference_exon_boundary r_type="cDNA" r_start="309" r_stop="462" r_length="154" r_score="0.877"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E02.1" gen_strand="-" ref_id="SGN-U590880" ref_strand="+">
        <total_alignment_score>0.933</total_alignment_score>
        <cumulative_length_of_scored_exons>462</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U590880" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72066" e_stop="71759"/>
          <exon e_start="71681" e_stop="71528"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCCCTCTCTTCGTTACTTTCGACGTTTCTATACATTTCCATCCAGAAGAAATAATTCCAACTCCAATGGCGGTGCGGTCTTGCTCGTCAAGGCTTATATGGATGAGACCACAAATCCAATTTCTAGTTTTGCTAATAAGGTCATCGGTTCACTGCCTGTTTTTGGTCTCATAGCCAGAATTGTCAATGAGGAAGGTGGTGTTGGAGGCGATTTTATTGATTTTGCGGAGTTCAGGAGGCGAGTCGGTAACAAGTGTTCCATTAATGATTCAAGAGCTTTTTATGAATTTCGAGATCGACGTGGCAAGGTAATTTTTACTTGCAATCAAGTGACTTGGTTTTATCTATAGATTATTGACCTTGATTTTCCTTGCCTTATTGATAGACAGGGGATCCTCTGTATGTGCTACTGTGTTGTTGGTTAGCTGCAGTAGGAGCTGGTTTACTCAAATCTGAGGAAATTTTGGAAGGGGTAGCAAGGCTTAGTTTAGCAAATGATATTGAATTTGAAGAACAAAACTTCATCGCAATGATGAATG</genome_strand>
        <mrna_strand>CTCCCTCTCTTCGTTACTTTCGACGTTTCTATACATTTCCATCCAGAAGAAATAATTCCAACTCCAATGGCGGTGCGGTCTTGCTCGTCAAGGCTTATATGGATGAGACCACAAATCCAATTTCTAGTTTTGCTAATAAGGGCATCGGTTCACTGCCTGTTTTTGGTCTCATAGCCAGAATTGTCAATGAAGAAAGTGGTGTTGGAAGCGATTTTATTGATTTTGCGGAGTTCAAGAAGCGAATCGGTAACAAGTGTTCCATTAATGATTCAAGAACTTTTTATGAATTTCCAGAACCACCTGGCAAG.............................................................................ACAAGGGAACCTCTGGATGTGCTACTGGGGTGGTGGGTAACTGCAATAAGAGCTGGTTTACTCCAATCTGAAGAAATTTTGGAAAGGGGAGCAAGGGTTAATTTAACAAATGATATTGAATTTGAAGAACAAAACTTCCTCGCCATGATGAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U571736" ref_strand="+" ref_description="SGN-U571736 Tomato 200607#2 [8 ESTs aligned] (*GB) gi|18421967|ref|NP_568580.1| (e_value=0) expressed protein [Arabidopsis thaliana]; (*ATH) AT5G40270.1 (e_value=0)  Symbol: None | metal-dependent phosphohydrolase HD domain-containing protein, similar to SP:Q60710 Interferon-gamma inducible protein MG11 {Mus musculus}; contains Pfam profile PF01966: HD domain | chr5:16110400-16114447 REVERSE | Aliases: MSN9.18, ... ; (*SWP) sp|Q60710|SAMH1_MOUSE (e_value=1e-62) SAM domain and HD domain-containing protein 1 OS=Mus musculus GN=Samhd1; ">
      <seq>gcggcctgtgtcgcttgctgctgcagcaatagaacagaaattaaaaaaacgagacatttgataatagtaattgaaataaagagactttgacggcactactatatcactactcacattctccttcccattttcgtgcaaatcaaatatattcttcctcctactctacgccagctgctctcctctctctttctctctcctttcggcacctcaaaagagtggtgaagtagagagcccaagggtgagtatgggagctttttcaaatgaagaacttagtttctcttccaatttcgacttcgcttcctctcaggatctcagattctctaagcaaatccatgacaacgttcacggcaacatctacatcgacccgctctacttgaagttcattgacacagaacaatttcaaaggcttcgtgatcttaaacaactaggtgtgacacacatggtctatccaggagcagtgcattctagatttgagcattcccttggagtgtattggcttgccaatgaagctgtccataagcttaaaacccaccaaggtatggagcttggaattgatcactttgatatacaaacagtgaaacttgcaggtcttctacatgatattggacatggaccttttagccacttgtttgaacgcgagtttcttcctcaagtttgcaatggattggactggtctcatgagcaaatgtctgtggacatgattgatcacattgttgatgagcgtcgtattgatattgattctggaaccattaaaagggtcaaggaaatgatacttgctagttccaagtttacgttgacaaaaagctcaagggagaagcagttcttatatgatattgtggctaatggtcgaaatggagtcgatgttgacaagtttgattacattgtccgagatagccgtgcgtgtgcagtaggatgcaattttcaatttgagaggttgatggaaactatgagagtattgggagatgagatatgttatcgagccaaagattatttaaccatccacaagttatttgccacacgagctgatctacacagaactgtttatactcacgctaaagtgaaggcaatagagcttatgattgtagatgcactagtgaaagcaaatgattatctacacatatcatcacatatagagcatccttctcaatactggaaggtcggcatggtctttttgttagcttcaacctccttaattcatggaaccatgaaaataatttctctgtgtatgtggaagtagttagatgacaccattttaaaaaccatcgagactgctccagacccggaactgaaggaatctagggatttgatccttcgtgtccgaaggagagatttgtaccagttctgtaatgagtatgctgtcccaagagacaaaatagagcatttcaaggatgtcacggcacatgatattgtctgttcgcagaaaagtagcagtgagacacttaatgaagaggatgttgctgtgaccaatgtcaggatagatctgacacgcgggaggcataatccgcttgaaagtatccattttttcaaggattatgaaagtgaggagaagttctctatacctgatgatcgcatcagccacttgctgccatcatcatatcaagatatgattgtgagagtctactccaaaaagccccacctggtggaagctatttctgatgcatttgaaaatttccagttaaagacttatggaataaaagcacaggttcatgcaacacctgagaagaaaaaacgccgtgtatgatatttccccagtcatcactacaaaatccacagtagatatatgtgattatagtatatctcaagcaacatattacggtccatttgtacagaagtctttaaatgacacgtgaaaggcctctcaagagttatactagagtttttgtagaaagttgctaccatttactggatatgataatatcctccgagtactctcaacaatttcttgtatcctagcattactcgaaaaatggatttcttggtataaccgacttctgaata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E02.1" temp_strand="+" temp_description="C02HBa0236E02.1  AC215430.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E02 sequenced_by:kribb upload_account_name:korea">
        <position start="73863" stop="81394"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="74162" g_stop="74375" g_length="214"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="214" r_length="214" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="74376" i_stop="74466" i_length="91">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="74467" g_stop="74619" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="215" r_stop="367" r_length="153" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="74620" i_stop="75586" i_length="967">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.915" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75587" g_stop="75624" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="368" r_stop="405" r_length="38" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="75625" i_stop="75858" i_length="234">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.964" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="75859" g_stop="75881" g_length="23"/>
          <reference_exon_boundary r_type="cDNA" r_start="406" r_stop="428" r_length="23" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="75882" i_stop="76746" i_length="865">
            <donor d_prob="0.991" d_score="0.00"/>
            <acceptor a_prob="0.908" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="76747" g_stop="76853" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="429" r_stop="535" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="76854" i_stop="76939" i_length="86">
            <donor d_prob="0.864" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="76940" g_stop="76991" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="536" r_stop="587" r_length="52" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="76992" i_stop="77077" i_length="86">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.938" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="77078" g_stop="77162" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="588" r_stop="672" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="77163" i_stop="77855" i_length="693">
            <donor d_prob="0.882" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="77856" g_stop="77946" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="673" r_stop="763" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="77947" i_stop="78745" i_length="799">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.768" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="78746" g_stop="78784" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="764" r_stop="802" r_length="39" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="78785" i_stop="78981" i_length="197">
            <donor d_prob="0.822" d_score="0.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="78982" g_stop="79049" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="803" r_stop="870" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="79050" i_stop="79142" i_length="93">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="79143" g_stop="79205" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="871" r_stop="933" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="79206" i_stop="79310" i_length="105">
            <donor d_prob="0.939" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="79311" g_stop="79366" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="934" r_stop="989" r_length="56" r_score="1.000"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="79367" i_stop="79446" i_length="80">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="79447" g_stop="79520" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="990" r_stop="1063" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="13">
          <gDNA_intron_boundary i_start="79521" i_stop="79652" i_length="132">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="14">
          <gDNA_exon_boundary g_start="79653" g_stop="79928" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="1064" r_stop="1339" r_length="276" r_score="1.000"/>
        </exon>
        <intron i_serial="14">
          <gDNA_intron_boundary i_start="79929" i_stop="80026" i_length="98">
            <donor d_prob="0.873" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="15">
          <gDNA_exon_boundary g_start="80027" g_stop="80107" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="1340" r_stop="1420" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="15">
          <gDNA_intron_boundary i_start="80108" i_stop="80177" i_length="70">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="16">
          <gDNA_exon_boundary g_start="80178" g_stop="80269" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="1421" r_stop="1512" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="16">
          <gDNA_intron_boundary i_start="80270" i_stop="80407" i_length="138">
            <donor d_prob="0.470" d_score="1.00"/>
            <acceptor a_prob="0.434" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="17">
          <gDNA_exon_boundary g_start="80408" g_stop="80423" g_length="16"/>
          <reference_exon_boundary r_type="cDNA" r_start="1513" r_stop="1528" r_length="16" r_score="1.000"/>
        </exon>
        <intron i_serial="17">
          <gDNA_intron_boundary i_start="80424" i_stop="80532" i_length="109">
            <donor d_prob="0.990" d_score="0.00"/>
            <acceptor a_prob="0.956" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="18">
          <gDNA_exon_boundary g_start="80533" g_stop="80643" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="1529" r_stop="1639" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="18">
          <gDNA_intron_boundary i_start="80644" i_stop="80735" i_length="92">
            <donor d_prob="0.408" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="19">
          <gDNA_exon_boundary g_start="80736" g_stop="81094" g_length="359"/>
          <reference_exon_boundary r_type="cDNA" r_start="1640" r_stop="1998" r_length="359" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E02.1" gen_strand="+" ref_id="SGN-U571736" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1998</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U571736" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="74162" e_stop="74375"/>
          <exon e_start="74467" e_stop="74619"/>
          <exon e_start="75587" e_stop="75624"/>
          <exon e_start="75859" e_stop="75881"/>
          <exon e_start="76747" e_stop="76853"/>
          <exon e_start="76940" e_stop="76991"/>
          <exon e_start="77078" e_stop="77162"/>
          <exon e_start="77856" e_stop="77946"/>
          <exon e_start="78746" e_stop="78784"/>
          <exon e_start="78982" e_stop="79049"/>
          <exon e_start="79143" e_stop="79205"/>
          <exon e_start="79311" e_stop="79366"/>
          <exon e_start="79447" e_stop="79520"/>
          <exon e_start="79653" e_stop="79928"/>
          <exon e_start="80027" e_stop="80107"/>
          <exon e_start="80178" e_stop="80269"/>
          <exon e_start="80408" e_stop="80423"/>
          <exon e_start="80533" e_stop="80643"/>
          <exon e_start="80736" e_stop="81094"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACGGCCTGTGTCGCTTGCTGCTGCAGCAATAGAACAGAAATTAAAAAAACGAGACATTTGATAATAGTAATTGAAATAAAGAGACTTTGACGGCACTACTATATCACTACTCACATTCTCCTTCCCATTTTCGTGCAAATCAAATATATTCTTCCTCCTACTCTACGCCAGCTGCTCTCCTCTCTCTTTCTCTCTCCTTTCGGCACCTCAAAAGGTATGTAAACGCGTACGCAATTACTCAACCGTTACCAATATTAGGTTTATTCATTTTGCAATTTTTCTGTTGTTTTCTCTGTGCTGTGTAGAGTGGTGAAGTAGAGAGCCCAAGGGTGAGTATGGGAGCTTTTTCAAATGAAGAACTTAGTTTCTCTTCCAATTTCGACTTCGCTTCCTCTCAGGATCTCAGATTCTCTAAGCAAATCCATGACAACGTTCACGGCAACATCTACATCGACCCGGTATGTTGCTGTCTCTCACTCTCTGCTGGCTAGTTAACTTTCTACATTTCTGTACATGCTTTGCTTATACCTGCACTGTTTGAATTTATAGGTAGTTAGTTTTTCTTTTGTTTTGGTTCTAAGAGCAATCACAAATGTGTATGCTACACTAGTTTTCTGTGCTATCTAATAGCCAAAAGTGTACTACTATTTTAAAGGAAATTGATAACTGTCAATGAGATAAATGAGAATTCAGAGCTATTTTAAGTTGCACTTCATACATTTTTATTATCCACAGTTTTCTATGGGTAAGTCAGTGCCGAAATTGTACTCGCAAATTAGCCAAAATTGTTAACCGTCAGACTGAATAAATGAGTTCAAAACTATTTTGAATATCAATTCATAAATTTTTGTTATCCACAATTTTCTTAAAATTTTTCAACAAATAAAAAAAAAGTTATCTAGAATGCTTGTGACTTCCAATGTTCAAAGAAAAAAGTTATCTAGAACGCTTGTGCCAAAATTTTGATTTTGTTTCATTTAATGAAACATTAGTGACCATGTGACCATAACAATTAACAAGAGAAGATGATTTTTTCTTCATTCATGATTTATTCGAGAAGCATATAAGGTCAAAATTCATAAGTTTGTTTTGCTGGTAAGAATGGATCGATCTTAAAAGAATGATAGCAACAAAGTGTTTTCCCACACTGTCCTTGGTTAACCTGTGACACAATCCTCTTTCAGCTTTCAGGCTAAAACATGTATTTTATCCAATAGATCAATGAGTTGTTATTCGCCCGTATTTATTTATTAGTATGTGATTGTTTACCAGGCAAGAGAGACACTGGGGTGTGGAGGTTACTGTTTTCTCATTGTGATATCAGATCTACACTCTTATTTTCACTATTCTTATACATTTTCTTTAACTTCTTATTGAGAGCTTTGTGCAAACTACTGGAAGTTTATTCTTTTCTGAACTTTGCAGCTCTACTTGAAGTTCATTGACACAGAACAATTTCAAAGGCAAGTTTCCTTATCATCTACTTCTAGTAGTGTAGTATTAGTGGTAGATCTCAGTTTATTGCATCCCTACTATAAATCTATGTACTTTTCGAGTATATGTTTTCATATTGGCTGCAATTTGCCTATGACCTGATAGTCATCTTTTATTTTCTTTTATTTTCGTTTGTATGTTCAACACTTTATCATGAGAGCTTTACTAGAATTATTGAACTGTTTTTTTCTTTTGTTTTCCAGGCTTCGTGATCTTAAACAACTAGGTAAGTTACTATCCTTGTTCCCTATTTGCATACCTGGTCGCAAGCTTGTTTATGCTAGAACATCAAATTTAGCCTTGTGATTCAAAATGGGATATGAAGAAGTTTTCTTATCTATCATCTACGTGTCCGCTGAAATGTGGCATTTAGTTCTTTCATATTGCAAAATTATTACTAGTAAAATGTGGGATGACATAAAAGATGTAACTAACCTGTATTTTATTTGTCTTAATGTGAGTTGTTTTGGTTATCAAAACTATGATAAAATTGATAACTATCTTTGCCTCTTAAATATGTTCTGACATTATCTGCAACTTTCAGCTTCACTTTGTGATTAGCGGTGACACTTGAACGTATAAATAGTCTGTTTCAACTTCAGTGGTATCTAAATTGTGGTTGCATTGGTGACTGTCGTCGGATCCTTGTAAGGTCTTACGATAATTGCAAAGATATCTTGTTTCTTAGTGTCCTATGAAGACATATCTATATAGGTTATTCAAATTCTGGATATTCGTGTAAATGATGACTTAAGAACTCAAAATTAGCTTTTAAAGCCCTGCATGCATATTTCCCATACAAGCCTCTTGCAGAGGCTGAAGCAAGCCCAAGGTTACAAGCCTAGATGCAAGTTACAAAAAGGCTATATGGTCTCCTATTGCTCAATGGGTAAATTTCACCCTCTCTTAAAATGAGATCCATGTTATCTGTTCAAGAAGTTTAAATCATCCATCTTCCAATCAGTACTTGATGCAGCCACTGGCTCTTACTGTTGTGCTCAATGTTGGTGGAAACATTGTAAGTCTAGGAGTTAACAGCCTGGTAGTGGCTTGAATTTGTTACTAATATGAGCTCTTGTATTCACTTTAAGGTGTGACACACATGGTCTATCCAGGAGCAGTGCATTCTAGATTTGAGCATTCCCTTGGAGTGTATTGGCTTGCCAATGAAGCTGTCCATAAGCTTAAAACCCACCAAGTATTAATTTGTTTATACTATTATTTTGGTTTCTCAACTTGACATACCTGAGGGGTTGTTATGTAATCCTAGTGTTCCTTTTACAGGGTATGGAGCTTGGAATTGATCACTTTGATATACAAACAGTGAAACTTGCAGGTAAGTGATATGGAATGCCTTGTGCATGGATGCTCTTCCTAATGCAGAATAATGAACTTCCATTCCATTGTGGTTGAATTTCTTAGGTCTTCTACATGATATTGGACATGGACCTTTTAGCCACTTGTTTGAACGCGAGTTTCTTCCTCAAGTTTGCAATGGATTGGACTGGTAATACTTTACTGTGGAATGAATTCTGTTATTTGGATACCTCTCAAGATATATGTCACATTCTCATGCTATTCAATTTTTTTTTTTTGAAATAGATGCTATTCAATTTTTTTTTTTTTTTTGAAATAGATGATATTCAATTTTTCTTGGCTAATAAGAGTTGAATTTTTGACATTTCCAATTCCCTGCAACGTACTTGATCTTAGCAAGAATCTTCTACTTTTAGTAAAGGCTTGAAGTGATCAAATAAGGAAGAAATGAATTTTTACTTTTTTAGAGTGGGAATGTTTTCATATTGGATTATTGGCAAGTCTTTAGGAAAGCTCTAGTTTTGCCCTTTTAACTTCAATAAATCAATATATTTCTATCCCAAACTAGTTGGACAGTTTTATCATTTAATCATAGAAAATAAAGTTATGCTTACAGCATACATTATGTGGTAGAAATCCTAAAGTTGTAATTAATCATGGTGGAGGACCTTGGCATATGATGATTTTGTTTAGTTGTTTCCAACTGTTTGTGTCTGCTCTTGCCTGCTGGTTGTAGTGTTGATATTGAGAAAATATTTCCTAGTTAACTATCTTAATGTTTTTGTTGTTCAAGTTTCTTTGAAGCTTCTTGCACTCATAATGAGGTGATGTCATTATTTTAGTATAGTGCATATTAATGACCTTGTCTTATGTTTTATTTTAGGTCTCATGAGCAAATGTCTGTGGACATGATTGATCACATTGTTGATGAGCGTCGTATTGATATTGATTCTGGAACCATTAAAAGGGTCAAGGTAAGATGAATTATTTTGATTTATGCTAGTTGATATCATACGAGATGAGAATGGTAATTTGCTTATAACATGTAGTATTTGTCAGTTTCAAAAAAAAAAAAAAATCCCTCTGTTTCAACTTGATTGTCCTATTTTGTAGAATGTACCAAATTGTCTTTTAAACTTGTGGTCTTAAACATGCTTTGTGAAAATTTATAATTAAAGAGTTGCCATAAAAGGGAAGAGTCATTTTTTTAAAAAATGGACTCAAACGGAAAGTAGGACTAACAAACTGAAATGGAGGGAGTATGAAGTATTTGTGCAAACTTGTATCGTCTCCAGAAGCAATTTGAATTTTAGGTGCTACTCAAGTATGGCAGACACGTGGAACTTTGTCAGCTATTGGCTGAAAGAGAATTTGTATGTGTGGAACTAAAACCTGCAAAGAGATAGCTTCTTTCATTAAATTCTCTTGAGCTACTAGTAAGAAAAAGCTTCTGCTGATTTGCAATGCTCTTCTTTACTATGCTTTTCAATGGTAACTAATGTCAAATTTTAGTGAACGAATTCTTTGACCAAAGTTATGACTATACGTTGGTTGAGATAATAAAGTTATTCACCATTCATGTGAGTTATTATTACTTCATGCAAATTCTATGACCAAGCTATGACTATGTTCGTTGAGATATTCATGTGAGTTACTATTCTTCATACAGCTAAAAGCAAATTGATTGTACATGCCACAAGTCATCATAAGACTTGTTTATATTGTAAGCAGGAAAAATTTTAAACGTGGCCTTTTGACCTCTATATTTGACAGGAAATGATACTTGCTAGTTCCAAGTTTACGTTGACAAAAGTAAGTCCTTCTCTTTCCATTTTCCAGCACATAGTTATCAGGAGGAAAAAAAACGTGATTCTTGCAATTTGACTGTTTTCATTTGACATGCATTTGCACTTCAATCTGGAATTTTTAGCTTTTTCTGCTCATCATTTCACATCATATTCCATTTTTGAAACTTGTGCACTGCTTCAATTTGATTGATTAATATGTAGAGCTCAAGGGAGAAGCAGTTCTTATATGATATTGTGGCTAATGGTCGAAATGGAGTCGATGTTGACAAGTTGGTTTCTAAACTATAGATTATTCTCTTCTCTTTTTTTTCCAACCTATTCTTTTCCAGCTTTCACCGGATGAAGCTTTCTTTGGTTTGCAGGTTTGATTACATTGTCCGAGATAGCCGTGCGTGTGCAGTAGGATGCAATTTTCAATTTGAGAGGTCTTCTCTTTCATCTTTTTGTCTATTGTGAATCGACATCTTTTCACAAATATCGAGAGAAAGGGAAAATAATTCTTTACCGTGAACTGTATTCATTTTCTGTAGGTTGATGGAAACTATGAGAGTATTGGGAGATGAGATATGTTATCGAGCCAAAGATTGTTAGTACTCAACTCTAACCAATATCTTATTTATTTTTGTTTGACTTCTGGTCTTATTATTTGTGTGGATAAATCCTCAGATTTAACCATCCACAAGTTATTTGCCACACGAGCTGATCTACACAGAACTGTTTATACTCACGCTAAAGTGAAGGTACATAGCTAATTTGACGAAGTTGTGCACTGATTTTCTCACCAGCATATCTGAAATGTGGAAGTTATCATTTTGTATGTCATATTTAAGTATGTACACATTTTCAATTTGTTTTCCCATATCATTGTACAGGCAATAGAGCTTATGATTGTAGATGCACTAGTGAAAGCAAATGATTATCTACACATATCATCACATATAGAGCATCCTTCTCAATACTGGAAGGTCGGCATGGTCTTTTTGTTAGCTTCAACCTCCTTAATTCATGGAACCATGAAAATAATTTCTCTGTGTATGTGGAAGTAGTTAGATGACACCATTTTAAAAACCATCGAGACTGCTCCAGACCCGGAACTGAAGGAATCTAGGGATTTGATCCTTCGTGTCCGAAGGAGAGATTTGTACCAGGTACTGAGGTTATCTAATGGGTGTTGATTAAGCAGGTTATATGAGTATTATGGGATGTTTGAAGTTTACGGGTTAATTCTTGTTTTTGCACATTGCAGTTCTGTAATGAGTATGCTGTCCCAAGAGACAAAATAGAGCATTTCAAGGATGTCACGGCACATGATATTGTCTGTTCGCAGGTAGCTAACATATAGTAGTCTGTTTTTGGGAGTCTTTAATATTTCTATGGTAATAATCATTATCTTACAGAAAAGTAGCAGTGAGACACTTAATGAAGAGGATGTTGCTGTGACCAATGTCAGGATAGATCTGACACGCGGGAGGCATAATCCGCTTGAAAGGTTGGTCAAAATGGGTCATCCTATGCAGTTCTTGCACTTGCATGCAATTTCTCTATCCCTCTCCTCCACTTTTATTATCATTCTGAACCTTTCAATTTATTTTCTTTGTATGCTGGTTGGACGTGTTGCCTCTGCCAGTATCCATTTTTTCAAGGTACAGACTATGGGTTCTACAAGTTTGATCATCAAAATCTATTACTTTTCTTGTCTGCATGTTTTTCATCTTTCCCGACCTCACTCTTAATGATTTGATTGAAATTCAGGATTATGAAAGTGAGGAGAAGTTCTCTATACCTGATGATCGCATCAGCCACTTGCTGCCATCATCATATCAAGATATGATTGTGAGAGTCTACTCCAAAAAGCCCCACCTGGTCTGTCCAGATAACGAGTATGCATTTGTTTTTTGCGTTCTTCTCCATCAAAGTCTGATCTCAGTTTTTTTGTATCCTACTCAAATTTTCAGGTGGAAGCTATTTCTGATGCATTTGAAAATTTCCAGTTAAAGACTTATGGAATAAAAGCACAGGTTCATGCAACACCTGAGAAGAAAAAACGCCGTGTATGATATTTCCCCAGTCATCACTACAAAATCCACAGTAGATATATGTGATTATAGTATATCTCAAGCAACATATTACAGTCCATTTGTACAGAAGTCTTTAAATGACACGTGAAAGGCCTCTCAAGAGTTATACTAGAGTTTTTGTAGAAAGTTGCTACCATTTACTGGATATGATAATATCCTCCGAGTACTCTCAACAATTTCTTGTATCCTAGCATTACTCGAAAAATGGATTTCTTGGTATAACCGACTTCTGAATA</genome_strand>
        <mrna_strand>GCGGCCTGTGTCGCTTGCTGCTGCAGCAATAGAACAGAAATTAAAAAAACGAGACATTTGATAATAGTAATTGAAATAAAGAGACTTTGACGGCACTACTATATCACTACTCACATTCTCCTTCCCATTTTCGTGCAAATCAAATATATTCTTCCTCCTACTCTACGCCAGCTGCTCTCCTCTCTCTTTCTCTCTCCTTTCGGCACCTCAAAAG...........................................................................................AGTGGTGAAGTAGAGAGCCCAAGGGTGAGTATGGGAGCTTTTTCAAATGAAGAACTTAGTTTCTCTTCCAATTTCGACTTCGCTTCCTCTCAGGATCTCAGATTCTCTAAGCAAATCCATGACAACGTTCACGGCAACATCTACATCGACCCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTACTTGAAGTTCATTGACACAGAACAATTTCAAAG..........................................................................................................................................................................................................................................GCTTCGTGATCTTAAACAACTAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGACACACATGGTCTATCCAGGAGCAGTGCATTCTAGATTTGAGCATTCCCTTGGAGTGTATTGGCTTGCCAATGAAGCTGTCCATAAGCTTAAAACCCACCAA......................................................................................GGTATGGAGCTTGGAATTGATCACTTTGATATACAAACAGTGAAACTTGCAG......................................................................................GTCTTCTACATGATATTGGACATGGACCTTTTAGCCACTTGTTTGAACGCGAGTTTCTTCCTCAAGTTTGCAATGGATTGGACTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTCATGAGCAAATGTCTGTGGACATGATTGATCACATTGTTGATGAGCGTCGTATTGATATTGATTCTGGAACCATTAAAAGGGTCAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATGATACTTGCTAGTTCCAAGTTTACGTTGACAAAA.....................................................................................................................................................................................................AGCTCAAGGGAGAAGCAGTTCTTATATGATATTGTGGCTAATGGTCGAAATGGAGTCGATGTTGACAA.............................................................................................GTTTGATTACATTGTCCGAGATAGCCGTGCGTGTGCAGTAGGATGCAATTTTCAATTTGAGAG.........................................................................................................GTTGATGGAAACTATGAGAGTATTGGGAGATGAGATATGTTATCGAGCCAAAGATT................................................................................ATTTAACCATCCACAAGTTATTTGCCACACGAGCTGATCTACACAGAACTGTTTATACTCACGCTAAAGTGAAG....................................................................................................................................GCAATAGAGCTTATGATTGTAGATGCACTAGTGAAAGCAAATGATTATCTACACATATCATCACATATAGAGCATCCTTCTCAATACTGGAAGGTCGGCATGGTCTTTTTGTTAGCTTCAACCTCCTTAATTCATGGAACCATGAAAATAATTTCTCTGTGTATGTGGAAGTAGTTAGATGACACCATTTTAAAAACCATCGAGACTGCTCCAGACCCGGAACTGAAGGAATCTAGGGATTTGATCCTTCGTGTCCGAAGGAGAGATTTGTACCAG..................................................................................................TTCTGTAATGAGTATGCTGTCCCAAGAGACAAAATAGAGCATTTCAAGGATGTCACGGCACATGATATTGTCTGTTCGCAG......................................................................AAAAGTAGCAGTGAGACACTTAATGAAGAGGATGTTGCTGTGACCAATGTCAGGATAGATCTGACACGCGGGAGGCATAATCCGCTTGAAAG..........................................................................................................................................TATCCATTTTTTCAAG.............................................................................................................GATTATGAAAGTGAGGAGAAGTTCTCTATACCTGATGATCGCATCAGCCACTTGCTGCCATCATCATATCAAGATATGATTGTGAGAGTCTACTCCAAAAAGCCCCACCTG............................................................................................GTGGAAGCTATTTCTGATGCATTTGAAAATTTCCAGTTAAAGACTTATGGAATAAAAGCACAGGTTCATGCAACACCTGAGAAGAAAAAACGCCGTGTATGATATTTCCCCAGTCATCACTACAAAATCCACAGTAGATATATGTGATTATAGTATATCTCAAGCAACATATTACGGTCCATTTGTACAGAAGTCTTTAAATGACACGTGAAAGGCCTCTCAAGAGTTATACTAGAGTTTTTGTAGAAAGTTGCTACCATTTACTGGATATGATAATATCCTCCGAGTACTCTCAACAATTTCTTGTATCCTAGCATTACTCGAAAAATGGATTTCTTGGTATAACCGACTTCTGAATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U571735" ref_strand="+" ref_description="SGN-U571735 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|157345484|emb|CAO14782.1| (e_value=3e-44) unnamed; (*ATH) AT5G40290.1 (e_value=6e-44)  Symbol: None | metal-dependent phosphohydrolase HD domain-containing protein, similar to SP:Q60710 Interferon-gamma inducible protein MG11 {Mus musculus}; contains Pfam profile PF01966: HD domain | chr5:16122487-16125729 REVERSE | Aliases: MSN9.190,... ; (*SWP) sp|Q9Y3Z3|SAMH1_HUMAN (e_value=2e-19) SAM domain and HD domain-containing protein 1 OS=Homo sapiens GN=SAMHD1; ">
      <seq>tcctactctacgccagctgctctcctctctctttctctctcctttcggcacctcaaaagagtggtgaagtagagagcccaagggtgagtatgggagctttttcaaatgaagaacttagtttctcttccaatttcgacttcgcttcctctcaggatctcagattctctaagcaaatccatgacaacgttcacggcaacatctacatcgacccggtatgttgctgtctctcactctctgctggctagttaactttctacatttctgtacatgctttgcttatacctgcactgtttgaatttataggtagttagtttttcttttgttttggttctaagagcaatcacaaatgtgtatgctacactagttttctgtgctatctaatagccaaaagtgtactactattttaaaggaaattgataactgtcaatgagataaatgagaattcagagctattttaagttgcacttcatacatttttattatccacagttttctatgggtaagtcagtgccgaaattgtactcgcaaattagccaaaattgttaaccgtcagactgaataaatgagttcaaaactattttgaatatcaattcataaatttttgttatccacaattttcttaaaatttttcaacaaataaaaaaaaagttatctagaatgcttgtgacttccaatgttcaaagaaaaaagttatctagaacgcttgtgccaaaattttgattttgtttcatttaatgaaacattagtgaccatgtgaccataacaattaacaagagaagatgattttttcttcattcatgatttattcgagaagcatataaggtcaaaattcataagtttgttttgctggtaagaatggatcgatcttaaaagaatgatagcaacaaagtgttttcccacactgtccttggttaacctgtgacacaatcctctttcagctttcaggctaaaacatgtattttatccaatagatcaatgagttgttattcgcccgtatttatttattagtatgtgattgtttaccaggcaagagagacactggggtgtggaggttactgttttctcattgtgatatcagatctacactcttattttcactattcttatacattttctttaacttcttattgagagctttgtgcaaactactggaagtttattcttttctgaactttgcagctctacttgaagttcattgacacagaacaatttcaaaggcttcgtgatcttaaacaactaggtaagttactatccttgttccctatttgcatacctggtcgcaagcttgtttatgctagaacatcaaatttagccttgtgattcaaaatgggatatgaagaagttttcttatctatcatctacgtgtccgctgaaatgtggcatttagttctttcatattgcaaaattattactagtaaaatgtgggatgacataaaagatgtaactaacctgtattttatttgtcttaatgtgagttgttttggttatcaaaactatgataaaattgataactatctttgcctcttaaatatgttctgacattatctgcaactttcagcttcactttgtgattagcggtgacacttgaacgtataaatagtctgtttcaacttcagtggtatctaaattgtggttgcattggtgactgtcgtcggatccttgtaaggtcttacgataattgcaaagatatcttgtttcttagtgtcctatgaagacatatctatataggttattcaaattctggatattcgtgtaaatgatgacttaagaactcaaaattagcttttaaagccctgcatgcatatttcccatacaagcctcttgcagaggctgaagcaagcccaaggttacaagcctagatgcaagttacaaaaaggctatatggtctcctattgctcaatgggtaaatttcaccctctcttaaaatgagatccatgttatctgttcaagaagtttaaatcatccatcttccaatcagtacttgatgcagccactggctcttactgttgtgctcaatgttggtggaaacattgtaagtctaggagttaacagcctggtagtggcttgaatttgttactaatatgagctcttgtattcactttaaggtgtgacacacatggtctatccaggagcagtgcattctagatttgagcattcccttggagtgtattggcttgccaatgaagctgtccataagcttaaaacccaccaaggtatggagcttggaattgatcactttgatatacaaacagtgaaacttgcaggtcttctacatgatattggacatggaccttttagccacttgtttgaacgcgagtttcttcctcaagtttgcaatggattggactggtctcatgagcaaatgtctgtggacatgattgatcacattgttgatgagcgtcgtattgatattgattctggaaccattaaaagggtcaaggtaagatgaattattttgatttatgctagttgatatcatacgagatgagaatggtaatttgcttata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E02.1" temp_strand="+" temp_description="C02HBa0236E02.1  AC215430.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E02 sequenced_by:kribb upload_account_name:korea">
        <position start="74017" stop="78313"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="74317" g_stop="74375" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="59" r_length="59" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="74376" i_stop="74466" i_length="91">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="74467" g_stop="75624" g_length="1158"/>
          <reference_exon_boundary r_type="cDNA" r_start="60" r_stop="1217" r_length="1158" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75625" i_stop="75858" i_length="234">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75859" g_stop="76853" g_length="995"/>
          <reference_exon_boundary r_type="cDNA" r_start="1218" r_stop="2212" r_length="995" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="76854" i_stop="76939" i_length="86">
            <donor d_prob="0.864" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="76940" g_stop="76991" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="2213" r_stop="2264" r_length="52" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="76992" i_stop="77077" i_length="86">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.938" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="77078" g_stop="77162" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="2265" r_stop="2349" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="77163" i_stop="77855" i_length="693">
            <donor d_prob="0.882" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="77856" g_stop="78013" g_length="158"/>
          <reference_exon_boundary r_type="cDNA" r_start="2350" r_stop="2507" r_length="158" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E02.1" gen_strand="+" ref_id="SGN-U571735" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>2507</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U571735" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="74317" e_stop="74375"/>
          <exon e_start="74467" e_stop="75624"/>
          <exon e_start="75859" e_stop="76853"/>
          <exon e_start="76940" e_stop="76991"/>
          <exon e_start="77078" e_stop="77162"/>
          <exon e_start="77856" e_stop="78013"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCTACTCTACGCCAGCTGCTCTCCTCTCTCTTTCTCTCTCCTTTCGGCACCTCAAAAGGTATGTAAACGCGTACGCAATTACTCAACCGTTACCAATATTAGGTTTATTCATTTTGCAATTTTTCTGTTGTTTTCTCTGTGCTGTGTAGAGTGGTGAAGTAGAGAGCCCAAGGGTGAGTATGGGAGCTTTTTCAAATGAAGAACTTAGTTTCTCTTCCAATTTCGACTTCGCTTCCTCTCAGGATCTCAGATTCTCTAAGCAAATCCATGACAACGTTCACGGCAACATCTACATCGACCCGGTATGTTGCTGTCTCTCACTCTCTGCTGGCTAGTTAACTTTCTACATTTCTGTACATGCTTTGCTTATACCTGCACTGTTTGAATTTATAGGTAGTTAGTTTTTCTTTTGTTTTGGTTCTAAGAGCAATCACAAATGTGTATGCTACACTAGTTTTCTGTGCTATCTAATAGCCAAAAGTGTACTACTATTTTAAAGGAAATTGATAACTGTCAATGAGATAAATGAGAATTCAGAGCTATTTTAAGTTGCACTTCATACATTTTTATTATCCACAGTTTTCTATGGGTAAGTCAGTGCCGAAATTGTACTCGCAAATTAGCCAAAATTGTTAACCGTCAGACTGAATAAATGAGTTCAAAACTATTTTGAATATCAATTCATAAATTTTTGTTATCCACAATTTTCTTAAAATTTTTCAACAAATAAAAAAAAAGTTATCTAGAATGCTTGTGACTTCCAATGTTCAAAGAAAAAAGTTATCTAGAACGCTTGTGCCAAAATTTTGATTTTGTTTCATTTAATGAAACATTAGTGACCATGTGACCATAACAATTAACAAGAGAAGATGATTTTTTCTTCATTCATGATTTATTCGAGAAGCATATAAGGTCAAAATTCATAAGTTTGTTTTGCTGGTAAGAATGGATCGATCTTAAAAGAATGATAGCAACAAAGTGTTTTCCCACACTGTCCTTGGTTAACCTGTGACACAATCCTCTTTCAGCTTTCAGGCTAAAACATGTATTTTATCCAATAGATCAATGAGTTGTTATTCGCCCGTATTTATTTATTAGTATGTGATTGTTTACCAGGCAAGAGAGACACTGGGGTGTGGAGGTTACTGTTTTCTCATTGTGATATCAGATCTACACTCTTATTTTCACTATTCTTATACATTTTCTTTAACTTCTTATTGAGAGCTTTGTGCAAACTACTGGAAGTTTATTCTTTTCTGAACTTTGCAGCTCTACTTGAAGTTCATTGACACAGAACAATTTCAAAGGCAAGTTTCCTTATCATCTACTTCTAGTAGTGTAGTATTAGTGGTAGATCTCAGTTTATTGCATCCCTACTATAAATCTATGTACTTTTCGAGTATATGTTTTCATATTGGCTGCAATTTGCCTATGACCTGATAGTCATCTTTTATTTTCTTTTATTTTCGTTTGTATGTTCAACACTTTATCATGAGAGCTTTACTAGAATTATTGAACTGTTTTTTTCTTTTGTTTTCCAGGCTTCGTGATCTTAAACAACTAGGTAAGTTACTATCCTTGTTCCCTATTTGCATACCTGGTCGCAAGCTTGTTTATGCTAGAACATCAAATTTAGCCTTGTGATTCAAAATGGGATATGAAGAAGTTTTCTTATCTATCATCTACGTGTCCGCTGAAATGTGGCATTTAGTTCTTTCATATTGCAAAATTATTACTAGTAAAATGTGGGATGACATAAAAGATGTAACTAACCTGTATTTTATTTGTCTTAATGTGAGTTGTTTTGGTTATCAAAACTATGATAAAATTGATAACTATCTTTGCCTCTTAAATATGTTCTGACATTATCTGCAACTTTCAGCTTCACTTTGTGATTAGCGGTGACACTTGAACGTATAAATAGTCTGTTTCAACTTCAGTGGTATCTAAATTGTGGTTGCATTGGTGACTGTCGTCGGATCCTTGTAAGGTCTTACGATAATTGCAAAGATATCTTGTTTCTTAGTGTCCTATGAAGACATATCTATATAGGTTATTCAAATTCTGGATATTCGTGTAAATGATGACTTAAGAACTCAAAATTAGCTTTTAAAGCCCTGCATGCATATTTCCCATACAAGCCTCTTGCAGAGGCTGAAGCAAGCCCAAGGTTACAAGCCTAGATGCAAGTTACAAAAAGGCTATATGGTCTCCTATTGCTCAATGGGTAAATTTCACCCTCTCTTAAAATGAGATCCATGTTATCTGTTCAAGAAGTTTAAATCATCCATCTTCCAATCAGTACTTGATGCAGCCACTGGCTCTTACTGTTGTGCTCAATGTTGGTGGAAACATTGTAAGTCTAGGAGTTAACAGCCTGGTAGTGGCTTGAATTTGTTACTAATATGAGCTCTTGTATTCACTTTAAGGTGTGACACACATGGTCTATCCAGGAGCAGTGCATTCTAGATTTGAGCATTCCCTTGGAGTGTATTGGCTTGCCAATGAAGCTGTCCATAAGCTTAAAACCCACCAAGTATTAATTTGTTTATACTATTATTTTGGTTTCTCAACTTGACATACCTGAGGGGTTGTTATGTAATCCTAGTGTTCCTTTTACAGGGTATGGAGCTTGGAATTGATCACTTTGATATACAAACAGTGAAACTTGCAGGTAAGTGATATGGAATGCCTTGTGCATGGATGCTCTTCCTAATGCAGAATAATGAACTTCCATTCCATTGTGGTTGAATTTCTTAGGTCTTCTACATGATATTGGACATGGACCTTTTAGCCACTTGTTTGAACGCGAGTTTCTTCCTCAAGTTTGCAATGGATTGGACTGGTAATACTTTACTGTGGAATGAATTCTGTTATTTGGATACCTCTCAAGATATATGTCACATTCTCATGCTATTCAATTTTTTTTTTTTGAAATAGATGCTATTCAATTTTTTTTTTTTTTTTGAAATAGATGATATTCAATTTTTCTTGGCTAATAAGAGTTGAATTTTTGACATTTCCAATTCCCTGCAACGTACTTGATCTTAGCAAGAATCTTCTACTTTTAGTAAAGGCTTGAAGTGATCAAATAAGGAAGAAATGAATTTTTACTTTTTTAGAGTGGGAATGTTTTCATATTGGATTATTGGCAAGTCTTTAGGAAAGCTCTAGTTTTGCCCTTTTAACTTCAATAAATCAATATATTTCTATCCCAAACTAGTTGGACAGTTTTATCATTTAATCATAGAAAATAAAGTTATGCTTACAGCATACATTATGTGGTAGAAATCCTAAAGTTGTAATTAATCATGGTGGAGGACCTTGGCATATGATGATTTTGTTTAGTTGTTTCCAACTGTTTGTGTCTGCTCTTGCCTGCTGGTTGTAGTGTTGATATTGAGAAAATATTTCCTAGTTAACTATCTTAATGTTTTTGTTGTTCAAGTTTCTTTGAAGCTTCTTGCACTCATAATGAGGTGATGTCATTATTTTAGTATAGTGCATATTAATGACCTTGTCTTATGTTTTATTTTAGGTCTCATGAGCAAATGTCTGTGGACATGATTGATCACATTGTTGATGAGCGTCGTATTGATATTGATTCTGGAACCATTAAAAGGGTCAAGGTAAGATGAATTATTTTGATTTATGCTAGTTGATATCATACGAGATGAGAATGGTAATTTGCTTATA</genome_strand>
        <mrna_strand>TCCTACTCTACGCCAGCTGCTCTCCTCTCTCTTTCTCTCTCCTTTCGGCACCTCAAAAG...........................................................................................AGTGGTGAAGTAGAGAGCCCAAGGGTGAGTATGGGAGCTTTTTCAAATGAAGAACTTAGTTTCTCTTCCAATTTCGACTTCGCTTCCTCTCAGGATCTCAGATTCTCTAAGCAAATCCATGACAACGTTCACGGCAACATCTACATCGACCCGGTATGTTGCTGTCTCTCACTCTCTGCTGGCTAGTTAACTTTCTACATTTCTGTACATGCTTTGCTTATACCTGCACTGTTTGAATTTATAGGTAGTTAGTTTTTCTTTTGTTTTGGTTCTAAGAGCAATCACAAATGTGTATGCTACACTAGTTTTCTGTGCTATCTAATAGCCAAAAGTGTACTACTATTTTAAAGGAAATTGATAACTGTCAATGAGATAAATGAGAATTCAGAGCTATTTTAAGTTGCACTTCATACATTTTTATTATCCACAGTTTTCTATGGGTAAGTCAGTGCCGAAATTGTACTCGCAAATTAGCCAAAATTGTTAACCGTCAGACTGAATAAATGAGTTCAAAACTATTTTGAATATCAATTCATAAATTTTTGTTATCCACAATTTTCTTAAAATTTTTCAACAAATAAAAAAAAAGTTATCTAGAATGCTTGTGACTTCCAATGTTCAAAGAAAAAAGTTATCTAGAACGCTTGTGCCAAAATTTTGATTTTGTTTCATTTAATGAAACATTAGTGACCATGTGACCATAACAATTAACAAGAGAAGATGATTTTTTCTTCATTCATGATTTATTCGAGAAGCATATAAGGTCAAAATTCATAAGTTTGTTTTGCTGGTAAGAATGGATCGATCTTAAAAGAATGATAGCAACAAAGTGTTTTCCCACACTGTCCTTGGTTAACCTGTGACACAATCCTCTTTCAGCTTTCAGGCTAAAACATGTATTTTATCCAATAGATCAATGAGTTGTTATTCGCCCGTATTTATTTATTAGTATGTGATTGTTTACCAGGCAAGAGAGACACTGGGGTGTGGAGGTTACTGTTTTCTCATTGTGATATCAGATCTACACTCTTATTTTCACTATTCTTATACATTTTCTTTAACTTCTTATTGAGAGCTTTGTGCAAACTACTGGAAGTTTATTCTTTTCTGAACTTTGCAGCTCTACTTGAAGTTCATTGACACAGAACAATTTCAAAG..........................................................................................................................................................................................................................................GCTTCGTGATCTTAAACAACTAGGTAAGTTACTATCCTTGTTCCCTATTTGCATACCTGGTCGCAAGCTTGTTTATGCTAGAACATCAAATTTAGCCTTGTGATTCAAAATGGGATATGAAGAAGTTTTCTTATCTATCATCTACGTGTCCGCTGAAATGTGGCATTTAGTTCTTTCATATTGCAAAATTATTACTAGTAAAATGTGGGATGACATAAAAGATGTAACTAACCTGTATTTTATTTGTCTTAATGTGAGTTGTTTTGGTTATCAAAACTATGATAAAATTGATAACTATCTTTGCCTCTTAAATATGTTCTGACATTATCTGCAACTTTCAGCTTCACTTTGTGATTAGCGGTGACACTTGAACGTATAAATAGTCTGTTTCAACTTCAGTGGTATCTAAATTGTGGTTGCATTGGTGACTGTCGTCGGATCCTTGTAAGGTCTTACGATAATTGCAAAGATATCTTGTTTCTTAGTGTCCTATGAAGACATATCTATATAGGTTATTCAAATTCTGGATATTCGTGTAAATGATGACTTAAGAACTCAAAATTAGCTTTTAAAGCCCTGCATGCATATTTCCCATACAAGCCTCTTGCAGAGGCTGAAGCAAGCCCAAGGTTACAAGCCTAGATGCAAGTTACAAAAAGGCTATATGGTCTCCTATTGCTCAATGGGTAAATTTCACCCTCTCTTAAAATGAGATCCATGTTATCTGTTCAAGAAGTTTAAATCATCCATCTTCCAATCAGTACTTGATGCAGCCACTGGCTCTTACTGTTGTGCTCAATGTTGGTGGAAACATTGTAAGTCTAGGAGTTAACAGCCTGGTAGTGGCTTGAATTTGTTACTAATATGAGCTCTTGTATTCACTTTAAGGTGTGACACACATGGTCTATCCAGGAGCAGTGCATTCTAGATTTGAGCATTCCCTTGGAGTGTATTGGCTTGCCAATGAAGCTGTCCATAAGCTTAAAACCCACCAA......................................................................................GGTATGGAGCTTGGAATTGATCACTTTGATATACAAACAGTGAAACTTGCAG......................................................................................GTCTTCTACATGATATTGGACATGGACCTTTTAGCCACTTGTTTGAACGCGAGTTTCTTCCTCAAGTTTGCAATGGATTGGACTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTCATGAGCAAATGTCTGTGGACATGATTGATCACATTGTTGATGAGCGTCGTATTGATATTGATTCTGGAACCATTAAAAGGGTCAAGGTAAGATGAATTATTTTGATTTATGCTAGTTGATATCATACGAGATGAGAATGGTAATTTGCTTATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U594466" ref_strand="+" ref_description="SGN-U594466 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157345484|emb|CAO14782.1| (e_value=9e-33) unnamed; (*ATH) AT5G40270.1 (e_value=3e-32)  Symbol: None | metal-dependent phosphohydrolase HD domain-containing protein, similar to SP:Q60710 Interferon-gamma inducible protein MG11 {Mus musculus}; contains Pfam profile PF01966: HD domain | chr5:16110400-16114447 REVERSE | Aliases: MSN9.18, ... ; ">
      <seq>gtttatactcacgctaaagagaaggcaatagagcttatgattgtagatgcactagtgaaagcaaatgattatctacacatatcatcacatatagagcatccttctcaatactggaagtaagatgacaccattttaaaaaccatcgagactgctccagacccggaactgaaggaatctagggattagatccttcgtgtccgaaggagagaaatgtaccagttctgaaatgagtatgctgtcccaagagacaaaaaagagcatgtcaaggatagtcacggcaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E02.1" temp_strand="+" temp_description="C02HBa0236E02.1  AC215430.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E02 sequenced_by:kribb upload_account_name:korea">
        <position start="79197" stop="80388"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79497" g_stop="79520" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="24" r_length="24" r_score="0.958"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79521" i_stop="79652" i_length="132">
            <donor d_prob="0.961" d_score="0.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79653" g_stop="79745" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="25" r_stop="117" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="79746" i_stop="79826" i_length="81">
            <donor d_prob="0.255" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="79827" g_stop="79928" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="118" r_stop="219" r_length="102" r_score="0.961"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="79929" i_stop="80026" i_length="98">
            <donor d_prob="0.873" d_score="0.94"/>
            <acceptor a_prob="0.993" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="80027" g_stop="80088" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="220" r_stop="282" r_length="63" r_score="0.919"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E02.1" gen_strand="+" ref_id="SGN-U594466" ref_strand="+">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>281</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U594466" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79497" e_stop="79520"/>
          <exon e_start="79653" e_stop="79745"/>
          <exon e_start="79827" e_stop="79928"/>
          <exon e_start="80027" e_stop="80088"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTATACTCACGCTAAAGTGAAGGTACATAGCTAATTTGACGAAGTTGTGCACTGATTTTCTCACCAGCATATCTGAAATGTGGAAGTTATCATTTTGTATGTCATATTTAAGTATGTACACATTTTCAATTTGTTTTCCCATATCATTGTACAGGCAATAGAGCTTATGATTGTAGATGCACTAGTGAAAGCAAATGATTATCTACACATATCATCACATATAGAGCATCCTTCTCAATACTGGAAGGTCGGCATGGTCTTTTTGTTAGCTTCAACCTCCTTAATTCATGGAACCATGAAAATAATTTCTCTGTGTATGTGGAAGTAGTTAGATGACACCATTTTAAAAACCATCGAGACTGCTCCAGACCCGGAACTGAAGGAATCTAGGGATTTGATCCTTCGTGTCCGAAGGAGAGATTTGTACCAGGTACTGAGGTTATCTAATGGGTGTTGATTAAGCAGGTTATATGAGTATTATGGGATGTTTGAAGTTTACGGGTTAATTCTTGTTTTTGCACATTGCAGTTCTGTAATGAGTATGCTGTCCCAAGAGACAAAATAGAGCATTTCAAGGAT-GTCACGGCACA</genome_strand>
        <mrna_strand>GTTTATACTCACGCTAAAGAGAAG....................................................................................................................................GCAATAGAGCTTATGATTGTAGATGCACTAGTGAAAGCAAATGATTATCTACACATATCATCACATATAGAGCATCCTTCTCAATACTGGAAG.................................................................................TAAGATGACACCATTTTAAAAACCATCGAGACTGCTCCAGACCCGGAACTGAAGGAATCTAGGGATTAGATCCTTCGTGTCCGAAGGAGAGAAATGTACCAG..................................................................................................TTCTGAAATGAGTATGCTGTCCCAAGAGACAAAAAAGAGCATGTCAAGGATAGTCACGGCACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U573199" ref_strand="+" ref_description="SGN-U573199 Tomato 200607#2 [30 ESTs aligned] (*GB) gi|157345486|emb|CAO14784.1| (e_value=2e-180) unnamed; (*ATH) AT3G01480.1 (e_value=4e-175)  Symbol: None | peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative, similar to peptidyl-prolyl cis-trans isomerase, chloroplast precursor (40 kDa thylakoid lumen PPIase, 40 kDa thylakoid lumen rotamase) (Spinac... ; (*SWP) sp|O49939|TLP40_SPIOL (e_value=4e-174) Peptidyl-prolyl cis-trans isomerase, chloroplastic OS=Spinacia oleracea GN=TLP40; ">
      <seq>gctctggtattccaattttatccttatctctttctactctcctcctgtccattacacctattttcaatctcaatttcttcattaataacagttgcattttgtcaatttttttccctccaaaccccaaatgtcctctagaattgcttgactgtgtaaacaaactagttgtaaattcatcaatggcagcatctgtttcctgccactatttttcttccccattaacaacttccaccaaatccatcaagcctaagctcaattacagccatttcgcacctgctcttagtaaaggatcgatccgccattttgttccactatgttcttcacaacgctcgcttccttctgaatcggaatgccaagacaaagagaaagattggtttttgtcattgaagaaatgtgcagctgcagtagcattgtcggttagtttgattagtggactacctggatcgcaatggttgggtcctgctcatgcgagcaccccagcattgccagatgtctctgtattgatctcagggccaccaattaaggatccaggggcgttattgaggtatgcattgcctatagacaacaaggcgataagagaagtccaaaaaccccttgaagatattactgatagtctcaagattgctggtgtcaaggcgcttgactctgttgaaagaaatacaagacaagcatctcgagctctcaaggaagggaaaaccttgattatttcaggagtagctaagtcaaagactgaccacgctattgaattgctaaacaaactagaagctgggttaggtgagcttcaacaaattgttgaagacaggactcgagatgctgttgcacctaaacagaaggaattgcttaactatgttggaggctgagatcttcctggggcattcgatttctgcagtgttgaagaggatatggtggatggattcccatatgaagtacctgaagaatatcaaaatatgcctttactgaagggaagagcaactgtggatatgaaggtcaaagtcaaagacaatcccaacctggaggaatgcgtatttcgtattgttctagatggatataatgctccagttactgctggaaatattatagacttggtcgagaggcatttctatgatggcatggatattcaaagagcggatggatttgtggtacaaacaggagatcctgaaggtccagctgaaggttttattgaccccagtacagagaaaacccggacagtacctctagagattatggtggttggtgaaaaagcaccattctacggagaaactttggaagatcttggtctatacaaggctcaaacaagactacctttcaatgcttttggaacaatggccatggctagagaagaatttgagaataactctgcctcaagtcaggtgttttggttgctgaaagaaagtgaactgactcctagcaacgccaatatattggatggtcgatatgctgtgtttggttatgtgacagaaaatgaggactttctggcagatctgaaggtgggagatgtgatagaatcaatacaagttgtatctggcctcgataatcttgtgaatccaagctacaagattgctggttagagatgtcgtttaagtgaggaattatcggaattaagacctacctgcattgagttgttcacgaaactctctgaagagtataatcattattttcatcatatattcaacaatttcagtttcttgcttttgn</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E02.1" temp_strand="-" temp_description="C02HBa0236E02.1  AC215430.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E02 sequenced_by:kribb upload_account_name:korea">
        <position start="86098" stop="81749"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85799" g_stop="85435" g_length="365"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="365" r_length="365" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="85434" i_stop="85119" i_length="316">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="85118" g_stop="84828" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="366" r_stop="656" r_length="291" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="84827" i_stop="84719" i_length="109">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="84718" g_stop="84519" g_length="200"/>
          <reference_exon_boundary r_type="cDNA" r_start="657" r_stop="856" r_length="200" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="84518" i_stop="83899" i_length="620">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.879" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="83898" g_stop="83630" g_length="269"/>
          <reference_exon_boundary r_type="cDNA" r_start="857" r_stop="1125" r_length="269" r_score="0.996"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="83629" i_stop="83245" i_length="385">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="83244" g_stop="83102" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="1126" r_stop="1268" r_length="143" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="83101" i_stop="82577" i_length="525">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="82576" g_stop="82505" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="1269" r_stop="1340" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="82504" i_stop="82403" i_length="102">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="82402" g_stop="82048" g_length="355"/>
          <reference_exon_boundary r_type="cDNA" r_start="1341" r_stop="1695" r_length="355" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E02.1" gen_strand="-" ref_id="SGN-U573199" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1695</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U573199" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85799" e_stop="85435"/>
          <exon e_start="85118" e_stop="84828"/>
          <exon e_start="84718" e_stop="84519"/>
          <exon e_start="83898" e_stop="83630"/>
          <exon e_start="83244" e_stop="83102"/>
          <exon e_start="82576" e_stop="82505"/>
          <exon e_start="82402" e_stop="82048"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTCTGGTATTCCAATTTTATCCTTATCTCTTTCTACTCTCCTCCTGTCCATTACACCTATTTTCAATCTCAATTTCTTCATTAATAACAGTTGCATTTTGTCAATTTTTTTCCCTCCAAACCCCAAATGTCCTCTAGAATTGCTTGACTGTGTAAACAAACTAGTTGTAAATTCATCAATGGCAGCATCTGTTTCCTGCCACTATTTTTCTTCCCCATTAACAACTTCCACCAAATCCATCAAGCCTAAGCTCAATTACAGCCATTTCGCACCTGCTCTTAGTAAAGGATCGATCCGCCATTTTGTTCCACTATGTTCTTCACAACGCTCGCTTCCTTCTGAATCGGAATGCCAAGACAAAGAGGCAAGTTCTATTATTCTCCTTCACTTTTTTTTTTATAAAAAAAATAGACGTTCATTAGTTCGAAATGAGTTAATGGAAATTCAAATATCTAAATGAGAAGTTTGAGTGTACAATTGCATCTATTACTTCGTACTTTAGTATAAAAAAATCGACTATATGCATATGTAGTTTAAGCCGAATCCACTGCCTCAGTTATACAATGTTAGCATTTGTAAGTAATGACAAGACTGCAGTTGGTAGTTCTTTCTAAAGTTCTCAAGTGTGTGTTCTTAATAAGTAGGAACTTATATGATGAAGATTTTTCCCAAACCTGCAGAAAGATTGGTTTTTGTCATTGAAGAAATGTGCAGCTGCAGTAGCATTGTCGGTTAGTTTGATTAGTGGACTACCTGGATCGCAATGGTTGGGTCCTGCTCATGCGAGCACCCCAGCATTGCCAGATGTCTCTGTATTGATCTCAGGGCCACCAATTAAGGATCCAGGGGCGTTATTGAGGTATGCATTGCCTATAGACAACAAGGCGATAAGAGAAGTCCAAAAACCCCTTGAAGATATTACTGATAGTCTCAAGATTGCTGGTGTCAAGGCGCTTGACTCTGTTGAAAGAGTAAGATGTCATTTGCTTAGTTGTTCCCACTTTGATAATTTATTGGCTTGAATCTACTTATTAATGTAGTTCTAGATTCGTAATGGTGGTTCGTATTTTAACTGTGTAGAATACAAGACAAGCATCTCGAGCTCTCAAGGAAGGGAAAACCTTGATTATTTCAGGAGTAGCTAAGTCAAAGACTGACCACGCTATTGAATTGCTAAACAAACTAGAAGCTGGGTTAGGTGAGCTTCAACAAATTGTTGAAGACAGGACTCGAGATGCTGTTGCACCTAAACAGAAGGAATTGCTTAACTATGTTGGAGGGTAAGTGTAGCTAGCTTAGTCTACTTCTAAAAACAGTATTGCTAGCTTAGTTTTCCATGTTCTTTGATGCACATTTTCATAAACCCTGCGAGTTGTAAAGAGTAATGAGTTGTCGGGCTTTGATTTTCTGCTTGATGATGCATCAATATGATGCTTTGTTACTGCTTCATGGACTTAATTTTATCTTCACATGAGACTGAAAAAGAGACCAATCATGCACATACTTAGCCGAAGTATCTGTTCTTCTGTCCTGAATATGTATTGGGTAGCTTGGTTTAGGCAAAGTCAATATCCATATAAAGTGTTGTATTTTCTGTGCTTTGTTACTGGAAATGTTCTAAAAGAAGGTGTCAAAACCTTAGTACAAAATAACTTTTTCTTCTGAAACTTTCACAAAGCAATTGCTTTGGTAGAATTTATGCCACAGAAGCACAGAAGTGTCATTGGACGGATGCATGTTTAAGTAGGCTACTTATTCCAGTTTGAATACCAAAATAAGATTTTTTGTTGACTATGGACCAATTCTATGAATAGAAAGTGAAGAGTGATGAAAACTTTTAAAAATGGTGAATTTCCAAAGTTATGCCTTTCTCATTTAGACCCCTTGTCATTGACTGCAGCTGAGATCTTCCTGGGGCATTCGATTTCTGCAGTGTTGAAGAGGATATGGTGGATGGATTCCCATATGAAGTACCTGAAGAATATCAAAATATGCCTTTACTGAAGGGAAGAGCAACTGTGGATATGAAGGTCAAAGTCAAAGACAATCCCAACCTGGAGGAATGCGTATTTCGTATTGTTCTAGATGGATATAATGCTCCAGTTACTGCTGGAAATTTTATAGACTTGGTCGAGAGGCATTTCTATGATGGCATGGATATTCAAAGAGGTGAGCTTATGATTTTTGCTCTGTTCTTGCGAATCAATGAAACAAATAAAACTGTCTATGCATCAAACAAGGAATGTTGTCCGTGTATGGTCCAGTGGTTTGAGCTTGGAATTTCCATGTTGGAGGTCTCAAGTTCGAAACCCCTTGCCAGCAAAGCAAGGGGTTTGCCTTCTGGGTCGAGCTCGTTGCACCAGGCTTGCCTAGTGCGGGTTACCTCTCTTATGTGGTTTGCGAGCTATTGCATAGGAGCGGAGTTTTACCCTGTGCGCACCCAAAAGGGTAGCGGCTGCGGGTTTCCCTTGTCGTGTAAAAAAAAAAAAGGGATGTCCGTGTAGTTTGTGACCTGAATATGTTCTTGAAACTCATTATTGTGGATGTTCTGCAGCGGATGGATTTGTGGTACAAACAGGAGATCCTGAAGGTCCAGCTGAAGGTTTTATTGACCCCAGTACAGAGAAAACCCGGACAGTACCTCTAGAGATTATGGTGGTTGGTGAAAAAGCACCATTCTACGGAGAAACTTTGGAAGTAAGTTCATGTTATTGTCATTTTGCTGCCTCTAAATTTAACTTTTTGGTGTCCTACTCCTGATCACTTCTCTCCAATTGCTCAGTAGAAGCTATAAACAGTATAAGAGTAGACGTTGTCAGCCAGGCTATCATATATGGATTATACATTTATACCCAGTTTATTGAGATGGTCTTAGAAATTACCATAGACCTGTAATTGTGGAGAGAAAGATCACTTGCCCCAGCATTTGGGCCATTGGCATGCCTGCTCTTGCATAGATCTCACTCCTCAATTCATCCATAGAGTAGGACTCCATGTTGAGAAATGGATTTATATTCCCTCAGCACTAAACTTTCCCTACTTACGCCATCACAGATTCACAGCCTTAAACAAGAAAATTCTCCGTTATACTAAACCAGCGAAAATGTTTCTGATACACTCAACAAAGGTTTCATATTTGCCTTTATCATGGTATTCTTCTCTTCACTTTATATTCCTTGTTATTCCTTCTGTTTTAATAAGGCTCTGGAATTATTTCTACAGGATCTTGGTCTATACAAGGCTCAAACAAGACTACCTTTCAATGCTTTTGGAACAATGGCCATGGCTAGAGAAGTGAGATACCTTTACTTTTGATGTTGCATCTGCTTATTTCATGTAACTTTATTTGATGACCTTTATATTTGTTAAAACTCATTGGATTATGGGCGCTTACAGGAATTTGAGAATAACTCTGCCTCAAGTCAGGTGTTTTGGTTGTTGAAAGAAAGTGAACTGACTCCTAGCAACGCCAATATATTGGATGGTCGATATGCTGTGTTTGGTTATGTGACAGAAAATGAGGACTTTCTGGCAGATCTGAAGGTGGGAGATGTGATAGAATCAATACAAGTTGTATCTGGCCTCGATAATCTTGTGAATCCAAGCTACAAGATTGCTGGTTAGAGATGTCGTTTAAGTGAGGAATTATCGGAATTAAGACCTACCTGCATTGAGTTGTTCACGAAACTCTCTGAAGAGTATAATCATTATTTTCATCATATATTCAACAATTTCAGTTTCTTGCTTTTGA</genome_strand>
        <mrna_strand>GCTCTGGTATTCCAATTTTATCCTTATCTCTTTCTACTCTCCTCCTGTCCATTACACCTATTTTCAATCTCAATTTCTTCATTAATAACAGTTGCATTTTGTCAATTTTTTTCCCTCCAAACCCCAAATGTCCTCTAGAATTGCTTGACTGTGTAAACAAACTAGTTGTAAATTCATCAATGGCAGCATCTGTTTCCTGCCACTATTTTTCTTCCCCATTAACAACTTCCACCAAATCCATCAAGCCTAAGCTCAATTACAGCCATTTCGCACCTGCTCTTAGTAAAGGATCGATCCGCCATTTTGTTCCACTATGTTCTTCACAACGCTCGCTTCCTTCTGAATCGGAATGCCAAGACAAAGAG............................................................................................................................................................................................................................................................................................................................AAAGATTGGTTTTTGTCATTGAAGAAATGTGCAGCTGCAGTAGCATTGTCGGTTAGTTTGATTAGTGGACTACCTGGATCGCAATGGTTGGGTCCTGCTCATGCGAGCACCCCAGCATTGCCAGATGTCTCTGTATTGATCTCAGGGCCACCAATTAAGGATCCAGGGGCGTTATTGAGGTATGCATTGCCTATAGACAACAAGGCGATAAGAGAAGTCCAAAAACCCCTTGAAGATATTACTGATAGTCTCAAGATTGCTGGTGTCAAGGCGCTTGACTCTGTTGAAAGA.............................................................................................................AATACAAGACAAGCATCTCGAGCTCTCAAGGAAGGGAAAACCTTGATTATTTCAGGAGTAGCTAAGTCAAAGACTGACCACGCTATTGAATTGCTAAACAAACTAGAAGCTGGGTTAGGTGAGCTTCAACAAATTGTTGAAGACAGGACTCGAGATGCTGTTGCACCTAAACAGAAGGAATTGCTTAACTATGTTGGAGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGATCTTCCTGGGGCATTCGATTTCTGCAGTGTTGAAGAGGATATGGTGGATGGATTCCCATATGAAGTACCTGAAGAATATCAAAATATGCCTTTACTGAAGGGAAGAGCAACTGTGGATATGAAGGTCAAAGTCAAAGACAATCCCAACCTGGAGGAATGCGTATTTCGTATTGTTCTAGATGGATATAATGCTCCAGTTACTGCTGGAAATATTATAGACTTGGTCGAGAGGCATTTCTATGATGGCATGGATATTCAAAGAG.................................................................................................................................................................................................................................................................................................................................................................................................CGGATGGATTTGTGGTACAAACAGGAGATCCTGAAGGTCCAGCTGAAGGTTTTATTGACCCCAGTACAGAGAAAACCCGGACAGTACCTCTAGAGATTATGGTGGTTGGTGAAAAAGCACCATTCTACGGAGAAACTTTGGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTTGGTCTATACAAGGCTCAAACAAGACTACCTTTCAATGCTTTTGGAACAATGGCCATGGCTAGAGAA......................................................................................................GAATTTGAGAATAACTCTGCCTCAAGTCAGGTGTTTTGGTTGCTGAAAGAAAGTGAACTGACTCCTAGCAACGCCAATATATTGGATGGTCGATATGCTGTGTTTGGTTATGTGACAGAAAATGAGGACTTTCTGGCAGATCTGAAGGTGGGAGATGTGATAGAATCAATACAAGTTGTATCTGGCCTCGATAATCTTGTGAATCCAAGCTACAAGATTGCTGGTTAGAGATGTCGTTTAAGTGAGGAATTATCGGAATTAAGACCTACCTGCATTGAGTTGTTCACGAAACTCTCTGAAGAGTATAATCATTATTTTCATCATATATTCAACAATTTCAGTTTCTTGCTTTTGN</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U588554" ref_strand="+" ref_description="SGN-U588554 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|15232123|ref|NP_186797.1| (e_value=8e-18) thylakoid lumen rotamase [Arabidopsis thaliana]; (*ATH) AT3G01480.1 (e_value=8e-20)  Symbol: None | peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative, similar to peptidyl-prolyl cis-trans isomerase, chloroplast precursor (40 kDa thylakoid lumen PPIase, 40 kDa thylakoid lumen rotamase) (Spinac... ; (*SWP) sp|Q9SSA5|CYP38_ARATH (e_value=6e-19) Peptidyl-prolyl cis-trans isomerase CYP38, chloroplastic OS=Arabidopsis thaliana GN=CYP38; ">
      <seq>cagcaacattccttgtttgatgcatagacagttttatttgtttcattgattcgcaagaacagagcaaaaatcataagctcacctctttgaatatccatgccatcatagaaatgcctctcgaccaagtctataaaatttccagcagtaactggagcattatatccatctagaacaatacgaaatacgcattcctccaggtacttcatatgggaatccatccaccatatcctcttcaacactgcagaaatcgaatgccccaggaagatctcagctgcagtcaatgacaaggggtctaaatgagaaaggcataactttggaaattcaccatttttaaaagttttcatcactcttcactttctattcatagaattggtccatagtcaacaaaaaatcttattttggtattcaaactggaataagtagcctacttaaacatgcatccgtccaatgacacttctgtgcttctgtggcataaattctaccaaagcaattgctttgtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E02.1" temp_strand="+" temp_description="C02HBa0236E02.1  AC215430.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E02 sequenced_by:kribb upload_account_name:korea">
        <position start="83251" stop="84427"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83547" g_stop="83744" g_length="198"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="197" r_length="197" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="83745" i_stop="83824" i_length="80">
            <donor d_prob="0.794" d_score="1.00"/>
            <acceptor a_prob="0.917" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="83825" g_stop="84127" g_length="303"/>
          <reference_exon_boundary r_type="cDNA" r_start="198" r_stop="500" r_length="303" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E02.1" gen_strand="+" ref_id="SGN-U588554" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>501</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U588554" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83547" e_stop="83744"/>
          <exon e_start="83825" e_stop="84127"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGACAACATTCCTTGTTTGATGCATAGACAGTTTTATTTGTTTCATTGATTCGCAAGAACAGAGCAAAAATCATAAGCTCACCTCTTTGAATATCCATGCCATCATAGAAATGCCTCTCGACCAAGTCTATAAAATTTCCAGCAGTAACTGGAGCATTATATCCATCTAGAACAATACGAAATACGCATTCCTCCAGGTTGGGATTGTCTTTGACTTTGACCTTCATATCCACAGTTGCTCTTCCCTTCAGTAAAGGCATATTTTGATATTCTTCAGGTACTTCATATGGGAATCCATCCACCATATCCTCTTCAACACTGCAGAAATCGAATGCCCCAGGAAGATCTCAGCTGCAGTCAATGACAAGGGGTCTAAATGAGAAAGGCATAACTTTGGAAATTCACCATTTTTAAAAGTTTTCATCACTCTTCACTTTCTATTCATAGAATTGGTCCATAGTCAACAAAAAATCTTATTTTGGTATTCAAACTGGAATAAGTAGCCTACTTAAACATGCATCCGTCCAATGACACTTCTGTGCTTCTGTGGCATAAATTCTACCAAAGCAATTGCTTTGTG</genome_strand>
        <mrna_strand>CAG-CAACATTCCTTGTTTGATGCATAGACAGTTTTATTTGTTTCATTGATTCGCAAGAACAGAGCAAAAATCATAAGCTCACCTCTTTGAATATCCATGCCATCATAGAAATGCCTCTCGACCAAGTCTATAAAATTTCCAGCAGTAACTGGAGCATTATATCCATCTAGAACAATACGAAATACGCATTCCTCCAG................................................................................GTACTTCATATGGGAATCCATCCACCATATCCTCTTCAACACTGCAGAAATCGAATGCCCCAGGAAGATCTCAGCTGCAGTCAATGACAAGGGGTCTAAATGAGAAAGGCATAACTTTGGAAATTCACCATTTTTAAAAGTTTTCATCACTCTTCACTTTCTATTCATAGAATTGGTCCATAGTCAACAAAAAATCTTATTTTGGTATTCAAACTGGAATAAGTAGCCTACTTAAACATGCATCCGTCCAATGACACTTCTGTGCTTCTGTGGCATAAATTCTACCAAAGCAATTGCTTTGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U581823" ref_strand="+" ref_description="SGN-U581823 Tomato 200607#2 [34 ESTs aligned] (*GB) gi|211853240|emb|CAP16664.1| (e_value=7e-134) homeodomain; (*ATH) AT3G01470.1 (e_value=7e-63)  Symbol: None | homeobox-leucine zipper protein 5 (HAT5) / HD-ZIP protein 5 / HD-ZIP protein (HB-1), identical to homeobox-leucine zipper protein HAT5 (HD-ZIP protein 5) (HD-ZIP protein ATHB-1) GB:Q02283 (Arabidopsis thaliana) | chr3:182567-184410 RE... ; (*SWP) sp|Q02283|HAT5_ARATH (e_value=6e-62) Homeobox-leucine zipper protein HAT5 OS=Arabidopsis thaliana GN=HAT5; ">
      <seq>gagtcgcaaaataaacttacaaaacagcacatatatatagagacaaaatcacataatacgccctcgccggaatcttattttcactgtcgccggccgttaaaactttttttttctagttcggaggtcaaataattaacctccgatcggaagaagtagttattctaactgcttctatttaatctgaaaacgggaaaacccctgagctggttaaggtggatttcgtgatgggattttgtatttgtcctttggaaactcctgctagattactgtggagtactagtttcttccgccacaagcttatgctcttctaaaacttagtcaactctcttttttcatacacatccctgctaaaaaagaagaactctgtgctggagtttttgttttcctttttctgtttcgccggaaacatataaataatcttctgtgtgtaaataggcgattttccagatagttgaaaatatgggatctgggcatatatttttcgacccgtcgtcgtgtcacggcaacatgctgttccttgggagcggagatcctgttttccgaggaccaagatcgacgatgatgaagatggaggactcctcgaagaggcgacccttctttagctcgccggaggatctatatgacgaggaatactacgacgagcagtcaccggagaagaagcgccgtctcactcctgagcaggtgcacttgttggagaagagctttgagacagaaaacaagctggagcccgagcgcaaaacccagctggccaaaaagctggggctgcagcccagacaggtggctgtatggttccaaaaccgccgtgcccggtggaagaccaagcagctcgagagggattatgatcagctcaaatcctcttatgactcccttctctctgattttgactccgttcgcaaagataacgataagctcaaatctgaggttgtttcattgatggaaaagttacaggggaaagtggttggaggagcagggggaaatgaaaaatctgacatcttggaggtggatgctatgacgatccttcaagtgaaggtgaaggctgaggaccggttgagcagtggcagtggtgggagcgcggtggtagatgagcatagtccacagctggtggacagtggggactcatattttcacactgatcatgaggagtatccagggcctggaggatgcaatgttcctccacccatggatggtttacaatcggaggaagatgatggtagtgatgatcatggcagttgccatggctacttctctaacgtctttgtggcagaagagcagcaccatgaacaaggagaagagcctattggatggttctggtcttaattgaattttagaatattatattacagtttttcttatctacgcgcgctttgtatgatgaaataagtgtcgtaattccaacttcttatttaaacatctattaatatgcttttgcagcttttaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E02.1" temp_strand="+" temp_description="C02HBa0236E02.1  AC215430.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E02 sequenced_by:kribb upload_account_name:korea">
        <position start="101313" stop="105476"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="101612" g_stop="102155" g_length="544"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="544" r_length="544" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="102156" i_stop="102705" i_length="550">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="102706" g_stop="102842" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="545" r_stop="681" r_length="137" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="102843" i_stop="103290" i_length="448">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.784" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="103291" g_stop="103530" g_length="240"/>
          <reference_exon_boundary r_type="cDNA" r_start="682" r_stop="921" r_length="240" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="103531" i_stop="104660" i_length="1130">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="104661" g_stop="105181" g_length="521"/>
          <reference_exon_boundary r_type="cDNA" r_start="922" r_stop="1442" r_length="521" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E02.1" gen_strand="+" ref_id="SGN-U581823" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>1442</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U581823" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="101612" e_stop="102155"/>
          <exon e_start="102706" e_stop="102842"/>
          <exon e_start="103291" e_stop="103530"/>
          <exon e_start="104661" e_stop="105181"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGTCGCAAAATAAACTTACAAAACAGCACATATATATAGAGACAAAATCACATAATACGCCCTCGCCGGAATCTTATTTTCACTGTCGCCGGCCGTTAAAACTTTTTTTTTCTAGTTCGGAGGTCAAATAATTAACCTCCGATCGGAAGAAGTAGTTATTCTAACTGCTTCTATTTAATCTGAAAACGGGAAAACCCCTGAGCTGGTTAAGGTGGATTTCGTGATGGGATTTTGTATTTGTCCTTTGGAAACTCCTGCTAGATTACTGTGGAGTACTAGTTTCTTCCGCCACAAGCTTATGCTCTTCTAAAACTTAGTCAACTCTCTTTTTTCATACACATCCCTGCTAAAAAAGAAGAACTCTGTGCTGGAGTTTTTGTTTTCCTTTTTCTGTTTCGCCGGAAACATATAAATAATCTTCTGTGTGTAAATAGGCGATTTTCCAGATAGTTGAAAATATGGGATCTGGGCATATATTTTTCGACCCGTCGTCGTGTCACGGCAACATGCTGTTCCTTGGGAGCGGAGATCCTGTTTTCCGAGGTATTCTCTAATCATTATGTTCTCTATTCCAATTACTTATATTACTATGAAAATATAATTTAAGAACTTTTTTGATGACTCAATTCCACTATTAAAATTGAAAGTAAAGTATGTATATGATATGAGTAACACTATCACTAGAAAGTGAAATTCGTCTTGATCTGATTTAATTTTTTTGAATGATGTAAATTTTATTATTCAAATTTACAACCAAAACAAGTATAGAAATATTTTGTCCAAGTTAATTTATTCTGAATCGTACAAGATGAAACGAAGCGGTTAACTTGTAGGGTAACCTGCGATAGATGATTTATAATTTCAGTGTACGAAGAGGTTAAGATATACGTAGATCCTTCGTACATATTTTTATAAGTTGTTTCAGATAGATAGTTTTAAATTCAATTCACTTAGGGTATTGTTTTTATAGATTGATTATCTCTAGTACAGTAAAAATAATGATAAAATTGTAACAACCTTTTTGCATGTAAGTTCTAAGGGTGGCCTTTTATACTATTCTATTTTGAAGCTTGACTTATATTGATTGATACAGGACCAAGATCGACGATGATGAAGATGGAGGACTCCTCGAAGAGGCGACCCTTCTTTAGCTCGCCGGAGGATCTATATGACGAGGAATACTACGACGAGCAGTCACCGGAGAAGAAGCGCCGTCTCACTCCTGAGCAGGTTAGCATCCTGTTCCTCCTTTATCTACCCAAAAATATAAATTAAGTAAATGCGTTTTTTTAATAGTTCGATGGAGTAGTTATCAATTCAACATACTGTGACATATATCTCCTAGCTATCAAGATAGTTAAATTTTTTGGTTCAAATCTCACCATCACATATTTTTGGCAATTGGCCACTACATGTGAAACGATTTGTTTAGTCAAATTATAATTAAGTAACTAAAGAAGATTCCCTCTAAAGTGATTTAAGTTTTTAATTATATTGGAACATATTCACCACTATAGCATCAAATTCTTCACAATATCTACCTTTAAACCCTGAAAAGAAGAGAATTTCTTTTTTATCAACGAGCGTTTTCTTTAAGCAAAATTTTATAATTTTGTGGGATTCGATTACTTGCTGAGCAATAAGTGCATGTCCTGCGTTGTTGGGTACGTAAATGAAGGTGCACTTGTTGGAGAAGAGCTTTGAGACAGAAAACAAGCTGGAGCCCGAGCGCAAAACCCAGCTGGCCAAAAAGCTGGGGCTGCAGCCCAGACAGGTGGCTGTATGGTTCCAAAACCGCCGTGCCCGGTGGAAGACCAAGCAGCTCGAGAGGGATTATGATCAGCTCAAATCCTCTTATGACTCCCTTCTCTCTGATTTTGACTCCGTTCGCAAAGATAACGATAAGCTCAAATCTGAGGTATAACCATATAGTAATAGTGTTGTGATCATTTTATTTGCTTAGATTCTATTATACTTTGTACCAACCTCTTAACATCGATTTTTCTGGTCGATTTTTGGCATATCTATTAATACTATGTCCTTAAGGCCTTAGCTTTTGCAATACTCTATGAGAAAGAATTAACAAATCTTGGATAACACACCTGTCTTGCAACGATTTGATCAATGACAAAAAGCCGCCTTTCTTGTAACACTGGGGAGTCGGATATATATGTAGAATAATATGATGCCTTACTGAATAAAAACTAGCTAGGAGAGAGTCTATGATAATTTTTTTGTAGTATATAGTAGAATATTAAGATATGTTTGTTGACGAAATTTGTCGGCGAAGTTGGTAATTGGTAGAAATTTTAATCTGACTTTTAATTTGAGGTCATATTCTGTGTAACACCTGGCCATCAATATTAGTAGTGGGGAACCTCACAAACAATATTCTTCCTCACCTAGAATAGAAAATTATATCTGTCAATGTCCTTCTGAGTCATCTTGCATCAGAGTCAAATAAATAAAGTAGCATCTGTTCTAACCCCCCCACTTTCAATGTTTTTTTCTATTACTTGGATTTCAATTTCAAAAAAAGCGAATATACTTTTGATATATTGGGAAAACTTGCTTTAAAATATGCGTAGTGATGAAGACCTTACTATATAGATAGTGGATGTATCACTATCAGAGTTACGCTACTGTTATTTCTTAGTAAACTTTTACTAATTTATTCTTTTGCTTTTATTTTGCACCTTCGTTTTTTTAAAAGTGATGTAATAATAGGGTTATCAACAGCATATTTTTTTTTTTTACAATATTACGCTAAGTTGACTTATAACAATTGGCAACTCTTCATAATACGTCAAAGAGTTGGTATACATTGTAAGACTTGCGCATTTACGTCACACATCAAATCAAATTTTATATATAAGTTTATCACAACTTATTGTATAGTAGGTACACCTGACTTGGCTTGTATTCGAGGTTGCTAATCCCACTAAATGTGATTTTATCTTTTTAGCTTACATGATAGCGTGCAAGTAATTAAGTTGTTGTATATAGTAATAGATTTGAAACTATTTTGTTAATTGGGGAAAAATGCAGGTTGTTTCATTGATGGAAAAGTTACAGGGGAAAGTGGTTGGAGGAGCAGGGGGAAATGAAAAATCTGACATCTTGGAGGTGGATGCTATGACGATCCTTCAAGTGAAGGTGAAGGCTGAGGACCGGTTGAGCAGTGGCAGTGGTGGGAGCGCGGTGGTAGATGAGCATAGTCCACAGCTGGTGGACAGTGGGGACTCATATTTTCACACTGATCATGAGGAGTATCCAGGGCCTGGAGGATGCAATGTTCCTCCACCCATGGATGGTTTACAATCGGAGGAAGATGATGGTAGTGATGATCATGGCAGTTGCCATGGCTACTTCTCTAACGTCTTTGTGGCAGAAGAGCAGCACCATGAACAAGGAGAAGAGCCTATTGGATGGTTCTGGTCTTAATTGAATTTTAGAATATTATATTACAGTTTTTCTTATCTACGCGCGCTTTGTATGATGAAATAAGTGTCGTAATTCCAACTTCTTATTTAAACATCTATTAATATGCTTTTGCAGCTTTTATTCTC</genome_strand>
        <mrna_strand>GAGTCGCAAAATAAACTTACAAAACAGCACATATATATAGAGACAAAATCACATAATACGCCCTCGCCGGAATCTTATTTTCACTGTCGCCGGCCGTTAAAACTTTTTTTTTCTAGTTCGGAGGTCAAATAATTAACCTCCGATCGGAAGAAGTAGTTATTCTAACTGCTTCTATTTAATCTGAAAACGGGAAAACCCCTGAGCTGGTTAAGGTGGATTTCGTGATGGGATTTTGTATTTGTCCTTTGGAAACTCCTGCTAGATTACTGTGGAGTACTAGTTTCTTCCGCCACAAGCTTATGCTCTTCTAAAACTTAGTCAACTCTCTTTTTTCATACACATCCCTGCTAAAAAAGAAGAACTCTGTGCTGGAGTTTTTGTTTTCCTTTTTCTGTTTCGCCGGAAACATATAAATAATCTTCTGTGTGTAAATAGGCGATTTTCCAGATAGTTGAAAATATGGGATCTGGGCATATATTTTTCGACCCGTCGTCGTGTCACGGCAACATGCTGTTCCTTGGGAGCGGAGATCCTGTTTTCCGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCAAGATCGACGATGATGAAGATGGAGGACTCCTCGAAGAGGCGACCCTTCTTTAGCTCGCCGGAGGATCTATATGACGAGGAATACTACGACGAGCAGTCACCGGAGAAGAAGCGCCGTCTCACTCCTGAGCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCACTTGTTGGAGAAGAGCTTTGAGACAGAAAACAAGCTGGAGCCCGAGCGCAAAACCCAGCTGGCCAAAAAGCTGGGGCTGCAGCCCAGACAGGTGGCTGTATGGTTCCAAAACCGCCGTGCCCGGTGGAAGACCAAGCAGCTCGAGAGGGATTATGATCAGCTCAAATCCTCTTATGACTCCCTTCTCTCTGATTTTGACTCCGTTCGCAAAGATAACGATAAGCTCAAATCTGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTTTCATTGATGGAAAAGTTACAGGGGAAAGTGGTTGGAGGAGCAGGGGGAAATGAAAAATCTGACATCTTGGAGGTGGATGCTATGACGATCCTTCAAGTGAAGGTGAAGGCTGAGGACCGGTTGAGCAGTGGCAGTGGTGGGAGCGCGGTGGTAGATGAGCATAGTCCACAGCTGGTGGACAGTGGGGACTCATATTTTCACACTGATCATGAGGAGTATCCAGGGCCTGGAGGATGCAATGTTCCTCCACCCATGGATGGTTTACAATCGGAGGAAGATGATGGTAGTGATGATCATGGCAGTTGCCATGGCTACTTCTCTAACGTCTTTGTGGCAGAAGAGCAGCACCATGAACAAGGAGAAGAGCCTATTGGATGGTTCTGGTCTTAATTGAATTTTAGAATATTATATTACAGTTTTTCTTATCTACGCGCGCTTTGTATGATGAAATAAGTGTCGTAATTCCAACTTCTTATTTAAACATCTATTAATATGCTTTTGCAGCTTTTAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U581824" ref_strand="+" ref_description="SGN-U581824 Tomato 200607#2 [5 ESTs aligned] (*GB) gi|211853240|emb|CAP16664.1| (e_value=5e-32) homeodomain; (*ATH) AT3G01470.1 (e_value=8e-15)  Symbol: None | homeobox-leucine zipper protein 5 (HAT5) / HD-ZIP protein 5 / HD-ZIP protein (HB-1), identical to homeobox-leucine zipper protein HAT5 (HD-ZIP protein 5) (HD-ZIP protein ATHB-1) GB:Q02283 (Arabidopsis thaliana) | chr3:182567-184410 RE... ; (*SWP) sp|Q02283|HAT5_ARATH (e_value=7e-14) Homeobox-leucine zipper protein HAT5 OS=Arabidopsis thaliana GN=HAT5; ">
      <seq>ggacaaaacagcacatatatatagagacaaaatcacataatacgccctcgccggaatcttattttcactgtcgccggccgttaaaactttttttttctagttcggaggtcaaataattaacctccgatcggaagaagtagttattctaactgcttctatttaatctgaaaacgggaaaacccctgagctggttaaggtggatttcgtgatgggattttgtatttgtcctttggaaactcctgctagattactgtggagtactagtttcttccgccacaagcttatgctcttctaaaacttagtcaactctcttttttcatacacatccctgctaaaaaagaagaactctgtgctggagtttttgttttcctttttctgtttcgccggaaacatataaataatcttctgtgtgtaaataggcgattttccagatagttgaaaatatgggatctgggcatatatttttcgacccgtcgtcgtgtcacggcaacatgctgttccttgggagcggagatcctgttttccgaggaccaagatcgacgatgatgaagatggaggactcctcgaagaggcgacccttctttagctcgccggaggatctatatgacgaggaatactacgacgagcagtcaccggagaagaagcgccgtctcactcctgagcaggttgtttcattgatggaaaagttacaggggaaagtggttggaggagcagggggaaatgaaaaatctgacatcttggaggtggatgctatgacgatccttcaagtgaaggtgaaggctgaggaccggttgagcagtggcagtggtgggagcgcggtggtaaatgaacatagtccacagctggtggacagtggggactcatattttcacactgatcatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E02.1" temp_strand="+" temp_description="C02HBa0236E02.1  AC215430.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E02 sequenced_by:kribb upload_account_name:korea">
        <position start="101330" stop="105178"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="101628" g_stop="102155" g_length="528"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="528" r_length="528" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="102156" i_stop="102705" i_length="550">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="102706" g_stop="102842" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="529" r_stop="665" r_length="137" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="102843" i_stop="104660" i_length="1818">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="104661" g_stop="104878" g_length="218"/>
          <reference_exon_boundary r_type="cDNA" r_start="666" r_stop="883" r_length="218" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E02.1" gen_strand="+" ref_id="SGN-U581824" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>883</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U581824" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="101628" e_stop="102155"/>
          <exon e_start="102706" e_stop="102842"/>
          <exon e_start="104661" e_stop="104878"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTACAAAACAGCACATATATATAGAGACAAAATCACATAATACGCCCTCGCCGGAATCTTATTTTCACTGTCGCCGGCCGTTAAAACTTTTTTTTTCTAGTTCGGAGGTCAAATAATTAACCTCCGATCGGAAGAAGTAGTTATTCTAACTGCTTCTATTTAATCTGAAAACGGGAAAACCCCTGAGCTGGTTAAGGTGGATTTCGTGATGGGATTTTGTATTTGTCCTTTGGAAACTCCTGCTAGATTACTGTGGAGTACTAGTTTCTTCCGCCACAAGCTTATGCTCTTCTAAAACTTAGTCAACTCTCTTTTTTCATACACATCCCTGCTAAAAAAGAAGAACTCTGTGCTGGAGTTTTTGTTTTCCTTTTTCTGTTTCGCCGGAAACATATAAATAATCTTCTGTGTGTAAATAGGCGATTTTCCAGATAGTTGAAAATATGGGATCTGGGCATATATTTTTCGACCCGTCGTCGTGTCACGGCAACATGCTGTTCCTTGGGAGCGGAGATCCTGTTTTCCGAGGTATTCTCTAATCATTATGTTCTCTATTCCAATTACTTATATTACTATGAAAATATAATTTAAGAACTTTTTTGATGACTCAATTCCACTATTAAAATTGAAAGTAAAGTATGTATATGATATGAGTAACACTATCACTAGAAAGTGAAATTCGTCTTGATCTGATTTAATTTTTTTGAATGATGTAAATTTTATTATTCAAATTTACAACCAAAACAAGTATAGAAATATTTTGTCCAAGTTAATTTATTCTGAATCGTACAAGATGAAACGAAGCGGTTAACTTGTAGGGTAACCTGCGATAGATGATTTATAATTTCAGTGTACGAAGAGGTTAAGATATACGTAGATCCTTCGTACATATTTTTATAAGTTGTTTCAGATAGATAGTTTTAAATTCAATTCACTTAGGGTATTGTTTTTATAGATTGATTATCTCTAGTACAGTAAAAATAATGATAAAATTGTAACAACCTTTTTGCATGTAAGTTCTAAGGGTGGCCTTTTATACTATTCTATTTTGAAGCTTGACTTATATTGATTGATACAGGACCAAGATCGACGATGATGAAGATGGAGGACTCCTCGAAGAGGCGACCCTTCTTTAGCTCGCCGGAGGATCTATATGACGAGGAATACTACGACGAGCAGTCACCGGAGAAGAAGCGCCGTCTCACTCCTGAGCAGGTTAGCATCCTGTTCCTCCTTTATCTACCCAAAAATATAAATTAAGTAAATGCGTTTTTTTAATAGTTCGATGGAGTAGTTATCAATTCAACATACTGTGACATATATCTCCTAGCTATCAAGATAGTTAAATTTTTTGGTTCAAATCTCACCATCACATATTTTTGGCAATTGGCCACTACATGTGAAACGATTTGTTTAGTCAAATTATAATTAAGTAACTAAAGAAGATTCCCTCTAAAGTGATTTAAGTTTTTAATTATATTGGAACATATTCACCACTATAGCATCAAATTCTTCACAATATCTACCTTTAAACCCTGAAAAGAAGAGAATTTCTTTTTTATCAACGAGCGTTTTCTTTAAGCAAAATTTTATAATTTTGTGGGATTCGATTACTTGCTGAGCAATAAGTGCATGTCCTGCGTTGTTGGGTACGTAAATGAAGGTGCACTTGTTGGAGAAGAGCTTTGAGACAGAAAACAAGCTGGAGCCCGAGCGCAAAACCCAGCTGGCCAAAAAGCTGGGGCTGCAGCCCAGACAGGTGGCTGTATGGTTCCAAAACCGCCGTGCCCGGTGGAAGACCAAGCAGCTCGAGAGGGATTATGATCAGCTCAAATCCTCTTATGACTCCCTTCTCTCTGATTTTGACTCCGTTCGCAAAGATAACGATAAGCTCAAATCTGAGGTATAACCATATAGTAATAGTGTTGTGATCATTTTATTTGCTTAGATTCTATTATACTTTGTACCAACCTCTTAACATCGATTTTTCTGGTCGATTTTTGGCATATCTATTAATACTATGTCCTTAAGGCCTTAGCTTTTGCAATACTCTATGAGAAAGAATTAACAAATCTTGGATAACACACCTGTCTTGCAACGATTTGATCAATGACAAAAAGCCGCCTTTCTTGTAACACTGGGGAGTCGGATATATATGTAGAATAATATGATGCCTTACTGAATAAAAACTAGCTAGGAGAGAGTCTATGATAATTTTTTTGTAGTATATAGTAGAATATTAAGATATGTTTGTTGACGAAATTTGTCGGCGAAGTTGGTAATTGGTAGAAATTTTAATCTGACTTTTAATTTGAGGTCATATTCTGTGTAACACCTGGCCATCAATATTAGTAGTGGGGAACCTCACAAACAATATTCTTCCTCACCTAGAATAGAAAATTATATCTGTCAATGTCCTTCTGAGTCATCTTGCATCAGAGTCAAATAAATAAAGTAGCATCTGTTCTAACCCCCCCACTTTCAATGTTTTTTTCTATTACTTGGATTTCAATTTCAAAAAAAGCGAATATACTTTTGATATATTGGGAAAACTTGCTTTAAAATATGCGTAGTGATGAAGACCTTACTATATAGATAGTGGATGTATCACTATCAGAGTTACGCTACTGTTATTTCTTAGTAAACTTTTACTAATTTATTCTTTTGCTTTTATTTTGCACCTTCGTTTTTTTAAAAGTGATGTAATAATAGGGTTATCAACAGCATATTTTTTTTTTTTACAATATTACGCTAAGTTGACTTATAACAATTGGCAACTCTTCATAATACGTCAAAGAGTTGGTATACATTGTAAGACTTGCGCATTTACGTCACACATCAAATCAAATTTTATATATAAGTTTATCACAACTTATTGTATAGTAGGTACACCTGACTTGGCTTGTATTCGAGGTTGCTAATCCCACTAAATGTGATTTTATCTTTTTAGCTTACATGATAGCGTGCAAGTAATTAAGTTGTTGTATATAGTAATAGATTTGAAACTATTTTGTTAATTGGGGAAAAATGCAGGTTGTTTCATTGATGGAAAAGTTACAGGGGAAAGTGGTTGGAGGAGCAGGGGGAAATGAAAAATCTGACATCTTGGAGGTGGATGCTATGACGATCCTTCAAGTGAAGGTGAAGGCTGAGGACCGGTTGAGCAGTGGCAGTGGTGGGAGCGCGGTGGTAGATGAGCATAGTCCACAGCTGGTGGACAGTGGGGACTCATATTTTCACACTGATCATGA</genome_strand>
        <mrna_strand>GGACAAAACAGCACATATATATAGAGACAAAATCACATAATACGCCCTCGCCGGAATCTTATTTTCACTGTCGCCGGCCGTTAAAACTTTTTTTTTCTAGTTCGGAGGTCAAATAATTAACCTCCGATCGGAAGAAGTAGTTATTCTAACTGCTTCTATTTAATCTGAAAACGGGAAAACCCCTGAGCTGGTTAAGGTGGATTTCGTGATGGGATTTTGTATTTGTCCTTTGGAAACTCCTGCTAGATTACTGTGGAGTACTAGTTTCTTCCGCCACAAGCTTATGCTCTTCTAAAACTTAGTCAACTCTCTTTTTTCATACACATCCCTGCTAAAAAAGAAGAACTCTGTGCTGGAGTTTTTGTTTTCCTTTTTCTGTTTCGCCGGAAACATATAAATAATCTTCTGTGTGTAAATAGGCGATTTTCCAGATAGTTGAAAATATGGGATCTGGGCATATATTTTTCGACCCGTCGTCGTGTCACGGCAACATGCTGTTCCTTGGGAGCGGAGATCCTGTTTTCCGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCAAGATCGACGATGATGAAGATGGAGGACTCCTCGAAGAGGCGACCCTTCTTTAGCTCGCCGGAGGATCTATATGACGAGGAATACTACGACGAGCAGTCACCGGAGAAGAAGCGCCGTCTCACTCCTGAGCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTTTCATTGATGGAAAAGTTACAGGGGAAAGTGGTTGGAGGAGCAGGGGGAAATGAAAAATCTGACATCTTGGAGGTGGATGCTATGACGATCCTTCAAGTGAAGGTGAAGGCTGAGGACCGGTTGAGCAGTGGCAGTGGTGGGAGCGCGGTGGTAAATGAACATAGTCCACAGCTGGTGGACAGTGGGGACTCATATTTTCACACTGATCATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U581825" ref_strand="+" ref_description="SGN-U581825 Tomato 200607#2 [9 ESTs aligned] (*GB) gi|211853240|emb|CAP16664.1| (e_value=7e-96) homeodomain; (*ATH) AT3G01470.1 (e_value=8e-42)  Symbol: None | homeobox-leucine zipper protein 5 (HAT5) / HD-ZIP protein 5 / HD-ZIP protein (HB-1), identical to homeobox-leucine zipper protein HAT5 (HD-ZIP protein 5) (HD-ZIP protein ATHB-1) GB:Q02283 (Arabidopsis thaliana) | chr3:182567-184410 RE... ; (*SWP) sp|Q02283|HAT5_ARATH (e_value=7e-41) Homeobox-leucine zipper protein HAT5 OS=Arabidopsis thaliana GN=HAT5; ">
      <seq>gaagatggaggactcctcgaagaggcgacccttctttagctcgccggaggatctatatgacgaggaatactacgacgagcagtcaccggagaagaagcgccgtctcactcctgagcaggttagcatcctgttcctcctttatctacccaaaaatataaattaagtaaatgcgtttttttaatagttcgatggagtagttatcaattcaacatactgtgacatatatctcctagctatcaagatagttaaattttttggttcaaatctcaccatcacatatttttggcaattggccactacatgtgaaacgatttgtttagtcaaattataattaagtaactaaagaagattccctctaaagtgatttaagtttttaattatattggaacatattcaccactatagcatcaaattcttcacaatatctacctttaaaccctgaaaagaagagaatttcttttttatcaacgagcgttttctttaagcaaaattttataattttgtgggattcgattacttgctgagcaataagtgcatgtcctgcgttgttgggtacgtaaatgaaggtgcacttgttggagaagagctttgagacagaaaacaagctggagcccgagcgcaaaacccagctggccaaaaagctggggctgcagcccagacaggtggctgtatggttccaaaaccgccgtgcccggtggaagaccaagcagctcgagagggattatgatcagctcaaatcctcttatgactcccttctctctgattttgactccgttcgcaaagataacgataagctcaaatctgaggttgtttcattgatggaaaagttacaggggaaagtggttggaggagcagggggaaatgaaaaatctgacatcttggaggtggatgctatgacgatccttcaagtgaaggtgaaggctgaggaccggttgagcagtggcagtggtgggagcgcggtggtagatgagcatagtccacagctggtggacagtggggactcatattttcacactgatcatgaggagtatccagggcctggaggatgcaatgttcctccacccatggatggtttacaatcggaggaagatgatggtagtgatgatcatggcagttgccatggctacttctctaacgtctttgtggcagaagagcagcaccatgaacaaggagaagagcctattggatggttctggtcttaattgaattttagaatattatattacagtttttcttatctacgcgcgctttgtatgatgaaataagtgtcgtaattccaacttcttatttaaacatctattaatatgcttttgcagcttttattctcttgattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E02.1" temp_strand="+" temp_description="C02HBa0236E02.1  AC215430.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E02 sequenced_by:kribb upload_account_name:korea">
        <position start="102425" stop="105488"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102725" g_stop="103530" g_length="806"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="806" r_length="806" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="103531" i_stop="104660" i_length="1130">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="104661" g_stop="105188" g_length="528"/>
          <reference_exon_boundary r_type="cDNA" r_start="807" r_stop="1334" r_length="528" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E02.1" gen_strand="+" ref_id="SGN-U581825" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1334</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U581825" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102725" e_stop="103530"/>
          <exon e_start="104661" e_stop="105188"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGATGGAGGACTCCTCGAAGAGGCGACCCTTCTTTAGCTCGCCGGAGGATCTATATGACGAGGAATACTACGACGAGCAGTCACCGGAGAAGAAGCGCCGTCTCACTCCTGAGCAGGTTAGCATCCTGTTCCTCCTTTATCTACCCAAAAATATAAATTAAGTAAATGCGTTTTTTTAATAGTTCGATGGAGTAGTTATCAATTCAACATACTGTGACATATATCTCCTAGCTATCAAGATAGTTAAATTTTTTGGTTCAAATCTCACCATCACATATTTTTGGCAATTGGCCACTACATGTGAAACGATTTGTTTAGTCAAATTATAATTAAGTAACTAAAGAAGATTCCCTCTAAAGTGATTTAAGTTTTTAATTATATTGGAACATATTCACCACTATAGCATCAAATTCTTCACAATATCTACCTTTAAACCCTGAAAAGAAGAGAATTTCTTTTTTATCAACGAGCGTTTTCTTTAAGCAAAATTTTATAATTTTGTGGGATTCGATTACTTGCTGAGCAATAAGTGCATGTCCTGCGTTGTTGGGTACGTAAATGAAGGTGCACTTGTTGGAGAAGAGCTTTGAGACAGAAAACAAGCTGGAGCCCGAGCGCAAAACCCAGCTGGCCAAAAAGCTGGGGCTGCAGCCCAGACAGGTGGCTGTATGGTTCCAAAACCGCCGTGCCCGGTGGAAGACCAAGCAGCTCGAGAGGGATTATGATCAGCTCAAATCCTCTTATGACTCCCTTCTCTCTGATTTTGACTCCGTTCGCAAAGATAACGATAAGCTCAAATCTGAGGTATAACCATATAGTAATAGTGTTGTGATCATTTTATTTGCTTAGATTCTATTATACTTTGTACCAACCTCTTAACATCGATTTTTCTGGTCGATTTTTGGCATATCTATTAATACTATGTCCTTAAGGCCTTAGCTTTTGCAATACTCTATGAGAAAGAATTAACAAATCTTGGATAACACACCTGTCTTGCAACGATTTGATCAATGACAAAAAGCCGCCTTTCTTGTAACACTGGGGAGTCGGATATATATGTAGAATAATATGATGCCTTACTGAATAAAAACTAGCTAGGAGAGAGTCTATGATAATTTTTTTGTAGTATATAGTAGAATATTAAGATATGTTTGTTGACGAAATTTGTCGGCGAAGTTGGTAATTGGTAGAAATTTTAATCTGACTTTTAATTTGAGGTCATATTCTGTGTAACACCTGGCCATCAATATTAGTAGTGGGGAACCTCACAAACAATATTCTTCCTCACCTAGAATAGAAAATTATATCTGTCAATGTCCTTCTGAGTCATCTTGCATCAGAGTCAAATAAATAAAGTAGCATCTGTTCTAACCCCCCCACTTTCAATGTTTTTTTCTATTACTTGGATTTCAATTTCAAAAAAAGCGAATATACTTTTGATATATTGGGAAAACTTGCTTTAAAATATGCGTAGTGATGAAGACCTTACTATATAGATAGTGGATGTATCACTATCAGAGTTACGCTACTGTTATTTCTTAGTAAACTTTTACTAATTTATTCTTTTGCTTTTATTTTGCACCTTCGTTTTTTTAAAAGTGATGTAATAATAGGGTTATCAACAGCATATTTTTTTTTTTTACAATATTACGCTAAGTTGACTTATAACAATTGGCAACTCTTCATAATACGTCAAAGAGTTGGTATACATTGTAAGACTTGCGCATTTACGTCACACATCAAATCAAATTTTATATATAAGTTTATCACAACTTATTGTATAGTAGGTACACCTGACTTGGCTTGTATTCGAGGTTGCTAATCCCACTAAATGTGATTTTATCTTTTTAGCTTACATGATAGCGTGCAAGTAATTAAGTTGTTGTATATAGTAATAGATTTGAAACTATTTTGTTAATTGGGGAAAAATGCAGGTTGTTTCATTGATGGAAAAGTTACAGGGGAAAGTGGTTGGAGGAGCAGGGGGAAATGAAAAATCTGACATCTTGGAGGTGGATGCTATGACGATCCTTCAAGTGAAGGTGAAGGCTGAGGACCGGTTGAGCAGTGGCAGTGGTGGGAGCGCGGTGGTAGATGAGCATAGTCCACAGCTGGTGGACAGTGGGGACTCATATTTTCACACTGATCATGAGGAGTATCCAGGGCCTGGAGGATGCAATGTTCCTCCACCCATGGATGGTTTACAATCGGAGGAAGATGATGGTAGTGATGATCATGGCAGTTGCCATGGCTACTTCTCTAACGTCTTTGTGGCAGAAGAGCAGCACCATGAACAAGGAGAAGAGCCTATTGGATGGTTCTGGTCTTAATTGAATTTTAGAATATTATATTACAGTTTTTCTTATCTACGCGCGCTTTGTATGATGAAATAAGTGTCGTAATTCCAACTTCTTATTTAAACATCTATTAATATGCTTTTGCAGCTTTTATTCTCTTGATTT</genome_strand>
        <mrna_strand>GAAGATGGAGGACTCCTCGAAGAGGCGACCCTTCTTTAGCTCGCCGGAGGATCTATATGACGAGGAATACTACGACGAGCAGTCACCGGAGAAGAAGCGCCGTCTCACTCCTGAGCAGGTTAGCATCCTGTTCCTCCTTTATCTACCCAAAAATATAAATTAAGTAAATGCGTTTTTTTAATAGTTCGATGGAGTAGTTATCAATTCAACATACTGTGACATATATCTCCTAGCTATCAAGATAGTTAAATTTTTTGGTTCAAATCTCACCATCACATATTTTTGGCAATTGGCCACTACATGTGAAACGATTTGTTTAGTCAAATTATAATTAAGTAACTAAAGAAGATTCCCTCTAAAGTGATTTAAGTTTTTAATTATATTGGAACATATTCACCACTATAGCATCAAATTCTTCACAATATCTACCTTTAAACCCTGAAAAGAAGAGAATTTCTTTTTTATCAACGAGCGTTTTCTTTAAGCAAAATTTTATAATTTTGTGGGATTCGATTACTTGCTGAGCAATAAGTGCATGTCCTGCGTTGTTGGGTACGTAAATGAAGGTGCACTTGTTGGAGAAGAGCTTTGAGACAGAAAACAAGCTGGAGCCCGAGCGCAAAACCCAGCTGGCCAAAAAGCTGGGGCTGCAGCCCAGACAGGTGGCTGTATGGTTCCAAAACCGCCGTGCCCGGTGGAAGACCAAGCAGCTCGAGAGGGATTATGATCAGCTCAAATCCTCTTATGACTCCCTTCTCTCTGATTTTGACTCCGTTCGCAAAGATAACGATAAGCTCAAATCTGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTTTCATTGATGGAAAAGTTACAGGGGAAAGTGGTTGGAGGAGCAGGGGGAAATGAAAAATCTGACATCTTGGAGGTGGATGCTATGACGATCCTTCAAGTGAAGGTGAAGGCTGAGGACCGGTTGAGCAGTGGCAGTGGTGGGAGCGCGGTGGTAGATGAGCATAGTCCACAGCTGGTGGACAGTGGGGACTCATATTTTCACACTGATCATGAGGAGTATCCAGGGCCTGGAGGATGCAATGTTCCTCCACCCATGGATGGTTTACAATCGGAGGAAGATGATGGTAGTGATGATCATGGCAGTTGCCATGGCTACTTCTCTAACGTCTTTGTGGCAGAAGAGCAGCACCATGAACAAGGAGAAGAGCCTATTGGATGGTTCTGGTCTTAATTGAATTTTAGAATATTATATTACAGTTTTTCTTATCTACGCGCGCTTTGTATGATGAAATAAGTGTCGTAATTCCAACTTCTTATTTAAACATCTATTAATATGCTTTTGCAGCTTTTATTCTCTTGATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U565884" ref_strand="+" ref_description="SGN-U565884 Tomato 200607#2 [11 ESTs aligned] (*GB) gi|157345492|emb|CAO14790.1| (e_value=6e-115) unnamed; (*ATH) AT5G14790.1 (e_value=1e-93) | Symbol: None | expressed protein | chr5:4782949-4785808 FORWARD | Aliases: T9L3.90, T9L3_90; ">
      <seq>cccaattttggtgtgaaatagcgccgtctcattctactgttctcgccggttacaaatatctcttttctactctctctgtctattactcttcactcactatacacataaaatcctccattgtttagtaggttaaaatctgcttgtcgttgaagaggagagttcaaaatcatttcgatttgctgctttacccgatcatttcaccgcattttcctgatctaatccatatatgatgtctgaggaagctgctagagatctcattccactacctgaagctgggatgaacaatgagatccccagtaatgggagtgttccagcaataagggttgagagcattgataaaaattcaaaagataaggaaagagaaaatcctgccttactggttggaccttgccttaatggagacggtaaggtgaatactggggcagaggtgggaaattctgaagtggaatacatagaatctgagaatttgaatgatgtagaagatgttgacacaagtctcaagacactgttgactgggcttgactccaaggactgggttttagtctgtgaggcactcaatgacgttcggcgtctgtccctatttcacaaagaagcaatggttgatatgttgagaaatgtgatctcccttgttgtgaaatctttgaaaaatccgagaagtgctgtttgtaagactgctattatggcatcagctgacattttcaaagcatactgtgacaccatagttgacttgatggatccactgcttgtacaacttcttctgaagtcttcacaagacaagcgatttgtttgcgaggcagctgaaaaagctctaaaagcaatgacaatgtgggtttctccatcgctgttgttaccgaagttgcaaccaaatttgaaacacagaaatcctagaattcgagcaaaagcttcaagctgcttttctcgaagtgtaccacgtctgggagtagagggaattaaagcatatggaattgagaacttgatccgaatagctgcatcgcagctcaatgaccagcttcctgagtcgagggaggccgctcgttcactgttgttagaactgcaaaatatctacgaaaaagcattcaatgttatccccccaccagtagtgaatgaagacccagaaacaattaccgtgagtgaggacccagaaacaatatcctgggagcatttctgtcaatcaaagctctcacctttgagtgctcaagcagttcttcgtgtaaccaatctcactagggagggtattgttttaggttcatagtatttgttcaagcaatgagctataattcaccattgtcctccattttttggtttggtttcttatacctgtatataccatgaaaggtttcaggtgtttgcgaggcagttagaccatatatagagctatagttctatagtttcttgaaatatggtttagattacgtttgcattatacttaaagtcattcatgaatgcttgctttgcattgcagtatacatgtaattgtgctcgttcatttttcccatggtatgttaatgattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E02.1" temp_strand="+" temp_description="C02HBa0236E02.1  AC215430.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E02 sequenced_by:kribb upload_account_name:korea">
        <position start="108262" stop="112952"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108562" g_stop="108774" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="213" r_length="213" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108775" i_stop="110227" i_length="1453">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.912" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="110228" g_stop="110516" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="214" r_stop="502" r_length="289" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="110517" i_stop="110637" i_length="121">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="110638" g_stop="110744" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="503" r_stop="609" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="110745" i_stop="110878" i_length="134">
            <donor d_prob="0.878" d_score="1.00"/>
            <acceptor a_prob="0.849" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="110879" g_stop="111011" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="610" r_stop="742" r_length="133" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="111012" i_stop="111113" i_length="102">
            <donor d_prob="0.949" d_score="1.00"/>
            <acceptor a_prob="0.785" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="111114" g_stop="111308" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="743" r_stop="937" r_length="195" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="111309" i_stop="112077" i_length="769">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="112078" g_stop="112652" g_length="575"/>
          <reference_exon_boundary r_type="cDNA" r_start="938" r_stop="1512" r_length="575" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E02.1" gen_strand="+" ref_id="SGN-U565884" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1512</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U565884" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108562" e_stop="108774"/>
          <exon e_start="110228" e_stop="110516"/>
          <exon e_start="110638" e_stop="110744"/>
          <exon e_start="110879" e_stop="111011"/>
          <exon e_start="111114" e_stop="111308"/>
          <exon e_start="112078" e_stop="112652"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCAATTTTGGTGTGAAATAGCGCCGTCTCATTCTACTGTTCTCGCCGGTTACAAATATCTCTTTTCTACTCTCTCTGTCTATTACTCTTCACTCACTATACACATAAAATCCTCCATTGTTTAGTAGGTTAAAATCTGCTTGTCGTTGAAGAGGAGAGTTCAAAATCATTTCGATTTGCTGCTTTACCCGATCATTTCACCGCATTTTCCTGGTATGCTCAATCTTCGCTTACTCTGTTTATTTATTAGTTTATAGGTATGTTAAAGAGGTAGTATTGTACATTCGAATTACTAAAGCCCCTAAACATTGCATTTTTTGTAAATCGCTGATGGAGTAATCAAGTTGTATAGGTTTGTTGATTGTATTTGCTTTGAAGTTGCTAACTACGATCTGCGAAGGTTATTCTCTCTGAGATCTTGGCTATTCTACTTTAATACGTTTTGGATTGTTTTACTTTGTAGATAGTGCTTGTTGGAGTTGATTGTTCTGATCCTGTAATGTAGATGCGATTTTTTTGCCGTTACTATTATTAATACGAGGAATTTTTCCGTTAGTGATTATTTGTAAATAGTTTAATGGAGTTTGATGTGTCTAATCATTGTTATAATAGTGATTCGAAGTGCTTTGTTGCTAACTTGGATGGACAAAAATAAGCTAACTATTTCATTTGGGCTTAACTTAGGGTTTCGTTCTTTTTCTTAAAAGGTTTCTGCAGCATGATTTGAGTAAAAACTTGCGTGATTTGTACATTGGCAACATCTATTCTACTTAATTTACTGGCTGAAGGATTTTCACACCCAATGCTACCAATTGAAAACAAAGTAGTGTTGTCAAACCTTCAATCTTGAAGTTCATCAAATAAGAAATTGGATTGTTCATTCAGAAATATTAGATCACTATGTTACTTGTTCCTTTTTTTTCTTCTCAAAGGCATTAGATTATTGTGTGCGCTTTCCAGTTCTCCAGCCAATGCTACATCATTTACTTGATAATGTGAGTCCCCTAGTGGTGTCATGCCAGCTTAGGTACCTTGACTAATCCACTAGGTAACATTCTACACTGAAGCAAATCAGCTCTTTCCAGGTGTTATAACTGGTAGTTTGAACCTGGAATCTTCAGGTTGATACTTCTATGCCTAAACTATTCAGCTATCTTCAGGTGTTATAACTGGTAGTTTGAACCTGGAAGCCTTAATAGCTGTATTCTCTAGGATACTGTTCCGCTAAGAAAATTACAATTATCAGTGAAGCCTTGTGAGATTGATATTATCTTCCATCGATCATAAACAAAAACTTCAGTAGAAGAACTAAGTATTGATATGGAAAATTAGGTAAGGGACCTTGAAAGAAAAAAAAGTAAGTTACTGGAATGACCACAAATATGAAAAGGCATTACTGAGGTCCAAAAGTTAGTTCTAAAATCCCCGGAGTTCAAATATCTGTTTATTATGTTGTTTTCTCTTCTCCAGAGTTCACATATCAGTTTATTATATTGTTTTCTCCTCTTCTCTGGAGTTCACATATCTGTTTATTATGTTGCATTCTCCTCTTCTCCGGAGTTCACATATCTGTTTAGCTTTCTTCTCTTCTATTCGACCGGAAATGATTTCTTAAGTGCATTGCTGACGTGGCTCATAAAAACCCTTTACACTGCTGGTATTTCAGATCTAATCCATATATGATGTCTGAGGAAGCTGCTAGAGATCTCATTCCACTACCTGAAGCTGGGATGAACAATGAGATCCCCAGTAATGGGAGTGTTCCAGCAATAAGGGTTGAGAGCATTGATAAAAATTCAAAAGATAAGGAAAGAGAAAATCCTGCCTTACTGGTTGGACCTTGCCTTAATGGAGACGGTAAGGTGAATACTGGGGCAGAGGTGGGAAATTCTGAAGTGGAATACATAGAATCTGAGAATTTGAATGATGTAGAAGATGTTGACACAAGTCTCAAGGTAATGATTCCTGATATAGTTTGATGTTTCATTTTAGTATTTTGCATCTCGGTTTTGCTTCTTTATATTGGTTTACAAAAGTCTCTTTTCAATGTCTTTGCCTCTCCTTTTTCATTTGTAGACACTGTTGACTGGGCTTGACTCCAAGGACTGGGTTTTAGTCTGTGAGGCACTCAATGACGTTCGGCGTCTGTCCCTATTTCACAAAGAAGCAATGGTTGATATGTTGTAAGTCTTTGTCACCTAGGATATAACTTGAAAGATGTTTGATCATGATGTTCTAGCTGGTTAGACATATCTTTGTGTATGCTCCCCTTTTGTTCTGTCTGGTCTTACTTATGCTTATTACTTAAAATGAGCAGGAGAAATGTGATCTCCCTTGTTGTGAAATCTTTGAAAAATCCGAGAAGTGCTGTTTGTAAGACTGCTATTATGGCATCAGCTGACATTTTCAAAGCATACTGTGACACCATAGTTGACTTGATGGATCCACTGGTAACTTTTCTCTTTTGTGACTTGTGTGACTGCCTTGGCAATATATTTTCACCTAATTTTACCTTGTTCTTGTGCTTATTATGTGACTGTTTCCTTGCTTAGCTTGTACAACTTCTTCTGAAGTCTTCACAAGACAAGCGATTTGTTTGCGAGGCAGCTGAAAAAGCTCTAAAAGCAATGACAATGTGGGTTTCTCCATCGCTGTTGTTACCGAAGTTGCAACCAAATTTGAAACACAGAAATCCTAGAATTCGAGCAAAAGCTTCAAGCTGCTTTTCTCGAAGTGTACCACGTCTGGTGAGAGTTCAAAGTTCTAAAATCTCTTCCTTATGCACCCTGACTTGTGAATTTTAGTAATTACTATTTTCATTCTTACATTTTTTTCCTGCAATTGTTGTTAACGTAGTTTGTTTGTTATTTGCTGACTAATATCTTTTCCCTTGACTGTTTTATAGACAATATCTTGATACAAACTCCACCCTAGGAAACCCTTCTTGAGAGCGTTTTAAGAATTACTTCTTGAGAATGTTTACTAATTACTTTACTGGTTAAAGGAATGGATAGGTAATAATTTGTTTATCTGCTGACTCTGACTAAGATCTTTCCCTTGGCTATGTTTTATTGACAATGCCTTGATGCTGAACTCTACCCTAGTAGGACACCCTTCTTGAGAGCGTTTGAAGAATGAATTTTTCTGATTAAGGAAATGACTAGGTAACAATTTGTCAGTCATTTGAGTATATTAGGAACTTTTACATGGTTTCTCCAATAAGTTTTGTTCACAATGCTATAATTAACCGCTTTCAATACCCTTCTGGTGGTTATTTTATTATTCAGCAGTATAAATTTGTTCTTGTTGAATGAAACAAGAAAGATTACATATTAACGGCCCCTTAACATGGAAACATTTTCTGGCATTTGTGTCTTTTCATGTATGATCATATCACTGAAATGTGAAAGAGGAATAAACTTTGTCCTGTTCTTAGTTTTTGTTTTCTAGCTGGTTGCCCAATTCTCTTTTTACTACTAGATCTGGTCCTTACTAACAGAGTTGCATGTTTTACAGGGAGTAGAGGGAATTAAAGCATATGGAATTGAGAACTTGATCCGAATAGCTGCATCGCAGCTCAGTGACCAGCTTCCTGAGTCGAGGGAGGCCGCTCGTTCACTGTTGTTAGAACTGCAAAATATCTACGAAAAAGCATTCAATGTTATCCCCCCACCAGTAGTGAATGAAGACCCAGAAACAATTACCGTGAGTGAGGACCCAGAAACAATATCCTGGGAGCATTTCTGTCAATCAAAGCTCTCACCTTTGAGTGCTCAAGCAGTTCTTCGTGTAACCAATCTCACTAGGGAGGGTATTGTTTTAGGTTCATAGTATTTGTTCAAGCAATGAGCTATAATTCACCATTGTCCTCCATTTTTTGGTTTGGTTTCTTATACCTGTATATACCATGAAAGGTTTCAGGTGTTTGCGAGGCAGTTAGACCATATATAGAGCTATAGTTCTATAGTTTCTTGAAATATGGTTTAGATTACGTTTGCATTATACTTAAAGTCATTCATGAATGCTTGCTTTGCATTGCAGTATACATGTAATTGTGCTCGTTCATTTTTCCCATGGTATGTTAATGATTG</genome_strand>
        <mrna_strand>CCCAATTTTGGTGTGAAATAGCGCCGTCTCATTCTACTGTTCTCGCCGGTTACAAATATCTCTTTTCTACTCTCTCTGTCTATTACTCTTCACTCACTATACACATAAAATCCTCCATTGTTTAGTAGGTTAAAATCTGCTTGTCGTTGAAGAGGAGAGTTCAAAATCATTTCGATTTGCTGCTTTACCCGATCATTTCACCGCATTTTCCTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTAATCCATATATGATGTCTGAGGAAGCTGCTAGAGATCTCATTCCACTACCTGAAGCTGGGATGAACAATGAGATCCCCAGTAATGGGAGTGTTCCAGCAATAAGGGTTGAGAGCATTGATAAAAATTCAAAAGATAAGGAAAGAGAAAATCCTGCCTTACTGGTTGGACCTTGCCTTAATGGAGACGGTAAGGTGAATACTGGGGCAGAGGTGGGAAATTCTGAAGTGGAATACATAGAATCTGAGAATTTGAATGATGTAGAAGATGTTGACACAAGTCTCAAG.........................................................................................................................ACACTGTTGACTGGGCTTGACTCCAAGGACTGGGTTTTAGTCTGTGAGGCACTCAATGACGTTCGGCGTCTGTCCCTATTTCACAAAGAAGCAATGGTTGATATGTT......................................................................................................................................GAGAAATGTGATCTCCCTTGTTGTGAAATCTTTGAAAAATCCGAGAAGTGCTGTTTGTAAGACTGCTATTATGGCATCAGCTGACATTTTCAAAGCATACTGTGACACCATAGTTGACTTGATGGATCCACTG......................................................................................................CTTGTACAACTTCTTCTGAAGTCTTCACAAGACAAGCGATTTGTTTGCGAGGCAGCTGAAAAAGCTCTAAAAGCAATGACAATGTGGGTTTCTCCATCGCTGTTGTTACCGAAGTTGCAACCAAATTTGAAACACAGAAATCCTAGAATTCGAGCAAAAGCTTCAAGCTGCTTTTCTCGAAGTGTACCACGTCTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGTAGAGGGAATTAAAGCATATGGAATTGAGAACTTGATCCGAATAGCTGCATCGCAGCTCAATGACCAGCTTCCTGAGTCGAGGGAGGCCGCTCGTTCACTGTTGTTAGAACTGCAAAATATCTACGAAAAAGCATTCAATGTTATCCCCCCACCAGTAGTGAATGAAGACCCAGAAACAATTACCGTGAGTGAGGACCCAGAAACAATATCCTGGGAGCATTTCTGTCAATCAAAGCTCTCACCTTTGAGTGCTCAAGCAGTTCTTCGTGTAACCAATCTCACTAGGGAGGGTATTGTTTTAGGTTCATAGTATTTGTTCAAGCAATGAGCTATAATTCACCATTGTCCTCCATTTTTTGGTTTGGTTTCTTATACCTGTATATACCATGAAAGGTTTCAGGTGTTTGCGAGGCAGTTAGACCATATATAGAGCTATAGTTCTATAGTTTCTTGAAATATGGTTTAGATTACGTTTGCATTATACTTAAAGTCATTCATGAATGCTTGCTTTGCATTGCAGTATACATGTAATTGTGCTCGTTCATTTTTCCCATGGTATGTTAATGATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U584019" ref_strand="+" ref_description="SGN-U584019 Tomato 200607#2 [38 ESTs aligned] (*GB) gi|29373073|gb|AAO72532.1| (e_value=0) aldehyde dehydrogenase 1 precursor [Lotus corniculatus]; (*ATH) AT3G48000.1 (e_value=2e-177)  Symbol: None | aldehyde dehydrogenase (ALDH2), identical to aldehyde dehydrogenase (Arabidopsis thaliana) GI:8574427; similar to mitochondrial aldehyde dehydrogenase (Arabidopsis thaliana) gi:19850249:gb:AAL99612; identical to cDNA aldehyde dehydrog... ; (*SWP) sp|Q9SU63|AL2B4_ARATH (e_value=2e-176) Aldehyde dehydrogenase family 2 member B4, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B4; ">
      <seq>cggttcaattttgaatgctctctctttatgtaaacattatgctttgtatgaaataaaggtcctctaagatttctgtaagcaactttgaaaatttctttaggtactccaactactggagaaagggtatcagaaggttttgtagcagtgccgtggtgcatgaagagccaatcactccacctgttgaggttaaatataatcagcttctcattaatggacagtttgttgatgcagcctcagggaagacatttcctacatttgaccctcgaacaggcgaagctattactacggttgcggaggccgacactgaagatgtcaaccgtgcagtctttgctgcccgtaaagcatttgatgaaggaccatggcctaaaatgacttgaaaggtcatgtataatgttgcagtttgctgatttgcttgagaggcacagtgatgaacttgcagcacttgagacttgggataagggaaagccttacgaacaagctgcaaatgaagaaataccaatgctcattcgtcttttcagatactatgctggttaagaaaataagaaaaatggcgttatgtttccttttgacagtttaataaccacttattgtatatcaattgacgttctaatgtttgctgaatcaccctaaatgcttttctaagtatttctgcttacatttcttattcaggttgggctgataaaattcatggtcttacagctcctgctgacagtttgcaccatgttcagaccctgcatgagccaattggtgttgcaggacagataataccctggaattttccgttattaatgttcgcctggaaagttggccctgcacttgcttgtggtaacactgtcgtactaaaaccagcagaacaaacaccactctctgccctgtatgtgtcaaagttattccatgaggttggacttccccctggagtcttaaatgtcattcctggatccggtagtgcaggtgcagatcttgccagtcatatggatgtcgataagattgcttttacagggtccacagaaactggtaaagctgtcgtaggtgcagctgcaaagagcaacctaaaacctgtgacattggagctcggaggaaaatctcctttcatcatttgtgaagatgcagacgttgataaagctgttgagttggctcattctgctgttttctttaaccagggacaatgctgctgtgctggatctcggacattcgtacatgaaagagtatatgatgaatttgtggagaaagccaaagctcgtgctttaaaacgcattgttggagaccctttcaagaagggagttgaacaaggtccgcagattgatacagagcaatttgagaagatcctgaagtacataaaatctggtactgaaagcggggctactctcgagtctggaggggaaaaattgggttccaagggcttctatgtccaacctactgtcttctcaaatgtccaggataacatgctgattgccagagatgagatatttggaccagtgcagtccctcttgaaattcaaggatgttgaagaggtcatccgaagggcaaactcgtcacattatgggttggcagcgggtgtttttacccagaatatagatgcagccaacacaatatctcgagcccttagagtagggacagtgtgggttaactgctttaacatctttgatgctgccattccgtttggtggttataagatgagtggacatggaagagagaagggagtctacagcctaagtaactacttgcaagtcaaagctattgttacccctctgaagaatccagcatggctgtagttttcccccctgctttctggtactcctgagatgtcgtgcaacacggcaatcttgtcttttagaggtcacttgtatacagtgtagataagaccaaaacgctgtattgtgtgtgtgttattgtttgttactaacttcttatgatttgataacaatatgcaaacttgtttgtgtgagacctttcttgatttctgtagctctgatgcaaaataggatcttgtgtttgagttttgtgggaatgtaatgaattatatatagatgtaatgttataattctatattactacggt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E02.1" temp_strand="-" temp_description="C02HBa0236E02.1  AC215430.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E02 sequenced_by:kribb upload_account_name:korea">
        <position start="123447" stop="117168"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="123147" g_stop="123052" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="96" r_length="96" r_score="0.969"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="123051" i_stop="121370" i_length="1682">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.901" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="121369" g_stop="121229" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="97" r_stop="237" r_length="141" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="121228" i_stop="121150" i_length="79">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.750" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="121149" g_stop="121012" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="238" r_stop="375" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="121011" i_stop="120560" i_length="452">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.922" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="120559" g_stop="120036" g_length="524"/>
          <reference_exon_boundary r_type="cDNA" r_start="376" r_stop="899" r_length="524" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="120035" i_stop="119817" i_length="219">
            <donor d_prob="0.959" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="119816" g_stop="119730" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="900" r_stop="986" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="119729" i_stop="119087" i_length="643">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="119086" g_stop="118913" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="987" r_stop="1160" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="118912" i_stop="118834" i_length="79">
            <donor d_prob="0.933" d_score="1.00"/>
            <acceptor a_prob="0.857" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="118833" g_stop="118696" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="1161" r_stop="1298" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="118695" i_stop="118416" i_length="280">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="118415" g_stop="118278" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="1299" r_stop="1436" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="118277" i_stop="118169" i_length="109">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="118168" g_stop="118107" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="1437" r_stop="1498" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="118106" i_stop="118028" i_length="79">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.920" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="118027" g_stop="117468" g_length="560"/>
          <reference_exon_boundary r_type="cDNA" r_start="1499" r_stop="2058" r_length="560" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E02.1" gen_strand="-" ref_id="SGN-U584019" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>2058</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U584019" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="123147" e_stop="123052"/>
          <exon e_start="121369" e_stop="121229"/>
          <exon e_start="121149" e_stop="121012"/>
          <exon e_start="120559" e_stop="120036"/>
          <exon e_start="119816" e_stop="119730"/>
          <exon e_start="119086" e_stop="118913"/>
          <exon e_start="118833" e_stop="118696"/>
          <exon e_start="118415" e_stop="118278"/>
          <exon e_start="118168" e_stop="118107"/>
          <exon e_start="118027" e_stop="117468"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGAACAATTTTGAATGCTCTCTCTTTATGTAAACATTATGCTTTGTATGAAATAAAGGTCCTCTAAGATTTCTGTAAGCAACTTTGAAAATTTCTGTAAGTTCTTCTTTATTTAAATTCCGCAACTATGAAAATGGTAAGGAAAGAGTATGATTGTAGCTTCTCTTGTTCACTGATGACATGACAGTGTGAATAATTTTGATCAACTATGATTTAATCAGTTAAAAGTAATCTATTTATCTTATTTTTGAAATGACTAGTTTGGCTTTAGATGGTACTATAAAGTAGACCTCATTATTTTAGGTTACGCAGAGTGTTTACTTGATTGTCTAAACAAAATTTAGAAATAAATTTTGAACCTAAGCTAAACACAGAGTTAAAGGGTTTCATTTAATCATTAAATTTGTCCTCCGTTATAGTTCTTTTAAGGGAAAGCTCCGAATCAACCCATTTTATCCAAAAATGAAAAGATAAAACCACCCGCCCCTAATATAACCCGCATCCGACCAACTAACATGTAAAACCCACCCAAGTCCAAAGAAAGCAAAACTAACCCTTTAACGGCGGCGGCGGCGGCAGCGACGGCGCAACTTTTTTCCATGAGTTGATTTCCAAGAAAATGGAAATAACTTTGCCCGCATTGGATCTAACTAACAACTTATTGTTCTACCCAAGTCCAAGAAATCAAAAACAAACCCATATAATGGTAGCGTGGCGGCGGCGCGTCTTCTTCAATGGTTTCCAGGAGAAGGGGAAATAACTTTACCCACATCCGACCCAACTAACAAGTAAACCATCTTTCCCGTTATAGTTCTACCCAGGTCCAAGAAGGCAAATACAAACCCCTCTGGGCGTGGCAGCGGCGCATCTTCTTCCATGTCTTCCAAGAAAAGGGAAAATAACTTTGCCTTTTCCCATCTTCTACAGTTCCCTTAATTTTGCATTTTTTTAGAATCTAACTCAACAGTCCCTTTATGGACTTCATCACTTCTAACCAAACACAAATCCAACTAAGAAGAGATAAAACTCAATAAAATGAATAGCGTCCCAGAGGAAAATCTCAACACCTGAGTAGACATAAAAAAGAATCAACTTAGCAGTTAAATAAAATATCACATCATCAACAGCAGAAGTTGCCGCCTGAATCGCCACGAACCCAACCACAAAAGCAGAGACAAATTTCCCTTGCTGAAAGAATCAGCCCAAATCCACTACATTCTTGTACTGCAATTCCAATTACACTTGCCTCGAAATTGCCGCAAATACAGTAACTTGGTGACTTTTGAGGAAGATGGAAAAATTGATTCTTTTCTATTGGGTGGACAAACTCACCAAGAGTAATTAAAAATAAATATGGTCTGTTTTGAGGTTGAAGTTTAATTCAGGTGACATAGTACTTTGCTGGGTTTTGAGGAAACTGGAACAGTATTTGTTTTTTAATCATAATGTTGAGTTTATTTAATTTGGTTCGGATTTTAATTTGATGGGTTTGCGGTCGGATTCATTCTAACCAATAAAAGAATGTTGATGGTTATTTTATCTCCAATAACTATATTGCAAGTACTTGTAAACCAAAAATACATTCACAGATTATAATTAAAGTAGTCTTTTTCTAATCAGAAGAATTATTTTCACCCGTGTTTTCTTTCTTTGGTATCTTGATGATTGAACAAGCTAACTGTGTCTTGATATTACCCCACTTGATTTGTTTGATATTTTAACTGATTTTCTTGAGAAAGGAGCTAGCTAATTATAGGTTCTGCAATTTCAATCTACAGTTAGGTACTCCAACTACTGGAGAAAGGGTATCAGAAGGTTTTGTAGCAGTGCCGTGGTGCATGAAGAGCCAATCACTCCACCTGTTGAGGTTAAATATAATCAGCTTCTCATTAATGGACAGTTTGTTGATGCAGCCTCAGGTTGACCTAAAGTCTTTTCATTTATATGTTATTTCTTCTATAAATCTCAAGTGTAATATGGAGAATTCTACGTCTTCAGGGAAGACATTTCCTACATTTGACCCTCGAACAGGCGAAGCTATTACTACGGTTGCGGAGGCCGACACTGAAGATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAAGGACCATGGCCTAAAATGACTTGTGCAGTAACCGAACTTTCTTATCTTTCCATATCCTCTTCCTTGTCCCAACAGTGAGAGGCGGATTTAGAATTTGAACTTAACATGTTCAACCTTTAAGGTTCTTATCGCTGAACACATTGATCTATCGGACATACGTGTTTAGATTTTAATATTCTCTCATTTTAGTACTTTCACATATATATTTATTTCCTGTATTATATGGTCCCTCTACCGAAGTTAATTTCTCAGTTGGTCGTTCAACTAATAGTAATTATTTGAGTAATATAAGTCACTTTCTTTGTTGAAGAAAATTGGAATCAAGTTGAAAAATGACTTCTTGAGATAATAACTATTTAGCAAAGTGACCATATGAGAAATCAATCCGCCTCTGCAGACAACTACAGCTTGTTTAAACTCCCAGTCTTACTTAAGCATGTACAATAATGTACTTACTTAACCAAATATTTCCAGGAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGTTAAGAAAATAAGAAAAATGGCGTTATGTTTCCTTTTGACAGTTTAATAACCACTTATTGTATATCAATTGACGTTCTAATGTTTGCTGAATCACCCTAAATGCTTTTCTAAGTATTTCTGCTTACATTTCTTATTCAGGTTGGGCTGATAAAATTCATGGTCTTACAGCTCCTGCTGACAGTTTGCACCATGTTCAGACCCTGCATGAGCCAATTGGTGTTGCAGGACAGATAATACCCTGGAATTTTCCGTTATTAATGTTCGCCTGGAAAGTTGGCCCTGCACTTGCTTGTGGTAACACTGTCGTACTAAAACCAGCAGAACAAACACCACTCTCTGCCCTGTATGTGTCAAAGTTATTCCATGAGGTATATAACCATTTTTAGTCTGCACCGGTCGTGAATTCACAGAATTCTAATGAGTACTCATTTGTACTTGTCATTTAGTTATTTCTAGTATGTTGTTTACAAATTTAGTAGTTTCAAATATAGAAGTGGAAACTTTCCACAATTATTGCAGCTCAAATCGAAGATTTCTCCATCTATACAAGATGATAGAATGTAATTTGTCTTCACTCCAACTGTCAGGTTGGACTTCCCCCTGGAGTCTTAAATGTCATTCCTGGATCCGGTAGTGCAGGTGCAGATCTTGCCAGTCATATGGATGTCGATAAGGTATTTTCTGAGTTTTGGCTTTAGTTCCTGAATAGGAATTTACAGAAGAAATGGCTTATGTTTCTTCTGATAAACCTACACGACAAAGTCCAAGGCAGTTTCAGTATCAAATTTGAAATGTTGGATTGTATAAAGGAGTGTCAGAACACGGTATTTCAGTTTCAACATATCTCTAGGTAGCAATGAAGCTATCCGTCGCTAATTCTACCCCCTCTTCCATCCCAAAGAAGATTAAAAGAAGTAAATAGCCTAATTATAGTGTCTCATTAGATAGTATAATCCACATGTAGAAAATGAAGAAAATCATATCTTTTTCTTCCAGCTTCCCCATTAAAAGTCAATAAACAACATAAAGAGGTTATGCATCCTGATGTCCTTTCAGCTTTTGTATTTCATGCTTGCTTTTATTGATGCAGCTGTGATGTGTAAAGTTTTCTGAGTGAATACTCTGGAATAGATGAGGGAGACTGAAGGAGCACTGACATCTTCTACTACTTGTTTTCGTATAGATTTAAACAGCTTGGTCCTCGACATTACTTGCATCTTTTCCCCCTGTAAAATGTTTTTTTTTGGTGATTTTTTAATTTTTCTGTGATGTCTAAATTGCGATGTGTCTCTACATCACTCCTTTTGGTGTCTACAGATTGCTTTTACAGGGTCCACAGAAACTGGTAAAGCTGTCGTAGGTGCAGCTGCAAAGAGCAACCTAAAACCTGTGACATTGGAGCTCGGAGGAAAATCTCCTTTCATCATTTGTGAAGATGCAGACGTTGATAAAGCTGTTGAGTTGGCTCATTCTGCTGTTTTCTTTAACCAGGTAGCAAAAATTTCCACTCTTGGAAAATTGCAACCTCTGATGCTTGCTCCAGAATGGAATAAATTTCAAGTATCTGCAGGGACAATGCTGCTGTGCTGGATCTCGGACATTCGTACATGAAAGAGTATATGATGAATTTGTGGAGAAAGCCAAAGCTCGTGCTTTAAAACGCATTGTTGGAGACCCTTTCAAGAAGGGAGTTGAACAAGGTCCGCAGGTACTGTTTTTTCGTGTATCGCTGTCCCCTCTGTCATGGATAATATATAAAAAGAGAATAGTTAAACAAATTCTTTGCCAACTTAAGGACAAGAAGGAATAATATATGTTCACCAATTTGGATGTAGCCAACTTTTCAGGCAATGGTACCTTTATTATTTCCTTTTCAGCATCTTACACAAACTTAAATCATGAATTTCCAGCAAAGAGAAGTAGTAATTACGGACTTCCATTTACATTTCTGAAGTAGTTGTAACATGAATGTTTTGTGTTATCAATAGATTGATACAGAGCAATTTGAGAAGATCCTGAAGTACATAAAATCTGGTACTGAAAGCGGGGCTACTCTCGAGTCTGGAGGGGAAAAATTGGGTTCCAAGGGCTTCTATGTCCAACCTACTGTCTTCTCAAATGTCCAGGTATAACTGCCATTGTCCATAGAATATATCCATACGTAAGGTGAAAAAGATGAGCATCGTACTGATGACATTTAATTGTTTTGTTTAAAATTATTTTTCAACTATTTAGGATAACATGCTGATTGCCAGAGATGAGATATTTGGACCAGTGCAGTCCCTCTTGAAATTCAAGTGAGATTACATTTCATTTGTATTGTATCTGTGCTTGTATTTTGTTTATTAACACTGAACCTGACCTTGAAACAAACAGGGATGTTGAAGAGGTCATCCGAAGGGCAAACTCGTCACATTATGGGTTGGCAGCGGGTGTTTTTACCCAGAATATAGATGCAGCCAACACAATATCTCGAGCCCTTAGAGTAGGGACAGTGTGGGTTAACTGCTTTAACATCTTTGATGCTGCCATTCCGTTTGGTGGTTATAAGATGAGTGGACATGGAAGAGAGAAGGGAGTCTACAGCCTAAGTAACTACTTGCAAGTCAAAGCTATTGTTACCCCTCTGAAGAATCCAGCATGGCTGTAGTTTTCCCCCCTGCTTTCTGGTACTCCTGAGATGTCGTGCAACACGGCAATCTTGTCTTTTAGAGGTCACTTGTATACAGTGTAGATAAGACCAAAACGCTGTATTGTGTGTGTGTTATTGTTTGTTACTAACTTCTTATGATTTGATAACAATATGCAAACTTGTTTGTGTGAGACCTTTCTTGATTTCTGTAGCTCTGATGCAAAATAGGATCTTGTGTTTGAGTTTTGTGGGAATGTAATGAATTATATATAGATGTAATGTTATAATTCTATATTACTACGGT</genome_strand>
        <mrna_strand>CGGTTCAATTTTGAATGCTCTCTCTTTATGTAAACATTATGCTTTGTATGAAATAAAGGTCCTCTAAGATTTCTGTAAGCAACTTTGAAAATTTCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGGTACTCCAACTACTGGAGAAAGGGTATCAGAAGGTTTTGTAGCAGTGCCGTGGTGCATGAAGAGCCAATCACTCCACCTGTTGAGGTTAAATATAATCAGCTTCTCATTAATGGACAGTTTGTTGATGCAGCCTCAG...............................................................................GGAAGACATTTCCTACATTTGACCCTCGAACAGGCGAAGCTATTACTACGGTTGCGGAGGCCGACACTGAAGATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAAGGACCATGGCCTAAAATGACTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGTTAAGAAAATAAGAAAAATGGCGTTATGTTTCCTTTTGACAGTTTAATAACCACTTATTGTATATCAATTGACGTTCTAATGTTTGCTGAATCACCCTAAATGCTTTTCTAAGTATTTCTGCTTACATTTCTTATTCAGGTTGGGCTGATAAAATTCATGGTCTTACAGCTCCTGCTGACAGTTTGCACCATGTTCAGACCCTGCATGAGCCAATTGGTGTTGCAGGACAGATAATACCCTGGAATTTTCCGTTATTAATGTTCGCCTGGAAAGTTGGCCCTGCACTTGCTTGTGGTAACACTGTCGTACTAAAACCAGCAGAACAAACACCACTCTCTGCCCTGTATGTGTCAAAGTTATTCCATGAG...........................................................................................................................................................................................................................GTTGGACTTCCCCCTGGAGTCTTAAATGTCATTCCTGGATCCGGTAGTGCAGGTGCAGATCTTGCCAGTCATATGGATGTCGATAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCTTTTACAGGGTCCACAGAAACTGGTAAAGCTGTCGTAGGTGCAGCTGCAAAGAGCAACCTAAAACCTGTGACATTGGAGCTCGGAGGAAAATCTCCTTTCATCATTTGTGAAGATGCAGACGTTGATAAAGCTGTTGAGTTGGCTCATTCTGCTGTTTTCTTTAACCAG...............................................................................GGACAATGCTGCTGTGCTGGATCTCGGACATTCGTACATGAAAGAGTATATGATGAATTTGTGGAGAAAGCCAAAGCTCGTGCTTTAAAACGCATTGTTGGAGACCCTTTCAAGAAGGGAGTTGAACAAGGTCCGCAG........................................................................................................................................................................................................................................................................................ATTGATACAGAGCAATTTGAGAAGATCCTGAAGTACATAAAATCTGGTACTGAAAGCGGGGCTACTCTCGAGTCTGGAGGGGAAAAATTGGGTTCCAAGGGCTTCTATGTCCAACCTACTGTCTTCTCAAATGTCCAG.............................................................................................................GATAACATGCTGATTGCCAGAGATGAGATATTTGGACCAGTGCAGTCCCTCTTGAAATTCAA...............................................................................GGATGTTGAAGAGGTCATCCGAAGGGCAAACTCGTCACATTATGGGTTGGCAGCGGGTGTTTTTACCCAGAATATAGATGCAGCCAACACAATATCTCGAGCCCTTAGAGTAGGGACAGTGTGGGTTAACTGCTTTAACATCTTTGATGCTGCCATTCCGTTTGGTGGTTATAAGATGAGTGGACATGGAAGAGAGAAGGGAGTCTACAGCCTAAGTAACTACTTGCAAGTCAAAGCTATTGTTACCCCTCTGAAGAATCCAGCATGGCTGTAGTTTTCCCCCCTGCTTTCTGGTACTCCTGAGATGTCGTGCAACACGGCAATCTTGTCTTTTAGAGGTCACTTGTATACAGTGTAGATAAGACCAAAACGCTGTATTGTGTGTGTGTTATTGTTTGTTACTAACTTCTTATGATTTGATAACAATATGCAAACTTGTTTGTGTGAGACCTTTCTTGATTTCTGTAGCTCTGATGCAAAATAGGATCTTGTGTTTGAGTTTTGTGGGAATGTAATGAATTATATATAGATGTAATGTTATAATTCTATATTACTACGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U584013" ref_strand="+" ref_description="SGN-U584013 Tomato 200607#2 [5 ESTs aligned] (*GB) gi|29373073|gb|AAO72532.1| (e_value=4e-58) aldehyde dehydrogenase 1 precursor [Lotus corniculatus]; (*ATH) AT3G48000.1 (e_value=2e-57)  Symbol: None | aldehyde dehydrogenase (ALDH2), identical to aldehyde dehydrogenase (Arabidopsis thaliana) GI:8574427; similar to mitochondrial aldehyde dehydrogenase (Arabidopsis thaliana) gi:19850249:gb:AAL99612; identical to cDNA aldehyde dehydrog... ; (*SWP) sp|Q9SU63|AL2B4_ARATH (e_value=2e-56) Aldehyde dehydrogenase family 2 member B4, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B4; ">
      <seq>ggtcttttaacacgcttgaaacccccacaaggtccaagggagtttcagtatcaaatttgaaatgttggattgtataaaggagtgtcagaacacggtatttcagtttcaacatatctctaggtagcaatgaagctatccgtcgctaattctaccccctcttccatcccaaagaagattaaaagaagtaaatagcctaattatagtgtctcattagatagtataatccacatgtagaaaatgaagaaaatcatatctttttcttccagcttccccattaaaagtcaataaacaacataaagaggttatgcatcctgatgtcctttcagcttttgtatttcatgcttgcttttattgatgcagctgtgatgtgtaaagttttctgagtgaatactctggaatagatgagggagactgaaggagcactgacatcttctactacttgttttcgtatagatttaaacagcttggtcctcgacattacttgcatcttttccccctgtaaaatgtttttttttggtgattttttaatttttctgtgatgtctaaattgcgatgtgtctctacatcactccttttggtgtctacagattgcttttacagggtccacagaaactggtaaagctgtcgtaggtgcagctgcaaagagcaacctaaaacctgtgacattggagctcggaggaaaatctcctttcatcatttgtgaagatgcagacgttgataaagctgttgagttggctcattctgctgttttctttaaccagggacaatgctgctgtgctggatctcggacattcgtacatgaaagagtatatgatgaatttgtggagaaagccaaagctcgtgctttaaaacgcattgttggagaccctttcaagaagggagttgaacaaggtccgcagattgatacagagcaatttgagaagatcctgaagtacataaaatctggtactgaaagcgggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E02.1" temp_strand="-" temp_description="C02HBa0236E02.1  AC215430.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E02 sequenced_by:kribb upload_account_name:korea">
        <position start="119951" stop="118055"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="119641" g_stop="118913" g_length="729"/>
          <reference_exon_boundary r_type="cDNA" r_start="33" r_stop="761" r_length="729" r_score="0.999"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="118912" i_stop="118834" i_length="79">
            <donor d_prob="0.933" d_score="1.00"/>
            <acceptor a_prob="0.857" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="118833" g_stop="118696" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="762" r_stop="899" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="118695" i_stop="118416" i_length="280">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="118415" g_stop="118355" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="900" r_stop="960" r_length="61" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E02.1" gen_strand="-" ref_id="SGN-U584013" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>928</cumulative_length_of_scored_exons>
        <coverage percentage="0.967" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U584013" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="119641" e_stop="118913"/>
          <exon e_start="118833" e_stop="118696"/>
          <exon e_start="118415" e_stop="118355"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCAAGGCAGTTTCAGTATCAAATTTGAAATGTTGGATTGTATAAAGGAGTGTCAGAACACGGTATTTCAGTTTCAACATATCTCTAGGTAGCAATGAAGCTATCCGTCGCTAATTCTACCCCCTCTTCCATCCCAAAGAAGATTAAAAGAAGTAAATAGCCTAATTATAGTGTCTCATTAGATAGTATAATCCACATGTAGAAAATGAAGAAAATCATATCTTTTTCTTCCAGCTTCCCCATTAAAAGTCAATAAACAACATAAAGAGGTTATGCATCCTGATGTCCTTTCAGCTTTTGTATTTCATGCTTGCTTTTATTGATGCAGCTGTGATGTGTAAAGTTTTCTGAGTGAATACTCTGGAATAGATGAGGGAGACTGAAGGAGCACTGACATCTTCTACTACTTGTTTTCGTATAGATTTAAACAGCTTGGTCCTCGACATTACTTGCATCTTTTCCCCCTGTAAAATGTTTTTTTTTGGTGATTTTTTAATTTTTCTGTGATGTCTAAATTGCGATGTGTCTCTACATCACTCCTTTTGGTGTCTACAGATTGCTTTTACAGGGTCCACAGAAACTGGTAAAGCTGTCGTAGGTGCAGCTGCAAAGAGCAACCTAAAACCTGTGACATTGGAGCTCGGAGGAAAATCTCCTTTCATCATTTGTGAAGATGCAGACGTTGATAAAGCTGTTGAGTTGGCTCATTCTGCTGTTTTCTTTAACCAGGTAGCAAAAATTTCCACTCTTGGAAAATTGCAACCTCTGATGCTTGCTCCAGAATGGAATAAATTTCAAGTATCTGCAGGGACAATGCTGCTGTGCTGGATCTCGGACATTCGTACATGAAAGAGTATATGATGAATTTGTGGAGAAAGCCAAAGCTCGTGCTTTAAAACGCATTGTTGGAGACCCTTTCAAGAAGGGAGTTGAACAAGGTCCGCAGGTACTGTTTTTTCGTGTATCGCTGTCCCCTCTGTCATGGATAATATATAAAAAGAGAATAGTTAAACAAATTCTTTGCCAACTTAAGGACAAGAAGGAATAATATATGTTCACCAATTTGGATGTAGCCAACTTTTCAGGCAATGGTACCTTTATTATTTCCTTTTCAGCATCTTACACAAACTTAAATCATGAATTTCCAGCAAAGAGAAGTAGTAATTACGGACTTCCATTTACATTTCTGAAGTAGTTGTAACATGAATGTTTTGTGTTATCAATAGATTGATACAGAGCAATTTGAGAAGATCCTGAAGTACATAAAATCTGGTACTGAAAGCGGGG</genome_strand>
        <mrna_strand>TCCAAGGGAGTTTCAGTATCAAATTTGAAATGTTGGATTGTATAAAGGAGTGTCAGAACACGGTATTTCAGTTTCAACATATCTCTAGGTAGCAATGAAGCTATCCGTCGCTAATTCTACCCCCTCTTCCATCCCAAAGAAGATTAAAAGAAGTAAATAGCCTAATTATAGTGTCTCATTAGATAGTATAATCCACATGTAGAAAATGAAGAAAATCATATCTTTTTCTTCCAGCTTCCCCATTAAAAGTCAATAAACAACATAAAGAGGTTATGCATCCTGATGTCCTTTCAGCTTTTGTATTTCATGCTTGCTTTTATTGATGCAGCTGTGATGTGTAAAGTTTTCTGAGTGAATACTCTGGAATAGATGAGGGAGACTGAAGGAGCACTGACATCTTCTACTACTTGTTTTCGTATAGATTTAAACAGCTTGGTCCTCGACATTACTTGCATCTTTTCCCCCTGTAAAATGTTTTTTTTTGGTGATTTTTTAATTTTTCTGTGATGTCTAAATTGCGATGTGTCTCTACATCACTCCTTTTGGTGTCTACAGATTGCTTTTACAGGGTCCACAGAAACTGGTAAAGCTGTCGTAGGTGCAGCTGCAAAGAGCAACCTAAAACCTGTGACATTGGAGCTCGGAGGAAAATCTCCTTTCATCATTTGTGAAGATGCAGACGTTGATAAAGCTGTTGAGTTGGCTCATTCTGCTGTTTTCTTTAACCAG...............................................................................GGACAATGCTGCTGTGCTGGATCTCGGACATTCGTACATGAAAGAGTATATGATGAATTTGTGGAGAAAGCCAAAGCTCGTGCTTTAAAACGCATTGTTGGAGACCCTTTCAAGAAGGGAGTTGAACAAGGTCCGCAG........................................................................................................................................................................................................................................................................................ATTGATACAGAGCAATTTGAGAAGATCCTGAAGTACATAAAATCTGGTACTGAAAGCGGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U584018" ref_strand="+" ref_description="SGN-U584018 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|116786856|gb|ABK24267.1| (e_value=3e-68) unknown; (*ATH) AT3G48000.1 (e_value=3e-64)  Symbol: None | aldehyde dehydrogenase (ALDH2), identical to aldehyde dehydrogenase (Arabidopsis thaliana) GI:8574427; similar to mitochondrial aldehyde dehydrogenase (Arabidopsis thaliana) gi:19850249:gb:AAL99612; identical to cDNA aldehyde dehydrog... ; (*SWP) sp|Q9SU63|AL2B4_ARATH (e_value=3e-63) Aldehyde dehydrogenase family 2 member B4, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B4; ">
      <seq>ggaaaggtcatgtataatgttgcagtttgctgatttgcttgagaggcacgagtgatgaacttgcagcacttgagacttgggataagggaaagccttacgaacaagctgcaaatgaagaaataccaatgctcattcgtcttttcagatactatgctggttaagaaaataagaaaaatggcgttgggctgataaaattcatggtcttacagctcctgctgacagtttgcaccatgttcagaccctgcatgagccaattggtgttgcaggacagataataccctggaattttccgttattaatgttcgcctggaaagttggccctgcacttgcttgtggtaacactgtcgtactaaaaccagcagaacaaacaccactctctgccctgtatgtgtcaaagttattccatgaggttggacttccccctggagtcttaaatgtcattcctggatccggtagtgcaggtgcagatcttgccagtcatatggatgtcgataagattgcttttacagggtccacagaaactggtaaagctgtcgtatgtgcagctgcaaagagcaacctaaaacctgtgacattggagctcggaggaaaatctcctttcatcatttgtga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E02.1" temp_strand="-" temp_description="C02HBa0236E02.1  AC215430.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E02 sequenced_by:kribb upload_account_name:korea">
        <position start="120860" stop="118671"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="120560" g_stop="120383" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="179" r_length="179" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="120382" i_stop="120266" i_length="117">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="120265" g_stop="120036" g_length="230"/>
          <reference_exon_boundary r_type="cDNA" r_start="180" r_stop="409" r_length="230" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="120035" i_stop="119817" i_length="219">
            <donor d_prob="0.959" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="119816" g_stop="119730" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="410" r_stop="496" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="119729" i_stop="119087" i_length="643">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="119086" g_stop="118971" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="497" r_stop="612" r_length="116" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E02.1" gen_strand="-" ref_id="SGN-U584018" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>611</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U584018" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="120560" e_stop="120383"/>
          <exon e_start="120265" e_stop="120036"/>
          <exon e_start="119816" e_stop="119730"/>
          <exon e_start="119086" e_stop="118971"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCAC-AGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGTTAAGAAAATAAGAAAAATGGCGTTATGTTTCCTTTTGACAGTTTAATAACCACTTATTGTATATCAATTGACGTTCTAATGTTTGCTGAATCACCCTAAATGCTTTTCTAAGTATTTCTGCTTACATTTCTTATTCAGGTTGGGCTGATAAAATTCATGGTCTTACAGCTCCTGCTGACAGTTTGCACCATGTTCAGACCCTGCATGAGCCAATTGGTGTTGCAGGACAGATAATACCCTGGAATTTTCCGTTATTAATGTTCGCCTGGAAAGTTGGCCCTGCACTTGCTTGTGGTAACACTGTCGTACTAAAACCAGCAGAACAAACACCACTCTCTGCCCTGTATGTGTCAAAGTTATTCCATGAGGTATATAACCATTTTTAGTCTGCACCGGTCGTGAATTCACAGAATTCTAATGAGTACTCATTTGTACTTGTCATTTAGTTATTTCTAGTATGTTGTTTACAAATTTAGTAGTTTCAAATATAGAAGTGGAAACTTTCCACAATTATTGCAGCTCAAATCGAAGATTTCTCCATCTATACAAGATGATAGAATGTAATTTGTCTTCACTCCAACTGTCAGGTTGGACTTCCCCCTGGAGTCTTAAATGTCATTCCTGGATCCGGTAGTGCAGGTGCAGATCTTGCCAGTCATATGGATGTCGATAAGGTATTTTCTGAGTTTTGGCTTTAGTTCCTGAATAGGAATTTACAGAAGAAATGGCTTATGTTTCTTCTGATAAACCTACACGACAAAGTCCAAGGCAGTTTCAGTATCAAATTTGAAATGTTGGATTGTATAAAGGAGTGTCAGAACACGGTATTTCAGTTTCAACATATCTCTAGGTAGCAATGAAGCTATCCGTCGCTAATTCTACCCCCTCTTCCATCCCAAAGAAGATTAAAAGAAGTAAATAGCCTAATTATAGTGTCTCATTAGATAGTATAATCCACATGTAGAAAATGAAGAAAATCATATCTTTTTCTTCCAGCTTCCCCATTAAAAGTCAATAAACAACATAAAGAGGTTATGCATCCTGATGTCCTTTCAGCTTTTGTATTTCATGCTTGCTTTTATTGATGCAGCTGTGATGTGTAAAGTTTTCTGAGTGAATACTCTGGAATAGATGAGGGAGACTGAAGGAGCACTGACATCTTCTACTACTTGTTTTCGTATAGATTTAAACAGCTTGGTCCTCGACATTACTTGCATCTTTTCCCCCTGTAAAATGTTTTTTTTTGGTGATTTTTTAATTTTTCTGTGATGTCTAAATTGCGATGTGTCTCTACATCACTCCTTTTGGTGTCTACAGATTGCTTTTACAGGGTCCACAGAAACTGGTAAAGCTGTCGTAGGTGCAGCTGCAAAGAGCAACCTAAAACCTGTGACATTGGAGCTCGGAGGAAAATCTCCTTTCATCATTTGTGA</genome_strand>
        <mrna_strand>GGAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACGAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGTTAAGAAAATAAGAAAAATGGC.....................................................................................................................GTTGGGCTGATAAAATTCATGGTCTTACAGCTCCTGCTGACAGTTTGCACCATGTTCAGACCCTGCATGAGCCAATTGGTGTTGCAGGACAGATAATACCCTGGAATTTTCCGTTATTAATGTTCGCCTGGAAAGTTGGCCCTGCACTTGCTTGTGGTAACACTGTCGTACTAAAACCAGCAGAACAAACACCACTCTCTGCCCTGTATGTGTCAAAGTTATTCCATGAG...........................................................................................................................................................................................................................GTTGGACTTCCCCCTGGAGTCTTAAATGTCATTCCTGGATCCGGTAGTGCAGGTGCAGATCTTGCCAGTCATATGGATGTCGATAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCTTTTACAGGGTCCACAGAAACTGGTAAAGCTGTCGTATGTGCAGCTGCAAAGAGCAACCTAAAACCTGTGACATTGGAGCTCGGAGGAAAATCTCCTTTCATCATTTGTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U584014" ref_strand="+" ref_description="SGN-U584014 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|157345500|emb|CAO14798.1| (e_value=2e-109) unnamed; (*ATH) AT1G23800.1 (e_value=7e-103)  Symbol: None | aldehyde dehydrogenase, mitochondrial (ALDH3), nearly identical to mitochondrial aldehyde dehydrogenase ALDH3 (Arabidopsis thaliana) gi:19850249:gb:AAL99612; contains Pfam profile PF00171: aldehyde dehydrogenase (NAD) family protein |... ; (*SWP) sp|Q8S528|AL2B7_ARATH (e_value=6e-102) Aldehyde dehydrogenase family 2 member B7, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B7; ">
      <seq>gacattatgctttgtatgaaataaaggtcctctaagatttctgtaagcaactttgaaaatttctttaggtactccaactactggagaaagggtatcagaaggttttgtagcagtgccgtggtgcatgaagagccaatcactccacctgttgaggttaaatataatcagcttctcattaatggacagtttgttgatgcagcctcagggaagacatttcctacatttgaccctcgaacaggcgaagctattactacggttgcggaggccgacactgaagatgtcaaccgtgcagtctttgctgcccgtaaagcatttgatgaaggaccatggcctaaaatgacttgtgcagaaaggtcatgtataatgttgcagtttgctgatttgcttgagaggcacagtgatgaacttgcagcacttgagacttgggataagggaaagccttacgaacaagctgcaaatgaagaaataccaatgctcattcgtcttttcagatactatgctggttgggctgataaaattcatggtcttacagctcctgctgacagtttgcaccatgttcagaccctgcatgagccaattggtgttgcaggacagataataccctggaattttccgttattaatgttcgcctggaaagttggccctgcacttgcttgtggtaacactgtcgtactaaaaccagcagaacaaacaccactctctgccctgtatgtgtcaaagttattccatgaggttggacttccccctggagtcttaaatgtcattcctggatccggtagtgcaggtgcagatcttgccagtcatatggatgtcgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E02.1" temp_strand="-" temp_description="C02HBa0236E02.1  AC215430.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E02 sequenced_by:kribb upload_account_name:korea">
        <position start="123414" stop="119433"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="123115" g_stop="123052" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="64" r_length="64" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="123051" i_stop="121370" i_length="1682">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.901" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="121369" g_stop="121229" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="65" r_stop="205" r_length="141" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="121228" i_stop="121150" i_length="79">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.750" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="121149" g_stop="121007" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="206" r_stop="348" r_length="143" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="121006" i_stop="120560" i_length="447">
            <donor d_prob="0.793" d_score="1.00"/>
            <acceptor a_prob="0.922" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="120559" g_stop="120406" g_length="154"/>
          <reference_exon_boundary r_type="cDNA" r_start="349" r_stop="502" r_length="154" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="120405" i_stop="120266" i_length="140">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="120265" g_stop="120036" g_length="230"/>
          <reference_exon_boundary r_type="cDNA" r_start="503" r_stop="732" r_length="230" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="120035" i_stop="119817" i_length="219">
            <donor d_prob="0.959" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="119816" g_stop="119733" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="733" r_stop="816" r_length="84" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E02.1" gen_strand="-" ref_id="SGN-U584014" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>816</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U584014" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="123115" e_stop="123052"/>
          <exon e_start="121369" e_stop="121229"/>
          <exon e_start="121149" e_stop="121007"/>
          <exon e_start="120559" e_stop="120406"/>
          <exon e_start="120265" e_stop="120036"/>
          <exon e_start="119816" e_stop="119733"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACATTATGCTTTGTATGAAATAAAGGTCCTCTAAGATTTCTGTAAGCAACTTTGAAAATTTCTGTAAGTTCTTCTTTATTTAAATTCCGCAACTATGAAAATGGTAAGGAAAGAGTATGATTGTAGCTTCTCTTGTTCACTGATGACATGACAGTGTGAATAATTTTGATCAACTATGATTTAATCAGTTAAAAGTAATCTATTTATCTTATTTTTGAAATGACTAGTTTGGCTTTAGATGGTACTATAAAGTAGACCTCATTATTTTAGGTTACGCAGAGTGTTTACTTGATTGTCTAAACAAAATTTAGAAATAAATTTTGAACCTAAGCTAAACACAGAGTTAAAGGGTTTCATTTAATCATTAAATTTGTCCTCCGTTATAGTTCTTTTAAGGGAAAGCTCCGAATCAACCCATTTTATCCAAAAATGAAAAGATAAAACCACCCGCCCCTAATATAACCCGCATCCGACCAACTAACATGTAAAACCCACCCAAGTCCAAAGAAAGCAAAACTAACCCTTTAACGGCGGCGGCGGCGGCAGCGACGGCGCAACTTTTTTCCATGAGTTGATTTCCAAGAAAATGGAAATAACTTTGCCCGCATTGGATCTAACTAACAACTTATTGTTCTACCCAAGTCCAAGAAATCAAAAACAAACCCATATAATGGTAGCGTGGCGGCGGCGCGTCTTCTTCAATGGTTTCCAGGAGAAGGGGAAATAACTTTACCCACATCCGACCCAACTAACAAGTAAACCATCTTTCCCGTTATAGTTCTACCCAGGTCCAAGAAGGCAAATACAAACCCCTCTGGGCGTGGCAGCGGCGCATCTTCTTCCATGTCTTCCAAGAAAAGGGAAAATAACTTTGCCTTTTCCCATCTTCTACAGTTCCCTTAATTTTGCATTTTTTTAGAATCTAACTCAACAGTCCCTTTATGGACTTCATCACTTCTAACCAAACACAAATCCAACTAAGAAGAGATAAAACTCAATAAAATGAATAGCGTCCCAGAGGAAAATCTCAACACCTGAGTAGACATAAAAAAGAATCAACTTAGCAGTTAAATAAAATATCACATCATCAACAGCAGAAGTTGCCGCCTGAATCGCCACGAACCCAACCACAAAAGCAGAGACAAATTTCCCTTGCTGAAAGAATCAGCCCAAATCCACTACATTCTTGTACTGCAATTCCAATTACACTTGCCTCGAAATTGCCGCAAATACAGTAACTTGGTGACTTTTGAGGAAGATGGAAAAATTGATTCTTTTCTATTGGGTGGACAAACTCACCAAGAGTAATTAAAAATAAATATGGTCTGTTTTGAGGTTGAAGTTTAATTCAGGTGACATAGTACTTTGCTGGGTTTTGAGGAAACTGGAACAGTATTTGTTTTTTAATCATAATGTTGAGTTTATTTAATTTGGTTCGGATTTTAATTTGATGGGTTTGCGGTCGGATTCATTCTAACCAATAAAAGAATGTTGATGGTTATTTTATCTCCAATAACTATATTGCAAGTACTTGTAAACCAAAAATACATTCACAGATTATAATTAAAGTAGTCTTTTTCTAATCAGAAGAATTATTTTCACCCGTGTTTTCTTTCTTTGGTATCTTGATGATTGAACAAGCTAACTGTGTCTTGATATTACCCCACTTGATTTGTTTGATATTTTAACTGATTTTCTTGAGAAAGGAGCTAGCTAATTATAGGTTCTGCAATTTCAATCTACAGTTAGGTACTCCAACTACTGGAGAAAGGGTATCAGAAGGTTTTGTAGCAGTGCCGTGGTGCATGAAGAGCCAATCACTCCACCTGTTGAGGTTAAATATAATCAGCTTCTCATTAATGGACAGTTTGTTGATGCAGCCTCAGGTTGACCTAAAGTCTTTTCATTTATATGTTATTTCTTCTATAAATCTCAAGTGTAATATGGAGAATTCTACGTCTTCAGGGAAGACATTTCCTACATTTGACCCTCGAACAGGCGAAGCTATTACTACGGTTGCGGAGGCCGACACTGAAGATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAAGGACCATGGCCTAAAATGACTTGTGCAGTAACCGAACTTTCTTATCTTTCCATATCCTCTTCCTTGTCCCAACAGTGAGAGGCGGATTTAGAATTTGAACTTAACATGTTCAACCTTTAAGGTTCTTATCGCTGAACACATTGATCTATCGGACATACGTGTTTAGATTTTAATATTCTCTCATTTTAGTACTTTCACATATATATTTATTTCCTGTATTATATGGTCCCTCTACCGAAGTTAATTTCTCAGTTGGTCGTTCAACTAATAGTAATTATTTGAGTAATATAAGTCACTTTCTTTGTTGAAGAAAATTGGAATCAAGTTGAAAAATGACTTCTTGAGATAATAACTATTTAGCAAAGTGACCATATGAGAAATCAATCCGCCTCTGCAGACAACTACAGCTTGTTTAAACTCCCAGTCTTACTTAAGCATGTACAATAATGTACTTACTTAACCAAATATTTCCAGGAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGTTAAGAAAATAAGAAAAATGGCGTTATGTTTCCTTTTGACAGTTTAATAACCACTTATTGTATATCAATTGACGTTCTAATGTTTGCTGAATCACCCTAAATGCTTTTCTAAGTATTTCTGCTTACATTTCTTATTCAGGTTGGGCTGATAAAATTCATGGTCTTACAGCTCCTGCTGACAGTTTGCACCATGTTCAGACCCTGCATGAGCCAATTGGTGTTGCAGGACAGATAATACCCTGGAATTTTCCGTTATTAATGTTCGCCTGGAAAGTTGGCCCTGCACTTGCTTGTGGTAACACTGTCGTACTAAAACCAGCAGAACAAACACCACTCTCTGCCCTGTATGTGTCAAAGTTATTCCATGAGGTATATAACCATTTTTAGTCTGCACCGGTCGTGAATTCACAGAATTCTAATGAGTACTCATTTGTACTTGTCATTTAGTTATTTCTAGTATGTTGTTTACAAATTTAGTAGTTTCAAATATAGAAGTGGAAACTTTCCACAATTATTGCAGCTCAAATCGAAGATTTCTCCATCTATACAAGATGATAGAATGTAATTTGTCTTCACTCCAACTGTCAGGTTGGACTTCCCCCTGGAGTCTTAAATGTCATTCCTGGATCCGGTAGTGCAGGTGCAGATCTTGCCAGTCATATGGATGTCGAT</genome_strand>
        <mrna_strand>GACATTATGCTTTGTATGAAATAAAGGTCCTCTAAGATTTCTGTAAGCAACTTTGAAAATTTCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGGTACTCCAACTACTGGAGAAAGGGTATCAGAAGGTTTTGTAGCAGTGCCGTGGTGCATGAAGAGCCAATCACTCCACCTGTTGAGGTTAAATATAATCAGCTTCTCATTAATGGACAGTTTGTTGATGCAGCCTCAG...............................................................................GGAAGACATTTCCTACATTTGACCCTCGAACAGGCGAAGCTATTACTACGGTTGCGGAGGCCGACACTGAAGATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAAGGACCATGGCCTAAAATGACTTGTGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTG............................................................................................................................................GTTGGGCTGATAAAATTCATGGTCTTACAGCTCCTGCTGACAGTTTGCACCATGTTCAGACCCTGCATGAGCCAATTGGTGTTGCAGGACAGATAATACCCTGGAATTTTCCGTTATTAATGTTCGCCTGGAAAGTTGGCCCTGCACTTGCTTGTGGTAACACTGTCGTACTAAAACCAGCAGAACAAACACCACTCTCTGCCCTGTATGTGTCAAAGTTATTCCATGAG...........................................................................................................................................................................................................................GTTGGACTTCCCCCTGGAGTCTTAAATGTCATTCCTGGATCCGGTAGTGCAGGTGCAGATCTTGCCAGTCATATGGATGTCGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U594105" ref_strand="+" ref_description="SGN-U594105 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157345500|emb|CAO14798.1| (e_value=4e-65) unnamed; (*ATH) AT1G23800.1 (e_value=1e-60)  Symbol: None | aldehyde dehydrogenase, mitochondrial (ALDH3), nearly identical to mitochondrial aldehyde dehydrogenase ALDH3 (Arabidopsis thaliana) gi:19850249:gb:AAL99612; contains Pfam profile PF00171: aldehyde dehydrogenase (NAD) family protein |... ; (*SWP) sp|Q8S528|AL2B7_ARATH (e_value=1e-59) Aldehyde dehydrogenase family 2 member B7, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B7; ">
      <seq>ctctctctttatgtaaacattatgctttgtatgaaataaaggtcctctaagatttctgtaagcaactttgaaaatttctttaggtactccaactactggagaaagggtatcagaaggttttgtagcagtgccgtggtgcatgaagagccaatcactccacctgttgaggttaaatataatcagcttctcattaatggacagtttgttgatgcagcctcagggaagacatttcctacatttgaccctcgaacaggcgaagctattactacggttgcggaggccgacactgaaaatgtcaaccgtgcagtctttgctgcccgtaaagcatttgatgaaggaccatggcctaaaatgacttgtgcagtaaccgaactttcttatctttccatatcctcttccttgtcccaacagtgagaggcggatttagaatttgaacttaacatgttcaacctttaaggttgggctgataaaattcatggtcttacagctcctgctgacagtttgcaccatgttcagaccctgcatgagccaattggtgttgcaggacagataataccctggaattttccgttattaatgttcgcctggaaagttggccctgcacttgcttgtggtaacactgtcgtactaaaaccagcagaacaaacaccactctctgccctgtatgtgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E02.1" temp_strand="-" temp_description="C02HBa0236E02.1  AC215430.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E02 sequenced_by:kribb upload_account_name:korea">
        <position start="123430" stop="119753"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="123130" g_stop="123052" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="79" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="123051" i_stop="121370" i_length="1682">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.901" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="121369" g_stop="121229" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="80" r_stop="220" r_length="141" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="121228" i_stop="121150" i_length="79">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.750" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="121149" g_stop="120913" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="221" r_stop="457" r_length="237" r_score="0.996"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="120912" i_stop="120266" i_length="647">
            <donor d_prob="0.177" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="120265" g_stop="120053" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="458" r_stop="670" r_length="213" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E02.1" gen_strand="-" ref_id="SGN-U594105" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>670</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U594105" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="123130" e_stop="123052"/>
          <exon e_start="121369" e_stop="121229"/>
          <exon e_start="121149" e_stop="120913"/>
          <exon e_start="120265" e_stop="120053"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTCTCTTTATGTAAACATTATGCTTTGTATGAAATAAAGGTCCTCTAAGATTTCTGTAAGCAACTTTGAAAATTTCTGTAAGTTCTTCTTTATTTAAATTCCGCAACTATGAAAATGGTAAGGAAAGAGTATGATTGTAGCTTCTCTTGTTCACTGATGACATGACAGTGTGAATAATTTTGATCAACTATGATTTAATCAGTTAAAAGTAATCTATTTATCTTATTTTTGAAATGACTAGTTTGGCTTTAGATGGTACTATAAAGTAGACCTCATTATTTTAGGTTACGCAGAGTGTTTACTTGATTGTCTAAACAAAATTTAGAAATAAATTTTGAACCTAAGCTAAACACAGAGTTAAAGGGTTTCATTTAATCATTAAATTTGTCCTCCGTTATAGTTCTTTTAAGGGAAAGCTCCGAATCAACCCATTTTATCCAAAAATGAAAAGATAAAACCACCCGCCCCTAATATAACCCGCATCCGACCAACTAACATGTAAAACCCACCCAAGTCCAAAGAAAGCAAAACTAACCCTTTAACGGCGGCGGCGGCGGCAGCGACGGCGCAACTTTTTTCCATGAGTTGATTTCCAAGAAAATGGAAATAACTTTGCCCGCATTGGATCTAACTAACAACTTATTGTTCTACCCAAGTCCAAGAAATCAAAAACAAACCCATATAATGGTAGCGTGGCGGCGGCGCGTCTTCTTCAATGGTTTCCAGGAGAAGGGGAAATAACTTTACCCACATCCGACCCAACTAACAAGTAAACCATCTTTCCCGTTATAGTTCTACCCAGGTCCAAGAAGGCAAATACAAACCCCTCTGGGCGTGGCAGCGGCGCATCTTCTTCCATGTCTTCCAAGAAAAGGGAAAATAACTTTGCCTTTTCCCATCTTCTACAGTTCCCTTAATTTTGCATTTTTTTAGAATCTAACTCAACAGTCCCTTTATGGACTTCATCACTTCTAACCAAACACAAATCCAACTAAGAAGAGATAAAACTCAATAAAATGAATAGCGTCCCAGAGGAAAATCTCAACACCTGAGTAGACATAAAAAAGAATCAACTTAGCAGTTAAATAAAATATCACATCATCAACAGCAGAAGTTGCCGCCTGAATCGCCACGAACCCAACCACAAAAGCAGAGACAAATTTCCCTTGCTGAAAGAATCAGCCCAAATCCACTACATTCTTGTACTGCAATTCCAATTACACTTGCCTCGAAATTGCCGCAAATACAGTAACTTGGTGACTTTTGAGGAAGATGGAAAAATTGATTCTTTTCTATTGGGTGGACAAACTCACCAAGAGTAATTAAAAATAAATATGGTCTGTTTTGAGGTTGAAGTTTAATTCAGGTGACATAGTACTTTGCTGGGTTTTGAGGAAACTGGAACAGTATTTGTTTTTTAATCATAATGTTGAGTTTATTTAATTTGGTTCGGATTTTAATTTGATGGGTTTGCGGTCGGATTCATTCTAACCAATAAAAGAATGTTGATGGTTATTTTATCTCCAATAACTATATTGCAAGTACTTGTAAACCAAAAATACATTCACAGATTATAATTAAAGTAGTCTTTTTCTAATCAGAAGAATTATTTTCACCCGTGTTTTCTTTCTTTGGTATCTTGATGATTGAACAAGCTAACTGTGTCTTGATATTACCCCACTTGATTTGTTTGATATTTTAACTGATTTTCTTGAGAAAGGAGCTAGCTAATTATAGGTTCTGCAATTTCAATCTACAGTTAGGTACTCCAACTACTGGAGAAAGGGTATCAGAAGGTTTTGTAGCAGTGCCGTGGTGCATGAAGAGCCAATCACTCCACCTGTTGAGGTTAAATATAATCAGCTTCTCATTAATGGACAGTTTGTTGATGCAGCCTCAGGTTGACCTAAAGTCTTTTCATTTATATGTTATTTCTTCTATAAATCTCAAGTGTAATATGGAGAATTCTACGTCTTCAGGGAAGACATTTCCTACATTTGACCCTCGAACAGGCGAAGCTATTACTACGGTTGCGGAGGCCGACACTGAAGATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAAGGACCATGGCCTAAAATGACTTGTGCAGTAACCGAACTTTCTTATCTTTCCATATCCTCTTCCTTGTCCCAACAGTGAGAGGCGGATTTAGAATTTGAACTTAACATGTTCAACCTTTAAGGTTCTTATCGCTGAACACATTGATCTATCGGACATACGTGTTTAGATTTTAATATTCTCTCATTTTAGTACTTTCACATATATATTTATTTCCTGTATTATATGGTCCCTCTACCGAAGTTAATTTCTCAGTTGGTCGTTCAACTAATAGTAATTATTTGAGTAATATAAGTCACTTTCTTTGTTGAAGAAAATTGGAATCAAGTTGAAAAATGACTTCTTGAGATAATAACTATTTAGCAAAGTGACCATATGAGAAATCAATCCGCCTCTGCAGACAACTACAGCTTGTTTAAACTCCCAGTCTTACTTAAGCATGTACAATAATGTACTTACTTAACCAAATATTTCCAGGAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGTTAAGAAAATAAGAAAAATGGCGTTATGTTTCCTTTTGACAGTTTAATAACCACTTATTGTATATCAATTGACGTTCTAATGTTTGCTGAATCACCCTAAATGCTTTTCTAAGTATTTCTGCTTACATTTCTTATTCAGGTTGGGCTGATAAAATTCATGGTCTTACAGCTCCTGCTGACAGTTTGCACCATGTTCAGACCCTGCATGAGCCAATTGGTGTTGCAGGACAGATAATACCCTGGAATTTTCCGTTATTAATGTTCGCCTGGAAAGTTGGCCCTGCACTTGCTTGTGGTAACACTGTCGTACTAAAACCAGCAGAACAAACACCACTCTCTGCCCTGTATGTGT</genome_strand>
        <mrna_strand>CTCTCTCTTTATGTAAACATTATGCTTTGTATGAAATAAAGGTCCTCTAAGATTTCTGTAAGCAACTTTGAAAATTTCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGGTACTCCAACTACTGGAGAAAGGGTATCAGAAGGTTTTGTAGCAGTGCCGTGGTGCATGAAGAGCCAATCACTCCACCTGTTGAGGTTAAATATAATCAGCTTCTCATTAATGGACAGTTTGTTGATGCAGCCTCAG...............................................................................GGAAGACATTTCCTACATTTGACCCTCGAACAGGCGAAGCTATTACTACGGTTGCGGAGGCCGACACTGAAAATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAAGGACCATGGCCTAAAATGACTTGTGCAGTAACCGAACTTTCTTATCTTTCCATATCCTCTTCCTTGTCCCAACAGTGAGAGGCGGATTTAGAATTTGAACTTAACATGTTCAACCTTTAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGGCTGATAAAATTCATGGTCTTACAGCTCCTGCTGACAGTTTGCACCATGTTCAGACCCTGCATGAGCCAATTGGTGTTGCAGGACAGATAATACCCTGGAATTTTCCGTTATTAATGTTCGCCTGGAAAGTTGGCCCTGCACTTGCTTGTGGTAACACTGTCGTACTAAAACCAGCAGAACAAACACCACTCTCTGCCCTGTATGTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U594107" ref_strand="+" ref_description="SGN-U594107 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|87247465|gb|ABD35815.1| (e_value=2e-45) putative; (*ATH) AT1G23800.1 (e_value=1e-43)  Symbol: None | aldehyde dehydrogenase, mitochondrial (ALDH3), nearly identical to mitochondrial aldehyde dehydrogenase ALDH3 (Arabidopsis thaliana) gi:19850249:gb:AAL99612; contains Pfam profile PF00171: aldehyde dehydrogenase (NAD) family protein |... ; (*SWP) sp|Q8S528|AL2B7_ARATH (e_value=9e-43) Aldehyde dehydrogenase family 2 member B7, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B7; ">
      <seq>gttaaatataatcagcttctcattaatggacagtttgttgatgcagcctcagggaagacatttcctacatttgaccctcgaacaggcgaagctattactacggttgcggaggccgacactgaagatgtcaaccgtgcagtctttgctgcccgtaaagcatttgatgaaggaccatggcctaaaatgacttgtgcagtaaccgaactttcttatctttccatatcctcttccttgtcccaacagtgagaggcggatttagaatttgaacttaacatgttcaacctttaaggaaaggtcatgtataatgttgcagtttgctgatttgcttgagaggcacagtgatgaacttgcagcacttgagacttgggataagggaaagccttacgaacaagctgcaaatgaagaaataccaatgctcattcgtcttttcagatactatgctggttaagaaaataagaaaaatggcgttatgtttccttttgacagtttaataaccacttattgtatatcaattgacgttctaatgtttgctgaatcaccctaaatgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E02.1" temp_strand="-" temp_description="C02HBa0236E02.1  AC215430.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E02 sequenced_by:kribb upload_account_name:korea">
        <position start="121580" stop="120000"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="121280" g_stop="121229" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="52" r_length="52" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="121228" i_stop="121150" i_length="79">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.750" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="121149" g_stop="120913" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="53" r_stop="289" r_length="237" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="120912" i_stop="120560" i_length="353">
            <donor d_prob="0.177" d_score="1.00"/>
            <acceptor a_prob="0.922" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="120559" g_stop="120300" g_length="260"/>
          <reference_exon_boundary r_type="cDNA" r_start="290" r_stop="549" r_length="260" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E02.1" gen_strand="-" ref_id="SGN-U594107" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>549</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U594107" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="121280" e_stop="121229"/>
          <exon e_start="121149" e_stop="120913"/>
          <exon e_start="120559" e_stop="120300"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTAAATATAATCAGCTTCTCATTAATGGACAGTTTGTTGATGCAGCCTCAGGTTGACCTAAAGTCTTTTCATTTATATGTTATTTCTTCTATAAATCTCAAGTGTAATATGGAGAATTCTACGTCTTCAGGGAAGACATTTCCTACATTTGACCCTCGAACAGGCGAAGCTATTACTACGGTTGCGGAGGCCGACACTGAAGATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAAGGACCATGGCCTAAAATGACTTGTGCAGTAACCGAACTTTCTTATCTTTCCATATCCTCTTCCTTGTCCCAACAGTGAGAGGCGGATTTAGAATTTGAACTTAACATGTTCAACCTTTAAGGTTCTTATCGCTGAACACATTGATCTATCGGACATACGTGTTTAGATTTTAATATTCTCTCATTTTAGTACTTTCACATATATATTTATTTCCTGTATTATATGGTCCCTCTACCGAAGTTAATTTCTCAGTTGGTCGTTCAACTAATAGTAATTATTTGAGTAATATAAGTCACTTTCTTTGTTGAAGAAAATTGGAATCAAGTTGAAAAATGACTTCTTGAGATAATAACTATTTAGCAAAGTGACCATATGAGAAATCAATCCGCCTCTGCAGACAACTACAGCTTGTTTAAACTCCCAGTCTTACTTAAGCATGTACAATAATGTACTTACTTAACCAAATATTTCCAGGAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGTTAAGAAAATAAGAAAAATGGCGTTATGTTTCCTTTTGACAGTTTAATAACCACTTATTGTATATCAATTGACGTTCTAATGTTTGCTGAATCACCCTAAATGCT</genome_strand>
        <mrna_strand>GTTAAATATAATCAGCTTCTCATTAATGGACAGTTTGTTGATGCAGCCTCAG...............................................................................GGAAGACATTTCCTACATTTGACCCTCGAACAGGCGAAGCTATTACTACGGTTGCGGAGGCCGACACTGAAGATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAAGGACCATGGCCTAAAATGACTTGTGCAGTAACCGAACTTTCTTATCTTTCCATATCCTCTTCCTTGTCCCAACAGTGAGAGGCGGATTTAGAATTTGAACTTAACATGTTCAACCTTTAAG.................................................................................................................................................................................................................................................................................................................................................................GAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGTTAAGAAAATAAGAAAAATGGCGTTATGTTTCCTTTTGACAGTTTAATAACCACTTATTGTATATCAATTGACGTTCTAATGTTTGCTGAATCACCCTAAATGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U584016" ref_strand="+" ref_description="SGN-U584016 Tomato 200607#2 [12 ESTs aligned] (*GB) gi|157345500|emb|CAO14798.1| (e_value=2e-29) unnamed; (*ATH) AT1G23800.1 (e_value=1e-27)  Symbol: None | aldehyde dehydrogenase, mitochondrial (ALDH3), nearly identical to mitochondrial aldehyde dehydrogenase ALDH3 (Arabidopsis thaliana) gi:19850249:gb:AAL99612; contains Pfam profile PF00171: aldehyde dehydrogenase (NAD) family protein |... ; (*SWP) sp|Q8S528|AL2B7_ARATH (e_value=1e-26) Aldehyde dehydrogenase family 2 member B7, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B7; ">
      <seq>tttactcattttgaatgctctctctttatgtaaacattatgctttgtatgaaataaaggtcctctaagatttctgtaagcaactttgaaaatttctttaggtactccaactactggagaaagggtatcagaaggttttgtagcagtgccgtggtgcatgaagagccaatcactccacctgttgaggttaaatataatcagcttctcattaatggacagtttgttgatgcagcctcagggaagacatttcctacatttgaccctcgaacaggcgaagctattactacggttgcggaggccgacactgaagatgtcaaccgtgcagtctttgctgcccgtaaagcatttgatgaaggaccatggcctaaaatgacttgtgcagtaaccgaactttcttatctttccatatcctcttccttgtcccaacagtgagaggcggatttagaatttgaacttaacatgttcaacctttaaggttcttatcgctgaacacattgatctatcggacatacgtgtttagattttaatattctctcattttagtactttcacatatatatttatttcctgtattatatggtccctctaccgaagttaatttctcagttggtcgttcaactaatagtaattatttgagtaatataagtcactttctttgttgaagaaaattggaatcaagttgaaaaatgacttcttgagataataactatttagcaaagtgaccatatgagaaatcaatccgcctctgcagacaactacagcttgtttaaactcccagtcttacttaagcatgtacaataatgtacttacttaaccaaatatttccaggaaaggtcatgtataatgttgcagtttgctgatttgcttgagaggcacagtgatgaacttgcagcacttgagacttgggataagggaaagccttacgaacaagctgcaaatgaagaaataccaatgctcattcgtcttttcagatactatgctggttaagaaaataagaaaaatggcgttatgtttccttttgacagtttaataaccacttattgtatatcaattgacgttctaatggtttgctgaatcacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E02.1" temp_strand="-" temp_description="C02HBa0236E02.1  AC215430.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E02 sequenced_by:kribb upload_account_name:korea">
        <position start="123440" stop="120009"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="123147" g_stop="123052" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="96" r_length="96" r_score="0.938"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="123051" i_stop="121370" i_length="1682">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.901" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="121369" g_stop="121229" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="97" r_stop="237" r_length="141" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="121228" i_stop="121150" i_length="79">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.750" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="121149" g_stop="120309" g_length="841"/>
          <reference_exon_boundary r_type="cDNA" r_start="238" r_stop="1079" r_length="842" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E02.1" gen_strand="-" ref_id="SGN-U584016" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>1078</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U584016" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="123147" e_stop="123052"/>
          <exon e_start="121369" e_stop="121229"/>
          <exon e_start="121149" e_stop="120309"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGAACAATTTTGAATGCTCTCTCTTTATGTAAACATTATGCTTTGTATGAAATAAAGGTCCTCTAAGATTTCTGTAAGCAACTTTGAAAATTTCTGTAAGTTCTTCTTTATTTAAATTCCGCAACTATGAAAATGGTAAGGAAAGAGTATGATTGTAGCTTCTCTTGTTCACTGATGACATGACAGTGTGAATAATTTTGATCAACTATGATTTAATCAGTTAAAAGTAATCTATTTATCTTATTTTTGAAATGACTAGTTTGGCTTTAGATGGTACTATAAAGTAGACCTCATTATTTTAGGTTACGCAGAGTGTTTACTTGATTGTCTAAACAAAATTTAGAAATAAATTTTGAACCTAAGCTAAACACAGAGTTAAAGGGTTTCATTTAATCATTAAATTTGTCCTCCGTTATAGTTCTTTTAAGGGAAAGCTCCGAATCAACCCATTTTATCCAAAAATGAAAAGATAAAACCACCCGCCCCTAATATAACCCGCATCCGACCAACTAACATGTAAAACCCACCCAAGTCCAAAGAAAGCAAAACTAACCCTTTAACGGCGGCGGCGGCGGCAGCGACGGCGCAACTTTTTTCCATGAGTTGATTTCCAAGAAAATGGAAATAACTTTGCCCGCATTGGATCTAACTAACAACTTATTGTTCTACCCAAGTCCAAGAAATCAAAAACAAACCCATATAATGGTAGCGTGGCGGCGGCGCGTCTTCTTCAATGGTTTCCAGGAGAAGGGGAAATAACTTTACCCACATCCGACCCAACTAACAAGTAAACCATCTTTCCCGTTATAGTTCTACCCAGGTCCAAGAAGGCAAATACAAACCCCTCTGGGCGTGGCAGCGGCGCATCTTCTTCCATGTCTTCCAAGAAAAGGGAAAATAACTTTGCCTTTTCCCATCTTCTACAGTTCCCTTAATTTTGCATTTTTTTAGAATCTAACTCAACAGTCCCTTTATGGACTTCATCACTTCTAACCAAACACAAATCCAACTAAGAAGAGATAAAACTCAATAAAATGAATAGCGTCCCAGAGGAAAATCTCAACACCTGAGTAGACATAAAAAAGAATCAACTTAGCAGTTAAATAAAATATCACATCATCAACAGCAGAAGTTGCCGCCTGAATCGCCACGAACCCAACCACAAAAGCAGAGACAAATTTCCCTTGCTGAAAGAATCAGCCCAAATCCACTACATTCTTGTACTGCAATTCCAATTACACTTGCCTCGAAATTGCCGCAAATACAGTAACTTGGTGACTTTTGAGGAAGATGGAAAAATTGATTCTTTTCTATTGGGTGGACAAACTCACCAAGAGTAATTAAAAATAAATATGGTCTGTTTTGAGGTTGAAGTTTAATTCAGGTGACATAGTACTTTGCTGGGTTTTGAGGAAACTGGAACAGTATTTGTTTTTTAATCATAATGTTGAGTTTATTTAATTTGGTTCGGATTTTAATTTGATGGGTTTGCGGTCGGATTCATTCTAACCAATAAAAGAATGTTGATGGTTATTTTATCTCCAATAACTATATTGCAAGTACTTGTAAACCAAAAATACATTCACAGATTATAATTAAAGTAGTCTTTTTCTAATCAGAAGAATTATTTTCACCCGTGTTTTCTTTCTTTGGTATCTTGATGATTGAACAAGCTAACTGTGTCTTGATATTACCCCACTTGATTTGTTTGATATTTTAACTGATTTTCTTGAGAAAGGAGCTAGCTAATTATAGGTTCTGCAATTTCAATCTACAGTTAGGTACTCCAACTACTGGAGAAAGGGTATCAGAAGGTTTTGTAGCAGTGCCGTGGTGCATGAAGAGCCAATCACTCCACCTGTTGAGGTTAAATATAATCAGCTTCTCATTAATGGACAGTTTGTTGATGCAGCCTCAGGTTGACCTAAAGTCTTTTCATTTATATGTTATTTCTTCTATAAATCTCAAGTGTAATATGGAGAATTCTACGTCTTCAGGGAAGACATTTCCTACATTTGACCCTCGAACAGGCGAAGCTATTACTACGGTTGCGGAGGCCGACACTGAAGATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAAGGACCATGGCCTAAAATGACTTGTGCAGTAACCGAACTTTCTTATCTTTCCATATCCTCTTCCTTGTCCCAACAGTGAGAGGCGGATTTAGAATTTGAACTTAACATGTTCAACCTTTAAGGTTCTTATCGCTGAACACATTGATCTATCGGACATACGTGTTTAGATTTTAATATTCTCTCATTTTAGTACTTTCACATATATATTTATTTCCTGTATTATATGGTCCCTCTACCGAAGTTAATTTCTCAGTTGGTCGTTCAACTAATAGTAATTATTTGAGTAATATAAGTCACTTTCTTTGTTGAAGAAAATTGGAATCAAGTTGAAAAATGACTTCTTGAGATAATAACTATTTAGCAAAGTGACCATATGAGAAATCAATCCGCCTCTGCAGACAACTACAGCTTGTTTAAACTCCCAGTCTTACTTAAGCATGTACAATAATGTACTTACTTAACCAAATATTTCCAGGAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGTTAAGAAAATAAGAAAAATGGCGTTATGTTTCCTTTTGACAGTTTAATAACCACTTATTGTATATCAATTGACGTTCTAAT-GTTTGCTGAATCACC</genome_strand>
        <mrna_strand>TTTACTCATTTTGAATGCTCTCTCTTTATGTAAACATTATGCTTTGTATGAAATAAAGGTCCTCTAAGATTTCTGTAAGCAACTTTGAAAATTTCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGGTACTCCAACTACTGGAGAAAGGGTATCAGAAGGTTTTGTAGCAGTGCCGTGGTGCATGAAGAGCCAATCACTCCACCTGTTGAGGTTAAATATAATCAGCTTCTCATTAATGGACAGTTTGTTGATGCAGCCTCAG...............................................................................GGAAGACATTTCCTACATTTGACCCTCGAACAGGCGAAGCTATTACTACGGTTGCGGAGGCCGACACTGAAGATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAAGGACCATGGCCTAAAATGACTTGTGCAGTAACCGAACTTTCTTATCTTTCCATATCCTCTTCCTTGTCCCAACAGTGAGAGGCGGATTTAGAATTTGAACTTAACATGTTCAACCTTTAAGGTTCTTATCGCTGAACACATTGATCTATCGGACATACGTGTTTAGATTTTAATATTCTCTCATTTTAGTACTTTCACATATATATTTATTTCCTGTATTATATGGTCCCTCTACCGAAGTTAATTTCTCAGTTGGTCGTTCAACTAATAGTAATTATTTGAGTAATATAAGTCACTTTCTTTGTTGAAGAAAATTGGAATCAAGTTGAAAAATGACTTCTTGAGATAATAACTATTTAGCAAAGTGACCATATGAGAAATCAATCCGCCTCTGCAGACAACTACAGCTTGTTTAAACTCCCAGTCTTACTTAAGCATGTACAATAATGTACTTACTTAACCAAATATTTCCAGGAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGTTAAGAAAATAAGAAAAATGGCGTTATGTTTCCTTTTGACAGTTTAATAACCACTTATTGTATATCAATTGACGTTCTAATGGTTTGCTGAATCACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U584020" ref_strand="+" ref_description="SGN-U584020 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|73647513|gb|AAZ79355.1| (e_value=5e-14) aldehyde; (*ATH) AT3G48000.1 (e_value=7e-19)  Symbol: None | aldehyde dehydrogenase (ALDH2), identical to aldehyde dehydrogenase (Arabidopsis thaliana) GI:8574427; similar to mitochondrial aldehyde dehydrogenase (Arabidopsis thaliana) gi:19850249:gb:AAL99612; identical to cDNA aldehyde dehydrog... ; (*SWP) sp|Q9SU63|AL2B4_ARATH (e_value=6e-18) Aldehyde dehydrogenase family 2 member B4, mitochondrial OS=Arabidopsis thaliana GN=ALDH2B4; ">
      <seq>gcaacttttttccatgagttgatttccaagaaaatggaaataactttgcccgcattggatctaactaacaacttattgttctacccaagtccaagaaatcaaaaacaaacccatataatggtagcgtggcggcggcgcgtcttcttcaatggtttccaggagaaggggaaataactttacccacatccgacccaactaacaagtaaaccatctttcccgttatagttctacccaggtccaagaaggcaaatacaaacccctctgggcgtggcagcggcgcatcttcttccatgtcttccaagaaaagggaaaataactttgccttttcccatcttctacagttcccttaattttgcatttttttagaatctaactcaacagtccctttatggacttcatcacttctaaccaaacacaaatccaactaagaagagataaaactcaataaaatgaatagcgtcccagaggaaaatctcaacacctgagtagacataaaaaagaatcaacttagcagttaaataaaatatcacatcatcaacagcagaagttgccgcctgaatcgccacgaacccaaccacaaaagcagagacaaatttcccttgctgaaagaatcagcccaaatccactacattcttgtactgcaattccaattacacttgcctcgaaattgccgcaaatacagtaacttggtgacttttgaggaagatggaaaaattgattcttttctatttgggtggacaaactcaccaagagtaattaaaaataaatatggtctgttttgaggttgaagtttaattcagttaggtacctccaactactggagaaagggtatcagaaggttttgtagcagtgccgtggtgcatgaagagccaatcactccacctgttgaggttaaatataatcagcttctcattaatggacagttttgttgatgcagcctcagggaagacatttcctacatttgaccctcgaacaggcgaagctattactacggttgcggaggccgacactgaagatgtcaaccgtgcagtctttgctgcccgtaaagcatttgatgaatgacca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E02.1" temp_strand="-" temp_description="C02HBa0236E02.1  AC215430.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E02 sequenced_by:kribb upload_account_name:korea">
        <position start="122861" stop="120728"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="122561" g_stop="121763" g_length="799"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="800" r_length="800" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="121762" i_stop="121370" i_length="393">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.901" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="121369" g_stop="121229" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="801" r_stop="943" r_length="143" r_score="0.972"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="121228" i_stop="121150" i_length="79">
            <donor d_prob="0.986" d_score="0.96"/>
            <acceptor a_prob="0.750" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="121149" g_stop="121028" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="944" r_stop="1065" r_length="122" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E02.1" gen_strand="-" ref_id="SGN-U584020" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>1062</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U584020" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="122561" e_stop="121763"/>
          <exon e_start="121369" e_stop="121229"/>
          <exon e_start="121149" e_stop="121028"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAACTTTTTTCCATGAGTTGATTTCCAAGAAAATGGAAATAACTTTGCCCGCATTGGATCTAACTAACAACTTATTGTTCTACCCAAGTCCAAGAAATCAAAAACAAACCCATATAATGGTAGCGTGGCGGCGGCGCGTCTTCTTCAATGGTTTCCAGGAGAAGGGGAAATAACTTTACCCACATCCGACCCAACTAACAAGTAAACCATCTTTCCCGTTATAGTTCTACCCAGGTCCAAGAAGGCAAATACAAACCCCTCTGGGCGTGGCAGCGGCGCATCTTCTTCCATGTCTTCCAAGAAAAGGGAAAATAACTTTGCCTTTTCCCATCTTCTACAGTTCCCTTAATTTTGCATTTTTTTAGAATCTAACTCAACAGTCCCTTTATGGACTTCATCACTTCTAACCAAACACAAATCCAACTAAGAAGAGATAAAACTCAATAAAATGAATAGCGTCCCAGAGGAAAATCTCAACACCTGAGTAGACATAAAAAAGAATCAACTTAGCAGTTAAATAAAATATCACATCATCAACAGCAGAAGTTGCCGCCTGAATCGCCACGAACCCAACCACAAAAGCAGAGACAAATTTCCCTTGCTGAAAGAATCAGCCCAAATCCACTACATTCTTGTACTGCAATTCCAATTACACTTGCCTCGAAATTGCCGCAAATACAGTAACTTGGTGACTTTTGAGGAAGATGGAAAAATTGATTCTTTTCTA-TTGGGTGGACAAACTCACCAAGAGTAATTAAAAATAAATATGGTCTGTTTTGAGGTTGAAGTTTAATTCAGGTGACATAGTACTTTGCTGGGTTTTGAGGAAACTGGAACAGTATTTGTTTTTTAATCATAATGTTGAGTTTATTTAATTTGGTTCGGATTTTAATTTGATGGGTTTGCGGTCGGATTCATTCTAACCAATAAAAGAATGTTGATGGTTATTTTATCTCCAATAACTATATTGCAAGTACTTGTAAACCAAAAATACATTCACAGATTATAATTAAAGTAGTCTTTTTCTAATCAGAAGAATTATTTTCACCCGTGTTTTCTTTCTTTGGTATCTTGATGATTGAACAAGCTAACTGTGTCTTGATATTACCCCACTTGATTTGTTTGATATTTTAACTGATTTTCTTGAGAAAGGAGCTAGCTAATTATAGGTTCTGCAATTTCAATCTACAGTTAGGTA-CTCCAACTACTGGAGAAAGGGTATCAGAAGGTTTTGTAGCAGTGCCGTGGTGCATGAAGAGCCAATCACTCCACCTGTTGAGGTTAAATATAATCAGCTTCTCATTAATGGACAG-TTTGTTGATGCAGCCTCAGGTTGACCTAAAGTCTTTTCATTTATATGTTATTTCTTCTATAAATCTCAAGTGTAATATGGAGAATTCTACGTCTTCAGGGAAGACATTTCCTACATTTGACCCTCGAACAGGCGAAGCTATTACTACGGTTGCGGAGGCCGACACTGAAGATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAAGGACCA</genome_strand>
        <mrna_strand>GCAACTTTTTTCCATGAGTTGATTTCCAAGAAAATGGAAATAACTTTGCCCGCATTGGATCTAACTAACAACTTATTGTTCTACCCAAGTCCAAGAAATCAAAAACAAACCCATATAATGGTAGCGTGGCGGCGGCGCGTCTTCTTCAATGGTTTCCAGGAGAAGGGGAAATAACTTTACCCACATCCGACCCAACTAACAAGTAAACCATCTTTCCCGTTATAGTTCTACCCAGGTCCAAGAAGGCAAATACAAACCCCTCTGGGCGTGGCAGCGGCGCATCTTCTTCCATGTCTTCCAAGAAAAGGGAAAATAACTTTGCCTTTTCCCATCTTCTACAGTTCCCTTAATTTTGCATTTTTTTAGAATCTAACTCAACAGTCCCTTTATGGACTTCATCACTTCTAACCAAACACAAATCCAACTAAGAAGAGATAAAACTCAATAAAATGAATAGCGTCCCAGAGGAAAATCTCAACACCTGAGTAGACATAAAAAAGAATCAACTTAGCAGTTAAATAAAATATCACATCATCAACAGCAGAAGTTGCCGCCTGAATCGCCACGAACCCAACCACAAAAGCAGAGACAAATTTCCCTTGCTGAAAGAATCAGCCCAAATCCACTACATTCTTGTACTGCAATTCCAATTACACTTGCCTCGAAATTGCCGCAAATACAGTAACTTGGTGACTTTTGAGGAAGATGGAAAAATTGATTCTTTTCTATTTGGGTGGACAAACTCACCAAGAGTAATTAAAAATAAATATGGTCTGTTTTGAGGTTGAAGTTTAATTCAG.........................................................................................................................................................................................................................................................................................................................................................................................................TTAGGTACCTCCAACTACTGGAGAAAGGGTATCAGAAGGTTTTGTAGCAGTGCCGTGGTGCATGAAGAGCCAATCACTCCACCTGTTGAGGTTAAATATAATCAGCTTCTCATTAATGGACAGTTTTGTTGATGCAGCCTCAG...............................................................................GGAAGACATTTCCTACATTTGACCCTCGAACAGGCGAAGCTATTACTACGGTTGCGGAGGCCGACACTGAAGATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAATGACCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U594106" ref_strand="+" ref_description="SGN-U594106 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>gtgttcttttgaatgctctctctttatgtaaacattatgctttgtatgaaataaaggtcctctaagatttctgtaagcatactttgaaaatttctttaggtactccaactactggagaaacggtatcacaatgttttgtagcactgccgtggtgcatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E02.1" temp_strand="-" temp_description="C02HBa0236E02.1  AC215430.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E02 sequenced_by:kribb upload_account_name:korea">
        <position start="123439" stop="121006"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="123145" g_stop="123052" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="95" r_length="95" r_score="0.926"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="123051" i_stop="121370" i_length="1682">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.901" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="121369" g_stop="121306" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="96" r_stop="159" r_length="64" r_score="0.938"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E02.1" gen_strand="-" ref_id="SGN-U594106" ref_strand="+">
        <total_alignment_score>0.930</total_alignment_score>
        <cumulative_length_of_scored_exons>158</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U594106" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="123145" e_stop="123052"/>
          <exon e_start="121369" e_stop="121306"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAACAATTTTGAATGCTCTCTCTTTATGTAAACATTATGCTTTGTATGAAATAAAGGTCCTCTAAGATTTCTGTAAGCA-ACTTTGAAAATTTCTGTAAGTTCTTCTTTATTTAAATTCCGCAACTATGAAAATGGTAAGGAAAGAGTATGATTGTAGCTTCTCTTGTTCACTGATGACATGACAGTGTGAATAATTTTGATCAACTATGATTTAATCAGTTAAAAGTAATCTATTTATCTTATTTTTGAAATGACTAGTTTGGCTTTAGATGGTACTATAAAGTAGACCTCATTATTTTAGGTTACGCAGAGTGTTTACTTGATTGTCTAAACAAAATTTAGAAATAAATTTTGAACCTAAGCTAAACACAGAGTTAAAGGGTTTCATTTAATCATTAAATTTGTCCTCCGTTATAGTTCTTTTAAGGGAAAGCTCCGAATCAACCCATTTTATCCAAAAATGAAAAGATAAAACCACCCGCCCCTAATATAACCCGCATCCGACCAACTAACATGTAAAACCCACCCAAGTCCAAAGAAAGCAAAACTAACCCTTTAACGGCGGCGGCGGCGGCAGCGACGGCGCAACTTTTTTCCATGAGTTGATTTCCAAGAAAATGGAAATAACTTTGCCCGCATTGGATCTAACTAACAACTTATTGTTCTACCCAAGTCCAAGAAATCAAAAACAAACCCATATAATGGTAGCGTGGCGGCGGCGCGTCTTCTTCAATGGTTTCCAGGAGAAGGGGAAATAACTTTACCCACATCCGACCCAACTAACAAGTAAACCATCTTTCCCGTTATAGTTCTACCCAGGTCCAAGAAGGCAAATACAAACCCCTCTGGGCGTGGCAGCGGCGCATCTTCTTCCATGTCTTCCAAGAAAAGGGAAAATAACTTTGCCTTTTCCCATCTTCTACAGTTCCCTTAATTTTGCATTTTTTTAGAATCTAACTCAACAGTCCCTTTATGGACTTCATCACTTCTAACCAAACACAAATCCAACTAAGAAGAGATAAAACTCAATAAAATGAATAGCGTCCCAGAGGAAAATCTCAACACCTGAGTAGACATAAAAAAGAATCAACTTAGCAGTTAAATAAAATATCACATCATCAACAGCAGAAGTTGCCGCCTGAATCGCCACGAACCCAACCACAAAAGCAGAGACAAATTTCCCTTGCTGAAAGAATCAGCCCAAATCCACTACATTCTTGTACTGCAATTCCAATTACACTTGCCTCGAAATTGCCGCAAATACAGTAACTTGGTGACTTTTGAGGAAGATGGAAAAATTGATTCTTTTCTATTGGGTGGACAAACTCACCAAGAGTAATTAAAAATAAATATGGTCTGTTTTGAGGTTGAAGTTTAATTCAGGTGACATAGTACTTTGCTGGGTTTTGAGGAAACTGGAACAGTATTTGTTTTTTAATCATAATGTTGAGTTTATTTAATTTGGTTCGGATTTTAATTTGATGGGTTTGCGGTCGGATTCATTCTAACCAATAAAAGAATGTTGATGGTTATTTTATCTCCAATAACTATATTGCAAGTACTTGTAAACCAAAAATACATTCACAGATTATAATTAAAGTAGTCTTTTTCTAATCAGAAGAATTATTTTCACCCGTGTTTTCTTTCTTTGGTATCTTGATGATTGAACAAGCTAACTGTGTCTTGATATTACCCCACTTGATTTGTTTGATATTTTAACTGATTTTCTTGAGAAAGGAGCTAGCTAATTATAGGTTCTGCAATTTCAATCTACAGTTAGGTACTCCAACTACTGGAGAAAGGGTATCAGAAGGTTTTGTAGCAGTGCCGTGGTGCATGA</genome_strand>
        <mrna_strand>GTGTTCTTTTGAATGCTCTCTCTTTATGTAAACATTATGCTTTGTATGAAATAAAGGTCCTCTAAGATTTCTGTAAGCATACTTTGAAAATTTCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGGTACTCCAACTACTGGAGAAACGGTATCACAATGTTTTGTAGCACTGCCGTGGTGCATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U582910" ref_strand="+" ref_description="SGN-U582910 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|147781443|emb|CAN67221.1| (e_value=1e-12) hypothetical; (*ATH) AT5G14870.1 (e_value=2e-12) | Symbol: None | cyclic nucleotide-regulated ion channel, putative (CNGC18), similar to cyclic nucleotide and calmodulin-regulated ion channel (cngc6) GI:4581207 from (Arabidopsis thaliana) | chr5:4808094-4810900 REVERSE | Aliases: T9L3.170, T9L3_170; (*SWP) sp|Q9LEQ3|CNG18_ARATH (e_value=1e-11) Putative cyclic nucleotide-gated ion channel 18 OS=Arabidopsis thaliana GN=CNGC18; ">
      <seq>agtgtcatcagtgaacaagagaagctacaatcatattctttccttaccttccctttttatattgttattctaaatagtttatcaataacttcataaaattaatacataaattatataaaaaaaattctattatactcatgatagttaattacttcgaaaatagatatttgatcaacttaagaaaattagtaattaattttcatattataattttgaaaaggaatctctaacaaacaaattaaaaataaaagatgatttacctatcatttttttgaaaaattaactttaatgaaagtgaaatccaaaccaggtgagagatataaaaaaaaaaaaaggaaaagagagagtacctaaattaagatgccagtccattcttttgcacataaacagtagtaaagaccgtagtataaataccttgaagtgcgaagctgagaaatgatccgtcgtgtatgagtattcattgctggagaccgagaaaattaaatagagatggagaagaagagataagaatcggagcaacgtcaagaattcagataccagagtaatttttggaccagagaccagatttgctgctgctaaaaatgcagagaaaaatcaggctcatctggcttaaacagcttgggcatttttaagctagaagaagaatcagccatcttctgttctattcctcttctcgtattagtagcaaatcgtttggccaaaattgtagctccaagttgttgggaaccacgagaaccactggctactaacggttgctcaggaccagcgtcatcaaaactttgctcattgtagttaccctcatcattaggatcttgattataataatagctctctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E02.1" temp_strand="+" temp_description="C02HBa0236E02.1  AC215430.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E02 sequenced_by:kribb upload_account_name:korea">
        <position start="125913" stop="127794"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="126213" g_stop="126792" g_length="580"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="589" r_length="589" r_score="0.969"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="126793" i_stop="127248" i_length="456">
            <donor d_prob="0.967" d_score="0.92"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="127249" g_stop="127494" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="590" r_stop="835" r_length="246" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E02.1" gen_strand="+" ref_id="SGN-U582910" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>826</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U582910" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="126213" e_stop="126792"/>
          <exon e_start="127249" e_stop="127494"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTGTCATCAGTGAACAAGAGAAGCTACAATCATATTCTTTCCTTACCTTCCCTTTTTATATTGTTATTCTAAATAGTTTATCAATAACTTCATAAAATTAATACATAAATTATATAAAAAAAATTCTATTATACTCATGATAGTTAATTACTTCGAAAATAGATATTTGATCAACTTAAGAAAATTAGTAATTAATTTTCATATTATAATTTTGAAAAGGAATCTCTAACAAACAAATTAAAAATAAAAGATGATTTACCTATCATTTTTTTGAAAAATTAACTTTAATGAAAGTGAAATCCAAA-CAGGTGAGAGATATAAAAAAAAAAAAAGGAAAAGAGAGAGTA-CTAAATTAAGATG-CAGTCCATTCTTTTGCACATAAACAGTAGTAAAGA-CGTAGTATAAATA-CTTGAAGTGCGAAGCTGAGAAATGATCCGTCGTGTATGAGTATTCATTGCTGGAGA-CGAGAAAATTAAATAGAGATGGAGAAGAAGAGATAAGAATCGGAGCAACGTCAAGAATTCAGATA-CAGAGTAATTTTTGGA-CAGAGA-CAGATTTGCTGCTGCTAAAAATGCAGAGGTAGTCTAACTACTTGCACGTCATCAATTAGCTGATTCATTAGATATAAGCTTATCCCTTTTCTTCTCTGTGTTCCATTCCACTATTCCTTTCCTGAACCCTATGAAAAAAATATTGCCTTCTTTTTTTTCTGTCCAATCAAAAACAATCTAATATGTACAGGTAAAACTTACCCACAATATGTTTGGCGTAAACATCCGGTACGGGTAAGTTTTTTCCAATATTACCTTTGGAACTAGATAACTTTTAGGCACAATCAACTAGAAAAGAAGGTTGTATTTCACATGATTGAAAAGGGAATAATGTTGTAATCAAAAAGGCCTATAGTTCCTGAAATTTACAAAAAAGTTTTAAAAAAAAGGGTACTAGCTTTGTCATTACTCACCAGTCACCAGTACCTTTCAGTAATGCAAGGTGTTCTAACTAATTACATATGATGTGGCCTTCATTCTGCAGAAAAATCAGGCTCATCTGGCTTAAACAGCTTGGGCATTTTTAAGCTAGAAGAAGAATCAGCCATCTTCTGTTCTATTCCTCTTCTCGTATTAGTAGCAAATCGTTTGGCCAAAATTGTAGCTCCAAGTTGTTGGGAACCACGAGAACCACTGGCTACTAACGGTTGCTCAGGACCAGCGTCATCAAAACTTTGCTCATTGTAGTTACCCTCATCATTAGGATCTTGATTATAATAATAGCTCTCTT</genome_strand>
        <mrna_strand>AGTGTCATCAGTGAACAAGAGAAGCTACAATCATATTCTTTCCTTACCTTCCCTTTTTATATTGTTATTCTAAATAGTTTATCAATAACTTCATAAAATTAATACATAAATTATATAAAAAAAATTCTATTATACTCATGATAGTTAATTACTTCGAAAATAGATATTTGATCAACTTAAGAAAATTAGTAATTAATTTTCATATTATAATTTTGAAAAGGAATCTCTAACAAACAAATTAAAAATAAAAGATGATTTACCTATCATTTTTTTGAAAAATTAACTTTAATGAAAGTGAAATCCAAACCAGGTGAGAGATATAAAAAAAAAAAAAGGAAAAGAGAGAGTACCTAAATTAAGATGCCAGTCCATTCTTTTGCACATAAACAGTAGTAAAGACCGTAGTATAAATACCTTGAAGTGCGAAGCTGAGAAATGATCCGTCGTGTATGAGTATTCATTGCTGGAGACCGAGAAAATTAAATAGAGATGGAGAAGAAGAGATAAGAATCGGAGCAACGTCAAGAATTCAGATACCAGAGTAATTTTTGGACCAGAGACCAGATTTGCTGCTGCTAAAAATGCAGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAATCAGGCTCATCTGGCTTAAACAGCTTGGGCATTTTTAAGCTAGAAGAAGAATCAGCCATCTTCTGTTCTATTCCTCTTCTCGTATTAGTAGCAAATCGTTTGGCCAAAATTGTAGCTCCAAGTTGTTGGGAACCACGAGAACCACTGGCTACTAACGGTTGCTCAGGACCAGCGTCATCAAAACTTTGCTCATTGTAGTTACCCTCATCATTAGGATCTTGATTATAATAATAGCTCTCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U582911" ref_strand="+" ref_description="SGN-U582911 Tomato 200607#2 [6 ESTs aligned] (*GB) gi|157342248|emb|CAO64361.1| (e_value=3e-92) unnamed; (*ATH) AT5G14870.1 (e_value=1e-89) | Symbol: None | cyclic nucleotide-regulated ion channel, putative (CNGC18), similar to cyclic nucleotide and calmodulin-regulated ion channel (cngc6) GI:4581207 from (Arabidopsis thaliana) | chr5:4808094-4810900 REVERSE | Aliases: T9L3.170, T9L3_170; (*SWP) sp|Q9LEQ3|CNG18_ARATH (e_value=9e-89) Putative cyclic nucleotide-gated ion channel 18 OS=Arabidopsis thaliana GN=CNGC18; ">
      <seq>gaaaaaaaaaaaggataagagagagtactaaattaagatgcggtgcattctttggcacataaacggcagtaaagacgtggtctaaatacttgaagtgcgaagctgagaaatgatccgtcgagtatgagtattcattgctggagacgagaaaattaaatagagatggagaagaagagatgagaattggagcagcgtcaagaattcatatacagagtaatttttggacagagacagatttgctgctgctaaaaatgcagagaaaaatcaggctcatctggcttaaacagcttgggcatttttaagctagaagaagaatcagccatcttctgttctattcctcgtctcgtattagtagcaaatcgtttggccaaaattgtagctccaagttgttgggaaccacgagaaccactggctactaacggttgctcaggaccagcgtcatcaaaactttgctcattgtagttaccctcatcattaggatcttgattataataatagctctcttgtagagccaactcgtgttccatctttttcttcttataccttctccatgcagcctctataaaacaagcaccccatgttctccactgatgagaatagtacctaaatgcatgctgtagcttcatgctgtgaagacgtttaaattgaactgcaaaaaatttcaggtcttcagctcgaagtgcaaatgcttcaacttcagtaagtgttctcactgttcgagttgaagctggcaactgcgttgagttaggcagtaaggcccaagtcagcaattcttcaccacaaaaatcattaggtccaagggtgattgaattgaagaatccagatcttcccccatttgtcgtggagctctctagttgtcccctgatgataaagagcatctcactcactggatcatcttctagaacaacatatgtgcccattatgctcagggtcgacactaggcgttcacatattgcatcaagcaactggtcatccatttgctcaaaaaatggaacctgcgcagtcaggagattttggggtctctaaagcttagcaaacaaaagtggatgggtttaggcatttacagagtaaaaatacaactccaaacatgtggctgatgcaaatacaaaacgtaaggtacatcacaagacaagtcaaagcttaaattgatgactgaagagatggaactattttatttattcattcactaatacttattagtacttatttcttttgctcaaatctttaactactggcaaatatttctgcctgcagctcttttccttaatggttgcctccctgaagtatttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E02.1" temp_strand="+" temp_description="C02HBa0236E02.1  AC215430.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E02 sequenced_by:kribb upload_account_name:korea">
        <position start="126235" stop="128579"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="126534" g_stop="126792" g_length="259"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="259" r_length="259" r_score="0.946"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="126793" i_stop="127248" i_length="456">
            <donor d_prob="0.967" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="127249" g_stop="128279" g_length="1031"/>
          <reference_exon_boundary r_type="cDNA" r_start="260" r_stop="1290" r_length="1031" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E02.1" gen_strand="+" ref_id="SGN-U582911" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>1290</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E02.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U582911" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="126534" e_stop="126792"/>
          <exon e_start="127249" e_stop="128279"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAAAAAAAAGGAAAAGAGAGAGTACTAAATTAAGATGCAGTCCATTCTTTTGCACATAAACAGTAGTAAAGACGTAGTATAAATACTTGAAGTGCGAAGCTGAGAAATGATCCGTCGTGTATGAGTATTCATTGCTGGAGACGAGAAAATTAAATAGAGATGGAGAAGAAGAGATAAGAATCGGAGCAACGTCAAGAATTCAGATACAGAGTAATTTTTGGACAGAGACAGATTTGCTGCTGCTAAAAATGCAGAGGTAGTCTAACTACTTGCACGTCATCAATTAGCTGATTCATTAGATATAAGCTTATCCCTTTTCTTCTCTGTGTTCCATTCCACTATTCCTTTCCTGAACCCTATGAAAAAAATATTGCCTTCTTTTTTTTCTGTCCAATCAAAAACAATCTAATATGTACAGGTAAAACTTACCCACAATATGTTTGGCGTAAACATCCGGTACGGGTAAGTTTTTTCCAATATTACCTTTGGAACTAGATAACTTTTAGGCACAATCAACTAGAAAAGAAGGTTGTATTTCACATGATTGAAAAGGGAATAATGTTGTAATCAAAAAGGCCTATAGTTCCTGAAATTTACAAAAAAGTTTTAAAAAAAAGGGTACTAGCTTTGTCATTACTCACCAGTCACCAGTACCTTTCAGTAATGCAAGGTGTTCTAACTAATTACATATGATGTGGCCTTCATTCTGCAGAAAAATCAGGCTCATCTGGCTTAAACAGCTTGGGCATTTTTAAGCTAGAAGAAGAATCAGCCATCTTCTGTTCTATTCCTCTTCTCGTATTAGTAGCAAATCGTTTGGCCAAAATTGTAGCTCCAAGTTGTTGGGAACCACGAGAACCACTGGCTACTAACGGTTGCTCAGGACCAGCGTCATCAAAACTTTGCTCATTGTAGTTACCCTCATCATTAGGATCTTGATTATAATAATAGCTCTCTTGTAGAGCCAACTCGTATTCCATCTTTTTCTTCTTATACCTTCTCCATGCAGCCTGTATAAAACAAGCACCCCATGTTCTCCACTGATGAGAATAGTACCTAAATGCATGCTGTAGCTTCATGCTGTGAAGACGTTTAAATTGAACTGCAAAAAATTTCAGGTCTTCAGCTCGAAGTGCAAATGCTTCAACTTCAGTAAGTGTTCTCACTGTTCGAGTTGAAGCTGGCAACTGCGTTGAGTTAGGCAGTAAGGCCCAAGTCAGCAATTCTTCACCACAAAAATCATTAGGTCCAAGGGTGATTGAATTGAAGAATCCAGATCTTCCCCCATTTGTCGTGGAGCTCTCTAGTTGTCCCCTGATGATAAAGAGCATCTCACTCACTGGATCATCTTCTAGAACAACATATGTGCCCATTATGCTCAGGGTCGACACTAGGCGTTCACATATTGCATCAAGCAACTGGTCATCCATTTGCTCAAAAAATGGAACCTGCGCAGTCAGGAGATTTTGGGGTCTCTAAAGCTTAGCAAACAAAAGTGGATGGGTTTAGGCATTTACAGAGTAAAAATACAACTCCAAACATGTGGCTGATGCAAATACAAAACGTAAGGTACATCACAAGACAAGTCAAAGCTTAAATTGATGACTGAAGAGATGGAACTATTTTATTTATTCATTCACTAATACTTATTAGTACTTATTTCTTTTGCTCAAATCTTTAACTACTGGCAAATATTTCTGCCTGCAGCTCTTTTCCTTAATGTTTGCCTCCTGAAAGTATTTC</genome_strand>
        <mrna_strand>GAAAAAAAAAAAGGATAAGAGAGAGTACTAAATTAAGATGCGGTGCATTCTTTGGCACATAAACGGCAGTAAAGACGTGGTCTAAATACTTGAAGTGCGAAGCTGAGAAATGATCCGTCGAGTATGAGTATTCATTGCTGGAGACGAGAAAATTAAATAGAGATGGAGAAGAAGAGATGAGAATTGGAGCAGCGTCAAGAATTCATATACAGAGTAATTTTTGGACAGAGACAGATTTGCTGCTGCTAAAAATGCAGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAATCAGGCTCATCTGGCTTAAACAGCTTGGGCATTTTTAAGCTAGAAGAAGAATCAGCCATCTTCTGTTCTATTCCTCGTCTCGTATTAGTAGCAAATCGTTTGGCCAAAATTGTAGCTCCAAGTTGTTGGGAACCACGAGAACCACTGGCTACTAACGGTTGCTCAGGACCAGCGTCATCAAAACTTTGCTCATTGTAGTTACCCTCATCATTAGGATCTTGATTATAATAATAGCTCTCTTGTAGAGCCAACTCGTGTTCCATCTTTTTCTTCTTATACCTTCTCCATGCAGCCTCTATAAAACAAGCACCCCATGTTCTCCACTGATGAGAATAGTACCTAAATGCATGCTGTAGCTTCATGCTGTGAAGACGTTTAAATTGAACTGCAAAAAATTTCAGGTCTTCAGCTCGAAGTGCAAATGCTTCAACTTCAGTAAGTGTTCTCACTGTTCGAGTTGAAGCTGGCAACTGCGTTGAGTTAGGCAGTAAGGCCCAAGTCAGCAATTCTTCACCACAAAAATCATTAGGTCCAAGGGTGATTGAATTGAAGAATCCAGATCTTCCCCCATTTGTCGTGGAGCTCTCTAGTTGTCCCCTGATGATAAAGAGCATCTCACTCACTGGATCATCTTCTAGAACAACATATGTGCCCATTATGCTCAGGGTCGACACTAGGCGTTCACATATTGCATCAAGCAACTGGTCATCCATTTGCTCAAAAAATGGAACCTGCGCAGTCAGGAGATTTTGGGGTCTCTAAAGCTTAGCAAACAAAAGTGGATGGGTTTAGGCATTTACAGAGTAAAAATACAACTCCAAACATGTGGCTGATGCAAATACAAAACGTAAGGTACATCACAAGACAAGTCAAAGCTTAAATTGATGACTGAAGAGATGGAACTATTTTATTTATTCATTCACTAATACTTATTAGTACTTATTTCTTTTGCTCAAATCTTTAACTACTGGCAAATATTTCTGCCTGCAGCTCTTTTCCTTAATGGTTGCCTCCCTGAAGTATTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U566785" ref_strand="+" ref_description="SGN-U566785 Tomato 200607#2 [11 ESTs aligned] (*GB) gi|15241516|ref|NP_196991.1| (e_value=3e-58) cyclic nucleotide-regulated ion channel, putative (CNGC18) [Arabidopsis thaliana]; (*ATH) AT5G14870.1 (e_value=2e-60) | Symbol: None | cyclic nucleotide-regulated ion channel, putative (CNGC18), similar to cyclic nucleotide and calmodulin-regulated ion channel (cngc6) GI:4581207 from (Arabidopsis thaliana) | chr5:4808094-4810900 REVERSE | Aliases: T9L3.170, T9L3_170; (*SWP) sp|Q9LEQ3|CNG18_ARATH (e_value=2e-59) Putative cyclic nucleotide-gated ion channel 18 OS=Arabidopsis thaliana GN=CNGC18; ">
      <seq>acaattttcaatggcagtaaaggaagctttgatgaaaaaaggagcttcaatggaacactcttaattcattcttccttcttttctagcgctaattttcactcactgtttcattcataatacaaaaaaattattggaatctgttgtgttttccagaagagagacaatcttccggaatccgattttgatatcggactccgccatggaagatgactagaatatttgcaaagccggcgtctcacctccgtcatttacagcaatctttgaagaacaaatcattttcgaacgatgtgccatggtggcgccaaattctcgatccaaacagcgatatcgtcaatcgctggaactatgtcttcctccttacctgtctcatctctcttttcatcgatccactctacttctacgtacctttcgtcagcgatagagcttgtatgtccactgatgacgaagccgcccgtgaaattaccatctatcgttctctcaccgacatcttttacttccttcacattgccatgaagttccgcacagcttttgttgctcctagctctagggttttcggccggggtgagcttgttatggatccccgtgaaattgctatacgatatctcaaaactgatttcatcgttgattttacagctgctcttcccctgcctcaaattgttattcgctatgtaatcccagcagcaaaaagaaatggttcgggtcattccaaaagtacacttgcacttatcgttctcatacaatatgtgccaaggttattcgttattttcccattaaatcagcagattatcaaaact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0236E02-u8qcS/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0236E02.1" temp_strand="-" temp_description="C02HBa0236E02.1  AC215430.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0236E02 sequenced_by:kribb upload_account_name:korea">
        <position start="131776" stop="130640"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="131776" g_stop="131153" g_length="624"/>
          <reference_exon_boundary r_type="cDNA" r_start="30" r_stop="653" r_length="624" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="131152" i_stop="131081" i_length="72">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="131080" g_stop="130940" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="654" r_stop="794" r_length="141" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0236E02.1" gen_strand="-" ref_id="SGN-U566785" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>765</cumulative_length_of_scored_exons>
        <coverage percentage="0.963" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0236E02.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U566785" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="131776" e_stop="131153"/>
          <exon e_start="131080" e_stop="130940"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATGAAAAAAGGAGCTTCAATGGAACACTCTTAATTCATTCTTCCTTCTTTTCTAGCGCTAATTTTCACTCACTGTTTCATTCATAATACAAAAAAATTATTGGAATCTGTTGTGTTTTCCAGAAGAGAGACAATCTTCCGGAATCCGATTTTGATATCGGACTCCGCCATGGAAGATGACTAGAATATTTGCAAAGCCGGCGTCTCACCTCCGTCATTTACAGCAATCTTTGAAGAACAAATCATTTTCGAACGATGTGCCATGGTGGCGCCAAATTCTCGATCCAAACAGCGATATCGTCAATCGCTGGAACTATGTCTTCCTCCTTACCTGTCTCATCTCTCTTTTCATCGATCCACTCTACTTCTACGTACCTTTCGTCAGCGATAGAGCTTGTATGTCCACTGATGACGAAGCCGCCCGTGAAATTACCATCTATCGTTCTCTCACCGACATCTTTTACTTCCTTCACATTGCCATGAAGTTCCGCACAGCTTTTGTTGCTCCTAGCTCTAGGGTTTTCGGCCGGGGTGAGCTTGTTATGGATCCCCGTGAAATTGCTATACGATATCTCAAAACTGATTTCATCGTTGATTTTACAGCTGCTCTTCCCCTGCCTCAAGTCAGTACATATCCATTTAGTTTAATACTCTACTTTTATTATTGTTATTTTTAATTAATAGTGCCATTGCAGATTGTTATTCGCTATGTAATCCCAGCAGCCAAAAGAAATGGTTCGGGTCATTCCAAAAGTACACTTGCACTTATCGTTCTCATACAATATGTGCCAAGGTTATTCGTTATTTTCCCATTAAATCAGCAGATTATCAAAACT</genome_strand>
        <mrna_strand>TGATGAAAAAAGGAGCTTCAATGGAACACTCTTAATTCATTCTTCCTTCTTTTCTAGCGCTAATTTTCACTCACTGTTTCATTCATAATACAAAAAAATTATTGGAATCTGTTGTGTTTTCCAGAAGAGAGACAATCTTCCGGAATCCGATTTTGATATCGGACTCCGCCATGGAAGATGACTAGAATATTTGCAAAGCCGGCGTCTCACCTCCGTCATTTACAGCAATCTTTGAAGAACAAATCATTTTCGAACGATGTGCCATGGTGGCGCCAAATTCTCGATCCAAACAGCGATATCGTCAATCGCTGGAACTATGTCTTCCTCCTTACCTGTCTCATCTCTCTTTTCATCGATCCACTCTACTTCTACGTACCTTTCGTCAGCGATAGAGCTTGTATGTCCACTGATGACGAAGCCGCCCGTGAAATTACCATCTATCGTTCTCTCACCGACATCTTTTACTTCCTTCACATTGCCATGAAGTTCCGCACAGCTTTTGTTGCTCCTAGCTCTAGGGTTTTCGGCCGGGGTGAGCTTGTTATGGATCCCCGTGAAATTGCTATACGATATCTCAAAACTGATTTCATCGTTGATTTTACAGCTGCTCTTCCCCTGCCTCAA........................................................................ATTGTTATTCGCTATGTAATCCCAGCAGCAAAAAGAAATGGTTCGGGTCATTCCAAAAGTACACTTGCACTTATCGTTCTCATACAATATGTGCCAAGGTTATTCGTTATTTTCCCATTAAATCAGCAGATTATCAAAACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>36</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="6964" PGL_stop="8048"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="6964" e_stop="8048"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="6964" e_stop="8048" e_length="1085"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="6964" stop="8048"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U569184" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CCCTGTCATAAATAATTCTCTCTCCATTAATAGGATCATAACCTACAGAGACACTAAACGTGCACCAGAGCGTTTATGAAATTACAACTACTCACATGCAGGAAGACGAATTTTTTTCTCCGAGCTTTAGTAGCTACTCTTCAAATAGAGTGGCCGAGATTGCCGGAAAAATCTCCGATGAAATTAAGCGTGATTCTCAGGTGGTAGAAGAGAACGTTGACGGTGCCGATGGAGATGAAGATTTTGAATTCTCTTTGGTTTGTGAAAATCCAGAGGATTCGGTCGGCGTATTCCCCTTCGACCGTCCTATTTACCCCGTTTTCAACCGCGATCTGATACCAAACGATGTTTCTTATGGCGTAGATCGAGAAGGTGTTAACGGTGAATCGTCGGAAAACGTCAATAGTTCAGTTCAAGTTTCGTTAAAGGATTTATTCTTAGAAGAACGGGAACCGCTGTCGTCGTCATCTTCCGAGGTCGATGAGTTGGAGAGTGTACCTCCGGGAACGTATTGTGTATGGAAGCCGAATATAACCGAGCCTTCACCAAGCAGATGTAAGAAGAGTAATTCAACGGGATCGGCGTTTAAGCGGTGGAATATCCGAGATTTGATGCGCCGGAGCAACAGTGACGGTAAGGACAGTTTTTTATTTCTGACGCCGGAAAAAGGATTGAGAAATGAAACATCCAAAGCAAAGGACTCAGCGGAAGCGTCTAAAATTGCCGGAAAATTGAAGGCAAAGGGCAACAGTAGCAGCGGTAACAAAACATCTTCGATGACGGACGTTTATTTACGGAACCAAGCGGCAAAGGAAATGGATAAGAATAGGCGCAAATCATATTTACCATACCGGCGAGATCTGGTAGGTTTTTTCGCTAGTGCCAGCAATATTGGTAGAACTTTTCCTCCTTTTTAACAACCTTCCATTTTTTAATCAAGTGTTTGTAAATATCTAAATGAAAGAACATGTGCGATGATTCCTGAATGATTTAGTTGTTATGCTCCCATTTGTTTAAAGGATGATCATCCACCTCGATAATAATTTTCGATGAATTTTTCATATTATCTATGAATTAAATTTGAT</gDNA_template>
            <first_frame> P  C  H  K  *  F  S  L  H  *  *  D  H  N  L  Q  R  H  *  T  C  T  R  A  F  M  K  L  Q  L  L  T  C  R  K  T  N  F  F  L  R  A  L  V  A  T  L  Q  I  E  W  P  R  L  P  E  K  S  P  M  K  L  S  V  I  L  R  W  *  K  R  T  L  T  V  P  M  E  M  K  I  L  N  S  L  W  F  V  K  I  Q  R  I  R  S  A  Y  S  P  S  T  V  L  F  T  P  F  S  T  A  I  *  Y  Q  T  M  F  L  M  A  *  I  E  K  V  L  T  V  N  R  R  K  T  S  I  V  Q  F  K  F  R  *  R  I  Y  S  *  K  N  G  N  R  C  R  R  H  L  P  R  S  M  S  W  R  V  Y  L  R  E  R  I  V  Y  G  S  R  I  *  P  S  L  H  Q  A  D  V  R  R  V  I  Q  R  D  R  R  L  S  G  G  I  S  E  I  *  C  A  G  A  T  V  T  V  R  T  V  F  Y  F  *  R  R  K  K  D  *  E  M  K  H  P  K  Q  R  T  Q  R  K  R  L  K  L  P  E  N  *  R  Q  R  A  T  V  A  A  V  T  K  H  L  R  *  R  T  F  I  Y  G  T  K  R  Q  R  K  W  I  R  I  G  A  N  H  I  Y  H  T  G  E  I  W  *  V  F  S  L  V  P  A  I  L  V  E  L  F  L  L  F  N  N  L  P  F  F  N  Q  V  F  V  N  I  *  M  K  E  H  V  R  *  F  L  N  D  L  V  V  M  L  P  F  V  *  R  M  I  I  H  L  D  N  N  F  R  *  I  F  H  I  I  Y  E  L  N  L   </first_frame>
            <second_frame>  P  V  I  N  N  S  L  S  I  N  R  I  I  T  Y  R  D  T  K  R  A  P  E  R  L  *  N  Y  N  Y  S  H  A  G  R  R  I  F  F  S  E  L  *  *  L  L  F  K  *  S  G  R  D  C  R  K  N  L  R  *  N  *  A  *  F  S  G  G  R  R  E  R  *  R  C  R  W  R  *  R  F  *  I  L  F  G  L  *  K  S  R  G  F  G  R  R  I  P  L  R  P  S  Y  L  P  R  F  Q  P  R  S  D  T  K  R  C  F  L  W  R  R  S  R  R  C  *  R  *  I  V  G  K  R  Q  *  F  S  S  S  F  V  K  G  F  I  L  R  R  T  G  T  A  V  V  V  I  F  R  G  R  *  V  G  E  C  T  S  G  N  V  L  C  M  E  A  E  Y  N  R  A  F  T  K  Q  M  *  E  E  *  F  N  G  I  G  V  *  A  V  E  Y  P  R  F  D  A  P  E  Q  Q  *  R  *  G  Q  F  F  I  S  D  A  G  K  R  I  E  K  *  N  I  Q  S  K  G  L  S  G  S  V  *  N  C  R  K  I  E  G  K  G  Q  Q  *  Q  R  *  Q  N  I  F  D  D  G  R  L  F  T  E  P  S  G  K  G  N  G  *  E  *  A  Q  I  I  F  T  I  P  A  R  S  G  R  F  F  R  *  C  Q  Q  Y  W  *  N  F  S  S  F  L  T  T  F  H  F  L  I  K  C  L  *  I  S  K  *  K  N  M  C  D  D  S  *  M  I  *  L  L  C  S  H  L  F  K  G  *  S  S  T  S  I  I  I  F  D  E  F  F  I  L  S  M  N  *  I  *  </second_frame>
            <third_frame>   L  S  *  I  I  L  S  P  L  I  G  S  *  P  T  E  T  L  N  V  H  Q  S  V  Y  E  I  T  T  T  H  M  Q  E  D  E  F  F  S  P  S  F  S  S  Y  S  S  N  R  V  A  E  I  A  G  K  I  S  D  E  I  K  R  D  S  Q  V  V  E  E  N  V  D  G  A  D  G  D  E  D  F  E  F  S  L  V  C  E  N  P  E  D  S  V  G  V  F  P  F  D  R  P  I  Y  P  V  F  N  R  D  L  I  P  N  D  V  S  Y  G  V  D  R  E  G  V  N  G  E  S  S  E  N  V  N  S  S  V  Q  V  S  L  K  D  L  F  L  E  E  R  E  P  L  S  S  S  S  S  E  V  D  E  L  E  S  V  P  P  G  T  Y  C  V  W  K  P  N  I  T  E  P  S  P  S  R  C  K  K  S  N  S  T  G  S  A  F  K  R  W  N  I  R  D  L  M  R  R  S  N  S  D  G  K  D  S  F  L  F  L  T  P  E  K  G  L  R  N  E  T  S  K  A  K  D  S  A  E  A  S  K  I  A  G  K  L  K  A  K  G  N  S  S  S  G  N  K  T  S  S  M  T  D  V  Y  L  R  N  Q  A  A  K  E  M  D  K  N  R  R  K  S  Y  L  P  Y  R  R  D  L  V  G  F  F  A  S  A  S  N  I  G  R  T  F  P  P  F  *  Q  P  S  I  F  *  S  S  V  C  K  Y  L  N  E  R  T  C  A  M  I  P  E  *  F  S  C  Y  A  P  I  C  L  K  D  D  H  P  P  R  *  *  F  S  M  N  F  S  Y  Y  L  *  I  K  F  D </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E02.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="7005" stop="7880"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>873</number_coding_nucleotides>
                  <number_encoded_amino_acids>291</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PTETLNVHQSVYEITTTHMQEDEFFSPSFSSYSSNRVAEIAGKISDEIKRDSQVVEENVDGADGDEDFEFSLVCENPEDSVGVFPFDRPIYPVFNRDLIPNDVSYGVDREGVNGESSENVNSSVQVSLKDLFLEEREPLSSSSSEVDELESVPPGTYCVWKPNITEPSPSRCKKSNSTGSAFKRWNIRDLMRRSNSDGKDSFLFLTPEKGLRNETSKAKDSAEASKIAGKLKAKGNSSSGNKTSSMTDVYLRNQAAKEMDKNRRKSYLPYRRDLVGFFASASNIGRTFPPF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="14731" PGL_stop="18324"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="14731" e_stop="15182"/>
            <exon e_start="16380" e_stop="16441"/>
            <exon e_start="16814" e_stop="16957"/>
            <exon e_start="17056" e_stop="17104"/>
            <exon e_start="17189" e_stop="17305"/>
            <exon e_start="17391" e_stop="17530"/>
            <exon e_start="17608" e_stop="17713"/>
            <exon e_start="17794" e_stop="18324"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.971" e_score="0.998"/>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.961" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.979" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.948" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.997" e_score="1.000"/>
          <exon-only e_score="0.944"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="14731" e_stop="15182" e_length="452"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.971">
            <gDNA_intron_boundary i_start="15183" i_stop="16379" i_length="1197"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="16380" e_stop="16441" e_length="62"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="16442" i_stop="16813" i_length="372"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="16814" e_stop="16957" e_length="144"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="16958" i_stop="17055" i_length="98"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="17056" e_stop="17104" e_length="49"/>
          </exon>
          <intron i_serial="4" don_prob="1.000" acc_prob="0.961">
            <gDNA_intron_boundary i_start="17105" i_stop="17188" i_length="84"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="17189" e_stop="17305" e_length="117"/>
          </exon>
          <intron i_serial="5" don_prob="0.999" acc_prob="0.979">
            <gDNA_intron_boundary i_start="17306" i_stop="17390" i_length="85"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="17391" e_stop="17530" e_length="140"/>
          </exon>
          <intron i_serial="6" don_prob="0.999" acc_prob="0.948">
            <gDNA_intron_boundary i_start="17531" i_stop="17607" i_length="77"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="17608" e_stop="17713" e_length="106"/>
          </exon>
          <intron i_serial="7" don_prob="1.000" acc_prob="0.997">
            <gDNA_intron_boundary i_start="17714" i_stop="17793" i_length="80"/>
          </intron>
          <exon e_serial="8" e_score="0.944">
            <gDNA_exon_boundary e_start="17794" e_stop="18324" e_length="531"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14731" stop="15182"/>
              <exon start="16380" stop="16441"/>
              <exon start="16814" stop="16957"/>
              <exon start="17056" stop="17104"/>
              <exon start="17189" stop="17305"/>
              <exon start="17391" stop="17530"/>
              <exon start="17608" stop="17713"/>
              <exon start="17794" stop="18150"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U578484" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14935" stop="15118"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U591872" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17269" stop="17305"/>
              <exon start="17391" stop="17530"/>
              <exon start="17608" stop="17713"/>
              <exon start="17794" stop="18324"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U579509" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTTGAAATGTAAGGTTCTTGGCTTCTTAGCCATATGATATTAAGGCAAAAGTAAGATACAACATTGAATCTCCAACGTACAAACCTCATCTACAATGGATTGAAGCTCTCATTTGCTTAGCCATCACTTTCAACATTGTCTATTGGATTGGTTATATGTAAGAGTTCAAAAGCAGCAATAATCAAGAACACATCACTAGCTATACTATTACTAGTTAGTAACAAAGTAGTATAAAGGGCAAGCAAAAGCTAAAGGAAGCTCATTGAGAAATGTCAACTGCTTCCATTAACAATTGCCTTACTCTCTCCCCTGCTCAAGCTTCCCTTAAGAAACCTACTCGTCCCGTTGCCTTCGCAAGGCTTGGCAACTCTTCTTCTTCTTCTTCTATTCCAAGTCTCATCAGAAACGAGCCCGTCTTTGCTGCCCCTACTCCCATCATCAACCCCATTGTG : AGAGAAGAAATGGCAAAAGAATCCTACGATCAAGCCATTGCTGCACTCGAGAAACTCCTCAG : CGAGAAAGCAGAACTTGGACCAGTTGCTGCAGCAAGAGTTGACCAGATCACTGCTGAATTGAAATCAGCAGACGGCGGCAAGGCATTCGACCCTGTTGAGCACATGAAAGCTGGCTTTATTCATTTCAAGACTGAGAAATATGA : CACAAACCCAGCCTTATATGGTGAGCTAGCAAAGGGCCAGAGCCCTAAG : TTCATGGTTTTCGCGTGCTCTGACTCACGAGTCTGCCCATCCCATGTCCTCAACTTCCAACCTGGTGAGGCATTCATGGTTCGTAACATCGCCAACATGGTCCCTGCTTATGACAAG : GTCAGGTACTCTGGAGTAGGAGCAGCCATTGAATACGCCGTTCTTCATCTTAAGGTGGAGAACATCGTTGTCATTGGCCACAGTGCTTGTGGAGGTATCAAAGGTCTCATGTCACTACCTGAAGATGGTAGTGAATCAAC : TGCCTTTATTGAGGATTGGGTAAAAATTTGTTTACCTGCCAAGGCAAAGGTTCTGGCCGATCACGGAGGGAAAGAATTTGCACATCAATGCACAGCTTGTGAGAAG : GAAGCTGTGAACGTTTCACTTGGAAATCTGCTTACGTATCCATTCGTGAGAGAAGGATTGGTGAAGAAAACATTGGCATTGAAGGGAGGTTACTATGATTTCGTGAAGGGTGGATTTGAGCTGTGGGGACTTGAGTTCGGTCTTTCTCCTCCTCTTTCCGTATGAACTTAATTCAATTACCATTTGGCCCTCACAATTTCCTTCCTTTTTTTTTTTTTCGCCTGACAGTACTTTTGCTTCGCAAAATCAACTGTGTGTATGTTGTTTGTATGTATTATGTATGTATGAATCAAATATGGAAGAGCACTCGTTGTTATATTTCTGAAATAAATAAAATGGAGACTACTTTTTGTATAAATACGTTTGTGGTGGGCTTTGGTAGGTAAAAGATGTGGCCAGTATACTGCACTGGAAGCTCATGTAGAGACAGAGAGATCGTCAAGCAACAAGAGGATTCCCAGATTTAATCTGTTATTCTTGCTCATGTAGACCAAAAATTGGCCATAATAATCTACAAACACTCTTTTCGGC</gDNA_template>
            <first_frame> L  E  M  *  G  S  W  L  L  S  H  M  I  L  R  Q  K  *  D  T  T  L  N  L  Q  R  T  N  L  I  Y  N  G  L  K  L  S  F  A  *  P  S  L  S  T  L  S  I  G  L  V  I  C  K  S  S  K  A  A  I  I  K  N  T  S  L  A  I  L  L  L  V  S  N  K  V  V  *  R  A  S  K  S  *  R  K  L  I  E  K  C  Q  L  L  P  L  T  I  A  L  L  S  P  L  L  K  L  P  L  R  N  L  L  V  P  L  P  S  Q  G  L  A  T  L  L  L  L  L  L  F  Q  V  S  S  E  T  S  P  S  L  L  P  L  L  P  S  S  T  P  L  * :   E  K  K  W  Q  K  N  P  T  I  K  P  L  L  H  S  R  N  S  S   : A  R  K  Q  N  L  D  Q  L  L  Q  Q  E  L  T  R  S  L  L  N  *  N  Q  Q  T  A  A  R  H  S  T  L  L  S  T  *  K  L  A  L  F  I  S  R  L  R  N  M   : T  Q  T  Q  P  Y  M  V  S  *  Q  R  A  R  A  L  S :   S  W  F  S  R  A  L  T  H  E  S  A  H  P  M  S  S  T  S  N  L  V  R  H  S  W  F  V  T  S  P  T  W  S  L  L  M  T  R :   S  G  T  L  E  *  E  Q  P  L  N  T  P  F  F  I  L  R  W  R  T  S  L  S  L  A  T  V  L  V  E  V  S  K  V  S  C  H  Y  L  K  M  V  V  N  Q   : L  P  L  L  R  I  G  *  K  F  V  Y  L  P  R  Q  R  F  W  P  I  T  E  G  K  N  L  H  I  N  A  Q  L  V  R  R :   K  L  *  T  F  H  L  E  I  C  L  R  I  H  S  *  E  K  D  W  *  R  K  H  W  H  *  R  E  V  T  M  I  S  *  R  V  D  L  S  C  G  D  L  S  S  V  F  L  L  L  F  P  Y  E  L  N  S  I  T  I  W  P  S  Q  F  P  S  F  F  F  F  S  P  D  S  T  F  A  S  Q  N  Q  L  C  V  C  C  L  Y  V  L  C  M  Y  E  S  N  M  E  E  H  S  L  L  Y  F  *  N  K  *  N  G  D  Y  F  L  Y  K  Y  V  C  G  G  L  W  *  V  K  D  V  A  S  I  L  H  W  K  L  M  *  R  Q  R  D  R  Q  A  T  R  G  F  P  D  L  I  C  Y  S  C  S  C  R  P  K  I  G  H  N  N  L  Q  T  L  F  S   </first_frame>
            <second_frame>  L  K  C  K  V  L  G  F  L  A  I  *  Y  *  G  K  S  K  I  Q  H  *  I  S  N  V  Q  T  S  S  T  M  D  *  S  S  H  L  L  S  H  H  F  Q  H  C  L  L  D  W  L  Y  V  R  V  Q  K  Q  Q  *  S  R  T  H  H  *  L  Y  Y  Y  *  L  V  T  K  *  Y  K  G  Q  A  K  A  K  G  S  S  L  R  N  V  N  C  F  H  *  Q  L  P  Y  S  L  P  C  S  S  F  P  *  E  T  Y  S  S  R  C  L  R  K  A  W  Q  L  F  F  F  F  F  Y  S  K  S  H  Q  K  R  A  R  L  C  C  P  Y  S  H  H  Q  P  H  C   : E  R  R  N  G  K  R  I  L  R  S  S  H  C  C  T  R  E  T  P  Q  :  R  E  S  R  T  W  T  S  C  C  S  K  S  *  P  D  H  C  *  I  E  I  S  R  R  R  Q  G  I  R  P  C  *  A  H  E  S  W  L  Y  S  F  Q  D  *  E  I  *  :  H  K  P  S  L  I  W  *  A  S  K  G  P  E  P  *   : V  H  G  F  R  V  L  *  L  T  S  L  P  I  P  C  P  Q  L  P  T  W  *  G  I  H  G  S  *  H  R  Q  H  G  P  C  L  *  Q   : G  Q  V  L  W  S  R  S  S  H  *  I  R  R  S  S  S  *  G  G  E  H  R  C  H  W  P  Q  C  L  W  R  Y  Q  R  S  H  V  T  T  *  R  W  *  *  I  N  :  C  L  Y  *  G  L  G  K  N  L  F  T  C  Q  G  K  G  S  G  R  S  R  R  E  R  I  C  T  S  M  H  S  L  *  E   : G  S  C  E  R  F  T  W  K  S  A  Y  V  S  I  R  E  R  R  I  G  E  E  N  I  G  I  E  G  R  L  L  *  F  R  E  G  W  I  *  A  V  G  T  *  V  R  S  F  S  S  S  F  R  M  N  L  I  Q  L  P  F  G  P  H  N  F  L  P  F  F  F  F  R  L  T  V  L  L  L  R  K  I  N  C  V  Y  V  V  C  M  Y  Y  V  C  M  N  Q  I  W  K  S  T  R  C  Y  I  S  E  I  N  K  M  E  T  T  F  C  I  N  T  F  V  V  G  F  G  R  *  K  M  W  P  V  Y  C  T  G  S  S  C  R  D  R  E  I  V  K  Q  Q  E  D  S  Q  I  *  S  V  I  L  A  H  V  D  Q  K  L  A  I  I  I  Y  K  H  S  F  R  </second_frame>
            <third_frame>   *  N  V  R  F  L  A  S  *  P  Y  D  I  K  A  K  V  R  Y  N  I  E  S  P  T  Y  K  P  H  L  Q  W  I  E  A  L  I  C  L  A  I  T  F  N  I  V  Y  W  I  G  Y  M  *  E  F  K  S  S  N  N  Q  E  H  I  T  S  Y  T  I  T  S  *  *  Q  S  S  I  K  G  K  Q  K  L  K  E  A  H  *  E  M  S  T  A  S  I  N  N  C  L  T  L  S  P  A  Q  A  S  L  K  K  P  T  R  P  V  A  F  A  R  L  G  N  S  S  S  S  S  S  I  P  S  L  I  R  N  E  P  V  F  A  A  P  T  P  I  I  N  P  I  V  :  R  E  E  M  A  K  E  S  Y  D  Q  A  I  A  A  L  E  K  L  L  S :   E  K  A  E  L  G  P  V  A  A  A  R  V  D  Q  I  T  A  E  L  K  S  A  D  G  G  K  A  F  D  P  V  E  H  M  K  A  G  F  I  H  F  K  T  E  K  Y  D :   T  N  P  A  L  Y  G  E  L  A  K  G  Q  S  P  K  :  F  M  V  F  A  C  S  D  S  R  V  C  P  S  H  V  L  N  F  Q  P  G  E  A  F  M  V  R  N  I  A  N  M  V  P  A  Y  D  K  :  V  R  Y  S  G  V  G  A  A  I  E  Y  A  V  L  H  L  K  V  E  N  I  V  V  I  G  H  S  A  C  G  G  I  K  G  L  M  S  L  P  E  D  G  S  E  S  T :   A  F  I  E  D  W  V  K  I  C  L  P  A  K  A  K  V  L  A  D  H  G  G  K  E  F  A  H  Q  C  T  A  C  E  K  :  E  A  V  N  V  S  L  G  N  L  L  T  Y  P  F  V  R  E  G  L  V  K  K  T  L  A  L  K  G  G  Y  Y  D  F  V  K  G  G  F  E  L  W  G  L  E  F  G  L  S  P  P  L  S  V  *  T  *  F  N  Y  H  L  A  L  T  I  S  F  L  F  F  F  F  A  *  Q  Y  F  C  F  A  K  S  T  V  C  M  L  F  V  C  I  M  Y  V  *  I  K  Y  G  R  A  L  V  V  I  F  L  K  *  I  K  W  R  L  L  F  V  *  I  R  L  W  W  A  L  V  G  K  R  C  G  Q  Y  T  A  L  E  A  H  V  E  T  E  R  S  S  S  N  K  R  I  P  R  F  N  L  L  F  L  L  M  *  T  K  N  W  P  *  *  S  T  N  T  L  F  G </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E02.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="14997" stop="15182"/>
                    <exon start="16380" stop="16441"/>
                    <exon start="16814" stop="16957"/>
                    <exon start="17056" stop="17104"/>
                    <exon start="17189" stop="17305"/>
                    <exon start="17391" stop="17530"/>
                    <exon start="17608" stop="17713"/>
                    <exon start="17794" stop="17958"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>966</number_coding_nucleotides>
                  <number_encoded_amino_acids>322</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EMSTASINNCLTLSPAQASLKKPTRPVAFARLGNSSSSSSIPSLIRNEPVFAAPTPIINPIVREEMAKESYDQAIAALEKLLSEKAELGPVAAARVDQITAELKSADGGKAFDPVEHMKAGFIHFKTEKYDTNPALYGELAKGQSPKFMVFACSDSRVCPSHVLNFQPGEAFMVRNIANMVPAYDKVRYSGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSLPEDGSESTAFIEDWVKICLPAKAKVLADHGGKEFAHQCTACEKEAVNVSLGNLLTYPFVREGLVKKTLALKGGYYDFVKGGFELWGLEFGLSPPLSV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E02.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="17928" stop="18179"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>249</number_coding_nucleotides>
                  <number_encoded_amino_acids>83</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VRSFSSSFRMNLIQLPFGPHNFLPFFFFRLTVLLLRKINCVYVVCMYYVCMNQIWKSTRCYISEINKMETTFCINTFVVGFGR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="17686" e_stop="17713"/>
            <exon e_start="17794" e_stop="17952"/>
            <exon e_start="18176" e_stop="18257"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.997" e_score="0.964"/>
          <exon-intron don_prob="0.934" acc_prob="0.999" e_score="0.987"/>
          <exon-only e_score="0.976"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.964">
            <gDNA_exon_boundary e_start="17686" e_stop="17713" e_length="28"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.997">
            <gDNA_intron_boundary i_start="17714" i_stop="17793" i_length="80"/>
          </intron>
          <exon e_serial="2" e_score="0.987">
            <gDNA_exon_boundary e_start="17794" e_stop="17952" e_length="159"/>
          </exon>
          <intron i_serial="2" don_prob="0.934" acc_prob="0.999">
            <gDNA_intron_boundary i_start="17953" i_stop="18175" i_length="223"/>
          </intron>
          <exon e_serial="3" e_score="0.976">
            <gDNA_exon_boundary e_start="18176" e_stop="18257" e_length="82"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17686" stop="17713"/>
              <exon start="17794" stop="17952"/>
              <exon start="18176" stop="18257"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U592465" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGCACATCAATGCACAGCTTGTGAGAAG : GAAGCTGTGAACGTTTCACTTGGAAATCTGCTTACGTATCCATTCGTGAGAGAAGGATTGGTGAAGAAAACATTGGCATTGAAGGGAGGTTACTATGATTTCGTGAAGGGTGGATTTGAGCTGTGGGGACTTGAGTTCGGTCTTTCTCCTCCTCTTTCC : GTAAAAGATGTGGCCAGTATACTGCACTGGAAGCTCATGTAGAGACAGAGAGATCGTCAAGCAACAAGAGGATTCCCAGATT</gDNA_template>
            <first_frame> C  T  S  M  H  S  L  *  E   : G  S  C  E  R  F  T  W  K  S  A  Y  V  S  I  R  E  R  R  I  G  E  E  N  I  G  I  E  G  R  L  L  *  F  R  E  G  W  I  *  A  V  G  T  *  V  R  S  F  S  S  S  F   : R  K  R  C  G  Q  Y  T  A  L  E  A  H  V  E  T  E  R  S  S  S  N  K  R  I  P  R   </first_frame>
            <second_frame>  A  H  Q  C  T  A  C  E  K  :  E  A  V  N  V  S  L  G  N  L  L  T  Y  P  F  V  R  E  G  L  V  K  K  T  L  A  L  K  G  G  Y  Y  D  F  V  K  G  G  F  E  L  W  G  L  E  F  G  L  S  P  P  L  S  :  V  K  D  V  A  S  I  L  H  W  K  L  M  *  R  Q  R  D  R  Q  A  T  R  G  F  P  D  </second_frame>
            <third_frame>   H  I  N  A  Q  L  V  R  R :   K  L  *  T  F  H  L  E  I  C  L  R  I  H  S  *  E  K  D  W  *  R  K  H  W  H  *  R  E  V  T  M  I  S  *  R  V  D  L  S  C  G  D  L  S  S  V  F  L  L  L  F  P :   *  K  M  W  P  V  Y  C  T  G  S  S  C  R  D  R  E  I  V  K  Q  Q  E  D  S  Q  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E02.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="17687" stop="17713"/>
                    <exon start="17794" stop="17952"/>
                    <exon start="18176" stop="18217"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>225</number_coding_nucleotides>
                  <number_encoded_amino_acids>75</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AHQCTACEKEAVNVSLGNLLTYPFVREGLVKKTLALKGGYYDFVKGGFELWGLEFGLSPPLSVKDVASILHWKLM*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="20471" PGL_stop="24461"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="20471" e_stop="20904"/>
            <exon e_start="21088" e_stop="21210"/>
            <exon e_start="21518" e_stop="21555"/>
            <exon e_start="23034" e_stop="23062"/>
            <exon e_start="23245" e_stop="23397"/>
            <exon e_start="23598" e_stop="23686"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.964" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.463" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.999" e_score="0.966"/>
          <exon-intron don_prob="1.000" acc_prob="0.908" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="20471" e_stop="20904" e_length="434"/>
          </exon>
          <intron i_serial="1" don_prob="0.964" acc_prob="0.997">
            <gDNA_intron_boundary i_start="20905" i_stop="21087" i_length="183"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="21088" e_stop="21210" e_length="123"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.000">
            <gDNA_intron_boundary i_start="21211" i_stop="21517" i_length="307"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="21518" e_stop="21555" e_length="38"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.463">
            <gDNA_intron_boundary i_start="21556" i_stop="23033" i_length="1478"/>
          </intron>
          <exon e_serial="4" e_score="0.966">
            <gDNA_exon_boundary e_start="23034" e_stop="23062" e_length="29"/>
          </exon>
          <intron i_serial="4" don_prob="0.996" acc_prob="0.999">
            <gDNA_intron_boundary i_start="23063" i_stop="23244" i_length="182"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="23245" e_stop="23397" e_length="153"/>
          </exon>
          <intron i_serial="5" don_prob="1.000" acc_prob="0.908">
            <gDNA_intron_boundary i_start="23398" i_stop="23597" i_length="200"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="23598" e_stop="23686" e_length="89"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20471" stop="20904"/>
              <exon start="21088" stop="21210"/>
              <exon start="21518" stop="21555"/>
              <exon start="23034" stop="23062"/>
              <exon start="23245" stop="23397"/>
              <exon start="23598" stop="23686"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U563107" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGGTCTTCCTCTTTGCTCTCACCAGTTGTCTTCTTAACAATGGCTGCATCTTCACACTCCCTAGCTTCTTCTGCTTGCTTCTCCACAACTCCGGCACGGAAATTTTCCGGCTCAGATCGATTTCAACTTGCTAAGTCTTTACTCTGCCGGAAAATACCTGGTTTCTCCGGCAGTGTGGTCTGCGCTCGGCGTATTTGCTCTAACTATGCCTCTTCCGGTGACCAGTCCAACTACGGGAAGAAGCTTATGGATAGTATTTTTGTGGCATGCACTTCCGTTGCCTTGTCTTTCTCTCTCTATATAGCAGACGTTGACCCTGCCTCGGCTTTTGTAGTCACTTCACCCAGGAAATTGCAGACTGATGAACTTGCTACTGTTCGTCTCTTCCAAGAGAATACACCTTCCGTTGTGTATATTACTAATCTTGCTTCCAG : GCAGGATATGTTCACACTGGATGTATTTGAGGTGCCTCAAGGGTCTGGGTCAGGCTTCGTCTGGGATAAAAATGGAAATATTGTTACTAATTATCATGTGATTCGAGGTGCTTCTGATCTCAG : AGTGACTCTTGCTGATCAAACTACTTATGATGCAAAAG : GTGTTGGATTTTCAATTCCAGTTGATACT : GTCAGTGGCATTGTTGATCAGTTAGTGCAGTTTGGGAAAGTCACAAGGCCAATTTTGGGCATAAAGTTTGCACCTGATCAGTCCGTTGAGCAACTGGGAGTCACTGGAGTACTTGTCCTGGATGCTCCTCCAAATGGTCCTGCAGGCAAAGCA : GGTCTTCTACCTACTAAACGTGATTCCTACGGAAGACTTATTTTAGGTGATATAATCACATCTATAAATGGAAAGAAGGTCTCTAATGG</gDNA_template>
            <first_frame> G  S  S  S  L  L  S  P  V  V  F  L  T  M  A  A  S  S  H  S  L  A  S  S  A  C  F  S  T  T  P  A  R  K  F  S  G  S  D  R  F  Q  L  A  K  S  L  L  C  R  K  I  P  G  F  S  G  S  V  V  C  A  R  R  I  C  S  N  Y  A  S  S  G  D  Q  S  N  Y  G  K  K  L  M  D  S  I  F  V  A  C  T  S  V  A  L  S  F  S  L  Y  I  A  D  V  D  P  A  S  A  F  V  V  T  S  P  R  K  L  Q  T  D  E  L  A  T  V  R  L  F  Q  E  N  T  P  S  V  V  Y  I  T  N  L  A  S  R :   Q  D  M  F  T  L  D  V  F  E  V  P  Q  G  S  G  S  G  F  V  W  D  K  N  G  N  I  V  T  N  Y  H  V  I  R  G  A  S  D  L  R :   V  T  L  A  D  Q  T  T  Y  D  A  K   : G  V  G  F  S  I  P  V  D  T  :  V  S  G  I  V  D  Q  L  V  Q  F  G  K  V  T  R  P  I  L  G  I  K  F  A  P  D  Q  S  V  E  Q  L  G  V  T  G  V  L  V  L  D  A  P  P  N  G  P  A  G  K  A  :  G  L  L  P  T  K  R  D  S  Y  G  R  L  I  L  G  D  I  I  T  S  I  N  G  K  K  V  S  N   </first_frame>
            <second_frame>  G  L  P  L  C  S  H  Q  L  S  S  *  Q  W  L  H  L  H  T  P  *  L  L  L  L  A  S  P  Q  L  R  H  G  N  F  P  A  Q  I  D  F  N  L  L  S  L  Y  S  A  G  K  Y  L  V  S  P  A  V  W  S  A  L  G  V  F  A  L  T  M  P  L  P  V  T  S  P  T  T  G  R  S  L  W  I  V  F  L  W  H  A  L  P  L  P  C  L  S  L  S  I  *  Q  T  L  T  L  P  R  L  L  *  S  L  H  P  G  N  C  R  L  M  N  L  L  L  F  V  S  S  K  R  I  H  L  P  L  C  I  L  L  I  L  L  P   : G  R  I  C  S  H  W  M  Y  L  R  C  L  K  G  L  G  Q  A  S  S  G  I  K  M  E  I  L  L  L  I  I  M  *  F  E  V  L  L  I  S   : E  *  L  L  L  I  K  L  L  M  M  Q  K  :  V  L  D  F  Q  F  Q  L  I  L :   S  V  A  L  L  I  S  *  C  S  L  G  K  S  Q  G  Q  F  W  A  *  S  L  H  L  I  S  P  L  S  N  W  E  S  L  E  Y  L  S  W  M  L  L  Q  M  V  L  Q  A  K  Q :   V  F  Y  L  L  N  V  I  P  T  E  D  L  F  *  V  I  *  S  H  L  *  M  E  R  R  S  L  M  </second_frame>
            <third_frame>   V  F  L  F  A  L  T  S  C  L  L  N  N  G  C  I  F  T  L  P  S  F  F  C  L  L  L  H  N  S  G  T  E  I  F  R  L  R  S  I  S  T  C  *  V  F  T  L  P  E  N  T  W  F  L  R  Q  C  G  L  R  S  A  Y  L  L  *  L  C  L  F  R  *  P  V  Q  L  R  E  E  A  Y  G  *  Y  F  C  G  M  H  F  R  C  L  V  F  L  S  L  Y  S  R  R  *  P  C  L  G  F  C  S  H  F  T  Q  E  I  A  D  *  *  T  C  Y  C  S  S  L  P  R  E  Y  T  F  R  C  V  Y  Y  *  S  C  F  Q  :  A  G  Y  V  H  T  G  C  I  *  G  A  S  R  V  W  V  R  L  R  L  G  *  K  W  K  Y  C  Y  *  L  S  C  D  S  R  C  F  *  S  Q  :  S  D  S  C  *  S  N  Y  L  *  C  K  R :   C  W  I  F  N  S  S  *  Y   : C  Q  W  H  C  *  S  V  S  A  V  W  E  S  H  K  A  N  F  G  H  K  V  C  T  *  S  V  R  *  A  T  G  S  H  W  S  T  C  P  G  C  S  S  K  W  S  C  R  Q  S   : R  S  S  T  Y  *  T  *  F  L  R  K  T  Y  F  R  *  Y  N  H  I  Y  K  W  K  E  G  L  *  W </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E02.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="20471" stop="20904"/>
                    <exon start="21088" stop="21210"/>
                    <exon start="21518" stop="21555"/>
                    <exon start="23034" stop="23062"/>
                    <exon start="23245" stop="23397"/>
                    <exon start="23598" stop="23684"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>864</number_coding_nucleotides>
                  <number_encoded_amino_acids>288</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GSSSLLSPVVFLTMAASSHSLASSACFSTTPARKFSGSDRFQLAKSLLCRKIPGFSGSVVCARRICSNYASSGDQSNYGKKLMDSIFVACTSVALSFSLYIADVDPASAFVVTSPRKLQTDELATVRLFQENTPSVVYITNLASRQDMFTLDVFEVPQGSGSGFVWDKNGNIVTNYHVIRGASDLRVTLADQTTYDAKGVGFSIPVDTVSGIVDQLVQFGKVTRPILGIKFAPDQSVEQLGVTGVLVLDAPPNGPAGKAGLLPTKRDSYGRLILGDIITSINGKKVSN</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="20475" e_stop="20904"/>
            <exon e_start="21088" e_stop="21210"/>
            <exon e_start="21518" e_stop="21689"/>
            <exon e_start="22414" e_stop="22451"/>
            <exon e_start="22864" e_stop="23062"/>
            <exon e_start="23245" e_stop="23397"/>
            <exon e_start="23598" e_stop="23732"/>
            <exon e_start="24189" e_stop="24461"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.964" acc_prob="0.997" e_score="0.998"/>
          <exon-intron don_prob="0.997" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.928" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.968" acc_prob="0.886" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.908" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.995" e_score="1.000"/>
          <exon-only e_score="0.967"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="20475" e_stop="20904" e_length="430"/>
          </exon>
          <intron i_serial="1" don_prob="0.964" acc_prob="0.997">
            <gDNA_intron_boundary i_start="20905" i_stop="21087" i_length="183"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="21088" e_stop="21210" e_length="123"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.000">
            <gDNA_intron_boundary i_start="21211" i_stop="21517" i_length="307"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="21518" e_stop="21689" e_length="172"/>
          </exon>
          <intron i_serial="3" don_prob="0.928" acc_prob="0.991">
            <gDNA_intron_boundary i_start="21690" i_stop="22413" i_length="724"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="22414" e_stop="22451" e_length="38"/>
          </exon>
          <intron i_serial="4" don_prob="0.968" acc_prob="0.886">
            <gDNA_intron_boundary i_start="22452" i_stop="22863" i_length="412"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="22864" e_stop="23062" e_length="199"/>
          </exon>
          <intron i_serial="5" don_prob="0.996" acc_prob="0.999">
            <gDNA_intron_boundary i_start="23063" i_stop="23244" i_length="182"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="23245" e_stop="23397" e_length="153"/>
          </exon>
          <intron i_serial="6" don_prob="1.000" acc_prob="0.908">
            <gDNA_intron_boundary i_start="23398" i_stop="23597" i_length="200"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="23598" e_stop="23732" e_length="135"/>
          </exon>
          <intron i_serial="7" don_prob="0.999" acc_prob="0.995">
            <gDNA_intron_boundary i_start="23733" i_stop="24188" i_length="456"/>
          </intron>
          <exon e_serial="8" e_score="0.967">
            <gDNA_exon_boundary e_start="24189" e_stop="24461" e_length="273"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20475" stop="20904"/>
              <exon start="21088" stop="21210"/>
              <exon start="21518" stop="21689"/>
              <exon start="22414" stop="22451"/>
              <exon start="22864" stop="23062"/>
              <exon start="23245" stop="23397"/>
              <exon start="23598" stop="23732"/>
              <exon start="24189" stop="24461"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U563106" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTTCCTCTTTGCTCTCACCAGTTGTCTTCTTAACAATGGCTGCATCTTCACACTCCCTAGCTTCTTCTGCTTGCTTCTCCACAACTCCGGCACGGAAATTTTCCGGCTCAGATCGATTTCAACTTGCTAAGTCTTTACTCTGCCGGAAAATACCTGGTTTCTCCGGCAGTGTGGTCTGCGCTCGGCGTATTTGCTCTAACTATGCCTCTTCCGGTGACCAGTCCAACTACGGGAAGAAGCTTATGGATAGTATTTTTGTGGCATGCACTTCCGTTGCCTTGTCTTTCTCTCTCTATATAGCAGACGTTGACCCTGCCTCGGCTTTTGTAGTCACTTCACCCAGGAAATTGCAGACTGATGAACTTGCTACTGTTCGTCTCTTCCAAGAGAATACACCTTCCGTTGTGTATATTACTAATCTTGCTTCCAG : GCAGGATATGTTCACACTGGATGTATTTGAGGTGCCTCAAGGGTCTGGGTCAGGCTTCGTCTGGGATAAAAATGGAAATATTGTTACTAATTATCATGTGATTCGAGGTGCTTCTGATCTCAG : AGTGACTCTTGCTGATCAAACTACTTATGATGCAAAAGTTGTTGGATTTGACCAAGATAAAGATGTTGCTGTGTTGCATATTGATGCACCAAAAGACAAGTTGCGACCTATACCAATTGGCGTATCGGCAGACTTGCTCGTTGGTCAAAAAGTATTTGCTATTGGAAATCCA : TTTGGACTTGATCATACACTCACCACTGGTGTAATCAG : TGGGCTTAGGAGAGAAATCAATTCTGCGGCTACTGGCCGCCCAATCCAAGATGTTATTCAGACAGATGCAGCAATCAATCCTGGTAACAGTGGAGGGCCACTTCTAGATAGTTCTGGAAATCTTATTGGAATAAATACTGCTATATATTCTCCTTCCGGTGCATCATCAGGTGTTGGATTTTCAATTCCAGTTGATACT : GTCAGTGGCATTGTTGATCAGTTAGTGCAGTTTGGGAAAGTCACAAGGCCAATTTTGGGCATAAAGTTTGCACCTGATCAGTCCGTTGAGCAACTGGGAGTCACTGGAGTACTTGTCCTGGATGCTCCTCCAAATGGTCCTGCAGGCAAAGCA : GGTCTTCTACCTACTAAACGTGATTCCTACGGAAGACTTATTTTAGGTGATATAATCACATCTATAAATGGAAAGAAGGTCTCTAATGGCACCGACTTGTACAGAATTCTTGACCAATGCAAAGTTGGAGAAAAG : GTAATTGTGGAAGTGCTGCGTGGGGATCAGAAAGAGAAGATCCCTGTACTTCTGGAACCAAAGCCTGAAGAATCGTAGTTCCTCAAATGGATAGAGTATGTGTTGATATGCATTTCTTGGCGAACAAGCCCATATTATTAGTGCATCAATTGTTGAATGGTTGTGTATATACAAAACAACGCTTAAAACTAGGGTGCAAGCAATATAGTTGGGAGTCTAACACTGCTGCCTAAATATTTCTACTATATTAGATATCCTCAAATTGTATAATGT</gDNA_template>
            <first_frame> L  P  L  C  S  H  Q  L  S  S  *  Q  W  L  H  L  H  T  P  *  L  L  L  L  A  S  P  Q  L  R  H  G  N  F  P  A  Q  I  D  F  N  L  L  S  L  Y  S  A  G  K  Y  L  V  S  P  A  V  W  S  A  L  G  V  F  A  L  T  M  P  L  P  V  T  S  P  T  T  G  R  S  L  W  I  V  F  L  W  H  A  L  P  L  P  C  L  S  L  S  I  *  Q  T  L  T  L  P  R  L  L  *  S  L  H  P  G  N  C  R  L  M  N  L  L  L  F  V  S  S  K  R  I  H  L  P  L  C  I  L  L  I  L  L  P   : G  R  I  C  S  H  W  M  Y  L  R  C  L  K  G  L  G  Q  A  S  S  G  I  K  M  E  I  L  L  L  I  I  M  *  F  E  V  L  L  I  S   : E  *  L  L  L  I  K  L  L  M  M  Q  K  L  L  D  L  T  K  I  K  M  L  L  C  C  I  L  M  H  Q  K  T  S  C  D  L  Y  Q  L  A  Y  R  Q  T  C  S  L  V  K  K  Y  L  L  L  E  I  H :   L  D  L  I  I  H  S  P  L  V  *  S   : V  G  L  G  E  K  S  I  L  R  L  L  A  A  Q  S  K  M  L  F  R  Q  M  Q  Q  S  I  L  V  T  V  E  G  H  F  *  I  V  L  E  I  L  L  E  *  I  L  L  Y  I  L  L  P  V  H  H  Q  V  L  D  F  Q  F  Q  L  I  L :   S  V  A  L  L  I  S  *  C  S  L  G  K  S  Q  G  Q  F  W  A  *  S  L  H  L  I  S  P  L  S  N  W  E  S  L  E  Y  L  S  W  M  L  L  Q  M  V  L  Q  A  K  Q :   V  F  Y  L  L  N  V  I  P  T  E  D  L  F  *  V  I  *  S  H  L  *  M  E  R  R  S  L  M  A  P  T  C  T  E  F  L  T  N  A  K  L  E  K  R :   *  L  W  K  C  C  V  G  I  R  K  R  R  S  L  Y  F  W  N  Q  S  L  K  N  R  S  S  S  N  G  *  S  M  C  *  Y  A  F  L  G  E  Q  A  H  I  I  S  A  S  I  V  E  W  L  C  I  Y  K  T  T  L  K  T  R  V  Q  A  I  *  L  G  V  *  H  C  C  L  N  I  S  T  I  L  D  I  L  K  L  Y  N   </first_frame>
            <second_frame>  F  L  F  A  L  T  S  C  L  L  N  N  G  C  I  F  T  L  P  S  F  F  C  L  L  L  H  N  S  G  T  E  I  F  R  L  R  S  I  S  T  C  *  V  F  T  L  P  E  N  T  W  F  L  R  Q  C  G  L  R  S  A  Y  L  L  *  L  C  L  F  R  *  P  V  Q  L  R  E  E  A  Y  G  *  Y  F  C  G  M  H  F  R  C  L  V  F  L  S  L  Y  S  R  R  *  P  C  L  G  F  C  S  H  F  T  Q  E  I  A  D  *  *  T  C  Y  C  S  S  L  P  R  E  Y  T  F  R  C  V  Y  Y  *  S  C  F  Q  :  A  G  Y  V  H  T  G  C  I  *  G  A  S  R  V  W  V  R  L  R  L  G  *  K  W  K  Y  C  Y  *  L  S  C  D  S  R  C  F  *  S  Q  :  S  D  S  C  *  S  N  Y  L  *  C  K  S  C  W  I  *  P  R  *  R  C  C  C  V  A  Y  *  C  T  K  R  Q  V  A  T  Y  T  N  W  R  I  G  R  L  A  R  W  S  K  S  I  C  Y  W  K  S   : I  W  T  *  S  Y  T  H  H  W  C  N  Q  :  W  A  *  E  R  N  Q  F  C  G  Y  W  P  P  N  P  R  C  Y  S  D  R  C  S  N  Q  S  W  *  Q  W  R  A  T  S  R  *  F  W  K  S  Y  W  N  K  Y  C  Y  I  F  S  F  R  C  I  I  R  C  W  I  F  N  S  S  *  Y   : C  Q  W  H  C  *  S  V  S  A  V  W  E  S  H  K  A  N  F  G  H  K  V  C  T  *  S  V  R  *  A  T  G  S  H  W  S  T  C  P  G  C  S  S  K  W  S  C  R  Q  S   : R  S  S  T  Y  *  T  *  F  L  R  K  T  Y  F  R  *  Y  N  H  I  Y  K  W  K  E  G  L  *  W  H  R  L  V  Q  N  S  *  P  M  Q  S  W  R  K   : G  N  C  G  S  A  A  W  G  S  E  R  E  D  P  C  T  S  G  T  K  A  *  R  I  V  V  P  Q  M  D  R  V  C  V  D  M  H  F  L  A  N  K  P  I  L  L  V  H  Q  L  L  N  G  C  V  Y  T  K  Q  R  L  K  L  G  C  K  Q  Y  S  W  E  S  N  T  A  A  *  I  F  L  L  Y  *  I  S  S  N  C  I  M  </second_frame>
            <third_frame>   S  S  L  L  S  P  V  V  F  L  T  M  A  A  S  S  H  S  L  A  S  S  A  C  F  S  T  T  P  A  R  K  F  S  G  S  D  R  F  Q  L  A  K  S  L  L  C  R  K  I  P  G  F  S  G  S  V  V  C  A  R  R  I  C  S  N  Y  A  S  S  G  D  Q  S  N  Y  G  K  K  L  M  D  S  I  F  V  A  C  T  S  V  A  L  S  F  S  L  Y  I  A  D  V  D  P  A  S  A  F  V  V  T  S  P  R  K  L  Q  T  D  E  L  A  T  V  R  L  F  Q  E  N  T  P  S  V  V  Y  I  T  N  L  A  S  R :   Q  D  M  F  T  L  D  V  F  E  V  P  Q  G  S  G  S  G  F  V  W  D  K  N  G  N  I  V  T  N  Y  H  V  I  R  G  A  S  D  L  R :   V  T  L  A  D  Q  T  T  Y  D  A  K  V  V  G  F  D  Q  D  K  D  V  A  V  L  H  I  D  A  P  K  D  K  L  R  P  I  P  I  G  V  S  A  D  L  L  V  G  Q  K  V  F  A  I  G  N  P  :  F  G  L  D  H  T  L  T  T  G  V  I  S :   G  L  R  R  E  I  N  S  A  A  T  G  R  P  I  Q  D  V  I  Q  T  D  A  A  I  N  P  G  N  S  G  G  P  L  L  D  S  S  G  N  L  I  G  I  N  T  A  I  Y  S  P  S  G  A  S  S  G  V  G  F  S  I  P  V  D  T  :  V  S  G  I  V  D  Q  L  V  Q  F  G  K  V  T  R  P  I  L  G  I  K  F  A  P  D  Q  S  V  E  Q  L  G  V  T  G  V  L  V  L  D  A  P  P  N  G  P  A  G  K  A  :  G  L  L  P  T  K  R  D  S  Y  G  R  L  I  L  G  D  I  I  T  S  I  N  G  K  K  V  S  N  G  T  D  L  Y  R  I  L  D  Q  C  K  V  G  E  K  :  V  I  V  E  V  L  R  G  D  Q  K  E  K  I  P  V  L  L  E  P  K  P  E  E  S  *  F  L  K  W  I  E  Y  V  L  I  C  I  S  W  R  T  S  P  Y  Y  *  C  I  N  C  *  M  V  V  Y  I  Q  N  N  A  *  N  *  G  A  S  N  I  V  G  S  L  T  L  L  P  K  Y  F  Y  Y  I  R  Y  P  Q  I  V  *  C </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E02.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="20477" stop="20904"/>
                    <exon start="21088" stop="21210"/>
                    <exon start="21518" stop="21689"/>
                    <exon start="22414" stop="22451"/>
                    <exon start="22864" stop="23062"/>
                    <exon start="23245" stop="23397"/>
                    <exon start="23598" stop="23732"/>
                    <exon start="24189" stop="24266"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1323</number_coding_nucleotides>
                  <number_encoded_amino_acids>441</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SSLLSPVVFLTMAASSHSLASSACFSTTPARKFSGSDRFQLAKSLLCRKIPGFSGSVVCARRICSNYASSGDQSNYGKKLMDSIFVACTSVALSFSLYIADVDPASAFVVTSPRKLQTDELATVRLFQENTPSVVYITNLASRQDMFTLDVFEVPQGSGSGFVWDKNGNIVTNYHVIRGASDLRVTLADQTTYDAKVVGFDQDKDVAVLHIDAPKDKLRPIPIGVSADLLVGQKVFAIGNPFGLDHTLTTGVISGLRREINSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGNLIGINTAIYSPSGASSGVGFSIPVDTVSGIVDQLVQFGKVTRPILGIKFAPDQSVEQLGVTGVLVLDAPPNGPAGKAGLLPTKRDSYGRLILGDIITSINGKKVSNGTDLYRILDQCKVGEKVIVEVLRGDQKEKIPVLLEPKPEES*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="46989" PGL_stop="46226"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="46989" e_stop="46226"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="46989" e_stop="46226" e_length="764"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46989" stop="46226"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U571618" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CGAAAGTGGAAACCGCCAAAACTATCATTATCGCAGAGACCTCATCTTTCAACTTCCATTCATTATTCTATTTTCCGTTTCACTCCATTTTCATACACCCAATCCCATTTTTGTAGCAGCAGTGTTCTGTTTCTTCTTCATGGAATTGAATCATACCAAGCAGACTCTGCAAACGGCTATGGAGAATGAACAGCAGCATCTCTCCCTCTCTGAATCAGATTCTACTGATTCTGAACCTGAGAAAGCTATTACTTTCTCCTCCCCAGCTCGTTTTCATAGCGGCTCCGATTCTGATCATTCCACTAAGTTCCAAACAGATAAAGCTACTAATCCCTCTACCGTCAATGGCGATTCTACTAAGGCGCAATCTCAGCCGAGGTCATCAATTTCCTCCGATTCAGATGATTTTAGTAAGTGTGGAGAACATAAAGTTAGTAAGATTGATTCTACTACTGCTACTGTTAATAGAGATTCTACAGCTACTAAAGTATCTTCACCGCCGGTGGAATCTCCGCCGAGGTCGTCAATTTCCTCTGATCAAATTTCTCTTCCTCATGAGTCCTTAAATATGGAGGATACTAAGCCTTCTGCAGCTCCGACGGGGAGTCCGCCGGAAAAACCTCCAATACCGGAAGCGGTGGTGAAGAAGTTTATCAAGGAGGAGCCACTGGCTTTGGTGAAAGCGGATCTGTTTGTCGGAGATGGTACAGCTAGTATTAAGGAAGGTGAAGACAGCGGCAACCGTCGGCAGAGAGGAAAGCCAC</gDNA_template>
            <first_frame> R  K  W  K  P  P  K  L  S  L  S  Q  R  P  H  L  S  T  S  I  H  Y  S  I  F  R  F  T  P  F  S  Y  T  Q  S  H  F  C  S  S  S  V  L  F  L  L  H  G  I  E  S  Y  Q  A  D  S  A  N  G  Y  G  E  *  T  A  A  S  L  P  L  *  I  R  F  Y  *  F  *  T  *  E  S  Y  Y  F  L  L  P  S  S  F  S  *  R  L  R  F  *  S  F  H  *  V  P  N  R  *  S  Y  *  S  L  Y  R  Q  W  R  F  Y  *  G  A  I  S  A  E  V  I  N  F  L  R  F  R  *  F  *  *  V  W  R  T  *  S  *  *  D  *  F  Y  Y  C  Y  C  *  *  R  F  Y  S  Y  *  S  I  F  T  A  G  G  I  S  A  E  V  V  N  F  L  *  S  N  F  S  S  S  *  V  L  K  Y  G  G  Y  *  A  F  C  S  S  D  G  E  S  A  G  K  T  S  N  T  G  S  G  G  E  E  V  Y  Q  G  G  A  T  G  F  G  E  S  G  S  V  C  R  R  W  Y  S  *  Y  *  G  R  *  R  Q  R  Q  P  S  A  E  R  K  A   </first_frame>
            <second_frame>  E  S  G  N  R  Q  N  Y  H  Y  R  R  D  L  I  F  Q  L  P  F  I  I  L  F  S  V  S  L  H  F  H  T  P  N  P  I  F  V  A  A  V  F  C  F  F  F  M  E  L  N  H  T  K  Q  T  L  Q  T  A  M  E  N  E  Q  Q  H  L  S  L  S  E  S  D  S  T  D  S  E  P  E  K  A  I  T  F  S  S  P  A  R  F  H  S  G  S  D  S  D  H  S  T  K  F  Q  T  D  K  A  T  N  P  S  T  V  N  G  D  S  T  K  A  Q  S  Q  P  R  S  S  I  S  S  D  S  D  D  F  S  K  C  G  E  H  K  V  S  K  I  D  S  T  T  A  T  V  N  R  D  S  T  A  T  K  V  S  S  P  P  V  E  S  P  P  R  S  S  I  S  S  D  Q  I  S  L  P  H  E  S  L  N  M  E  D  T  K  P  S  A  A  P  T  G  S  P  P  E  K  P  P  I  P  E  A  V  V  K  K  F  I  K  E  E  P  L  A  L  V  K  A  D  L  F  V  G  D  G  T  A  S  I  K  E  G  E  D  S  G  N  R  R  Q  R  G  K  P  </second_frame>
            <third_frame>   K  V  E  T  A  K  T  I  I  I  A  E  T  S  S  F  N  F  H  S  L  F  Y  F  P  F  H  S  I  F  I  H  P  I  P  F  L  *  Q  Q  C  S  V  S  S  S  W  N  *  I  I  P  S  R  L  C  K  R  L  W  R  M  N  S  S  I  S  P  S  L  N  Q  I  L  L  I  L  N  L  R  K  L  L  L  S  P  P  Q  L  V  F  I  A  A  P  I  L  I  I  P  L  S  S  K  Q  I  K  L  L  I  P  L  P  S  M  A  I  L  L  R  R  N  L  S  R  G  H  Q  F  P  P  I  Q  M  I  L  V  S  V  E  N  I  K  L  V  R  L  I  L  L  L  L  L  L  I  E  I  L  Q  L  L  K  Y  L  H  R  R  W  N  L  R  R  G  R  Q  F  P  L  I  K  F  L  F  L  M  S  P  *  I  W  R  I  L  S  L  L  Q  L  R  R  G  V  R  R  K  N  L  Q  Y  R  K  R  W  *  R  S  L  S  R  R  S  H  W  L  W  *  K  R  I  C  L  S  E  M  V  Q  L  V  L  R  K  V  K  T  A  A  T  V  G  R  E  E  S  H </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E02.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="46988" stop="46227"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>762</number_coding_nucleotides>
                  <number_encoded_amino_acids>254</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ESGNRQNYHYRRDLIFQLPFIILFSVSLHFHTPNPIFVAAVFCFFFMELNHTKQTLQTAMENEQQHLSLSESDSTDSEPEKAITFSSPARFHSGSDSDHSTKFQTDKATNPSTVNGDSTKAQSQPRSSISSDSDDFSKCGEHKVSKIDSTTATVNRDSTATKVSSPPVESPPRSSISSDQISLPHESLNMEDTKPSAAPTGSPPEKPPIPEAVVKKFIKEEPLALVKADLFVGDGTASIKEGEDSGNRRQRGKP</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="59597" PGL_stop="47528"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="59597" e_stop="59417"/>
            <exon e_start="59313" e_stop="59227"/>
            <exon e_start="58045" e_stop="57940"/>
            <exon e_start="56815" e_stop="56780"/>
            <exon e_start="56140" e_stop="56058"/>
            <exon e_start="55976" e_stop="55923"/>
            <exon e_start="55437" e_stop="55386"/>
            <exon e_start="54758" e_stop="54694"/>
            <exon e_start="53378" e_stop="53322"/>
            <exon e_start="53171" e_stop="53099"/>
            <exon e_start="49927" e_stop="49841"/>
            <exon e_start="49754" e_stop="49574"/>
            <exon e_start="49014" e_stop="48881"/>
            <exon e_start="48132" e_stop="47528"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.960" acc_prob="0.965" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.593" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.894" acc_prob="0.975" e_score="1.000"/>
          <exon-intron don_prob="0.533" acc_prob="0.738" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.981" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.984" e_score="1.000"/>
          <exon-intron don_prob="0.496" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.962" e_score="1.000"/>
          <exon-intron don_prob="0.521" acc_prob="0.989" e_score="0.973"/>
          <exon-intron don_prob="0.992" acc_prob="0.919" e_score="1.000"/>
          <exon-intron don_prob="0.776" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.816" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="59597" e_stop="59417" e_length="181"/>
          </exon>
          <intron i_serial="1" don_prob="0.960" acc_prob="0.965">
            <gDNA_intron_boundary i_start="59416" i_stop="59314" i_length="103"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="59313" e_stop="59227" e_length="87"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.593">
            <gDNA_intron_boundary i_start="59226" i_stop="58046" i_length="1181"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="58045" e_stop="57940" e_length="106"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="57939" i_stop="56816" i_length="1124"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="56815" e_stop="56780" e_length="36"/>
          </exon>
          <intron i_serial="4" don_prob="0.894" acc_prob="0.975">
            <gDNA_intron_boundary i_start="56779" i_stop="56141" i_length="639"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="56140" e_stop="56058" e_length="83"/>
          </exon>
          <intron i_serial="5" don_prob="0.533" acc_prob="0.738">
            <gDNA_intron_boundary i_start="56057" i_stop="55977" i_length="81"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="55976" e_stop="55923" e_length="54"/>
          </exon>
          <intron i_serial="6" don_prob="0.993" acc_prob="0.981">
            <gDNA_intron_boundary i_start="55922" i_stop="55438" i_length="485"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="55437" e_stop="55386" e_length="52"/>
          </exon>
          <intron i_serial="7" don_prob="0.996" acc_prob="0.984">
            <gDNA_intron_boundary i_start="55385" i_stop="54759" i_length="627"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="54758" e_stop="54694" e_length="65"/>
          </exon>
          <intron i_serial="8" don_prob="0.496" acc_prob="0.987">
            <gDNA_intron_boundary i_start="54693" i_stop="53379" i_length="1315"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="53378" e_stop="53322" e_length="57"/>
          </exon>
          <intron i_serial="9" don_prob="0.999" acc_prob="0.962">
            <gDNA_intron_boundary i_start="53321" i_stop="53172" i_length="150"/>
          </intron>
          <exon e_serial="10" e_score="0.973">
            <gDNA_exon_boundary e_start="53171" e_stop="53099" e_length="73"/>
          </exon>
          <intron i_serial="10" don_prob="0.521" acc_prob="0.989">
            <gDNA_intron_boundary i_start="53098" i_stop="49928" i_length="3171"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="49927" e_stop="49841" e_length="87"/>
          </exon>
          <intron i_serial="11" don_prob="0.992" acc_prob="0.919">
            <gDNA_intron_boundary i_start="49840" i_stop="49755" i_length="86"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="49754" e_stop="49574" e_length="181"/>
          </exon>
          <intron i_serial="12" don_prob="0.776" acc_prob="0.985">
            <gDNA_intron_boundary i_start="49573" i_stop="49015" i_length="559"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="49014" e_stop="48881" e_length="134"/>
          </exon>
          <intron i_serial="13" don_prob="0.816" acc_prob="0.999">
            <gDNA_intron_boundary i_start="48880" i_stop="48133" i_length="748"/>
          </intron>
          <exon e_serial="14" e_score="1.000">
            <gDNA_exon_boundary e_start="48132" e_stop="47528" e_length="605"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59597" stop="59417"/>
              <exon start="59313" stop="59227"/>
              <exon start="58045" stop="57940"/>
              <exon start="56815" stop="56780"/>
              <exon start="56140" stop="56058"/>
              <exon start="55976" stop="55923"/>
              <exon start="55437" stop="55386"/>
              <exon start="54758" stop="54694"/>
              <exon start="53378" stop="53322"/>
              <exon start="53171" stop="53099"/>
              <exon start="49927" stop="49841"/>
              <exon start="49754" stop="49574"/>
              <exon start="49014" stop="48881"/>
              <exon start="48132" stop="47528"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U576956" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTAAACGAGCGTTGATTTGTCGCTGACGAAATTTACAGTCAAGAGTAGTAACCGGTTGTAGTGAAAAAATGGAGTCGAGGAAAGTGACGAAGACGCTGGAAGATCAATGGGTGGTGGAGCGTCGAGTCCGAGAGATATACGATTATTTCTACAGCATTTCCCCCAACTCTCCGTCCGACCT : CATAGAGATCGAACGTGACAAACACTTCGGTTATCTAAGCCAAGGTCTCAGAAAACTTGGTCCGTCGTTTTCCGTTTTGGATGCCAG : TCGACCATGGCTTTGCTACTGGACACTTCATTCAATCGCTTTGTTGGGAGAATCTATTGGTGGCAAACTGGAAAATGATGCAATTGACTTTCTGACCCGTTGCCAG : GATAAAGATGGTGGCTATGGAGGTGGACCTGGTCAG : ATGCCTCATCTTGCAACTACTTATGCTGCAGTCAATTCACTAATAACTTTGGGCAAACCTGAAGCTCTGTCATCAATTAATAG : AGAAAAGTTGTACACATTTTTGCTGCGAATGAAAGACGCAAGTGGTGGATTCAG : GATGCACGATGGTGGAGAAGTAGATGTTCGTGCCTGTTATACTGCCATTTCT : GTTGCAAATATATTAAACATTGTGGATGACGAGCTGATTCATGGTGTTGGAAATTACATCCTAAG : TTGTCAGACTTATGAAGGTGGAATTGCTGGCGAACCAGGTTCTGAAGCTCATGGTGG : GTATACTTTCTGTGGGTTGGCTGCAATGATTCTGATCAACGAAGTGAATCGATTGGACTTGCCAGGTTTAATT : GATTGGGTGGTATTTAGACAAGGGGTCGAAGGTGGATTTCAAGGCAGGACAAATAAATTAGTCGATGGCTGCTATTCCTTTTGGCAG : GGCGCGGTAGTGTTTCTTATACAAAGACTAAATTTGATAGTCCATGAACAACTAGGGCTGTCAAATGACCTCAGTACAGAAAGTGCTGATGATTCTTCAGAGTCAGAGTTATCTGATGAAGAAGAGCATTTGGAAGGGATATCCTCTCATGTTCAGGATACTTTCCCTCTTGGACAAGCAG : GTGCTTGTCAAGAAAATGCTTCTCATAGCCCAAAAATAGCAGATACTGGATATGAGTTTATCAACCGACCCATAGCTATGAGGCCTCTCTTTGACAGCATGTATCTGCAGCAATATGTTCTTCTTTGCTCTCAG : ATTGAAGTTGGTGGTTTCAGAGACAAACCTGGGAAGGGTAGAGACTACTACCATACCTGTTACTGTTTAAGTGGTCTTTCAATTGCTCAGTATAGCTGGACCGACGAAGCTGATTCTCCACCATTACCCAGGGATGTATTTGGTCCTTATTCCAAATGTCTGTTGGAACAGGTTCACCCACTCTTCAACGTAGTGTTGGATCGGTATTATGAAGCTCGCGAATACTTCTCAGGCTTGTGAGACTGTTTCACCACTTTCATTAGCACCAACTTTTTCAGAAACTTAGTTGCAATCCAGAAGTTAAAAGTGTCATTGGGTTCAAAAGAGTTGTGATCGTTTATGTACAATATCCTTGCATTTGTATACGTGATACAAGTTGAGAGAATAACGGGTACTTTCTGAACTTGCTGAACTAGCACTAAATTCGTCTCTGTTTAGTGAGGTCTGTAAACATCAATGTGAAATTGCGAGATATGCATGTAATAGTGGCTAAGATTTACAAATCTGGATACCGGTTATTAGTGATCAGAAATTTCATTCAATTTCCCAAACGGTCACCTAAGTTTAGGATATTGCTTTAAAATATTATTTATTTTTCATTTAAG</gDNA_template>
            <first_frame> V  N  E  R  *  F  V  A  D  E  I  Y  S  Q  E  *  *  P  V  V  V  K  K  W  S  R  G  K  *  R  R  R  W  K  I  N  G  W  W  S  V  E  S  E  R  Y  T  I  I  S  T  A  F  P  P  T  L  R  P  T   : S  *  R  S  N  V  T  N  T  S  V  I  *  A  K  V  S  E  N  L  V  R  R  F  P  F  W  M  P   : V  D  H  G  F  A  T  G  H  F  I  Q  S  L  C  W  E  N  L  L  V  A  N  W  K  M  M  Q  L  T  F  *  P  V  A  R :   I  K  M  V  A  M  E  V  D  L  V  R :   C  L  I  L  Q  L  L  M  L  Q  S  I  H  *  *  L  W  A  N  L  K  L  C  H  Q  L  I   : E  K  S  C  T  H  F  C  C  E  *  K  T  Q  V  V  D  S   : G  C  T  M  V  E  K  *  M  F  V  P  V  I  L  P  F  L :   L  Q  I  Y  *  T  L  W  M  T  S  *  F  M  V  L  E  I  T  S  *   : V  V  R  L  M  K  V  E  L  L  A  N  Q  V  L  K  L  M  V   : G  I  L  S  V  G  W  L  Q  *  F  *  S  T  K  *  I  D  W  T  C  Q  V  *  L :   I  G  W  Y  L  D  K  G  S  K  V  D  F  K  A  G  Q  I  N  *  S  M  A  A  I  P  F  G  R :   A  R  *  C  F  L  Y  K  D  *  I  *  *  S  M  N  N  *  G  C  Q  M  T  S  V  Q  K  V  L  M  I  L  Q  S  Q  S  Y  L  M  K  K  S  I  W  K  G  Y  P  L  M  F  R  I  L  S  L  L  D  K  Q  :  V  L  V  K  K  M  L  L  I  A  Q  K  *  Q  I  L  D  M  S  L  S  T  D  P  *  L  *  G  L  S  L  T  A  C  I  C  S  N  M  F  F  F  A  L  R :   L  K  L  V  V  S  E  T  N  L  G  R  V  E  T  T  T  I  P  V  T  V  *  V  V  F  Q  L  L  S  I  A  G  P  T  K  L  I  L  H  H  Y  P  G  M  Y  L  V  L  I  P  N  V  C  W  N  R  F  T  H  S  S  T  *  C  W  I  G  I  M  K  L  A  N  T  S  Q  A  C  E  T  V  S  P  L  S  L  A  P  T  F  S  E  T  *  L  Q  S  R  S  *  K  C  H  W  V  Q  K  S  C  D  R  L  C  T  I  S  L  H  L  Y  T  *  Y  K  L  R  E  *  R  V  L  S  E  L  A  E  L  A  L  N  S  S  L  F  S  E  V  C  K  H  Q  C  E  I  A  R  Y  A  C  N  S  G  *  D  L  Q  I  W  I  P  V  I  S  D  Q  K  F  H  S  I  S  Q  T  V  T  *  V  *  D  I  A  L  K  Y  Y  L  F  F  I  *  </first_frame>
            <second_frame>  *  T  S  V  D  L  S  L  T  K  F  T  V  K  S  S  N  R  L  *  *  K  N  G  V  E  E  S  D  E  D  A  G  R  S  M  G  G  G  A  S  S  P  R  D  I  R  L  F  L  Q  H  F  P  Q  L  S  V  R  P  :  H  R  D  R  T  *  Q  T  L  R  L  S  K  P  R  S  Q  K  T  W  S  V  V  F  R  F  G  C  Q  :  S  T  M  A  L  L  L  D  T  S  F  N  R  F  V  G  R  I  Y  W  W  Q  T  G  K  *  C  N  *  L  S  D  P  L  P   : G  *  R  W  W  L  W  R  W  T  W  S   : D  A  S  S  C  N  Y  L  C  C  S  Q  F  T  N  N  F  G  Q  T  *  S  S  V  I  N  *  *  :  R  K  V  V  H  I  F  A  A  N  E  R  R  K  W  W  I  Q  :  D  A  R  W  W  R  S  R  C  S  C  L  L  Y  C  H  F   : C  C  K  Y  I  K  H  C  G  *  R  A  D  S  W  C  W  K  L  H  P  K  :  L  S  D  L  *  R  W  N  C  W  R  T  R  F  *  S  S  W  W  :  V  Y  F  L  W  V  G  C  N  D  S  D  Q  R  S  E  S  I  G  L  A  R  F  N   : *  L  G  G  I  *  T  R  G  R  R  W  I  S  R  Q  D  K  *  I  S  R  W  L  L  F  L  L  A   : G  R  G  S  V  S  Y  T  K  T  K  F  D  S  P  *  T  T  R  A  V  K  *  P  Q  Y  R  K  C  *  *  F  F  R  V  R  V  I  *  *  R  R  A  F  G  R  D  I  L  S  C  S  G  Y  F  P  S  W  T  S  R :   C  L  S  R  K  C  F  S  *  P  K  N  S  R  Y  W  I  *  V  Y  Q  P  T  H  S  Y  E  A  S  L  *  Q  H  V  S  A  A  I  C  S  S  L  L  S   : D  *  S  W  W  F  Q  R  Q  T  W  E  G  *  R  L  L  P  Y  L  L  L  F  K  W  S  F  N  C  S  V  *  L  D  R  R  S  *  F  S  T  I  T  Q  G  C  I  W  S  L  F  Q  M  S  V  G  T  G  S  P  T  L  Q  R  S  V  G  S  V  L  *  S  S  R  I  L  L  R  L  V  R  L  F  H  H  F  H  *  H  Q  L  F  Q  K  L  S  C  N  P  E  V  K  S  V  I  G  F  K  R  V  V  I  V  Y  V  Q  Y  P  C  I  C  I  R  D  T  S  *  E  N  N  G  Y  F  L  N  L  L  N  *  H  *  I  R  L  C  L  V  R  S  V  N  I  N  V  K  L  R  D  M  H  V  I  V  A  K  I  Y  K  S  G  Y  R  L  L  V  I  R  N  F  I  Q  F  P  K  R  S  P  K  F  R  I  L  L  *  N  I  I  Y  F  S  F  K </second_frame>
            <third_frame>   K  R  A  L  I  C  R  *  R  N  L  Q  S  R  V  V  T  G  C  S  E  K  M  E  S  R  K  V  T  K  T  L  E  D  Q  W  V  V  E  R  R  V  R  E  I  Y  D  Y  F  Y  S  I  S  P  N  S  P  S  D  L :   I  E  I  E  R  D  K  H  F  G  Y  L  S  Q  G  L  R  K  L  G  P  S  F  S  V  L  D  A  S :   R  P  W  L  C  Y  W  T  L  H  S  I  A  L  L  G  E  S  I  G  G  K  L  E  N  D  A  I  D  F  L  T  R  C  Q  :  D  K  D  G  G  Y  G  G  G  P  G  Q  :  M  P  H  L  A  T  T  Y  A  A  V  N  S  L  I  T  L  G  K  P  E  A  L  S  S  I  N  R :   E  K  L  Y  T  F  L  L  R  M  K  D  A  S  G  G  F  R :   M  H  D  G  G  E  V  D  V  R  A  C  Y  T  A  I  S  :  V  A  N  I  L  N  I  V  D  D  E  L  I  H  G  V  G  N  Y  I  L  S :   C  Q  T  Y  E  G  G  I  A  G  E  P  G  S  E  A  H  G  G :   Y  T  F  C  G  L  A  A  M  I  L  I  N  E  V  N  R  L  D  L  P  G  L  I  :  D  W  V  V  F  R  Q  G  V  E  G  G  F  Q  G  R  T  N  K  L  V  D  G  C  Y  S  F  W  Q  :  G  A  V  V  F  L  I  Q  R  L  N  L  I  V  H  E  Q  L  G  L  S  N  D  L  S  T  E  S  A  D  D  S  S  E  S  E  L  S  D  E  E  E  H  L  E  G  I  S  S  H  V  Q  D  T  F  P  L  G  Q  A   : G  A  C  Q  E  N  A  S  H  S  P  K  I  A  D  T  G  Y  E  F  I  N  R  P  I  A  M  R  P  L  F  D  S  M  Y  L  Q  Q  Y  V  L  L  C  S  Q  :  I  E  V  G  G  F  R  D  K  P  G  K  G  R  D  Y  Y  H  T  C  Y  C  L  S  G  L  S  I  A  Q  Y  S  W  T  D  E  A  D  S  P  P  L  P  R  D  V  F  G  P  Y  S  K  C  L  L  E  Q  V  H  P  L  F  N  V  V  L  D  R  Y  Y  E  A  R  E  Y  F  S  G  L  *  D  C  F  T  T  F  I  S  T  N  F  F  R  N  L  V  A  I  Q  K  L  K  V  S  L  G  S  K  E  L  *  S  F  M  Y  N  I  L  A  F  V  Y  V  I  Q  V  E  R  I  T  G  T  F  *  T  C  *  T  S  T  K  F  V  S  V  *  *  G  L  *  T  S  M  *  N  C  E  I  C  M  *  *  W  L  R  F  T  N  L  D  T  G  Y  *  *  S  E  I  S  F  N  F  P  N  G  H  L  S  L  G  Y  C  F  K  I  L  F  I  F  H  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E02.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="59571" stop="59417"/>
                    <exon start="59313" stop="59227"/>
                    <exon start="58045" stop="57940"/>
                    <exon start="56815" stop="56780"/>
                    <exon start="56140" stop="56058"/>
                    <exon start="55976" stop="55923"/>
                    <exon start="55437" stop="55386"/>
                    <exon start="54758" stop="54694"/>
                    <exon start="53378" stop="53322"/>
                    <exon start="53171" stop="53099"/>
                    <exon start="49927" stop="49841"/>
                    <exon start="49754" stop="49574"/>
                    <exon start="49014" stop="48881"/>
                    <exon start="48132" stop="47893"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1407</number_coding_nucleotides>
                  <number_encoded_amino_acids>469</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RNLQSRVVTGCSEKMESRKVTKTLEDQWVVERRVREIYDYFYSISPNSPSDLIEIERDKHFGYLSQGLRKLGPSFSVLDASRPWLCYWTLHSIALLGESIGGKLENDAIDFLTRCQDKDGGYGGGPGQMPHLATTYAAVNSLITLGKPEALSSINREKLYTFLLRMKDASGGFRMHDGGEVDVRACYTAISVANILNIVDDELIHGVGNYILSCQTYEGGIAGEPGSEAHGGYTFCGLAAMILINEVNRLDLPGLIDWVVFRQGVEGGFQGRTNKLVDGCYSFWQGAVVFLIQRLNLIVHEQLGLSNDLSTESADDSSESELSDEEEHLEGISSHVQDTFPLGQAGACQENASHSPKIADTGYEFINRPIAMRPLFDSMYLQQYVLLCSQIEVGGFRDKPGKGRDYYHTCYCLSGLSIAQYSWTDEADSPPLPRDVFGPYSKCLLEQVHPLFNVVLDRYYEAREYFSGL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="65446" PGL_stop="73670"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="65446" e_stop="65689"/>
            <exon e_start="66850" e_stop="67021"/>
            <exon e_start="67765" e_stop="68305"/>
            <exon e_start="69047" e_stop="69171"/>
            <exon e_start="69407" e_stop="69519"/>
            <exon e_start="69631" e_stop="70041"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="0.992"/>
          <exon-intron don_prob="0.994" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.768" e_score="1.000"/>
          <exon-intron don_prob="0.983" acc_prob="0.964" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.989" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.992">
            <gDNA_exon_boundary e_start="65446" e_stop="65689" e_length="244"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="65690" i_stop="66849" i_length="1160"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="66850" e_stop="67021" e_length="172"/>
          </exon>
          <intron i_serial="2" don_prob="0.994" acc_prob="0.987">
            <gDNA_intron_boundary i_start="67022" i_stop="67764" i_length="743"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="67765" e_stop="68305" e_length="541"/>
          </exon>
          <intron i_serial="3" don_prob="0.995" acc_prob="0.768">
            <gDNA_intron_boundary i_start="68306" i_stop="69046" i_length="741"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="69047" e_stop="69171" e_length="125"/>
          </exon>
          <intron i_serial="4" don_prob="0.983" acc_prob="0.964">
            <gDNA_intron_boundary i_start="69172" i_stop="69406" i_length="235"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="69407" e_stop="69519" e_length="113"/>
          </exon>
          <intron i_serial="5" don_prob="1.000" acc_prob="0.989">
            <gDNA_intron_boundary i_start="69520" i_stop="69630" i_length="111"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="69631" e_stop="70041" e_length="411"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65446" stop="65689"/>
              <exon start="66850" stop="67021"/>
              <exon start="67765" stop="68305"/>
              <exon start="69047" stop="69171"/>
              <exon start="69407" stop="69519"/>
              <exon start="69631" stop="70041"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U579280" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65527" stop="65689"/>
              <exon start="66850" stop="67021"/>
              <exon start="67765" stop="68305"/>
              <exon start="69047" stop="69110"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U593744" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AATTGGAGTTGAAGCAGGTCGCTTCTAAGTACTGGGCCTTCGCCCTTTCCTATAAAAAGCCGTTACGTCTCTCCAGTAAGTCATCTCAGCCAACTGGAGTTTATTCTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAG : GCTTCCCCTGGCCCCAAAAAGATTGTGGGTGTTTTCTACAAAGCAAATGAATATGCTGAAATGAACCCCAACTTTTTGGGCTGTGCAGAAAATGCCTTGGGGATACGTGAATGGTTAGAGTCTAAAGGTCATCAGTACATAGTCACTCCTGACAAAGAAGGACCAGATTGTG : AGCTTGAGAAACACATTCCTGATCTCCATGTGTTGATTTCGACCCCTTTTCATCCTGCCTATGTCACGGCTGAAAGGATCAAGAAGGCAAAAAATCTACAACTTCTGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAA : AGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAG : GATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAG : TTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGTTGTGTCTAGATTTCTGTGTTAAATAAACTGGCAAGCCGTGTCTTCAATAAGCTGATAAAATTGGCTACTTTATGTTCTTCTAGAACTCTAATGCAGTTTTTCTCCGGGTTAGCTGTAACTTTTGTGATGGAAACATATGTCCTCTTCTGTGATGGAGGTCTATGTATGATCCTCCAGTGTCTTTCTTGAGTCTATAACTGAACTTCCTTGCTGTGGTAGTTGTACTGGTGTTCCTGGACATTTTATGTTTTAAAAAAAATTATCTTCTTGTTTGCTAGT</gDNA_template>
            <first_frame> N  W  S  *  S  R  S  L  L  S  T  G  P  S  P  F  P  I  K  S  R  Y  V  S  P  V  S  H  L  S  Q  L  E  F  I  L  L  S  V  F  S  K  Y  E  T  L  F  C  K  S  K  K  N  S  D  G  D  E  A  C  S  F  Y  S  S  S  C  Y  C  F  T  F  I  L  S  F  Y  Q  R  T  S   : G  F  P  W  P  Q  K  D  C  G  C  F  L  Q  S  K  *  I  C  *  N  E  P  Q  L  F  G  L  C  R  K  C  L  G  D  T  *  M  V  R  V  *  R  S  S  V  H  S  H  S  *  Q  R  R  T  R  L  * :   A  *  E  T  H  S  *  S  P  C  V  D  F  D  P  F  S  S  C  L  C  H  G  *  K  D  Q  E  G  K  K  S  T  T  S  A  D  S  W  N  W  I  R  S  C  *  S  E  S  C  C  C  C  W  I  D  S  S  R  G  H  W  K  Q  Y  C  L  S  C  G  R  *  T  D  A  N  L  N  S  C  P  K  F  L  T  W  T  S  S  G  Y  Q  W  G  V  E  C  C  C  N  C  A  Q  S  L  *  F  G  R  Q  D  C  W  N  C  W  C  R  T  Y  W  Q  T  F  T  P  A  I  E  A  I  *  L  *  S  T  L  P  *  P  S  *  D  G  F  *  A  R  E  S  N  W  S  K  V  *  G  R  S  R  *  D  A  L  E  M  *  H  S  G  H  Q  Y  A  S  Y  R  E  N  K  :  R  N  V  *  Q  G  K  N  C  K  V  E  E  G  S  S  N  C  K  Q  C  S  R  S  N  Y  G  H  S  S  S  C  *  C  L  *  Q  R  S  Y  C  R :   I  Q  W  R  C  L  V  P  T  T  S  S  Q  G  P  S  M  A  L  H  A  K  P  S  Y  D  S  S  H  F  W  D  Y  H  *  C  T   : V  E  V  C  S  W  N  K  G  Y  V  G  Q  V  L  Q  G  *  G  F  P  C  *  K  L  H  C  Q  G  W  G  I  G  T  S  V  S  L  N  Y  L  C  I  E  L  C  L  D  F  C  V  K  *  T  G  K  P  C  L  Q  *  A  D  K  I  G  Y  F  M  F  F  *  N  S  N  A  V  F  L  R  V  S  C  N  F  C  D  G  N  I  C  P  L  L  *  W  R  S  M  Y  D  P  P  V  S  F  L  S  L  *  L  N  F  L  A  V  V  V  V  L  V  F  L  D  I  L  C  F  K  K  N  Y  L  L  V  C  *  </first_frame>
            <second_frame>  I  G  V  E  A  G  R  F  *  V  L  G  L  R  P  F  L  *  K  A  V  T  S  L  Q  *  V  I  S  A  N  W  S  L  F  F  S  L  F  L  V  S  T  K  P  F  S  V  N  P  K  K  I  P  M  A  M  R  R  V  A  S  T  A  A  R  A  I  A  S  P  S  S  L  V  F  T  R  E  L  Q  :  A  S  P  G  P  K  K  I  V  G  V  F  Y  K  A  N  E  Y  A  E  M  N  P  N  F  L  G  C  A  E  N  A  L  G  I  R  E  W  L  E  S  K  G  H  Q  Y  I  V  T  P  D  K  E  G  P  D  C   : E  L  E  K  H  I  P  D  L  H  V  L  I  S  T  P  F  H  P  A  Y  V  T  A  E  R  I  K  K  A  K  N  L  Q  L  L  L  T  A  G  I  G  S  D  H  V  D  L  K  A  A  A  A  A  G  L  T  V  A  E  V  T  G  S  N  T  V  S  V  A  E  D  E  L  M  R  I  L  I  L  V  R  N  F  L  P  G  H  H  Q  V  I  N  G  E  W  N  V  A  A  I  A  H  R  A  Y  D  L  E  G  K  T  V  G  T  V  G  A  G  R  I  G  R  L  L  L  Q  R  L  K  P  F  N  C  N  L  L  Y  H  D  R  L  K  M  D  S  E  L  E  N  Q  I  G  A  K  F  E  E  D  L  D  K  M  L  S  K  C  D  I  V  V  I  N  T  P  L  T  E  K  T  K :   G  M  F  D  K  E  R  I  A  K  L  K  K  G  V  L  I  V  N  N  A  R  G  A  I  M  D  T  Q  A  V  V  D  A  C  N  S  G  H  I  A   : G  Y  S  G  D  V  W  Y  P  Q  P  A  P  K  D  H  L  W  R  Y  M  P  N  Q  A  M  T  P  H  I  S  G  T  T  I  D  A  Q  :  L  R  Y  A  A  G  T  K  D  M  L  D  R  Y  F  K  G  E  D  F  P  A  E  N  Y  I  V  K  D  G  E  L  A  P  Q  Y  R  *  I  I  Y  V  *  S  C  V  *  I  S  V  L  N  K  L  A  S  R  V  F  N  K  L  I  K  L  A  T  L  C  S  S  R  T  L  M  Q  F  F  S  G  L  A  V  T  F  V  M  E  T  Y  V  L  F  C  D  G  G  L  C  M  I  L  Q  C  L  S  *  V  Y  N  *  T  S  L  L  W  *  L  Y  W  C  S  W  T  F  Y  V  L  K  K  I  I  F  L  F  A  S </second_frame>
            <third_frame>   L  E  L  K  Q  V  A  S  K  Y  W  A  F  A  L  S  Y  K  K  P  L  R  L  S  S  K  S  S  Q  P  T  G  V  Y  S  S  L  C  F  *  *  V  R  N  P  F  L  *  I  Q  K  K  F  R  W  R  *  G  V  *  L  L  Q  Q  L  V  L  L  L  H  L  H  P  *  F  L  P  E  N  F  R :   L  P  L  A  P  K  R  L  W  V  F  S  T  K  Q  M  N  M  L  K  *  T  P  T  F  W  A  V  Q  K  M  P  W  G  Y  V  N  G  *  S  L  K  V  I  S  T  *  S  L  L  T  K  K  D  Q  I  V  :  S  L  R  N  T  F  L  I  S  M  C  *  F  R  P  L  F  I  L  P  M  S  R  L  K  G  S  R  R  Q  K  I  Y  N  F  C  *  Q  L  E  L  D  Q  I  M  L  I  *  K  L  L  L  L  L  D  *  Q  *  Q  R  S  L  E  A  I  L  S  Q  L  R  K  M  N  *  C  E  S  *  F  L  S  E  I  S  Y  L  D  I  I  R  L  S  M  G  S  G  M  L  L  Q  L  R  T  E  L  M  I  W  K  A  R  L  L  E  L  L  V  Q  D  V  L  A  D  F  Y  S  S  D  *  S  H  L  T  V  I  Y  F  T  M  T  V  L  R  W  I  L  S  *  R  I  K  L  E  Q  S  L  R  K  I  S  I  R  C  S  R  N  V  T  *  W  S  S  I  R  L  L  Q  R  K  Q   : K  E  C  L  T  R  K  E  L  Q  S  *  R  R  E  F  *  L  *  T  M  L  E  E  Q  L  W  T  L  K  Q  L  L  M  L  V  T  A  V  I  L  Q  :  D  T  V  E  M  F  G  T  H  N  Q  L  P  R  T  I  Y  G  V  T  C  Q  T  K  L  *  L  L  T  F  L  G  L  P  L  M  H  S :   *  G  M  Q  L  E  Q  R  I  C  W  T  G  T  S  R  V  R  I  S  L  L  K  I  T  L  S  R  M  G  N  W  H  L  S  I  A  K  L  F  M  Y  R  V  V  S  R  F  L  C  *  I  N  W  Q  A  V  S  S  I  S  *  *  N  W  L  L  Y  V  L  L  E  L  *  C  S  F  S  P  G  *  L  *  L  L  *  W  K  H  M  S  S  S  V  M  E  V  Y  V  *  S  S  S  V  F  L  E  S  I  T  E  L  P  C  C  G  S  C  T  G  V  P  G  H  F  M  F  *  K  K  L  S  S  C  L  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E02.1" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="65525" stop="65689"/>
                    <exon start="66850" stop="67021"/>
                    <exon start="67765" stop="68305"/>
                    <exon start="69047" stop="69171"/>
                    <exon start="69407" stop="69519"/>
                    <exon start="69631" stop="69744"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1227</number_coding_nucleotides>
                  <number_encoded_amino_acids>409</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VISANWSLFFSLFLVSTKPFSVNPKKIPMAMRRVASTAARAIASPSSLVFTRELQASPGPKKIVGVFYKANEYAEMNPNFLGCAENALGIREWLESKGHQYIVTPDKEGPDCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLQLLLTAGIGSDHVDLKAAAAAGLTVAEVTGSNTVSVAEDELMRILILVRNFLPGHHQVINGEWNVAAIAHRAYDLEGKTVGTVGAGRIGRLLLQRLKPFNCNLLYHDRLKMDSELENQIGAKFEEDLDKMLSKCDIVVINTPLTEKTKGMFDKERIAKLKKGVLIVNNARGAIMDTQAVVDACNSGHIAGYSGDVWYPQPAPKDHLWRYMPNQAMTPHISGTTIDAQLRYAAGTKDMLDRYFKGEDFPAENYIVKDGELAPQYR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="67870" e_stop="69171"/>
            <exon e_start="69407" e_stop="69519"/>
            <exon e_start="69631" e_stop="72073"/>
            <exon e_start="73418" e_stop="73670"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.983" acc_prob="0.964" e_score="0.987"/>
          <exon-intron don_prob="1.000" acc_prob="0.989" e_score="0.991"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.995"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.987">
            <gDNA_exon_boundary e_start="67870" e_stop="69171" e_length="1302"/>
          </exon>
          <intron i_serial="1" don_prob="0.983" acc_prob="0.964">
            <gDNA_intron_boundary i_start="69172" i_stop="69406" i_length="235"/>
          </intron>
          <exon e_serial="2" e_score="0.991">
            <gDNA_exon_boundary e_start="69407" e_stop="69519" e_length="113"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.989">
            <gDNA_intron_boundary i_start="69520" i_stop="69630" i_length="111"/>
          </intron>
          <exon e_serial="3" e_score="0.995">
            <gDNA_exon_boundary e_start="69631" e_stop="72073" e_length="2443"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="72074" i_stop="73417" i_length="1344"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="73418" e_stop="73670" e_length="253"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67870" stop="69171"/>
              <exon start="69407" stop="69519"/>
              <exon start="69631" stop="72073"/>
              <exon start="73418" stop="73670"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U579029" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGCTGACAGCTGGAATTGGATCAGATCATGTTGATCTGAAAGCTGCTGCTGCTGCTGGATTGACAGTAGCAGAGGTCACTGGAAGCAATACTGTCTCAGTTGCGGAAGATGAACTGATGCGAATCTTAATTCTTGTCCGAAATTTCTTACCTGGACATCATCAGGTTATCAATGGGGAGTGGAATGTTGCTGCAATTGCGCACAGAGCTTATGATTTGGAAGGCAAGACTGTTGGAACTGTTGGTGCAGGACGTATTGGCAGACTTTTACTCCAGCGATTGAAGCCATTTAACTGTAATCTACTTTACCATGACCGTCTTAAGATGGATTCTGAGCTAGAGAATCAAATTGGAGCAAAGTTTGAGGAAGATCTCGATAAGATGCTCTCGAAATGTGACATAGTGGTCATCAATACGCCTCTTACAGAGAAAACAAAGTAAGGTTTCTGTTTCTGTAATTACCCGTCGTAAACCTATACAATAATATTTATTGACAAAGCTTCTTATATTCAAGTTATTTTAACAATGACTTAATTATGAAATGAACTAAGTAAGCTAAAGTGAATATTCATTGAGAATGAAATATGATATTTAGCGAAGGGAAGGAGAATCTTTGGTGTCATCGTAATTTTTTGGTATCACTCTAGATCATATATAAAGTAGTTGTATATTTAGATTCCCCGATTGTATTCCCTAAGTTAAGAAATTCTCTTGAGCATCCACCATATACTATGATACATGACTTTGGCTAAGCTCAAAAAGACTATCTCAATGATGGCCCTCCATGGATTCTCCACCTATATAAGCCACGGCTAAAGAAAAATTGCTTGGCCAAGTTGTCTTTTACCTTTGGCATGATGCAAAAAACATTTGATATTCTTTCTGTGTGAACCACTGCTACGAGTAATATGTTCTTAGAGATCATGTTTTCTTTTTGTTCTTCCTTTAATTTTCTATTTGAAGATTTGTCATCAGTTAGAGGTCATCGGTAGGATGATAGATGTTCTCAGCAACTTGTGTTGCCAGAATAATATGATTGCCAATGGAGTATTTTTAAGATTCTTGGAGATGTAAGAGTTGTTTCTGTCCATACATCACTCTTCTCATGTCACTAAGGTCATTGATTGTTTCCATGTGCTATATCGCAAATTGCTCACAATTTTAACTATGTGATCCAGAGGAATGTTTGACAAGGAAAGAATTGCAAAGTTGAAGAAGGGAGTTCTAATTGTAAACAATGCTCGAGGAGCAATTATGGACACTCAAGCAGTTGTTGATGCTTGTAACAGCGGTCATATTGCAG : GATACAGTGGAGATGTTTGGTACCCACAACCAGCTCCCAAGGACCATCTATGGCGTTACATGCCAAACCAAGCTATGACTCCTCACATTTCTGGGACTACCATTGATGCACAG : TTGAGGTATGCAGCTGGAACAAAGGATATGTTGGACAGGTACTTCAAGGGTGAGGATTTCCCTGCTGAAAATTACATTGTCAAGGATGGGGAATTGGCACCTCAGTATCGCTAAATTATTTATGTATAGAGTTGTGTCTAGATTTCTGTGTTAAATAAACTGGCAAGCCGTGTCTTCAATAAGCTGATAAAATTGGCTACTTTATGTTCTTCTAGAACTCTAATGCAGTTTTTCTCCGGGTTAGCTGTAACTTTTGTGATGGAAACATATGTCCTCTTCTGTGATGGAGGTCTATGTATGATCCTCCAGTGTCTTTCTTGAGTCTATAACTGAACTTCCTTGCTGTGGTAGTTGTACTGGTGTTCCTGGACATTTTATGTTTTAAAAAAAATTATCTTCTTGTTTGCTAGTATTTGTTGCAGTCGCTAGGTTAATCTTTTCTACGACGCCAGGAAAAACTTGGCAAAAATAATGAAATGATGTGAAACAGAATTTGACATCACAGTATATTTTGCTTTATTGGGAAGAAAAGCCGACTTCATCAGTCTGGAACTTCAGATTTTTAAACGACCTCTTTCTTCACATACAAGCGAATAAATGCGATATATGCGCCATTTGACACCCAAGTTGGAGTGGTTCATTTTACAGTTACGCTTTTTTGTCTATAATAAAAAAGTCAATTAGTATATAACATGTTTGAATTAGATCTTAAATCTAATTCACACTCCAAAAGCTAGTTCTAGTTCAAAAGGAGGAATTTTCAAGCCTTAATAAGGAGTTTACTCATTTTCGACGTGAGACTGTCGTCATTAACATTACAGTTATAGTAATAGGTAATTTTTGAATACAAATCAGAGCCACTATATCTTTCAAGTGCAAGTAGAAAATGCAGACTGATCACAAAAGAAAGAGAGCAGGCAGCATACACATGCAATGTTTTTTAATTAGTTGGCGACATTGTGCGAAGAAGATTTGTCATTCATGACATGTGGCTGTGATTTCCTATACCGAATGTTTGTGGGATAATCTTCCTGTTGGTGTTAGTCACCAGTACCTAAAATTTACTTTAAAAATGATGATAAATTTCATGCCTCACTGATTCAAACTGTTTTGCTTAAGAAATTCAAGGTCTTTCATTTGCATCTGAACTGCTTCTTTTGATAATTGCTTGGGCTCATATTTGATTTCTTCAGTTCCATCTGCCATTCTCTTTGCCTTCTCTTTGACAATGATTTCTACCTTTTGCCGCCCGACTGTAGGAAAGACAGCATTAAGCATGGTACTTAGCAGTTTTTCATCTTCTTCATCAATCAGATCCCTTCCATAGCAACACACATGTATAGCTTCAAGAGCTTTCTCAGCACGAAATTCCATGGGGATTGTAGGTGCTGGAGCTCCCAACTTTGATCGCTTCTGCACGAGTAAAGGAAAATGTTAGCAAAAATGGTACTGGGTATAACACTGGACCATAAACGAGAGTTCAAATATAAGTGTGATATATGGCTATCAAACCGTGCACATTCTGTGCTTGGTGCTAAATCTAATGAAGCCCGTAATGGGATAGCTGCAAACATAAATTTACTCGATATACTATTGTAAGCAAGCTTCCCAATAAGAGTTAGGCAGAGCTATGCTGCTTGAATCGTCCAAGAATACTGTCTGCATGTGTCGATACTCTAAAATATATGCAGTTTTGGAGGATTCGAACAACATGGAGGCAGAGTTCTAAGTACCACATCAAAAGAATGAAGCATAAACAGAAGTTGAAGTATGCCTCAAAGACAGTATCCGAGTAAGTATGCTATAAATTTACTGATAAGCATTGAAAGTAAGGTAACATAAATGAAAAGAAGCTAAAAATCGTTGGCAAATGAAATCTTACGAACCTCCCTTGCTTCATTCATCATTGCGATGAAGTTTTGTTCTTCAAATTCAATATCATTTGCTAAACTAAGCCTTGCTACCCCTTCCAAAATTTCCTCAGATTTGAGTAAACCAGCTCCTACTGCAGCTAACCAACAACACAGTAGCACATACAGAGGATCCCCTGTCTATCAATAAGGCAAGGAAAATCAAGGTCAATAATCTATAGATAAAACCAAGTCACTTGATTGCAAGTAAAAATTACCTTGCCACGTCGATCTCGAAATTCATAAAAAGCTCTTGAATCATTAATGGAACACTTGTTACCGACTCGCCTCCTGAACTCCGCAAAATCAATAAAATCGCCTCCAACACCACCTTCCTCATTGACAATTCTGGCTATGAGACCAAAAACAGGCAGTGAACCGATGACCTTATTAGCAAAACTAGAAATTGGATTTGTGGTCTCATCCATATAAGCCTTGACGAGCAAGACCGCACCGCCATTGGAGTTGGAATTATTTCTTCTGGATGGAAATGTATAGAAACGTCGAAAGTAACGAAGAGAGGGAGAGATTGA : GTTACAGTAGATGGAGGAGGAAGAAGAAGGAGAGTGGAGAGAGGAGACAACCACCATAGTGTTACATGTGGTGGACGTTCAATCTTTGTTTTGATATTTGCCCCTTTTGTTTATCTTTTCGGAATCTATCTCGCTATGAGCTTCATTATCTAACTCTCAAATAATAATAATATTAGTAATACAGTTAAAAAAATTAAAATCATCTACTTTTTCGTAGCCCTTTTGATTAAATTAAATTTATTTAAATACTTAA</gDNA_template>
            <first_frame> C  *  Q  L  E  L  D  Q  I  M  L  I  *  K  L  L  L  L  L  D  *  Q  *  Q  R  S  L  E  A  I  L  S  Q  L  R  K  M  N  *  C  E  S  *  F  L  S  E  I  S  Y  L  D  I  I  R  L  S  M  G  S  G  M  L  L  Q  L  R  T  E  L  M  I  W  K  A  R  L  L  E  L  L  V  Q  D  V  L  A  D  F  Y  S  S  D  *  S  H  L  T  V  I  Y  F  T  M  T  V  L  R  W  I  L  S  *  R  I  K  L  E  Q  S  L  R  K  I  S  I  R  C  S  R  N  V  T  *  W  S  S  I  R  L  L  Q  R  K  Q  S  K  V  S  V  S  V  I  T  R  R  K  P  I  Q  *  Y  L  L  T  K  L  L  I  F  K  L  F  *  Q  *  L  N  Y  E  M  N  *  V  S  *  S  E  Y  S  L  R  M  K  Y  D  I  *  R  R  E  G  E  S  L  V  S  S  *  F  F  G  I  T  L  D  H  I  *  S  S  C  I  F  R  F  P  D  C  I  P  *  V  K  K  F  S  *  A  S  T  I  Y  Y  D  T  *  L  W  L  S  S  K  R  L  S  Q  *  W  P  S  M  D  S  P  P  I  *  A  T  A  K  E  K  L  L  G  Q  V  V  F  Y  L  W  H  D  A  K  N  I  *  Y  S  F  C  V  N  H  C  Y  E  *  Y  V  L  R  D  H  V  F  F  L  F  F  L  *  F  S  I  *  R  F  V  I  S  *  R  S  S  V  G  *  *  M  F  S  A  T  C  V  A  R  I  I  *  L  P  M  E  Y  F  *  D  S  W  R  C  K  S  C  F  C  P  Y  I  T  L  L  M  S  L  R  S  L  I  V  S  M  C  Y  I  A  N  C  S  Q  F  *  L  C  D  P  E  E  C  L  T  R  K  E  L  Q  S  *  R  R  E  F  *  L  *  T  M  L  E  E  Q  L  W  T  L  K  Q  L  L  M  L  V  T  A  V  I  L  Q  :  D  T  V  E  M  F  G  T  H  N  Q  L  P  R  T  I  Y  G  V  T  C  Q  T  K  L  *  L  L  T  F  L  G  L  P  L  M  H  S :   *  G  M  Q  L  E  Q  R  I  C  W  T  G  T  S  R  V  R  I  S  L  L  K  I  T  L  S  R  M  G  N  W  H  L  S  I  A  K  L  F  M  Y  R  V  V  S  R  F  L  C  *  I  N  W  Q  A  V  S  S  I  S  *  *  N  W  L  L  Y  V  L  L  E  L  *  C  S  F  S  P  G  *  L  *  L  L  *  W  K  H  M  S  S  S  V  M  E  V  Y  V  *  S  S  S  V  F  L  E  S  I  T  E  L  P  C  C  G  S  C  T  G  V  P  G  H  F  M  F  *  K  K  L  S  S  C  L  L  V  F  V  A  V  A  R  L  I  F  S  T  T  P  G  K  T  W  Q  K  *  *  N  D  V  K  Q  N  L  T  S  Q  Y  I  L  L  Y  W  E  E  K  P  T  S  S  V  W  N  F  R  F  L  N  D  L  F  L  H  I  Q  A  N  K  C  D  I  C  A  I  *  H  P  S  W  S  G  S  F  Y  S  Y  A  F  L  S  I  I  K  K  S  I  S  I  *  H  V  *  I  R  S  *  I  *  F  T  L  Q  K  L  V  L  V  Q  K  E  E  F  S  S  L  N  K  E  F  T  H  F  R  R  E  T  V  V  I  N  I  T  V  I  V  I  G  N  F  *  I  Q  I  R  A  T  I  S  F  K  C  K  *  K  M  Q  T  D  H  K  R  K  R  A  G  S  I  H  M  Q  C  F  L  I  S  W  R  H  C  A  K  K  I  C  H  S  *  H  V  A  V  I  S  Y  T  E  C  L  W  D  N  L  P  V  G  V  S  H  Q  Y  L  K  F  T  L  K  M  M  I  N  F  M  P  H  *  F  K  L  F  C  L  R  N  S  R  S  F  I  C  I  *  T  A  S  F  D  N  C  L  G  S  Y  L  I  S  S  V  P  S  A  I  L  F  A  F  S  L  T  M  I  S  T  F  C  R  P  T  V  G  K  T  A  L  S  M  V  L  S  S  F  S  S  S  S  S  I  R  S  L  P  *  Q  H  T  C  I  A  S  R  A  F  S  A  R  N  S  M  G  I  V  G  A  G  A  P  N  F  D  R  F  C  T  S  K  G  K  C  *  Q  K  W  Y  W  V  *  H  W  T  I  N  E  S  S  N  I  S  V  I  Y  G  Y  Q  T  V  H  I  L  C  L  V  L  N  L  M  K  P  V  M  G  *  L  Q  T  *  I  Y  S  I  Y  Y  C  K  Q  A  S  Q  *  E  L  G  R  A  M  L  L  E  S  S  K  N  T  V  C  M  C  R  Y  S  K  I  Y  A  V  L  E  D  S  N  N  M  E  A  E  F  *  V  P  H  Q  K  N  E  A  *  T  E  V  E  V  C  L  K  D  S  I  R  V  S  M  L  *  I  Y  *  *  A  L  K  V  R  *  H  K  *  K  E  A  K  N  R  W  Q  M  K  S  Y  E  P  P  L  L  H  S  S  L  R  *  S  F  V  L  Q  I  Q  Y  H  L  L  N  *  A  L  L  P  L  P  K  F  P  Q  I  *  V  N  Q  L  L  L  Q  L  T  N  N  T  V  A  H  T  E  D  P  L  S  I  N  K  A  R  K  I  K  V  N  N  L  *  I  K  P  S  H  L  I  A  S  K  N  Y  L  A  T  S  I  S  K  F  I  K  S  S  *  I  I  N  G  T  L  V  T  D  S  P  P  E  L  R  K  I  N  K  I  A  S  N  T  T  F  L  I  D  N  S  G  Y  E  T  K  N  R  Q  *  T  D  D  L  I  S  K  T  R  N  W  I  C  G  L  I  H  I  S  L  D  E  Q  D  R  T  A  I  G  V  G  I  I  S  S  G  W  K  C  I  E  T  S  K  V  T  K  R  G  R  D  *  :  V  T  V  D  G  G  G  R  R  R  R  V  E  R  G  D  N  H  H  S  V  T  C  G  G  R  S  I  F  V  L  I  F  A  P  F  V  Y  L  F  G  I  Y  L  A  M  S  F  I  I  *  L  S  N  N  N  N  I  S  N  T  V  K  K  I  K  I  I  Y  F  F  V  A  L  L  I  K  L  N  L  F  K  Y  L  </first_frame>
            <second_frame>  A  D  S  W  N  W  I  R  S  C  *  S  E  S  C  C  C  C  W  I  D  S  S  R  G  H  W  K  Q  Y  C  L  S  C  G  R  *  T  D  A  N  L  N  S  C  P  K  F  L  T  W  T  S  S  G  Y  Q  W  G  V  E  C  C  C  N  C  A  Q  S  L  *  F  G  R  Q  D  C  W  N  C  W  C  R  T  Y  W  Q  T  F  T  P  A  I  E  A  I  *  L  *  S  T  L  P  *  P  S  *  D  G  F  *  A  R  E  S  N  W  S  K  V  *  G  R  S  R  *  D  A  L  E  M  *  H  S  G  H  Q  Y  A  S  Y  R  E  N  K  V  R  F  L  F  L  *  L  P  V  V  N  L  Y  N  N  I  Y  *  Q  S  F  L  Y  S  S  Y  F  N  N  D  L  I  M  K  *  T  K  *  A  K  V  N  I  H  *  E  *  N  M  I  F  S  E  G  K  E  N  L  W  C  H  R  N  F  L  V  S  L  *  I  I  Y  K  V  V  V  Y  L  D  S  P  I  V  F  P  K  L  R  N  S  L  E  H  P  P  Y  T  M  I  H  D  F  G  *  A  Q  K  D  Y  L  N  D  G  P  P  W  I  L  H  L  Y  K  P  R  L  K  K  N  C  L  A  K  L  S  F  T  F  G  M  M  Q  K  T  F  D  I  L  S  V  *  T  T  A  T  S  N  M  F  L  E  I  M  F  S  F  C  S  S  F  N  F  L  F  E  D  L  S  S  V  R  G  H  R  *  D  D  R  C  S  Q  Q  L  V  L  P  E  *  Y  D  C  Q  W  S  I  F  K  I  L  G  D  V  R  V  V  S  V  H  T  S  L  F  S  C  H  *  G  H  *  L  F  P  C  A  I  S  Q  I  A  H  N  F  N  Y  V  I  Q  R  N  V  *  Q  G  K  N  C  K  V  E  E  G  S  S  N  C  K  Q  C  S  R  S  N  Y  G  H  S  S  S  C  *  C  L  *  Q  R  S  Y  C  R :   I  Q  W  R  C  L  V  P  T  T  S  S  Q  G  P  S  M  A  L  H  A  K  P  S  Y  D  S  S  H  F  W  D  Y  H  *  C  T   : V  E  V  C  S  W  N  K  G  Y  V  G  Q  V  L  Q  G  *  G  F  P  C  *  K  L  H  C  Q  G  W  G  I  G  T  S  V  S  L  N  Y  L  C  I  E  L  C  L  D  F  C  V  K  *  T  G  K  P  C  L  Q  *  A  D  K  I  G  Y  F  M  F  F  *  N  S  N  A  V  F  L  R  V  S  C  N  F  C  D  G  N  I  C  P  L  L  *  W  R  S  M  Y  D  P  P  V  S  F  L  S  L  *  L  N  F  L  A  V  V  V  V  L  V  F  L  D  I  L  C  F  K  K  N  Y  L  L  V  C  *  Y  L  L  Q  S  L  G  *  S  F  L  R  R  Q  E  K  L  G  K  N  N  E  M  M  *  N  R  I  *  H  H  S  I  F  C  F  I  G  K  K  S  R  L  H  Q  S  G  T  S  D  F  *  T  T  S  F  F  T  Y  K  R  I  N  A  I  Y  A  P  F  D  T  Q  V  G  V  V  H  F  T  V  T  L  F  C  L  *  *  K  S  Q  L  V  Y  N  M  F  E  L  D  L  K  S  N  S  H  S  K  S  *  F  *  F  K  R  R  N  F  Q  A  L  I  R  S  L  L  I  F  D  V  R  L  S  S  L  T  L  Q  L  *  *  *  V  I  F  E  Y  K  S  E  P  L  Y  L  S  S  A  S  R  K  C  R  L  I  T  K  E  R  E  Q  A  A  Y  T  C  N  V  F  *  L  V  G  D  I  V  R  R  R  F  V  I  H  D  M  W  L  *  F  P  I  P  N  V  C  G  I  I  F  L  L  V  L  V  T  S  T  *  N  L  L  *  K  *  *  *  I  S  C  L  T  D  S  N  C  F  A  *  E  I  Q  G  L  S  F  A  S  E  L  L  L  L  I  I  A  W  A  H  I  *  F  L  Q  F  H  L  P  F  S  L  P  S  L  *  Q  *  F  L  P  F  A  A  R  L  *  E  R  Q  H  *  A  W  Y  L  A  V  F  H  L  L  H  Q  S  D  P  F  H  S  N  T  H  V  *  L  Q  E  L  S  Q  H  E  I  P  W  G  L  *  V  L  E  L  P  T  L  I  A  S  A  R  V  K  E  N  V  S  K  N  G  T  G  Y  N  T  G  P  *  T  R  V  Q  I  *  V  *  Y  M  A  I  K  P  C  T  F  C  A  W  C  *  I  *  *  S  P  *  W  D  S  C  K  H  K  F  T  R  Y  T  I  V  S  K  L  P  N  K  S  *  A  E  L  C  C  L  N  R  P  R  I  L  S  A  C  V  D  T  L  K  Y  M  Q  F  W  R  I  R  T  T  W  R  Q  S  S  K  Y  H  I  K  R  M  K  H  K  Q  K  L  K  Y  A  S  K  T  V  S  E  *  V  C  Y  K  F  T  D  K  H  *  K  *  G  N  I  N  E  K  K  L  K  I  V  G  K  *  N  L  T  N  L  P  C  F  I  H  H  C  D  E  V  L  F  F  K  F  N  I  I  C  *  T  K  P  C  Y  P  F  Q  N  F  L  R  F  E  *  T  S  S  Y  C  S  *  P  T  T  Q  *  H  I  Q  R  I  P  C  L  S  I  R  Q  G  K  S  R  S  I  I  Y  R  *  N  Q  V  T  *  L  Q  V  K  I  T  L  P  R  R  S  R  N  S  *  K  A  L  E  S  L  M  E  H  L  L  P  T  R  L  L  N  S  A  K  S  I  K  S  P  P  T  P  P  S  S  L  T  I  L  A  M  R  P  K  T  G  S  E  P  M  T  L  L  A  K  L  E  I  G  F  V  V  S  S  I  *  A  L  T  S  K  T  A  P  P  L  E  L  E  L  F  L  L  D  G  N  V  *  K  R  R  K  *  R  R  E  G  E  I  E :   L  Q  *  M  E  E  E  E  E  G  E  W  R  E  E  T  T  T  I  V  L  H  V  V  D  V  Q  S  L  F  *  Y  L  P  L  L  F  I  F  S  E  S  I  S  L  *  A  S  L  S  N  S  Q  I  I  I  I  L  V  I  Q  L  K  K  L  K  S  S  T  F  S  *  P  F  *  L  N  *  I  Y  L  N  T  * </second_frame>
            <third_frame>   L  T  A  G  I  G  S  D  H  V  D  L  K  A  A  A  A  A  G  L  T  V  A  E  V  T  G  S  N  T  V  S  V  A  E  D  E  L  M  R  I  L  I  L  V  R  N  F  L  P  G  H  H  Q  V  I  N  G  E  W  N  V  A  A  I  A  H  R  A  Y  D  L  E  G  K  T  V  G  T  V  G  A  G  R  I  G  R  L  L  L  Q  R  L  K  P  F  N  C  N  L  L  Y  H  D  R  L  K  M  D  S  E  L  E  N  Q  I  G  A  K  F  E  E  D  L  D  K  M  L  S  K  C  D  I  V  V  I  N  T  P  L  T  E  K  T  K  *  G  F  C  F  C  N  Y  P  S  *  T  Y  T  I  I  F  I  D  K  A  S  Y  I  Q  V  I  L  T  M  T  *  L  *  N  E  L  S  K  L  K  *  I  F  I  E  N  E  I  *  Y  L  A  K  G  R  R  I  F  G  V  I  V  I  F  W  Y  H  S  R  S  Y  I  K  *  L  Y  I  *  I  P  R  L  Y  S  L  S  *  E  I  L  L  S  I  H  H  I  L  *  Y  M  T  L  A  K  L  K  K  T  I  S  M  M  A  L  H  G  F  S  T  Y  I  S  H  G  *  R  K  I  A  W  P  S  C  L  L  P  L  A  *  C  K  K  H  L  I  F  F  L  C  E  P  L  L  R  V  I  C  S  *  R  S  C  F  L  F  V  L  P  L  I  F  Y  L  K  I  C  H  Q  L  E  V  I  G  R  M  I  D  V  L  S  N  L  C  C  Q  N  N  M  I  A  N  G  V  F  L  R  F  L  E  M  *  E  L  F  L  S  I  H  H  S  S  H  V  T  K  V  I  D  C  F  H  V  L  Y  R  K  L  L  T  I  L  T  M  *  S  R  G  M  F  D  K  E  R  I  A  K  L  K  K  G  V  L  I  V  N  N  A  R  G  A  I  M  D  T  Q  A  V  V  D  A  C  N  S  G  H  I  A   : G  Y  S  G  D  V  W  Y  P  Q  P  A  P  K  D  H  L  W  R  Y  M  P  N  Q  A  M  T  P  H  I  S  G  T  T  I  D  A  Q  :  L  R  Y  A  A  G  T  K  D  M  L  D  R  Y  F  K  G  E  D  F  P  A  E  N  Y  I  V  K  D  G  E  L  A  P  Q  Y  R  *  I  I  Y  V  *  S  C  V  *  I  S  V  L  N  K  L  A  S  R  V  F  N  K  L  I  K  L  A  T  L  C  S  S  R  T  L  M  Q  F  F  S  G  L  A  V  T  F  V  M  E  T  Y  V  L  F  C  D  G  G  L  C  M  I  L  Q  C  L  S  *  V  Y  N  *  T  S  L  L  W  *  L  Y  W  C  S  W  T  F  Y  V  L  K  K  I  I  F  L  F  A  S  I  C  C  S  R  *  V  N  L  F  Y  D  A  R  K  N  L  A  K  I  M  K  *  C  E  T  E  F  D  I  T  V  Y  F  A  L  L  G  R  K  A  D  F  I  S  L  E  L  Q  I  F  K  R  P  L  S  S  H  T  S  E  *  M  R  Y  M  R  H  L  T  P  K  L  E  W  F  I  L  Q  L  R  F  F  V  Y  N  K  K  V  N  *  Y  I  T  C  L  N  *  I  L  N  L  I  H  T  P  K  A  S  S  S  S  K  G  G  I  F  K  P  *  *  G  V  Y  S  F  S  T  *  D  C  R  H  *  H  Y  S  Y  S  N  R  *  F  L  N  T  N  Q  S  H  Y  I  F  Q  V  Q  V  E  N  A  D  *  S  Q  K  K  E  S  R  Q  H  T  H  A  M  F  F  N  *  L  A  T  L  C  E  E  D  L  S  F  M  T  C  G  C  D  F  L  Y  R  M  F  V  G  *  S  S  C  W  C  *  S  P  V  P  K  I  Y  F  K  N  D  D  K  F  H  A  S  L  I  Q  T  V  L  L  K  K  F  K  V  F  H  L  H  L  N  C  F  F  *  *  L  L  G  L  I  F  D  F  F  S  S  I  C  H  S  L  C  L  L  F  D  N  D  F  Y  L  L  P  P  D  C  R  K  D  S  I  K  H  G  T  *  Q  F  F  I  F  F  I  N  Q  I  P  S  I  A  T  H  M  Y  S  F  K  S  F  L  S  T  K  F  H  G  D  C  R  C  W  S  S  Q  L  *  S  L  L  H  E  *  R  K  M  L  A  K  M  V  L  G  I  T  L  D  H  K  R  E  F  K  Y  K  C  D  I  W  L  S  N  R  A  H  S  V  L  G  A  K  S  N  E  A  R  N  G  I  A  A  N  I  N  L  L  D  I  L  L  *  A  S  F  P  I  R  V  R  Q  S  Y  A  A  *  I  V  Q  E  Y  C  L  H  V  S  I  L  *  N  I  C  S  F  G  G  F  E  Q  H  G  G  R  V  L  S  T  T  S  K  E  *  S  I  N  R  S  *  S  M  P  Q  R  Q  Y  P  S  K  Y  A  I  N  L  L  I  S  I  E  S  K  V  T  *  M  K  R  S  *  K  S  L  A  N  E  I  L  R  T  S  L  A  S  F  I  I  A  M  K  F  C  S  S  N  S  I  S  F  A  K  L  S  L  A  T  P  S  K  I  S  S  D  L  S  K  P  A  P  T  A  A  N  Q  Q  H  S  S  T  Y  R  G  S  P  V  Y  Q  *  G  K  E  N  Q  G  Q  *  S  I  D  K  T  K  S  L  D  C  K  *  K  L  P  C  H  V  D  L  E  I  H  K  K  L  L  N  H  *  W  N  T  C  Y  R  L  A  S  *  T  P  Q  N  Q  *  N  R  L  Q  H  H  L  P  H  *  Q  F  W  L  *  D  Q  K  Q  A  V  N  R  *  P  Y  *  Q  N  *  K  L  D  L  W  S  H  P  Y  K  P  *  R  A  R  P  H  R  H  W  S  W  N  Y  F  F  W  M  E  M  Y  R  N  V  E  S  N  E  E  R  E  R  L   : S  Y  S  R  W  R  R  K  K  K  E  S  G  E  R  R  Q  P  P  *  C  Y  M  W  W  T  F  N  L  C  F  D  I  C  P  F  C  L  S  F  R  N  L  S  R  Y  E  L  H  Y  L  T  L  K  *  *  *  Y  *  *  Y  S  *  K  N  *  N  H  L  L  F  R  S  P  F  D  *  I  K  F  I  *  I  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E02.1" strand="+"/>
                <serials PGL_serial="6" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="67872" stop="68309"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>435</number_coding_nucleotides>
                  <number_encoded_amino_acids>145</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LTAGIGSDHVDLKAAAAAGLTVAEVTGSNTVSVAEDELMRILILVRNFLPGHHQVINGEWNVAAIAHRAYDLEGKTVGTVGAGRIGRLLLQRLKPFNCNLLYHDRLKMDSELENQIGAKFEEDLDKMLSKCDIVVINTPLTEKTK*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E02.1" strand="+"/>
                <serials PGL_serial="6" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="69042" stop="69171"/>
                    <exon start="69407" stop="69519"/>
                    <exon start="69631" stop="69744"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>354</number_coding_nucleotides>
                  <number_encoded_amino_acids>118</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SRGMFDKERIAKLKKGVLIVNNARGAIMDTQAVVDACNSGHIAGYSGDVWYPQPAPKDHLWRYMPNQAMTPHISGTTIDAQLRYAAGTKDMLDRYFKGEDFPAENYIVKDGELAPQYR*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E02.1" strand="+"/>
                <serials PGL_serial="6" AGS_serial="2" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="71488" stop="71691"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>201</number_coding_nucleotides>
                  <number_encoded_amino_acids>67</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KSLANEILRTSLASFIIAMKFCSSNSISFAKLSLATPSKISSDLSKPAPTAANQQHSSTYRGSPVYQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="65551" e_stop="66074"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="65551" e_stop="66074" e_length="524"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65551" stop="66074"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U590370" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTTCTCTCTGTTTTTAGTAAGTACGAAACCCTTTTCTGTAAATCCAAAAAAAATTCCGATGGCGATGAGGCGTGTAGCTTCTACAGCAGCTCGTGCTATTGCTTCACCTTCATCCTTAGTTTTTACCAGAGAACTTCAGGTAACTAGCCATTTCTCCTCAATAGCCACTTTTTGTTGCTTTTGTTTTATATGACCTAGTTTTCGCCCTTTGATGAATTATCGGAAACCGGCACGGATCAACTCCGATTTTTCGAGAATCAAGTGAGTTGGAGATTGGAACAGAGGAAACTAAAGGAATTTAACCGTGTAAAGGAAAAAATTAAACACACTGTATTTGGTGCTCTACCCCTCGTCTCTTCTTTTTGGCTTTCCCCGTACTCTACACACCAAATGAAATGGCTCGGATATGAAAGGACTAATAACTTTTCAGTTTTCATTACTGCGTCCTTTTTTAAGCTTTCAGTTTTAATTTGCGTGAATATACCTAATTTTTATTAGGGTAGAGTTATATGTTTCAAATTAAA</gDNA_template>
            <first_frame> L  L  S  V  F  S  K  Y  E  T  L  F  C  K  S  K  K  N  S  D  G  D  E  A  C  S  F  Y  S  S  S  C  Y  C  F  T  F  I  L  S  F  Y  Q  R  T  S  G  N  *  P  F  L  L  N  S  H  F  L  L  L  L  F  Y  M  T  *  F  S  P  F  D  E  L  S  E  T  G  T  D  Q  L  R  F  F  E  N  Q  V  S  W  R  L  E  Q  R  K  L  K  E  F  N  R  V  K  E  K  I  K  H  T  V  F  G  A  L  P  L  V  S  S  F  W  L  S  P  Y  S  T  H  Q  M  K  W  L  G  Y  E  R  T  N  N  F  S  V  F  I  T  A  S  F  F  K  L  S  V  L  I  C  V  N  I  P  N  F  Y  *  G  R  V  I  C  F  K  L   </first_frame>
            <second_frame>  F  S  L  F  L  V  S  T  K  P  F  S  V  N  P  K  K  I  P  M  A  M  R  R  V  A  S  T  A  A  R  A  I  A  S  P  S  S  L  V  F  T  R  E  L  Q  V  T  S  H  F  S  S  I  A  T  F  C  C  F  C  F  I  *  P  S  F  R  P  L  M  N  Y  R  K  P  A  R  I  N  S  D  F  S  R  I  K  *  V  G  D  W  N  R  G  N  *  R  N  L  T  V  *  R  K  K  L  N  T  L  Y  L  V  L  Y  P  S  S  L  L  F  G  F  P  R  T  L  H  T  K  *  N  G  S  D  M  K  G  L  I  T  F  Q  F  S  L  L  R  P  F  L  S  F  Q  F  *  F  A  *  I  Y  L  I  F  I  R  V  E  L  Y  V  S  N  *  </second_frame>
            <third_frame>   S  L  C  F  *  *  V  R  N  P  F  L  *  I  Q  K  K  F  R  W  R  *  G  V  *  L  L  Q  Q  L  V  L  L  L  H  L  H  P  *  F  L  P  E  N  F  R  *  L  A  I  S  P  Q  *  P  L  F  V  A  F  V  L  Y  D  L  V  F  A  L  *  *  I  I  G  N  R  H  G  S  T  P  I  F  R  E  S  S  E  L  E  I  G  T  E  E  T  K  G  I  *  P  C  K  G  K  N  *  T  H  C  I  W  C  S  T  P  R  L  F  F  L  A  F  P  V  L  Y  T  P  N  E  M  A  R  I  *  K  D  *  *  L  F  S  F  H  Y  C  V  L  F  *  A  F  S  F  N  L  R  E  Y  T  *  F  L  L  G  *  S  Y  M  F  Q  I  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E02.1" strand="+"/>
                <serials PGL_serial="6" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="65749" stop="66048"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>297</number_coding_nucleotides>
                  <number_encoded_amino_acids>99</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FSPFDELSETGTDQLRFFENQVSWRLEQRKLKEFNRVKEKIKHTVFGALPLVSSFWLSPYSTHQMKWLGYERTNNFSVFITASFFKLSVLICVNIPNFY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="-" PGL_start="73517" PGL_stop="70650"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="73517" e_stop="73423"/>
            <exon e_start="72079" e_stop="71759"/>
            <exon e_start="71681" e_stop="71517"/>
            <exon e_start="71043" e_stop="70650"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.962" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.925" e_score="0.994"/>
          <exon-intron don_prob="0.981" acc_prob="0.983" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="73517" e_stop="73423" e_length="95"/>
          </exon>
          <intron i_serial="1" don_prob="0.962" acc_prob="0.000">
            <gDNA_intron_boundary i_start="73422" i_stop="72080" i_length="1343"/>
          </intron>
          <exon e_serial="2" e_score="0.994">
            <gDNA_exon_boundary e_start="72079" e_stop="71759" e_length="321"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.925">
            <gDNA_intron_boundary i_start="71758" i_stop="71682" i_length="77"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="71681" e_stop="71517" e_length="165"/>
          </exon>
          <intron i_serial="3" don_prob="0.981" acc_prob="0.983">
            <gDNA_intron_boundary i_start="71516" i_stop="71044" i_length="473"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="71043" e_stop="70650" e_length="394"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73517" stop="73423"/>
              <exon start="72079" stop="71759"/>
              <exon start="71681" stop="71517"/>
              <exon start="71043" stop="70650"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U579752" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72066" stop="71759"/>
              <exon start="71681" stop="71528"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U590880" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAAATATCAAAACAAAGATTGAACGTCCACCACATGTAACACTATGGTGGTTGTCTCCTCTCTCCACTCTCCTTCTTCTTCCTCCTCCATCTACT : GTCTACTCAATCTCTCCCTCTCTTCGTTACTTTCGACGTTTCTATACATTTCCATCCAGAAGAAATAATTCCAACTCCAATGGCGGTGCGGTCTTGCTCGTCAAGGCTTATATGGATGAGACCACAAATCCAATTTCTAGTTTTGCTAATAAGGTCATCGGTTCACTGCCTGTTTTTGGTCTCATAGCCAGAATTGTCAATGAGGAAGGTGGTGTTGGAGGCGATTTTATTGATTTTGCGGAGTTCAGGAGGCGAGTCGGTAACAAGTGTTCCATTAATGATTCAAGAGCTTTTTATGAATTTCGAGATCGACGTGGCAAG : ACAGGGGATCCTCTGTATGTGCTACTGTGTTGTTGGTTAGCTGCAGTAGGAGCTGGTTTACTCAAATCTGAGGAAATTTTGGAAGGGGTAGCAAGGCTTAGTTTAGCAAATGATATTGAATTTGAAGAACAAAACTTCATCGCAATGATGAATGAAGCAAGGGAG : AAGCGATCAAAGTTGGGAGCTCCAGCACCTACAATCCCCATGGAATTTCGTGCTGAGAAAGCTCTTGAAGCTATACATGTGTGTTGCTATGGAAGGGATCTGATTGATGAAGAAGATGAAAAACTGCTAAGTACCATGCTTAATGCTGTCTTTCCTACAGTCGGGCGGCAAAAGGTAGAAATCATTGTCAAAGAGAAGGCAAAGAGAATGGCAGATGGAACTGAAGAAATCAAATATGAGCCCAAGCAATTATCAAAAGAAGCAGTTCAGATGCAAATGAAAGACCTTGAATTTCTTAAGCAAAACAGTTTGAATCAGTGAGGCATGAAATTTATCATCATTTTTAAAGTAAATTTTAGGTACTGGTGACTAACACCAACAGGAAGATTATCCC</gDNA_template>
            <first_frame> Q  I  S  K  Q  R  L  N  V  H  H  M  *  H  Y  G  G  C  L  L  S  P  L  S  F  F  F  L  L  H  L  L :   S  T  Q  S  L  P  L  F  V  T  F  D  V  S  I  H  F  H  P  E  E  I  I  P  T  P  M  A  V  R  S  C  S  S  R  L  I  W  M  R  P  Q  I  Q  F  L  V  L  L  I  R  S  S  V  H  C  L  F  L  V  S  *  P  E  L  S  M  R  K  V  V  L  E  A  I  L  L  I  L  R  S  S  G  G  E  S  V  T  S  V  P  L  M  I  Q  E  L  F  M  N  F  E  I  D  V  A  R :   Q  G  I  L  C  M  C  Y  C  V  V  G  *  L  Q  *  E  L  V  Y  S  N  L  R  K  F  W  K  G  *  Q  G  L  V  *  Q  M  I  L  N  L  K  N  K  T  S  S  Q  *  *  M  K  Q  G  R :   S  D  Q  S  W  E  L  Q  H  L  Q  S  P  W  N  F  V  L  R  K  L  L  K  L  Y  M  C  V  A  M  E  G  I  *  L  M  K  K  M  K  N  C  *  V  P  C  L  M  L  S  F  L  Q  S  G  G  K  R  *  K  S  L  S  K  R  R  Q  R  E  W  Q  M  E  L  K  K  S  N  M  S  P  S  N  Y  Q  K  K  Q  F  R  C  K  *  K  T  L  N  F  L  S  K  T  V  *  I  S  E  A  *  N  L  S  S  F  L  K  *  I  L  G  T  G  D  *  H  Q  Q  E  D  Y  P </first_frame>
            <second_frame>  K  Y  Q  N  K  D  *  T  S  T  T  C  N  T  M  V  V  V  S  S  L  H  S  P  S  S  S  S  S  I  Y   : C  L  L  N  L  S  L  S  S  L  L  S  T  F  L  Y  I  S  I  Q  K  K  *  F  Q  L  Q  W  R  C  G  L  A  R  Q  G  L  Y  G  *  D  H  K  S  N  F  *  F  C  *  *  G  H  R  F  T  A  C  F  W  S  H  S  Q  N  C  Q  *  G  R  W  C  W  R  R  F  Y  *  F  C  G  V  Q  E  A  S  R  *  Q  V  F  H  *  *  F  K  S  F  L  *  I  S  R  S  T  W  Q   : D  R  G  S  S  V  C  A  T  V  L  L  V  S  C  S  R  S  W  F  T  Q  I  *  G  N  F  G  R  G  S  K  A  *  F  S  K  *  Y  *  I  *  R  T  K  L  H  R  N  D  E  *  S  K  G   : E  A  I  K  V  G  S  S  S  T  Y  N  P  H  G  I  S  C  *  E  S  S  *  S  Y  T  C  V  L  L  W  K  G  S  D  *  *  R  R  *  K  T  A  K  Y  H  A  *  C  C  L  S  Y  S  R  A  A  K  G  R  N  H  C  Q  R  E  G  K  E  N  G  R  W  N  *  R  N  Q  I  *  A  Q  A  I  I  K  R  S  S  S  D  A  N  E  R  P  *  I  S  *  A  K  Q  F  E  S  V  R  H  E  I  Y  H  H  F  *  S  K  F  *  V  L  V  T  N  T  N  R  K  I  I   </second_frame>
            <third_frame>   N  I  K  T  K  I  E  R  P  P  H  V  T  L  W  W  L  S  P  L  S  T  L  L  L  L  P  P  P  S  T  :  V  Y  S  I  S  P  S  L  R  Y  F  R  R  F  Y  T  F  P  S  R  R  N  N  S  N  S  N  G  G  A  V  L  L  V  K  A  Y  M  D  E  T  T  N  P  I  S  S  F  A  N  K  V  I  G  S  L  P  V  F  G  L  I  A  R  I  V  N  E  E  G  G  V  G  G  D  F  I  D  F  A  E  F  R  R  R  V  G  N  K  C  S  I  N  D  S  R  A  F  Y  E  F  R  D  R  R  G  K  :  T  G  D  P  L  Y  V  L  L  C  C  W  L  A  A  V  G  A  G  L  L  K  S  E  E  I  L  E  G  V  A  R  L  S  L  A  N  D  I  E  F  E  E  Q  N  F  I  A  M  M  N  E  A  R  E  :  K  R  S  K  L  G  A  P  A  P  T  I  P  M  E  F  R  A  E  K  A  L  E  A  I  H  V  C  C  Y  G  R  D  L  I  D  E  E  D  E  K  L  L  S  T  M  L  N  A  V  F  P  T  V  G  R  Q  K  V  E  I  I  V  K  E  K  A  K  R  M  A  D  G  T  E  E  I  K  Y  E  P  K  Q  L  S  K  E  A  V  Q  M  Q  M  K  D  L  E  F  L  K  Q  N  S  L  N  Q  *  G  M  K  F  I  I  I  F  K  V  N  F  R  Y  W  *  L  T  P  T  G  R  L  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E02.1" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="73515" stop="73423"/>
                    <exon start="72079" stop="71759"/>
                    <exon start="71681" stop="71517"/>
                    <exon start="71043" stop="70723"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>897</number_coding_nucleotides>
                  <number_encoded_amino_acids>299</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NIKTKIERPPHVTLWWLSPLSTLLLLPPPSTVYSISPSLRYFRRFYTFPSRRNNSNSNGGAVLLVKAYMDETTNPISSFANKVIGSLPVFGLIARIVNEEGGVGGDFIDFAEFRRRVGNKCSINDSRAFYEFRDRRGKTGDPLYVLLCCWLAAVGAGLLKSEEILEGVARLSLANDIEFEEQNFIAMMNEAREKRSKLGAPAPTIPMEFRAEKALEAIHVCCYGRDLIDEEDEKLLSTMLNAVFPTVGRQKVEIIVKEKAKRMADGTEEIKYEPKQLSKEAVQMQMKDLEFLKQNSLNQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="74162" PGL_stop="81094"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="74162" e_stop="74375"/>
            <exon e_start="74467" e_stop="74619"/>
            <exon e_start="75587" e_stop="75624"/>
            <exon e_start="75859" e_stop="75881"/>
            <exon e_start="76747" e_stop="76853"/>
            <exon e_start="76940" e_stop="76991"/>
            <exon e_start="77078" e_stop="77162"/>
            <exon e_start="77856" e_stop="77946"/>
            <exon e_start="78746" e_stop="78784"/>
            <exon e_start="78982" e_stop="79049"/>
            <exon e_start="79143" e_stop="79205"/>
            <exon e_start="79311" e_stop="79366"/>
            <exon e_start="79447" e_stop="79520"/>
            <exon e_start="79653" e_stop="79928"/>
            <exon e_start="80027" e_stop="80107"/>
            <exon e_start="80178" e_stop="80269"/>
            <exon e_start="80408" e_stop="80423"/>
            <exon e_start="80533" e_stop="80643"/>
            <exon e_start="80736" e_stop="81094"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="0.995"/>
          <exon-intron don_prob="0.998" acc_prob="0.915" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.964" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.908" e_score="1.000"/>
          <exon-intron don_prob="0.864" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.983" acc_prob="0.938" e_score="1.000"/>
          <exon-intron don_prob="0.882" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.768" e_score="1.000"/>
          <exon-intron don_prob="0.822" acc_prob="0.979" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.939" acc_prob="0.976" e_score="1.000"/>
          <exon-intron don_prob="0.982" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.961" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.873" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.957" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.470" acc_prob="0.434" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.956" e_score="1.000"/>
          <exon-intron don_prob="0.408" acc_prob="0.976" e_score="1.000"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="74162" e_stop="74375" e_length="214"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="74376" i_stop="74466" i_length="91"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="74467" e_stop="74619" e_length="153"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.915">
            <gDNA_intron_boundary i_start="74620" i_stop="75586" i_length="967"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="75587" e_stop="75624" e_length="38"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.964">
            <gDNA_intron_boundary i_start="75625" i_stop="75858" i_length="234"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="75859" e_stop="75881" e_length="23"/>
          </exon>
          <intron i_serial="4" don_prob="0.991" acc_prob="0.908">
            <gDNA_intron_boundary i_start="75882" i_stop="76746" i_length="865"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="76747" e_stop="76853" e_length="107"/>
          </exon>
          <intron i_serial="5" don_prob="0.864" acc_prob="0.996">
            <gDNA_intron_boundary i_start="76854" i_stop="76939" i_length="86"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="76940" e_stop="76991" e_length="52"/>
          </exon>
          <intron i_serial="6" don_prob="0.983" acc_prob="0.938">
            <gDNA_intron_boundary i_start="76992" i_stop="77077" i_length="86"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="77078" e_stop="77162" e_length="85"/>
          </exon>
          <intron i_serial="7" don_prob="0.882" acc_prob="1.000">
            <gDNA_intron_boundary i_start="77163" i_stop="77855" i_length="693"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="77856" e_stop="77946" e_length="91"/>
          </exon>
          <intron i_serial="8" don_prob="1.000" acc_prob="0.768">
            <gDNA_intron_boundary i_start="77947" i_stop="78745" i_length="799"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="78746" e_stop="78784" e_length="39"/>
          </exon>
          <intron i_serial="9" don_prob="0.822" acc_prob="0.979">
            <gDNA_intron_boundary i_start="78785" i_stop="78981" i_length="197"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="78982" e_stop="79049" e_length="68"/>
          </exon>
          <intron i_serial="10" don_prob="0.986" acc_prob="0.987">
            <gDNA_intron_boundary i_start="79050" i_stop="79142" i_length="93"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="79143" e_stop="79205" e_length="63"/>
          </exon>
          <intron i_serial="11" don_prob="0.939" acc_prob="0.976">
            <gDNA_intron_boundary i_start="79206" i_stop="79310" i_length="105"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="79311" e_stop="79366" e_length="56"/>
          </exon>
          <intron i_serial="12" don_prob="0.982" acc_prob="0.993">
            <gDNA_intron_boundary i_start="79367" i_stop="79446" i_length="80"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="79447" e_stop="79520" e_length="74"/>
          </exon>
          <intron i_serial="13" don_prob="0.961" acc_prob="0.999">
            <gDNA_intron_boundary i_start="79521" i_stop="79652" i_length="132"/>
          </intron>
          <exon e_serial="14" e_score="1.000">
            <gDNA_exon_boundary e_start="79653" e_stop="79928" e_length="276"/>
          </exon>
          <intron i_serial="14" don_prob="0.873" acc_prob="0.993">
            <gDNA_intron_boundary i_start="79929" i_stop="80026" i_length="98"/>
          </intron>
          <exon e_serial="15" e_score="1.000">
            <gDNA_exon_boundary e_start="80027" e_stop="80107" e_length="81"/>
          </exon>
          <intron i_serial="15" don_prob="0.957" acc_prob="0.992">
            <gDNA_intron_boundary i_start="80108" i_stop="80177" i_length="70"/>
          </intron>
          <exon e_serial="16" e_score="1.000">
            <gDNA_exon_boundary e_start="80178" e_stop="80269" e_length="92"/>
          </exon>
          <intron i_serial="16" don_prob="0.470" acc_prob="0.434">
            <gDNA_intron_boundary i_start="80270" i_stop="80407" i_length="138"/>
          </intron>
          <exon e_serial="17" e_score="1.000">
            <gDNA_exon_boundary e_start="80408" e_stop="80423" e_length="16"/>
          </exon>
          <intron i_serial="17" don_prob="0.990" acc_prob="0.956">
            <gDNA_intron_boundary i_start="80424" i_stop="80532" i_length="109"/>
          </intron>
          <exon e_serial="18" e_score="1.000">
            <gDNA_exon_boundary e_start="80533" e_stop="80643" e_length="111"/>
          </exon>
          <intron i_serial="18" don_prob="0.408" acc_prob="0.976">
            <gDNA_intron_boundary i_start="80644" i_stop="80735" i_length="92"/>
          </intron>
          <exon e_serial="19" e_score="0.997">
            <gDNA_exon_boundary e_start="80736" e_stop="81094" e_length="359"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="74162" stop="74375"/>
              <exon start="74467" stop="74619"/>
              <exon start="75587" stop="75624"/>
              <exon start="75859" stop="75881"/>
              <exon start="76747" stop="76853"/>
              <exon start="76940" stop="76991"/>
              <exon start="77078" stop="77162"/>
              <exon start="77856" stop="77946"/>
              <exon start="78746" stop="78784"/>
              <exon start="78982" stop="79049"/>
              <exon start="79143" stop="79205"/>
              <exon start="79311" stop="79366"/>
              <exon start="79447" stop="79520"/>
              <exon start="79653" stop="79928"/>
              <exon start="80027" stop="80107"/>
              <exon start="80178" stop="80269"/>
              <exon start="80408" stop="80423"/>
              <exon start="80533" stop="80643"/>
              <exon start="80736" stop="81094"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U571736" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACGGCCTGTGTCGCTTGCTGCTGCAGCAATAGAACAGAAATTAAAAAAACGAGACATTTGATAATAGTAATTGAAATAAAGAGACTTTGACGGCACTACTATATCACTACTCACATTCTCCTTCCCATTTTCGTGCAAATCAAATATATTCTTCCTCCTACTCTACGCCAGCTGCTCTCCTCTCTCTTTCTCTCTCCTTTCGGCACCTCAAAAG : AGTGGTGAAGTAGAGAGCCCAAGGGTGAGTATGGGAGCTTTTTCAAATGAAGAACTTAGTTTCTCTTCCAATTTCGACTTCGCTTCCTCTCAGGATCTCAGATTCTCTAAGCAAATCCATGACAACGTTCACGGCAACATCTACATCGACCCG : CTCTACTTGAAGTTCATTGACACAGAACAATTTCAAAG : GCTTCGTGATCTTAAACAACTAG : GTGTGACACACATGGTCTATCCAGGAGCAGTGCATTCTAGATTTGAGCATTCCCTTGGAGTGTATTGGCTTGCCAATGAAGCTGTCCATAAGCTTAAAACCCACCAA : GGTATGGAGCTTGGAATTGATCACTTTGATATACAAACAGTGAAACTTGCAG : GTCTTCTACATGATATTGGACATGGACCTTTTAGCCACTTGTTTGAACGCGAGTTTCTTCCTCAAGTTTGCAATGGATTGGACTG : GTCTCATGAGCAAATGTCTGTGGACATGATTGATCACATTGTTGATGAGCGTCGTATTGATATTGATTCTGGAACCATTAAAAGGGTCAAG : GAAATGATACTTGCTAGTTCCAAGTTTACGTTGACAAAA : AGCTCAAGGGAGAAGCAGTTCTTATATGATATTGTGGCTAATGGTCGAAATGGAGTCGATGTTGACAA : GTTTGATTACATTGTCCGAGATAGCCGTGCGTGTGCAGTAGGATGCAATTTTCAATTTGAGAG : GTTGATGGAAACTATGAGAGTATTGGGAGATGAGATATGTTATCGAGCCAAAGATT : ATTTAACCATCCACAAGTTATTTGCCACACGAGCTGATCTACACAGAACTGTTTATACTCACGCTAAAGTGAAG : GCAATAGAGCTTATGATTGTAGATGCACTAGTGAAAGCAAATGATTATCTACACATATCATCACATATAGAGCATCCTTCTCAATACTGGAAGGTCGGCATGGTCTTTTTGTTAGCTTCAACCTCCTTAATTCATGGAACCATGAAAATAATTTCTCTGTGTATGTGGAAGTAGTTAGATGACACCATTTTAAAAACCATCGAGACTGCTCCAGACCCGGAACTGAAGGAATCTAGGGATTTGATCCTTCGTGTCCGAAGGAGAGATTTGTACCAG : TTCTGTAATGAGTATGCTGTCCCAAGAGACAAAATAGAGCATTTCAAGGATGTCACGGCACATGATATTGTCTGTTCGCAG : AAAAGTAGCAGTGAGACACTTAATGAAGAGGATGTTGCTGTGACCAATGTCAGGATAGATCTGACACGCGGGAGGCATAATCCGCTTGAAAG : TATCCATTTTTTCAAG : GATTATGAAAGTGAGGAGAAGTTCTCTATACCTGATGATCGCATCAGCCACTTGCTGCCATCATCATATCAAGATATGATTGTGAGAGTCTACTCCAAAAAGCCCCACCTG : GTGGAAGCTATTTCTGATGCATTTGAAAATTTCCAGTTAAAGACTTATGGAATAAAAGCACAGGTTCATGCAACACCTGAGAAGAAAAAACGCCGTGTATGATATTTCCCCAGTCATCACTACAAAATCCACAGTAGATATATGTGATTATAGTATATCTCAAGCAACATATTACAGTCCATTTGTACAGAAGTCTTTAAATGACACGTGAAAGGCCTCTCAAGAGTTATACTAGAGTTTTTGTAGAAAGTTGCTACCATTTACTGGATATGATAATATCCTCCGAGTACTCTCAACAATTTCTTGTATCCTAGCATTACTCGAAAAATGGATTTCTTGGTATAACCGACTTCTGAATA</gDNA_template>
            <first_frame> T  A  C  V  A  C  C  C  S  N  R  T  E  I  K  K  T  R  H  L  I  I  V  I  E  I  K  R  L  *  R  H  Y  Y  I  T  T  H  I  L  L  P  I  F  V  Q  I  K  Y  I  L  P  P  T  L  R  Q  L  L  S  S  L  F  L  S  P  F  G  T  S  K   : E  W  *  S  R  E  P  K  G  E  Y  G  S  F  F  K  *  R  T  *  F  L  F  Q  F  R  L  R  F  L  S  G  S  Q  I  L  *  A  N  P  *  Q  R  S  R  Q  H  L  H  R  P   : A  L  L  E  V  H  *  H  R  T  I  S  K  :  A  S  *  S  *  T  T  R :   C  D  T  H  G  L  S  R  S  S  A  F  *  I  *  A  F  P  W  S  V  L  A  C  Q  *  S  C  P  *  A  *  N  P  P   : R  Y  G  A  W  N  *  S  L  *  Y  T  N  S  E  T  C  R :   S  S  T  *  Y  W  T  W  T  F  *  P  L  V  *  T  R  V  S  S  S  S  L  Q  W  I  G  L  :  V  S  *  A  N  V  C  G  H  D  *  S  H  C  *  *  A  S  Y  *  Y  *  F  W  N  H  *  K  G  Q   : G  N  D  T  C  *  F  Q  V  Y  V  D  K   : K  L  K  G  E  A  V  L  I  *  Y  C  G  *  W  S  K  W  S  R  C  *  Q  :  V  *  L  H  C  P  R  *  P  C  V  C  S  R  M  Q  F  S  I  *  E  :  V  D  G  N  Y  E  S  I  G  R  *  D  M  L  S  S  Q  R  L :   F  N  H  P  Q  V  I  C  H  T  S  *  S  T  Q  N  C  L  Y  S  R  *  S  E   : G  N  R  A  Y  D  C  R  C  T  S  E  S  K  *  L  S  T  H  I  I  T  Y  R  A  S  F  S  I  L  E  G  R  H  G  L  F  V  S  F  N  L  L  N  S  W  N  H  E  N  N  F  S  V  Y  V  E  V  V  R  *  H  H  F  K  N  H  R  D  C  S  R  P  G  T  E  G  I  *  G  F  D  P  S  C  P  K  E  R  F  V  P   : V  L  *  *  V  C  C  P  K  R  Q  N  R  A  F  Q  G  C  H  G  T  *  Y  C  L  F  A   : E  K  *  Q  *  D  T  *  *  R  G  C  C  C  D  Q  C  Q  D  R  S  D  T  R  E  A  *  S  A  *  K  :  Y  P  F  F  Q   : G  L  *  K  *  G  E  V  L  Y  T  *  *  S  H  Q  P  L  A  A  I  I  I  S  R  Y  D  C  E  S  L  L  Q  K  A  P  P   : G  G  S  Y  F  *  C  I  *  K  F  P  V  K  D  L  W  N  K  S  T  G  S  C  N  T  *  E  E  K  T  P  C  M  I  F  P  Q  S  S  L  Q  N  P  Q  *  I  Y  V  I  I  V  Y  L  K  Q  H  I  T  V  H  L  Y  R  S  L  *  M  T  R  E  R  P  L  K  S  Y  T  R  V  F  V  E  S  C  Y  H  L  L  D  M  I  I  S  S  E  Y  S  Q  Q  F  L  V  S  *  H  Y  S  K  N  G  F  L  G  I  T  D  F  *  I </first_frame>
            <second_frame>  R  P  V  S  L  A  A  A  A  I  E  Q  K  L  K  K  R  D  I  *  *  *  *  L  K  *  R  D  F  D  G  T  T  I  S  L  L  T  F  S  F  P  F  S  C  K  S  N  I  F  F  L  L  L  Y  A  S  C  S  P  L  S  F  S  L  L  S  A  P  Q  K  :  S  G  E  V  E  S  P  R  V  S  M  G  A  F  S  N  E  E  L  S  F  S  S  N  F  D  F  A  S  S  Q  D  L  R  F  S  K  Q  I  H  D  N  V  H  G  N  I  Y  I  D  P  :  L  Y  L  K  F  I  D  T  E  Q  F  Q  R :   L  R  D  L  K  Q  L   : G  V  T  H  M  V  Y  P  G  A  V  H  S  R  F  E  H  S  L  G  V  Y  W  L  A  N  E  A  V  H  K  L  K  T  H  Q  :  G  M  E  L  G  I  D  H  F  D  I  Q  T  V  K  L  A   : G  L  L  H  D  I  G  H  G  P  F  S  H  L  F  E  R  E  F  L  P  Q  V  C  N  G  L  D  W :   S  H  E  Q  M  S  V  D  M  I  D  H  I  V  D  E  R  R  I  D  I  D  S  G  T  I  K  R  V  K  :  E  M  I  L  A  S  S  K  F  T  L  T  K  :  S  S  R  E  K  Q  F  L  Y  D  I  V  A  N  G  R  N  G  V  D  V  D  K :   F  D  Y  I  V  R  D  S  R  A  C  A  V  G  C  N  F  Q  F  E  R :   L  M  E  T  M  R  V  L  G  D  E  I  C  Y  R  A  K  D   : Y  L  T  I  H  K  L  F  A  T  R  A  D  L  H  R  T  V  Y  T  H  A  K  V  K  :  A  I  E  L  M  I  V  D  A  L  V  K  A  N  D  Y  L  H  I  S  S  H  I  E  H  P  S  Q  Y  W  K  V  G  M  V  F  L  L  A  S  T  S  L  I  H  G  T  M  K  I  I  S  L  C  M  W  K  *  L  D  D  T  I  L  K  T  I  E  T  A  P  D  P  E  L  K  E  S  R  D  L  I  L  R  V  R  R  R  D  L  Y  Q  :  F  C  N  E  Y  A  V  P  R  D  K  I  E  H  F  K  D  V  T  A  H  D  I  V  C  S  Q  :  K  S  S  S  E  T  L  N  E  E  D  V  A  V  T  N  V  R  I  D  L  T  R  G  R  H  N  P  L  E  S :   I  H  F  F  K  :  D  Y  E  S  E  E  K  F  S  I  P  D  D  R  I  S  H  L  L  P  S  S  Y  Q  D  M  I  V  R  V  Y  S  K  K  P  H  L  :  V  E  A  I  S  D  A  F  E  N  F  Q  L  K  T  Y  G  I  K  A  Q  V  H  A  T  P  E  K  K  K  R  R  V  *  Y  F  P  S  H  H  Y  K  I  H  S  R  Y  M  *  L  *  Y  I  S  S  N  I  L  Q  S  I  C  T  E  V  F  K  *  H  V  K  G  L  S  R  V  I  L  E  F  L  *  K  V  A  T  I  Y  W  I  *  *  Y  P  P  S  T  L  N  N  F  L  Y  P  S  I  T  R  K  M  D  F  L  V  *  P  T  S  E   </second_frame>
            <third_frame>   G  L  C  R  L  L  L  Q  Q  *  N  R  N  *  K  N  E  T  F  D  N  S  N  *  N  K  E  T  L  T  A  L  L  Y  H  Y  S  H  S  P  S  H  F  R  A  N  Q  I  Y  S  S  S  Y  S  T  P  A  A  L  L  S  L  S  L  S  F  R  H  L  K  R :   V  V  K  *  R  A  Q  G  *  V  W  E  L  F  Q  M  K  N  L  V  S  L  P  I  S  T  S  L  P  L  R  I  S  D  S  L  S  K  S  M  T  T  F  T  A  T  S  T  S  T  R :   S  T  *  S  S  L  T  Q  N  N  F  K   : G  F  V  I  L  N  N  *  :  V  *  H  T  W  S  I  Q  E  Q  C  I  L  D  L  S  I  P  L  E  C  I  G  L  P  M  K  L  S  I  S  L  K  P  T  K :   V  W  S  L  E  L  I  T  L  I  Y  K  Q  *  N  L  Q  :  V  F  Y  M  I  L  D  M  D  L  L  A  T  C  L  N  A  S  F  F  L  K  F  A  M  D  W  T   : G  L  M  S  K  C  L  W  T  *  L  I  T  L  L  M  S  V  V  L  I  L  I  L  E  P  L  K  G  S  R :   K  *  Y  L  L  V  P  S  L  R  *  Q  K :   A  Q  G  R  S  S  S  Y  M  I  L  W  L  M  V  E  M  E  S  M  L  T   : S  L  I  T  L  S  E  I  A  V  R  V  Q  *  D  A  I  F  N  L  R   : G  *  W  K  L  *  E  Y  W  E  M  R  Y  V  I  E  P  K  I  :  I  *  P  S  T  S  Y  L  P  H  E  L  I  Y  T  E  L  F  I  L  T  L  K  *  R :   Q  *  S  L  *  L  *  M  H  *  *  K  Q  M  I  I  Y  T  Y  H  H  I  *  S  I  L  L  N  T  G  R  S  A  W  S  F  C  *  L  Q  P  P  *  F  M  E  P  *  K  *  F  L  C  V  C  G  S  S  *  M  T  P  F  *  K  P  S  R  L  L  Q  T  R  N  *  R  N  L  G  I  *  S  F  V  S  E  G  E  I  C  T  S :   S  V  M  S  M  L  S  Q  E  T  K  *  S  I  S  R  M  S  R  H  M  I  L  S  V  R  R :   K  V  A  V  R  H  L  M  K  R  M  L  L  *  P  M  S  G  *  I  *  H  A  G  G  I  I  R  L  K   : V  S  I  F  S  R :   I  M  K  V  R  R  S  S  L  Y  L  M  I  A  S  A  T  C  C  H  H  H  I  K  I  *  L  *  E  S  T  P  K  S  P  T  W :   W  K  L  F  L  M  H  L  K  I  S  S  *  R  L  M  E  *  K  H  R  F  M  Q  H  L  R  R  K  N  A  V  Y  D  I  S  P  V  I  T  T  K  S  T  V  D  I  C  D  Y  S  I  S  Q  A  T  Y  Y  S  P  F  V  Q  K  S  L  N  D  T  *  K  A  S  Q  E  L  Y  *  S  F  C  R  K  L  L  P  F  T  G  Y  D  N  I  L  R  V  L  S  T  I  S  C  I  L  A  L  L  E  K  W  I  S  W  Y  N  R  L  L  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E02.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="74241" stop="74375"/>
                    <exon start="74467" stop="74619"/>
                    <exon start="75587" stop="75624"/>
                    <exon start="75859" stop="75881"/>
                    <exon start="76747" stop="76853"/>
                    <exon start="76940" stop="76991"/>
                    <exon start="77078" stop="77162"/>
                    <exon start="77856" stop="77946"/>
                    <exon start="78746" stop="78784"/>
                    <exon start="78982" stop="79049"/>
                    <exon start="79143" stop="79205"/>
                    <exon start="79311" stop="79366"/>
                    <exon start="79447" stop="79520"/>
                    <exon start="79653" stop="79826"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1155</number_coding_nucleotides>
                  <number_encoded_amino_acids>385</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RDFDGTTISLLTFSFPFSCKSNIFFLLLYASCSPLSFSLLSAPQKSGEVESPRVSMGAFSNEELSFSSNFDFASSQDLRFSKQIHDNVHGNIYIDPLYLKFIDTEQFQRLRDLKQLGVTHMVYPGAVHSRFEHSLGVYWLANEAVHKLKTHQGMELGIDHFDIQTVKLAGLLHDIGHGPFSHLFEREFLPQVCNGLDWSHEQMSVDMIDHIVDERRIDIDSGTIKRVKEMILASSKFTLTKSSREKQFLYDIVANGRNGVDVDKFDYIVRDSRACAVGCNFQFERLMETMRVLGDEICYRAKDYLTIHKLFATRADLHRTVYTHAKVKAIELMIVDALVKANDYLHISSHIEHPSQYWKVGMVFLLASTSLIHGTMKIISLCMWK*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E02.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="79827" stop="79928"/>
                    <exon start="80027" stop="80107"/>
                    <exon start="80178" stop="80269"/>
                    <exon start="80408" stop="80423"/>
                    <exon start="80533" stop="80643"/>
                    <exon start="80736" stop="80837"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>501</number_coding_nucleotides>
                  <number_encoded_amino_acids>167</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LDDTILKTIETAPDPELKESRDLILRVRRRDLYQFCNEYAVPRDKIEHFKDVTAHDIVCSQKSSSETLNEEDVAVTNVRIDLTRGRHNPLESIHFFKDYESEEKFSIPDDRISHLLPSSYQDMIVRVYSKKPHLVEAISDAFENFQLKTYGIKAQVHATPEKKKRRV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="79497" e_stop="79520"/>
            <exon e_start="79653" e_stop="79745"/>
            <exon e_start="79827" e_stop="79928"/>
            <exon e_start="80027" e_stop="80088"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.961" acc_prob="0.999" e_score="0.958"/>
          <exon-intron don_prob="0.255" acc_prob="0.978" e_score="1.000"/>
          <exon-intron don_prob="0.873" acc_prob="0.993" e_score="0.961"/>
          <exon-only e_score="0.919"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.958">
            <gDNA_exon_boundary e_start="79497" e_stop="79520" e_length="24"/>
          </exon>
          <intron i_serial="1" don_prob="0.961" acc_prob="0.999">
            <gDNA_intron_boundary i_start="79521" i_stop="79652" i_length="132"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="79653" e_stop="79745" e_length="93"/>
          </exon>
          <intron i_serial="2" don_prob="0.255" acc_prob="0.978">
            <gDNA_intron_boundary i_start="79746" i_stop="79826" i_length="81"/>
          </intron>
          <exon e_serial="3" e_score="0.961">
            <gDNA_exon_boundary e_start="79827" e_stop="79928" e_length="102"/>
          </exon>
          <intron i_serial="3" don_prob="0.873" acc_prob="0.993">
            <gDNA_intron_boundary i_start="79929" i_stop="80026" i_length="98"/>
          </intron>
          <exon e_serial="4" e_score="0.919">
            <gDNA_exon_boundary e_start="80027" e_stop="80088" e_length="62"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79497" stop="79520"/>
              <exon start="79653" stop="79745"/>
              <exon start="79827" stop="79928"/>
              <exon start="80027" stop="80088"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U594466" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTTTATACTCACGCTAAAGTGAAG : GCAATAGAGCTTATGATTGTAGATGCACTAGTGAAAGCAAATGATTATCTACACATATCATCACATATAGAGCATCCTTCTCAATACTGGAAG : TTAGATGACACCATTTTAAAAACCATCGAGACTGCTCCAGACCCGGAACTGAAGGAATCTAGGGATTTGATCCTTCGTGTCCGAAGGAGAGATTTGTACCAG : TTCTGTAATGAGTATGCTGTCCCAAGAGACAAAATAGAGCATTTCAAGGATGTCACGGCACA</gDNA_template>
            <first_frame> V  Y  T  H  A  K  V  K  :  A  I  E  L  M  I  V  D  A  L  V  K  A  N  D  Y  L  H  I  S  S  H  I  E  H  P  S  Q  Y  W  K  :  L  D  D  T  I  L  K  T  I  E  T  A  P  D  P  E  L  K  E  S  R  D  L  I  L  R  V  R  R  R  D  L  Y  Q  :  F  C  N  E  Y  A  V  P  R  D  K  I  E  H  F  K  D  V  T  A   </first_frame>
            <second_frame>  F  I  L  T  L  K  *  R :   Q  *  S  L  *  L  *  M  H  *  *  K  Q  M  I  I  Y  T  Y  H  H  I  *  S  I  L  L  N  T  G  S :   *  M  T  P  F  *  K  P  S  R  L  L  Q  T  R  N  *  R  N  L  G  I  *  S  F  V  S  E  G  E  I  C  T  S :   S  V  M  S  M  L  S  Q  E  T  K  *  S  I  S  R  M  S  R  H  </second_frame>
            <third_frame>   L  Y  S  R  *  S  E   : G  N  R  A  Y  D  C  R  C  T  S  E  S  K  *  L  S  T  H  I  I  T  Y  R  A  S  F  S  I  L  E   : V  R  *  H  H  F  K  N  H  R  D  C  S  R  P  G  T  E  G  I  *  G  F  D  P  S  C  P  K  E  R  F  V  P   : V  L  *  *  V  C  C  P  K  R  Q  N  R  A  F  Q  G  C  H  G  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E02.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="79497" stop="79520"/>
                    <exon start="79653" stop="79745"/>
                    <exon start="79827" stop="79928"/>
                    <exon start="80027" stop="80086"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>279</number_coding_nucleotides>
                  <number_encoded_amino_acids>93</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VYTHAKVKAIELMIVDALVKANDYLHISSHIEHPSQYWKLDDTILKTIETAPDPELKESRDLILRVRRRDLYQFCNEYAVPRDKIEHFKDVTA</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="74317" e_stop="74375"/>
            <exon e_start="74467" e_stop="75624"/>
            <exon e_start="75859" e_stop="76853"/>
            <exon e_start="76940" e_stop="76991"/>
            <exon e_start="77078" e_stop="77162"/>
            <exon e_start="77856" e_stop="78013"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.964" e_score="1.000"/>
          <exon-intron don_prob="0.864" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.983" acc_prob="0.938" e_score="1.000"/>
          <exon-intron don_prob="0.882" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="74317" e_stop="74375" e_length="59"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="74376" i_stop="74466" i_length="91"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="74467" e_stop="75624" e_length="1158"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.964">
            <gDNA_intron_boundary i_start="75625" i_stop="75858" i_length="234"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="75859" e_stop="76853" e_length="995"/>
          </exon>
          <intron i_serial="3" don_prob="0.864" acc_prob="0.996">
            <gDNA_intron_boundary i_start="76854" i_stop="76939" i_length="86"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="76940" e_stop="76991" e_length="52"/>
          </exon>
          <intron i_serial="4" don_prob="0.983" acc_prob="0.938">
            <gDNA_intron_boundary i_start="76992" i_stop="77077" i_length="86"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="77078" e_stop="77162" e_length="85"/>
          </exon>
          <intron i_serial="5" don_prob="0.882" acc_prob="1.000">
            <gDNA_intron_boundary i_start="77163" i_stop="77855" i_length="693"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="77856" e_stop="78013" e_length="158"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="74317" stop="74375"/>
              <exon start="74467" stop="75624"/>
              <exon start="75859" stop="76853"/>
              <exon start="76940" stop="76991"/>
              <exon start="77078" stop="77162"/>
              <exon start="77856" stop="78013"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U571735" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCCTACTCTACGCCAGCTGCTCTCCTCTCTCTTTCTCTCTCCTTTCGGCACCTCAAAAG : AGTGGTGAAGTAGAGAGCCCAAGGGTGAGTATGGGAGCTTTTTCAAATGAAGAACTTAGTTTCTCTTCCAATTTCGACTTCGCTTCCTCTCAGGATCTCAGATTCTCTAAGCAAATCCATGACAACGTTCACGGCAACATCTACATCGACCCGGTATGTTGCTGTCTCTCACTCTCTGCTGGCTAGTTAACTTTCTACATTTCTGTACATGCTTTGCTTATACCTGCACTGTTTGAATTTATAGGTAGTTAGTTTTTCTTTTGTTTTGGTTCTAAGAGCAATCACAAATGTGTATGCTACACTAGTTTTCTGTGCTATCTAATAGCCAAAAGTGTACTACTATTTTAAAGGAAATTGATAACTGTCAATGAGATAAATGAGAATTCAGAGCTATTTTAAGTTGCACTTCATACATTTTTATTATCCACAGTTTTCTATGGGTAAGTCAGTGCCGAAATTGTACTCGCAAATTAGCCAAAATTGTTAACCGTCAGACTGAATAAATGAGTTCAAAACTATTTTGAATATCAATTCATAAATTTTTGTTATCCACAATTTTCTTAAAATTTTTCAACAAATAAAAAAAAAGTTATCTAGAATGCTTGTGACTTCCAATGTTCAAAGAAAAAAGTTATCTAGAACGCTTGTGCCAAAATTTTGATTTTGTTTCATTTAATGAAACATTAGTGACCATGTGACCATAACAATTAACAAGAGAAGATGATTTTTTCTTCATTCATGATTTATTCGAGAAGCATATAAGGTCAAAATTCATAAGTTTGTTTTGCTGGTAAGAATGGATCGATCTTAAAAGAATGATAGCAACAAAGTGTTTTCCCACACTGTCCTTGGTTAACCTGTGACACAATCCTCTTTCAGCTTTCAGGCTAAAACATGTATTTTATCCAATAGATCAATGAGTTGTTATTCGCCCGTATTTATTTATTAGTATGTGATTGTTTACCAGGCAAGAGAGACACTGGGGTGTGGAGGTTACTGTTTTCTCATTGTGATATCAGATCTACACTCTTATTTTCACTATTCTTATACATTTTCTTTAACTTCTTATTGAGAGCTTTGTGCAAACTACTGGAAGTTTATTCTTTTCTGAACTTTGCAGCTCTACTTGAAGTTCATTGACACAGAACAATTTCAAAG : GCTTCGTGATCTTAAACAACTAGGTAAGTTACTATCCTTGTTCCCTATTTGCATACCTGGTCGCAAGCTTGTTTATGCTAGAACATCAAATTTAGCCTTGTGATTCAAAATGGGATATGAAGAAGTTTTCTTATCTATCATCTACGTGTCCGCTGAAATGTGGCATTTAGTTCTTTCATATTGCAAAATTATTACTAGTAAAATGTGGGATGACATAAAAGATGTAACTAACCTGTATTTTATTTGTCTTAATGTGAGTTGTTTTGGTTATCAAAACTATGATAAAATTGATAACTATCTTTGCCTCTTAAATATGTTCTGACATTATCTGCAACTTTCAGCTTCACTTTGTGATTAGCGGTGACACTTGAACGTATAAATAGTCTGTTTCAACTTCAGTGGTATCTAAATTGTGGTTGCATTGGTGACTGTCGTCGGATCCTTGTAAGGTCTTACGATAATTGCAAAGATATCTTGTTTCTTAGTGTCCTATGAAGACATATCTATATAGGTTATTCAAATTCTGGATATTCGTGTAAATGATGACTTAAGAACTCAAAATTAGCTTTTAAAGCCCTGCATGCATATTTCCCATACAAGCCTCTTGCAGAGGCTGAAGCAAGCCCAAGGTTACAAGCCTAGATGCAAGTTACAAAAAGGCTATATGGTCTCCTATTGCTCAATGGGTAAATTTCACCCTCTCTTAAAATGAGATCCATGTTATCTGTTCAAGAAGTTTAAATCATCCATCTTCCAATCAGTACTTGATGCAGCCACTGGCTCTTACTGTTGTGCTCAATGTTGGTGGAAACATTGTAAGTCTAGGAGTTAACAGCCTGGTAGTGGCTTGAATTTGTTACTAATATGAGCTCTTGTATTCACTTTAAGGTGTGACACACATGGTCTATCCAGGAGCAGTGCATTCTAGATTTGAGCATTCCCTTGGAGTGTATTGGCTTGCCAATGAAGCTGTCCATAAGCTTAAAACCCACCAA : GGTATGGAGCTTGGAATTGATCACTTTGATATACAAACAGTGAAACTTGCAG : GTCTTCTACATGATATTGGACATGGACCTTTTAGCCACTTGTTTGAACGCGAGTTTCTTCCTCAAGTTTGCAATGGATTGGACTG : GTCTCATGAGCAAATGTCTGTGGACATGATTGATCACATTGTTGATGAGCGTCGTATTGATATTGATTCTGGAACCATTAAAAGGGTCAAGGTAAGATGAATTATTTTGATTTATGCTAGTTGATATCATACGAGATGAGAATGGTAATTTGCTTATA</gDNA_template>
            <first_frame> S  Y  S  T  P  A  A  L  L  S  L  S  L  S  F  R  H  L  K  R :   V  V  K  *  R  A  Q  G  *  V  W  E  L  F  Q  M  K  N  L  V  S  L  P  I  S  T  S  L  P  L  R  I  S  D  S  L  S  K  S  M  T  T  F  T  A  T  S  T  S  T  R  Y  V  A  V  S  H  S  L  L  A  S  *  L  S  T  F  L  Y  M  L  C  L  Y  L  H  C  L  N  L  *  V  V  S  F  S  F  V  L  V  L  R  A  I  T  N  V  Y  A  T  L  V  F  C  A  I  *  *  P  K  V  Y  Y  Y  F  K  G  N  *  *  L  S  M  R  *  M  R  I  Q  S  Y  F  K  L  H  F  I  H  F  Y  Y  P  Q  F  S  M  G  K  S  V  P  K  L  Y  S  Q  I  S  Q  N  C  *  P  S  D  *  I  N  E  F  K  T  I  L  N  I  N  S  *  I  F  V  I  H  N  F  L  K  I  F  Q  Q  I  K  K  K  L  S  R  M  L  V  T  S  N  V  Q  R  K  K  L  S  R  T  L  V  P  K  F  *  F  C  F  I  *  *  N  I  S  D  H  V  T  I  T  I  N  K  R  R  *  F  F  L  H  S  *  F  I  R  E  A  Y  K  V  K  I  H  K  F  V  L  L  V  R  M  D  R  S  *  K  N  D  S  N  K  V  F  S  H  T  V  L  G  *  P  V  T  Q  S  S  F  S  F  Q  A  K  T  C  I  L  S  N  R  S  M  S  C  Y  S  P  V  F  I  Y  *  Y  V  I  V  Y  Q  A  R  E  T  L  G  C  G  G  Y  C  F  L  I  V  I  S  D  L  H  S  Y  F  H  Y  S  Y  T  F  S  L  T  S  Y  *  E  L  C  A  N  Y  W  K  F  I  L  F  *  T  L  Q  L  Y  L  K  F  I  D  T  E  Q  F  Q  R :   L  R  D  L  K  Q  L  G  K  L  L  S  L  F  P  I  C  I  P  G  R  K  L  V  Y  A  R  T  S  N  L  A  L  *  F  K  M  G  Y  E  E  V  F  L  S  I  I  Y  V  S  A  E  M  W  H  L  V  L  S  Y  C  K  I  I  T  S  K  M  W  D  D  I  K  D  V  T  N  L  Y  F  I  C  L  N  V  S  C  F  G  Y  Q  N  Y  D  K  I  D  N  Y  L  C  L  L  N  M  F  *  H  Y  L  Q  L  S  A  S  L  C  D  *  R  *  H  L  N  V  *  I  V  C  F  N  F  S  G  I  *  I  V  V  A  L  V  T  V  V  G  S  L  *  G  L  T  I  I  A  K  I  S  C  F  L  V  S  Y  E  D  I  S  I  *  V  I  Q  I  L  D  I  R  V  N  D  D  L  R  T  Q  N  *  L  L  K  P  C  M  H  I  S  H  T  S  L  L  Q  R  L  K  Q  A  Q  G  Y  K  P  R  C  K  L  Q  K  G  Y  M  V  S  Y  C  S  M  G  K  F  H  P  L  L  K  *  D  P  C  Y  L  F  K  K  F  K  S  S  I  F  Q  S  V  L  D  A  A  T  G  S  Y  C  C  A  Q  C  W  W  K  H  C  K  S  R  S  *  Q  P  G  S  G  L  N  L  L  L  I  *  A  L  V  F  T  L  R  C  D  T  H  G  L  S  R  S  S  A  F  *  I  *  A  F  P  W  S  V  L  A  C  Q  *  S  C  P  *  A  *  N  P  P   : R  Y  G  A  W  N  *  S  L  *  Y  T  N  S  E  T  C  R :   S  S  T  *  Y  W  T  W  T  F  *  P  L  V  *  T  R  V  S  S  S  S  L  Q  W  I  G  L  :  V  S  *  A  N  V  C  G  H  D  *  S  H  C  *  *  A  S  Y  *  Y  *  F  W  N  H  *  K  G  Q  G  K  M  N  Y  F  D  L  C  *  L  I  S  Y  E  M  R  M  V  I  C  L   </first_frame>
            <second_frame>  P  T  L  R  Q  L  L  S  S  L  F  L  S  P  F  G  T  S  K   : E  W  *  S  R  E  P  K  G  E  Y  G  S  F  F  K  *  R  T  *  F  L  F  Q  F  R  L  R  F  L  S  G  S  Q  I  L  *  A  N  P  *  Q  R  S  R  Q  H  L  H  R  P  G  M  L  L  S  L  T  L  C  W  L  V  N  F  L  H  F  C  T  C  F  A  Y  T  C  T  V  *  I  Y  R  *  L  V  F  L  L  F  W  F  *  E  Q  S  Q  M  C  M  L  H  *  F  S  V  L  S  N  S  Q  K  C  T  T  I  L  K  E  I  D  N  C  Q  *  D  K  *  E  F  R  A  I  L  S  C  T  S  Y  I  F  I  I  H  S  F  L  W  V  S  Q  C  R  N  C  T  R  K  L  A  K  I  V  N  R  Q  T  E  *  M  S  S  K  L  F  *  I  S  I  H  K  F  L  L  S  T  I  F  L  K  F  F  N  K  *  K  K  S  Y  L  E  C  L  *  L  P  M  F  K  E  K  S  Y  L  E  R  L  C  Q  N  F  D  F  V  S  F  N  E  T  L  V  T  M  *  P  *  Q  L  T  R  E  D  D  F  F  F  I  H  D  L  F  E  K  H  I  R  S  K  F  I  S  L  F  C  W  *  E  W  I  D  L  K  R  M  I  A  T  K  C  F  P  T  L  S  L  V  N  L  *  H  N  P  L  S  A  F  R  L  K  H  V  F  Y  P  I  D  Q  *  V  V  I  R  P  Y  L  F  I  S  M  *  L  F  T  R  Q  E  R  H  W  G  V  E  V  T  V  F  S  L  *  Y  Q  I  Y  T  L  I  F  T  I  L  I  H  F  L  *  L  L  I  E  S  F  V  Q  T  T  G  S  L  F  F  S  E  L  C  S  S  T  *  S  S  L  T  Q  N  N  F  K   : G  F  V  I  L  N  N  *  V  S  Y  Y  P  C  S  L  F  A  Y  L  V  A  S  L  F  M  L  E  H  Q  I  *  P  C  D  S  K  W  D  M  K  K  F  S  Y  L  S  S  T  C  P  L  K  C  G  I  *  F  F  H  I  A  K  L  L  L  V  K  C  G  M  T  *  K  M  *  L  T  C  I  L  F  V  L  M  *  V  V  L  V  I  K  T  M  I  K  L  I  T  I  F  A  S  *  I  C  S  D  I  I  C  N  F  Q  L  H  F  V  I  S  G  D  T  *  T  Y  K  *  S  V  S  T  S  V  V  S  K  L  W  L  H  W  *  L  S  S  D  P  C  K  V  L  R  *  L  Q  R  Y  L  V  S  *  C  P  M  K  T  Y  L  Y  R  L  F  K  F  W  I  F  V  *  M  M  T  *  E  L  K  I  S  F  *  S  P  A  C  I  F  P  I  Q  A  S  C  R  G  *  S  K  P  K  V  T  S  L  D  A  S  Y  K  K  A  I  W  S  P  I  A  Q  W  V  N  F  T  L  S  *  N  E  I  H  V  I  C  S  R  S  L  N  H  P  S  S  N  Q  Y  L  M  Q  P  L  A  L  T  V  V  L  N  V  G  G  N  I  V  S  L  G  V  N  S  L  V  V  A  *  I  C  Y  *  Y  E  L  L  Y  S  L  *  G  V  T  H  M  V  Y  P  G  A  V  H  S  R  F  E  H  S  L  G  V  Y  W  L  A  N  E  A  V  H  K  L  K  T  H  Q  :  G  M  E  L  G  I  D  H  F  D  I  Q  T  V  K  L  A   : G  L  L  H  D  I  G  H  G  P  F  S  H  L  F  E  R  E  F  L  P  Q  V  C  N  G  L  D  W :   S  H  E  Q  M  S  V  D  M  I  D  H  I  V  D  E  R  R  I  D  I  D  S  G  T  I  K  R  V  K  V  R  *  I  I  L  I  Y  A  S  *  Y  H  T  R  *  E  W  *  F  A  Y  </second_frame>
            <third_frame>   L  L  Y  A  S  C  S  P  L  S  F  S  L  L  S  A  P  Q  K  :  S  G  E  V  E  S  P  R  V  S  M  G  A  F  S  N  E  E  L  S  F  S  S  N  F  D  F  A  S  S  Q  D  L  R  F  S  K  Q  I  H  D  N  V  H  G  N  I  Y  I  D  P  V  C  C  C  L  S  L  S  A  G  *  L  T  F  Y  I  S  V  H  A  L  L  I  P  A  L  F  E  F  I  G  S  *  F  F  F  C  F  G  S  K  S  N  H  K  C  V  C  Y  T  S  F  L  C  Y  L  I  A  K  S  V  L  L  F  *  R  K  L  I  T  V  N  E  I  N  E  N  S  E  L  F  *  V  A  L  H  T  F  L  L  S  T  V  F  Y  G  *  V  S  A  E  I  V  L  A  N  *  P  K  L  L  T  V  R  L  N  K  *  V  Q  N  Y  F  E  Y  Q  F  I  N  F  C  Y  P  Q  F  S  *  N  F  S  T  N  K  K  K  V  I  *  N  A  C  D  F  Q  C  S  K  K  K  V  I  *  N  A  C  A  K  I  L  I  L  F  H  L  M  K  H  *  *  P  C  D  H  N  N  *  Q  E  K  M  I  F  S  S  F  M  I  Y  S  R  S  I  *  G  Q  N  S  *  V  C  F  A  G  K  N  G  S  I  L  K  E  *  *  Q  Q  S  V  F  P  H  C  P  W  L  T  C  D  T  I  L  F  Q  L  S  G  *  N  M  Y  F  I  Q  *  I  N  E  L  L  F  A  R  I  Y  L  L  V  C  D  C  L  P  G  K  R  D  T  G  V  W  R  L  L  F  S  H  C  D  I  R  S  T  L  L  F  S  L  F  L  Y  I  F  F  N  F  L  L  R  A  L  C  K  L  L  E  V  Y  S  F  L  N  F  A  A  L  L  E  V  H  *  H  R  T  I  S  K  :  A  S  *  S  *  T  T  R  *  V  T  I  L  V  P  Y  L  H  T  W  S  Q  A  C  L  C  *  N  I  K  F  S  L  V  I  Q  N  G  I  *  R  S  F  L  I  Y  H  L  R  V  R  *  N  V  A  F  S  S  F  I  L  Q  N  Y  Y  *  *  N  V  G  *  H  K  R  C  N  *  P  V  F  Y  L  S  *  C  E  L  F  W  L  S  K  L  *  *  N  *  *  L  S  L  P  L  K  Y  V  L  T  L  S  A  T  F  S  F  T  L  *  L  A  V  T  L  E  R  I  N  S  L  F  Q  L  Q  W  Y  L  N  C  G  C  I  G  D  C  R  R  I  L  V  R  S  Y  D  N  C  K  D  I  L  F  L  S  V  L  *  R  H  I  Y  I  G  Y  S  N  S  G  Y  S  C  K  *  *  L  K  N  S  K  L  A  F  K  A  L  H  A  Y  F  P  Y  K  P  L  A  E  A  E  A  S  P  R  L  Q  A  *  M  Q  V  T  K  R  L  Y  G  L  L  L  L  N  G  *  I  S  P  S  L  K  M  R  S  M  L  S  V  Q  E  V  *  I  I  H  L  P  I  S  T  *  C  S  H  W  L  L  L  L  C  S  M  L  V  E  T  L  *  V  *  E  L  T  A  W  *  W  L  E  F  V  T  N  M  S  S  C  I  H  F  K  V  *  H  T  W  S  I  Q  E  Q  C  I  L  D  L  S  I  P  L  E  C  I  G  L  P  M  K  L  S  I  S  L  K  P  T  K :   V  W  S  L  E  L  I  T  L  I  Y  K  Q  *  N  L  Q  :  V  F  Y  M  I  L  D  M  D  L  L  A  T  C  L  N  A  S  F  F  L  K  F  A  M  D  W  T   : G  L  M  S  K  C  L  W  T  *  L  I  T  L  L  M  S  V  V  L  I  L  I  L  E  P  L  K  G  S  R  *  D  E  L  F  *  F  M  L  V  D  I  I  R  D  E  N  G  N  L  L  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E02.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="76746" stop="76853"/>
                    <exon start="76940" stop="76991"/>
                    <exon start="77078" stop="77162"/>
                    <exon start="77856" stop="77955"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>342</number_coding_nucleotides>
                  <number_encoded_amino_acids>114</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GVTHMVYPGAVHSRFEHSLGVYWLANEAVHKLKTHQGMELGIDHFDIQTVKLAGLLHDIGHGPFSHLFEREFLPQVCNGLDWSHEQMSVDMIDHIVDERRIDIDSGTIKRVKVR*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E02.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="3" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="74319" stop="74375"/>
                    <exon start="74467" stop="74652"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>240</number_coding_nucleotides>
                  <number_encoded_amino_acids>80</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLYASCSPLSFSLLSAPQKSGEVESPRVSMGAFSNEELSFSSNFDFASSQDLRFSKQIHDNVHGNIYIDPVCCCLSLSAG*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E02.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="3" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="75379" stop="75606"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>225</number_coding_nucleotides>
                  <number_encoded_amino_acids>75</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>INELLFARIYLLVCDCLPGKRDTGVWRLLFSHCDIRSTLLFSLFLYIFFNFLLRALCKLLEVYSFLNFAALLEVH*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E02.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="3" PPS_serial="4"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="75962" stop="76180"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>216</number_coding_nucleotides>
                  <number_encoded_amino_acids>72</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FKMGYEEVFLSIIYVSAEMWHLVLSYCKIITSKMWDDIKDVTNLYFICLNVSCFGYQNYDKIDNYLCLLNMF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="85799" PGL_stop="82048"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="85799" e_stop="85435"/>
            <exon e_start="85118" e_stop="84828"/>
            <exon e_start="84718" e_stop="84519"/>
            <exon e_start="83898" e_stop="83630"/>
            <exon e_start="83244" e_stop="83102"/>
            <exon e_start="82576" e_stop="82505"/>
            <exon e_start="82402" e_stop="82048"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.969" e_score="0.997"/>
          <exon-intron don_prob="0.997" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.879" e_score="1.000"/>
          <exon-intron don_prob="0.971" acc_prob="1.000" e_score="0.996"/>
          <exon-intron don_prob="0.993" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="0.968" e_score="1.000"/>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="85799" e_stop="85435" e_length="365"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.969">
            <gDNA_intron_boundary i_start="85434" i_stop="85119" i_length="316"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="85118" e_stop="84828" e_length="291"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.990">
            <gDNA_intron_boundary i_start="84827" i_stop="84719" i_length="109"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="84718" e_stop="84519" e_length="200"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.879">
            <gDNA_intron_boundary i_start="84518" i_stop="83899" i_length="620"/>
          </intron>
          <exon e_serial="4" e_score="0.996">
            <gDNA_exon_boundary e_start="83898" e_stop="83630" e_length="269"/>
          </exon>
          <intron i_serial="4" don_prob="0.971" acc_prob="1.000">
            <gDNA_intron_boundary i_start="83629" i_stop="83245" i_length="385"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="83244" e_stop="83102" e_length="143"/>
          </exon>
          <intron i_serial="5" don_prob="0.993" acc_prob="0.991">
            <gDNA_intron_boundary i_start="83101" i_stop="82577" i_length="525"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="82576" e_stop="82505" e_length="72"/>
          </exon>
          <intron i_serial="6" don_prob="0.987" acc_prob="0.968">
            <gDNA_intron_boundary i_start="82504" i_stop="82403" i_length="102"/>
          </intron>
          <exon e_serial="7" e_score="0.994">
            <gDNA_exon_boundary e_start="82402" e_stop="82048" e_length="355"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85799" stop="85435"/>
              <exon start="85118" stop="84828"/>
              <exon start="84718" stop="84519"/>
              <exon start="83898" stop="83630"/>
              <exon start="83244" stop="83102"/>
              <exon start="82576" stop="82505"/>
              <exon start="82402" stop="82048"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U573199" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCTCTGGTATTCCAATTTTATCCTTATCTCTTTCTACTCTCCTCCTGTCCATTACACCTATTTTCAATCTCAATTTCTTCATTAATAACAGTTGCATTTTGTCAATTTTTTTCCCTCCAAACCCCAAATGTCCTCTAGAATTGCTTGACTGTGTAAACAAACTAGTTGTAAATTCATCAATGGCAGCATCTGTTTCCTGCCACTATTTTTCTTCCCCATTAACAACTTCCACCAAATCCATCAAGCCTAAGCTCAATTACAGCCATTTCGCACCTGCTCTTAGTAAAGGATCGATCCGCCATTTTGTTCCACTATGTTCTTCACAACGCTCGCTTCCTTCTGAATCGGAATGCCAAGACAAAGAG : AAAGATTGGTTTTTGTCATTGAAGAAATGTGCAGCTGCAGTAGCATTGTCGGTTAGTTTGATTAGTGGACTACCTGGATCGCAATGGTTGGGTCCTGCTCATGCGAGCACCCCAGCATTGCCAGATGTCTCTGTATTGATCTCAGGGCCACCAATTAAGGATCCAGGGGCGTTATTGAGGTATGCATTGCCTATAGACAACAAGGCGATAAGAGAAGTCCAAAAACCCCTTGAAGATATTACTGATAGTCTCAAGATTGCTGGTGTCAAGGCGCTTGACTCTGTTGAAAGA : AATACAAGACAAGCATCTCGAGCTCTCAAGGAAGGGAAAACCTTGATTATTTCAGGAGTAGCTAAGTCAAAGACTGACCACGCTATTGAATTGCTAAACAAACTAGAAGCTGGGTTAGGTGAGCTTCAACAAATTGTTGAAGACAGGACTCGAGATGCTGTTGCACCTAAACAGAAGGAATTGCTTAACTATGTTGGAGG : CTGAGATCTTCCTGGGGCATTCGATTTCTGCAGTGTTGAAGAGGATATGGTGGATGGATTCCCATATGAAGTACCTGAAGAATATCAAAATATGCCTTTACTGAAGGGAAGAGCAACTGTGGATATGAAGGTCAAAGTCAAAGACAATCCCAACCTGGAGGAATGCGTATTTCGTATTGTTCTAGATGGATATAATGCTCCAGTTACTGCTGGAAATTTTATAGACTTGGTCGAGAGGCATTTCTATGATGGCATGGATATTCAAAGAG : CGGATGGATTTGTGGTACAAACAGGAGATCCTGAAGGTCCAGCTGAAGGTTTTATTGACCCCAGTACAGAGAAAACCCGGACAGTACCTCTAGAGATTATGGTGGTTGGTGAAAAAGCACCATTCTACGGAGAAACTTTGGAA : GATCTTGGTCTATACAAGGCTCAAACAAGACTACCTTTCAATGCTTTTGGAACAATGGCCATGGCTAGAGAA : GAATTTGAGAATAACTCTGCCTCAAGTCAGGTGTTTTGGTTGTTGAAAGAAAGTGAACTGACTCCTAGCAACGCCAATATATTGGATGGTCGATATGCTGTGTTTGGTTATGTGACAGAAAATGAGGACTTTCTGGCAGATCTGAAGGTGGGAGATGTGATAGAATCAATACAAGTTGTATCTGGCCTCGATAATCTTGTGAATCCAAGCTACAAGATTGCTGGTTAGAGATGTCGTTTAAGTGAGGAATTATCGGAATTAAGACCTACCTGCATTGAGTTGTTCACGAAACTCTCTGAAGAGTATAATCATTATTTTCATCATATATTCAACAATTTCAGTTTCTTGCTTTTGA</gDNA_template>
            <first_frame> S  L  V  F  Q  F  Y  P  Y  L  F  L  L  S  S  C  P  L  H  L  F  S  I  S  I  S  S  L  I  T  V  A  F  C  Q  F  F  S  L  Q  T  P  N  V  L  *  N  C  L  T  V  *  T  N  *  L  *  I  H  Q  W  Q  H  L  F  P  A  T  I  F  L  P  H  *  Q  L  P  P  N  P  S  S  L  S  S  I  T  A  I  S  H  L  L  L  V  K  D  R  S  A  I  L  F  H  Y  V  L  H  N  A  R  F  L  L  N  R  N  A  K  T  K  R :   K  I  G  F  C  H  *  R  N  V  Q  L  Q  *  H  C  R  L  V  *  L  V  D  Y  L  D  R  N  G  W  V  L  L  M  R  A  P  Q  H  C  Q  M  S  L  Y  *  S  Q  G  H  Q  L  R  I  Q  G  R  Y  *  G  M  H  C  L  *  T  T  R  R  *  E  K  S  K  N  P  L  K  I  L  L  I  V  S  R  L  L  V  S  R  R  L  T  L  L  K  E :   I  Q  D  K  H  L  E  L  S  R  K  G  K  P  *  L  F  Q  E  *  L  S  Q  R  L  T  T  L  L  N  C  *  T  N  *  K  L  G  *  V  S  F  N  K  L  L  K  T  G  L  E  M  L  L  H  L  N  R  R  N  C  L  T  M  L  E   : A  E  I  F  L  G  H  S  I  S  A  V  L  K  R  I  W  W  M  D  S  H  M  K  Y  L  K  N  I  K  I  C  L  Y  *  R  E  E  Q  L  W  I  *  R  S  K  S  K  T  I  P  T  W  R  N  A  Y  F  V  L  F  *  M  D  I  M  L  Q  L  L  L  E  I  L  *  T  W  S  R  G  I  S  M  M  A  W  I  F  K  E  :  R  M  D  L  W  Y  K  Q  E  I  L  K  V  Q  L  K  V  L  L  T  P  V  Q  R  K  P  G  Q  Y  L  *  R  L  W  W  L  V  K  K  H  H  S  T  E  K  L  W  K :   I  L  V  Y  T  R  L  K  Q  D  Y  L  S  M  L  L  E  Q  W  P  W  L  E  K :   N  L  R  I  T  L  P  Q  V  R  C  F  G  C  *  K  K  V  N  *  L  L  A  T  P  I  Y  W  M  V  D  M  L  C  L  V  M  *  Q  K  M  R  T  F  W  Q  I  *  R  W  E  M  *  *  N  Q  Y  K  L  Y  L  A  S  I  I  L  *  I  Q  A  T  R  L  L  V  R  D  V  V  *  V  R  N  Y  R  N  *  D  L  P  A  L  S  C  S  R  N  S  L  K  S  I  I  I  I  F  I  I  Y  S  T  I  S  V  S  C  F  * </first_frame>
            <second_frame>  L  W  Y  S  N  F  I  L  I  S  F  Y  S  P  P  V  H  Y  T  Y  F  Q  S  Q  F  L  H  *  *  Q  L  H  F  V  N  F  F  P  S  K  P  Q  M  S  S  R  I  A  *  L  C  K  Q  T  S  C  K  F  I  N  G  S  I  C  F  L  P  L  F  F  F  P  I  N  N  F  H  Q  I  H  Q  A  *  A  Q  L  Q  P  F  R  T  C  S  *  *  R  I  D  P  P  F  C  S  T  M  F  F  T  T  L  A  S  F  *  I  G  M  P  R  Q  R   : E  R  L  V  F  V  I  E  E  M  C  S  C  S  S  I  V  G  *  F  D  *  W  T  T  W  I  A  M  V  G  S  C  S  C  E  H  P  S  I  A  R  C  L  C  I  D  L  R  A  T  N  *  G  S  R  G  V  I  E  V  C  I  A  Y  R  Q  Q  G  D  K  R  S  P  K  T  P  *  R  Y  Y  *  *  S  Q  D  C  W  C  Q  G  A  *  L  C  *  K   : K  Y  K  T  S  I  S  S  S  Q  G  R  E  N  L  D  Y  F  R  S  S  *  V  K  D  *  P  R  Y  *  I  A  K  Q  T  R  S  W  V  R  *  A  S  T  N  C  *  R  Q  D  S  R  C  C  C  T  *  T  E  G  I  A  *  L  C  W  R  :  L  R  S  S  W  G  I  R  F  L  Q  C  *  R  G  Y  G  G  W  I  P  I  *  S  T  *  R  I  S  K  Y  A  F  T  E  G  K  S  N  C  G  Y  E  G  Q  S  Q  R  Q  S  Q  P  G  G  M  R  I  S  Y  C  S  R  W  I  *  C  S  S  Y  C  W  K  F  Y  R  L  G  R  E  A  F  L  *  W  H  G  Y  S  K  S :   G  W  I  C  G  T  N  R  R  S  *  R  S  S  *  R  F  Y  *  P  Q  Y  R  E  N  P  D  S  T  S  R  D  Y  G  G  W  *  K  S  T  I  L  R  R  N  F  G   : R  S  W  S  I  Q  G  S  N  K  T  T  F  Q  C  F  W  N  N  G  H  G  *  R   : R  I  *  E  *  L  C  L  K  S  G  V  L  V  V  E  R  K  *  T  D  S  *  Q  R  Q  Y  I  G  W  S  I  C  C  V  W  L  C  D  R  K  *  G  L  S  G  R  S  E  G  G  R  C  D  R  I  N  T  S  C  I  W  P  R  *  S  C  E  S  K  L  Q  D  C  W  L  E  M  S  F  K  *  G  I  I  G  I  K  T  Y  L  H  *  V  V  H  E  T  L  *  R  V  *  S  L  F  S  S  Y  I  Q  Q  F  Q  F  L  A  F   </second_frame>
            <third_frame>   S  G  I  P  I  L  S  L  S  L  S  T  L  L  L  S  I  T  P  I  F  N  L  N  F  F  I  N  N  S  C  I  L  S  I  F  F  P  P  N  P  K  C  P  L  E  L  L  D  C  V  N  K  L  V  V  N  S  S  M  A  A  S  V  S  C  H  Y  F  S  S  P  L  T  T  S  T  K  S  I  K  P  K  L  N  Y  S  H  F  A  P  A  L  S  K  G  S  I  R  H  F  V  P  L  C  S  S  Q  R  S  L  P  S  E  S  E  C  Q  D  K  E  :  K  D  W  F  L  S  L  K  K  C  A  A  A  V  A  L  S  V  S  L  I  S  G  L  P  G  S  Q  W  L  G  P  A  H  A  S  T  P  A  L  P  D  V  S  V  L  I  S  G  P  P  I  K  D  P  G  A  L  L  R  Y  A  L  P  I  D  N  K  A  I  R  E  V  Q  K  P  L  E  D  I  T  D  S  L  K  I  A  G  V  K  A  L  D  S  V  E  R  :  N  T  R  Q  A  S  R  A  L  K  E  G  K  T  L  I  I  S  G  V  A  K  S  K  T  D  H  A  I  E  L  L  N  K  L  E  A  G  L  G  E  L  Q  Q  I  V  E  D  R  T  R  D  A  V  A  P  K  Q  K  E  L  L  N  Y  V  G  G :   *  D  L  P  G  A  F  D  F  C  S  V  E  E  D  M  V  D  G  F  P  Y  E  V  P  E  E  Y  Q  N  M  P  L  L  K  G  R  A  T  V  D  M  K  V  K  V  K  D  N  P  N  L  E  E  C  V  F  R  I  V  L  D  G  Y  N  A  P  V  T  A  G  N  F  I  D  L  V  E  R  H  F  Y  D  G  M  D  I  Q  R   : A  D  G  F  V  V  Q  T  G  D  P  E  G  P  A  E  G  F  I  D  P  S  T  E  K  T  R  T  V  P  L  E  I  M  V  V  G  E  K  A  P  F  Y  G  E  T  L  E  :  D  L  G  L  Y  K  A  Q  T  R  L  P  F  N  A  F  G  T  M  A  M  A  R  E  :  E  F  E  N  N  S  A  S  S  Q  V  F  W  L  L  K  E  S  E  L  T  P  S  N  A  N  I  L  D  G  R  Y  A  V  F  G  Y  V  T  E  N  E  D  F  L  A  D  L  K  V  G  D  V  I  E  S  I  Q  V  V  S  G  L  D  N  L  V  N  P  S  Y  K  I  A  G  *  R  C  R  L  S  E  E  L  S  E  L  R  P  T  C  I  E  L  F  T  K  L  S  E  E  Y  N  H  Y  F  H  H  I  F  N  N  F  S  F  L  L  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E02.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="85797" stop="85435"/>
                    <exon start="85118" stop="84828"/>
                    <exon start="84718" stop="84519"/>
                    <exon start="83898" stop="83895"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>855</number_coding_nucleotides>
                  <number_encoded_amino_acids>285</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SGIPILSLSLSTLLLSITPIFNLNFFINNSCILSIFFPPNPKCPLELLDCVNKLVVNSSMAASVSCHYFSSPLTTSTKSIKPKLNYSHFAPALSKGSIRHFVPLCSSQRSLPSESECQDKEKDWFLSLKKCAAAVALSVSLISGLPGSQWLGPAHASTPALPDVSVLISGPPIKDPGALLRYALPIDNKAIREVQKPLEDITDSLKIAGVKALDSVERNTRQASRALKEGKTLIISGVAKSKTDHAIELLNKLEAGLGELQQIVEDRTRDAVAPKQKELLNYVGG*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E02.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="83894" stop="83630"/>
                    <exon start="83244" stop="83102"/>
                    <exon start="82576" stop="82505"/>
                    <exon start="82402" stop="82175"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>705</number_coding_nucleotides>
                  <number_encoded_amino_acids>235</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DLPGAFDFCSVEEDMVDGFPYEVPEEYQNMPLLKGRATVDMKVKVKDNPNLEECVFRIVLDGYNAPVTAGNFIDLVERHFYDGMDIQRADGFVVQTGDPEGPAEGFIDPSTEKTRTVPLEIMVVGEKAPFYGETLEDLGLYKAQTRLPFNAFGTMAMAREEFENNSASSQVFWLLKESELTPSNANILDGRYAVFGYVTENEDFLADLKVGDVIESIQVVSGLDNLVNPSYKIAG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="83547" PGL_stop="84127"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="83547" e_stop="83744"/>
            <exon e_start="83825" e_stop="84127"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.794" acc_prob="0.917" e_score="0.990"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.990">
            <gDNA_exon_boundary e_start="83547" e_stop="83744" e_length="198"/>
          </exon>
          <intron i_serial="1" don_prob="0.794" acc_prob="0.917">
            <gDNA_intron_boundary i_start="83745" i_stop="83824" i_length="80"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="83825" e_stop="84127" e_length="303"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83547" stop="83744"/>
              <exon start="83825" stop="84127"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U588554" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CGGACAACATTCCTTGTTTGATGCATAGACAGTTTTATTTGTTTCATTGATTCGCAAGAACAGAGCAAAAATCATAAGCTCACCTCTTTGAATATCCATGCCATCATAGAAATGCCTCTCGACCAAGTCTATAAAATTTCCAGCAGTAACTGGAGCATTATATCCATCTAGAACAATACGAAATACGCATTCCTCCAG : GTACTTCATATGGGAATCCATCCACCATATCCTCTTCAACACTGCAGAAATCGAATGCCCCAGGAAGATCTCAGCTGCAGTCAATGACAAGGGGTCTAAATGAGAAAGGCATAACTTTGGAAATTCACCATTTTTAAAAGTTTTCATCACTCTTCACTTTCTATTCATAGAATTGGTCCATAGTCAACAAAAAATCTTATTTTGGTATTCAAACTGGAATAAGTAGCCTACTTAAACATGCATCCGTCCAATGACACTTCTGTGCTTCTGTGGCATAAATTCTACCAAAGCAATTGCTTTGTG</gDNA_template>
            <first_frame> R  T  T  F  L  V  *  C  I  D  S  F  I  C  F  I  D  S  Q  E  Q  S  K  N  H  K  L  T  S  L  N  I  H  A  I  I  E  M  P  L  D  Q  V  Y  K  I  S  S  S  N  W  S  I  I  S  I  *  N  N  T  K  Y  A  F  L  Q  :  V  L  H  M  G  I  H  P  P  Y  P  L  Q  H  C  R  N  R  M  P  Q  E  D  L  S  C  S  Q  *  Q  G  V  *  M  R  K  A  *  L  W  K  F  T  I  F  K  S  F  H  H  S  S  L  S  I  H  R  I  G  P  *  S  T  K  N  L  I  L  V  F  K  L  E  *  V  A  Y  L  N  M  H  P  S  N  D  T  S  V  L  L  W  H  K  F  Y  Q  S  N  C  F  V </first_frame>
            <second_frame>  G  Q  H  S  L  F  D  A  *  T  V  L  F  V  S  L  I  R  K  N  R  A  K  I  I  S  S  P  L  *  I  S  M  P  S  *  K  C  L  S  T  K  S  I  K  F  P  A  V  T  G  A  L  Y  P  S  R  T  I  R  N  T  H  S  S  R :   Y  F  I  W  E  S  I  H  H  I  L  F  N  T  A  E  I  E  C  P  R  K  I  S  A  A  V  N  D  K  G  S  K  *  E  R  H  N  F  G  N  S  P  F  L  K  V  F  I  T  L  H  F  L  F  I  E  L  V  H  S  Q  Q  K  I  L  F  W  Y  S  N  W  N  K  *  P  T  *  T  C  I  R  P  M  T  L  L  C  F  C  G  I  N  S  T  K  A  I  A  L   </second_frame>
            <third_frame>   D  N  I  P  C  L  M  H  R  Q  F  Y  L  F  H  *  F  A  R  T  E  Q  K  S  *  A  H  L  F  E  Y  P  C  H  H  R  N  A  S  R  P  S  L  *  N  F  Q  Q  *  L  E  H  Y  I  H  L  E  Q  Y  E  I  R  I  P  P   : G  T  S  Y  G  N  P  S  T  I  S  S  S  T  L  Q  K  S  N  A  P  G  R  S  Q  L  Q  S  M  T  R  G  L  N  E  K  G  I  T  L  E  I  H  H  F  *  K  F  S  S  L  F  T  F  Y  S  *  N  W  S  I  V  N  K  K  S  Y  F  G  I  Q  T  G  I  S  S  L  L  K  H  A  S  V  Q  *  H  F  C  A  S  V  A  *  I  L  P  K  Q  L  L  C  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0236E02.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="101612" PGL_stop="105188"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="101612" e_stop="102155"/>
            <exon e_start="102706" e_stop="102842"/>
            <exon e_start="103291" e_stop="103530"/>
            <exon e_start="104661" e_stop="105181"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="0.998"/>
          <exon-intron don_prob="0.999" acc_prob="0.784" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.990"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="101612" e_stop="102155" e_length="544"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="102156" i_stop="102705" i_length="550"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="102706" e_stop="102842" e_length="137"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.784">
            <gDNA_intron_boundary i_start="102843" i_stop="103290" i_length="448"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="103291" e_stop="103530" e_length="240"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="103531" i_stop="104660" i_length="1130"/>
          </intron>
          <exon e_serial="4" e_score="0.990">
            <gDNA_exon_boundary e_start="104661" e_stop="105181" e_length="521"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101612" stop="102155"/>
              <exon start="102706" stop="102842"/>
              <exon start="103291" stop="103530"/>
              <exon start="104661" stop="105181"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U581823" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAGTCGCAAAATAAACTTACAAAACAGCACATATATATAGAGACAAAATCACATAATACGCCCTCGCCGGAATCTTATTTTCACTGTCGCCGGCCGTTAAAACTTTTTTTTTCTAGTTCGGAGGTCAAATAATTAACCTCCGATCGGAAGAAGTAGTTATTCTAACTGCTTCTATTTAATCTGAAAACGGGAAAACCCCTGAGCTGGTTAAGGTGGATTTCGTGATGGGATTTTGTATTTGTCCTTTGGAAACTCCTGCTAGATTACTGTGGAGTACTAGTTTCTTCCGCCACAAGCTTATGCTCTTCTAAAACTTAGTCAACTCTCTTTTTTCATACACATCCCTGCTAAAAAAGAAGAACTCTGTGCTGGAGTTTTTGTTTTCCTTTTTCTGTTTCGCCGGAAACATATAAATAATCTTCTGTGTGTAAATAGGCGATTTTCCAGATAGTTGAAAATATGGGATCTGGGCATATATTTTTCGACCCGTCGTCGTGTCACGGCAACATGCTGTTCCTTGGGAGCGGAGATCCTGTTTTCCGAG : GACCAAGATCGACGATGATGAAGATGGAGGACTCCTCGAAGAGGCGACCCTTCTTTAGCTCGCCGGAGGATCTATATGACGAGGAATACTACGACGAGCAGTCACCGGAGAAGAAGCGCCGTCTCACTCCTGAGCAG : GTGCACTTGTTGGAGAAGAGCTTTGAGACAGAAAACAAGCTGGAGCCCGAGCGCAAAACCCAGCTGGCCAAAAAGCTGGGGCTGCAGCCCAGACAGGTGGCTGTATGGTTCCAAAACCGCCGTGCCCGGTGGAAGACCAAGCAGCTCGAGAGGGATTATGATCAGCTCAAATCCTCTTATGACTCCCTTCTCTCTGATTTTGACTCCGTTCGCAAAGATAACGATAAGCTCAAATCTGAG : GTTGTTTCATTGATGGAAAAGTTACAGGGGAAAGTGGTTGGAGGAGCAGGGGGAAATGAAAAATCTGACATCTTGGAGGTGGATGCTATGACGATCCTTCAAGTGAAGGTGAAGGCTGAGGACCGGTTGAGCAGTGGCAGTGGTGGGAGCGCGGTGGTAGATGAGCATAGTCCACAGCTGGTGGACAGTGGGGACTCATATTTTCACACTGATCATGAGGAGTATCCAGGGCCTGGAGGATGCAATGTTCCTCCACCCATGGATGGTTTACAATCGGAGGAAGATGATGGTAGTGATGATCATGGCAGTTGCCATGGCTACTTCTCTAACGTCTTTGTGGCAGAAGAGCAGCACCATGAACAAGGAGAAGAGCCTATTGGATGGTTCTGGTCTTAATTGAATTTTAGAATATTATATTACAGTTTTTCTTATCTACGCGCGCTTTGTATGATGAAATAAGTGTCGTAATTCCAACTTCTTATTTAAACATCTATTAATATGCTTTTGCAGCTTTTATTCTC</gDNA_template>
            <first_frame> *  S  Q  N  K  L  T  K  Q  H  I  Y  I  E  T  K  S  H  N  T  P  S  P  E  S  Y  F  H  C  R  R  P  L  K  L  F  F  S  S  S  E  V  K  *  L  T  S  D  R  K  K  *  L  F  *  L  L  L  F  N  L  K  T  G  K  P  L  S  W  L  R  W  I  S  *  W  D  F  V  F  V  L  W  K  L  L  L  D  Y  C  G  V  L  V  S  S  A  T  S  L  C  S  S  K  T  *  S  T  L  F  F  H  T  H  P  C  *  K  R  R  T  L  C  W  S  F  C  F  P  F  S  V  S  P  E  T  Y  K  *  S  S  V  C  K  *  A  I  F  Q  I  V  E  N  M  G  S  G  H  I  F  F  D  P  S  S  C  H  G  N  M  L  F  L  G  S  G  D  P  V  F  R   : G  P  R  S  T  M  M  K  M  E  D  S  S  K  R  R  P  F  F  S  S  P  E  D  L  Y  D  E  E  Y  Y  D  E  Q  S  P  E  K  K  R  R  L  T  P  E  Q  :  V  H  L  L  E  K  S  F  E  T  E  N  K  L  E  P  E  R  K  T  Q  L  A  K  K  L  G  L  Q  P  R  Q  V  A  V  W  F  Q  N  R  R  A  R  W  K  T  K  Q  L  E  R  D  Y  D  Q  L  K  S  S  Y  D  S  L  L  S  D  F  D  S  V  R  K  D  N  D  K  L  K  S  E  :  V  V  S  L  M  E  K  L  Q  G  K  V  V  G  G  A  G  G  N  E  K  S  D  I  L  E  V  D  A  M  T  I  L  Q  V  K  V  K  A  E  D  R  L  S  S  G  S  G  G  S  A  V  V  D  E  H  S  P  Q  L  V  D  S  G  D  S  Y  F  H  T  D  H  E  E  Y  P  G  P  G  G  C  N  V  P  P  P  M  D  G  L  Q  S  E  E  D  D  G  S  D  D  H  G  S  C  H  G  Y  F  S  N  V  F  V  A  E  E  Q  H  H  E  Q  G  E  E  P  I  G  W  F  W  S  *  L  N  F  R  I  L  Y  Y  S  F  S  Y  L  R  A  L  C  M  M  K  *  V  S  *  F  Q  L  L  I  *  T  S  I  N  M  L  L  Q  L  L  F   </first_frame>
            <second_frame>  S  R  K  I  N  L  Q  N  S  T  Y  I  *  R  Q  N  H  I  I  R  P  R  R  N  L  I  F  T  V  A  G  R  *  N  F  F  F  L  V  R  R  S  N  N  *  P  P  I  G  R  S  S  Y  S  N  C  F  Y  L  I  *  K  R  E  N  P  *  A  G  *  G  G  F  R  D  G  I  L  Y  L  S  F  G  N  S  C  *  I  T  V  E  Y  *  F  L  P  P  Q  A  Y  A  L  L  K  L  S  Q  L  S  F  F  I  H  I  P  A  K  K  E  E  L  C  A  G  V  F  V  F  L  F  L  F  R  R  K  H  I  N  N  L  L  C  V  N  R  R  F  S  R  *  L  K  I  W  D  L  G  I  Y  F  S  T  R  R  R  V  T  A  T  C  C  S  L  G  A  E  I  L  F  S  E  :  D  Q  D  R  R  *  *  R  W  R  T  P  R  R  G  D  P  S  L  A  R  R  R  I  Y  M  T  R  N  T  T  T  S  S  H  R  R  R  S  A  V  S  L  L  S  R :   C  T  C  W  R  R  A  L  R  Q  K  T  S  W  S  P  S  A  K  P  S  W  P  K  S  W  G  C  S  P  D  R  W  L  Y  G  S  K  T  A  V  P  G  G  R  P  S  S  S  R  G  I  M  I  S  S  N  P  L  M  T  P  F  S  L  I  L  T  P  F  A  K  I  T  I  S  S  N  L  R :   L  F  H  *  W  K  S  Y  R  G  K  W  L  E  E  Q  G  E  M  K  N  L  T  S  W  R  W  M  L  *  R  S  F  K  *  R  *  R  L  R  T  G  *  A  V  A  V  V  G  A  R  W  *  M  S  I  V  H  S  W  W  T  V  G  T  H  I  F  T  L  I  M  R  S  I  Q  G  L  E  D  A  M  F  L  H  P  W  M  V  Y  N  R  R  K  M  M  V  V  M  I  M  A  V  A  M  A  T  S  L  T  S  L  W  Q  K  S  S  T  M  N  K  E  K  S  L  L  D  G  S  G  L  N  *  I  L  E  Y  Y  I  T  V  F  L  I  Y  A  R  F  V  *  *  N  K  C  R  N  S  N  F  L  F  K  H  L  L  I  C  F  C  S  F  Y  S  </second_frame>
            <third_frame>   V  A  K  *  T  Y  K  T  A  H  I  Y  R  D  K  I  T  *  Y  A  L  A  G  I  L  F  S  L  S  P  A  V  K  T  F  F  F  *  F  G  G  Q  I  I  N  L  R  S  E  E  V  V  I  L  T  A  S  I  *  S  E  N  G  K  T  P  E  L  V  K  V  D  F  V  M  G  F  C  I  C  P  L  E  T  P  A  R  L  L  W  S  T  S  F  F  R  H  K  L  M  L  F  *  N  L  V  N  S  L  F  S  Y  T  S  L  L  K  K  K  N  S  V  L  E  F  L  F  S  F  F  C  F  A  G  N  I  *  I  I  F  C  V  *  I  G  D  F  P  D  S  *  K  Y  G  I  W  A  Y  I  F  R  P  V  V  V  S  R  Q  H  A  V  P  W  E  R  R  S  C  F  P  R :   T  K  I  D  D  D  E  D  G  G  L  L  E  E  A  T  L  L  *  L  A  G  G  S  I  *  R  G  I  L  R  R  A  V  T  G  E  E  A  P  S  H  S  *  A   : G  A  L  V  G  E  E  L  *  D  R  K  Q  A  G  A  R  A  Q  N  P  A  G  Q  K  A  G  A  A  A  Q  T  G  G  C  M  V  P  K  P  P  C  P  V  E  D  Q  A  A  R  E  G  L  *  S  A  Q  I  L  L  *  L  P  S  L  *  F  *  L  R  S  Q  R  *  R  *  A  Q  I  *   : G  C  F  I  D  G  K  V  T  G  E  S  G  W  R  S  R  G  K  *  K  I  *  H  L  G  G  G  C  Y  D  D  P  S  S  E  G  E  G  *  G  P  V  E  Q  W  Q  W  W  E  R  G  G  R  *  A  *  S  T  A  G  G  Q  W  G  L  I  F  S  H  *  S  *  G  V  S  R  A  W  R  M  Q  C  S  S  T  H  G  W  F  T  I  G  G  R  *  W  *  *  *  S  W  Q  L  P  W  L  L  L  *  R  L  C  G  R  R  A  A  P  *  T  R  R  R  A  Y  W  M  V  L  V  L  I  E  F  *  N  I  I  L  Q  F  F  L  S  T  R  A  L  Y  D  E  I  S  V  V  I  P  T  S  Y  L  N  I  Y  *  Y  A  F  A  A  F  I  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E02.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="102047" stop="102155"/>
                    <exon start="102706" stop="102842"/>
                    <exon start="103291" stop="103530"/>
                    <exon start="104661" stop="105056"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>879</number_coding_nucleotides>
                  <number_encoded_amino_acids>293</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AIFQIVENMGSGHIFFDPSSCHGNMLFLGSGDPVFRGPRSTMMKMEDSSKRRPFFSSPEDLYDEEYYDEQSPEKKRRLTPEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDQLKSSYDSLLSDFDSVRKDNDKLKSEVVSLMEKLQGKVVGGAGGNEKSDILEVDAMTILQVKVKAEDRLSSGSGGSAVVDEHSPQLVDSGDSYFHTDHEEYPGPGGCNVPPPMDGLQSEEDDGSDDHGSCHGYFSNVFVAEEQHHEQGEEPIGWFWS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="102725" e_stop="103530"/>
            <exon e_start="104661" e_stop="105188"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="102725" e_stop="103530" e_length="806"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="103531" i_stop="104660" i_length="1130"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="104661" e_stop="105188" e_length="528"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102725" stop="103530"/>
              <exon start="104661" stop="105188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U581825" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAAGATGGAGGACTCCTCGAAGAGGCGACCCTTCTTTAGCTCGCCGGAGGATCTATATGACGAGGAATACTACGACGAGCAGTCACCGGAGAAGAAGCGCCGTCTCACTCCTGAGCAGGTTAGCATCCTGTTCCTCCTTTATCTACCCAAAAATATAAATTAAGTAAATGCGTTTTTTTAATAGTTCGATGGAGTAGTTATCAATTCAACATACTGTGACATATATCTCCTAGCTATCAAGATAGTTAAATTTTTTGGTTCAAATCTCACCATCACATATTTTTGGCAATTGGCCACTACATGTGAAACGATTTGTTTAGTCAAATTATAATTAAGTAACTAAAGAAGATTCCCTCTAAAGTGATTTAAGTTTTTAATTATATTGGAACATATTCACCACTATAGCATCAAATTCTTCACAATATCTACCTTTAAACCCTGAAAAGAAGAGAATTTCTTTTTTATCAACGAGCGTTTTCTTTAAGCAAAATTTTATAATTTTGTGGGATTCGATTACTTGCTGAGCAATAAGTGCATGTCCTGCGTTGTTGGGTACGTAAATGAAGGTGCACTTGTTGGAGAAGAGCTTTGAGACAGAAAACAAGCTGGAGCCCGAGCGCAAAACCCAGCTGGCCAAAAAGCTGGGGCTGCAGCCCAGACAGGTGGCTGTATGGTTCCAAAACCGCCGTGCCCGGTGGAAGACCAAGCAGCTCGAGAGGGATTATGATCAGCTCAAATCCTCTTATGACTCCCTTCTCTCTGATTTTGACTCCGTTCGCAAAGATAACGATAAGCTCAAATCTGAG : GTTGTTTCATTGATGGAAAAGTTACAGGGGAAAGTGGTTGGAGGAGCAGGGGGAAATGAAAAATCTGACATCTTGGAGGTGGATGCTATGACGATCCTTCAAGTGAAGGTGAAGGCTGAGGACCGGTTGAGCAGTGGCAGTGGTGGGAGCGCGGTGGTAGATGAGCATAGTCCACAGCTGGTGGACAGTGGGGACTCATATTTTCACACTGATCATGAGGAGTATCCAGGGCCTGGAGGATGCAATGTTCCTCCACCCATGGATGGTTTACAATCGGAGGAAGATGATGGTAGTGATGATCATGGCAGTTGCCATGGCTACTTCTCTAACGTCTTTGTGGCAGAAGAGCAGCACCATGAACAAGGAGAAGAGCCTATTGGATGGTTCTGGTCTTAATTGAATTTTAGAATATTATATTACAGTTTTTCTTATCTACGCGCGCTTTGTATGATGAAATAAGTGTCGTAATTCCAACTTCTTATTTAAACATCTATTAATATGCTTTTGCAGCTTTTATTCTCTTGATTT</gDNA_template>
            <first_frame> E  D  G  G  L  L  E  E  A  T  L  L  *  L  A  G  G  S  I  *  R  G  I  L  R  R  A  V  T  G  E  E  A  P  S  H  S  *  A  G  *  H  P  V  P  P  L  S  T  Q  K  Y  K  L  S  K  C  V  F  L  I  V  R  W  S  S  Y  Q  F  N  I  L  *  H  I  S  P  S  Y  Q  D  S  *  I  F  W  F  K  S  H  H  H  I  F  L  A  I  G  H  Y  M  *  N  D  L  F  S  Q  I  I  I  K  *  L  K  K  I  P  S  K  V  I  *  V  F  N  Y  I  G  T  Y  S  P  L  *  H  Q  I  L  H  N  I  Y  L  *  T  L  K  R  R  E  F  L  F  Y  Q  R  A  F  S  L  S  K  I  L  *  F  C  G  I  R  L  L  A  E  Q  *  V  H  V  L  R  C  W  V  R  K  *  R  C  T  C  W  R  R  A  L  R  Q  K  T  S  W  S  P  S  A  K  P  S  W  P  K  S  W  G  C  S  P  D  R  W  L  Y  G  S  K  T  A  V  P  G  G  R  P  S  S  S  R  G  I  M  I  S  S  N  P  L  M  T  P  F  S  L  I  L  T  P  F  A  K  I  T  I  S  S  N  L  R :   L  F  H  *  W  K  S  Y  R  G  K  W  L  E  E  Q  G  E  M  K  N  L  T  S  W  R  W  M  L  *  R  S  F  K  *  R  *  R  L  R  T  G  *  A  V  A  V  V  G  A  R  W  *  M  S  I  V  H  S  W  W  T  V  G  T  H  I  F  T  L  I  M  R  S  I  Q  G  L  E  D  A  M  F  L  H  P  W  M  V  Y  N  R  R  K  M  M  V  V  M  I  M  A  V  A  M  A  T  S  L  T  S  L  W  Q  K  S  S  T  M  N  K  E  K  S  L  L  D  G  S  G  L  N  *  I  L  E  Y  Y  I  T  V  F  L  I  Y  A  R  F  V  *  *  N  K  C  R  N  S  N  F  L  F  K  H  L  L  I  C  F  C  S  F  Y  S  L  D   </first_frame>
            <second_frame>  K  M  E  D  S  S  K  R  R  P  F  F  S  S  P  E  D  L  Y  D  E  E  Y  Y  D  E  Q  S  P  E  K  K  R  R  L  T  P  E  Q  V  S  I  L  F  L  L  Y  L  P  K  N  I  N  *  V  N  A  F  F  *  *  F  D  G  V  V  I  N  S  T  Y  C  D  I  Y  L  L  A  I  K  I  V  K  F  F  G  S  N  L  T  I  T  Y  F  W  Q  L  A  T  T  C  E  T  I  C  L  V  K  L  *  L  S  N  *  R  R  F  P  L  K  *  F  K  F  L  I  I  L  E  H  I  H  H  Y  S  I  K  F  F  T  I  S  T  F  K  P  *  K  E  E  N  F  F  F  I  N  E  R  F  L  *  A  K  F  Y  N  F  V  G  F  D  Y  L  L  S  N  K  C  M  S  C  V  V  G  Y  V  N  E  G  A  L  V  G  E  E  L  *  D  R  K  Q  A  G  A  R  A  Q  N  P  A  G  Q  K  A  G  A  A  A  Q  T  G  G  C  M  V  P  K  P  P  C  P  V  E  D  Q  A  A  R  E  G  L  *  S  A  Q  I  L  L  *  L  P  S  L  *  F  *  L  R  S  Q  R  *  R  *  A  Q  I  *   : G  C  F  I  D  G  K  V  T  G  E  S  G  W  R  S  R  G  K  *  K  I  *  H  L  G  G  G  C  Y  D  D  P  S  S  E  G  E  G  *  G  P  V  E  Q  W  Q  W  W  E  R  G  G  R  *  A  *  S  T  A  G  G  Q  W  G  L  I  F  S  H  *  S  *  G  V  S  R  A  W  R  M  Q  C  S  S  T  H  G  W  F  T  I  G  G  R  *  W  *  *  *  S  W  Q  L  P  W  L  L  L  *  R  L  C  G  R  R  A  A  P  *  T  R  R  R  A  Y  W  M  V  L  V  L  I  E  F  *  N  I  I  L  Q  F  F  L  S  T  R  A  L  Y  D  E  I  S  V  V  I  P  T  S  Y  L  N  I  Y  *  Y  A  F  A  A  F  I  L  L  I  </second_frame>
            <third_frame>   R  W  R  T  P  R  R  G  D  P  S  L  A  R  R  R  I  Y  M  T  R  N  T  T  T  S  S  H  R  R  R  S  A  V  S  L  L  S  R  L  A  S  C  S  S  F  I  Y  P  K  I  *  I  K  *  M  R  F  F  N  S  S  M  E  *  L  S  I  Q  H  T  V  T  Y  I  S  *  L  S  R  *  L  N  F  L  V  Q  I  S  P  S  H  I  F  G  N  W  P  L  H  V  K  R  F  V  *  S  N  Y  N  *  V  T  K  E  D  S  L  *  S  D  L  S  F  *  L  Y  W  N  I  F  T  T  I  A  S  N  S  S  Q  Y  L  P  L  N  P  E  K  K  R  I  S  F  L  S  T  S  V  F  F  K  Q  N  F  I  I  L  W  D  S  I  T  C  *  A  I  S  A  C  P  A  L  L  G  T  *  M  K  V  H  L  L  E  K  S  F  E  T  E  N  K  L  E  P  E  R  K  T  Q  L  A  K  K  L  G  L  Q  P  R  Q  V  A  V  W  F  Q  N  R  R  A  R  W  K  T  K  Q  L  E  R  D  Y  D  Q  L  K  S  S  Y  D  S  L  L  S  D  F  D  S  V  R  K  D  N  D  K  L  K  S  E  :  V  V  S  L  M  E  K  L  Q  G  K  V  V  G  G  A  G  G  N  E  K  S  D  I  L  E  V  D  A  M  T  I  L  Q  V  K  V  K  A  E  D  R  L  S  S  G  S  G  G  S  A  V  V  D  E  H  S  P  Q  L  V  D  S  G  D  S  Y  F  H  T  D  H  E  E  Y  P  G  P  G  G  C  N  V  P  P  P  M  D  G  L  Q  S  E  E  D  D  G  S  D  D  H  G  S  C  H  G  Y  F  S  N  V  F  V  A  E  E  Q  H  H  E  Q  G  E  E  P  I  G  W  F  W  S  *  L  N  F  R  I  L  Y  Y  S  F  S  Y  L  R  A  L  C  M  M  K  *  V  S  *  F  Q  L  L  I  *  T  S  I  N  M  L  L  Q  L  L  F  S  *  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E02.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="103285" stop="103530"/>
                    <exon start="104661" stop="105056"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>639</number_coding_nucleotides>
                  <number_encoded_amino_acids>213</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MKVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDQLKSSYDSLLSDFDSVRKDNDKLKSEVVSLMEKLQGKVVGGAGGNEKSDILEVDAMTILQVKVKAEDRLSSGSGGSAVVDEHSPQLVDSGDSYFHTDHEEYPGPGGCNVPPPMDGLQSEEDDGSDDHGSCHGYFSNVFVAEEQHHEQGEEPIGWFWS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="101628" e_stop="102155"/>
            <exon e_start="102706" e_stop="102842"/>
            <exon e_start="104661" e_stop="104878"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="0.996"/>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.991"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="101628" e_stop="102155" e_length="528"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="102156" i_stop="102705" i_length="550"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="102706" e_stop="102842" e_length="137"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="102843" i_stop="104660" i_length="1818"/>
          </intron>
          <exon e_serial="3" e_score="0.991">
            <gDNA_exon_boundary e_start="104661" e_stop="104878" e_length="218"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101628" stop="102155"/>
              <exon start="102706" stop="102842"/>
              <exon start="104661" stop="104878"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U581824" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTACAAAACAGCACATATATATAGAGACAAAATCACATAATACGCCCTCGCCGGAATCTTATTTTCACTGTCGCCGGCCGTTAAAACTTTTTTTTTCTAGTTCGGAGGTCAAATAATTAACCTCCGATCGGAAGAAGTAGTTATTCTAACTGCTTCTATTTAATCTGAAAACGGGAAAACCCCTGAGCTGGTTAAGGTGGATTTCGTGATGGGATTTTGTATTTGTCCTTTGGAAACTCCTGCTAGATTACTGTGGAGTACTAGTTTCTTCCGCCACAAGCTTATGCTCTTCTAAAACTTAGTCAACTCTCTTTTTTCATACACATCCCTGCTAAAAAAGAAGAACTCTGTGCTGGAGTTTTTGTTTTCCTTTTTCTGTTTCGCCGGAAACATATAAATAATCTTCTGTGTGTAAATAGGCGATTTTCCAGATAGTTGAAAATATGGGATCTGGGCATATATTTTTCGACCCGTCGTCGTGTCACGGCAACATGCTGTTCCTTGGGAGCGGAGATCCTGTTTTCCGAG : GACCAAGATCGACGATGATGAAGATGGAGGACTCCTCGAAGAGGCGACCCTTCTTTAGCTCGCCGGAGGATCTATATGACGAGGAATACTACGACGAGCAGTCACCGGAGAAGAAGCGCCGTCTCACTCCTGAGCAG : GTTGTTTCATTGATGGAAAAGTTACAGGGGAAAGTGGTTGGAGGAGCAGGGGGAAATGAAAAATCTGACATCTTGGAGGTGGATGCTATGACGATCCTTCAAGTGAAGGTGAAGGCTGAGGACCGGTTGAGCAGTGGCAGTGGTGGGAGCGCGGTGGTAGATGAGCATAGTCCACAGCTGGTGGACAGTGGGGACTCATATTTTCACACTGATCATGA</gDNA_template>
            <first_frame> L  Q  N  S  T  Y  I  *  R  Q  N  H  I  I  R  P  R  R  N  L  I  F  T  V  A  G  R  *  N  F  F  F  L  V  R  R  S  N  N  *  P  P  I  G  R  S  S  Y  S  N  C  F  Y  L  I  *  K  R  E  N  P  *  A  G  *  G  G  F  R  D  G  I  L  Y  L  S  F  G  N  S  C  *  I  T  V  E  Y  *  F  L  P  P  Q  A  Y  A  L  L  K  L  S  Q  L  S  F  F  I  H  I  P  A  K  K  E  E  L  C  A  G  V  F  V  F  L  F  L  F  R  R  K  H  I  N  N  L  L  C  V  N  R  R  F  S  R  *  L  K  I  W  D  L  G  I  Y  F  S  T  R  R  R  V  T  A  T  C  C  S  L  G  A  E  I  L  F  S  E  :  D  Q  D  R  R  *  *  R  W  R  T  P  R  R  G  D  P  S  L  A  R  R  R  I  Y  M  T  R  N  T  T  T  S  S  H  R  R  R  S  A  V  S  L  L  S  R :   L  F  H  *  W  K  S  Y  R  G  K  W  L  E  E  Q  G  E  M  K  N  L  T  S  W  R  W  M  L  *  R  S  F  K  *  R  *  R  L  R  T  G  *  A  V  A  V  V  G  A  R  W  *  M  S  I  V  H  S  W  W  T  V  G  T  H  I  F  T  L  I  M  </first_frame>
            <second_frame>  Y  K  T  A  H  I  Y  R  D  K  I  T  *  Y  A  L  A  G  I  L  F  S  L  S  P  A  V  K  T  F  F  F  *  F  G  G  Q  I  I  N  L  R  S  E  E  V  V  I  L  T  A  S  I  *  S  E  N  G  K  T  P  E  L  V  K  V  D  F  V  M  G  F  C  I  C  P  L  E  T  P  A  R  L  L  W  S  T  S  F  F  R  H  K  L  M  L  F  *  N  L  V  N  S  L  F  S  Y  T  S  L  L  K  K  K  N  S  V  L  E  F  L  F  S  F  F  C  F  A  G  N  I  *  I  I  F  C  V  *  I  G  D  F  P  D  S  *  K  Y  G  I  W  A  Y  I  F  R  P  V  V  V  S  R  Q  H  A  V  P  W  E  R  R  S  C  F  P  R :   T  K  I  D  D  D  E  D  G  G  L  L  E  E  A  T  L  L  *  L  A  G  G  S  I  *  R  G  I  L  R  R  A  V  T  G  E  E  A  P  S  H  S  *  A   : G  C  F  I  D  G  K  V  T  G  E  S  G  W  R  S  R  G  K  *  K  I  *  H  L  G  G  G  C  Y  D  D  P  S  S  E  G  E  G  *  G  P  V  E  Q  W  Q  W  W  E  R  G  G  R  *  A  *  S  T  A  G  G  Q  W  G  L  I  F  S  H  *  S  * </second_frame>
            <third_frame>   T  K  Q  H  I  Y  I  E  T  K  S  H  N  T  P  S  P  E  S  Y  F  H  C  R  R  P  L  K  L  F  F  S  S  S  E  V  K  *  L  T  S  D  R  K  K  *  L  F  *  L  L  L  F  N  L  K  T  G  K  P  L  S  W  L  R  W  I  S  *  W  D  F  V  F  V  L  W  K  L  L  L  D  Y  C  G  V  L  V  S  S  A  T  S  L  C  S  S  K  T  *  S  T  L  F  F  H  T  H  P  C  *  K  R  R  T  L  C  W  S  F  C  F  P  F  S  V  S  P  E  T  Y  K  *  S  S  V  C  K  *  A  I  F  Q  I  V  E  N  M  G  S  G  H  I  F  F  D  P  S  S  C  H  G  N  M  L  F  L  G  S  G  D  P  V  F  R   : G  P  R  S  T  M  M  K  M  E  D  S  S  K  R  R  P  F  F  S  S  P  E  D  L  Y  D  E  E  Y  Y  D  E  Q  S  P  E  K  K  R  R  L  T  P  E  Q  :  V  V  S  L  M  E  K  L  Q  G  K  V  V  G  G  A  G  G  N  E  K  S  D  I  L  E  V  D  A  M  T  I  L  Q  V  K  V  K  A  E  D  R  L  S  S  G  S  G  G  S  A  V  V  D  E  H  S  P  Q  L  V  D  S  G  D  S  Y  F  H  T  D  H   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E02.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="102047" stop="102155"/>
                    <exon start="102706" stop="102842"/>
                    <exon start="104661" stop="104876"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>462</number_coding_nucleotides>
                  <number_encoded_amino_acids>154</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AIFQIVENMGSGHIFFDPSSCHGNMLFLGSGDPVFRGPRSTMMKMEDSSKRRPFFSSPEDLYDEEYYDEQSPEKKRRLTPEQVVSLMEKLQGKVVGGAGGNEKSDILEVDAMTILQVKVKAEDRLSSGSGGSAVVDEHSPQLVDSGDSYFHTDH</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="+" PGL_start="108562" PGL_stop="112652"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="108562" e_stop="108774"/>
            <exon e_start="110228" e_stop="110516"/>
            <exon e_start="110638" e_stop="110744"/>
            <exon e_start="110879" e_stop="111011"/>
            <exon e_start="111114" e_stop="111308"/>
            <exon e_start="112078" e_stop="112652"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.912" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.878" acc_prob="0.849" e_score="1.000"/>
          <exon-intron don_prob="0.949" acc_prob="0.785" e_score="1.000"/>
          <exon-intron don_prob="0.975" acc_prob="0.997" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="108562" e_stop="108774" e_length="213"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.912">
            <gDNA_intron_boundary i_start="108775" i_stop="110227" i_length="1453"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="110228" e_stop="110516" e_length="289"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.985">
            <gDNA_intron_boundary i_start="110517" i_stop="110637" i_length="121"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="110638" e_stop="110744" e_length="107"/>
          </exon>
          <intron i_serial="3" don_prob="0.878" acc_prob="0.849">
            <gDNA_intron_boundary i_start="110745" i_stop="110878" i_length="134"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="110879" e_stop="111011" e_length="133"/>
          </exon>
          <intron i_serial="4" don_prob="0.949" acc_prob="0.785">
            <gDNA_intron_boundary i_start="111012" i_stop="111113" i_length="102"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="111114" e_stop="111308" e_length="195"/>
          </exon>
          <intron i_serial="5" don_prob="0.975" acc_prob="0.997">
            <gDNA_intron_boundary i_start="111309" i_stop="112077" i_length="769"/>
          </intron>
          <exon e_serial="6" e_score="0.998">
            <gDNA_exon_boundary e_start="112078" e_stop="112652" e_length="575"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108562" stop="108774"/>
              <exon start="110228" stop="110516"/>
              <exon start="110638" stop="110744"/>
              <exon start="110879" stop="111011"/>
              <exon start="111114" stop="111308"/>
              <exon start="112078" stop="112652"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U565884" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CCCAATTTTGGTGTGAAATAGCGCCGTCTCATTCTACTGTTCTCGCCGGTTACAAATATCTCTTTTCTACTCTCTCTGTCTATTACTCTTCACTCACTATACACATAAAATCCTCCATTGTTTAGTAGGTTAAAATCTGCTTGTCGTTGAAGAGGAGAGTTCAAAATCATTTCGATTTGCTGCTTTACCCGATCATTTCACCGCATTTTCCTG : ATCTAATCCATATATGATGTCTGAGGAAGCTGCTAGAGATCTCATTCCACTACCTGAAGCTGGGATGAACAATGAGATCCCCAGTAATGGGAGTGTTCCAGCAATAAGGGTTGAGAGCATTGATAAAAATTCAAAAGATAAGGAAAGAGAAAATCCTGCCTTACTGGTTGGACCTTGCCTTAATGGAGACGGTAAGGTGAATACTGGGGCAGAGGTGGGAAATTCTGAAGTGGAATACATAGAATCTGAGAATTTGAATGATGTAGAAGATGTTGACACAAGTCTCAAG : ACACTGTTGACTGGGCTTGACTCCAAGGACTGGGTTTTAGTCTGTGAGGCACTCAATGACGTTCGGCGTCTGTCCCTATTTCACAAAGAAGCAATGGTTGATATGTT : GAGAAATGTGATCTCCCTTGTTGTGAAATCTTTGAAAAATCCGAGAAGTGCTGTTTGTAAGACTGCTATTATGGCATCAGCTGACATTTTCAAAGCATACTGTGACACCATAGTTGACTTGATGGATCCACTG : CTTGTACAACTTCTTCTGAAGTCTTCACAAGACAAGCGATTTGTTTGCGAGGCAGCTGAAAAAGCTCTAAAAGCAATGACAATGTGGGTTTCTCCATCGCTGTTGTTACCGAAGTTGCAACCAAATTTGAAACACAGAAATCCTAGAATTCGAGCAAAAGCTTCAAGCTGCTTTTCTCGAAGTGTACCACGTCTG : GGAGTAGAGGGAATTAAAGCATATGGAATTGAGAACTTGATCCGAATAGCTGCATCGCAGCTCAGTGACCAGCTTCCTGAGTCGAGGGAGGCCGCTCGTTCACTGTTGTTAGAACTGCAAAATATCTACGAAAAAGCATTCAATGTTATCCCCCCACCAGTAGTGAATGAAGACCCAGAAACAATTACCGTGAGTGAGGACCCAGAAACAATATCCTGGGAGCATTTCTGTCAATCAAAGCTCTCACCTTTGAGTGCTCAAGCAGTTCTTCGTGTAACCAATCTCACTAGGGAGGGTATTGTTTTAGGTTCATAGTATTTGTTCAAGCAATGAGCTATAATTCACCATTGTCCTCCATTTTTTGGTTTGGTTTCTTATACCTGTATATACCATGAAAGGTTTCAGGTGTTTGCGAGGCAGTTAGACCATATATAGAGCTATAGTTCTATAGTTTCTTGAAATATGGTTTAGATTACGTTTGCATTATACTTAAAGTCATTCATGAATGCTTGCTTTGCATTGCAGTATACATGTAATTGTGCTCGTTCATTTTTCCCATGGTATGTTAATGATTG</gDNA_template>
            <first_frame> P  N  F  G  V  K  *  R  R  L  I  L  L  F  S  P  V  T  N  I  S  F  L  L  S  L  S  I  T  L  H  S  L  Y  T  *  N  P  P  L  F  S  R  L  K  S  A  C  R  *  R  G  E  F  K  I  I  S  I  C  C  F  T  R  S  F  H  R  I  F  L  :  I  *  S  I  Y  D  V  *  G  S  C  *  R  S  H  S  T  T  *  S  W  D  E  Q  *  D  P  Q  *  W  E  C  S  S  N  K  G  *  E  H  *  *  K  F  K  R  *  G  K  R  K  S  C  L  T  G  W  T  L  P  *  W  R  R  *  G  E  Y  W  G  R  G  G  K  F  *  S  G  I  H  R  I  *  E  F  E  *  C  R  R  C  *  H  K  S  Q   : D  T  V  D  W  A  *  L  Q  G  L  G  F  S  L  *  G  T  Q  *  R  S  A  S  V  P  I  S  Q  R  S  N  G  *  Y  V  :  E  K  C  D  L  P  C  C  E  I  F  E  K  S  E  K  C  C  L  *  D  C  Y  Y  G  I  S  *  H  F  Q  S  I  L  *  H  H  S  *  L  D  G  S  T   : A  C  T  T  S  S  E  V  F  T  R  Q  A  I  C  L  R  G  S  *  K  S  S  K  S  N  D  N  V  G  F  S  I  A  V  V  T  E  V  A  T  K  F  E  T  Q  K  S  *  N  S  S  K  S  F  K  L  L  F  S  K  C  T  T  S   : G  S  R  G  N  *  S  I  W  N  *  E  L  D  P  N  S  C  I  A  A  Q  *  P  A  S  *  V  E  G  G  R  S  F  T  V  V  R  T  A  K  Y  L  R  K  S  I  Q  C  Y  P  P  T  S  S  E  *  R  P  R  N  N  Y  R  E  *  G  P  R  N  N  I  L  G  A  F  L  S  I  K  A  L  T  F  E  C  S  S  S  S  S  C  N  Q  S  H  *  G  G  Y  C  F  R  F  I  V  F  V  Q  A  M  S  Y  N  S  P  L  S  S  I  F  W  F  G  F  L  Y  L  Y  I  P  *  K  V  S  G  V  C  E  A  V  R  P  Y  I  E  L  *  F  Y  S  F  L  K  Y  G  L  D  Y  V  C  I  I  L  K  V  I  H  E  C  L  L  C  I  A  V  Y  M  *  L  C  S  F  I  F  P  M  V  C  *  *  L </first_frame>
            <second_frame>  P  I  L  V  *  N  S  A  V  S  F  Y  C  S  R  R  L  Q  I  S  L  F  Y  S  L  C  L  L  L  F  T  H  Y  T  H  K  I  L  H  C  L  V  G  *  N  L  L  V  V  E  E  E  S  S  K  S  F  R  F  A  A  L  P  D  H  F  T  A  F  S  * :   S  N  P  Y  M  M  S  E  E  A  A  R  D  L  I  P  L  P  E  A  G  M  N  N  E  I  P  S  N  G  S  V  P  A  I  R  V  E  S  I  D  K  N  S  K  D  K  E  R  E  N  P  A  L  L  V  G  P  C  L  N  G  D  G  K  V  N  T  G  A  E  V  G  N  S  E  V  E  Y  I  E  S  E  N  L  N  D  V  E  D  V  D  T  S  L  K  :  T  L  L  T  G  L  D  S  K  D  W  V  L  V  C  E  A  L  N  D  V  R  R  L  S  L  F  H  K  E  A  M  V  D  M  L :   R  N  V  I  S  L  V  V  K  S  L  K  N  P  R  S  A  V  C  K  T  A  I  M  A  S  A  D  I  F  K  A  Y  C  D  T  I  V  D  L  M  D  P  L  :  L  V  Q  L  L  L  K  S  S  Q  D  K  R  F  V  C  E  A  A  E  K  A  L  K  A  M  T  M  W  V  S  P  S  L  L  L  P  K  L  Q  P  N  L  K  H  R  N  P  R  I  R  A  K  A  S  S  C  F  S  R  S  V  P  R  L  :  G  V  E  G  I  K  A  Y  G  I  E  N  L  I  R  I  A  A  S  Q  L  S  D  Q  L  P  E  S  R  E  A  A  R  S  L  L  L  E  L  Q  N  I  Y  E  K  A  F  N  V  I  P  P  P  V  V  N  E  D  P  E  T  I  T  V  S  E  D  P  E  T  I  S  W  E  H  F  C  Q  S  K  L  S  P  L  S  A  Q  A  V  L  R  V  T  N  L  T  R  E  G  I  V  L  G  S  *  Y  L  F  K  Q  *  A  I  I  H  H  C  P  P  F  F  G  L  V  S  Y  T  C  I  Y  H  E  R  F  Q  V  F  A  R  Q  L  D  H  I  *  S  Y  S  S  I  V  S  *  N  M  V  *  I  T  F  A  L  Y  L  K  S  F  M  N  A  C  F  A  L  Q  Y  T  C  N  C  A  R  S  F  F  P  W  Y  V  N  D   </second_frame>
            <third_frame>   Q  F  W  C  E  I  A  P  S  H  S  T  V  L  A  G  Y  K  Y  L  F  S  T  L  S  V  Y  Y  S  S  L  T  I  H  I  K  S  S  I  V  *  *  V  K  I  C  L  S  L  K  R  R  V  Q  N  H  F  D  L  L  L  Y  P  I  I  S  P  H  F  P   : D  L  I  H  I  *  C  L  R  K  L  L  E  I  S  F  H  Y  L  K  L  G  *  T  M  R  S  P  V  M  G  V  F  Q  Q  *  G  L  R  A  L  I  K  I  Q  K  I  R  K  E  K  I  L  P  Y  W  L  D  L  A  L  M  E  T  V  R  *  I  L  G  Q  R  W  E  I  L  K  W  N  T  *  N  L  R  I  *  M  M  *  K  M  L  T  Q  V  S  R :   H  C  *  L  G  L  T  P  R  T  G  F  *  S  V  R  H  S  M  T  F  G  V  C  P  Y  F  T  K  K  Q  W  L  I  C   : *  E  M  *  S  P  L  L  *  N  L  *  K  I  R  E  V  L  F  V  R  L  L  L  W  H  Q  L  T  F  S  K  H  T  V  T  P  *  L  T  *  W  I  H  C :   L  Y  N  F  F  *  S  L  H  K  T  S  D  L  F  A  R  Q  L  K  K  L  *  K  Q  *  Q  C  G  F  L  H  R  C  C  Y  R  S  C  N  Q  I  *  N  T  E  I  L  E  F  E  Q  K  L  Q  A  A  F  L  E  V  Y  H  V  W :   E  *  R  E  L  K  H  M  E  L  R  T  *  S  E  *  L  H  R  S  S  V  T  S  F  L  S  R  G  R  P  L  V  H  C  C  *  N  C  K  I  S  T  K  K  H  S  M  L  S  P  H  Q  *  *  M  K  T  Q  K  Q  L  P  *  V  R  T  Q  K  Q  Y  P  G  S  I  S  V  N  Q  S  S  H  L  *  V  L  K  Q  F  F  V  *  P  I  S  L  G  R  V  L  F  *  V  H  S  I  C  S  S  N  E  L  *  F  T  I  V  L  H  F  L  V  W  F  L  I  P  V  Y  T  M  K  G  F  R  C  L  R  G  S  *  T  I  Y  R  A  I  V  L  *  F  L  E  I  W  F  R  L  R  L  H  Y  T  *  S  H  S  *  M  L  A  L  H  C  S  I  H  V  I  V  L  V  H  F  S  H  G  M  L  M  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E02.1" strand="+"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="110229" stop="110516"/>
                    <exon start="110638" stop="110744"/>
                    <exon start="110879" stop="111011"/>
                    <exon start="111114" stop="111308"/>
                    <exon start="112078" stop="112392"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1035</number_coding_nucleotides>
                  <number_encoded_amino_acids>345</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SNPYMMSEEAARDLIPLPEAGMNNEIPSNGSVPAIRVESIDKNSKDKERENPALLVGPCLNGDGKVNTGAEVGNSEVEYIESENLNDVEDVDTSLKTLLTGLDSKDWVLVCEALNDVRRLSLFHKEAMVDMLRNVISLVVKSLKNPRSAVCKTAIMASADIFKAYCDTIVDLMDPLLVQLLLKSSQDKRFVCEAAEKALKAMTMWVSPSLLLPKLQPNLKHRNPRIRAKASSCFSRSVPRLGVEGIKAYGIENLIRIAASQLSDQLPESREAARSLLLELQNIYEKAFNVIPPPVVNEDPETITVSEDPETISWEHFCQSKLSPLSAQAVLRVTNLTREGIVLGS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="123147" PGL_stop="117468"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="123147" e_stop="123052"/>
            <exon e_start="121369" e_stop="121229"/>
            <exon e_start="121149" e_stop="121012"/>
            <exon e_start="120559" e_stop="120036"/>
            <exon e_start="119816" e_stop="119730"/>
            <exon e_start="119086" e_stop="118913"/>
            <exon e_start="118833" e_stop="118696"/>
            <exon e_start="118415" e_stop="118278"/>
            <exon e_start="118168" e_stop="118107"/>
            <exon e_start="118027" e_stop="117468"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.901" e_score="0.969"/>
          <exon-intron don_prob="0.986" acc_prob="0.750" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.922" e_score="1.000"/>
          <exon-intron don_prob="0.959" acc_prob="0.980" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.933" acc_prob="0.857" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.961" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.920" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.969">
            <gDNA_exon_boundary e_start="123147" e_stop="123052" e_length="96"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.901">
            <gDNA_intron_boundary i_start="123051" i_stop="121370" i_length="1682"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="121369" e_stop="121229" e_length="141"/>
          </exon>
          <intron i_serial="2" don_prob="0.986" acc_prob="0.750">
            <gDNA_intron_boundary i_start="121228" i_stop="121150" i_length="79"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="121149" e_stop="121012" e_length="138"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.922">
            <gDNA_intron_boundary i_start="121011" i_stop="120560" i_length="452"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="120559" e_stop="120036" e_length="524"/>
          </exon>
          <intron i_serial="4" don_prob="0.959" acc_prob="0.980">
            <gDNA_intron_boundary i_start="120035" i_stop="119817" i_length="219"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="119816" e_stop="119730" e_length="87"/>
          </exon>
          <intron i_serial="5" don_prob="0.996" acc_prob="1.000">
            <gDNA_intron_boundary i_start="119729" i_stop="119087" i_length="643"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="119086" e_stop="118913" e_length="174"/>
          </exon>
          <intron i_serial="6" don_prob="0.933" acc_prob="0.857">
            <gDNA_intron_boundary i_start="118912" i_stop="118834" i_length="79"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="118833" e_stop="118696" e_length="138"/>
          </exon>
          <intron i_serial="7" don_prob="0.997" acc_prob="0.996">
            <gDNA_intron_boundary i_start="118695" i_stop="118416" i_length="280"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="118415" e_stop="118278" e_length="138"/>
          </exon>
          <intron i_serial="8" don_prob="0.961" acc_prob="0.997">
            <gDNA_intron_boundary i_start="118277" i_stop="118169" i_length="109"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="118168" e_stop="118107" e_length="62"/>
          </exon>
          <intron i_serial="9" don_prob="0.995" acc_prob="0.920">
            <gDNA_intron_boundary i_start="118106" i_stop="118028" i_length="79"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="118027" e_stop="117468" e_length="560"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="123147" stop="123052"/>
              <exon start="121369" stop="121229"/>
              <exon start="121149" stop="121012"/>
              <exon start="120559" stop="120036"/>
              <exon start="119816" stop="119730"/>
              <exon start="119086" stop="118913"/>
              <exon start="118833" stop="118696"/>
              <exon start="118415" stop="118278"/>
              <exon start="118168" stop="118107"/>
              <exon start="118027" stop="117468"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U584019" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="123145" stop="123052"/>
              <exon start="121369" stop="121306"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U594106" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAGAACAATTTTGAATGCTCTCTCTTTATGTAAACATTATGCTTTGTATGAAATAAAGGTCCTCTAAGATTTCTGTAAGCAACTTTGAAAATTTCT : TTAGGTACTCCAACTACTGGAGAAAGGGTATCAGAAGGTTTTGTAGCAGTGCCGTGGTGCATGAAGAGCCAATCACTCCACCTGTTGAGGTTAAATATAATCAGCTTCTCATTAATGGACAGTTTGTTGATGCAGCCTCAG : GGAAGACATTTCCTACATTTGACCCTCGAACAGGCGAAGCTATTACTACGGTTGCGGAGGCCGACACTGAAGATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAAGGACCATGGCCTAAAATGACTT : GAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGTTAAGAAAATAAGAAAAATGGCGTTATGTTTCCTTTTGACAGTTTAATAACCACTTATTGTATATCAATTGACGTTCTAATGTTTGCTGAATCACCCTAAATGCTTTTCTAAGTATTTCTGCTTACATTTCTTATTCAGGTTGGGCTGATAAAATTCATGGTCTTACAGCTCCTGCTGACAGTTTGCACCATGTTCAGACCCTGCATGAGCCAATTGGTGTTGCAGGACAGATAATACCCTGGAATTTTCCGTTATTAATGTTCGCCTGGAAAGTTGGCCCTGCACTTGCTTGTGGTAACACTGTCGTACTAAAACCAGCAGAACAAACACCACTCTCTGCCCTGTATGTGTCAAAGTTATTCCATGAG : GTTGGACTTCCCCCTGGAGTCTTAAATGTCATTCCTGGATCCGGTAGTGCAGGTGCAGATCTTGCCAGTCATATGGATGTCGATAAG : ATTGCTTTTACAGGGTCCACAGAAACTGGTAAAGCTGTCGTAGGTGCAGCTGCAAAGAGCAACCTAAAACCTGTGACATTGGAGCTCGGAGGAAAATCTCCTTTCATCATTTGTGAAGATGCAGACGTTGATAAAGCTGTTGAGTTGGCTCATTCTGCTGTTTTCTTTAACCAG : GGACAATGCTGCTGTGCTGGATCTCGGACATTCGTACATGAAAGAGTATATGATGAATTTGTGGAGAAAGCCAAAGCTCGTGCTTTAAAACGCATTGTTGGAGACCCTTTCAAGAAGGGAGTTGAACAAGGTCCGCAG : ATTGATACAGAGCAATTTGAGAAGATCCTGAAGTACATAAAATCTGGTACTGAAAGCGGGGCTACTCTCGAGTCTGGAGGGGAAAAATTGGGTTCCAAGGGCTTCTATGTCCAACCTACTGTCTTCTCAAATGTCCAG : GATAACATGCTGATTGCCAGAGATGAGATATTTGGACCAGTGCAGTCCCTCTTGAAATTCAA : GGATGTTGAAGAGGTCATCCGAAGGGCAAACTCGTCACATTATGGGTTGGCAGCGGGTGTTTTTACCCAGAATATAGATGCAGCCAACACAATATCTCGAGCCCTTAGAGTAGGGACAGTGTGGGTTAACTGCTTTAACATCTTTGATGCTGCCATTCCGTTTGGTGGTTATAAGATGAGTGGACATGGAAGAGAGAAGGGAGTCTACAGCCTAAGTAACTACTTGCAAGTCAAAGCTATTGTTACCCCTCTGAAGAATCCAGCATGGCTGTAGTTTTCCCCCCTGCTTTCTGGTACTCCTGAGATGTCGTGCAACACGGCAATCTTGTCTTTTAGAGGTCACTTGTATACAGTGTAGATAAGACCAAAACGCTGTATTGTGTGTGTGTTATTGTTTGTTACTAACTTCTTATGATTTGATAACAATATGCAAACTTGTTTGTGTGAGACCTTTCTTGATTTCTGTAGCTCTGATGCAAAATAGGATCTTGTGTTTGAGTTTTGTGGGAATGTAATGAATTATATATAGATGTAATGTTATAATTCTATATTACTACGGT</gDNA_template>
            <first_frame> Q  N  N  F  E  C  S  L  F  M  *  T  L  C  F  V  *  N  K  G  P  L  R  F  L  *  A  T  L  K  I  S  :  L  G  T  P  T  T  G  E  R  V  S  E  G  F  V  A  V  P  W  C  M  K  S  Q  S  L  H  L  L  R  L  N  I  I  S  F  S  L  M  D  S  L  L  M  Q  P  Q  :  G  R  H  F  L  H  L  T  L  E  Q  A  K  L  L  L  R  L  R  R  P  T  L  K  M  S  T  V  Q  S  L  L  P  V  K  H  L  M  K  D  H  G  L  K  *  L  :  E  R  S  C  I  M  L  Q  F  A  D  L  L  E  R  H  S  D  E  L  A  A  L  E  T  W  D  K  G  K  P  Y  E  Q  A  A  N  E  E  I  P  M  L  I  R  L  F  R  Y  Y  A  G  *  E  N  K  K  N  G  V  M  F  P  F  D  S  L  I  T  T  Y  C  I  S  I  D  V  L  M  F  A  E  S  P  *  M  L  F  *  V  F  L  L  T  F  L  I  Q  V  G  L  I  K  F  M  V  L  Q  L  L  L  T  V  C  T  M  F  R  P  C  M  S  Q  L  V  L  Q  D  R  *  Y  P  G  I  F  R  Y  *  C  S  P  G  K  L  A  L  H  L  L  V  V  T  L  S  Y  *  N  Q  Q  N  K  H  H  S  L  P  C  M  C  Q  S  Y  S  M  R :   L  D  F  P  L  E  S  *  M  S  F  L  D  P  V  V  Q  V  Q  I  L  P  V  I  W  M  S  I  R :   L  L  L  Q  G  P  Q  K  L  V  K  L  S  *  V  Q  L  Q  R  A  T  *  N  L  *  H  W  S  S  E  E  N  L  L  S  S  F  V  K  M  Q  T  L  I  K  L  L  S  W  L  I  L  L  F  S  L  T  R :   D  N  A  A  V  L  D  L  G  H  S  Y  M  K  E  Y  M  M  N  L  W  R  K  P  K  L  V  L  *  N  A  L  L  E  T  L  S  R  R  E  L  N  K  V  R  R :   L  I  Q  S  N  L  R  R  S  *  S  T  *  N  L  V  L  K  A  G  L  L  S  S  L  E  G  K  N  W  V  P  R  A  S  M  S  N  L  L  S  S  Q  M  S  R :   I  T  C  *  L  P  E  M  R  Y  L  D  Q  C  S  P  S  *  N  S   : R  M  L  K  R  S  S  E  G  Q  T  R  H  I  M  G  W  Q  R  V  F  L  P  R  I  *  M  Q  P  T  Q  Y  L  E  P  L  E  *  G  Q  C  G  L  T  A  L  T  S  L  M  L  P  F  R  L  V  V  I  R  *  V  D  M  E  E  R  R  E  S  T  A  *  V  T  T  C  K  S  K  L  L  L  P  L  *  R  I  Q  H  G  C  S  F  P  P  C  F  L  V  L  L  R  C  R  A  T  R  Q  S  C  L  L  E  V  T  C  I  Q  C  R  *  D  Q  N  A  V  L  C  V  C  Y  C  L  L  L  T  S  Y  D  L  I  T  I  C  K  L  V  C  V  R  P  F  L  I  S  V  A  L  M  Q  N  R  I  L  C  L  S  F  V  G  M  *  *  I  I  Y  R  C  N  V  I  I  L  Y  Y  Y  G </first_frame>
            <second_frame>  R  T  I  L  N  A  L  S  L  C  K  H  Y  A  L  Y  E  I  K  V  L  *  D  F  C  K  Q  L  *  K  F  L :   *  V  L  Q  L  L  E  K  G  Y  Q  K  V  L  *  Q  C  R  G  A  *  R  A  N  H  S  T  C  *  G  *  I  *  S  A  S  H  *  W  T  V  C  *  C  S  L  R :   E  D  I  S  Y  I  *  P  S  N  R  R  S  Y  Y  Y  G  C  G  G  R  H  *  R  C  Q  P  C  S  L  C  C  P  *  S  I  *  *  R  T  M  A  *  N  D  L :   K  G  H  V  *  C  C  S  L  L  I  C  L  R  G  T  V  M  N  L  Q  H  L  R  L  G  I  R  E  S  L  T  N  K  L  Q  M  K  K  Y  Q  C  S  F  V  F  S  D  T  M  L  V  K  K  I  R  K  M  A  L  C  F  L  L  T  V  *  *  P  L  I  V  Y  Q  L  T  F  *  C  L  L  N  H  P  K  C  F  S  K  Y  F  C  L  H  F  L  F  R  L  G  *  *  N  S  W  S  Y  S  S  C  *  Q  F  A  P  C  S  D  P  A  *  A  N  W  C  C  R  T  D  N  T  L  E  F  S  V  I  N  V  R  L  E  S  W  P  C  T  C  L  W  *  H  C  R  T  K  T  S  R  T  N  T  T  L  C  P  V  C  V  K  V  I  P  *   : G  W  T  S  P  W  S  L  K  C  H  S  W  I  R  *  C  R  C  R  S  C  Q  S  Y  G  C  R  *   : D  C  F  Y  R  V  H  R  N  W  *  S  C  R  R  C  S  C  K  E  Q  P  K  T  C  D  I  G  A  R  R  K  I  S  F  H  H  L  *  R  C  R  R  *  *  S  C  *  V  G  S  F  C  C  F  L  *  P   : G  T  M  L  L  C  W  I  S  D  I  R  T  *  K  S  I  *  *  I  C  G  E  S  Q  S  S  C  F  K  T  H  C  W  R  P  F  Q  E  G  S  *  T  R  S  A   : D  *  Y  R  A  I  *  E  D  P  E  V  H  K  I  W  Y  *  K  R  G  Y  S  R  V  W  R  G  K  I  G  F  Q  G  L  L  C  P  T  Y  C  L  L  K  C  P   : G  *  H  A  D  C  Q  R  *  D  I  W  T  S  A  V  P  L  E  I  Q  :  G  C  *  R  G  H  P  K  G  K  L  V  T  L  W  V  G  S  G  C  F  Y  P  E  Y  R  C  S  Q  H  N  I  S  S  P  *  S  R  D  S  V  G  *  L  L  *  H  L  *  C  C  H  S  V  W  W  L  *  D  E  W  T  W  K  R  E  G  S  L  Q  P  K  *  L  L  A  S  Q  S  Y  C  Y  P  S  E  E  S  S  M  A  V  V  F  P  P  A  F  W  Y  S  *  D  V  V  Q  H  G  N  L  V  F  *  R  S  L  V  Y  S  V  D  K  T  K  T  L  Y  C  V  C  V  I  V  C  Y  *  L  L  M  I  *  *  Q  Y  A  N  L  F  V  *  D  L  S  *  F  L  *  L  *  C  K  I  G  S  C  V  *  V  L  W  E  C  N  E  L  Y  I  D  V  M  L  *  F  Y  I  T  T   </second_frame>
            <third_frame>   E  Q  F  *  M  L  S  L  Y  V  N  I  M  L  C  M  K  *  R  S  S  K  I  S  V  S  N  F  E  N  F   : F  R  Y  S  N  Y  W  R  K  G  I  R  R  F  C  S  S  A  V  V  H  E  E  P  I  T  P  P  V  E  V  K  Y  N  Q  L  L  I  N  G  Q  F  V  D  A  A  S   : G  K  T  F  P  T  F  D  P  R  T  G  E  A  I  T  T  V  A  E  A  D  T  E  D  V  N  R  A  V  F  A  A  R  K  A  F  D  E  G  P  W  P  K  M  T   : *  K  V  M  Y  N  V  A  V  C  *  F  A  *  E  A  Q  *  *  T  C  S  T  *  D  L  G  *  G  K  A  L  R  T  S  C  K  *  R  N  T  N  A  H  S  S  F  Q  I  L  C  W  L  R  K  *  E  K  W  R  Y  V  S  F  *  Q  F  N  N  H  L  L  Y  I  N  *  R  S  N  V  C  *  I  T  L  N  A  F  L  S  I  S  A  Y  I  S  Y  S  G  W  A  D  K  I  H  G  L  T  A  P  A  D  S  L  H  H  V  Q  T  L  H  E  P  I  G  V  A  G  Q  I  I  P  W  N  F  P  L  L  M  F  A  W  K  V  G  P  A  L  A  C  G  N  T  V  V  L  K  P  A  E  Q  T  P  L  S  A  L  Y  V  S  K  L  F  H  E  :  V  G  L  P  P  G  V  L  N  V  I  P  G  S  G  S  A  G  A  D  L  A  S  H  M  D  V  D  K  :  I  A  F  T  G  S  T  E  T  G  K  A  V  V  G  A  A  A  K  S  N  L  K  P  V  T  L  E  L  G  G  K  S  P  F  I  I  C  E  D  A  D  V  D  K  A  V  E  L  A  H  S  A  V  F  F  N  Q  :  G  Q  C  C  C  A  G  S  R  T  F  V  H  E  R  V  Y  D  E  F  V  E  K  A  K  A  R  A  L  K  R  I  V  G  D  P  F  K  K  G  V  E  Q  G  P  Q  :  I  D  T  E  Q  F  E  K  I  L  K  Y  I  K  S  G  T  E  S  G  A  T  L  E  S  G  G  E  K  L  G  S  K  G  F  Y  V  Q  P  T  V  F  S  N  V  Q  :  D  N  M  L  I  A  R  D  E  I  F  G  P  V  Q  S  L  L  K  F  K :   D  V  E  E  V  I  R  R  A  N  S  S  H  Y  G  L  A  A  G  V  F  T  Q  N  I  D  A  A  N  T  I  S  R  A  L  R  V  G  T  V  W  V  N  C  F  N  I  F  D  A  A  I  P  F  G  G  Y  K  M  S  G  H  G  R  E  K  G  V  Y  S  L  S  N  Y  L  Q  V  K  A  I  V  T  P  L  K  N  P  A  W  L  *  F  S  P  L  L  S  G  T  P  E  M  S  C  N  T  A  I  L  S  F  R  G  H  L  Y  T  V  *  I  R  P  K  R  C  I  V  C  V  L  L  F  V  T  N  F  L  *  F  D  N  N  M  Q  T  C  L  C  E  T  F  L  D  F  C  S  S  D  A  K  *  D  L  V  F  E  F  C  G  N  V  M  N  Y  I  *  M  *  C  Y  N  S  I  L  L  R  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E02.1" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="120314" stop="120036"/>
                    <exon start="119816" stop="119730"/>
                    <exon start="119086" stop="118913"/>
                    <exon start="118833" stop="118696"/>
                    <exon start="118415" stop="118278"/>
                    <exon start="118168" stop="118107"/>
                    <exon start="118027" stop="117754"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1149</number_coding_nucleotides>
                  <number_encoded_amino_acids>383</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ITLNAFLSISAYISYSGWADKIHGLTAPADSLHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTVVLKPAEQTPLSALYVSKLFHEVGLPPGVLNVIPGSGSAGADLASHMDVDKIAFTGSTETGKAVVGAAAKSNLKPVTLELGGKSPFIICEDADVDKAVELAHSAVFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRIVGDPFKKGVEQGPQIDTEQFEKILKYIKSGTESGATLESGGEKLGSKGFYVQPTVFSNVQDNMLIARDEIFGPVQSLLKFKDVEEVIRRANSSHYGLAAGVFTQNIDAANTISRALRVGTVWVNCFNIFDAAIPFGGYKMSGHGREKGVYSLSNYLQVKAIVTPLKNPAWL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E02.1" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="123091" stop="123052"/>
                    <exon start="121369" stop="121229"/>
                    <exon start="121149" stop="121012"/>
                    <exon start="120559" stop="120558"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>318</number_coding_nucleotides>
                  <number_encoded_amino_acids>106</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RSSKISVSNFENFFRYSNYWRKGIRRFCSSAVVHEEPITPPVEVKYNQLLINGQFVDAASGKTFPTFDPRTGEAITTVAEADTEDVNRAVFAARKAFDEGPWPKMT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="122561" e_stop="121763"/>
            <exon e_start="121369" e_stop="121229"/>
            <exon e_start="121149" e_stop="120913"/>
            <exon e_start="120559" e_stop="120300"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.901" e_score="0.997"/>
          <exon-intron don_prob="0.986" acc_prob="0.750" e_score="0.972"/>
          <exon-intron don_prob="0.177" acc_prob="0.922" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="122561" e_stop="121763" e_length="799"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.901">
            <gDNA_intron_boundary i_start="121762" i_stop="121370" i_length="393"/>
          </intron>
          <exon e_serial="2" e_score="0.972">
            <gDNA_exon_boundary e_start="121369" e_stop="121229" e_length="141"/>
          </exon>
          <intron i_serial="2" don_prob="0.986" acc_prob="0.750">
            <gDNA_intron_boundary i_start="121228" i_stop="121150" i_length="79"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="121149" e_stop="120913" e_length="237"/>
          </exon>
          <intron i_serial="3" don_prob="0.177" acc_prob="0.922">
            <gDNA_intron_boundary i_start="120912" i_stop="120560" i_length="353"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="120559" e_stop="120300" e_length="260"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="122561" stop="121763"/>
              <exon start="121369" stop="121229"/>
              <exon start="121149" stop="121028"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U584020" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="121280" stop="121229"/>
              <exon start="121149" stop="120913"/>
              <exon start="120559" stop="120300"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U594107" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCAACTTTTTTCCATGAGTTGATTTCCAAGAAAATGGAAATAACTTTGCCCGCATTGGATCTAACTAACAACTTATTGTTCTACCCAAGTCCAAGAAATCAAAAACAAACCCATATAATGGTAGCGTGGCGGCGGCGCGTCTTCTTCAATGGTTTCCAGGAGAAGGGGAAATAACTTTACCCACATCCGACCCAACTAACAAGTAAACCATCTTTCCCGTTATAGTTCTACCCAGGTCCAAGAAGGCAAATACAAACCCCTCTGGGCGTGGCAGCGGCGCATCTTCTTCCATGTCTTCCAAGAAAAGGGAAAATAACTTTGCCTTTTCCCATCTTCTACAGTTCCCTTAATTTTGCATTTTTTTAGAATCTAACTCAACAGTCCCTTTATGGACTTCATCACTTCTAACCAAACACAAATCCAACTAAGAAGAGATAAAACTCAATAAAATGAATAGCGTCCCAGAGGAAAATCTCAACACCTGAGTAGACATAAAAAAGAATCAACTTAGCAGTTAAATAAAATATCACATCATCAACAGCAGAAGTTGCCGCCTGAATCGCCACGAACCCAACCACAAAAGCAGAGACAAATTTCCCTTGCTGAAAGAATCAGCCCAAATCCACTACATTCTTGTACTGCAATTCCAATTACACTTGCCTCGAAATTGCCGCAAATACAGTAACTTGGTGACTTTTGAGGAAGATGGAAAAATTGATTCTTTTCTATTGGGTGGACAAACTCACCAAGAGTAATTAAAAATAAATATGGTCTGTTTTGAGGTTGAAGTTTAATTCAG : TTAGGTACTCCAACTACTGGAGAAAGGGTATCAGAAGGTTTTGTAGCAGTGCCGTGGTGCATGAAGAGCCAATCACTCCACCTGTTGAGGTTAAATATAATCAGCTTCTCATTAATGGACAGTTTGTTGATGCAGCCTCAG : GGAAGACATTTCCTACATTTGACCCTCGAACAGGCGAAGCTATTACTACGGTTGCGGAGGCCGACACTGAAGATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAAGGACCATGGCCTAAAATGACTTGTGCAGTAACCGAACTTTCTTATCTTTCCATATCCTCTTCCTTGTCCCAACAGTGAGAGGCGGATTTAGAATTTGAACTTAACATGTTCAACCTTTAAG : GAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGTTAAGAAAATAAGAAAAATGGCGTTATGTTTCCTTTTGACAGTTTAATAACCACTTATTGTATATCAATTGACGTTCTAATGTTTGCTGAATCACCCTAAATGCT</gDNA_template>
            <first_frame> A  T  F  F  H  E  L  I  S  K  K  M  E  I  T  L  P  A  L  D  L  T  N  N  L  L  F  Y  P  S  P  R  N  Q  K  Q  T  H  I  M  V  A  W  R  R  R  V  F  F  N  G  F  Q  E  K  G  K  *  L  Y  P  H  P  T  Q  L  T  S  K  P  S  F  P  L  *  F  Y  P  G  P  R  R  Q  I  Q  T  P  L  G  V  A  A  A  H  L  L  P  C  L  P  R  K  G  K  I  T  L  P  F  P  I  F  Y  S  S  L  N  F  A  F  F  *  N  L  T  Q  Q  S  L  Y  G  L  H  H  F  *  P  N  T  N  P  T  K  K  R  *  N  S  I  K  *  I  A  S  Q  R  K  I  S  T  P  E  *  T  *  K  R  I  N  L  A  V  K  *  N  I  T  S  S  T  A  E  V  A  A  *  I  A  T  N  P  T  T  K  A  E  T  N  F  P  C  *  K  N  Q  P  K  S  T  T  F  L  Y  C  N  S  N  Y  T  C  L  E  I  A  A  N  T  V  T  W  *  L  L  R  K  M  E  K  L  I  L  F  Y  W  V  D  K  L  T  K  S  N  *  K  *  I  W  S  V  L  R  L  K  F  N  S   : V  R  Y  S  N  Y  W  R  K  G  I  R  R  F  C  S  S  A  V  V  H  E  E  P  I  T  P  P  V  E  V  K  Y  N  Q  L  L  I  N  G  Q  F  V  D  A  A  S   : G  K  T  F  P  T  F  D  P  R  T  G  E  A  I  T  T  V  A  E  A  D  T  E  D  V  N  R  A  V  F  A  A  R  K  A  F  D  E  G  P  W  P  K  M  T  C  A  V  T  E  L  S  Y  L  S  I  S  S  S  L  S  Q  Q  *  E  A  D  L  E  F  E  L  N  M  F  N  L  *   : G  K  V  M  Y  N  V  A  V  C  *  F  A  *  E  A  Q  *  *  T  C  S  T  *  D  L  G  *  G  K  A  L  R  T  S  C  K  *  R  N  T  N  A  H  S  S  F  Q  I  L  C  W  L  R  K  *  E  K  W  R  Y  V  S  F  *  Q  F  N  N  H  L  L  Y  I  N  *  R  S  N  V  C  *  I  T  L  N  A </first_frame>
            <second_frame>  Q  L  F  S  M  S  *  F  P  R  K  W  K  *  L  C  P  H  W  I  *  L  T  T  Y  C  S  T  Q  V  Q  E  I  K  N  K  P  I  *  W  *  R  G  G  G  A  S  S  S  M  V  S  R  R  R  G  N  N  F  T  H  I  R  P  N  *  Q  V  N  H  L  S  R  Y  S  S  T  Q  V  Q  E  G  K  Y  K  P  L  W  A  W  Q  R  R  I  F  F  H  V  F  Q  E  K  G  K  *  L  C  L  F  P  S  S  T  V  P  L  I  L  H  F  F  R  I  *  L  N  S  P  F  M  D  F  I  T  S  N  Q  T  Q  I  Q  L  R  R  D  K  T  Q  *  N  E  *  R  P  R  G  K  S  Q  H  L  S  R  H  K  K  E  S  T  *  Q  L  N  K  I  S  H  H  Q  Q  Q  K  L  P  P  E  S  P  R  T  Q  P  Q  K  Q  R  Q  I  S  L  A  E  R  I  S  P  N  P  L  H  S  C  T  A  I  P  I  T  L  A  S  K  L  P  Q  I  Q  *  L  G  D  F  *  G  R  W  K  N  *  F  F  S  I  G  W  T  N  S  P  R  V  I  K  N  K  Y  G  L  F  *  G  *  S  L  I  Q  :  L  G  T  P  T  T  G  E  R  V  S  E  G  F  V  A  V  P  W  C  M  K  S  Q  S  L  H  L  L  R  L  N  I  I  S  F  S  L  M  D  S  L  L  M  Q  P  Q  :  G  R  H  F  L  H  L  T  L  E  Q  A  K  L  L  L  R  L  R  R  P  T  L  K  M  S  T  V  Q  S  L  L  P  V  K  H  L  M  K  D  H  G  L  K  *  L  V  Q  *  P  N  F  L  I  F  P  Y  P  L  P  C  P  N  S  E  R  R  I  *  N  L  N  L  T  C  S  T  F  K  :  E  R  S  C  I  M  L  Q  F  A  D  L  L  E  R  H  S  D  E  L  A  A  L  E  T  W  D  K  G  K  P  Y  E  Q  A  A  N  E  E  I  P  M  L  I  R  L  F  R  Y  Y  A  G  *  E  N  K  K  N  G  V  M  F  P  F  D  S  L  I  T  T  Y  C  I  S  I  D  V  L  M  F  A  E  S  P  *  M   </second_frame>
            <third_frame>   N  F  F  P  *  V  D  F  Q  E  N  G  N  N  F  A  R  I  G  S  N  *  Q  L  I  V  L  P  K  S  K  K  S  K  T  N  P  Y  N  G  S  V  A  A  A  R  L  L  Q  W  F  P  G  E  G  E  I  T  L  P  T  S  D  P  T  N  K  *  T  I  F  P  V  I  V  L  P  R  S  K  K  A  N  T  N  P  S  G  R  G  S  G  A  S  S  S  M  S  S  K  K  R  E  N  N  F  A  F  S  H  L  L  Q  F  P  *  F  C  I  F  L  E  S  N  S  T  V  P  L  W  T  S  S  L  L  T  K  H  K  S  N  *  E  E  I  K  L  N  K  M  N  S  V  P  E  E  N  L  N  T  *  V  D  I  K  K  N  Q  L  S  S  *  I  K  Y  H  I  I  N  S  R  S  C  R  L  N  R  H  E  P  N  H  K  S  R  D  K  F  P  L  L  K  E  S  A  Q  I  H  Y  I  L  V  L  Q  F  Q  L  H  L  P  R  N  C  R  K  Y  S  N  L  V  T  F  E  E  D  G  K  I  D  S  F  L  L  G  G  Q  T  H  Q  E  *  L  K  I  N  M  V  C  F  E  V  E  V  *  F  S :   *  V  L  Q  L  L  E  K  G  Y  Q  K  V  L  *  Q  C  R  G  A  *  R  A  N  H  S  T  C  *  G  *  I  *  S  A  S  H  *  W  T  V  C  *  C  S  L  R :   E  D  I  S  Y  I  *  P  S  N  R  R  S  Y  Y  Y  G  C  G  G  R  H  *  R  C  Q  P  C  S  L  C  C  P  *  S  I  *  *  R  T  M  A  *  N  D  L  C  S  N  R  T  F  L  S  F  H  I  L  F  L  V  P  T  V  R  G  G  F  R  I  *  T  *  H  V  Q  P  L  R :   K  G  H  V  *  C  C  S  L  L  I  C  L  R  G  T  V  M  N  L  Q  H  L  R  L  G  I  R  E  S  L  T  N  K  L  Q  M  K  K  Y  Q  C  S  F  V  F  S  D  T  M  L  V  K  K  I  R  K  M  A  L  C  F  L  L  T  V  *  *  P  L  I  V  Y  Q  L  T  F  *  C  L  L  N  H  P  K  C  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E02.1" strand="-"/>
                <serials PGL_serial="13" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="121796" stop="121763"/>
                    <exon start="121369" stop="121229"/>
                    <exon start="121149" stop="120956"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>366</number_coding_nucleotides>
                  <number_encoded_amino_acids>122</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IWSVLRLKFNSVRYSNYWRKGIRRFCSSAVVHEEPITPPVEVKYNQLLINGQFVDAASGKTFPTFDPRTGEAITTVAEADTEDVNRAVFAARKAFDEGPWPKMTCAVTELSYLSISSSLSQQ*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E02.1" strand="-"/>
                <serials PGL_serial="13" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="121774" stop="121763"/>
                    <exon start="121369" stop="121229"/>
                    <exon start="121149" stop="121015"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>285</number_coding_nucleotides>
                  <number_encoded_amino_acids>95</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SLIQLGTPTTGERVSEGFVAVPWCMKSQSLHLLRLNIISFSLMDSLLMQPQGRHFLHLTLEQAKLLLRLRRPTLKMSTVQSLLPVKHLMKDHGLK*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E02.1" strand="-"/>
                <serials PGL_serial="13" AGS_serial="2" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="122043" stop="121807"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>234</number_coding_nucleotides>
                  <number_encoded_amino_acids>78</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IKYHIINSRSCRLNRHEPNHKSRDKFPLLKESAQIHYILVLQFQLHLPRNCRKYSNLVTFEEDGKIDSFLLGGQTHQE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="123145" e_stop="123052"/>
            <exon e_start="121369" e_stop="121229"/>
            <exon e_start="121149" e_stop="121007"/>
            <exon e_start="120559" e_stop="120406"/>
            <exon e_start="120265" e_stop="120036"/>
            <exon e_start="119816" e_stop="119733"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.901" e_score="0.984"/>
          <exon-intron don_prob="0.986" acc_prob="0.750" e_score="1.000"/>
          <exon-intron don_prob="0.793" acc_prob="0.922" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.959" acc_prob="0.980" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.984">
            <gDNA_exon_boundary e_start="123145" e_stop="123052" e_length="94"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.901">
            <gDNA_intron_boundary i_start="123051" i_stop="121370" i_length="1682"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="121369" e_stop="121229" e_length="141"/>
          </exon>
          <intron i_serial="2" don_prob="0.986" acc_prob="0.750">
            <gDNA_intron_boundary i_start="121228" i_stop="121150" i_length="79"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="121149" e_stop="121007" e_length="143"/>
          </exon>
          <intron i_serial="3" don_prob="0.793" acc_prob="0.922">
            <gDNA_intron_boundary i_start="121006" i_stop="120560" i_length="447"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="120559" e_stop="120406" e_length="154"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.997">
            <gDNA_intron_boundary i_start="120405" i_stop="120266" i_length="140"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="120265" e_stop="120036" e_length="230"/>
          </exon>
          <intron i_serial="5" don_prob="0.959" acc_prob="0.980">
            <gDNA_intron_boundary i_start="120035" i_stop="119817" i_length="219"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="119816" e_stop="119733" e_length="84"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="123145" stop="123052"/>
              <exon start="121369" stop="121306"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U594106" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="123115" stop="123052"/>
              <exon start="121369" stop="121229"/>
              <exon start="121149" stop="121007"/>
              <exon start="120559" stop="120406"/>
              <exon start="120265" stop="120036"/>
              <exon start="119816" stop="119733"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U584014" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAACAATTTTGAATGCTCTCTCTTTATGTAAACATTATGCTTTGTATGAAATAAAGGTCCTCTAAGATTTCTGTAAGCAACTTTGAAAATTTCT : TTAGGTACTCCAACTACTGGAGAAAGGGTATCAGAAGGTTTTGTAGCAGTGCCGTGGTGCATGAAGAGCCAATCACTCCACCTGTTGAGGTTAAATATAATCAGCTTCTCATTAATGGACAGTTTGTTGATGCAGCCTCAG : GGAAGACATTTCCTACATTTGACCCTCGAACAGGCGAAGCTATTACTACGGTTGCGGAGGCCGACACTGAAGATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAAGGACCATGGCCTAAAATGACTTGTGCA : GAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTG : GTTGGGCTGATAAAATTCATGGTCTTACAGCTCCTGCTGACAGTTTGCACCATGTTCAGACCCTGCATGAGCCAATTGGTGTTGCAGGACAGATAATACCCTGGAATTTTCCGTTATTAATGTTCGCCTGGAAAGTTGGCCCTGCACTTGCTTGTGGTAACACTGTCGTACTAAAACCAGCAGAACAAACACCACTCTCTGCCCTGTATGTGTCAAAGTTATTCCATGAG : GTTGGACTTCCCCCTGGAGTCTTAAATGTCATTCCTGGATCCGGTAGTGCAGGTGCAGATCTTGCCAGTCATATGGATGTCGAT</gDNA_template>
            <first_frame> E  Q  F  *  M  L  S  L  Y  V  N  I  M  L  C  M  K  *  R  S  S  K  I  S  V  S  N  F  E  N  F   : F  R  Y  S  N  Y  W  R  K  G  I  R  R  F  C  S  S  A  V  V  H  E  E  P  I  T  P  P  V  E  V  K  Y  N  Q  L  L  I  N  G  Q  F  V  D  A  A  S   : G  K  T  F  P  T  F  D  P  R  T  G  E  A  I  T  T  V  A  E  A  D  T  E  D  V  N  R  A  V  F  A  A  R  K  A  F  D  E  G  P  W  P  K  M  T  C  A  :  E  R  S  C  I  M  L  Q  F  A  D  L  L  E  R  H  S  D  E  L  A  A  L  E  T  W  D  K  G  K  P  Y  E  Q  A  A  N  E  E  I  P  M  L  I  R  L  F  R  Y  Y  A   : G  W  A  D  K  I  H  G  L  T  A  P  A  D  S  L  H  H  V  Q  T  L  H  E  P  I  G  V  A  G  Q  I  I  P  W  N  F  P  L  L  M  F  A  W  K  V  G  P  A  L  A  C  G  N  T  V  V  L  K  P  A  E  Q  T  P  L  S  A  L  Y  V  S  K  L  F  H  E  :  V  G  L  P  P  G  V  L  N  V  I  P  G  S  G  S  A  G  A  D  L  A  S  H  M  D  V  D </first_frame>
            <second_frame>  N  N  F  E  C  S  L  F  M  *  T  L  C  F  V  *  N  K  G  P  L  R  F  L  *  A  T  L  K  I  S  :  L  G  T  P  T  T  G  E  R  V  S  E  G  F  V  A  V  P  W  C  M  K  S  Q  S  L  H  L  L  R  L  N  I  I  S  F  S  L  M  D  S  L  L  M  Q  P  Q  :  G  R  H  F  L  H  L  T  L  E  Q  A  K  L  L  L  R  L  R  R  P  T  L  K  M  S  T  V  Q  S  L  L  P  V  K  H  L  M  K  D  H  G  L  K  *  L  V  Q :   K  G  H  V  *  C  C  S  L  L  I  C  L  R  G  T  V  M  N  L  Q  H  L  R  L  G  I  R  E  S  L  T  N  K  L  Q  M  K  K  Y  Q  C  S  F  V  F  S  D  T  M  L  :  V  G  L  I  K  F  M  V  L  Q  L  L  L  T  V  C  T  M  F  R  P  C  M  S  Q  L  V  L  Q  D  R  *  Y  P  G  I  F  R  Y  *  C  S  P  G  K  L  A  L  H  L  L  V  V  T  L  S  Y  *  N  Q  Q  N  K  H  H  S  L  P  C  M  C  Q  S  Y  S  M  R :   L  D  F  P  L  E  S  *  M  S  F  L  D  P  V  V  Q  V  Q  I  L  P  V  I  W  M  S   </second_frame>
            <third_frame>   T  I  L  N  A  L  S  L  C  K  H  Y  A  L  Y  E  I  K  V  L  *  D  F  C  K  Q  L  *  K  F  L :   *  V  L  Q  L  L  E  K  G  Y  Q  K  V  L  *  Q  C  R  G  A  *  R  A  N  H  S  T  C  *  G  *  I  *  S  A  S  H  *  W  T  V  C  *  C  S  L  R :   E  D  I  S  Y  I  *  P  S  N  R  R  S  Y  Y  Y  G  C  G  G  R  H  *  R  C  Q  P  C  S  L  C  C  P  *  S  I  *  *  R  T  M  A  *  N  D  L  C   : R  K  V  M  Y  N  V  A  V  C  *  F  A  *  E  A  Q  *  *  T  C  S  T  *  D  L  G  *  G  K  A  L  R  T  S  C  K  *  R  N  T  N  A  H  S  S  F  Q  I  L  C  W :   L  G  *  *  N  S  W  S  Y  S  S  C  *  Q  F  A  P  C  S  D  P  A  *  A  N  W  C  C  R  T  D  N  T  L  E  F  S  V  I  N  V  R  L  E  S  W  P  C  T  C  L  W  *  H  C  R  T  K  T  S  R  T  N  T  T  L  C  P  V  C  V  K  V  I  P  *   : G  W  T  S  P  W  S  L  K  C  H  S  W  I  R  *  C  R  C  R  S  C  Q  S  Y  G  C  R  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E02.1" strand="-"/>
                <serials PGL_serial="13" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="123091" stop="123052"/>
                    <exon start="121369" stop="121229"/>
                    <exon start="121149" stop="121007"/>
                    <exon start="120559" stop="120406"/>
                    <exon start="120265" stop="120036"/>
                    <exon start="119816" stop="119733"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>792</number_coding_nucleotides>
                  <number_encoded_amino_acids>264</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RSSKISVSNFENFFRYSNYWRKGIRRFCSSAVVHEEPITPPVEVKYNQLLINGQFVDAASGKTFPTFDPRTGEAITTVAEADTEDVNRAVFAARKAFDEGPWPKMTCAERSCIMLQFADLLERHSDELAALETWDKGKPYEQAANEEIPMLIRLFRYYAGWADKIHGLTAPADSLHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTVVLKPAEQTPLSALYVSKLFHEVGLPPGVLNVIPGSGSAGADLASHMDVD</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="123145" e_stop="123052"/>
            <exon e_start="121369" e_stop="121229"/>
            <exon e_start="121149" e_stop="120913"/>
            <exon e_start="120265" e_stop="120053"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.901" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.750" e_score="1.000"/>
          <exon-intron don_prob="0.177" acc_prob="0.997" e_score="0.996"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="123145" e_stop="123052" e_length="94"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.901">
            <gDNA_intron_boundary i_start="123051" i_stop="121370" i_length="1682"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="121369" e_stop="121229" e_length="141"/>
          </exon>
          <intron i_serial="2" don_prob="0.986" acc_prob="0.750">
            <gDNA_intron_boundary i_start="121228" i_stop="121150" i_length="79"/>
          </intron>
          <exon e_serial="3" e_score="0.996">
            <gDNA_exon_boundary e_start="121149" e_stop="120913" e_length="237"/>
          </exon>
          <intron i_serial="3" don_prob="0.177" acc_prob="0.997">
            <gDNA_intron_boundary i_start="120912" i_stop="120266" i_length="647"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="120265" e_stop="120053" e_length="213"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="123145" stop="123052"/>
              <exon start="121369" stop="121306"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U594106" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="123130" stop="123052"/>
              <exon start="121369" stop="121229"/>
              <exon start="121149" stop="120913"/>
              <exon start="120265" stop="120053"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U594105" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="4" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAACAATTTTGAATGCTCTCTCTTTATGTAAACATTATGCTTTGTATGAAATAAAGGTCCTCTAAGATTTCTGTAAGCAACTTTGAAAATTTCT : TTAGGTACTCCAACTACTGGAGAAAGGGTATCAGAAGGTTTTGTAGCAGTGCCGTGGTGCATGAAGAGCCAATCACTCCACCTGTTGAGGTTAAATATAATCAGCTTCTCATTAATGGACAGTTTGTTGATGCAGCCTCAG : GGAAGACATTTCCTACATTTGACCCTCGAACAGGCGAAGCTATTACTACGGTTGCGGAGGCCGACACTGAAGATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAAGGACCATGGCCTAAAATGACTTGTGCAGTAACCGAACTTTCTTATCTTTCCATATCCTCTTCCTTGTCCCAACAGTGAGAGGCGGATTTAGAATTTGAACTTAACATGTTCAACCTTTAAG : GTTGGGCTGATAAAATTCATGGTCTTACAGCTCCTGCTGACAGTTTGCACCATGTTCAGACCCTGCATGAGCCAATTGGTGTTGCAGGACAGATAATACCCTGGAATTTTCCGTTATTAATGTTCGCCTGGAAAGTTGGCCCTGCACTTGCTTGTGGTAACACTGTCGTACTAAAACCAGCAGAACAAACACCACTCTCTGCCCTGTATGTGT</gDNA_template>
            <first_frame> E  Q  F  *  M  L  S  L  Y  V  N  I  M  L  C  M  K  *  R  S  S  K  I  S  V  S  N  F  E  N  F   : F  R  Y  S  N  Y  W  R  K  G  I  R  R  F  C  S  S  A  V  V  H  E  E  P  I  T  P  P  V  E  V  K  Y  N  Q  L  L  I  N  G  Q  F  V  D  A  A  S   : G  K  T  F  P  T  F  D  P  R  T  G  E  A  I  T  T  V  A  E  A  D  T  E  D  V  N  R  A  V  F  A  A  R  K  A  F  D  E  G  P  W  P  K  M  T  C  A  V  T  E  L  S  Y  L  S  I  S  S  S  L  S  Q  Q  *  E  A  D  L  E  F  E  L  N  M  F  N  L  *   : G  W  A  D  K  I  H  G  L  T  A  P  A  D  S  L  H  H  V  Q  T  L  H  E  P  I  G  V  A  G  Q  I  I  P  W  N  F  P  L  L  M  F  A  W  K  V  G  P  A  L  A  C  G  N  T  V  V  L  K  P  A  E  Q  T  P  L  S  A  L  Y  V  </first_frame>
            <second_frame>  N  N  F  E  C  S  L  F  M  *  T  L  C  F  V  *  N  K  G  P  L  R  F  L  *  A  T  L  K  I  S  :  L  G  T  P  T  T  G  E  R  V  S  E  G  F  V  A  V  P  W  C  M  K  S  Q  S  L  H  L  L  R  L  N  I  I  S  F  S  L  M  D  S  L  L  M  Q  P  Q  :  G  R  H  F  L  H  L  T  L  E  Q  A  K  L  L  L  R  L  R  R  P  T  L  K  M  S  T  V  Q  S  L  L  P  V  K  H  L  M  K  D  H  G  L  K  *  L  V  Q  *  P  N  F  L  I  F  P  Y  P  L  P  C  P  N  S  E  R  R  I  *  N  L  N  L  T  C  S  T  F  K  :  V  G  L  I  K  F  M  V  L  Q  L  L  L  T  V  C  T  M  F  R  P  C  M  S  Q  L  V  L  Q  D  R  *  Y  P  G  I  F  R  Y  *  C  S  P  G  K  L  A  L  H  L  L  V  V  T  L  S  Y  *  N  Q  Q  N  K  H  H  S  L  P  C  M  C </second_frame>
            <third_frame>   T  I  L  N  A  L  S  L  C  K  H  Y  A  L  Y  E  I  K  V  L  *  D  F  C  K  Q  L  *  K  F  L :   *  V  L  Q  L  L  E  K  G  Y  Q  K  V  L  *  Q  C  R  G  A  *  R  A  N  H  S  T  C  *  G  *  I  *  S  A  S  H  *  W  T  V  C  *  C  S  L  R :   E  D  I  S  Y  I  *  P  S  N  R  R  S  Y  Y  Y  G  C  G  G  R  H  *  R  C  Q  P  C  S  L  C  C  P  *  S  I  *  *  R  T  M  A  *  N  D  L  C  S  N  R  T  F  L  S  F  H  I  L  F  L  V  P  T  V  R  G  G  F  R  I  *  T  *  H  V  Q  P  L  R :   L  G  *  *  N  S  W  S  Y  S  S  C  *  Q  F  A  P  C  S  D  P  A  *  A  N  W  C  C  R  T  D  N  T  L  E  F  S  V  I  N  V  R  L  E  S  W  P  C  T  C  L  W  *  H  C  R  T  K  T  S  R  T  N  T  T  L  C  P  V  C   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E02.1" strand="-"/>
                <serials PGL_serial="13" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="123091" stop="123052"/>
                    <exon start="121369" stop="121229"/>
                    <exon start="121149" stop="120956"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>372</number_coding_nucleotides>
                  <number_encoded_amino_acids>124</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RSSKISVSNFENFFRYSNYWRKGIRRFCSSAVVHEEPITPPVEVKYNQLLINGQFVDAASGKTFPTFDPRTGEAITTVAEADTEDVNRAVFAARKAFDEGPWPKMTCAVTELSYLSISSSLSQQ*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E02.1" strand="-"/>
                <serials PGL_serial="13" AGS_serial="4" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="123069" stop="123052"/>
                    <exon start="121369" stop="121229"/>
                    <exon start="121149" stop="121015"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>291</number_coding_nucleotides>
                  <number_encoded_amino_acids>97</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ATLKISLGTPTTGERVSEGFVAVPWCMKSQSLHLLRLNIISFSLMDSLLMQPQGRHFLHLTLEQAKLLLRLRRPTLKMSTVQSLLPVKHLMKDHGLK*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E02.1" strand="-"/>
                <serials PGL_serial="13" AGS_serial="4" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="120913" stop="120054"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>213</number_coding_nucleotides>
                  <number_encoded_amino_acids>71</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GWADKIHGLTAPADSLHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTVVLKPAEQTPLSALYV</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="5">
          <exon_coordinates>
            <exon e_start="123147" e_stop="123052"/>
            <exon e_start="121369" e_stop="121229"/>
            <exon e_start="121149" e_stop="120309"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.901" e_score="0.938"/>
          <exon-intron don_prob="0.986" acc_prob="0.750" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.938">
            <gDNA_exon_boundary e_start="123147" e_stop="123052" e_length="96"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.901">
            <gDNA_intron_boundary i_start="123051" i_stop="121370" i_length="1682"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="121369" e_stop="121229" e_length="141"/>
          </exon>
          <intron i_serial="2" don_prob="0.986" acc_prob="0.750">
            <gDNA_intron_boundary i_start="121228" i_stop="121150" i_length="79"/>
          </intron>
          <exon e_serial="3" e_score="0.998">
            <gDNA_exon_boundary e_start="121149" e_stop="120309" e_length="841"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="123147" stop="123052"/>
              <exon start="121369" stop="121229"/>
              <exon start="121149" stop="120309"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U584016" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="123145" stop="123052"/>
              <exon start="121369" stop="121306"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U594106" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="5" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAGAACAATTTTGAATGCTCTCTCTTTATGTAAACATTATGCTTTGTATGAAATAAAGGTCCTCTAAGATTTCTGTAAGCAACTTTGAAAATTTCT : TTAGGTACTCCAACTACTGGAGAAAGGGTATCAGAAGGTTTTGTAGCAGTGCCGTGGTGCATGAAGAGCCAATCACTCCACCTGTTGAGGTTAAATATAATCAGCTTCTCATTAATGGACAGTTTGTTGATGCAGCCTCAG : GGAAGACATTTCCTACATTTGACCCTCGAACAGGCGAAGCTATTACTACGGTTGCGGAGGCCGACACTGAAGATGTCAACCGTGCAGTCTTTGCTGCCCGTAAAGCATTTGATGAAGGACCATGGCCTAAAATGACTTGTGCAGTAACCGAACTTTCTTATCTTTCCATATCCTCTTCCTTGTCCCAACAGTGAGAGGCGGATTTAGAATTTGAACTTAACATGTTCAACCTTTAAGGTTCTTATCGCTGAACACATTGATCTATCGGACATACGTGTTTAGATTTTAATATTCTCTCATTTTAGTACTTTCACATATATATTTATTTCCTGTATTATATGGTCCCTCTACCGAAGTTAATTTCTCAGTTGGTCGTTCAACTAATAGTAATTATTTGAGTAATATAAGTCACTTTCTTTGTTGAAGAAAATTGGAATCAAGTTGAAAAATGACTTCTTGAGATAATAACTATTTAGCAAAGTGACCATATGAGAAATCAATCCGCCTCTGCAGACAACTACAGCTTGTTTAAACTCCCAGTCTTACTTAAGCATGTACAATAATGTACTTACTTAACCAAATATTTCCAGGAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGTTAAGAAAATAAGAAAAATGGCGTTATGTTTCCTTTTGACAGTTTAATAACCACTTATTGTATATCAATTGACGTTCTAATGTTTGCTGAATCACC</gDNA_template>
            <first_frame> Q  N  N  F  E  C  S  L  F  M  *  T  L  C  F  V  *  N  K  G  P  L  R  F  L  *  A  T  L  K  I  S  :  L  G  T  P  T  T  G  E  R  V  S  E  G  F  V  A  V  P  W  C  M  K  S  Q  S  L  H  L  L  R  L  N  I  I  S  F  S  L  M  D  S  L  L  M  Q  P  Q  :  G  R  H  F  L  H  L  T  L  E  Q  A  K  L  L  L  R  L  R  R  P  T  L  K  M  S  T  V  Q  S  L  L  P  V  K  H  L  M  K  D  H  G  L  K  *  L  V  Q  *  P  N  F  L  I  F  P  Y  P  L  P  C  P  N  S  E  R  R  I  *  N  L  N  L  T  C  S  T  F  K  V  L  I  A  E  H  I  D  L  S  D  I  R  V  *  I  L  I  F  S  H  F  S  T  F  T  Y  I  F  I  S  C  I  I  W  S  L  Y  R  S  *  F  L  S  W  S  F  N  *  *  *  L  F  E  *  Y  K  S  L  S  L  L  K  K  I  G  I  K  L  K  N  D  F  L  R  *  *  L  F  S  K  V  T  I  *  E  I  N  P  P  L  Q  T  T  T  A  C  L  N  S  Q  S  Y  L  S  M  Y  N  N  V  L  T  *  P  N  I  S  R  K  G  H  V  *  C  C  S  L  L  I  C  L  R  G  T  V  M  N  L  Q  H  L  R  L  G  I  R  E  S  L  T  N  K  L  Q  M  K  K  Y  Q  C  S  F  V  F  S  D  T  M  L  V  K  K  I  R  K  M  A  L  C  F  L  L  T  V  *  *  P  L  I  V  Y  Q  L  T  F  *  C  L  L  N  H  </first_frame>
            <second_frame>  R  T  I  L  N  A  L  S  L  C  K  H  Y  A  L  Y  E  I  K  V  L  *  D  F  C  K  Q  L  *  K  F  L :   *  V  L  Q  L  L  E  K  G  Y  Q  K  V  L  *  Q  C  R  G  A  *  R  A  N  H  S  T  C  *  G  *  I  *  S  A  S  H  *  W  T  V  C  *  C  S  L  R :   E  D  I  S  Y  I  *  P  S  N  R  R  S  Y  Y  Y  G  C  G  G  R  H  *  R  C  Q  P  C  S  L  C  C  P  *  S  I  *  *  R  T  M  A  *  N  D  L  C  S  N  R  T  F  L  S  F  H  I  L  F  L  V  P  T  V  R  G  G  F  R  I  *  T  *  H  V  Q  P  L  R  F  L  S  L  N  T  L  I  Y  R  T  Y  V  F  R  F  *  Y  S  L  I  L  V  L  S  H  I  Y  L  F  P  V  L  Y  G  P  S  T  E  V  N  F  S  V  G  R  S  T  N  S  N  Y  L  S  N  I  S  H  F  L  C  *  R  K  L  E  S  S  *  K  M  T  S  *  D  N  N  Y  L  A  K  *  P  Y  E  K  S  I  R  L  C  R  Q  L  Q  L  V  *  T  P  S  L  T  *  A  C  T  I  M  Y  L  L  N  Q  I  F  P  G  K  V  M  Y  N  V  A  V  C  *  F  A  *  E  A  Q  *  *  T  C  S  T  *  D  L  G  *  G  K  A  L  R  T  S  C  K  *  R  N  T  N  A  H  S  S  F  Q  I  L  C  W  L  R  K  *  E  K  W  R  Y  V  S  F  *  Q  F  N  N  H  L  L  Y  I  N  *  R  S  N  V  C  *  I  T </second_frame>
            <third_frame>   E  Q  F  *  M  L  S  L  Y  V  N  I  M  L  C  M  K  *  R  S  S  K  I  S  V  S  N  F  E  N  F   : F  R  Y  S  N  Y  W  R  K  G  I  R  R  F  C  S  S  A  V  V  H  E  E  P  I  T  P  P  V  E  V  K  Y  N  Q  L  L  I  N  G  Q  F  V  D  A  A  S   : G  K  T  F  P  T  F  D  P  R  T  G  E  A  I  T  T  V  A  E  A  D  T  E  D  V  N  R  A  V  F  A  A  R  K  A  F  D  E  G  P  W  P  K  M  T  C  A  V  T  E  L  S  Y  L  S  I  S  S  S  L  S  Q  Q  *  E  A  D  L  E  F  E  L  N  M  F  N  L  *  G  S  Y  R  *  T  H  *  S  I  G  H  T  C  L  D  F  N  I  L  S  F  *  Y  F  H  I  Y  I  Y  F  L  Y  Y  M  V  P  L  P  K  L  I  S  Q  L  V  V  Q  L  I  V  I  I  *  V  I  *  V  T  F  F  V  E  E  N  W  N  Q  V  E  K  *  L  L  E  I  I  T  I  *  Q  S  D  H  M  R  N  Q  S  A  S  A  D  N  Y  S  L  F  K  L  P  V  L  L  K  H  V  Q  *  C  T  Y  L  T  K  Y  F  Q  E  R  S  C  I  M  L  Q  F  A  D  L  L  E  R  H  S  D  E  L  A  A  L  E  T  W  D  K  G  K  P  Y  E  Q  A  A  N  E  E  I  P  M  L  I  R  L  F  R  Y  Y  A  G  *  E  N  K  K  N  G  V  M  F  P  F  D  S  L  I  T  T  Y  C  I  S  I  D  V  L  M  F  A  E  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E02.1" strand="-"/>
                <serials PGL_serial="13" AGS_serial="5" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="123091" stop="123052"/>
                    <exon start="121369" stop="121229"/>
                    <exon start="121149" stop="120956"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>372</number_coding_nucleotides>
                  <number_encoded_amino_acids>124</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RSSKISVSNFENFFRYSNYWRKGIRRFCSSAVVHEEPITPPVEVKYNQLLINGQFVDAASGKTFPTFDPRTGEAITTVAEADTEDVNRAVFAARKAFDEGPWPKMTCAVTELSYLSISSSLSQQ*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E02.1" strand="-"/>
                <serials PGL_serial="13" AGS_serial="5" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="123069" stop="123052"/>
                    <exon start="121369" stop="121229"/>
                    <exon start="121149" stop="121015"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>291</number_coding_nucleotides>
                  <number_encoded_amino_acids>97</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ATLKISLGTPTTGERVSEGFVAVPWCMKSQSLHLLRLNIISFSLMDSLLMQPQGRHFLHLTLEQAKLLLRLRRPTLKMSTVQSLLPVKHLMKDHGLK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="6">
          <exon_coordinates>
            <exon e_start="119641" e_stop="118913"/>
            <exon e_start="118833" e_stop="118696"/>
            <exon e_start="118415" e_stop="118355"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.933" acc_prob="0.857" e_score="0.999"/>
          <exon-intron don_prob="0.997" acc_prob="0.996" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="119641" e_stop="118913" e_length="729"/>
          </exon>
          <intron i_serial="1" don_prob="0.933" acc_prob="0.857">
            <gDNA_intron_boundary i_start="118912" i_stop="118834" i_length="79"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="118833" e_stop="118696" e_length="138"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.996">
            <gDNA_intron_boundary i_start="118695" i_stop="118416" i_length="280"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="118415" e_stop="118355" e_length="61"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="119641" stop="118913"/>
              <exon start="118833" stop="118696"/>
              <exon start="118415" stop="118355"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U584013" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="6" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCCAAGGCAGTTTCAGTATCAAATTTGAAATGTTGGATTGTATAAAGGAGTGTCAGAACACGGTATTTCAGTTTCAACATATCTCTAGGTAGCAATGAAGCTATCCGTCGCTAATTCTACCCCCTCTTCCATCCCAAAGAAGATTAAAAGAAGTAAATAGCCTAATTATAGTGTCTCATTAGATAGTATAATCCACATGTAGAAAATGAAGAAAATCATATCTTTTTCTTCCAGCTTCCCCATTAAAAGTCAATAAACAACATAAAGAGGTTATGCATCCTGATGTCCTTTCAGCTTTTGTATTTCATGCTTGCTTTTATTGATGCAGCTGTGATGTGTAAAGTTTTCTGAGTGAATACTCTGGAATAGATGAGGGAGACTGAAGGAGCACTGACATCTTCTACTACTTGTTTTCGTATAGATTTAAACAGCTTGGTCCTCGACATTACTTGCATCTTTTCCCCCTGTAAAATGTTTTTTTTTGGTGATTTTTTAATTTTTCTGTGATGTCTAAATTGCGATGTGTCTCTACATCACTCCTTTTGGTGTCTACAGATTGCTTTTACAGGGTCCACAGAAACTGGTAAAGCTGTCGTAGGTGCAGCTGCAAAGAGCAACCTAAAACCTGTGACATTGGAGCTCGGAGGAAAATCTCCTTTCATCATTTGTGAAGATGCAGACGTTGATAAAGCTGTTGAGTTGGCTCATTCTGCTGTTTTCTTTAACCAG : GGACAATGCTGCTGTGCTGGATCTCGGACATTCGTACATGAAAGAGTATATGATGAATTTGTGGAGAAAGCCAAAGCTCGTGCTTTAAAACGCATTGTTGGAGACCCTTTCAAGAAGGGAGTTGAACAAGGTCCGCAG : ATTGATACAGAGCAATTTGAGAAGATCCTGAAGTACATAAAATCTGGTACTGAAAGCGGGG</gDNA_template>
            <first_frame> S  K  A  V  S  V  S  N  L  K  C  W  I  V  *  R  S  V  R  T  R  Y  F  S  F  N  I  S  L  G  S  N  E  A  I  R  R  *  F  Y  P  L  F  H  P  K  E  D  *  K  K  *  I  A  *  L  *  C  L  I  R  *  Y  N  P  H  V  E  N  E  E  N  H  I  F  F  F  Q  L  P  H  *  K  S  I  N  N  I  K  R  L  C  I  L  M  S  F  Q  L  L  Y  F  M  L  A  F  I  D  A  A  V  M  C  K  V  F  *  V  N  T  L  E  *  M  R  E  T  E  G  A  L  T  S  S  T  T  C  F  R  I  D  L  N  S  L  V  L  D  I  T  C  I  F  S  P  C  K  M  F  F  F  G  D  F  L  I  F  L  *  C  L  N  C  D  V  S  L  H  H  S  F  W  C  L  Q  I  A  F  T  G  S  T  E  T  G  K  A  V  V  G  A  A  A  K  S  N  L  K  P  V  T  L  E  L  G  G  K  S  P  F  I  I  C  E  D  A  D  V  D  K  A  V  E  L  A  H  S  A  V  F  F  N  Q  :  G  Q  C  C  C  A  G  S  R  T  F  V  H  E  R  V  Y  D  E  F  V  E  K  A  K  A  R  A  L  K  R  I  V  G  D  P  F  K  K  G  V  E  Q  G  P  Q  :  I  D  T  E  Q  F  E  K  I  L  K  Y  I  K  S  G  T  E  S  G  </first_frame>
            <second_frame>  P  R  Q  F  Q  Y  Q  I  *  N  V  G  L  Y  K  G  V  S  E  H  G  I  S  V  S  T  Y  L  *  V  A  M  K  L  S  V  A  N  S  T  P  S  S  I  P  K  K  I  K  R  S  K  *  P  N  Y  S  V  S  L  D  S  I  I  H  M  *  K  M  K  K  I  I  S  F  S  S  S  F  P  I  K  S  Q  *  T  T  *  R  G  Y  A  S  *  C  P  F  S  F  C  I  S  C  L  L  L  L  M  Q  L  *  C  V  K  F  S  E  *  I  L  W  N  R  *  G  R  L  K  E  H  *  H  L  L  L  L  V  F  V  *  I  *  T  A  W  S  S  T  L  L  A  S  F  P  P  V  K  C  F  F  L  V  I  F  *  F  F  C  D  V  *  I  A  M  C  L  Y  I  T  P  F  G  V  Y  R  L  L  L  Q  G  P  Q  K  L  V  K  L  S  *  V  Q  L  Q  R  A  T  *  N  L  *  H  W  S  S  E  E  N  L  L  S  S  F  V  K  M  Q  T  L  I  K  L  L  S  W  L  I  L  L  F  S  L  T  R :   D  N  A  A  V  L  D  L  G  H  S  Y  M  K  E  Y  M  M  N  L  W  R  K  P  K  L  V  L  *  N  A  L  L  E  T  L  S  R  R  E  L  N  K  V  R  R :   L  I  Q  S  N  L  R  R  S  *  S  T  *  N  L  V  L  K  A  G </second_frame>
            <third_frame>   Q  G  S  F  S  I  K  F  E  M  L  D  C  I  K  E  C  Q  N  T  V  F  Q  F  Q  H  I  S  R  *  Q  *  S  Y  P  S  L  I  L  P  P  L  P  S  Q  R  R  L  K  E  V  N  S  L  I  I  V  S  H  *  I  V  *  S  T  C  R  K  *  R  K  S  Y  L  F  L  P  A  S  P  L  K  V  N  K  Q  H  K  E  V  M  H  P  D  V  L  S  A  F  V  F  H  A  C  F  Y  *  C  S  C  D  V  *  S  F  L  S  E  Y  S  G  I  D  E  G  D  *  R  S  T  D  I  F  Y  Y  L  F  S  Y  R  F  K  Q  L  G  P  R  H  Y  L  H  L  F  P  L  *  N  V  F  F  W  *  F  F  N  F  S  V  M  S  K  L  R  C  V  S  T  S  L  L  L  V  S  T  D  C  F  Y  R  V  H  R  N  W  *  S  C  R  R  C  S  C  K  E  Q  P  K  T  C  D  I  G  A  R  R  K  I  S  F  H  H  L  *  R  C  R  R  *  *  S  C  *  V  G  S  F  C  C  F  L  *  P   : G  T  M  L  L  C  W  I  S  D  I  R  T  *  K  S  I  *  *  I  C  G  E  S  Q  S  S  C  F  K  T  H  C  W  R  P  F  Q  E  G  S  *  T  R  S  A   : D  *  Y  R  A  I  *  E  D  P  E  V  H  K  I  W  Y  *  K  R   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E02.1" strand="-"/>
                <serials PGL_serial="13" AGS_serial="6" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="119134" stop="118913"/>
                    <exon start="118833" stop="118696"/>
                    <exon start="118415" stop="118356"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>420</number_coding_nucleotides>
                  <number_encoded_amino_acids>140</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CLNCDVSLHHSFWCLQIAFTGSTETGKAVVGAAAKSNLKPVTLELGGKSPFIICEDADVDKAVELAHSAVFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRIVGDPFKKGVEQGPQIDTEQFEKILKYIKSGTESG</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="7">
          <exon_coordinates>
            <exon e_start="120560" e_stop="120383"/>
            <exon e_start="120265" e_stop="120036"/>
            <exon e_start="119816" e_stop="119730"/>
            <exon e_start="119086" e_stop="118971"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.997" e_score="0.989"/>
          <exon-intron don_prob="0.959" acc_prob="0.980" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.991"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.989">
            <gDNA_exon_boundary e_start="120560" e_stop="120383" e_length="178"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.997">
            <gDNA_intron_boundary i_start="120382" i_stop="120266" i_length="117"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="120265" e_stop="120036" e_length="230"/>
          </exon>
          <intron i_serial="2" don_prob="0.959" acc_prob="0.980">
            <gDNA_intron_boundary i_start="120035" i_stop="119817" i_length="219"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="119816" e_stop="119730" e_length="87"/>
          </exon>
          <intron i_serial="3" don_prob="0.996" acc_prob="1.000">
            <gDNA_intron_boundary i_start="119729" i_stop="119087" i_length="643"/>
          </intron>
          <exon e_serial="4" e_score="0.991">
            <gDNA_exon_boundary e_start="119086" e_stop="118971" e_length="116"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="120560" stop="120383"/>
              <exon start="120265" stop="120036"/>
              <exon start="119816" stop="119730"/>
              <exon start="119086" stop="118971"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U584018" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="7" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGAAAGGTCATGTATAATGTTGCAGTTTGCTGATTTGCTTGAGAGGCACAGTGATGAACTTGCAGCACTTGAGACTTGGGATAAGGGAAAGCCTTACGAACAAGCTGCAAATGAAGAAATACCAATGCTCATTCGTCTTTTCAGATACTATGCTGGTTAAGAAAATAAGAAAAATGGC : GTTGGGCTGATAAAATTCATGGTCTTACAGCTCCTGCTGACAGTTTGCACCATGTTCAGACCCTGCATGAGCCAATTGGTGTTGCAGGACAGATAATACCCTGGAATTTTCCGTTATTAATGTTCGCCTGGAAAGTTGGCCCTGCACTTGCTTGTGGTAACACTGTCGTACTAAAACCAGCAGAACAAACACCACTCTCTGCCCTGTATGTGTCAAAGTTATTCCATGAG : GTTGGACTTCCCCCTGGAGTCTTAAATGTCATTCCTGGATCCGGTAGTGCAGGTGCAGATCTTGCCAGTCATATGGATGTCGATAAG : ATTGCTTTTACAGGGTCCACAGAAACTGGTAAAGCTGTCGTAGGTGCAGCTGCAAAGAGCAACCTAAAACCTGTGACATTGGAGCTCGGAGGAAAATCTCCTTTCATCATTTGTGA</gDNA_template>
            <first_frame> G  K  V  M  Y  N  V  A  V  C  *  F  A  *  E  A  Q  *  *  T  C  S  T  *  D  L  G  *  G  K  A  L  R  T  S  C  K  *  R  N  T  N  A  H  S  S  F  Q  I  L  C  W  L  R  K  *  E  K  W   : R  W  A  D  K  I  H  G  L  T  A  P  A  D  S  L  H  H  V  Q  T  L  H  E  P  I  G  V  A  G  Q  I  I  P  W  N  F  P  L  L  M  F  A  W  K  V  G  P  A  L  A  C  G  N  T  V  V  L  K  P  A  E  Q  T  P  L  S  A  L  Y  V  S  K  L  F  H  E  :  V  G  L  P  P  G  V  L  N  V  I  P  G  S  G  S  A  G  A  D  L  A  S  H  M  D  V  D  K  :  I  A  F  T  G  S  T  E  T  G  K  A  V  V  G  A  A  A  K  S  N  L  K  P  V  T  L  E  L  G  G  K  S  P  F  I  I  C   </first_frame>
            <second_frame>  E  R  S  C  I  M  L  Q  F  A  D  L  L  E  R  H  S  D  E  L  A  A  L  E  T  W  D  K  G  K  P  Y  E  Q  A  A  N  E  E  I  P  M  L  I  R  L  F  R  Y  Y  A  G  *  E  N  K  K  N  G  :  V  G  L  I  K  F  M  V  L  Q  L  L  L  T  V  C  T  M  F  R  P  C  M  S  Q  L  V  L  Q  D  R  *  Y  P  G  I  F  R  Y  *  C  S  P  G  K  L  A  L  H  L  L  V  V  T  L  S  Y  *  N  Q  Q  N  K  H  H  S  L  P  C  M  C  Q  S  Y  S  M  R :   L  D  F  P  L  E  S  *  M  S  F  L  D  P  V  V  Q  V  Q  I  L  P  V  I  W  M  S  I  R :   L  L  L  Q  G  P  Q  K  L  V  K  L  S  *  V  Q  L  Q  R  A  T  *  N  L  *  H  W  S  S  E  E  N  L  L  S  S  F  V  </second_frame>
            <third_frame>   K  G  H  V  *  C  C  S  L  L  I  C  L  R  G  T  V  M  N  L  Q  H  L  R  L  G  I  R  E  S  L  T  N  K  L  Q  M  K  K  Y  Q  C  S  F  V  F  S  D  T  M  L  V  K  K  I  R  K  M  A :   L  G  *  *  N  S  W  S  Y  S  S  C  *  Q  F  A  P  C  S  D  P  A  *  A  N  W  C  C  R  T  D  N  T  L  E  F  S  V  I  N  V  R  L  E  S  W  P  C  T  C  L  W  *  H  C  R  T  K  T  S  R  T  N  T  T  L  C  P  V  C  V  K  V  I  P  *   : G  W  T  S  P  W  S  L  K  C  H  S  W  I  R  *  C  R  C  R  S  C  Q  S  Y  G  C  R  *   : D  C  F  Y  R  V  H  R  N  W  *  S  C  R  R  C  S  C  K  E  Q  P  K  T  C  D  I  G  A  R  R  K  I  S  F  H  H  L  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E02.1" strand="-"/>
                <serials PGL_serial="13" AGS_serial="7" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="120392" stop="120383"/>
                    <exon start="120265" stop="120036"/>
                    <exon start="119816" stop="119730"/>
                    <exon start="119086" stop="118973"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>441</number_coding_nucleotides>
                  <number_encoded_amino_acids>147</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EKWRWADKIHGLTAPADSLHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTVVLKPAEQTPLSALYVSKLFHEVGLPPGVLNVIPGSGSAGADLASHMDVDKIAFTGSTETGKAVVGAAAKSNLKPVTLELGGKSPFIIC</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="+" PGL_start="126213" PGL_stop="128279"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="126213" e_stop="126792"/>
            <exon e_start="127249" e_stop="128279"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.967" acc_prob="0.985" e_score="0.969"/>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.969">
            <gDNA_exon_boundary e_start="126213" e_stop="126792" e_length="580"/>
          </exon>
          <intron i_serial="1" don_prob="0.967" acc_prob="0.985">
            <gDNA_intron_boundary i_start="126793" i_stop="127248" i_length="456"/>
          </intron>
          <exon e_serial="2" e_score="0.993">
            <gDNA_exon_boundary e_start="127249" e_stop="128279" e_length="1031"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126213" stop="126792"/>
              <exon start="127249" stop="127494"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U582910" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126534" stop="126792"/>
              <exon start="127249" stop="128279"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U582911" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGTGTCATCAGTGAACAAGAGAAGCTACAATCATATTCTTTCCTTACCTTCCCTTTTTATATTGTTATTCTAAATAGTTTATCAATAACTTCATAAAATTAATACATAAATTATATAAAAAAAATTCTATTATACTCATGATAGTTAATTACTTCGAAAATAGATATTTGATCAACTTAAGAAAATTAGTAATTAATTTTCATATTATAATTTTGAAAAGGAATCTCTAACAAACAAATTAAAAATAAAAGATGATTTACCTATCATTTTTTTGAAAAATTAACTTTAATGAAAGTGAAATCCAAACAGGTGAGAGATATAAAAAAAAAAAAAGGAAAAGAGAGAGTACTAAATTAAGATGCAGTCCATTCTTTTGCACATAAACAGTAGTAAAGACGTAGTATAAATACTTGAAGTGCGAAGCTGAGAAATGATCCGTCGTGTATGAGTATTCATTGCTGGAGACGAGAAAATTAAATAGAGATGGAGAAGAAGAGATAAGAATCGGAGCAACGTCAAGAATTCAGATACAGAGTAATTTTTGGACAGAGACAGATTTGCTGCTGCTAAAAATGCAGAG : AAAAATCAGGCTCATCTGGCTTAAACAGCTTGGGCATTTTTAAGCTAGAAGAAGAATCAGCCATCTTCTGTTCTATTCCTCTTCTCGTATTAGTAGCAAATCGTTTGGCCAAAATTGTAGCTCCAAGTTGTTGGGAACCACGAGAACCACTGGCTACTAACGGTTGCTCAGGACCAGCGTCATCAAAACTTTGCTCATTGTAGTTACCCTCATCATTAGGATCTTGATTATAATAATAGCTCTCTTGTAGAGCCAACTCGTATTCCATCTTTTTCTTCTTATACCTTCTCCATGCAGCCTGTATAAAACAAGCACCCCATGTTCTCCACTGATGAGAATAGTACCTAAATGCATGCTGTAGCTTCATGCTGTGAAGACGTTTAAATTGAACTGCAAAAAATTTCAGGTCTTCAGCTCGAAGTGCAAATGCTTCAACTTCAGTAAGTGTTCTCACTGTTCGAGTTGAAGCTGGCAACTGCGTTGAGTTAGGCAGTAAGGCCCAAGTCAGCAATTCTTCACCACAAAAATCATTAGGTCCAAGGGTGATTGAATTGAAGAATCCAGATCTTCCCCCATTTGTCGTGGAGCTCTCTAGTTGTCCCCTGATGATAAAGAGCATCTCACTCACTGGATCATCTTCTAGAACAACATATGTGCCCATTATGCTCAGGGTCGACACTAGGCGTTCACATATTGCATCAAGCAACTGGTCATCCATTTGCTCAAAAAATGGAACCTGCGCAGTCAGGAGATTTTGGGGTCTCTAAAGCTTAGCAAACAAAAGTGGATGGGTTTAGGCATTTACAGAGTAAAAATACAACTCCAAACATGTGGCTGATGCAAATACAAAACGTAAGGTACATCACAAGACAAGTCAAAGCTTAAATTGATGACTGAAGAGATGGAACTATTTTATTTATTCATTCACTAATACTTATTAGTACTTATTTCTTTTGCTCAAATCTTTAACTACTGGCAAATATTTCTGCCTGCAGCTCTTTTCCTTAATGTTTGCCTCCTGAAAGTATTTC</gDNA_template>
            <first_frame> S  V  I  S  E  Q  E  K  L  Q  S  Y  S  F  L  T  F  P  F  Y  I  V  I  L  N  S  L  S  I  T  S  *  N  *  Y  I  N  Y  I  K  K  I  L  L  Y  S  *  *  L  I  T  S  K  I  D  I  *  S  T  *  E  N  *  *  L  I  F  I  L  *  F  *  K  G  I  S  N  K  Q  I  K  N  K  R  *  F  T  Y  H  F  F  E  K  L  T  L  M  K  V  K  S  K  Q  V  R  D  I  K  K  K  K  G  K  E  R  V  L  N  *  D  A  V  H  S  F  A  H  K  Q  *  *  R  R  S  I  N  T  *  S  A  K  L  R  N  D  P  S  C  M  S  I  H  C  W  R  R  E  N  *  I  E  M  E  K  K  R  *  E  S  E  Q  R  Q  E  F  R  Y  R  V  I  F  G  Q  R  Q  I  C  C  C  *  K  C  R   : E  K  S  G  S  S  G  L  N  S  L  G  I  F  K  L  E  E  E  S  A  I  F  C  S  I  P  L  L  V  L  V  A  N  R  L  A  K  I  V  A  P  S  C  W  E  P  R  E  P  L  A  T  N  G  C  S  G  P  A  S  S  K  L  C  S  L  *  L  P  S  S  L  G  S  *  L  *  *  *  L  S  C  R  A  N  S  Y  S  I  F  F  F  L  Y  L  L  H  A  A  C  I  K  Q  A  P  H  V  L  H  *  *  E  *  Y  L  N  A  C  C  S  F  M  L  *  R  R  L  N  *  T  A  K  N  F  R  S  S  A  R  S  A  N  A  S  T  S  V  S  V  L  T  V  R  V  E  A  G  N  C  V  E  L  G  S  K  A  Q  V  S  N  S  S  P  Q  K  S  L  G  P  R  V  I  E  L  K  N  P  D  L  P  P  F  V  V  E  L  S  S  C  P  L  M  I  K  S  I  S  L  T  G  S  S  S  R  T  T  Y  V  P  I  M  L  R  V  D  T  R  R  S  H  I  A  S  S  N  W  S  S  I  C  S  K  N  G  T  C  A  V  R  R  F  W  G  L  *  S  L  A  N  K  S  G  W  V  *  A  F  T  E  *  K  Y  N  S  K  H  V  A  D  A  N  T  K  R  K  V  H  H  K  T  S  Q  S  L  N  *  *  L  K  R  W  N  Y  F  I  Y  S  F  T  N  T  Y  *  Y  L  F  L  L  L  K  S  L  T  T  G  K  Y  F  C  L  Q  L  F  S  L  M  F  A  S  *  K  Y  F </first_frame>
            <second_frame>  V  S  S  V  N  K  R  S  Y  N  H  I  L  S  L  P  S  L  F  I  L  L  F  *  I  V  Y  Q  *  L  H  K  I  N  T  *  I  I  *  K  K  F  Y  Y  T  H  D  S  *  L  L  R  K  *  I  F  D  Q  L  K  K  I  S  N  *  F  S  Y  Y  N  F  E  K  E  S  L  T  N  K  L  K  I  K  D  D  L  P  I  I  F  L  K  N  *  L  *  *  K  *  N  P  N  R  *  E  I  *  K  K  K  K  E  K  R  E  Y  *  I  K  M  Q  S  I  L  L  H  I  N  S  S  K  D  V  V  *  I  L  E  V  R  S  *  E  M  I  R  R  V  *  V  F  I  A  G  D  E  K  I  K  *  R  W  R  R  R  D  K  N  R  S  N  V  K  N  S  D  T  E  *  F  L  D  R  D  R  F  A  A  A  K  N  A  E  :  K  N  Q  A  H  L  A  *  T  A  W  A  F  L  S  *  K  K  N  Q  P  S  S  V  L  F  L  F  S  Y  *  *  Q  I  V  W  P  K  L  *  L  Q  V  V  G  N  H  E  N  H  W  L  L  T  V  A  Q  D  Q  R  H  Q  N  F  A  H  C  S  Y  P  H  H  *  D  L  D  Y  N  N  S  S  L  V  E  P  T  R  I  P  S  F  S  S  Y  T  F  S  M  Q  P  V  *  N  K  H  P  M  F  S  T  D  E  N  S  T  *  M  H  A  V  A  S  C  C  E  D  V  *  I  E  L  Q  K  I  S  G  L  Q  L  E  V  Q  M  L  Q  L  Q  *  V  F  S  L  F  E  L  K  L  A  T  A  L  S  *  A  V  R  P  K  S  A  I  L  H  H  K  N  H  *  V  Q  G  *  L  N  *  R  I  Q  I  F  P  H  L  S  W  S  S  L  V  V  P  *  *  *  R  A  S  H  S  L  D  H  L  L  E  Q  H  M  C  P  L  C  S  G  S  T  L  G  V  H  I  L  H  Q  A  T  G  H  P  F  A  Q  K  M  E  P  A  Q  S  G  D  F  G  V  S  K  A  *  Q  T  K  V  D  G  F  R  H  L  Q  S  K  N  T  T  P  N  M  W  L  M  Q  I  Q  N  V  R  Y  I  T  R  Q  V  K  A  *  I  D  D  *  R  D  G  T  I  L  F  I  H  S  L  I  L  I  S  T  Y  F  F  C  S  N  L  *  L  L  A  N  I  S  A  C  S  S  F  P  *  C  L  P  P  E  S  I   </second_frame>
            <third_frame>   C  H  Q  *  T  R  E  A  T  I  I  F  F  P  Y  L  P  F  L  Y  C  Y  S  K  *  F  I  N  N  F  I  K  L  I  H  K  L  Y  K  K  N  S  I  I  L  M  I  V  N  Y  F  E  N  R  Y  L  I  N  L  R  K  L  V  I  N  F  H  I  I  I  L  K  R  N  L  *  Q  T  N  *  K  *  K  M  I  Y  L  S  F  F  *  K  I  N  F  N  E  S  E  I  Q  T  G  E  R  Y  K  K  K  K  R  K  R  E  S  T  K  L  R  C  S  P  F  F  C  T  *  T  V  V  K  T  *  Y  K  Y  L  K  C  E  A  E  K  *  S  V  V  Y  E  Y  S  L  L  E  T  R  K  L  N  R  D  G  E  E  E  I  R  I  G  A  T  S  R  I  Q  I  Q  S  N  F  W  T  E  T  D  L  L  L  L  K  M  Q  R :   K  I  R  L  I  W  L  K  Q  L  G  H  F  *  A  R  R  R  I  S  H  L  L  F  Y  S  S  S  R  I  S  S  K  S  F  G  Q  N  C  S  S  K  L  L  G  T  T  R  T  T  G  Y  *  R  L  L  R  T  S  V  I  K  T  L  L  I  V  V  T  L  I  I  R  I  L  I  I  I  I  A  L  L  *  S  Q  L  V  F  H  L  F  L  L  I  P  S  P  C  S  L  Y  K  T  S  T  P  C  S  P  L  M  R  I  V  P  K  C  M  L  *  L  H  A  V  K  T  F  K  L  N  C  K  K  F  Q  V  F  S  S  K  C  K  C  F  N  F  S  K  C  S  H  C  S  S  *  S  W  Q  L  R  *  V  R  Q  *  G  P  S  Q  Q  F  F  T  T  K  I  I  R  S  K  G  D  *  I  E  E  S  R  S  S  P  I  C  R  G  A  L  *  L  S  P  D  D  K  E  H  L  T  H  W  I  I  F  *  N  N  I  C  A  H  Y  A  Q  G  R  H  *  A  F  T  Y  C  I  K  Q  L  V  I  H  L  L  K  K  W  N  L  R  S  Q  E  I  L  G  S  L  K  L  S  K  Q  K  W  M  G  L  G  I  Y  R  V  K  I  Q  L  Q  T  C  G  *  C  K  Y  K  T  *  G  T  S  Q  D  K  S  K  L  K  L  M  T  E  E  M  E  L  F  Y  L  F  I  H  *  Y  L  L  V  L  I  S  F  A  Q  I  F  N  Y  W  Q  I  F  L  P  A  A  L  F  L  N  V  C  L  L  K  V  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E02.1" strand="+"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="127638" stop="128015"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>375</number_coding_nucleotides>
                  <number_encoded_amino_acids>125</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TAKNFRSSARSANASTSVSVLTVRVEAGNCVELGSKAQVSNSSPQKSLGPRVIELKNPDLPPFVVELSSCPLMIKSISLTGSSSRTTYVPIMLRVDTRRSHIASSNWSSICSKNGTCAVRRFWGL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E02.1" strand="+"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="126783" stop="126792"/>
                    <exon start="127249" stop="127451"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KCREKSGSSGLNSLGIFKLEEESAIFCSIPLLVLVANRLAKIVAPSCWEPREPLATNGCSGPASSKLCSL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="-" PGL_start="131776" PGL_stop="130940"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="131776" e_stop="131153"/>
            <exon e_start="131080" e_stop="130940"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.996" e_score="1.000"/>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="131776" e_stop="131153" e_length="624"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.996">
            <gDNA_intron_boundary i_start="131152" i_stop="131081" i_length="72"/>
          </intron>
          <exon e_serial="2" e_score="0.993">
            <gDNA_exon_boundary e_start="131080" e_stop="130940" e_length="141"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="131776" stop="131153"/>
              <exon start="131080" stop="130940"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U566785" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGATGAAAAAAGGAGCTTCAATGGAACACTCTTAATTCATTCTTCCTTCTTTTCTAGCGCTAATTTTCACTCACTGTTTCATTCATAATACAAAAAAATTATTGGAATCTGTTGTGTTTTCCAGAAGAGAGACAATCTTCCGGAATCCGATTTTGATATCGGACTCCGCCATGGAAGATGACTAGAATATTTGCAAAGCCGGCGTCTCACCTCCGTCATTTACAGCAATCTTTGAAGAACAAATCATTTTCGAACGATGTGCCATGGTGGCGCCAAATTCTCGATCCAAACAGCGATATCGTCAATCGCTGGAACTATGTCTTCCTCCTTACCTGTCTCATCTCTCTTTTCATCGATCCACTCTACTTCTACGTACCTTTCGTCAGCGATAGAGCTTGTATGTCCACTGATGACGAAGCCGCCCGTGAAATTACCATCTATCGTTCTCTCACCGACATCTTTTACTTCCTTCACATTGCCATGAAGTTCCGCACAGCTTTTGTTGCTCCTAGCTCTAGGGTTTTCGGCCGGGGTGAGCTTGTTATGGATCCCCGTGAAATTGCTATACGATATCTCAAAACTGATTTCATCGTTGATTTTACAGCTGCTCTTCCCCTGCCTCAA : ATTGTTATTCGCTATGTAATCCCAGCAGCCAAAAGAAATGGTTCGGGTCATTCCAAAAGTACACTTGCACTTATCGTTCTCATACAATATGTGCCAAGGTTATTCGTTATTTTCCCATTAAATCAGCAGATTATCAAAACT</gDNA_template>
            <first_frame> *  *  K  K  E  L  Q  W  N  T  L  N  S  F  F  L  L  F  *  R  *  F  S  L  T  V  S  F  I  I  Q  K  N  Y  W  N  L  L  C  F  P  E  E  R  Q  S  S  G  I  R  F  *  Y  R  T  P  P  W  K  M  T  R  I  F  A  K  P  A  S  H  L  R  H  L  Q  Q  S  L  K  N  K  S  F  S  N  D  V  P  W  W  R  Q  I  L  D  P  N  S  D  I  V  N  R  W  N  Y  V  F  L  L  T  C  L  I  S  L  F  I  D  P  L  Y  F  Y  V  P  F  V  S  D  R  A  C  M  S  T  D  D  E  A  A  R  E  I  T  I  Y  R  S  L  T  D  I  F  Y  F  L  H  I  A  M  K  F  R  T  A  F  V  A  P  S  S  R  V  F  G  R  G  E  L  V  M  D  P  R  E  I  A  I  R  Y  L  K  T  D  F  I  V  D  F  T  A  A  L  P  L  P  Q  :  I  V  I  R  Y  V  I  P  A  A  K  R  N  G  S  G  H  S  K  S  T  L  A  L  I  V  L  I  Q  Y  V  P  R  L  F  V  I  F  P  L  N  Q  Q  I  I  K  T </first_frame>
            <second_frame>  D  E  K  R  S  F  N  G  T  L  L  I  H  S  S  F  F  S  S  A  N  F  H  S  L  F  H  S  *  Y  K  K  I  I  G  I  C  C  V  F  Q  K  R  D  N  L  P  E  S  D  F  D  I  G  L  R  H  G  R  *  L  E  Y  L  Q  S  R  R  L  T  S  V  I  Y  S  N  L  *  R  T  N  H  F  R  T  M  C  H  G  G  A  K  F  S  I  Q  T  A  I  S  S  I  A  G  T  M  S  S  S  L  P  V  S  S  L  F  S  S  I  H  S  T  S  T  Y  L  S  S  A  I  E  L  V  C  P  L  M  T  K  P  P  V  K  L  P  S  I  V  L  S  P  T  S  F  T  S  F  T  L  P  *  S  S  A  Q  L  L  L  L  L  A  L  G  F  S  A  G  V  S  L  L  W  I  P  V  K  L  L  Y  D  I  S  K  L  I  S  S  L  I  L  Q  L  L  F  P  C  L  K :   L  L  F  A  M  *  S  Q  Q  P  K  E  M  V  R  V  I  P  K  V  H  L  H  L  S  F  S  Y  N  M  C  Q  G  Y  S  L  F  S  H  *  I  S  R  L  S  K   </second_frame>
            <third_frame>   M  K  K  G  A  S  M  E  H  S  *  F  I  L  P  S  F  L  A  L  I  F  T  H  C  F  I  H  N  T  K  K  L  L  E  S  V  V  F  S  R  R  E  T  I  F  R  N  P  I  L  I  S  D  S  A  M  E  D  D  *  N  I  C  K  A  G  V  S  P  P  S  F  T  A  I  F  E  E  Q  I  I  F  E  R  C  A  M  V  A  P  N  S  R  S  K  Q  R  Y  R  Q  S  L  E  L  C  L  P  P  Y  L  S  H  L  S  F  H  R  S  T  L  L  L  R  T  F  R  Q  R  *  S  L  Y  V  H  *  *  R  S  R  P  *  N  Y  H  L  S  F  S  H  R  H  L  L  L  P  S  H  C  H  E  V  P  H  S  F  C  C  S  *  L  *  G  F  R  P  G  *  A  C  Y  G  S  P  *  N  C  Y  T  I  S  Q  N  *  F  H  R  *  F  Y  S  C  S  S  P  A  S   : N  C  Y  S  L  C  N  P  S  S  Q  K  K  W  F  G  S  F  Q  K  Y  T  C  T  Y  R  S  H  T  I  C  A  K  V  I  R  Y  F  P  I  K  S  A  D  Y  Q  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0236E02.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="131620" stop="131153"/>
                    <exon start="131080" stop="130940"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>609</number_coding_nucleotides>
                  <number_encoded_amino_acids>203</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YRTPPWKMTRIFAKPASHLRHLQQSLKNKSFSNDVPWWRQILDPNSDIVNRWNYVFLLTCLISLFIDPLYFYVPFVSDRACMSTDDEAAREITIYRSLTDIFYFLHIAMKFRTAFVAPSSRVFGRGELVMDPREIAIRYLKTDFIVDFTAALPLPQIVIRYVIPAAKRNGSGHSKSTLALIVLIQYVPRLFVIFPLNQQIIKT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 53 chains have been computed
$ 
$ memory statistics:
$ 82144 bytes spliced alignments in total
$ 36 spliced alignments have been stored
$ 2281 bytes was the average size of a spliced alignment
$ 27000 bytes predicted gene locations in total
$ 15 predicted gene locations have been stored
$ 1800 bytes was the average size of a predicted gene location
$ 2 megabytes was the average size of the backtrace matrix
$ 59 backtrace matrices have been allocated
$ 
$ date finished: 2009-12-01 10:29:44
-->
