<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-07-28 13:34:25"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02HBa0212P19-27mM8/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E546564" ref_strand="+" ref_description="SGN-E546564 [TUS-69-P22]">
      <seq>gtccgatgaggctgtgtgcaggtcctaattcggattcaaggttcatgtaatagaatgtcgcaacagagagcctctcttcatttgagtttacaattgctctgtgctcaatactcctatacacaccattgctcaatatctgccaagtcaaatgtatcacatttacgcgcataatattttcagcagtagtagaacatttttacctccatcatgtctccaatattcacaatcaaagcatttgggaggggctttatgggcacccaaatatcatcttttcggacttggagaccttcagtttcgttcagctggaaaaggatggtgaggacaccaggatcagaatgagtgcttaagccaattaccctgtttggttcagggcaaggcggataataattcatcctcattgactgcataccatcactgaatagatctctcgtttcctcttcgtccatccttaaagcctttgacaattgacatacaataatcattgctaggctcttaattcctttgcagtatgcttccaagacgtccctacatttcaaaacatattaattaaaagatgaggagagcaggacatagttataaggagataggcacctgagattcgagggcaatttctgaaacaagtcaactttgcggatataaggaggaagagtcattatgccaaacatatcactccaatcaagcttctgctcctccgatacaacgaatgcattcccaaaaccttcaaagctgtcttcctgttgcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0212P19.2" temp_strand="+" temp_description="C02HBa0212P19.2  AC215423.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0212P19 sequenced_by:kribb upload_account_name:korea">
        <position start="991" stop="2341"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1291" g_stop="2041" g_length="751"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="742" r_length="742" r_score="0.961"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0212P19.2" gen_strand="+" ref_id="SGN-E546564" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>751</cumulative_length_of_scored_exons>
        <coverage percentage="1.012" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0212P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E546564" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1291" e_stop="2041"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCCGATGAGGCTGTGTGCAGGTCCTAATTCGGATTCAAGGTTCATGTAATAGAATGTCGCAACAGAGAGCCTTTCTTCATTTGAGTTTACAATTGCTCTGTGCTCAATACTCCTATACACACCATTGCTCAATATCTGCCAAGTTAAATATATCACATTTACGCGCATAATATTTTCAGGCGGTAGTAGAACATTTTTACCTCCATCATGTCTCCAATATTCACAATCAAAGCATTTGGGAGGGGCTTTATGGGCACCCAAATATCATCTTTTCGGACTTGTAGACCTTCAGTTTCGTTCAGCTGGAAAAGGATGGTGAGGACACCAGGATCAGAATGAGTGCTTAAGCCAATTGCCCTGTTTGGTTCAGGGCAAGGCGGATAATAATTCATCCTCATTGACTGCATACCATCACTGAATAGATCTCTCATTTCCTCTTCGTCCATCCTTAAAGCCTTTGTCAATTGGCATACGATGATCCTTGCTAGGCTCTTAATTTCTTTGCAGTAAGCTTCCAAGACGTCCCTACATTTCAATACACACAAACATATTAATTAAAAGATGAGGAGAGCGGGATATAGTTATAAGGAGATAGGCACCTGAGATTCGAGGGCAATTTCTGAAACAAGTCCACTTTGCGGATACGAGGAGGAAGAGTCATTATGCCAAACATATCACTCCAATCAAGCTTCTGCTCCTCCGATACAACGAATGCATTCCCAAAACCTTCCAAGCTGTCTTCCTGTTGCC</genome_strand>
        <mrna_strand>GTCCGATGAGGCTGTGTGCAGGTCCTAATTCGGATTCAAGGTTCATGTAATAGAATGTCGCAACAGAGAGCCTCTCTTCATTTGAGTTTACAATTGCTCTGTGCTCAATACTCCTATACACACCATTGCTCAATATCTGCCAAGTCAAATGTATCACATTTACGCGCATAATATTTTCA-GCAGTAGTAGAACATTTTTACCTCCATCATGTCTCCAATATTCACAATCAAAGCATTTGGGAGGGGCTTTATGGGCACCCAAATATCATCTTTTCGGACTTGGAGACCTTCAGTTTCGTTCAGCTGGAAAAGGATGGTGAGGACACCAGGATCAGAATGAGTGCTTAAGCCAATTACCCTGTTTGGTTCAGGGCAAGGCGGATAATAATTCATCCTCATTGACTGCATACCATCACTGAATAGATCTCTCGTTTCCTCTTCGTCCATCCTTAAAGCCTTTGACAATTGACATACAATAATCATTGCTAGGCTCTTAATTCCTTTGCAGTATGCTTCCAAGACGTCCCTACA-TT---T---CA-AAACATATTAATTAAAAGATGAGGAGAGCAGGACATAGTTATAAGGAGATAGGCACCTGAGATTCGAGGGCAATTTCTGAAACAAGTCAACTTTGCGGATATAAGGAGGAAGAGTCATTATGCCAAACATATCACTCCAATCAAGCTTCTGCTCCTCCGATACAACGAATGCATTCCCAAAACCTTCAAAGCTGTCTTCCTGTTGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E359331" ref_strand="+" ref_description="SGN-E359331 [cLHT-31-J17]">
      <seq>gctgtgtgcacgtcctaattgggattcaaggttcatgtaatagaatgtcgcaacagagagcctctcttcatttgagtttacaattgctctgtgctcaatactcctatacacaccattgctcaatatctgccaagtcaaatgtatcacatttacgcgcataatattttcagcagtagtagaacatttttacctccatcatgtctccaatattcacaatcaaagcatttgggaggggctttatgggcacccaaatatcatcttttcggacttggagaccttcagtttcgttcagctggaaaaggatggtgaggacaccaggatcagaatgagtgcttaagccaattaccctgtttggttcaaggcaaggcggataataattcatcctcattgactgcataccatcactgaatagatctctcgtttcctcttcgtccatccttaaagcctttgacaattgacatacaataatcattgctaggctcttaattcctttgcagtatgcttccaagacgtccctacatttcaaaacatattaattaaaagatgaggagagcaggacatagttataaggagataagcacctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0212P19.2" temp_strand="+" temp_description="C02HBa0212P19.2  AC215423.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0212P19 sequenced_by:kribb upload_account_name:korea">
        <position start="1001" stop="2193"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1301" g_stop="1893" g_length="593"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="584" r_length="584" r_score="0.951"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0212P19.2" gen_strand="+" ref_id="SGN-E359331" ref_strand="+">
        <total_alignment_score>0.951</total_alignment_score>
        <cumulative_length_of_scored_exons>593</cumulative_length_of_scored_exons>
        <coverage percentage="1.015" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0212P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E359331" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1301" e_stop="1893"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTGTGTGCAGGTCCTAATTCGGATTCAAGGTTCATGTAATAGAATGTCGCAACAGAGAGCCTTTCTTCATTTGAGTTTACAATTGCTCTGTGCTCAATACTCCTATACACACCATTGCTCAATATCTGCCAAGTTAAATATATCACATTTACGCGCATAATATTTTCAGGCGGTAGTAGAACATTTTTACCTCCATCATGTCTCCAATATTCACAATCAAAGCATTTGGGAGGGGCTTTATGGGCACCCAAATATCATCTTTTCGGACTTGTAGACCTTCAGTTTCGTTCAGCTGGAAAAGGATGGTGAGGACACCAGGATCAGAATGAGTGCTTAAGCCAATTGCCCTGTTTGGTTCAGGGCAAGGCGGATAATAATTCATCCTCATTGACTGCATACCATCACTGAATAGATCTCTCATTTCCTCTTCGTCCATCCTTAAAGCCTTTGTCAATTGGCATACGATGATCCTTGCTAGGCTCTTAATTTCTTTGCAGTAAGCTTCCAAGACGTCCCTACATTTCAATACACACAAACATATTAATTAAAAGATGAGGAGAGCGGGATATAGTTATAAGGAGATAGGCACCTG</genome_strand>
        <mrna_strand>GCTGTGTGCACGTCCTAATTGGGATTCAAGGTTCATGTAATAGAATGTCGCAACAGAGAGCCTCTCTTCATTTGAGTTTACAATTGCTCTGTGCTCAATACTCCTATACACACCATTGCTCAATATCTGCCAAGTCAAATGTATCACATTTACGCGCATAATATTTTCA-GCAGTAGTAGAACATTTTTACCTCCATCATGTCTCCAATATTCACAATCAAAGCATTTGGGAGGGGCTTTATGGGCACCCAAATATCATCTTTTCGGACTTGGAGACCTTCAGTTTCGTTCAGCTGGAAAAGGATGGTGAGGACACCAGGATCAGAATGAGTGCTTAAGCCAATTACCCTGTTTGGTTCAAGGCAAGGCGGATAATAATTCATCCTCATTGACTGCATACCATCACTGAATAGATCTCTCGTTTCCTCTTCGTCCATCCTTAAAGCCTTTGACAATTGACATACAATAATCATTGCTAGGCTCTTAATTCCTTTGCAGTATGCTTCCAAGACGTCCCTACA-TT---T---CA-AAACATATTAATTAAAAGATGAGGAGAGCAGGACATAGTTATAAGGAGATAAGCACCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E234270" ref_strand="+" ref_description="SGN-E234270 [cLEL-8-E14](-)">
      <seq>ctagtctcctcactcctcaatgccctgcagaatttagaaggattggagtggctgattacttcaaaggatatttctctcgagagctcgttggaaaatcatatgtcgattctataagaattggaaatggaggcgatggaagcaattgataaatgtttgcattttatgcccccttggataccaacagattgtttgatttggatggacttttaactgtatcattttgtggatgtataatgtttgaataaattgtggcatttgttgtggttgcataaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0212P19.2" temp_strand="-" temp_description="C02HBa0212P19.2  AC215423.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0212P19 sequenced_by:kribb upload_account_name:korea">
        <position start="9490" stop="5082"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9190" g_stop="8918" g_length="273"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="273" r_length="273" r_score="0.985"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="8917" i_stop="8201" i_length="717">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.731" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="8200" g_stop="8187" g_length="14"/>
          <reference_exon_boundary r_type="cDNA" r_start="274" r_stop="287" r_length="14" r_score="0.643"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0212P19.2" gen_strand="-" ref_id="SGN-E234270" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>287</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0212P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E234270" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9190" e_stop="8918"/>
          <exon e_start="8200" e_stop="8187"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAGTCTCCTCACTCCTCAATGCCCTGCAGAATTTAGGAGGATTGGAGTGGCTGATTACTTCAAAGGATATTTCTCTCGAGAGCTCGTTGGAAAATCATATGTCGATTCTATAAGAATTGGAAATGGAGGCGATGGAAGCAATTGATAAATGTTTGCATTTTATGCCCCCTTGGATACCAACAGATTGTTTGATTTGGATGGACTTTTTACTGTATCATTTTGTGGATGTATAATGTTTGAATAAATTGTGGCATTTGTTGTGGTTGAATAACATCATTATTGTTTGATTTTAATGTATCAAATCGTATATTAGCTACCTAAAACTGGTTGAATGGAACGACGTATCCATGTTTATACCCTGTGCTACTTGGAGAAGATGCTCAACATCTACTTCAGGGAAATGTTGTAAAAGCTTCAAGTTGCCTACAAAATCACCCCTTATTAGTTTGCTTTTAACACACATCAGCATAGCACAACAGATCCTCAATAGTATCTCCTGTAAATGAGCCATGGAGTTGGATGAAGAGCGTCTTATATATTAGATCAACCACAATATCCATCCATATAAACACACATTGATCGGATAAGTACCTGAAGGCCAAAAGGATTGCTGAGAAGCGTATCCCAGATCCGTAAGATGTGATGCAAACTAAACTCCTGAGTAAGGAGCAGAGTGATCCACCTAAATGCATAGAATTGCGGGTTAACCTGAAATCAAAACATTAGCTAGGACGACTGATATATATGTGAGCAATAACTTAGGTATTTATAGCTGTGCCTAAGAAATAGGTTCACATTCACCTTTGTTTTTAATTCAAGATGGTGCCACAATTCTTCATCATTAGTTTTCAATAACTCTGACAATTTGGAAAGAGTTGAGTGGATACCAAACGAACTGCAATCAAATTGTTGACAGAAGTGATCCACACAGCTACTCATTAGTATAACAAAACAGGAAAAAGTATCTGCTTCTATATTTGCCTGCACAGTGGAGAAAAACAAA</genome_strand>
        <mrna_strand>CTAGTCTCCTCACTCCTCAATGCCCTGCAGAATTTAGAAGGATTGGAGTGGCTGATTACTTCAAAGGATATTTCTCTCGAGAGCTCGTTGGAAAATCATATGTCGATTCTATAAGAATTGGAAATGGAGGCGATGGAAGCAATTGATAAATGTTTGCATTTTATGCCCCCTTGGATACCAACAGATTGTTTGATTTGGATGGACTTTTAACTGTATCATTTTGTGGATGTATAATGTTTGAATAAATTGTGGCATTTGTTGTGGTTGCATAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E234020" ref_strand="+" ref_description="SGN-E234020 [cLEL-8-E14](-)">
      <seq>gattgtgacaaatggaatctacaaaagcactgaacatcgagcaattgtgaacgaagataaagagaggatttccattgctacatttttgagccccaatctggatggagatttaggtccagctcctagtctcctcactcctcaatgccctgcagaatttaggaggattggagtggctgattacttcaaaggatatttctctcgagagctcgatgaaaaatcatatgtcgattctataagaattggaaatcgcgccaatgttagctaatgatacacgagtgcattttatgcccccgtggataccaacagattgtttgatttggatggactttttactgtatcattttgtggatgtataatgtttgaataaactgtggcatttgttgtggttgaataaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0212P19.2" temp_strand="-" temp_description="C02HBa0212P19.2  AC215423.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0212P19 sequenced_by:kribb upload_account_name:korea">
        <position start="9612" stop="8617"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9312" g_stop="8918" g_length="395"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="395" r_length="395" r_score="0.954"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="396" polyA_stop="409"/>
      <MATCH_line gen_id="C02HBa0212P19.2" gen_strand="-" ref_id="SGN-E234020" ref_strand="+">
        <total_alignment_score>0.954</total_alignment_score>
        <cumulative_length_of_scored_exons>395</cumulative_length_of_scored_exons>
        <coverage percentage="0.966" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0212P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E234020" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9312" e_stop="8918"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATTCTGACAAATGGAATCTACAAAAGCACTGAACATCGAGCAATTGTGAACGAAGATAAAGAGAGGATTTCCATTGCTACATTTTTGAGCCCCAATCTGGATGGAGATTTAGGTCCAGCTCCTAGTCTCCTCACTCCTCAATGCCCTGCAGAATTTAGGAGGATTGGAGTGGCTGATTACTTCAAAGGATATTTCTCTCGAGAGCTCGTTGGAAAATCATATGTCGATTCTATAAGAATTGGAAATGGAGGCGATGGAAGCAATTGATAAATGTTTGCATTTTATGCCCCCTTGGATACCAACAGATTGTTTGATTTGGATGGACTTTTTACTGTATCATTTTGTGGATGTATAATGTTTGAATAAATTGTGGCATTTGTTGTGGTTGAATAAC</genome_strand>
        <mrna_strand>GATTGTGACAAATGGAATCTACAAAAGCACTGAACATCGAGCAATTGTGAACGAAGATAAAGAGAGGATTTCCATTGCTACATTTTTGAGCCCCAATCTGGATGGAGATTTAGGTCCAGCTCCTAGTCTCCTCACTCCTCAATGCCCTGCAGAATTTAGGAGGATTGGAGTGGCTGATTACTTCAAAGGATATTTCTCTCGAGAGCTCGATGAAAAATCATATGTCGATTCTATAAGAATTGGAAATCGCGCCAATGTTAGCTAATGATACACGAGTGCATTTTATGCCCCCGTGGATACCAACAGATTGTTTGATTTGGATGGACTTTTTACTGTATCATTTTGTGGATGTATAATGTTTGAATAAACTGTGGCATTTGTTGTGGTTGAATAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E220248" ref_strand="+" ref_description="SGN-E220248 [cLEL-12-C4](-)">
      <seq>aaaggatatttctctcgagagctcgttggaaaatcatatgtcgattctataagaattggaaatggaggcgatggaagcaattgataaatgtttgcattttatgcccccttggataccaacagattgtttgatttggatgaactttttactgtatcattttgtgaatgtataatgtttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0212P19.2" temp_strand="-" temp_description="C02HBa0212P19.2  AC215423.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0212P19 sequenced_by:kribb upload_account_name:korea">
        <position start="9428" stop="8651"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9128" g_stop="8951" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="178" r_length="178" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0212P19.2" gen_strand="-" ref_id="SGN-E220248" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>178</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0212P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E220248" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9128" e_stop="8951"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGGATATTTCTCTCGAGAGCTCGTTGGAAAATCATATGTCGATTCTATAAGAATTGGAAATGGAGGCGATGGAAGCAATTGATAAATGTTTGCATTTTATGCCCCCTTGGATACCAACAGATTGTTTGATTTGGATGGACTTTTTACTGTATCATTTTGTGGATGTATAATGTTTG</genome_strand>
        <mrna_strand>AAAGGATATTTCTCTCGAGAGCTCGTTGGAAAATCATATGTCGATTCTATAAGAATTGGAAATGGAGGCGATGGAAGCAATTGATAAATGTTTGCATTTTATGCCCCCTTGGATACCAACAGATTGTTTGATTTGGATGAACTTTTTACTGTATCATTTTGTGAATGTATAATGTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E333231" ref_strand="+" ref_description="SGN-E333231 [cTOD-20-F5]">
      <seq>tgaaatcggaaatcagagcatttttcgatctaccaatggaagagaagacgaaattcgagcaagaagaaggagatctcgaaggatacgggcaagcatttgttgtatctgaagagcaaaagttagattgggctgatatactttacatgatcactctccctactcatttgcgaaaacctcacttgtttccaaagcttcctgcctcgttcagggatgcattggaacaatactcaagagcactgaaggaacttgctatgaaaattctgtacgtaatggcaagagctttagggatgaaaacagaggatatgaatgtactatttgaacaagacgggacacaaatgatgagaataaattattatcctccttgtcctcaaccagagcgcgtaatggggttatgccctcatactgatgctattggtctagctatattacttcaggttaatgaaacggaaggtcttncaattaagaaagatggagcttggattccggttccatatcttcctgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0212P19.2" temp_strand="-" temp_description="C02HBa0212P19.2  AC215423.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0212P19 sequenced_by:kribb upload_account_name:korea">
        <position start="10334" stop="9160"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10034" g_stop="9827" g_length="208"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="208" r_length="208" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="9826" i_stop="9756" i_length="71">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.784" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="9755" g_stop="9460" g_length="296"/>
          <reference_exon_boundary r_type="cDNA" r_start="209" r_stop="504" r_length="296" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0212P19.2" gen_strand="-" ref_id="SGN-E333231" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>504</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0212P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E333231" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10034" e_stop="9827"/>
          <exon e_start="9755" e_stop="9460"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAATCGGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGACGAAATTCGAGCAAGAAGAAGGAGATCTCGAAGGATACGGGCAAGCATTTGTTGTATCTGAAGAACAAAAGTTAGATTGGGCTGATATACTTTACATGATCACTCTCCCTACTCATTTGCGAAAACCTCACTTGTTTCCAAAGCTTCCTGCCTCGTTCAGGTACGATAATATATAACTGAGTTTACGATTAAATATTTAGTTCACAATATTTAAATTCTTGGACCGATAAGGGATGCATTGGAACAATACTCAAGAACACTGAAGGAACTTGCTATGAAAATTCTGTACGTAATGGCCAGAGCTTTAGGGATGAAAACAGAGGATATGAATGTACTATTTGAACAAGACGGGACACAAATGATGAGAATAAATTATTATCCTCCTTGTCCTCAACCAGAGCGCGTAATGGGGTTATGCCCCCATACTGATGCTATTGGTCTAGCTATATTACTTCAGGTTAATGAAACGGAAGGTCTTCAAATTAAGAAAGATGGAGCTTGGACTCCGGTTCCATATCTTCCTGATG</genome_strand>
        <mrna_strand>TGAAATCGGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGACGAAATTCGAGCAAGAAGAAGGAGATCTCGAAGGATACGGGCAAGCATTTGTTGTATCTGAAGAGCAAAAGTTAGATTGGGCTGATATACTTTACATGATCACTCTCCCTACTCATTTGCGAAAACCTCACTTGTTTCCAAAGCTTCCTGCCTCGTTCAG.......................................................................GGATGCATTGGAACAATACTCAAGAGCACTGAAGGAACTTGCTATGAAAATTCTGTACGTAATGGCAAGAGCTTTAGGGATGAAAACAGAGGATATGAATGTACTATTTGAACAAGACGGGACACAAATGATGAGAATAAATTATTATCCTCCTTGTCCTCAACCAGAGCGCGTAATGGGGTTATGCCCTCATACTGATGCTATTGGTCTAGCTATATTACTTCAGGTTAATGAAACGGAAGGTCTTNCAATTAAGAAAGATGGAGCTTGGATTCCGGTTCCATATCTTCCTGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E331048" ref_strand="+" ref_description="SGN-E331048 [cTOD-6-O7]">
      <seq>agatattgatgatgattcggaactcgtgaggcttcatctcgcttgcaaagaatggggattttttcagctggtgaatcatggagtgaattcctcattgatgaagaaagtgaaatcggaaatcagagcatttttcgatctaccaatggaagagaagacgaaattcgagcaagaagaaggagatctcgaaggatacgggcaagcatttgttgtatctgaagagcaaaagttagattgggctgatatactttacatgatcactctccctactcatttgcgaaaacctcacttgtttccaaagcttcctgcctcgttcagggatgcattggaacaatactcaagagcactgaaggaacttgctatgaaaattctgtacgtaatggcaagagctttagggatgaaaacagaggatatgaatgtactatttgaacaagacgggacacaaatgatgagaataaattattatcctccttgtcctcaaccagagcgcgtaatggggttatgccctcatactgatgctattggtctagctatattac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0212P19.2" temp_strand="-" temp_description="C02HBa0212P19.2  AC215423.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0212P19 sequenced_by:kribb upload_account_name:korea">
        <position start="10734" stop="9235"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10434" g_stop="10368" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="67" r_length="67" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10367" i_stop="10075" i_length="293">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="10074" g_stop="9827" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="68" r_stop="315" r_length="248" r_score="0.996"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="9826" i_stop="9756" i_length="71">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.784" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="9755" g_stop="9535" g_length="221"/>
          <reference_exon_boundary r_type="cDNA" r_start="316" r_stop="536" r_length="221" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0212P19.2" gen_strand="-" ref_id="SGN-E331048" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>536</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0212P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E331048" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10434" e_stop="10368"/>
          <exon e_start="10074" e_stop="9827"/>
          <exon e_start="9755" e_stop="9535"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGATATTGATGATGATTCGGAACTCGTGAGGCTTCATCTCGCTTGCAAAGAATGGGGATTTTTTCAGGTTTATATATCAAAAAAACACTTTTTTTAAAAAAATTATTGTTTTATGTTACAGAAATGTTGGAGTTGACTTATTTAACCATCAATAATACAACTGCACTCCAAAACATACAATAATCTTATTAAATATAACAAGTGATATTCTTTTTTTTGACGTATTGAAACTAACCTAGGAAGAAACAAAATTTAACAATCTTTTTGATTACCGATCATATCTTTTAATTTAAAAATAAACTGATGTATCTTCGTGTCGCATGATGATATCGATTTTTTTAAAAAAAAATACATGTGCAGCTGGTGAATCATGGAGTGAATTCCTCATTGATGAAGAAAGTGAAATCGGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGACGAAATTCGAGCAAGAAGAAGGAGATCTCGAAGGATACGGGCAAGCATTTGTTGTATCTGAAGAACAAAAGTTAGATTGGGCTGATATACTTTACATGATCACTCTCCCTACTCATTTGCGAAAACCTCACTTGTTTCCAAAGCTTCCTGCCTCGTTCAGGTACGATAATATATAACTGAGTTTACGATTAAATATTTAGTTCACAATATTTAAATTCTTGGACCGATAAGGGATGCATTGGAACAATACTCAAGAACACTGAAGGAACTTGCTATGAAAATTCTGTACGTAATGGCCAGAGCTTTAGGGATGAAAACAGAGGATATGAATGTACTATTTGAACAAGACGGGACACAAATGATGAGAATAAATTATTATCCTCCTTGTCCTCAACCAGAGCGCGTAATGGGGTTATGCCCCCATACTGATGCTATTGGTCTAGCTATATTAC</genome_strand>
        <mrna_strand>AGATATTGATGATGATTCGGAACTCGTGAGGCTTCATCTCGCTTGCAAAGAATGGGGATTTTTTCAG.....................................................................................................................................................................................................................................................................................................CTGGTGAATCATGGAGTGAATTCCTCATTGATGAAGAAAGTGAAATCGGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGACGAAATTCGAGCAAGAAGAAGGAGATCTCGAAGGATACGGGCAAGCATTTGTTGTATCTGAAGAGCAAAAGTTAGATTGGGCTGATATACTTTACATGATCACTCTCCCTACTCATTTGCGAAAACCTCACTTGTTTCCAAAGCTTCCTGCCTCGTTCAG.......................................................................GGATGCATTGGAACAATACTCAAGAGCACTGAAGGAACTTGCTATGAAAATTCTGTACGTAATGGCAAGAGCTTTAGGGATGAAAACAGAGGATATGAATGTACTATTTGAACAAGACGGGACACAAATGATGAGAATAAATTATTATCCTCCTTGTCCTCAACCAGAGCGCGTAATGGGGTTATGCCCTCATACTGATGCTATTGGTCTAGCTATATTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E355747" ref_strand="+" ref_description="SGN-E355747 [cLHT-18-N3]">
      <seq>ttaaattgcgcagttggtgaatcacggagtgagttcatcattgatggagaaagtgaagtcagaaatcacagcatttttcgatctaccaatggaagagaagacgaaattcgagcaagaggaaggagatatcgaaggatacggacaagcatttgttgtatctgaagaacaaaagttagactggggtgacatgctttacatgatcactcttcctactcatttgcgaaaacctcacttgtttccgaagcttgctgcctcactcaggtacgataatatataactgagtttacgattaaatatttagtgtacaatattaaaattcttggtccgtcaagggatgcattggaacaatactcaacagcactgaaggaacttgctatgaaaattctgtacgtaatggcaagagctttacggatgagaacagaggatatgaatgtattatttgaacaagacgggacacaaatgatgagaataaattattat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0212P19.2" temp_strand="-" temp_description="C02HBa0212P19.2  AC215423.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0212P19 sequenced_by:kribb upload_account_name:korea">
        <position start="10385" stop="9308"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10074" g_stop="9608" g_length="467"/>
          <reference_exon_boundary r_type="cDNA" r_start="14" r_stop="480" r_length="467" r_score="0.931"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0212P19.2" gen_strand="-" ref_id="SGN-E355747" ref_strand="+">
        <total_alignment_score>0.931</total_alignment_score>
        <cumulative_length_of_scored_exons>467</cumulative_length_of_scored_exons>
        <coverage percentage="0.973" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0212P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E355747" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10074" e_stop="9608"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGGTGAATCATGGAGTGAATTCCTCATTGATGAAGAAAGTGAAATCGGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGACGAAATTCGAGCAAGAAGAAGGAGATCTCGAAGGATACGGGCAAGCATTTGTTGTATCTGAAGAACAAAAGTTAGATTGGGCTGATATACTTTACATGATCACTCTCCCTACTCATTTGCGAAAACCTCACTTGTTTCCAAAGCTTCCTGCCTCGTTCAGGTACGATAATATATAACTGAGTTTACGATTAAATATTTAGTTCACAATATTTAAATTCTTGGACCGATAAGGGATGCATTGGAACAATACTCAAGAACACTGAAGGAACTTGCTATGAAAATTCTGTACGTAATGGCCAGAGCTTTAGGGATGAAAACAGAGGATATGAATGTACTATTTGAACAAGACGGGACACAAATGATGAGAATAAATTATTAT</genome_strand>
        <mrna_strand>TTGGTGAATCACGGAGTGAGTTCATCATTGATGGAGAAAGTGAAGTCAGAAATCACAGCATTTTTCGATCTACCAATGGAAGAGAAGACGAAATTCGAGCAAGAGGAAGGAGATATCGAAGGATACGGACAAGCATTTGTTGTATCTGAAGAACAAAAGTTAGACTGGGGTGACATGCTTTACATGATCACTCTTCCTACTCATTTGCGAAAACCTCACTTGTTTCCGAAGCTTGCTGCCTCACTCAGGTACGATAATATATAACTGAGTTTACGATTAAATATTTAGTGTACAATATTAAAATTCTTGGTCCGTCAAGGGATGCATTGGAACAATACTCAACAGCACTGAAGGAACTTGCTATGAAAATTCTGTACGTAATGGCAAGAGCTTTACGGATGAGAACAGAGGATATGAATGTATTATTTGAACAAGACGGGACACAAATGATGAGAATAAATTATTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E355750" ref_strand="+" ref_description="SGN-E355750 [cLHT-18-P5]">
      <seq>ttaaattgcgcagttggtgaatcacggagtgagttcatcattgatggagaaagtgaagtcagaaatcagagcatttttcgatctaccaatggaagagaagacgaaattcgagcaagaggaaggagatatcgaaggatacggacaagcatttgttgtatctgaagaacaaaagttagactggggtgacatgctttacatgatcactcttcctactcatttgcgaaaacctcacttgtttccgaagcttgctgcctcactcaggtacgataatatataactgagtttacgattaaatatttagtgtacaatattaaaattcttggtccgtcaagggatgcattggaacaatactcaacagcactgaaggaacttgctatgaaaattctgtacgtaatggcaagagctttacggatgagaacagaggatatgaatgtattatttgaacaagacgggacacaaatgatgagaataaattatta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0212P19.2" temp_strand="-" temp_description="C02HBa0212P19.2  AC215423.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0212P19 sequenced_by:kribb upload_account_name:korea">
        <position start="10385" stop="9309"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10074" g_stop="9609" g_length="466"/>
          <reference_exon_boundary r_type="cDNA" r_start="14" r_stop="479" r_length="466" r_score="0.933"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0212P19.2" gen_strand="-" ref_id="SGN-E355750" ref_strand="+">
        <total_alignment_score>0.933</total_alignment_score>
        <cumulative_length_of_scored_exons>466</cumulative_length_of_scored_exons>
        <coverage percentage="0.973" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0212P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E355750" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10074" e_stop="9609"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGGTGAATCATGGAGTGAATTCCTCATTGATGAAGAAAGTGAAATCGGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGACGAAATTCGAGCAAGAAGAAGGAGATCTCGAAGGATACGGGCAAGCATTTGTTGTATCTGAAGAACAAAAGTTAGATTGGGCTGATATACTTTACATGATCACTCTCCCTACTCATTTGCGAAAACCTCACTTGTTTCCAAAGCTTCCTGCCTCGTTCAGGTACGATAATATATAACTGAGTTTACGATTAAATATTTAGTTCACAATATTTAAATTCTTGGACCGATAAGGGATGCATTGGAACAATACTCAAGAACACTGAAGGAACTTGCTATGAAAATTCTGTACGTAATGGCCAGAGCTTTAGGGATGAAAACAGAGGATATGAATGTACTATTTGAACAAGACGGGACACAAATGATGAGAATAAATTATTA</genome_strand>
        <mrna_strand>TTGGTGAATCACGGAGTGAGTTCATCATTGATGGAGAAAGTGAAGTCAGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGACGAAATTCGAGCAAGAGGAAGGAGATATCGAAGGATACGGACAAGCATTTGTTGTATCTGAAGAACAAAAGTTAGACTGGGGTGACATGCTTTACATGATCACTCTTCCTACTCATTTGCGAAAACCTCACTTGTTTCCGAAGCTTGCTGCCTCACTCAGGTACGATAATATATAACTGAGTTTACGATTAAATATTTAGTGTACAATATTAAAATTCTTGGTCCGTCAAGGGATGCATTGGAACAATACTCAACAGCACTGAAGGAACTTGCTATGAAAATTCTGTACGTAATGGCAAGAGCTTTACGGATGAGAACAGAGGATATGAATGTATTATTTGAACAAGACGGGACACAAATGATGAGAATAAATTATTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E334512" ref_strand="+" ref_description="SGN-E334512 [cTOD-23-L15]">
      <seq>gttattatttcatatctcaataagtttactttgtaaaacaagtttgaggaaaaaaaaaataatacaaacttcatcaatggaagaagcaaagttgagaaagctaggtggttctctgaaagtccctaacgttcaagaacttgcaaagcaacaactagcagccgttccatcgcgatatatgcgcgataatattgaaaatcaatcatattcttccatattacctcaagttccagttattgatatgaaaaaattgctggaaattggagatattgatgatgattcggaactcgtgaggcttcatctcgcttgcaaagaatggggattttttcagctggtgaatcatggagtgaattcctcattgatgaagaaagtgaaatcggaaatcagagcatttttcgatctaccaatggaagagaagacgaaattcgagcaagaagaaggagatctcgaaggatacgggcaagcatttgttgtatctgaagagcaaaagttagattgggctgatatactttacatgatcactctccctactcatttgcgaaaacctcacttgtttccaaagcttcctgcctcgttcagggatgcattggaacaatactcaagagcactgaaggaacttgctatngaaattctgtacgtaatggcaagagctttagggatgaaacagangatatgaatgtactatttgaaacagacgggacacaaatgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0212P19.2" temp_strand="-" temp_description="C02HBa0212P19.2  AC215423.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0212P19 sequenced_by:kribb upload_account_name:korea">
        <position start="10993" stop="9323"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10693" g_stop="10368" g_length="326"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="328" r_length="328" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10367" i_stop="10075" i_length="293">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="10074" g_stop="9827" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="329" r_stop="576" r_length="248" r_score="0.996"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="9826" i_stop="9756" i_length="71">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.784" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="9755" g_stop="9623" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="577" r_stop="708" r_length="132" r_score="0.940"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0212P19.2" gen_strand="-" ref_id="SGN-E334512" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>707</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0212P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E334512" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10693" e_stop="10368"/>
          <exon e_start="10074" e_stop="9827"/>
          <exon e_start="9755" e_stop="9623"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTATTATTTCATATCTCAATAAGTTTACTTTGTAAAACAAGTTTGAGG-GAGAAAAAA-AATACAAACTTCATCAATGGAAGAAGCAAAGTTGAGAAAGCTAGGTGGTTCTCTGAAAGTCCCTAACGTTCAAGAACTTGCAAAGCAACAACTAGCAGCCGTTCCATCGCGATATATGCGCGATGATATTGAAAATCAATCATATTCTTCCATATTACCTCAAGTTCCAGTTATTGATATGAAAAAATTGCTGGAAATTGGAGATATTGATGATGATTCGGAACTCGTGAGGCTTCATCTCGCTTGCAAAGAATGGGGATTTTTTCAGGTTTATATATCAAAAAAACACTTTTTTTAAAAAAATTATTGTTTTATGTTACAGAAATGTTGGAGTTGACTTATTTAACCATCAATAATACAACTGCACTCCAAAACATACAATAATCTTATTAAATATAACAAGTGATATTCTTTTTTTTGACGTATTGAAACTAACCTAGGAAGAAACAAAATTTAACAATCTTTTTGATTACCGATCATATCTTTTAATTTAAAAATAAACTGATGTATCTTCGTGTCGCATGATGATATCGATTTTTTTAAAAAAAAATACATGTGCAGCTGGTGAATCATGGAGTGAATTCCTCATTGATGAAGAAAGTGAAATCGGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGACGAAATTCGAGCAAGAAGAAGGAGATCTCGAAGGATACGGGCAAGCATTTGTTGTATCTGAAGAACAAAAGTTAGATTGGGCTGATATACTTTACATGATCACTCTCCCTACTCATTTGCGAAAACCTCACTTGTTTCCAAAGCTTCCTGCCTCGTTCAGGTACGATAATATATAACTGAGTTTACGATTAAATATTTAGTTCACAATATTTAAATTCTTGGACCGATAAGGGATGCATTGGAACAATACTCAAGAACACTGAAGGAACTTGCTATGAAAATTCTGTACGTAATGGCCAGAGCTTTAGGGATGAAAACAGAGGATATGAATGTACTATTTGAACAAGACGGGACACAAATGATG</genome_strand>
        <mrna_strand>GTTATTATTTCATATCTCAATAAGTTTACTTTGTAAAACAAGTTTGAGGAAAAAAAAAATAATACAAACTTCATCAATGGAAGAAGCAAAGTTGAGAAAGCTAGGTGGTTCTCTGAAAGTCCCTAACGTTCAAGAACTTGCAAAGCAACAACTAGCAGCCGTTCCATCGCGATATATGCGCGATAATATTGAAAATCAATCATATTCTTCCATATTACCTCAAGTTCCAGTTATTGATATGAAAAAATTGCTGGAAATTGGAGATATTGATGATGATTCGGAACTCGTGAGGCTTCATCTCGCTTGCAAAGAATGGGGATTTTTTCAG.....................................................................................................................................................................................................................................................................................................CTGGTGAATCATGGAGTGAATTCCTCATTGATGAAGAAAGTGAAATCGGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGACGAAATTCGAGCAAGAAGAAGGAGATCTCGAAGGATACGGGCAAGCATTTGTTGTATCTGAAGAGCAAAAGTTAGATTGGGCTGATATACTTTACATGATCACTCTCCCTACTCATTTGCGAAAACCTCACTTGTTTCCAAAGCTTCCTGCCTCGTTCAG.......................................................................GGATGCATTGGAACAATACTCAAGAGCACTGAAGGAACTTGCTATNGAAATTCTGTACGTAATGGCAAGAGCTTTAGGGATG-AAACAGANGATATGAATGTACTATTTGAAACAGACGGGACACAAATGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E329296" ref_strand="+" ref_description="SGN-E329296 [cTOD-2-C2]">
      <seq>caaagttgagaaagctaggtggttctctgaaagtcccggacgttcaagaacttgcaaagcaacaactagcagccgttccatcgcgatatatgcgcgataatattgaaaatcaatcatattcttccatattacctcaagttccagttattgatatgaaaaaattgctggaaattggagatattgatgatgattcggaactcgtgaggcttcatctcgcttgcaaagaatggggattttttcagctggtgaatcatggagtgaattcctcattgatgaagaaagtgaaatcggaaatcagagcatttttcgatctaccaatggaagagaagacgaaattcgagcaagaagaaggagatctcgaaggatacgggcaagcatttgttgtatctgaagagcaaaagttagattgggctgatatactttacatgatcactctccctactcatttgcgaaaacctcacttgtttccaaagcttcctgcctcgttcaaggatgcattggaacaatactcaagagcactgaaggaacttgctatgaaaattctgtacgtaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0212P19.2" temp_strand="-" temp_description="C02HBa0212P19.2  AC215423.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0212P19 sequenced_by:kribb upload_account_name:korea">
        <position start="10909" stop="9392"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10609" g_stop="10368" g_length="242"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="242" r_length="242" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10367" i_stop="10075" i_length="293">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="10074" g_stop="9827" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="243" r_stop="490" r_length="248" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="9826" i_stop="9756" i_length="71">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.784" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="9755" g_stop="9692" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="491" r_stop="554" r_length="64" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0212P19.2" gen_strand="-" ref_id="SGN-E329296" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>554</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0212P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E329296" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10609" e_stop="10368"/>
          <exon e_start="10074" e_stop="9827"/>
          <exon e_start="9755" e_stop="9692"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAGTTGAGAAAGCTAGGTGGTTCTCTGAAAGTCCCTAACGTTCAAGAACTTGCAAAGCAACAACTAGCAGCCGTTCCATCGCGATATATGCGCGATGATATTGAAAATCAATCATATTCTTCCATATTACCTCAAGTTCCAGTTATTGATATGAAAAAATTGCTGGAAATTGGAGATATTGATGATGATTCGGAACTCGTGAGGCTTCATCTCGCTTGCAAAGAATGGGGATTTTTTCAGGTTTATATATCAAAAAAACACTTTTTTTAAAAAAATTATTGTTTTATGTTACAGAAATGTTGGAGTTGACTTATTTAACCATCAATAATACAACTGCACTCCAAAACATACAATAATCTTATTAAATATAACAAGTGATATTCTTTTTTTTGACGTATTGAAACTAACCTAGGAAGAAACAAAATTTAACAATCTTTTTGATTACCGATCATATCTTTTAATTTAAAAATAAACTGATGTATCTTCGTGTCGCATGATGATATCGATTTTTTTAAAAAAAAATACATGTGCAGCTGGTGAATCATGGAGTGAATTCCTCATTGATGAAGAAAGTGAAATCGGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGACGAAATTCGAGCAAGAAGAAGGAGATCTCGAAGGATACGGGCAAGCATTTGTTGTATCTGAAGAACAAAAGTTAGATTGGGCTGATATACTTTACATGATCACTCTCCCTACTCATTTGCGAAAACCTCACTTGTTTCCAAAGCTTCCTGCCTCGTTCAGGTACGATAATATATAACTGAGTTTACGATTAAATATTTAGTTCACAATATTTAAATTCTTGGACCGATAAGGGATGCATTGGAACAATACTCAAGAACACTGAAGGAACTTGCTATGAAAATTCTGTACGTAATG</genome_strand>
        <mrna_strand>CAAAGTTGAGAAAGCTAGGTGGTTCTCTGAAAGTCCCGGACGTTCAAGAACTTGCAAAGCAACAACTAGCAGCCGTTCCATCGCGATATATGCGCGATAATATTGAAAATCAATCATATTCTTCCATATTACCTCAAGTTCCAGTTATTGATATGAAAAAATTGCTGGAAATTGGAGATATTGATGATGATTCGGAACTCGTGAGGCTTCATCTCGCTTGCAAAGAATGGGGATTTTTTCAG.....................................................................................................................................................................................................................................................................................................CTGGTGAATCATGGAGTGAATTCCTCATTGATGAAGAAAGTGAAATCGGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGACGAAATTCGAGCAAGAAGAAGGAGATCTCGAAGGATACGGGCAAGCATTTGTTGTATCTGAAGAGCAAAAGTTAGATTGGGCTGATATACTTTACATGATCACTCTCCCTACTCATTTGCGAAAACCTCACTTGTTTCCAAAGCTTCCTGCCTCGTTCAA.......................................................................GGATGCATTGGAACAATACTCAAGAGCACTGAAGGAACTTGCTATGAAAATTCTGTACGTAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E329895" ref_strand="+" ref_description="SGN-E329895 [cTOD-5-A21]">
      <seq>atacacgttattatttcatatctcaataagtttactttgtaaaacaagtttgaggaaaaaaaaaataatacaaacttcatcaatggaagaagcaaagttgagaaagctaggtggttctctgaaagtccctaacgttcaagaacttgcaaagcaacaactagcagccgttccatcgcgatatatgcgcgataatattgaaaatcaatcatattcttccatattacctcaagttccagttattgatatgaaaaaattgctggaaattggagatattgatgatgattcggaactcgtgaggcttcatctcgcttgcaaagaatggggattttttcagctggtgaatcatggagtgaattcctcattgatgaagaaagtgaaatcggaaatcagagcatttttcgatctaccaatggaagagaagacgaaattcgagcaagaagaaggagatctcgaaggatacgggcaagcatttgttgtatctgaagagcaaaagttagattgggctgatatactttacatgatcactctccctactcatttgcgaaaacctcacttgtttccaaagcttcctgcctcgttcaaggatgcattggaacaatactcaagagcactgaaggaacttgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0212P19.2" temp_strand="-" temp_description="C02HBa0212P19.2  AC215423.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0212P19 sequenced_by:kribb upload_account_name:korea">
        <position start="10999" stop="9414"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10699" g_stop="10368" g_length="332"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="334" r_length="334" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10367" i_stop="10075" i_length="293">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="10074" g_stop="9827" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="335" r_stop="582" r_length="248" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="9826" i_stop="9756" i_length="71">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.784" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="9755" g_stop="9714" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="583" r_stop="624" r_length="42" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0212P19.2" gen_strand="-" ref_id="SGN-E329895" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>622</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0212P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E329895" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10699" e_stop="10368"/>
          <exon e_start="10074" e_stop="9827"/>
          <exon e_start="9755" e_stop="9714"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATACACGTTATTATTTCATATCTCAATAAGTTTACTTTGTAAAACAAGTTTGAGG-GAGAAAAAA-AATACAAACTTCATCAATGGAAGAAGCAAAGTTGAGAAAGCTAGGTGGTTCTCTGAAAGTCCCTAACGTTCAAGAACTTGCAAAGCAACAACTAGCAGCCGTTCCATCGCGATATATGCGCGATGATATTGAAAATCAATCATATTCTTCCATATTACCTCAAGTTCCAGTTATTGATATGAAAAAATTGCTGGAAATTGGAGATATTGATGATGATTCGGAACTCGTGAGGCTTCATCTCGCTTGCAAAGAATGGGGATTTTTTCAGGTTTATATATCAAAAAAACACTTTTTTTAAAAAAATTATTGTTTTATGTTACAGAAATGTTGGAGTTGACTTATTTAACCATCAATAATACAACTGCACTCCAAAACATACAATAATCTTATTAAATATAACAAGTGATATTCTTTTTTTTGACGTATTGAAACTAACCTAGGAAGAAACAAAATTTAACAATCTTTTTGATTACCGATCATATCTTTTAATTTAAAAATAAACTGATGTATCTTCGTGTCGCATGATGATATCGATTTTTTTAAAAAAAAATACATGTGCAGCTGGTGAATCATGGAGTGAATTCCTCATTGATGAAGAAAGTGAAATCGGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGACGAAATTCGAGCAAGAAGAAGGAGATCTCGAAGGATACGGGCAAGCATTTGTTGTATCTGAAGAACAAAAGTTAGATTGGGCTGATATACTTTACATGATCACTCTCCCTACTCATTTGCGAAAACCTCACTTGTTTCCAAAGCTTCCTGCCTCGTTCAGGTACGATAATATATAACTGAGTTTACGATTAAATATTTAGTTCACAATATTTAAATTCTTGGACCGATAAGGGATGCATTGGAACAATACTCAAGAACACTGAAGGAACTTGC</genome_strand>
        <mrna_strand>ATACACGTTATTATTTCATATCTCAATAAGTTTACTTTGTAAAACAAGTTTGAGGAAAAAAAAAATAATACAAACTTCATCAATGGAAGAAGCAAAGTTGAGAAAGCTAGGTGGTTCTCTGAAAGTCCCTAACGTTCAAGAACTTGCAAAGCAACAACTAGCAGCCGTTCCATCGCGATATATGCGCGATAATATTGAAAATCAATCATATTCTTCCATATTACCTCAAGTTCCAGTTATTGATATGAAAAAATTGCTGGAAATTGGAGATATTGATGATGATTCGGAACTCGTGAGGCTTCATCTCGCTTGCAAAGAATGGGGATTTTTTCAG.....................................................................................................................................................................................................................................................................................................CTGGTGAATCATGGAGTGAATTCCTCATTGATGAAGAAAGTGAAATCGGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGACGAAATTCGAGCAAGAAGAAGGAGATCTCGAAGGATACGGGCAAGCATTTGTTGTATCTGAAGAGCAAAAGTTAGATTGGGCTGATATACTTTACATGATCACTCTCCCTACTCATTTGCGAAAACCTCACTTGTTTCCAAAGCTTCCTGCCTCGTTCAA.......................................................................GGATGCATTGGAACAATACTCAAGAGCACTGAAGGAACTTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E330283" ref_strand="+" ref_description="SGN-E330283 [cTOD-4-H9]">
      <seq>attatttcatatctcaataagtttactttgtaaaacaagtttgaggaaaaaaaaaataatacaaacttcatcaatggaagaagcaaagttgagaaagctaggtggttctctgaaagtccctaacgttcaagaacttgcaaagcaacaactagcagccgttccatcgcgatatatgcgcgataatattgaaaatcaatcatattcttccatattacctcaagttccagttattgatatgaaaaaattgctggaaattggagatattgatgatgattcggaactcgtgaggcttcatctcgcttgcaaagaatggggattttttcagctggtgaatcatggagtgaattcctcattgatgaagaaagtgaaatcggaaatcagagcatttttcgatctaccaatggaagagaagacgaaattcgagcaagaagaaggagatctcgaaggatacgggcaagcatttgttgtatctgaagagcaaaagttagattgggctgatatactttacatgatcactctccctactcatttgcgaaaacctcacttgtttccaaagcttcctgcctcgttcagggatgcattggaacaatactc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0212P19.2" temp_strand="-" temp_description="C02HBa0212P19.2  AC215423.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0212P19 sequenced_by:kribb upload_account_name:korea">
        <position start="10990" stop="9435"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10690" g_stop="10368" g_length="323"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="325" r_length="325" r_score="0.978"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10367" i_stop="10075" i_length="293">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="10074" g_stop="9827" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="326" r_stop="573" r_length="248" r_score="0.996"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="9826" i_stop="9756" i_length="71">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.784" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="9755" g_stop="9735" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="574" r_stop="594" r_length="21" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0212P19.2" gen_strand="-" ref_id="SGN-E330283" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>592</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0212P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E330283" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10690" e_stop="10368"/>
          <exon e_start="10074" e_stop="9827"/>
          <exon e_start="9755" e_stop="9735"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTATTTCATATCTCAATAAGTTTACTTTGTAAAACAAGTTTGAGG-GAGAAAAAA-AATACAAACTTCATCAATGGAAGAAGCAAAGTTGAGAAAGCTAGGTGGTTCTCTGAAAGTCCCTAACGTTCAAGAACTTGCAAAGCAACAACTAGCAGCCGTTCCATCGCGATATATGCGCGATGATATTGAAAATCAATCATATTCTTCCATATTACCTCAAGTTCCAGTTATTGATATGAAAAAATTGCTGGAAATTGGAGATATTGATGATGATTCGGAACTCGTGAGGCTTCATCTCGCTTGCAAAGAATGGGGATTTTTTCAGGTTTATATATCAAAAAAACACTTTTTTTAAAAAAATTATTGTTTTATGTTACAGAAATGTTGGAGTTGACTTATTTAACCATCAATAATACAACTGCACTCCAAAACATACAATAATCTTATTAAATATAACAAGTGATATTCTTTTTTTTGACGTATTGAAACTAACCTAGGAAGAAACAAAATTTAACAATCTTTTTGATTACCGATCATATCTTTTAATTTAAAAATAAACTGATGTATCTTCGTGTCGCATGATGATATCGATTTTTTTAAAAAAAAATACATGTGCAGCTGGTGAATCATGGAGTGAATTCCTCATTGATGAAGAAAGTGAAATCGGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGACGAAATTCGAGCAAGAAGAAGGAGATCTCGAAGGATACGGGCAAGCATTTGTTGTATCTGAAGAACAAAAGTTAGATTGGGCTGATATACTTTACATGATCACTCTCCCTACTCATTTGCGAAAACCTCACTTGTTTCCAAAGCTTCCTGCCTCGTTCAGGTACGATAATATATAACTGAGTTTACGATTAAATATTTAGTTCACAATATTTAAATTCTTGGACCGATAAGGGATGCATTGGAACAATACTC</genome_strand>
        <mrna_strand>ATTATTTCATATCTCAATAAGTTTACTTTGTAAAACAAGTTTGAGGAAAAAAAAAATAATACAAACTTCATCAATGGAAGAAGCAAAGTTGAGAAAGCTAGGTGGTTCTCTGAAAGTCCCTAACGTTCAAGAACTTGCAAAGCAACAACTAGCAGCCGTTCCATCGCGATATATGCGCGATAATATTGAAAATCAATCATATTCTTCCATATTACCTCAAGTTCCAGTTATTGATATGAAAAAATTGCTGGAAATTGGAGATATTGATGATGATTCGGAACTCGTGAGGCTTCATCTCGCTTGCAAAGAATGGGGATTTTTTCAG.....................................................................................................................................................................................................................................................................................................CTGGTGAATCATGGAGTGAATTCCTCATTGATGAAGAAAGTGAAATCGGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGACGAAATTCGAGCAAGAAGAAGGAGATCTCGAAGGATACGGGCAAGCATTTGTTGTATCTGAAGAGCAAAAGTTAGATTGGGCTGATATACTTTACATGATCACTCTCCCTACTCATTTGCGAAAACCTCACTTGTTTCCAAAGCTTCCTGCCTCGTTCAG.......................................................................GGATGCATTGGAACAATACTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E331660" ref_strand="+" ref_description="SGN-E331660 [cTOD-7-G14]">
      <seq>ttatatgatacacgttattatttcatatctcaataagtttactttgtaaaacaagtttgaggaaaaaaaaaataatacaaacttcatcaatggaagaagcaaagttgagaaagctaggtggttctctgaaagtccctaacgttcaagaacttgcaaagcaacaactagcagccgttccatcgcgatatatgcgcgataatattgaaaatcaatcatattcttccatattacctcaagttccagttattgatatgaaaaaattgctggaaattggagatattgatgatgattcggaactcgtgaggcttcatctcgcttgcaaagaatggggattttttcagctggtgaatcatggagtgaattcctcattgatgaagaaagtgaaatcggaaatcagagcatttttcgatctaccaatggaagagaagacgaaattcgagcaagaagaaggagatctcgaaggatacgggcaagcatttgttgtatctgaagagcaaaagttagattgggctgatatactttacatgatcactctccctactcatttgcgaaaacctcacttgtttccaaagcttcctgcctcgttcagggatgcattggaacaatact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0212P19.2" temp_strand="-" temp_description="C02HBa0212P19.2  AC215423.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0212P19 sequenced_by:kribb upload_account_name:korea">
        <position start="11006" stop="9436"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10706" g_stop="10368" g_length="339"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="341" r_length="341" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10367" i_stop="10075" i_length="293">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="10074" g_stop="9827" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="342" r_stop="589" r_length="248" r_score="0.996"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="9826" i_stop="9756" i_length="71">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.784" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="9755" g_stop="9736" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="590" r_stop="609" r_length="20" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0212P19.2" gen_strand="-" ref_id="SGN-E331660" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>607</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0212P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E331660" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10706" e_stop="10368"/>
          <exon e_start="10074" e_stop="9827"/>
          <exon e_start="9755" e_stop="9736"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATATGATACACGTTATTATTTCATATCTCAATAAGTTTACTTTGTAAAACAAGTTTGAGG-GAGAAAAAA-AATACAAACTTCATCAATGGAAGAAGCAAAGTTGAGAAAGCTAGGTGGTTCTCTGAAAGTCCCTAACGTTCAAGAACTTGCAAAGCAACAACTAGCAGCCGTTCCATCGCGATATATGCGCGATGATATTGAAAATCAATCATATTCTTCCATATTACCTCAAGTTCCAGTTATTGATATGAAAAAATTGCTGGAAATTGGAGATATTGATGATGATTCGGAACTCGTGAGGCTTCATCTCGCTTGCAAAGAATGGGGATTTTTTCAGGTTTATATATCAAAAAAACACTTTTTTTAAAAAAATTATTGTTTTATGTTACAGAAATGTTGGAGTTGACTTATTTAACCATCAATAATACAACTGCACTCCAAAACATACAATAATCTTATTAAATATAACAAGTGATATTCTTTTTTTTGACGTATTGAAACTAACCTAGGAAGAAACAAAATTTAACAATCTTTTTGATTACCGATCATATCTTTTAATTTAAAAATAAACTGATGTATCTTCGTGTCGCATGATGATATCGATTTTTTTAAAAAAAAATACATGTGCAGCTGGTGAATCATGGAGTGAATTCCTCATTGATGAAGAAAGTGAAATCGGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGACGAAATTCGAGCAAGAAGAAGGAGATCTCGAAGGATACGGGCAAGCATTTGTTGTATCTGAAGAACAAAAGTTAGATTGGGCTGATATACTTTACATGATCACTCTCCCTACTCATTTGCGAAAACCTCACTTGTTTCCAAAGCTTCCTGCCTCGTTCAGGTACGATAATATATAACTGAGTTTACGATTAAATATTTAGTTCACAATATTTAAATTCTTGGACCGATAAGGGATGCATTGGAACAATACT</genome_strand>
        <mrna_strand>TTATATGATACACGTTATTATTTCATATCTCAATAAGTTTACTTTGTAAAACAAGTTTGAGGAAAAAAAAAATAATACAAACTTCATCAATGGAAGAAGCAAAGTTGAGAAAGCTAGGTGGTTCTCTGAAAGTCCCTAACGTTCAAGAACTTGCAAAGCAACAACTAGCAGCCGTTCCATCGCGATATATGCGCGATAATATTGAAAATCAATCATATTCTTCCATATTACCTCAAGTTCCAGTTATTGATATGAAAAAATTGCTGGAAATTGGAGATATTGATGATGATTCGGAACTCGTGAGGCTTCATCTCGCTTGCAAAGAATGGGGATTTTTTCAG.....................................................................................................................................................................................................................................................................................................CTGGTGAATCATGGAGTGAATTCCTCATTGATGAAGAAAGTGAAATCGGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGACGAAATTCGAGCAAGAAGAAGGAGATCTCGAAGGATACGGGCAAGCATTTGTTGTATCTGAAGAGCAAAAGTTAGATTGGGCTGATATACTTTACATGATCACTCTCCCTACTCATTTGCGAAAACCTCACTTGTTTCCAAAGCTTCCTGCCTCGTTCAG.......................................................................GGATGCATTGGAACAATACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E331653" ref_strand="+" ref_description="SGN-E331653 [cTOD-7-C16]">
      <seq>ttatattttacacgttattatttcatatgggaatagggttactttgtaaaacaagtttgaggaaaaaaaaaataatacaaacttcatcaatggaagaagcaaagttgagaaagctaggtggttctctgaaagtccctaacgttcaagaacttgcaaagcaacaactagcagccgttccatcgcgatatatgcgcgataatattgaaaatcaatcatattcttccatattacctcaagttccagttattgatatgaaaaaattgctggaaattggagatattgatgatgattcggaactcgtgaggcttcatctcgcttgcaaagaatggggattttttcagctggtgaatcatggagtgaattcctcattgatgaagaaagtgaaatcggaaatcagagcatttttcgatctaccaatggaagagaagacgaaattcgagcaagaagaaggagatctcgaaggatacgggcaagcctttgttggatctgaagagcaaaagttagattgggctgatatactttacatgatcac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0212P19.2" temp_strand="-" temp_description="C02HBa0212P19.2  AC215423.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0212P19 sequenced_by:kribb upload_account_name:korea">
        <position start="11006" stop="9584"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10706" g_stop="10368" g_length="339"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="341" r_length="341" r_score="0.959"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10367" i_stop="10075" i_length="293">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="10074" g_stop="9884" g_length="191"/>
          <reference_exon_boundary r_type="cDNA" r_start="342" r_stop="532" r_length="191" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0212P19.2" gen_strand="-" ref_id="SGN-E331653" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>530</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0212P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E331653" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10706" e_stop="10368"/>
          <exon e_start="10074" e_stop="9884"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATATGATACACGTTATTATTTCATATCTCAATAAGTTTACTTTGTAAAACAAGTTTGAGG-GAGAAAAAA-AATACAAACTTCATCAATGGAAGAAGCAAAGTTGAGAAAGCTAGGTGGTTCTCTGAAAGTCCCTAACGTTCAAGAACTTGCAAAGCAACAACTAGCAGCCGTTCCATCGCGATATATGCGCGATGATATTGAAAATCAATCATATTCTTCCATATTACCTCAAGTTCCAGTTATTGATATGAAAAAATTGCTGGAAATTGGAGATATTGATGATGATTCGGAACTCGTGAGGCTTCATCTCGCTTGCAAAGAATGGGGATTTTTTCAGGTTTATATATCAAAAAAACACTTTTTTTAAAAAAATTATTGTTTTATGTTACAGAAATGTTGGAGTTGACTTATTTAACCATCAATAATACAACTGCACTCCAAAACATACAATAATCTTATTAAATATAACAAGTGATATTCTTTTTTTTGACGTATTGAAACTAACCTAGGAAGAAACAAAATTTAACAATCTTTTTGATTACCGATCATATCTTTTAATTTAAAAATAAACTGATGTATCTTCGTGTCGCATGATGATATCGATTTTTTTAAAAAAAAATACATGTGCAGCTGGTGAATCATGGAGTGAATTCCTCATTGATGAAGAAAGTGAAATCGGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGACGAAATTCGAGCAAGAAGAAGGAGATCTCGAAGGATACGGGCAAGCATTTGTTGTATCTGAAGAACAAAAGTTAGATTGGGCTGATATACTTTACATGATCAC</genome_strand>
        <mrna_strand>TTATATTTTACACGTTATTATTTCATATGGGAATAGGGTTACTTTGTAAAACAAGTTTGAGGAAAAAAAAAATAATACAAACTTCATCAATGGAAGAAGCAAAGTTGAGAAAGCTAGGTGGTTCTCTGAAAGTCCCTAACGTTCAAGAACTTGCAAAGCAACAACTAGCAGCCGTTCCATCGCGATATATGCGCGATAATATTGAAAATCAATCATATTCTTCCATATTACCTCAAGTTCCAGTTATTGATATGAAAAAATTGCTGGAAATTGGAGATATTGATGATGATTCGGAACTCGTGAGGCTTCATCTCGCTTGCAAAGAATGGGGATTTTTTCAG.....................................................................................................................................................................................................................................................................................................CTGGTGAATCATGGAGTGAATTCCTCATTGATGAAGAAAGTGAAATCGGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGACGAAATTCGAGCAAGAAGAAGGAGATCTCGAAGGATACGGGCAAGCCTTTGTTGGATCTGAAGAGCAAAAGTTAGATTGGGCTGATATACTTTACATGATCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E331661" ref_strand="+" ref_description="SGN-E331661 [cTOD-7-G16]">
      <seq>cgaaaaaaaaaataatacaaacttcatcaatggaagaagcaaagttgagaaagcaaggagggtctctgaaagtccctaacgttcaagaacttgcaaagcaacaactagcaggcgttccatcgcgatatatgcgcgataatattgaaaatgaatcatattcttccatattacctcaagttccagttattgatatgaaaaaatagctggaaattggagatattgatgatgattcggaactcgtgaggcttcatctcgcttgcaaagaatggggattttttcagctggtgaatcatggagtgaatccctcattgatgaagaaagtgaaataggaaatcagagcatctttcgatctaccaatggaaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0212P19.2" temp_strand="-" temp_description="C02HBa0212P19.2  AC215423.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0212P19 sequenced_by:kribb upload_account_name:korea">
        <position start="10943" stop="9692"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10649" g_stop="10368" g_length="282"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="281" r_length="281" r_score="0.954"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10367" i_stop="10075" i_length="293">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="10074" g_stop="9992" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="282" r_stop="364" r_length="83" r_score="0.964"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0212P19.2" gen_strand="-" ref_id="SGN-E331661" ref_strand="+">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>365</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0212P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E331661" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10649" e_stop="10368"/>
          <exon e_start="10074" e_stop="9992"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGGGAGAAAAAAAATACAAACTTCATCAATGGAAGAAGCAAAGTTGAGAAAGCTAGGTGGTTCTCTGAAAGTCCCTAACGTTCAAGAACTTGCAAAGCAACAACTAGCAGCCGTTCCATCGCGATATATGCGCGATGATATTGAAAATCAATCATATTCTTCCATATTACCTCAAGTTCCAGTTATTGATATGAAAAAATTGCTGGAAATTGGAGATATTGATGATGATTCGGAACTCGTGAGGCTTCATCTCGCTTGCAAAGAATGGGGATTTTTTCAGGTTTATATATCAAAAAAACACTTTTTTTAAAAAAATTATTGTTTTATGTTACAGAAATGTTGGAGTTGACTTATTTAACCATCAATAATACAACTGCACTCCAAAACATACAATAATCTTATTAAATATAACAAGTGATATTCTTTTTTTTGACGTATTGAAACTAACCTAGGAAGAAACAAAATTTAACAATCTTTTTGATTACCGATCATATCTTTTAATTTAAAAATAAACTGATGTATCTTCGTGTCGCATGATGATATCGATTTTTTTAAAAAAAAATACATGTGCAGCTGGTGAATCATGGAGTGAATTCCTCATTGATGAAGAAAGTGAAATCGGAAATCAGAGCATTTTTCGATCTACCAATGGAAGA</genome_strand>
        <mrna_strand>CGAA-AAAAAAAATAATACAAACTTCATCAATGGAAGAAGCAAAGTTGAGAAAGCAAGGAGGGTCTCTGAAAGTCCCTAACGTTCAAGAACTTGCAAAGCAACAACTAGCAGGCGTTCCATCGCGATATATGCGCGATAATATTGAAAATGAATCATATTCTTCCATATTACCTCAAGTTCCAGTTATTGATATGAAAAAATAGCTGGAAATTGGAGATATTGATGATGATTCGGAACTCGTGAGGCTTCATCTCGCTTGCAAAGAATGGGGATTTTTTCAG.....................................................................................................................................................................................................................................................................................................CTGGTGAATCATGGAGTGAATCCCTCATTGATGAAGAAAGTGAAATAGGAAATCAGAGCATCTTTCGATCTACCAATGGAAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E330172" ref_strand="+" ref_description="SGN-E330172 [cTOD-5-J16]">
      <seq>atacacgttattatttcatatctcaataagtttactttgtaaaacaagtttgaggaaaaaaaaaataatacaaacttcatcaatggaagaagcaaagttgagaaagctaggtggttctctgaaagtccctaacgttcaagaacttgcaaagcaacaactagcagccgttccatcgcgatatatgcgcgataatattgaaaatcaatcatattcttccatattacctcaagttccagttattgatatgaaaaaattgctggaaattggagatattgatgatgattcggaactcgtgaggcttcatctcgcttgcaaagaatggggattttttcagctggtgaatcatggagtgaattcctcattgatgaagaaagtgaaatcggaaatcagagcatttttcgatctaccaatggaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0212P19.2" temp_strand="-" temp_description="C02HBa0212P19.2  AC215423.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0212P19 sequenced_by:kribb upload_account_name:korea">
        <position start="10999" stop="9693"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10699" g_stop="10368" g_length="332"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="334" r_length="334" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10367" i_stop="10075" i_length="293">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="10074" g_stop="9993" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="335" r_stop="416" r_length="82" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0212P19.2" gen_strand="-" ref_id="SGN-E330172" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>414</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0212P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E330172" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10699" e_stop="10368"/>
          <exon e_start="10074" e_stop="9993"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATACACGTTATTATTTCATATCTCAATAAGTTTACTTTGTAAAACAAGTTTGAGG-GAGAAAAAA-AATACAAACTTCATCAATGGAAGAAGCAAAGTTGAGAAAGCTAGGTGGTTCTCTGAAAGTCCCTAACGTTCAAGAACTTGCAAAGCAACAACTAGCAGCCGTTCCATCGCGATATATGCGCGATGATATTGAAAATCAATCATATTCTTCCATATTACCTCAAGTTCCAGTTATTGATATGAAAAAATTGCTGGAAATTGGAGATATTGATGATGATTCGGAACTCGTGAGGCTTCATCTCGCTTGCAAAGAATGGGGATTTTTTCAGGTTTATATATCAAAAAAACACTTTTTTTAAAAAAATTATTGTTTTATGTTACAGAAATGTTGGAGTTGACTTATTTAACCATCAATAATACAACTGCACTCCAAAACATACAATAATCTTATTAAATATAACAAGTGATATTCTTTTTTTTGACGTATTGAAACTAACCTAGGAAGAAACAAAATTTAACAATCTTTTTGATTACCGATCATATCTTTTAATTTAAAAATAAACTGATGTATCTTCGTGTCGCATGATGATATCGATTTTTTTAAAAAAAAATACATGTGCAGCTGGTGAATCATGGAGTGAATTCCTCATTGATGAAGAAAGTGAAATCGGAAATCAGAGCATTTTTCGATCTACCAATGGAAG</genome_strand>
        <mrna_strand>ATACACGTTATTATTTCATATCTCAATAAGTTTACTTTGTAAAACAAGTTTGAGGAAAAAAAAAATAATACAAACTTCATCAATGGAAGAAGCAAAGTTGAGAAAGCTAGGTGGTTCTCTGAAAGTCCCTAACGTTCAAGAACTTGCAAAGCAACAACTAGCAGCCGTTCCATCGCGATATATGCGCGATAATATTGAAAATCAATCATATTCTTCCATATTACCTCAAGTTCCAGTTATTGATATGAAAAAATTGCTGGAAATTGGAGATATTGATGATGATTCGGAACTCGTGAGGCTTCATCTCGCTTGCAAAGAATGGGGATTTTTTCAG.....................................................................................................................................................................................................................................................................................................CTGGTGAATCATGGAGTGAATTCCTCATTGATGAAGAAAGTGAAATCGGAAATCAGAGCATTTTTCGATCTACCAATGGAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E434308" ref_strand="-" ref_description="SGN-E434308 [STM-59-B14]">
      <seq>caagagcctagctacgatcatcgtatgtcaattggccaaggctttaaggatggatgaaaaagaaatgcgagatatattcaatgatggtatgcagtcaatgaggatgaattattatccaccttgccctgagccagacagggcaattggctttagccctcattcttgatgctgatgccctcaccatccttttccaactaaatgaaactgaaggtctccaagtccgaagagacggcatttgggtgcctatacagccccttccaaatgctttgattgtgtatattggcgatatggagatagtaagcaatggtgtttataagagcattgaacacagagcaattgtaaactcaaacaaagagaggctctctgttacagctttctctatcttcaaccttgattccgaattaggacctgcacacagcctcattggaccgaataatcctccaattttccgaagtgttgtcatgcaaaaatatttactggattattttgcacgaaaacttgacggaaaatcataccttgatgtcatgaagttagaggccggtaatggagaatcctaggtagcatttgatatataagttactcttgccattgaaatttgtagttcccctgtttgattactataaaaaaaaaaaaaaaaaaactcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0212P19.2" temp_strand="-" temp_description="C02HBa0212P19.2  AC215423.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0212P19 sequenced_by:kribb upload_account_name:korea">
        <position start="23843" stop="5075"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13696" g_stop="13402" g_length="295"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="293" r_length="293" r_score="0.905"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="13401" i_stop="13281" i_length="121">
            <donor d_prob="0.999" d_score="0.86"/>
            <acceptor a_prob="0.999" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="13280" g_stop="12968" g_length="313"/>
          <reference_exon_boundary r_type="cDNA" r_start="294" r_stop="605" r_length="312" r_score="0.907"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="12967" i_stop="11714" i_length="1254">
            <donor d_prob="0.000" d_score="0.84"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="11713" g_stop="11675" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="606" r_stop="644" r_length="39" r_score="0.667"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0212P19.2" gen_strand="-" ref_id="SGN-E434308" ref_strand="-">
        <total_alignment_score>0.906</total_alignment_score>
        <cumulative_length_of_scored_exons>647</cumulative_length_of_scored_exons>
        <coverage percentage="1.005" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0212P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E434308" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="13696" e_stop="13402"/>
          <exon e_start="13280" e_stop="12968"/>
          <exon e_start="11713" e_stop="11675"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAGAGCCTAGCAATGATCATCGTATGTCACTTGGCAAAGGCTTTAAGGATAGATGAAAATGAAATGAGAGAGCTATTCAGTGATGGTGTGCAGTCAATGAGGATGAATTATTATCCGCCTTGCCCTGAGCCAGACAGGGCAATTGGCTTAAGCCCTCATTC-TGATGCTGATGCCCTCACCATCCTTTTCCAGCTCGATGAAACTGAAGGTCTCCAAGTTCGAAAAGACGACATTTGGGTGCCTATAAAGCCCCTCCCAAATGCTTTGATTGTTAATATTGGCGATATGATGGAGGTAGGTAAATAACAACTTTTTCTTGAAAGAACTTAATGTGGACTAAATATAAAGAAATATCACTAATCCGTTTACTTGGATCGGAAAATGTAATGTAACATGTTTTATTTGACTTTGGCAGATATTGAGCAATGGTGTTTATAAGAGCATTGAGCACAGAGCAATTGTAAACTCAAACAAAGAGAGACTCTCTGTTGCAACATTCTCTACCTTCAACCTTGATTCCGAATTAGGACCTGCACATAGCCTCATTGGAACAAATAATCCTCCAATTTTCCGAAGAGTTGTCGTGCAAAAATATTTACAGGACTTTTTTGCACGAAAACTTGACGGAAAATCATACCTTGATGTCATGAAGGTAGAGGTGAGGAATGGAGAATCCTAGGTAGTATTTGATAATATAATTTACTCTTGGCGTTGAAATCTGGACTTCCATTACTATAAATAAGAAGATTCGAGTCTTCTTCATTTATTTTGTTTTAAGCATGTTCTTCCATCTCAAAAAAATTCATATTTTTTTTTGGAAAAGAGATTAAAAATTCTCCAATCTACTTTTTCCCCCCCTCAAATTAGCTAATGGTCATTTGCAATGTAAAATAGTCACATGCCATATTACGATTCGTCACATATGTAACTTAATTCAAAAGTTAAATCCACCAAATTCTCAAATCCATACCCCGTTATCTTTAACCTAAACCGCCCCTAATTACTTCAATTATATACAAAATATGTATAATATTTGTATGAAATCTGTATCAAAATTGAAGTTTTGAAGCCACAACAGCCACTTTCTCAATCGAAAATTCATAATCAGTTTGGGTGGAAGAAAGCCCCAACCACAGGCGCACTTACGCCGAGGGAAGTTTGGGTTTTCTTCAATGAGAACCTTGCCGGTAACGGATCGGTTCGCCGCCGATCCAATTTAAGAACTGAATCGGGTTTACAAGATGAGGTTTATGCTCAGTAGCAGCTCTTTGTTTAGGAGAAAATCACATCTTTTAACTACTACTAGAACAAAATCAAGGCTAATTGACCCACCTGAGCAAAGATTAATGGTTTACTATGAAATTTGGGATTTTAGAGAGAAGTACTGAATTTGAAGATGACGAAGGATTTACCAGAAGAGTATAAGAAAATGAAGTTAAAATAATTCTATGTTCTTTAGATGGTGAATTTGATTTTGATAATGGTTGCTTTTCTTTGTTATCTAACTATTAGAAAATTTAATAATAGTAAGTATATAAATAAATTTATTTTAACAGCAAGAGTATAATCTAATTAATAAGCTAAAACTGTTAGGTATTTTTGACAGATAATCAAACGACTCATTCTCTATATATATCTTAAATCATTTATAATTTATTTATTTATTATATTTTTATTAGTGTAGACATTGCTGATCAATTTTTTTTTATAAAGAAAAGGAAACATAAATTAAGTGAAAAAAACAGAAGATAAATAATTAATTAAAGTGATGGACAAACGGGATAAGATTTTGAACTTTATGGAGATATTTTGTTAAATTGTTCGGCAGGAACAAATTTGAATACGTAACCTCTGGACTATTTTTGTAATTTTTCCTTTTATTAATAAAAAATTAAATCCCATCTGCACCAAAAGTCACCTGAATATAGGTGACTAATTAGGCAAAATGATTAGAAATTGTAGGTATATTACCAGATGGACCACGTGTTTATTTACCCAAAAAAATGACATAAATAATCTCT</genome_strand>
        <mrna_strand>CAAGAGCCTAGCTACGATCATCGTATGTCAATTGGCCAAGGCTTTAAGGATGGATGAAAAAGAAATGCGAGATATATTCAATGATGGTATGCAGTCAATGAGGATGAATTATTATCCACCTTGCCCTGAGCCAGACAGGGCAATTGGCTTTAGCCCTCATTCTTGATGCTGATGCCCTCACCATCCTTTTCCAACTAAATGAAACTGAAGGTCTCCAAGTCCGAAGAGACGGCATTTGGGTGCCTATACAGCCCCTTCCAAATGCTTTGATTGTGTATATTGGCG--AT-ATGGAG.........................................................................................................................ATAGTAAGCAATGGTGTTTATAAGAGCATTGAACACAGAGCAATTGTAAACTCAAACAAAGAGAGGCTCTCTGTTACAGCTTTCTCTATCTTCAACCTTGATTCCGAATTAGGACCTGCACACAGCCTCATTGGACCGAATAATCCTCCAATTTTCCGAAGTGTTGTCATGCAAAAATATTTACTGGATTATTTTGCACGAAAACTTGACGGAAAATCATACCTTGATGTCATGAAGTTAGAGGCCGGTAATGGAGAATCCTAGGTAGCATTTGAT-ATATAAGTTACTCTTGCCATTGAAATTTGTAGTTCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGTTTGATTACTATAAAAAAAAAAAAAAAAAAACTCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E247762" ref_strand="+" ref_description="SGN-E247762 [cLEF-42-P11]">
      <seq>acaaatacataaacccaaaggtgaatgggatctatagttcgaaggagtcattgtatctatatctctgctattcttttccatcacacgttaataattttcaatttaattactaacaaagagtgacgacggtggccaaaatgaactttggaaaatctctgttagttcctagtgcccaagagcttgccaaacagcatctaaccaatattcccgccacgtatgtccgcccagaagaagaatctcccgtcatctatgccagagcatccgtcccagttatcgatctctacaagttgatttccatggattctgagctgcaaaagcttcactcggcttgccaacaatggggtttcctccaggttataaaccatggagtgacatcttcgttgttggaggatttcaagagagaggttattgatttgttcaaacttccaatggaagaaaagaagaaactatggcaacaggaagacagctttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0212P19.2" temp_strand="-" temp_description="C02HBa0212P19.2  AC215423.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0212P19 sequenced_by:kribb upload_account_name:korea">
        <position start="14855" stop="13692"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14555" g_stop="14203" g_length="353"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="353" r_length="353" r_score="0.955"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="14202" i_stop="14110" i_length="93">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.966" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14109" g_stop="13992" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="354" r_stop="471" r_length="118" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0212P19.2" gen_strand="-" ref_id="SGN-E247762" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>471</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0212P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E247762" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14555" e_stop="14203"/>
          <exon e_start="14109" e_stop="13992"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAATAGATAAACCCAAAGGTGAATGGGATCTATAGTTTGAAGGAGTCATTGTATCTATATCTCTGCTATTCTTTTCCATCAGACGTTAATAATTTTCAATTTAATTACTAACAAAGAGTGACGACGGTGGCAAAAATGAACTTTGGAAAATCTCTGTTAGTTCCTAGTGTTCAAGAGCTTGCCAAACAGCATCTAACCAATATTCCGGCCAGGTATGTCCGCCCAGAAGAAGAATCTCCGGTCATATATGCCGGAGCATCGGTCCCAGTTATCGATCTTCAAAAGTTGATTTCCATGGATTCTGAGCTGCAAAAGCTTCACTCGGCTTGCCAACAATGGGGTTTCCTCCAGGTTCCATTTTTTTTTTTTTGCTTTGAAAATGGTTCTTAAGGGGTATATGTATTGACCTTTTGAGAAATTAGCTTGCATATTATTGAATGATAGGTTATAAACCATGGAGTGACATCTTCGTTGTTGGAGGATTTCAAGAGAGAGGTTATTGATTTGTTCAAACTTCCAATGGAAGAAAAGAAGAAACTATGGCAACAGGAAGACAGCTTTG</genome_strand>
        <mrna_strand>ACAAATACATAAACCCAAAGGTGAATGGGATCTATAGTTCGAAGGAGTCATTGTATCTATATCTCTGCTATTCTTTTCCATCACACGTTAATAATTTTCAATTTAATTACTAACAAAGAGTGACGACGGTGGCCAAAATGAACTTTGGAAAATCTCTGTTAGTTCCTAGTGCCCAAGAGCTTGCCAAACAGCATCTAACCAATATTCCCGCCACGTATGTCCGCCCAGAAGAAGAATCTCCCGTCATCTATGCCAGAGCATCCGTCCCAGTTATCGATCTCTACAAGTTGATTTCCATGGATTCTGAGCTGCAAAAGCTTCACTCGGCTTGCCAACAATGGGGTTTCCTCCAG.............................................................................................GTTATAAACCATGGAGTGACATCTTCGTTGTTGGAGGATTTCAAGAGAGAGGTTATTGATTTGTTCAAACTTCCAATGGAAGAAAAGAAGAAACTATGGCAACAGGAAGACAGCTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E395848" ref_strand="+" ref_description="SGN-E395848 [TUS-17-P18]">
      <seq>cccggaaaaattgaactttggaaaatctctgttagttccaagtgttcaagagcttgccaaacagcacctaaccattatcccagacaggtatctccagccagagcaagaaactccggtcatttccgccggagcggaggttccagttatcgatgttcaaaagttgatttcaggtgattccatggattctgagctgcaaaagcttcactctgcttgccaacaatggggtttcctacaggttataaaccatggggtgacacctttgctcttggaggacttcaagagagaggttattgaattgttcaaacttccaatggaagaaaagaagaagctatggaaacaggaagacagcttggaaggtttcgggcatgcattcgttgtgtctgaagagcagaaacttgattggagtgacaggtttggcatactgactcttcctcctcatatccgcaaagtggatttgtttcagaagttgccctcgaagctcagggatatcatggaagcatactgcaaagaaattaagagcctagcaacgagcattatatgtcaattggcaaaggctttaaggatggacgaagaggaaatgagagatctattcaatgatggtatgcagacgctgaggatgaattattatccgccttgccctgagccagacaaggcaattggcataacccctcattctgatgccgatgcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0212P19.2" temp_strand="-" temp_description="C02HBa0212P19.2  AC215423.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0212P19 sequenced_by:kribb upload_account_name:korea">
        <position start="20091" stop="17983"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19791" g_stop="19557" g_length="235"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="235" r_length="235" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19556" i_stop="18944" i_length="613">
            <donor d_prob="0.965" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18943" g_stop="18696" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="236" r_stop="483" r_length="248" r_score="0.996"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18695" i_stop="18488" i_length="208">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18487" g_stop="18283" g_length="205"/>
          <reference_exon_boundary r_type="cDNA" r_start="484" r_stop="688" r_length="205" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0212P19.2" gen_strand="-" ref_id="SGN-E395848" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>688</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0212P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E395848" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19791" e_stop="19557"/>
          <exon e_start="18943" e_stop="18696"/>
          <exon e_start="18487" e_stop="18283"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCGGAAAAATTGAACTTTGGAAAATCTCTGTTAGTTCCAAGTGTTCAAGAGCTTGCCAAACAGCACCTAACCATTATCCCAGACAGGTATCTCCGGCCAGAGCAAGAAACTCCGGTCATTTCCGCCGGAGCGGAGGTTCCAGTTATCGATGTTCAAAAGTTGATTTCAGGTGATTCCATGGATTCTGAGCTGCAAAAGCTTCACTCTGCTTGCCAACAATGGGGTTTCCTACAGGTTTCATGTTCTTCATGATTTTGTTTTATTGTGCGAATAAATTTTATTTGCGAAGCTTCAAAAACACTCCTAAAGTTTATGTTTTTCTCTCACTAATGTGAATTTCCTACTTTTAACTATTAACAAATGTTTATCGAAATACAATTCATGTATCAAATGTTCATTTTTACTACGATGATATTTCAAGTAGGAAAAGGATACAACTGTAGTAGAAATAAGCAACTTTTATAAATCTTGGCCAAACATATTCTATTCTTAACGTTATTTTCATCTATTTAGTTCAAATTAAACATATAAGACATGTAAAAACTTATTTTCAGCTTTCCTTCCCCCATTAAAAGTGTTCAGATTTTAAATAAACTGTAATATCAGAATAATAGATTCTAAAATGCATAATCCTTTGTTAAGGGAAAAATTCCCACATCGGTTGGGCTCGTTATAAGGCGTGACCAATCCTCCTCCCTATGAGTTAGCTTTTGGGGCGTGAGTTAGGCCCAAACCTAATTTTAACAAAGATCACTTTAGAAAAGTGACTTCTTGTTTTCTTGTAGAGTGCCTAGATTTGTAATTTTTAAAAGGTTAATGAATTTGCTAGCATATTGTTGAATGTTAGGTTATAAACCATGGGGTGACACCTTTGCTCTTGGAGGACTTCAAGAGAGAGGTTATTGAATTGTTCAAACTTCCAATGGAAGAAAAGAAGAAGCTATGGAAACAGGAAGACAGCTTGGAAGGTTTCGGGCATGCATTCGTTGTGTCTGAAGATCAGAAACTTGATTGGAGTGACAGGTTTGGCATACTGACTCTTCCTCCTCATATCCGCAAAGTGGATTTGTTTCAGAAGTTGCCCTCGAAGCTCAGGTGCCTGTCTCCTTACTAGATTATTACTCTATTTGAGTGTTCATTACTTAAACAATCATTGATAAAGGAGAACACAATTACTTTTGGTTTTTTATAAATTAGGTAACCAGATTGTTAACTATACTTTTTGTTAAAAACTTGTATTTCTAACTTGTGCCTTGATCTTCGCACTCTAAGATTTTAATATGTTTATGTGTTTGAAATGCAGGGATATCATGGAAGCATACTGCAAAGAAATTAAGAGCCTAGCAACGAGCATTATATGTCAATTGGCAAAGGCTTTAAGGATGGACGAAGAGGAAATGAGAGATCTATTCAATGATGGTATGCAGACGCTGAGGATGAATTATTATCCGCCTTGCCCTGAGCCAGACAAGGCAATTGGCATAAGCCCTCATTCTGATGCCGATGCC</genome_strand>
        <mrna_strand>CCCGGAAAAATTGAACTTTGGAAAATCTCTGTTAGTTCCAAGTGTTCAAGAGCTTGCCAAACAGCACCTAACCATTATCCCAGACAGGTATCTCCAGCCAGAGCAAGAAACTCCGGTCATTTCCGCCGGAGCGGAGGTTCCAGTTATCGATGTTCAAAAGTTGATTTCAGGTGATTCCATGGATTCTGAGCTGCAAAAGCTTCACTCTGCTTGCCAACAATGGGGTTTCCTACAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATAAACCATGGGGTGACACCTTTGCTCTTGGAGGACTTCAAGAGAGAGGTTATTGAATTGTTCAAACTTCCAATGGAAGAAAAGAAGAAGCTATGGAAACAGGAAGACAGCTTGGAAGGTTTCGGGCATGCATTCGTTGTGTCTGAAGAGCAGAAACTTGATTGGAGTGACAGGTTTGGCATACTGACTCTTCCTCCTCATATCCGCAAAGTGGATTTGTTTCAGAAGTTGCCCTCGAAGCTCAG................................................................................................................................................................................................................GGATATCATGGAAGCATACTGCAAAGAAATTAAGAGCCTAGCAACGAGCATTATATGTCAATTGGCAAAGGCTTTAAGGATGGACGAAGAGGAAATGAGAGATCTATTCAATGATGGTATGCAGACGCTGAGGATGAATTATTATCCGCCTTGCCCTGAGCCAGACAAGGCAATTGGCATAACCCCTCATTCTGATGCCGATGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E207227" ref_strand="+" ref_description="SGN-E207227 [cLEC-30-B22]">
      <seq>ccggaaaaattgaactttggaaaatctctgttagttccaagtgttcaagagcttgccaaacagcacctaaccattatcccagacaggtatctccagccagagcaagaaactccggtcatttccgccggagcggaggttccagttatcgatgttcaaaagttgatttcaggtgattccatggattctgagctgcaaaagcttcactctgcttgccaacaatggggtttcctacaggttataaaccatggggtgacacctttgctcttggaggacttcaagagagaggttattgaattgttcaaacttccaatggaagaaaagaagaagctatggaaacaggaagacagcttggaaggtttcgggcatgcattcgttgtgtctgaagagcacaaacttgattggagtgacaggtttggcatactgactcttcctcctcatatccgcaaagtggatttgtttcagaagttgccctcgaagctcagggatatcatggaagcatactgcaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0212P19.2" temp_strand="-" temp_description="C02HBa0212P19.2  AC215423.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0212P19 sequenced_by:kribb upload_account_name:korea">
        <position start="20090" stop="18162"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19790" g_stop="19557" g_length="234"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="234" r_length="234" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19556" i_stop="18944" i_length="613">
            <donor d_prob="0.965" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18943" g_stop="18696" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="235" r_stop="482" r_length="248" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18695" i_stop="18488" i_length="208">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18487" g_stop="18462" g_length="26"/>
          <reference_exon_boundary r_type="cDNA" r_start="483" r_stop="508" r_length="26" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0212P19.2" gen_strand="-" ref_id="SGN-E207227" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>508</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0212P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E207227" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19790" e_stop="19557"/>
          <exon e_start="18943" e_stop="18696"/>
          <exon e_start="18487" e_stop="18462"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGGAAAAATTGAACTTTGGAAAATCTCTGTTAGTTCCAAGTGTTCAAGAGCTTGCCAAACAGCACCTAACCATTATCCCAGACAGGTATCTCCGGCCAGAGCAAGAAACTCCGGTCATTTCCGCCGGAGCGGAGGTTCCAGTTATCGATGTTCAAAAGTTGATTTCAGGTGATTCCATGGATTCTGAGCTGCAAAAGCTTCACTCTGCTTGCCAACAATGGGGTTTCCTACAGGTTTCATGTTCTTCATGATTTTGTTTTATTGTGCGAATAAATTTTATTTGCGAAGCTTCAAAAACACTCCTAAAGTTTATGTTTTTCTCTCACTAATGTGAATTTCCTACTTTTAACTATTAACAAATGTTTATCGAAATACAATTCATGTATCAAATGTTCATTTTTACTACGATGATATTTCAAGTAGGAAAAGGATACAACTGTAGTAGAAATAAGCAACTTTTATAAATCTTGGCCAAACATATTCTATTCTTAACGTTATTTTCATCTATTTAGTTCAAATTAAACATATAAGACATGTAAAAACTTATTTTCAGCTTTCCTTCCCCCATTAAAAGTGTTCAGATTTTAAATAAACTGTAATATCAGAATAATAGATTCTAAAATGCATAATCCTTTGTTAAGGGAAAAATTCCCACATCGGTTGGGCTCGTTATAAGGCGTGACCAATCCTCCTCCCTATGAGTTAGCTTTTGGGGCGTGAGTTAGGCCCAAACCTAATTTTAACAAAGATCACTTTAGAAAAGTGACTTCTTGTTTTCTTGTAGAGTGCCTAGATTTGTAATTTTTAAAAGGTTAATGAATTTGCTAGCATATTGTTGAATGTTAGGTTATAAACCATGGGGTGACACCTTTGCTCTTGGAGGACTTCAAGAGAGAGGTTATTGAATTGTTCAAACTTCCAATGGAAGAAAAGAAGAAGCTATGGAAACAGGAAGACAGCTTGGAAGGTTTCGGGCATGCATTCGTTGTGTCTGAAGATCAGAAACTTGATTGGAGTGACAGGTTTGGCATACTGACTCTTCCTCCTCATATCCGCAAAGTGGATTTGTTTCAGAAGTTGCCCTCGAAGCTCAGGTGCCTGTCTCCTTACTAGATTATTACTCTATTTGAGTGTTCATTACTTAAACAATCATTGATAAAGGAGAACACAATTACTTTTGGTTTTTTATAAATTAGGTAACCAGATTGTTAACTATACTTTTTGTTAAAAACTTGTATTTCTAACTTGTGCCTTGATCTTCGCACTCTAAGATTTTAATATGTTTATGTGTTTGAAATGCAGGGATATCATGGAAGCATACTGCAAAG</genome_strand>
        <mrna_strand>CCGGAAAAATTGAACTTTGGAAAATCTCTGTTAGTTCCAAGTGTTCAAGAGCTTGCCAAACAGCACCTAACCATTATCCCAGACAGGTATCTCCAGCCAGAGCAAGAAACTCCGGTCATTTCCGCCGGAGCGGAGGTTCCAGTTATCGATGTTCAAAAGTTGATTTCAGGTGATTCCATGGATTCTGAGCTGCAAAAGCTTCACTCTGCTTGCCAACAATGGGGTTTCCTACAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATAAACCATGGGGTGACACCTTTGCTCTTGGAGGACTTCAAGAGAGAGGTTATTGAATTGTTCAAACTTCCAATGGAAGAAAAGAAGAAGCTATGGAAACAGGAAGACAGCTTGGAAGGTTTCGGGCATGCATTCGTTGTGTCTGAAGAGCACAAACTTGATTGGAGTGACAGGTTTGGCATACTGACTCTTCCTCCTCATATCCGCAAAGTGGATTTGTTTCAGAAGTTGCCCTCGAAGCTCAG................................................................................................................................................................................................................GGATATCATGGAAGCATACTGCAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E319740" ref_strand="+" ref_description="SGN-E319740 [cTOB-12-C24]">
      <seq>tgattaaaaacccaaacccgaatttgatagaaattttcaagtttgtaacaagagccaatggattcaaccccggaaaaattgaactttggaaaatctctgttagttccaagtgttcaagagcttgccaaacagcacctaaccattatcccagacaggtatctccagccagagcaagaaactccggtcatttccgccggagcggaggttccagttatcgatgttcaaaagttgatttcaggtgattccatggattctgagctgcaaaagcttcactctgcttgccaacaatggggtttcctacaggttataaaccatggggtgacacctttgctcttggaggacttcaagagagaggttattgaattgttcaaacttccaatggaagaaaagaagaagctatggaaacaggaagacagcttggaaggtttcgggcatgcattcgttgtgtctgaagagcagaaacttgattggagtgacaggtttggcatactgactcttcctcctcatatccgcaaagtggatttgtttcagaagttgccctcgaagctcagggatatcatggaagcatact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0212P19.2" temp_strand="-" temp_description="C02HBa0212P19.2  AC215423.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0212P19 sequenced_by:kribb upload_account_name:korea">
        <position start="20159" stop="18168"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19859" g_stop="19557" g_length="303"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="303" r_length="303" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19556" i_stop="18944" i_length="613">
            <donor d_prob="0.965" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18943" g_stop="18696" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="304" r_stop="551" r_length="248" r_score="0.996"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18695" i_stop="18488" i_length="208">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18487" g_stop="18468" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="552" r_stop="571" r_length="20" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0212P19.2" gen_strand="-" ref_id="SGN-E319740" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>571</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0212P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E319740" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19859" e_stop="19557"/>
          <exon e_start="18943" e_stop="18696"/>
          <exon e_start="18487" e_stop="18468"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATTAAAAACCCAAACCCGAATTTGATAGAAATTTTCAAGTTTGTAACAAGAGCCAATGGATTCAACCCCGGAAAAATTGAACTTTGGAAAATCTCTGTTAGTTCCAAGTGTTCAAGAGCTTGCCAAACAGCACCTAACCATTATCCCAGACAGGTATCTCCGGCCAGAGCAAGAAACTCCGGTCATTTCCGCCGGAGCGGAGGTTCCAGTTATCGATGTTCAAAAGTTGATTTCAGGTGATTCCATGGATTCTGAGCTGCAAAAGCTTCACTCTGCTTGCCAACAATGGGGTTTCCTACAGGTTTCATGTTCTTCATGATTTTGTTTTATTGTGCGAATAAATTTTATTTGCGAAGCTTCAAAAACACTCCTAAAGTTTATGTTTTTCTCTCACTAATGTGAATTTCCTACTTTTAACTATTAACAAATGTTTATCGAAATACAATTCATGTATCAAATGTTCATTTTTACTACGATGATATTTCAAGTAGGAAAAGGATACAACTGTAGTAGAAATAAGCAACTTTTATAAATCTTGGCCAAACATATTCTATTCTTAACGTTATTTTCATCTATTTAGTTCAAATTAAACATATAAGACATGTAAAAACTTATTTTCAGCTTTCCTTCCCCCATTAAAAGTGTTCAGATTTTAAATAAACTGTAATATCAGAATAATAGATTCTAAAATGCATAATCCTTTGTTAAGGGAAAAATTCCCACATCGGTTGGGCTCGTTATAAGGCGTGACCAATCCTCCTCCCTATGAGTTAGCTTTTGGGGCGTGAGTTAGGCCCAAACCTAATTTTAACAAAGATCACTTTAGAAAAGTGACTTCTTGTTTTCTTGTAGAGTGCCTAGATTTGTAATTTTTAAAAGGTTAATGAATTTGCTAGCATATTGTTGAATGTTAGGTTATAAACCATGGGGTGACACCTTTGCTCTTGGAGGACTTCAAGAGAGAGGTTATTGAATTGTTCAAACTTCCAATGGAAGAAAAGAAGAAGCTATGGAAACAGGAAGACAGCTTGGAAGGTTTCGGGCATGCATTCGTTGTGTCTGAAGATCAGAAACTTGATTGGAGTGACAGGTTTGGCATACTGACTCTTCCTCCTCATATCCGCAAAGTGGATTTGTTTCAGAAGTTGCCCTCGAAGCTCAGGTGCCTGTCTCCTTACTAGATTATTACTCTATTTGAGTGTTCATTACTTAAACAATCATTGATAAAGGAGAACACAATTACTTTTGGTTTTTTATAAATTAGGTAACCAGATTGTTAACTATACTTTTTGTTAAAAACTTGTATTTCTAACTTGTGCCTTGATCTTCGCACTCTAAGATTTTAATATGTTTATGTGTTTGAAATGCAGGGATATCATGGAAGCATACT</genome_strand>
        <mrna_strand>TGATTAAAAACCCAAACCCGAATTTGATAGAAATTTTCAAGTTTGTAACAAGAGCCAATGGATTCAACCCCGGAAAAATTGAACTTTGGAAAATCTCTGTTAGTTCCAAGTGTTCAAGAGCTTGCCAAACAGCACCTAACCATTATCCCAGACAGGTATCTCCAGCCAGAGCAAGAAACTCCGGTCATTTCCGCCGGAGCGGAGGTTCCAGTTATCGATGTTCAAAAGTTGATTTCAGGTGATTCCATGGATTCTGAGCTGCAAAAGCTTCACTCTGCTTGCCAACAATGGGGTTTCCTACAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATAAACCATGGGGTGACACCTTTGCTCTTGGAGGACTTCAAGAGAGAGGTTATTGAATTGTTCAAACTTCCAATGGAAGAAAAGAAGAAGCTATGGAAACAGGAAGACAGCTTGGAAGGTTTCGGGCATGCATTCGTTGTGTCTGAAGAGCAGAAACTTGATTGGAGTGACAGGTTTGGCATACTGACTCTTCCTCCTCATATCCGCAAAGTGGATTTGTTTCAGAAGTTGCCCTCGAAGCTCAG................................................................................................................................................................................................................GGATATCATGGAAGCATACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E208253" ref_strand="+" ref_description="SGN-E208253 [cLEC-37-N11]">
      <seq>ccggaaaaattgaactttggaaaatctctgttagttccaagcgtgcaagagcttgccaaacagcacctaaccattattccagacaggtatctgcagccagagcaagaaactccggtcatttccgccggagcggaggttccagttatggatgttcaaaagttgatttcaggtgattccatggattctgagctgcaaaagcttcactctgcttgccaacaatggggtttactacaggttataaaccatggggtgacacctttgctcttggaggacttcaagagagaggatattgagttgttcaaacttccagtggaagaaaagaagaagctgtggaaacaggaagacagcttgtaaggcttcgggcatgcattcgttgtgtctgaagagcagaaacttgattggagtgacagggatggcatactgactc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0212P19.2" temp_strand="-" temp_description="C02HBa0212P19.2  AC215423.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0212P19 sequenced_by:kribb upload_account_name:korea">
        <position start="20090" stop="18451"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19790" g_stop="19557" g_length="234"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="234" r_length="234" r_score="0.970"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19556" i_stop="18944" i_length="613">
            <donor d_prob="0.965" d_score="0.98"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18943" g_stop="18751" g_length="193"/>
          <reference_exon_boundary r_type="cDNA" r_start="235" r_stop="427" r_length="193" r_score="0.953"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0212P19.2" gen_strand="-" ref_id="SGN-E208253" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>427</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0212P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E208253" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19790" e_stop="19557"/>
          <exon e_start="18943" e_stop="18751"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGGAAAAATTGAACTTTGGAAAATCTCTGTTAGTTCCAAGTGTTCAAGAGCTTGCCAAACAGCACCTAACCATTATCCCAGACAGGTATCTCCGGCCAGAGCAAGAAACTCCGGTCATTTCCGCCGGAGCGGAGGTTCCAGTTATCGATGTTCAAAAGTTGATTTCAGGTGATTCCATGGATTCTGAGCTGCAAAAGCTTCACTCTGCTTGCCAACAATGGGGTTTCCTACAGGTTTCATGTTCTTCATGATTTTGTTTTATTGTGCGAATAAATTTTATTTGCGAAGCTTCAAAAACACTCCTAAAGTTTATGTTTTTCTCTCACTAATGTGAATTTCCTACTTTTAACTATTAACAAATGTTTATCGAAATACAATTCATGTATCAAATGTTCATTTTTACTACGATGATATTTCAAGTAGGAAAAGGATACAACTGTAGTAGAAATAAGCAACTTTTATAAATCTTGGCCAAACATATTCTATTCTTAACGTTATTTTCATCTATTTAGTTCAAATTAAACATATAAGACATGTAAAAACTTATTTTCAGCTTTCCTTCCCCCATTAAAAGTGTTCAGATTTTAAATAAACTGTAATATCAGAATAATAGATTCTAAAATGCATAATCCTTTGTTAAGGGAAAAATTCCCACATCGGTTGGGCTCGTTATAAGGCGTGACCAATCCTCCTCCCTATGAGTTAGCTTTTGGGGCGTGAGTTAGGCCCAAACCTAATTTTAACAAAGATCACTTTAGAAAAGTGACTTCTTGTTTTCTTGTAGAGTGCCTAGATTTGTAATTTTTAAAAGGTTAATGAATTTGCTAGCATATTGTTGAATGTTAGGTTATAAACCATGGGGTGACACCTTTGCTCTTGGAGGACTTCAAGAGAGAGGTTATTGAATTGTTCAAACTTCCAATGGAAGAAAAGAAGAAGCTATGGAAACAGGAAGACAGCTTGGAAGGTTTCGGGCATGCATTCGTTGTGTCTGAAGATCAGAAACTTGATTGGAGTGACAGGTTTGGCATACTGACTC</genome_strand>
        <mrna_strand>CCGGAAAAATTGAACTTTGGAAAATCTCTGTTAGTTCCAAGCGTGCAAGAGCTTGCCAAACAGCACCTAACCATTATTCCAGACAGGTATCTGCAGCCAGAGCAAGAAACTCCGGTCATTTCCGCCGGAGCGGAGGTTCCAGTTATGGATGTTCAAAAGTTGATTTCAGGTGATTCCATGGATTCTGAGCTGCAAAAGCTTCACTCTGCTTGCCAACAATGGGGTTTACTACAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATAAACCATGGGGTGACACCTTTGCTCTTGGAGGACTTCAAGAGAGAGGATATTGAGTTGTTCAAACTTCCAGTGGAAGAAAAGAAGAAGCTGTGGAAACAGGAAGACAGCTTGTAAGGCTTCGGGCATGCATTCGTTGTGTCTGAAGAGCAGAAACTTGATTGGAGTGACAGGGATGGCATACTGACTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E395442" ref_strand="+" ref_description="SGN-E395442 [TUS-16-K20](-)">
      <seq>gccagacagggcaattggcttaagccctcattctgatgcagatgccctcaccatcctcttccagctcaatgaaactgaaggtctccaagtccgaaaagacgatatttgggtgcctataacgcccctcccaaatgctttgattgtcaatattggcgatatgatggagatagtgagcaatggtgtctataggagcattgagcatagagcaattgtaaactcatatgaagaacgtctctctgttgcaacattctacaacatcaaccttgagtccgagttaggacctgcacacagccttattggaccacataatcctcccattttccgaagagttcctgtgcaaaaatatttacaggacttttttgcacgaaaacttgatggaaaatcgtatcttgattccatgaaggtcgacgcgagggatgatgaatcataggtagaatctgatatatgtctgtcttgttgttgtaatttggagttcccctgttttctatttgttagctgtattgacgtgaagcaaatattaatatgtggattgctttagacactatatttttgggttgagaggaatttccatgaatttattttagaggaaaatacacgactatcccctaaaagttgcagtgaagtcgaatcgtactaaagataaaattatttttaaaaaatagtaaagttaattttttttctcgataaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0212P19.2" temp_strand="-" temp_description="C02HBa0212P19.2  AC215423.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0212P19 sequenced_by:kribb upload_account_name:korea">
        <position start="23714" stop="22213"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23414" g_stop="23249" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="166" r_length="166" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23248" i_stop="23042" i_length="207">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="23041" g_stop="22511" g_length="531"/>
          <reference_exon_boundary r_type="cDNA" r_start="167" r_stop="697" r_length="531" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0212P19.2" gen_strand="-" ref_id="SGN-E395442" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>697</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0212P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E395442" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23414" e_stop="23249"/>
          <exon e_start="23041" e_stop="22511"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCAGACAGGGCAATTGGCTTAAGCCCTCATTCTGATGCAGATGCCCTCACCATCCTCTTCCAGCTCAATGAAACTGAAGGTCTCCAAGTCCGAAAAGACGATATTTGGGTGCCTATAACGCCCCTCCCAAATGCTTTGATTGTCAATATTGGCGATATGATGGAGGTAAATAACAAACCTTTTACTGAGTAATTTATTTCTCAAAGGGTAGGCGTTAGCCACATATGATAATTGTAGTTTTTGTGTTGCAAGTTATCGTTTTAGTTTGGTTTTGATTCACAGTATCATGCATCATGGTTCACGTGTTTAACACTTCTGAATTTTCATGAAAGTACTTAATTGACGAAAAATGTGTTTATTTGACTTTGGCAGATAGTGAGCAATGGTGTCTATAGGAGCATTGAGCATAGAGCAATTGTAAACTCATATGAAGAACGTCTCTCTGTTGCAACATTCTACAACATCAACCTTGAGTCCGAGTTAGGACCTGCACACAGCCTTATTGGACCACATAATCCTCCCATTTTCCGAAGAGTTCCTGTGCAAAAATATTTACAGGACTTTTTTGCACGAAAACTTGATGGAAAATCGTATCTTGATTCCATGAAGGTCGACGCGAGGGATGATGAATCATAGGTAGAATCTGATATATGTCTGTCTTGTTGTTGTAATTTGGAGTTCCCCTGTTTTCTATTTGTTAGCTGTATTGACGTGAAGCAAATATTAATATGTGGATTGCTTTAGACACTATATTTTTGGGTTGAGAGGAATTTCCATGAATTTATTTTAGAGGAAAATACACGACTATCCCCTAAAAGTTGCAGTGAAGTCGGATCGTACTAGAGATAAAATTATTTTTAAAAAATAGTAAAGTTAATTTTTTTTCTCGATAAAAACAGAATG</genome_strand>
        <mrna_strand>GCCAGACAGGGCAATTGGCTTAAGCCCTCATTCTGATGCAGATGCCCTCACCATCCTCTTCCAGCTCAATGAAACTGAAGGTCTCCAAGTCCGAAAAGACGATATTTGGGTGCCTATAACGCCCCTCCCAAATGCTTTGATTGTCAATATTGGCGATATGATGGAG...............................................................................................................................................................................................................ATAGTGAGCAATGGTGTCTATAGGAGCATTGAGCATAGAGCAATTGTAAACTCATATGAAGAACGTCTCTCTGTTGCAACATTCTACAACATCAACCTTGAGTCCGAGTTAGGACCTGCACACAGCCTTATTGGACCACATAATCCTCCCATTTTCCGAAGAGTTCCTGTGCAAAAATATTTACAGGACTTTTTTGCACGAAAACTTGATGGAAAATCGTATCTTGATTCCATGAAGGTCGACGCGAGGGATGATGAATCATAGGTAGAATCTGATATATGTCTGTCTTGTTGTTGTAATTTGGAGTTCCCCTGTTTTCTATTTGTTAGCTGTATTGACGTGAAGCAAATATTAATATGTGGATTGCTTTAGACACTATATTTTTGGGTTGAGAGGAATTTCCATGAATTTATTTTAGAGGAAAATACACGACTATCCCCTAAAAGTTGCAGTGAAGTCGAATCGTACTAAAGATAAAATTATTTTTAAAAAATAGTAAAGTTAATTTTTTTTCTCGATAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E575245" ref_strand="-" ref_description="SGN-E575245 [34840]">
      <seq>gtatgtcaattcgccaaaggcctttaaaggatggatgaaaaagaatatgcgagatctattcaagtgatggtatgcagtcaatgagaatgaattattatcccgccttgtcctgagccagacagggcaattggcttaagccctcattctgatgcggatgccctcaccatcctcttccagctcaatgaaactgaaggtctccaagtcagaaaagacgatatttgggtgcctataaaggccctcccaaatgctttgattgtcaatattggcgatatgatggagatagtgagcaatggtgtctatagaagcattgagcatagagcaactgtaaactcaaatgaagaacgactctctgttgcgacattctataacatcaaccttgagtccgagttaggacctgcacacagcctcattggaccacataatcctcccattttccgaagagtttctgtgcacaaatatttacaggacttttttgcacgaaaacttgatggaaaatcgtaccttgatttcatgaaggtcgaggcaagggatgatgaatcataggtagcatttgatataagttactcttgctgttgtaatttagagttccctgtttgattactataaataagaagaatagagtactcttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0212P19.2" temp_strand="-" temp_description="C02HBa0212P19.2  AC215423.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0212P19 sequenced_by:kribb upload_account_name:korea">
        <position start="23821" stop="17275"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23521" g_stop="23249" g_length="273"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="279" r_length="279" r_score="0.930"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23248" i_stop="23042" i_length="207">
            <donor d_prob="0.976" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="23041" g_stop="22711" g_length="331"/>
          <reference_exon_boundary r_type="cDNA" r_start="280" r_stop="609" r_length="330" r_score="0.903"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="22710" i_stop="22624" i_length="87">
            <donor d_prob="0.000" d_score="0.68"/>
            <acceptor a_prob="0.875" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="22623" g_stop="22604" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="610" r_stop="629" r_length="20" r_score="0.650"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0212P19.2" gen_strand="-" ref_id="SGN-E575245" ref_strand="-">
        <total_alignment_score>0.916</total_alignment_score>
        <cumulative_length_of_scored_exons>624</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0212P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E575245" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="23521" e_stop="23249"/>
          <exon e_start="23041" e_stop="22711"/>
          <exon e_start="22623" e_stop="22604"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTATGTCAATTGGCC-AAGGC-TTT-AAGGATGGATGAAAAAGAA-ATGCGAGATCTATTC-AGTGATGGTATGCAGTCAATAAGGATGAATTATTATCCC-CCTTGTCCTGAGCCAGACAGGGCAATTGGCTTAAGCCCTCATTCTGATGCAGATGCCCTCACCATCCTCTTCCAGCTCAATGAAACTGAAGGTCTCCAAGTCCGAAAAGACGATATTTGGGTGCCTATAACGCCCCTCCCAAATGCTTTGATTGTCAATATTGGCGATATGATGGAGGTAAATAACAAACCTTTTACTGAGTAATTTATTTCTCAAAGGGTAGGCGTTAGCCACATATGATAATTGTAGTTTTTGTGTTGCAAGTTATCGTTTTAGTTTGGTTTTGATTCACAGTATCATGCATCATGGTTCACGTGTTTAACACTTCTGAATTTTCATGAAAGTACTTAATTGACGAAAAATGTGTTTATTTGACTTTGGCAGATAGTGAGCAATGGTGTCTATAGGAGCATTGAGCATAGAGCAATTGTAAACTCATATGAAGAACGTCTCTCTGTTGCAACATTCTACAACATCAACCTTGAGTCCGAGTTAGGACCTGCACACAGCCTTATTGGACCACATAATCCTCCCATTTTCCGAAGAGTTCCTGTGCAAAAATATTTACAGGACTTTTTTGCACGAAAACTTGATGGAAAATCGTATCTTGATTCCATGAAGGTCGACGCGAGGGATGATGAATCATAGGTAGAATCTGATATATGTCTGTCTTGTTGTTGTAATTTGGAGTTCCCCTGTTTTCTATTTGTTAGCTGTATTGACGTGAAGCAAATATTAATATGTGGATTGCTTTAGACACTATATTTTTGGGTTGAGAGGAATTTCCATGAATTTATTTTAGAGGAAAATACACGACTATCC</genome_strand>
        <mrna_strand>GTATGTCAATTCGCCAAAGGCCTTTAAAGGATGGATGAAAAAGAATATGCGAGATCTATTCAAGTGATGGTATGCAGTCAATGAGAATGAATTATTATCCCGCCTTGTCCTGAGCCAGACAGGGCAATTGGCTTAAGCCCTCATTCTGATGCGGATGCCCTCACCATCCTCTTCCAGCTCAATGAAACTGAAGGTCTCCAAGTCAGAAAAGACGATATTTGGGTGCCTATAAAGGCCCTCCCAAATGCTTTGATTGTCAATATTGGCGATATGATGGAG...............................................................................................................................................................................................................ATAGTGAGCAATGGTGTCTATAGAAGCATTGAGCATAGAGCAACTGTAAACTCAAATGAAGAACGACTCTCTGTTGCGACATTCTATAACATCAACCTTGAGTCCGAGTTAGGACCTGCACACAGCCTCATTGGACCACATAATCCTCCCATTTTCCGAAGAGTTTCTGTGCACAAATATTTACAGGACTTTTTTGCACGAAAACTTGATGGAAAATCGTACCTTGATTTCATGAAGGTCGAGGCAAGGGATGATGAATCATAGGTAGCATTTGATATAAGTTACTCTTGCTGTTGTAATTTAGAGTT-CCCTGTTTGATTACTATAAATA.......................................................................................AGAAGAATAGAGTACTCTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E308962" ref_strand="+" ref_description="SGN-E308962 [cLEY-23-E10]">
      <seq>agtgatggtatgcagtcaataaggatgaattattatcccccttgtcctgagccagacagggcaattggcttaagccctcattctgatgcagatgccctcaccatcctcttccagctcaatgaaactgaaggtctccaagtccgaaaagacgatatttgggtgcctataacgcccctcccaaatgctttgattgtcaatattggcgatatgatggagatagtgagcaatggtgtctataggagcattgagcatagagcaattgtaaactcatatgaagaacgtctctctgttgcaacattctacaacatcaaccttgagtccgagttaggacctgcacacagccttattggaccacataatcctcccattttccgaagagttcctgtgcaaaaatatttacaggacttttttgcacgaaaacttgatggaaaatcgtatcttgattccatgaaggtcgacgcgagggatgatgaatcataggtagaatctgatatatgtctgtcttgttgttgtaatttggagttcccctgttttctatttgttagctgtattgacgtgaagcaaatattaatatgtggattgctttagacactatatttttgggttgagaggaatttccatgaatttattttagaggaaaaaaaaaaatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0212P19.2" temp_strand="-" temp_description="C02HBa0212P19.2  AC215423.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0212P19 sequenced_by:kribb upload_account_name:korea">
        <position start="23764" stop="22308"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23464" g_stop="23249" g_length="216"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="216" r_length="216" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23248" i_stop="23042" i_length="207">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="23041" g_stop="22608" g_length="434"/>
          <reference_exon_boundary r_type="cDNA" r_start="217" r_stop="650" r_length="434" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0212P19.2" gen_strand="-" ref_id="SGN-E308962" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>650</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0212P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E308962" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23464" e_stop="23249"/>
          <exon e_start="23041" e_stop="22608"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTGATGGTATGCAGTCAATAAGGATGAATTATTATCCCCCTTGTCCTGAGCCAGACAGGGCAATTGGCTTAAGCCCTCATTCTGATGCAGATGCCCTCACCATCCTCTTCCAGCTCAATGAAACTGAAGGTCTCCAAGTCCGAAAAGACGATATTTGGGTGCCTATAACGCCCCTCCCAAATGCTTTGATTGTCAATATTGGCGATATGATGGAGGTAAATAACAAACCTTTTACTGAGTAATTTATTTCTCAAAGGGTAGGCGTTAGCCACATATGATAATTGTAGTTTTTGTGTTGCAAGTTATCGTTTTAGTTTGGTTTTGATTCACAGTATCATGCATCATGGTTCACGTGTTTAACACTTCTGAATTTTCATGAAAGTACTTAATTGACGAAAAATGTGTTTATTTGACTTTGGCAGATAGTGAGCAATGGTGTCTATAGGAGCATTGAGCATAGAGCAATTGTAAACTCATATGAAGAACGTCTCTCTGTTGCAACATTCTACAACATCAACCTTGAGTCCGAGTTAGGACCTGCACACAGCCTTATTGGACCACATAATCCTCCCATTTTCCGAAGAGTTCCTGTGCAAAAATATTTACAGGACTTTTTTGCACGAAAACTTGATGGAAAATCGTATCTTGATTCCATGAAGGTCGACGCGAGGGATGATGAATCATAGGTAGAATCTGATATATGTCTGTCTTGTTGTTGTAATTTGGAGTTCCCCTGTTTTCTATTTGTTAGCTGTATTGACGTGAAGCAAATATTAATATGTGGATTGCTTTAGACACTATATTTTTGGGTTGAGAGGAATTTCCATGAATTTATTTTAGAGGAAAATACACGACT</genome_strand>
        <mrna_strand>AGTGATGGTATGCAGTCAATAAGGATGAATTATTATCCCCCTTGTCCTGAGCCAGACAGGGCAATTGGCTTAAGCCCTCATTCTGATGCAGATGCCCTCACCATCCTCTTCCAGCTCAATGAAACTGAAGGTCTCCAAGTCCGAAAAGACGATATTTGGGTGCCTATAACGCCCCTCCCAAATGCTTTGATTGTCAATATTGGCGATATGATGGAG...............................................................................................................................................................................................................ATAGTGAGCAATGGTGTCTATAGGAGCATTGAGCATAGAGCAATTGTAAACTCATATGAAGAACGTCTCTCTGTTGCAACATTCTACAACATCAACCTTGAGTCCGAGTTAGGACCTGCACACAGCCTTATTGGACCACATAATCCTCCCATTTTCCGAAGAGTTCCTGTGCAAAAATATTTACAGGACTTTTTTGCACGAAAACTTGATGGAAAATCGTATCTTGATTCCATGAAGGTCGACGCGAGGGATGATGAATCATAGGTAGAATCTGATATATGTCTGTCTTGTTGTTGTAATTTGGAGTTCCCCTGTTTTCTATTTGTTAGCTGTATTGACGTGAAGCAAATATTAATATGTGGATTGCTTTAGACACTATATTTTTGGGTTGAGAGGAATTTCCATGAATTTATTTTAGAGGAAAAAAAAAAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E296135" ref_strand="+" ref_description="SGN-E296135 [cLET-24-N1]">
      <seq>aagcttgattggagtgacatgtttggcataataaatcttcctcctcatatgcgcaaagtggacttgtttcagaagttgccctcgaagctcagagacatcatggaagcatattccaaagaaatcaagaacctaacaatgatcatcgtatgtcaattggccaaggctttaaggatggatgaaaaagaaatgcgagatctattcagtgatggtatgcagtcaataaggatgaattattatcccccttgtcctgagccagacagggcaattggcttaagccctcattctgatgcagatgccctcaccatcctcttccagctcaatgaaactgaaggtctccaagtccgaaaagacgatatttgggtgcctataacgcccctcccaaatgctttgattgtcaatattggcgatatgatggagatagtgagcaatggtgtctataggagcattgagcatagagcaattgtaaactcatatgaagaacgtctctctgttgcaacattctacaacatcaaccttgagtccgagttaggacctgcacacagccttattggaccacataatcctcccattttccgaagagttcctgtgcaaaaatatttacaggacttttttgcacgaaaacttgatggaaaatcgtatcttgattccatgaaggtcgacgcgagggatgatgaatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0212P19.2" temp_strand="-" temp_description="C02HBa0212P19.2  AC215423.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0212P19 sequenced_by:kribb upload_account_name:korea">
        <position start="24225" stop="22482"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23925" g_stop="23834" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="92" r_length="92" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23833" i_stop="23574" i_length="260">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="23573" g_stop="23249" g_length="325"/>
          <reference_exon_boundary r_type="cDNA" r_start="93" r_stop="417" r_length="325" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="23248" i_stop="23042" i_length="207">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="23041" g_stop="22782" g_length="260"/>
          <reference_exon_boundary r_type="cDNA" r_start="418" r_stop="677" r_length="260" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0212P19.2" gen_strand="-" ref_id="SGN-E296135" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>677</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0212P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E296135" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23925" e_stop="23834"/>
          <exon e_start="23573" e_stop="23249"/>
          <exon e_start="23041" e_stop="22782"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGCTTGATTGGAGTGACATGTTTGGCATAATAAATCTTCCTCCTCATATCCGCAAAGTGGACTTGTTTCAGAAGTTGCCCTCGAAGCTCAGGTGGCCATCTCCTTACTCTCTCTCAGCACATGCTTACTCGACGCCCTTACTTGTCTTTCTTTTGTATAAGAAAAGTCAAGAAATCGACTTTGTTCAGTTATCTCTACTAGTTTATGAACTATTTAAGCAGTAAACTACTCTATCCAACGGTATCAACCAATTCTTGAAATTTAAATTCGTCCCACAGACCATTTTGTCTAATGTGTGCCTTGATCTTCGCTCTCCTCATCTCTTAATATGTTTGTGTGTTTGAAATGCAGAGACATCATGGAAGCATATTCCAAAGAAATCAAGAACCTAACAATGATCATCGTATGTCAATTGGCCAAGGCTTTAAGGATGGATGAAAAAGAAATGCGAGATCTATTCAGTGATGGTATGCAGTCAATAAGGATGAATTATTATCCCCCTTGTCCTGAGCCAGACAGGGCAATTGGCTTAAGCCCTCATTCTGATGCAGATGCCCTCACCATCCTCTTCCAGCTCAATGAAACTGAAGGTCTCCAAGTCCGAAAAGACGATATTTGGGTGCCTATAACGCCCCTCCCAAATGCTTTGATTGTCAATATTGGCGATATGATGGAGGTAAATAACAAACCTTTTACTGAGTAATTTATTTCTCAAAGGGTAGGCGTTAGCCACATATGATAATTGTAGTTTTTGTGTTGCAAGTTATCGTTTTAGTTTGGTTTTGATTCACAGTATCATGCATCATGGTTCACGTGTTTAACACTTCTGAATTTTCATGAAAGTACTTAATTGACGAAAAATGTGTTTATTTGACTTTGGCAGATAGTGAGCAATGGTGTCTATAGGAGCATTGAGCATAGAGCAATTGTAAACTCATATGAAGAACGTCTCTCTGTTGCAACATTCTACAACATCAACCTTGAGTCCGAGTTAGGACCTGCACACAGCCTTATTGGACCACATAATCCTCCCATTTTCCGAAGAGTTCCTGTGCAAAAATATTTACAGGACTTTTTTGCACGAAAACTTGATGGAAAATCGTATCTTGATTCCATGAAGGTCGACGCGAGGGATGATGAATC</genome_strand>
        <mrna_strand>AAGCTTGATTGGAGTGACATGTTTGGCATAATAAATCTTCCTCCTCATATGCGCAAAGTGGACTTGTTTCAGAAGTTGCCCTCGAAGCTCAG....................................................................................................................................................................................................................................................................AGACATCATGGAAGCATATTCCAAAGAAATCAAGAACCTAACAATGATCATCGTATGTCAATTGGCCAAGGCTTTAAGGATGGATGAAAAAGAAATGCGAGATCTATTCAGTGATGGTATGCAGTCAATAAGGATGAATTATTATCCCCCTTGTCCTGAGCCAGACAGGGCAATTGGCTTAAGCCCTCATTCTGATGCAGATGCCCTCACCATCCTCTTCCAGCTCAATGAAACTGAAGGTCTCCAAGTCCGAAAAGACGATATTTGGGTGCCTATAACGCCCCTCCCAAATGCTTTGATTGTCAATATTGGCGATATGATGGAG...............................................................................................................................................................................................................ATAGTGAGCAATGGTGTCTATAGGAGCATTGAGCATAGAGCAATTGTAAACTCATATGAAGAACGTCTCTCTGTTGCAACATTCTACAACATCAACCTTGAGTCCGAGTTAGGACCTGCACACAGCCTTATTGGACCACATAATCCTCCCATTTTCCGAAGAGTTCCTGTGCAAAAATATTTACAGGACTTTTTTGCACGAAAACTTGATGGAAAATCGTATCTTGATTCCATGAAGGTCGACGCGAGGGATGATGAATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E290167" ref_strand="+" ref_description="SGN-E290167 [cLET-5-E15]">
      <seq>aagcttgattggagtgacatgtttggcataataaatcttcctcctcatatccgcaaagtggacttgtttcagaagttgccctcgaagctcagagacatcatggaagcatattccaaagaaatcaagaacctaacaatgatcatcgtatgtcaattggccaaggctttaaggatggatgaaaaagaaatgcgagatctattcagtgatggtatgcagtcaataaggatgaattattatcccccttgtcctgagccagacagggcaattggcttaagccctcattctgatgcagatgccctcaccatcctcttccagctcaatgaaactgaaggtctccaagtccgaaaagacgatatttgggtgcctataacgcccctcccaaatgctttgattgtcaatattggcgatatgatggagatagtgagcaatggtgtctataggagcattgagcatagagcaattgtaaactcatatgaagaacgtctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0212P19.2" temp_strand="-" temp_description="C02HBa0212P19.2  AC215423.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0212P19 sequenced_by:kribb upload_account_name:korea">
        <position start="24225" stop="22673"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23925" g_stop="23834" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="92" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23833" i_stop="23574" i_length="260">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="23573" g_stop="23249" g_length="325"/>
          <reference_exon_boundary r_type="cDNA" r_start="93" r_stop="417" r_length="325" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="23248" i_stop="23042" i_length="207">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="23041" g_stop="22973" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="418" r_stop="486" r_length="69" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0212P19.2" gen_strand="-" ref_id="SGN-E290167" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>486</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0212P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E290167" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23925" e_stop="23834"/>
          <exon e_start="23573" e_stop="23249"/>
          <exon e_start="23041" e_stop="22973"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGCTTGATTGGAGTGACATGTTTGGCATAATAAATCTTCCTCCTCATATCCGCAAAGTGGACTTGTTTCAGAAGTTGCCCTCGAAGCTCAGGTGGCCATCTCCTTACTCTCTCTCAGCACATGCTTACTCGACGCCCTTACTTGTCTTTCTTTTGTATAAGAAAAGTCAAGAAATCGACTTTGTTCAGTTATCTCTACTAGTTTATGAACTATTTAAGCAGTAAACTACTCTATCCAACGGTATCAACCAATTCTTGAAATTTAAATTCGTCCCACAGACCATTTTGTCTAATGTGTGCCTTGATCTTCGCTCTCCTCATCTCTTAATATGTTTGTGTGTTTGAAATGCAGAGACATCATGGAAGCATATTCCAAAGAAATCAAGAACCTAACAATGATCATCGTATGTCAATTGGCCAAGGCTTTAAGGATGGATGAAAAAGAAATGCGAGATCTATTCAGTGATGGTATGCAGTCAATAAGGATGAATTATTATCCCCCTTGTCCTGAGCCAGACAGGGCAATTGGCTTAAGCCCTCATTCTGATGCAGATGCCCTCACCATCCTCTTCCAGCTCAATGAAACTGAAGGTCTCCAAGTCCGAAAAGACGATATTTGGGTGCCTATAACGCCCCTCCCAAATGCTTTGATTGTCAATATTGGCGATATGATGGAGGTAAATAACAAACCTTTTACTGAGTAATTTATTTCTCAAAGGGTAGGCGTTAGCCACATATGATAATTGTAGTTTTTGTGTTGCAAGTTATCGTTTTAGTTTGGTTTTGATTCACAGTATCATGCATCATGGTTCACGTGTTTAACACTTCTGAATTTTCATGAAAGTACTTAATTGACGAAAAATGTGTTTATTTGACTTTGGCAGATAGTGAGCAATGGTGTCTATAGGAGCATTGAGCATAGAGCAATTGTAAACTCATATGAAGAACGTCTC</genome_strand>
        <mrna_strand>AAGCTTGATTGGAGTGACATGTTTGGCATAATAAATCTTCCTCCTCATATCCGCAAAGTGGACTTGTTTCAGAAGTTGCCCTCGAAGCTCAG....................................................................................................................................................................................................................................................................AGACATCATGGAAGCATATTCCAAAGAAATCAAGAACCTAACAATGATCATCGTATGTCAATTGGCCAAGGCTTTAAGGATGGATGAAAAAGAAATGCGAGATCTATTCAGTGATGGTATGCAGTCAATAAGGATGAATTATTATCCCCCTTGTCCTGAGCCAGACAGGGCAATTGGCTTAAGCCCTCATTCTGATGCAGATGCCCTCACCATCCTCTTCCAGCTCAATGAAACTGAAGGTCTCCAAGTCCGAAAAGACGATATTTGGGTGCCTATAACGCCCCTCCCAAATGCTTTGATTGTCAATATTGGCGATATGATGGAG...............................................................................................................................................................................................................ATAGTGAGCAATGGTGTCTATAGGAGCATTGAGCATAGAGCAATTGTAAACTCATATGAAGAACGTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E434307" ref_strand="+" ref_description="SGN-E434307 [STM-59-B14]">
      <seq>gttagttccaagtgttcaagagcttgccaaacagcacctaaccaattttccggccaggtatgtccgctcagaacaagaatctccagtcatattagccggagcgtcggttccagttatcgatcttcaaaagttgttttcaggggattccatggattctgagctacaaaagcttcactctgcttgccaacaatgggtttcctccaggttataaaccatggagtgacaccttcattgttggaggagttcaagagagaggttgtagaattgtttggacttccaatggaagaaaagaagaaactatggcaacaggaagacagttttgaaggttttgggaatgcattcgttgtatcggaggagcagaagcttgattggtgtgacatgtttggcataataactcttcctcctcgtatccgcaaagtggacttgtttcagaagttgccctcaaagatcaggggcatcatggaagcatactccaaagaaatcaagagcctagctacgatcatcgtatgtcaattggccaaggctttaaggatggatngaaaagaaatgcgagatatattcaatgatggtatgcagtcaatgaggatgaattattatccaccttgccctgagccagacagggccattggctttagccctcattcttgatgctgatgccctcaccatccttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0212P19.2" temp_strand="-" temp_description="C02HBa0212P19.2  AC215423.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0212P19 sequenced_by:kribb upload_account_name:korea">
        <position start="28832" stop="13209"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24405" g_stop="24201" g_length="205"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="204" r_length="204" r_score="0.902"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="24200" i_stop="24082" i_length="119">
            <donor d_prob="0.977" d_score="0.94"/>
            <acceptor a_prob="0.993" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24081" g_stop="23834" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="205" r_stop="452" r_length="248" r_score="0.899"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="23833" i_stop="23574" i_length="260">
            <donor d_prob="0.000" d_score="0.94"/>
            <acceptor a_prob="0.999" a_score="0.86"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="23573" g_stop="23356" g_length="218"/>
          <reference_exon_boundary r_type="cDNA" r_start="453" r_stop="671" r_length="219" r_score="0.908"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0212P19.2" gen_strand="-" ref_id="SGN-E434307" ref_strand="+">
        <total_alignment_score>0.903</total_alignment_score>
        <cumulative_length_of_scored_exons>671</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0212P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E434307" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24405" e_stop="24201"/>
          <exon e_start="24081" e_stop="23834"/>
          <exon e_start="23573" e_stop="23356"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTAGTACCAAGTGTTCAAGAGCTTGCCAAACAGCACCTAACCAATATTCCGGACAGGTATGTCCGCCCACAACAAGAATCTCTGGTCGTATCTTCCGGAGCATCAGTTCCAGTTATCGATCTTCAAAAGTTGATTTCAGGGAATACCATAGATTCTGAGCTACAAAAGCTTCACTCTGCTTGCCAAGAATGGGGTTTCCTACAGGTTTCAATTTCTTCGGAATTTTGTTCAATTATTTCGTTGTGTTTGTTACGAATGCATTTTATTTGAATTGAAAATGACTTATTGGTTGAGAAATTAACTCACATATTGTTGAATGTTAGGTTGTAAACCATGGAGTGACACCTTCGTTACTGGAGGACTTCAAGAGAGAGGTTATTCAATTGTTCAAACTTCCAATGGAAGAAAAGAAGAAACTGTGGCAACAGAAAGACAGCTTTGAAGGTTTCGGGCATATGTTTGTTGTATCGGAGGAGCAGAAGCTTGATTGGAGTGACATGTTTGGCATAATAAATCTTCCTCCTCATATCCGCAAAGTGGACTTGTTTCAGAAGTTGCCCTCGAAGCTCAGGTGGCCATCTCCTTACTCTCTCTCAGCACATGCTTACTCGACGCCCTTACTTGTCTTTCTTTTGTATAAGAAAAGTCAAGAAATCGACTTTGTTCAGTTATCTCTACTAGTTTATGAACTATTTAAGCAGTAAACTACTCTATCCAACGGTATCAACCAATTCTTGAAATTTAAATTCGTCCCACAGACCATTTTGTCTAATGTGTGCCTTGATCTTCGCTCTCCTCATCTCTTAATATGTTTGTGTGTTTGAAATGCAGAGACATCATGGAAGCATATTCCAAAGAAATCAAGAACCTAACAATGATCATCGTATGTCAATTGGCCAAGGCTTTAAGGATGGATGAAAAAGAAATGCGAGATCTATTCAGTGATGGTATGCAGTCAATAAGGATGAATTATTATCCCCCTTGTCCTGAGCCAGACAGGGCAATTGGCTTAAGCCCTCATTC-TGATGCAGATGCCCTCACCATCCTCT</genome_strand>
        <mrna_strand>GTTAGTTCCAAGTGTTCAAGAGCTTGCCAAACAGCACCTAACCAATTTTCCGGCCAGGTATGTCCGCTCAGAACAAGAATCTCCAGTCATATTAGCCGGAGCGTCGGTTCCAGTTATCGATCTTCAAAAGTTGTTTTCAGGGGATTCCATGGATTCTGAGCTACAAAAGCTTCACTCTGCTTGCCAACAAT-GGGTTTCCTCCAG.......................................................................................................................GTTATAAACCATGGAGTGACACCTTCATTGTTGGAGGAGTTCAAGAGAGAGGTTGTAGAATTGTTTGGACTTCCAATGGAAGAAAAGAAGAAACTATGGCAACAGGAAGACAGTTTTGAAGGTTTTGGGAATGCATTCGTTGTATCGGAGGAGCAGAAGCTTGATTGGTGTGACATGTTTGGCATAATAACTCTTCCTCCTCGTATCCGCAAAGTGGACTTGTTTCAGAAGTTGCCCTCAAAGATCAG....................................................................................................................................................................................................................................................................GGGCATCATGGAAGCATACTCCAAAGAAATCAAGAGCCTAGCTACGATCATCGTATGTCAATTGGCCAAGGCTTTAAGGATGGATNGAAAAGAAATGCGAGATATATTCAATGATGGTATGCAGTCAATGAGGATGAATTATTATCCACCTTGCCCTGAGCCAGACAGGGCCATTGGCTTTAGCCCTCATTCTTGATGCTGATGCCCTCACCATCCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E267646" ref_strand="+" ref_description="SGN-E267646 [cLEI-8-N14]">
      <seq>ttcaagtttgcaagaagagcaaatggagtcaacgccggaaaaattgaactttggaaattctctgttagtaccaagtgttcaagagcttgccaaacagcacctaaccaatattccggacaggtatgtccgcccacaacaagaatctctggtcgtatcttccggagcatcagttccagttatcgatcttcaaaagttgatttcagggaataccatagattctgagctacaaaagcttcactctgcttgccaagaatggggtttcctacaggttgtaaaccatggagtgacaccttcgttactggaggacttcaagagagaggttattcaattgttcaaacttccaatggaagaaaagaagaaactgtggcaacagaaagacagctttgaaggtttcgggcatatgtttgttgtatcggaggagcagaagcttgattggagtgacatgtttggcataataaatcttcctcctcatatccgcaaagtggacttgtttcagaagttgccctcgaagctcagagacatcatggaagcatattccaaagaaatcaagaacctaacaatgatcatcgtatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0212P19.2" temp_strand="-" temp_description="C02HBa0212P19.2  AC215423.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0212P19 sequenced_by:kribb upload_account_name:korea">
        <position start="24768" stop="23216"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24468" g_stop="24201" g_length="268"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="268" r_length="268" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="24200" i_stop="24082" i_length="119">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24081" g_stop="23834" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="269" r_stop="516" r_length="248" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="23833" i_stop="23574" i_length="260">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="23573" g_stop="23516" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="517" r_stop="574" r_length="58" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0212P19.2" gen_strand="-" ref_id="SGN-E267646" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>574</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0212P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E267646" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24468" e_stop="24201"/>
          <exon e_start="24081" e_stop="23834"/>
          <exon e_start="23573" e_stop="23516"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCAAGTTTGCAAGAAGAGCAAATGGAGTCAACGCCGGAAAAATTGAACTTTGGAAATTCTCTGTTAGTACCAAGTGTTCAAGAGCTTGCCAAACAGCACCTAACCAATATTCCGGACAGGTATGTCCGCCCACAACAAGAATCTCTGGTCGTATCTTCCGGAGCATCAGTTCCAGTTATCGATCTTCAAAAGTTGATTTCAGGGAATACCATAGATTCTGAGCTACAAAAGCTTCACTCTGCTTGCCAAGAATGGGGTTTCCTACAGGTTTCAATTTCTTCGGAATTTTGTTCAATTATTTCGTTGTGTTTGTTACGAATGCATTTTATTTGAATTGAAAATGACTTATTGGTTGAGAAATTAACTCACATATTGTTGAATGTTAGGTTGTAAACCATGGAGTGACACCTTCGTTACTGGAGGACTTCAAGAGAGAGGTTATTCAATTGTTCAAACTTCCAATGGAAGAAAAGAAGAAACTGTGGCAACAGAAAGACAGCTTTGAAGGTTTCGGGCATATGTTTGTTGTATCGGAGGAGCAGAAGCTTGATTGGAGTGACATGTTTGGCATAATAAATCTTCCTCCTCATATCCGCAAAGTGGACTTGTTTCAGAAGTTGCCCTCGAAGCTCAGGTGGCCATCTCCTTACTCTCTCTCAGCACATGCTTACTCGACGCCCTTACTTGTCTTTCTTTTGTATAAGAAAAGTCAAGAAATCGACTTTGTTCAGTTATCTCTACTAGTTTATGAACTATTTAAGCAGTAAACTACTCTATCCAACGGTATCAACCAATTCTTGAAATTTAAATTCGTCCCACAGACCATTTTGTCTAATGTGTGCCTTGATCTTCGCTCTCCTCATCTCTTAATATGTTTGTGTGTTTGAAATGCAGAGACATCATGGAAGCATATTCCAAAGAAATCAAGAACCTAACAATGATCATCGTATGT</genome_strand>
        <mrna_strand>TTCAAGTTTGCAAGAAGAGCAAATGGAGTCAACGCCGGAAAAATTGAACTTTGGAAATTCTCTGTTAGTACCAAGTGTTCAAGAGCTTGCCAAACAGCACCTAACCAATATTCCGGACAGGTATGTCCGCCCACAACAAGAATCTCTGGTCGTATCTTCCGGAGCATCAGTTCCAGTTATCGATCTTCAAAAGTTGATTTCAGGGAATACCATAGATTCTGAGCTACAAAAGCTTCACTCTGCTTGCCAAGAATGGGGTTTCCTACAG.......................................................................................................................GTTGTAAACCATGGAGTGACACCTTCGTTACTGGAGGACTTCAAGAGAGAGGTTATTCAATTGTTCAAACTTCCAATGGAAGAAAAGAAGAAACTGTGGCAACAGAAAGACAGCTTTGAAGGTTTCGGGCATATGTTTGTTGTATCGGAGGAGCAGAAGCTTGATTGGAGTGACATGTTTGGCATAATAAATCTTCCTCCTCATATCCGCAAAGTGGACTTGTTTCAGAAGTTGCCCTCGAAGCTCAG....................................................................................................................................................................................................................................................................AGACATCATGGAAGCATATTCCAAAGAAATCAAGAACCTAACAATGATCATCGTATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E395443" ref_strand="+" ref_description="SGN-E395443 [TUS-16-K20]">
      <seq>attctctgttagtaccaagtgttcaagagcttgccaaacagcacctaaccaatattccggacaggtatgtccgcccacaacaagaatctctggtcgtatcttccggagcatcagttccagttatcgatcttcaaaagttgatttcagggaataccatagattctgagctacaaaagcttcactctgcttgccaagaatggggtttcctacaggttgtaaaccatggagtgacaccttcgttactggaggacttcaagagagaggttattcaattgttcaaacttccaatggaagaaaagaagaaactgtggcaacagaaagacagctttgaaggtttcgggcatatgtttgttgtatcggaggagcagaagcttgattggagtgacatgtttggcataataaatcttcctcctcatatccgcaaagtggacttgtttcagaagttgccctcgaagctcaggtggccatctccttactctctctcagcacatgcttactcgacgcccttacttgtctttcttttgtataagaaaagtcaagaaatcgactttgttcagttatctctactagtttatgaactatttaagcagtaaactactctatccaacggtatcaaccatttcttgatatttaaattcgtcccacagaccattttgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0212P19.2" temp_strand="-" temp_description="C02HBa0212P19.2  AC215423.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0212P19 sequenced_by:kribb upload_account_name:korea">
        <position start="24712" stop="23337"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24412" g_stop="24201" g_length="212"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="212" r_length="212" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="24200" i_stop="24082" i_length="119">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24081" g_stop="23637" g_length="445"/>
          <reference_exon_boundary r_type="cDNA" r_start="213" r_stop="657" r_length="445" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0212P19.2" gen_strand="-" ref_id="SGN-E395443" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>657</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0212P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E395443" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24412" e_stop="24201"/>
          <exon e_start="24081" e_stop="23637"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTCTCTGTTAGTACCAAGTGTTCAAGAGCTTGCCAAACAGCACCTAACCAATATTCCGGACAGGTATGTCCGCCCACAACAAGAATCTCTGGTCGTATCTTCCGGAGCATCAGTTCCAGTTATCGATCTTCAAAAGTTGATTTCAGGGAATACCATAGATTCTGAGCTACAAAAGCTTCACTCTGCTTGCCAAGAATGGGGTTTCCTACAGGTTTCAATTTCTTCGGAATTTTGTTCAATTATTTCGTTGTGTTTGTTACGAATGCATTTTATTTGAATTGAAAATGACTTATTGGTTGAGAAATTAACTCACATATTGTTGAATGTTAGGTTGTAAACCATGGAGTGACACCTTCGTTACTGGAGGACTTCAAGAGAGAGGTTATTCAATTGTTCAAACTTCCAATGGAAGAAAAGAAGAAACTGTGGCAACAGAAAGACAGCTTTGAAGGTTTCGGGCATATGTTTGTTGTATCGGAGGAGCAGAAGCTTGATTGGAGTGACATGTTTGGCATAATAAATCTTCCTCCTCATATCCGCAAAGTGGACTTGTTTCAGAAGTTGCCCTCGAAGCTCAGGTGGCCATCTCCTTACTCTCTCTCAGCACATGCTTACTCGACGCCCTTACTTGTCTTTCTTTTGTATAAGAAAAGTCAAGAAATCGACTTTGTTCAGTTATCTCTACTAGTTTATGAACTATTTAAGCAGTAAACTACTCTATCCAACGGTATCAACCAATTCTTGAAATTTAAATTCGTCCCACAGACCATTTTGT</genome_strand>
        <mrna_strand>ATTCTCTGTTAGTACCAAGTGTTCAAGAGCTTGCCAAACAGCACCTAACCAATATTCCGGACAGGTATGTCCGCCCACAACAAGAATCTCTGGTCGTATCTTCCGGAGCATCAGTTCCAGTTATCGATCTTCAAAAGTTGATTTCAGGGAATACCATAGATTCTGAGCTACAAAAGCTTCACTCTGCTTGCCAAGAATGGGGTTTCCTACAG.......................................................................................................................GTTGTAAACCATGGAGTGACACCTTCGTTACTGGAGGACTTCAAGAGAGAGGTTATTCAATTGTTCAAACTTCCAATGGAAGAAAAGAAGAAACTGTGGCAACAGAAAGACAGCTTTGAAGGTTTCGGGCATATGTTTGTTGTATCGGAGGAGCAGAAGCTTGATTGGAGTGACATGTTTGGCATAATAAATCTTCCTCCTCATATCCGCAAAGTGGACTTGTTTCAGAAGTTGCCCTCGAAGCTCAGGTGGCCATCTCCTTACTCTCTCTCAGCACATGCTTACTCGACGCCCTTACTTGTCTTTCTTTTGTATAAGAAAAGTCAAGAAATCGACTTTGTTCAGTTATCTCTACTAGTTTATGAACTATTTAAGCAGTAAACTACTCTATCCAACGGTATCAACCATTTCTTGATATTTAAATTCGTCCCACAGACCATTTTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E204474" ref_strand="+" ref_description="SGN-E204474 [cLEC-24-G23]">
      <seq>ttctctgttagtaccaagtgttcaagagcttgccaaacagcacctaaccaatattccggacaggtatgtccgcccacaacaagaatctctggtcgtatcttccggagcatcagttccagttatcgatcttcaaaagttgatttcacggaataccatagattctgagctacaaaagcttcactctgcttgccaagaatggggtttcctacaggttgtaaaccatggagtgacaccttcgttactggaggacttcaagagagaggttattcaattgttcaaacttccaatggaagaaaagaagaaactgtggcaacagaaagacagctttgaaggtttcgggcatatgtttgttgtatcggaggagcagaagcttgattggagtgacatgtttggcataataaatcttcctcctcatatccgcaaagtggac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0212P19.2" temp_strand="-" temp_description="C02HBa0212P19.2  AC215423.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0212P19 sequenced_by:kribb upload_account_name:korea">
        <position start="24711" stop="23563"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24411" g_stop="24201" g_length="211"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="211" r_length="211" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="24200" i_stop="24082" i_length="119">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24081" g_stop="23863" g_length="219"/>
          <reference_exon_boundary r_type="cDNA" r_start="212" r_stop="430" r_length="219" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0212P19.2" gen_strand="-" ref_id="SGN-E204474" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>430</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0212P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E204474" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24411" e_stop="24201"/>
          <exon e_start="24081" e_stop="23863"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTCTGTTAGTACCAAGTGTTCAAGAGCTTGCCAAACAGCACCTAACCAATATTCCGGACAGGTATGTCCGCCCACAACAAGAATCTCTGGTCGTATCTTCCGGAGCATCAGTTCCAGTTATCGATCTTCAAAAGTTGATTTCAGGGAATACCATAGATTCTGAGCTACAAAAGCTTCACTCTGCTTGCCAAGAATGGGGTTTCCTACAGGTTTCAATTTCTTCGGAATTTTGTTCAATTATTTCGTTGTGTTTGTTACGAATGCATTTTATTTGAATTGAAAATGACTTATTGGTTGAGAAATTAACTCACATATTGTTGAATGTTAGGTTGTAAACCATGGAGTGACACCTTCGTTACTGGAGGACTTCAAGAGAGAGGTTATTCAATTGTTCAAACTTCCAATGGAAGAAAAGAAGAAACTGTGGCAACAGAAAGACAGCTTTGAAGGTTTCGGGCATATGTTTGTTGTATCGGAGGAGCAGAAGCTTGATTGGAGTGACATGTTTGGCATAATAAATCTTCCTCCTCATATCCGCAAAGTGGAC</genome_strand>
        <mrna_strand>TTCTCTGTTAGTACCAAGTGTTCAAGAGCTTGCCAAACAGCACCTAACCAATATTCCGGACAGGTATGTCCGCCCACAACAAGAATCTCTGGTCGTATCTTCCGGAGCATCAGTTCCAGTTATCGATCTTCAAAAGTTGATTTCACGGAATACCATAGATTCTGAGCTACAAAAGCTTCACTCTGCTTGCCAAGAATGGGGTTTCCTACAG.......................................................................................................................GTTGTAAACCATGGAGTGACACCTTCGTTACTGGAGGACTTCAAGAGAGAGGTTATTCAATTGTTCAAACTTCCAATGGAAGAAAAGAAGAAACTGTGGCAACAGAAAGACAGCTTTGAAGGTTTCGGGCATATGTTTGTTGTATCGGAGGAGCAGAAGCTTGATTGGAGTGACATGTTTGGCATAATAAATCTTCCTCCTCATATCCGCAAAGTGGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E277411" ref_strand="+" ref_description="SGN-E277411 [cLER-3-B23]">
      <seq>tttcaagtttgcaagaagagcaaatggagtcaacgccggaaaaattgaactttggaaattctctgttagtaccaagtgttcaagagcttgccaaacagcacctaaccaatattccggacaggtatgtccgcccacaacaagaatctctggtcgtatcttccggagcatcagttccagttatcgatcttcaaaagttgatttcagggaataccatagattctgagctacaaaagcttcactctgcttgccaagaatggggtttcctacaggttgtaaaccatggagtgacaccttcgttactggaggacttcaagagagaggttattcaattgttcaaacttccaatggaagaaaagaagaaactgtggcaacagaaagacagctttgaaggtttcgggcatatgtttgttgtatcggaggagcagaagcttgattggagtgacatgtttggcataataa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0212P19.2" temp_strand="-" temp_description="C02HBa0212P19.2  AC215423.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0212P19 sequenced_by:kribb upload_account_name:korea">
        <position start="24769" stop="23592"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24469" g_stop="24201" g_length="269"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="269" r_length="269" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="24200" i_stop="24082" i_length="119">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24081" g_stop="23892" g_length="190"/>
          <reference_exon_boundary r_type="cDNA" r_start="270" r_stop="459" r_length="190" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0212P19.2" gen_strand="-" ref_id="SGN-E277411" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>459</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0212P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E277411" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24469" e_stop="24201"/>
          <exon e_start="24081" e_stop="23892"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCAAGTTTGCAAGAAGAGCAAATGGAGTCAACGCCGGAAAAATTGAACTTTGGAAATTCTCTGTTAGTACCAAGTGTTCAAGAGCTTGCCAAACAGCACCTAACCAATATTCCGGACAGGTATGTCCGCCCACAACAAGAATCTCTGGTCGTATCTTCCGGAGCATCAGTTCCAGTTATCGATCTTCAAAAGTTGATTTCAGGGAATACCATAGATTCTGAGCTACAAAAGCTTCACTCTGCTTGCCAAGAATGGGGTTTCCTACAGGTTTCAATTTCTTCGGAATTTTGTTCAATTATTTCGTTGTGTTTGTTACGAATGCATTTTATTTGAATTGAAAATGACTTATTGGTTGAGAAATTAACTCACATATTGTTGAATGTTAGGTTGTAAACCATGGAGTGACACCTTCGTTACTGGAGGACTTCAAGAGAGAGGTTATTCAATTGTTCAAACTTCCAATGGAAGAAAAGAAGAAACTGTGGCAACAGAAAGACAGCTTTGAAGGTTTCGGGCATATGTTTGTTGTATCGGAGGAGCAGAAGCTTGATTGGAGTGACATGTTTGGCATAATAA</genome_strand>
        <mrna_strand>TTTCAAGTTTGCAAGAAGAGCAAATGGAGTCAACGCCGGAAAAATTGAACTTTGGAAATTCTCTGTTAGTACCAAGTGTTCAAGAGCTTGCCAAACAGCACCTAACCAATATTCCGGACAGGTATGTCCGCCCACAACAAGAATCTCTGGTCGTATCTTCCGGAGCATCAGTTCCAGTTATCGATCTTCAAAAGTTGATTTCAGGGAATACCATAGATTCTGAGCTACAAAAGCTTCACTCTGCTTGCCAAGAATGGGGTTTCCTACAG.......................................................................................................................GTTGTAAACCATGGAGTGACACCTTCGTTACTGGAGGACTTCAAGAGAGAGGTTATTCAATTGTTCAAACTTCCAATGGAAGAAAAGAAGAAACTGTGGCAACAGAAAGACAGCTTTGAAGGTTTCGGGCATATGTTTGTTGTATCGGAGGAGCAGAAGCTTGATTGGAGTGACATGTTTGGCATAATAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E201437" ref_strand="+" ref_description="SGN-E201437 [cLEC-4-A15]">
      <seq>gcaaatggagtcaacgccggaaaaattgaactttggaaattctctgttagtaccaagtgttcaagagcttgccaaacagcacctaaccaatattccggacaggtatgtacgtccacaacaagaatctctggtcgtatcttacggagcattagttacagttatcgatcttcaaaagttgatttcagggaataccatagattctgagctacaaaagcttcactctgcttgccaagaatggggtttcctacaggttgtaaaccatggagtgacaccttcgttactggaggacttcaagagagaggttattcaattgttcaaacttccaatggaagaaaagaagaaactgtggcaacagaaagacagctttgaaggtttcgggcatatgtttgttgtatcggaagagcagaagcttgattggagtgacatgtttggcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0212P19.2" temp_strand="-" temp_description="C02HBa0212P19.2  AC215423.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0212P19 sequenced_by:kribb upload_account_name:korea">
        <position start="24750" stop="23597"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24450" g_stop="24201" g_length="250"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="250" r_length="250" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="24200" i_stop="24082" i_length="119">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24081" g_stop="23897" g_length="185"/>
          <reference_exon_boundary r_type="cDNA" r_start="251" r_stop="435" r_length="185" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0212P19.2" gen_strand="-" ref_id="SGN-E201437" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>435</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0212P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E201437" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24450" e_stop="24201"/>
          <exon e_start="24081" e_stop="23897"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAAATGGAGTCAACGCCGGAAAAATTGAACTTTGGAAATTCTCTGTTAGTACCAAGTGTTCAAGAGCTTGCCAAACAGCACCTAACCAATATTCCGGACAGGTATGTCCGCCCACAACAAGAATCTCTGGTCGTATCTTCCGGAGCATCAGTTCCAGTTATCGATCTTCAAAAGTTGATTTCAGGGAATACCATAGATTCTGAGCTACAAAAGCTTCACTCTGCTTGCCAAGAATGGGGTTTCCTACAGGTTTCAATTTCTTCGGAATTTTGTTCAATTATTTCGTTGTGTTTGTTACGAATGCATTTTATTTGAATTGAAAATGACTTATTGGTTGAGAAATTAACTCACATATTGTTGAATGTTAGGTTGTAAACCATGGAGTGACACCTTCGTTACTGGAGGACTTCAAGAGAGAGGTTATTCAATTGTTCAAACTTCCAATGGAAGAAAAGAAGAAACTGTGGCAACAGAAAGACAGCTTTGAAGGTTTCGGGCATATGTTTGTTGTATCGGAGGAGCAGAAGCTTGATTGGAGTGACATGTTTGGCAT</genome_strand>
        <mrna_strand>GCAAATGGAGTCAACGCCGGAAAAATTGAACTTTGGAAATTCTCTGTTAGTACCAAGTGTTCAAGAGCTTGCCAAACAGCACCTAACCAATATTCCGGACAGGTATGTACGTCCACAACAAGAATCTCTGGTCGTATCTTACGGAGCATTAGTTACAGTTATCGATCTTCAAAAGTTGATTTCAGGGAATACCATAGATTCTGAGCTACAAAAGCTTCACTCTGCTTGCCAAGAATGGGGTTTCCTACAG.......................................................................................................................GTTGTAAACCATGGAGTGACACCTTCGTTACTGGAGGACTTCAAGAGAGAGGTTATTCAATTGTTCAAACTTCCAATGGAAGAAAAGAAGAAACTGTGGCAACAGAAAGACAGCTTTGAAGGTTTCGGGCATATGTTTGTTGTATCGGAAGAGCAGAAGCTTGATTGGAGTGACATGTTTGGCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E303084" ref_strand="+" ref_description="SGN-E303084 [cLEW-26-D10]">
      <seq>ttattttttcaagtttgcaagaagagcaaatggagtcaacgccggaaaaattgaactttggaaattctctgttagtaccaagtgttcaagagcttgccaaacagcacctaaccaatattccggacaggtatgtccgcccacaacaagaatctctggtcgtatcttccggagcatcagttccagttatcgatcttcaaaagttgatttcagggaataccatagattctgagctacaaaagcttcactctgcttgccaagaatggggtttcctacaggttgtaaaccatggagtgacaccttcgttactggaggacttcaagagagaggttattcaattgttcaaacttccaatggaagaaaagaagaaactgtggcaacagaaagacagctttgaaggtttcgggcatatgtttgttgtatcggaggagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0212P19.2" temp_strand="-" temp_description="C02HBa0212P19.2  AC215423.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0212P19 sequenced_by:kribb upload_account_name:korea">
        <position start="24775" stop="23628"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24475" g_stop="24201" g_length="275"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="275" r_length="275" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="24200" i_stop="24082" i_length="119">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24081" g_stop="23928" g_length="154"/>
          <reference_exon_boundary r_type="cDNA" r_start="276" r_stop="429" r_length="154" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0212P19.2" gen_strand="-" ref_id="SGN-E303084" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>429</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0212P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E303084" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24475" e_stop="24201"/>
          <exon e_start="24081" e_stop="23928"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATTTTTTCAAGTTTGCAAGAAGAGCAAATGGAGTCAACGCCGGAAAAATTGAACTTTGGAAATTCTCTGTTAGTACCAAGTGTTCAAGAGCTTGCCAAACAGCACCTAACCAATATTCCGGACAGGTATGTCCGCCCACAACAAGAATCTCTGGTCGTATCTTCCGGAGCATCAGTTCCAGTTATCGATCTTCAAAAGTTGATTTCAGGGAATACCATAGATTCTGAGCTACAAAAGCTTCACTCTGCTTGCCAAGAATGGGGTTTCCTACAGGTTTCAATTTCTTCGGAATTTTGTTCAATTATTTCGTTGTGTTTGTTACGAATGCATTTTATTTGAATTGAAAATGACTTATTGGTTGAGAAATTAACTCACATATTGTTGAATGTTAGGTTGTAAACCATGGAGTGACACCTTCGTTACTGGAGGACTTCAAGAGAGAGGTTATTCAATTGTTCAAACTTCCAATGGAAGAAAAGAAGAAACTGTGGCAACAGAAAGACAGCTTTGAAGGTTTCGGGCATATGTTTGTTGTATCGGAGGAGC</genome_strand>
        <mrna_strand>TTATTTTTTCAAGTTTGCAAGAAGAGCAAATGGAGTCAACGCCGGAAAAATTGAACTTTGGAAATTCTCTGTTAGTACCAAGTGTTCAAGAGCTTGCCAAACAGCACCTAACCAATATTCCGGACAGGTATGTCCGCCCACAACAAGAATCTCTGGTCGTATCTTCCGGAGCATCAGTTCCAGTTATCGATCTTCAAAAGTTGATTTCAGGGAATACCATAGATTCTGAGCTACAAAAGCTTCACTCTGCTTGCCAAGAATGGGGTTTCCTACAG.......................................................................................................................GTTGTAAACCATGGAGTGACACCTTCGTTACTGGAGGACTTCAAGAGAGAGGTTATTCAATTGTTCAAACTTCCAATGGAAGAAAAGAAGAAACTGTGGCAACAGAAAGACAGCTTTGAAGGTTTCGGGCATATGTTTGTTGTATCGGAGGAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E206358" ref_strand="+" ref_description="SGN-E206358 [cLEC-23-H9]">
      <seq>tctgttagtaccaagtgttcaagagcttgccaaacagcacctaaccaatattccggacaggtatgtccgcccacaacaagaatctctggtcgtatcttccggagcatcagttccagttatcgatcttcaaaagttgatttcagggaataccatagattctgagctacaaaagcttcactctgcttgccaagaatggggtttcctacaggttgtaaaccatggagtgacaccttcgttactggaggacttcaagagagagggtattcaattggtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0212P19.2" temp_strand="-" temp_description="C02HBa0212P19.2  AC215423.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0212P19 sequenced_by:kribb upload_account_name:korea">
        <position start="24708" stop="23716"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24408" g_stop="24201" g_length="208"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="208" r_length="208" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="24200" i_stop="24082" i_length="119">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24081" g_stop="24016" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="209" r_stop="274" r_length="66" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0212P19.2" gen_strand="-" ref_id="SGN-E206358" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>274</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0212P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E206358" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24408" e_stop="24201"/>
          <exon e_start="24081" e_stop="24016"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTGTTAGTACCAAGTGTTCAAGAGCTTGCCAAACAGCACCTAACCAATATTCCGGACAGGTATGTCCGCCCACAACAAGAATCTCTGGTCGTATCTTCCGGAGCATCAGTTCCAGTTATCGATCTTCAAAAGTTGATTTCAGGGAATACCATAGATTCTGAGCTACAAAAGCTTCACTCTGCTTGCCAAGAATGGGGTTTCCTACAGGTTTCAATTTCTTCGGAATTTTGTTCAATTATTTCGTTGTGTTTGTTACGAATGCATTTTATTTGAATTGAAAATGACTTATTGGTTGAGAAATTAACTCACATATTGTTGAATGTTAGGTTGTAAACCATGGAGTGACACCTTCGTTACTGGAGGACTTCAAGAGAGAGGTTATTCAATTGTTC</genome_strand>
        <mrna_strand>TCTGTTAGTACCAAGTGTTCAAGAGCTTGCCAAACAGCACCTAACCAATATTCCGGACAGGTATGTCCGCCCACAACAAGAATCTCTGGTCGTATCTTCCGGAGCATCAGTTCCAGTTATCGATCTTCAAAAGTTGATTTCAGGGAATACCATAGATTCTGAGCTACAAAAGCTTCACTCTGCTTGCCAAGAATGGGGTTTCCTACAG.......................................................................................................................GTTGTAAACCATGGAGTGACACCTTCGTTACTGGAGGACTTCAAGAGAGAGGGTATTCAATTGGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E203756" ref_strand="+" ref_description="SGN-E203756 [cLEC-17-K10]">
      <seq>tagcagccattccatcgcgatatattcgtgatgatttagaaaagacatcctgttccatattaatgcctcaagttccagtgattgatatggaaaaactgctgataattggagatcatgataccgcagagcttgagaggcttcattttgcttgcaaagaatggggattttttcaggtggtgaatcatggggtgagttcattgttgttggagaaagtgaagtcagaaatccgagcatttttcgatctaccaatggaagagaagaagaagtttgatcaacaagaacgggacgttgaaggatttggacaagcttttgttttttctcaagagcaaaagttagattggggtgacttgttttacatgaccactctccctactaatttgagaaaacctgatttatttcccaagctccctcactcacttagggagaccatggaagaacataccaaggaatataagaacctagccataacgatcttgtgtcaattggcaaaggttttagggatggatgaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0212P19.2" temp_strand="-" temp_description="C02HBa0212P19.2  AC215423.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0212P19 sequenced_by:kribb upload_account_name:korea">
        <position start="34166" stop="32856"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33866" g_stop="33694" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="173" r_length="173" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="33693" i_stop="33613" i_length="81">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="33612" g_stop="33365" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="174" r_stop="421" r_length="248" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="33364" i_stop="33245" i_length="120">
            <donor d_prob="0.959" d_score="0.98"/>
            <acceptor a_prob="0.981" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="33244" g_stop="33156" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="422" r_stop="510" r_length="89" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0212P19.2" gen_strand="-" ref_id="SGN-E203756" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>510</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0212P19.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E203756" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33866" e_stop="33694"/>
          <exon e_start="33612" e_stop="33365"/>
          <exon e_start="33244" e_stop="33156"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGCAGCCATTCCATCGCGATATATTCGTGATGATTTAGAAAAGACATCCTGTTCCATATTAATGCCTCAAGTTCCAGTGATTGATATGGAAAAACTGCTGATAATTGGAGATCATGATACCGCAGAGCTTGAGAGGCTTCATTTTGCTTGCAAAGAATGGGGATTTTTTCAGGTATATTTATATGATTTTTGTTTAGTTTTTGAGTTGTGTAGAAAAGGTCTAGTACTTAAAATACGCGTTGGTCTATTGTAGGTGGTGAATCATGGGGTGAGTTCATTGTTGTTGGAGAAAGTGAAGTCAGAAATCCGAGCATTTTTCGATCTACCAATGGAAGAGAAGAAGAAGTTTGATCAACAAGAAGGGGACGTTGAAGGATTTGGACAAGCTTTTGTTTTTTCTCAAGAGCAAAAGTTAGATTGGGGTGACTTGTTTTACATGACCACTCTCCCTACTAATTTGAGAAAACCTCATTTATTTCCCAAGCTCCCTCACTCACTTAGGTAAATCGTAAAATTAGACATTATTTGTTACATAGGTTAATCATTCAGATCTAAAAAAATGGACGAACTGGATGGTTTTCATCCGCTATTATAGCTAATATGATTCGAAATATAATGTAGGGAGACCATGGAAGAACATAGCAAGGAATTTAAGAACCTAGCCATAAGGATCTTGTGTCAATTGGCAAAGGTTTTAGGGATGGATGAAA</genome_strand>
        <mrna_strand>TAGCAGCCATTCCATCGCGATATATTCGTGATGATTTAGAAAAGACATCCTGTTCCATATTAATGCCTCAAGTTCCAGTGATTGATATGGAAAAACTGCTGATAATTGGAGATCATGATACCGCAGAGCTTGAGAGGCTTCATTTTGCTTGCAAAGAATGGGGATTTTTTCAG.................................................................................GTGGTGAATCATGGGGTGAGTTCATTGTTGTTGGAGAAAGTGAAGTCAGAAATCCGAGCATTTTTCGATCTACCAATGGAAGAGAAGAAGAAGTTTGATCAACAAGAACGGGACGTTGAAGGATTTGGACAAGCTTTTGTTTTTTCTCAAGAGCAAAAGTTAGATTGGGGTGACTTGTTTTACATGACCACTCTCCCTACTAATTTGAGAAAACCTGATTTATTTCCCAAGCTCCCTCACTCACTTAG........................................................................................................................GGAGACCATGGAAGAACATACCAAGGAATATAAGAACCTAGCCATAACGATCTTGTGTCAATTGGCAAAGGTTTTAGGGATGGATGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E606385" ref_strand="+" ref_description="SGN-E606385 [22327]">
      <seq>tttttttcagatataatgcagttattacattaactctcctatgaaactggattaagggtgagataaaaatcggtgcatatacacaaggagaagcaggctagtataaacaagaaacgtttcacaaaaatgcgctcttattacaagatctctccatcttcccaatctccaccatcaatattgcatcttcatcttcatcatcatataagtagtcctctttgatgcataagccaagcctttccagagggttctcccccaatatgatagtgaatccatctccattaccactcaaattctcagcttctgaacagcatttac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0212P19-27mM8/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0212P19.2" temp_strand="+" temp_description="C02HBa0212P19.2  AC215423.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0212P19 sequenced_by:kribb upload_account_name:korea">
        <position start="37419" stop="38334"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37723" g_stop="38034" g_length="312"/>
          <reference_exon_boundary r_type="cDNA" r_start="13" r_stop="315" r_length="303" r_score="0.949"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0212P19.2" gen_strand="+" ref_id="SGN-E606385" ref_strand="+">
        <total_alignment_score>0.949</total_alignment_score>
        <cumulative_length_of_scored_exons>312</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0212P19.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E606385" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37723" e_stop="38034"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATATATGCAGTTATTACATTAACTCTCCTATGAAACTGGAATAAGGGTGAGAT-AAAATCGGTGCATATAGACAAGGAGAAGCAGGCTAGGCTAGTATAAACAAGAAACGTTTCACAAAAATGCGCTATTATCACAAGATCTCTCCATCTTCCCAATCTCCACCACCACTCAATATTGCATCTTCATCTTCATCATCATATAAGTAGTCCTCTTTGATGCATAAGCCAAGCCTTTCCAGAGGGTTCTCCCCCAATATGATAGTGAATCCATCTCCATTACCACTCAAATTCTCAGCTTCTGAACAGCATTTAC</genome_strand>
        <mrna_strand>ATA-ATGCAGTTATTACATTAACTCTCCTATGAAACTGGATTAAGGGTGAGATAAAAATCGGTGCATATACACAAGGAGAAGCAGGCTA-G-TA-TA-AA-CAAGAAACGTTTCACAAAAATGCGCTCTTATTACAAGATCTCTCCATCTTCCCAATCT---CCACCA-TCAATATTGCATCTTCATCTTCATCATCATATAAGTAGTCCTCTTTGATGCATAAGCCAAGCCTTTCCAGAGGGTTCTCCCCCAATATGATAGTGAATCCATCTCCATTACCACTCAAATTCTCAGCTTCTGAACAGCATTTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>38</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="1291" PGL_stop="2041"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="1291" e_stop="2041"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.961"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.961">
            <gDNA_exon_boundary e_start="1291" e_stop="2041" e_length="751"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1291" stop="2041"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E546564" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1301" stop="1893"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E359331" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTCCGATGAGGCTGTGTGCAGGTCCTAATTCGGATTCAAGGTTCATGTAATAGAATGTCGCAACAGAGAGCCTTTCTTCATTTGAGTTTACAATTGCTCTGTGCTCAATACTCCTATACACACCATTGCTCAATATCTGCCAAGTTAAATATATCACATTTACGCGCATAATATTTTCAGGCGGTAGTAGAACATTTTTACCTCCATCATGTCTCCAATATTCACAATCAAAGCATTTGGGAGGGGCTTTATGGGCACCCAAATATCATCTTTTCGGACTTGTAGACCTTCAGTTTCGTTCAGCTGGAAAAGGATGGTGAGGACACCAGGATCAGAATGAGTGCTTAAGCCAATTGCCCTGTTTGGTTCAGGGCAAGGCGGATAATAATTCATCCTCATTGACTGCATACCATCACTGAATAGATCTCTCATTTCCTCTTCGTCCATCCTTAAAGCCTTTGTCAATTGGCATACGATGATCCTTGCTAGGCTCTTAATTTCTTTGCAGTAAGCTTCCAAGACGTCCCTACATTTCAATACACACAAACATATTAATTAAAAGATGAGGAGAGCGGGATATAGTTATAAGGAGATAGGCACCTGAGATTCGAGGGCAATTTCTGAAACAAGTCCACTTTGCGGATACGAGGAGGAAGAGTCATTATGCCAAACATATCACTCCAATCAAGCTTCTGCTCCTCCGATACAACGAATGCATTCCCAAAACCTTCCAAGCTGTCTTCCTGTTGCC</gDNA_template>
            <first_frame> V  R  *  G  C  V  Q  V  L  I  R  I  Q  G  S  C  N  R  M  S  Q  Q  R  A  F  L  H  L  S  L  Q  L  L  C  A  Q  Y  S  Y  T  H  H  C  S  I  S  A  K  L  N  I  S  H  L  R  A  *  Y  F  Q  A  V  V  E  H  F  Y  L  H  H  V  S  N  I  H  N  Q  S  I  W  E  G  L  Y  G  H  P  N  I  I  F  S  D  L  *  T  F  S  F  V  Q  L  E  K  D  G  E  D  T  R  I  R  M  S  A  *  A  N  C  P  V  W  F  R  A  R  R  I  I  I  H  P  H  *  L  H  T  I  T  E  *  I  S  H  F  L  F  V  H  P  *  S  L  C  Q  L  A  Y  D  D  P  C  *  A  L  N  F  F  A  V  S  F  Q  D  V  P  T  F  Q  Y  T  Q  T  Y  *  L  K  D  E  E  S  G  I  *  L  *  G  D  R  H  L  R  F  E  G  N  F  *  N  K  S  T  L  R  I  R  G  G  R  V  I  M  P  N  I  S  L  Q  S  S  F  C  S  S  D  T  T  N  A  F  P  K  P  S  K  L  S  S  C  C  </first_frame>
            <second_frame>  S  D  E  A  V  C  R  S  *  F  G  F  K  V  H  V  I  E  C  R  N  R  E  P  F  F  I  *  V  Y  N  C  S  V  L  N  T  P  I  H  T  I  A  Q  Y  L  P  S  *  I  Y  H  I  Y  A  H  N  I  F  R  R  *  *  N  I  F  T  S  I  M  S  P  I  F  T  I  K  A  F  G  R  G  F  M  G  T  Q  I  S  S  F  R  T  C  R  P  S  V  S  F  S  W  K  R  M  V  R  T  P  G  S  E  *  V  L  K  P  I  A  L  F  G  S  G  Q  G  G  *  *  F  I  L  I  D  C  I  P  S  L  N  R  S  L  I  S  S  S  S  I  L  K  A  F  V  N  W  H  T  M  I  L  A  R  L  L  I  S  L  Q  *  A  S  K  T  S  L  H  F  N  T  H  K  H  I  N  *  K  M  R  R  A  G  Y  S  Y  K  E  I  G  T  *  D  S  R  A  I  S  E  T  S  P  L  C  G  Y  E  E  E  E  S  L  C  Q  T  Y  H  S  N  Q  A  S  A  P  P  I  Q  R  M  H  S  Q  N  L  P  S  C  L  P  V  A </second_frame>
            <third_frame>   P  M  R  L  C  A  G  P  N  S  D  S  R  F  M  *  *  N  V  A  T  E  S  L  S  S  F  E  F  T  I  A  L  C  S  I  L  L  Y  T  P  L  L  N  I  C  Q  V  K  Y  I  T  F  T  R  I  I  F  S  G  G  S  R  T  F  L  P  P  S  C  L  Q  Y  S  Q  S  K  H  L  G  G  A  L  W  A  P  K  Y  H  L  F  G  L  V  D  L  Q  F  R  S  A  G  K  G  W  *  G  H  Q  D  Q  N  E  C  L  S  Q  L  P  C  L  V  Q  G  K  A  D  N  N  S  S  S  L  T  A  Y  H  H  *  I  D  L  S  F  P  L  R  P  S  L  K  P  L  S  I  G  I  R  *  S  L  L  G  S  *  F  L  C  S  K  L  P  R  R  P  Y  I  S  I  H  T  N  I  L  I  K  R  *  G  E  R  D  I  V  I  R  R  *  A  P  E  I  R  G  Q  F  L  K  Q  V  H  F  A  D  T  R  R  K  S  H  Y  A  K  H  I  T  P  I  K  L  L  L  L  R  Y  N  E  C  I  P  K  T  F  Q  A  V  F  L  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0212P19.2" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="1344" stop="1610"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>264</number_coding_nucleotides>
                  <number_encoded_amino_acids>88</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NVATESLSSFEFTIALCSILLYTPLLNICQVKYITFTRIIFSGGSRTFLPPSCLQYSQSKHLGGALWAPKYHLFGLVDLQFRSAGKGW*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="9312" PGL_stop="8187"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="9312" e_stop="8918"/>
            <exon e_start="8200" e_stop="8187"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.731" e_score="0.954"/>
          <exon-only e_score="0.643"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.954">
            <gDNA_exon_boundary e_start="9312" e_stop="8918" e_length="395"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.731">
            <gDNA_intron_boundary i_start="8917" i_stop="8201" i_length="717"/>
          </intron>
          <exon e_serial="2" e_score="0.643">
            <gDNA_exon_boundary e_start="8200" e_stop="8187" e_length="14"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9312" stop="8918"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E234020" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9190" stop="8918"/>
              <exon start="8200" stop="8187"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E234270" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9128" stop="8951"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220248" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GATTCTGACAAATGGAATCTACAAAAGCACTGAACATCGAGCAATTGTGAACGAAGATAAAGAGAGGATTTCCATTGCTACATTTTTGAGCCCCAATCTGGATGGAGATTTAGGTCCAGCTCCTAGTCTCCTCACTCCTCAATGCCCTGCAGAATTTAGGAGGATTGGAGTGGCTGATTACTTCAAAGGATATTTCTCTCGAGAGCTCGTTGGAAAATCATATGTCGATTCTATAAGAATTGGAAATGGAGGCGATGGAAGCAATTGATAAATGTTTGCATTTTATGCCCCCTTGGATACCAACAGATTGTTTGATTTGGATGGACTTTTTACTGTATCATTTTGTGGATGTATAATGTTTGAATAAATTGTGGCATTTGTTGTGGTTGAATAAC : TGGAGAAAAACAAA</gDNA_template>
            <first_frame> D  S  D  K  W  N  L  Q  K  H  *  T  S  S  N  C  E  R  R  *  R  E  D  F  H  C  Y  I  F  E  P  Q  S  G  W  R  F  R  S  S  S  *  S  P  H  S  S  M  P  C  R  I  *  E  D  W  S  G  *  L  L  Q  R  I  F  L  S  R  A  R  W  K  I  I  C  R  F  Y  K  N  W  K  W  R  R  W  K  Q  L  I  N  V  C  I  L  C  P  L  G  Y  Q  Q  I  V  *  F  G  W  T  F  Y  C  I  I  L  W  M  Y  N  V  *  I  N  C  G  I  C  C  G  *  I  T :   G  E  K  Q  </first_frame>
            <second_frame>  I  L  T  N  G  I  Y  K  S  T  E  H  R  A  I  V  N  E  D  K  E  R  I  S  I  A  T  F  L  S  P  N  L  D  G  D  L  G  P  A  P  S  L  L  T  P  Q  C  P  A  E  F  R  R  I  G  V  A  D  Y  F  K  G  Y  F  S  R  E  L  V  G  K  S  Y  V  D  S  I  R  I  G  N  G  G  D  G  S  N  *  *  M  F  A  F  Y  A  P  L  D  T  N  R  L  F  D  L  D  G  L  F  T  V  S  F  C  G  C  I  M  F  E  *  I  V  A  F  V  V  V  E  *   : L  E  K  N  K </second_frame>
            <third_frame>   F  *  Q  M  E  S  T  K  A  L  N  I  E  Q  L  *  T  K  I  K  R  G  F  P  L  L  H  F  *  A  P  I  W  M  E  I  *  V  Q  L  L  V  S  S  L  L  N  A  L  Q  N  L  G  G  L  E  W  L  I  T  S  K  D  I  S  L  E  S  S  L  E  N  H  M  S  I  L  *  E  L  E  M  E  A  M  E  A  I  D  K  C  L  H  F  M  P  P  W  I  P  T  D  C  L  I  W  M  D  F  L  L  Y  H  F  V  D  V  *  C  L  N  K  L  W  H  L  L  W  L  N  N  :  W  R  K  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0212P19.2" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="9311" stop="9045"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>264</number_coding_nucleotides>
                  <number_encoded_amino_acids>88</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ILTNGIYKSTEHRAIVNEDKERISIATFLSPNLDGDLGPAPSLLTPQCPAEFRRIGVADYFKGYFSRELVGKSYVDSIRIGNGGDGSN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="10706" PGL_stop="9460"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="10706" e_stop="10368"/>
            <exon e_start="10074" e_stop="9827"/>
            <exon e_start="9755" e_stop="9460"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.969" e_score="0.979"/>
          <exon-intron don_prob="0.999" acc_prob="0.784" e_score="0.996"/>
          <exon-only e_score="0.980"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.979">
            <gDNA_exon_boundary e_start="10706" e_stop="10368" e_length="339"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.969">
            <gDNA_intron_boundary i_start="10367" i_stop="10075" i_length="293"/>
          </intron>
          <exon e_serial="2" e_score="0.996">
            <gDNA_exon_boundary e_start="10074" e_stop="9827" e_length="248"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.784">
            <gDNA_intron_boundary i_start="9826" i_stop="9756" i_length="71"/>
          </intron>
          <exon e_serial="3" e_score="0.980">
            <gDNA_exon_boundary e_start="9755" e_stop="9460" e_length="296"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10706" stop="10368"/>
              <exon start="10074" stop="9827"/>
              <exon start="9755" stop="9736"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331660" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10706" stop="10368"/>
              <exon start="10074" stop="9884"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331653" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10699" stop="10368"/>
              <exon start="10074" stop="9827"/>
              <exon start="9755" stop="9714"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E329895" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10699" stop="10368"/>
              <exon start="10074" stop="9993"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E330172" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10693" stop="10368"/>
              <exon start="10074" stop="9827"/>
              <exon start="9755" stop="9623"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E334512" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10690" stop="10368"/>
              <exon start="10074" stop="9827"/>
              <exon start="9755" stop="9735"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E330283" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10649" stop="10368"/>
              <exon start="10074" stop="9992"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331661" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10609" stop="10368"/>
              <exon start="10074" stop="9827"/>
              <exon start="9755" stop="9692"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E329296" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10434" stop="10368"/>
              <exon start="10074" stop="9827"/>
              <exon start="9755" stop="9535"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331048" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10034" stop="9827"/>
              <exon start="9755" stop="9460"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E333231" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTATATGATACACGTTATTATTTCATATCTCAATAAGTTTACTTTGTAAAACAAGTTTGAGGGAGAAAAAAAATACAAACTTCATCAATGGAAGAAGCAAAGTTGAGAAAGCTAGGTGGTTCTCTGAAAGTCCCTAACGTTCAAGAACTTGCAAAGCAACAACTAGCAGCCGTTCCATCGCGATATATGCGCGATGATATTGAAAATCAATCATATTCTTCCATATTACCTCAAGTTCCAGTTATTGATATGAAAAAATTGCTGGAAATTGGAGATATTGATGATGATTCGGAACTCGTGAGGCTTCATCTCGCTTGCAAAGAATGGGGATTTTTTCAG : CTGGTGAATCATGGAGTGAATTCCTCATTGATGAAGAAAGTGAAATCGGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGACGAAATTCGAGCAAGAAGAAGGAGATCTCGAAGGATACGGGCAAGCATTTGTTGTATCTGAAGAACAAAAGTTAGATTGGGCTGATATACTTTACATGATCACTCTCCCTACTCATTTGCGAAAACCTCACTTGTTTCCAAAGCTTCCTGCCTCGTTCAG : GGATGCATTGGAACAATACTCAAGAACACTGAAGGAACTTGCTATGAAAATTCTGTACGTAATGGCCAGAGCTTTAGGGATGAAAACAGAGGATATGAATGTACTATTTGAACAAGACGGGACACAAATGATGAGAATAAATTATTATCCTCCTTGTCCTCAACCAGAGCGCGTAATGGGGTTATGCCCCCATACTGATGCTATTGGTCTAGCTATATTACTTCAGGTTAATGAAACGGAAGGTCTTCAAATTAAGAAAGATGGAGCTTGGACTCCGGTTCCATATCTTCCTGATG</gDNA_template>
            <first_frame> L  Y  D  T  R  Y  Y  F  I  S  Q  *  V  Y  F  V  K  Q  V  *  G  R  K  K  I  Q  T  S  S  M  E  E  A  K  L  R  K  L  G  G  S  L  K  V  P  N  V  Q  E  L  A  K  Q  Q  L  A  A  V  P  S  R  Y  M  R  D  D  I  E  N  Q  S  Y  S  S  I  L  P  Q  V  P  V  I  D  M  K  K  L  L  E  I  G  D  I  D  D  D  S  E  L  V  R  L  H  L  A  C  K  E  W  G  F  F  Q  :  L  V  N  H  G  V  N  S  S  L  M  K  K  V  K  S  E  I  R  A  F  F  D  L  P  M  E  E  K  T  K  F  E  Q  E  E  G  D  L  E  G  Y  G  Q  A  F  V  V  S  E  E  Q  K  L  D  W  A  D  I  L  Y  M  I  T  L  P  T  H  L  R  K  P  H  L  F  P  K  L  P  A  S  F  R :   D  A  L  E  Q  Y  S  R  T  L  K  E  L  A  M  K  I  L  Y  V  M  A  R  A  L  G  M  K  T  E  D  M  N  V  L  F  E  Q  D  G  T  Q  M  M  R  I  N  Y  Y  P  P  C  P  Q  P  E  R  V  M  G  L  C  P  H  T  D  A  I  G  L  A  I  L  L  Q  V  N  E  T  E  G  L  Q  I  K  K  D  G  A  W  T  P  V  P  Y  L  P  D  </first_frame>
            <second_frame>  Y  M  I  H  V  I  I  S  Y  L  N  K  F  T  L  *  N  K  F  E  G  E  K  K  Y  K  L  H  Q  W  K  K  Q  S  *  E  S  *  V  V  L  *  K  S  L  T  F  K  N  L  Q  S  N  N  *  Q  P  F  H  R  D  I  C  A  M  I  L  K  I  N  H  I  L  P  Y  Y  L  K  F  Q  L  L  I  *  K  N  C  W  K  L  E  I  L  M  M  I  R  N  S  *  G  F  I  S  L  A  K  N  G  D  F  F  S :   W  *  I  M  E  *  I  P  H  *  *  R  K  *  N  R  K  S  E  H  F  S  I  Y  Q  W  K  R  R  R  N  S  S  K  K  K  E  I  S  K  D  T  G  K  H  L  L  Y  L  K  N  K  S  *  I  G  L  I  Y  F  T  *  S  L  S  L  L  I  C  E  N  L  T  C  F  Q  S  F  L  P  R  S   : G  M  H  W  N  N  T  Q  E  H  *  R  N  L  L  *  K  F  C  T  *  W  P  E  L  *  G  *  K  Q  R  I  *  M  Y  Y  L  N  K  T  G  H  K  *  *  E  *  I  I  I  L  L  V  L  N  Q  S  A  *  W  G  Y  A  P  I  L  M  L  L  V  *  L  Y  Y  F  R  L  M  K  R  K  V  F  K  L  R  K  M  E  L  G  L  R  F  H  I  F  L  M </second_frame>
            <third_frame>   I  *  Y  T  L  L  F  H  I  S  I  S  L  L  C  K  T  S  L  R  E  K  K  N  T  N  F  I  N  G  R  S  K  V  E  K  A  R  W  F  S  E  S  P  *  R  S  R  T  C  K  A  T  T  S  S  R  S  I  A  I  Y  A  R  *  Y  *  K  S  I  I  F  F  H  I  T  S  S  S  S  Y  *  Y  E  K  I  A  G  N  W  R  Y  *  *  *  F  G  T  R  E  A  S  S  R  L  Q  R  M  G  I  F  S   : A  G  E  S  W  S  E  F  L  I  D  E  E  S  E  I  G  N  Q  S  I  F  R  S  T  N  G  R  E  D  E  I  R  A  R  R  R  R  S  R  R  I  R  A  S  I  C  C  I  *  R  T  K  V  R  L  G  *  Y  T  L  H  D  H  S  P  Y  S  F  A  K  T  S  L  V  S  K  A  S  C  L  V  Q  :  G  C  I  G  T  I  L  K  N  T  E  G  T  C  Y  E  N  S  V  R  N  G  Q  S  F  R  D  E  N  R  G  Y  E  C  T  I  *  T  R  R  D  T  N  D  E  N  K  L  L  S  S  L  S  S  T  R  A  R  N  G  V  M  P  P  Y  *  C  Y  W  S  S  Y  I  T  S  G  *  *  N  G  R  S  S  N  *  E  R  W  S  L  D  S  G  S  I  S  S  *   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0212P19.2" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="10646" stop="10368"/>
                    <exon start="10074" stop="9827"/>
                    <exon start="9755" stop="9461"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>822</number_coding_nucleotides>
                  <number_encoded_amino_acids>274</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GRKKIQTSSMEEAKLRKLGGSLKVPNVQELAKQQLAAVPSRYMRDDIENQSYSSILPQVPVIDMKKLLEIGDIDDDSELVRLHLACKEWGFFQLVNHGVNSSLMKKVKSEIRAFFDLPMEEKTKFEQEEGDLEGYGQAFVVSEEQKLDWADILYMITLPTHLRKPHLFPKLPASFRDALEQYSRTLKELAMKILYVMARALGMKTEDMNVLFEQDGTQMMRINYYPPCPQPERVMGLCPHTDAIGLAILLQVNETEGLQIKKDGAWTPVPYLPD</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="10706" e_stop="10368"/>
            <exon e_start="10074" e_stop="9608"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.969" e_score="0.979"/>
          <exon-only e_score="0.933"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.979">
            <gDNA_exon_boundary e_start="10706" e_stop="10368" e_length="339"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.969">
            <gDNA_intron_boundary i_start="10367" i_stop="10075" i_length="293"/>
          </intron>
          <exon e_serial="2" e_score="0.933">
            <gDNA_exon_boundary e_start="10074" e_stop="9608" e_length="467"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10706" stop="10368"/>
              <exon start="10074" stop="9884"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331653" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10699" stop="10368"/>
              <exon start="10074" stop="9993"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E330172" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10649" stop="10368"/>
              <exon start="10074" stop="9992"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331661" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10074" stop="9608"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355747" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10074" stop="9609"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355750" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTATATGATACACGTTATTATTTCATATCTCAATAAGTTTACTTTGTAAAACAAGTTTGAGGGAGAAAAAAAATACAAACTTCATCAATGGAAGAAGCAAAGTTGAGAAAGCTAGGTGGTTCTCTGAAAGTCCCTAACGTTCAAGAACTTGCAAAGCAACAACTAGCAGCCGTTCCATCGCGATATATGCGCGATGATATTGAAAATCAATCATATTCTTCCATATTACCTCAAGTTCCAGTTATTGATATGAAAAAATTGCTGGAAATTGGAGATATTGATGATGATTCGGAACTCGTGAGGCTTCATCTCGCTTGCAAAGAATGGGGATTTTTTCAG : CTGGTGAATCATGGAGTGAATTCCTCATTGATGAAGAAAGTGAAATCGGAAATCAGAGCATTTTTCGATCTACCAATGGAAGAGAAGACGAAATTCGAGCAAGAAGAAGGAGATCTCGAAGGATACGGGCAAGCATTTGTTGTATCTGAAGAACAAAAGTTAGATTGGGCTGATATACTTTACATGATCACTCTCCCTACTCATTTGCGAAAACCTCACTTGTTTCCAAAGCTTCCTGCCTCGTTCAGGTACGATAATATATAACTGAGTTTACGATTAAATATTTAGTTCACAATATTTAAATTCTTGGACCGATAAGGGATGCATTGGAACAATACTCAAGAACACTGAAGGAACTTGCTATGAAAATTCTGTACGTAATGGCCAGAGCTTTAGGGATGAAAACAGAGGATATGAATGTACTATTTGAACAAGACGGGACACAAATGATGAGAATAAATTATTAT</gDNA_template>
            <first_frame> L  Y  D  T  R  Y  Y  F  I  S  Q  *  V  Y  F  V  K  Q  V  *  G  R  K  K  I  Q  T  S  S  M  E  E  A  K  L  R  K  L  G  G  S  L  K  V  P  N  V  Q  E  L  A  K  Q  Q  L  A  A  V  P  S  R  Y  M  R  D  D  I  E  N  Q  S  Y  S  S  I  L  P  Q  V  P  V  I  D  M  K  K  L  L  E  I  G  D  I  D  D  D  S  E  L  V  R  L  H  L  A  C  K  E  W  G  F  F  Q  :  L  V  N  H  G  V  N  S  S  L  M  K  K  V  K  S  E  I  R  A  F  F  D  L  P  M  E  E  K  T  K  F  E  Q  E  E  G  D  L  E  G  Y  G  Q  A  F  V  V  S  E  E  Q  K  L  D  W  A  D  I  L  Y  M  I  T  L  P  T  H  L  R  K  P  H  L  F  P  K  L  P  A  S  F  R  Y  D  N  I  *  L  S  L  R  L  N  I  *  F  T  I  F  K  F  L  D  R  *  G  M  H  W  N  N  T  Q  E  H  *  R  N  L  L  *  K  F  C  T  *  W  P  E  L  *  G  *  K  Q  R  I  *  M  Y  Y  L  N  K  T  G  H  K  *  *  E  *  I  I   </first_frame>
            <second_frame>  Y  M  I  H  V  I  I  S  Y  L  N  K  F  T  L  *  N  K  F  E  G  E  K  K  Y  K  L  H  Q  W  K  K  Q  S  *  E  S  *  V  V  L  *  K  S  L  T  F  K  N  L  Q  S  N  N  *  Q  P  F  H  R  D  I  C  A  M  I  L  K  I  N  H  I  L  P  Y  Y  L  K  F  Q  L  L  I  *  K  N  C  W  K  L  E  I  L  M  M  I  R  N  S  *  G  F  I  S  L  A  K  N  G  D  F  F  S :   W  *  I  M  E  *  I  P  H  *  *  R  K  *  N  R  K  S  E  H  F  S  I  Y  Q  W  K  R  R  R  N  S  S  K  K  K  E  I  S  K  D  T  G  K  H  L  L  Y  L  K  N  K  S  *  I  G  L  I  Y  F  T  *  S  L  S  L  L  I  C  E  N  L  T  C  F  Q  S  F  L  P  R  S  G  T  I  I  Y  N  *  V  Y  D  *  I  F  S  S  Q  Y  L  N  S  W  T  D  K  G  C  I  G  T  I  L  K  N  T  E  G  T  C  Y  E  N  S  V  R  N  G  Q  S  F  R  D  E  N  R  G  Y  E  C  T  I  *  T  R  R  D  T  N  D  E  N  K  L  L  </second_frame>
            <third_frame>   I  *  Y  T  L  L  F  H  I  S  I  S  L  L  C  K  T  S  L  R  E  K  K  N  T  N  F  I  N  G  R  S  K  V  E  K  A  R  W  F  S  E  S  P  *  R  S  R  T  C  K  A  T  T  S  S  R  S  I  A  I  Y  A  R  *  Y  *  K  S  I  I  F  F  H  I  T  S  S  S  S  Y  *  Y  E  K  I  A  G  N  W  R  Y  *  *  *  F  G  T  R  E  A  S  S  R  L  Q  R  M  G  I  F  S   : A  G  E  S  W  S  E  F  L  I  D  E  E  S  E  I  G  N  Q  S  I  F  R  S  T  N  G  R  E  D  E  I  R  A  R  R  R  R  S  R  R  I  R  A  S  I  C  C  I  *  R  T  K  V  R  L  G  *  Y  T  L  H  D  H  S  P  Y  S  F  A  K  T  S  L  V  S  K  A  S  C  L  V  Q  V  R  *  Y  I  T  E  F  T  I  K  Y  L  V  H  N  I  *  I  L  G  P  I  R  D  A  L  E  Q  Y  S  R  T  L  K  E  L  A  M  K  I  L  Y  V  M  A  R  A  L  G  M  K  T  E  D  M  N  V  L  F  E  Q  D  G  T  Q  M  M  R  I  N  Y  Y </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0212P19.2" strand="-"/>
                <serials PGL_serial="3" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="10646" stop="10368"/>
                    <exon start="10074" stop="9811"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>540</number_coding_nucleotides>
                  <number_encoded_amino_acids>180</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GRKKIQTSSMEEAKLRKLGGSLKVPNVQELAKQQLAAVPSRYMRDDIENQSYSSILPQVPVIDMKKLLEIGDIDDDSELVRLHLACKEWGFFQLVNHGVNSSLMKKVKSEIRAFFDLPMEEKTKFEQEEGDLEGYGQAFVVSEEQKLDWADILYMITLPTHLRKPHLFPKLPASFRYDNI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="13696" PGL_stop="11675"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="13696" e_stop="13402"/>
            <exon e_start="13280" e_stop="12968"/>
            <exon e_start="11713" e_stop="11675"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="0.905"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.907"/>
          <exon-only e_score="0.667"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.905">
            <gDNA_exon_boundary e_start="13696" e_stop="13402" e_length="295"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="13401" i_stop="13281" i_length="121"/>
          </intron>
          <exon e_serial="2" e_score="0.907">
            <gDNA_exon_boundary e_start="13280" e_stop="12968" e_length="313"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="12967" i_stop="11714" i_length="1254"/>
          </intron>
          <exon e_serial="3" e_score="0.667">
            <gDNA_exon_boundary e_start="11713" e_stop="11675" e_length="39"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13696" stop="13402"/>
              <exon start="13280" stop="12968"/>
              <exon start="11713" stop="11675"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E434308" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAAGAGCCTAGCAATGATCATCGTATGTCACTTGGCAAAGGCTTTAAGGATAGATGAAAATGAAATGAGAGAGCTATTCAGTGATGGTGTGCAGTCAATGAGGATGAATTATTATCCGCCTTGCCCTGAGCCAGACAGGGCAATTGGCTTAAGCCCTCATTCTGATGCTGATGCCCTCACCATCCTTTTCCAGCTCGATGAAACTGAAGGTCTCCAAGTTCGAAAAGACGACATTTGGGTGCCTATAAAGCCCCTCCCAAATGCTTTGATTGTTAATATTGGCGATATGATGGAG : ATATTGAGCAATGGTGTTTATAAGAGCATTGAGCACAGAGCAATTGTAAACTCAAACAAAGAGAGACTCTCTGTTGCAACATTCTCTACCTTCAACCTTGATTCCGAATTAGGACCTGCACATAGCCTCATTGGAACAAATAATCCTCCAATTTTCCGAAGAGTTGTCGTGCAAAAATATTTACAGGACTTTTTTGCACGAAAACTTGACGGAAAATCATACCTTGATGTCATGAAGGTAGAGGTGAGGAATGGAGAATCCTAGGTAGTATTTGATAATATAATTTACTCTTGGCGTTGAAATCTGGACTTCC : CGTGTTTATTTACCCAAAAAAATGACATAAATAATCTCT</gDNA_template>
            <first_frame> Q  E  P  S  N  D  H  R  M  S  L  G  K  G  F  K  D  R  *  K  *  N  E  R  A  I  Q  *  W  C  A  V  N  E  D  E  L  L  S  A  L  P  *  A  R  Q  G  N  W  L  K  P  S  F  *  C  *  C  P  H  H  P  F  P  A  R  *  N  *  R  S  P  S  S  K  R  R  H  L  G  A  Y  K  A  P  P  K  C  F  D  C  *  Y  W  R  Y  D  G   : D  I  E  Q  W  C  L  *  E  H  *  A  Q  S  N  C  K  L  K  Q  R  E  T  L  C  C  N  I  L  Y  L  Q  P  *  F  R  I  R  T  C  T  *  P  H  W  N  K  *  S  S  N  F  P  K  S  C  R  A  K  I  F  T  G  L  F  C  T  K  T  *  R  K  I  I  P  *  C  H  E  G  R  G  E  E  W  R  I  L  G  S  I  *  *  Y  N  L  L  L  A  L  K  S  G  L  P :   V  F  I  Y  P  K  K  *  H  K  *  S   </first_frame>
            <second_frame>  K  S  L  A  M  I  I  V  C  H  L  A  K  A  L  R  I  D  E  N  E  M  R  E  L  F  S  D  G  V  Q  S  M  R  M  N  Y  Y  P  P  C  P  E  P  D  R  A  I  G  L  S  P  H  S  D  A  D  A  L  T  I  L  F  Q  L  D  E  T  E  G  L  Q  V  R  K  D  D  I  W  V  P  I  K  P  L  P  N  A  L  I  V  N  I  G  D  M  M  E  :  I  L  S  N  G  V  Y  K  S  I  E  H  R  A  I  V  N  S  N  K  E  R  L  S  V  A  T  F  S  T  F  N  L  D  S  E  L  G  P  A  H  S  L  I  G  T  N  N  P  P  I  F  R  R  V  V  V  Q  K  Y  L  Q  D  F  F  A  R  K  L  D  G  K  S  Y  L  D  V  M  K  V  E  V  R  N  G  E  S  *  V  V  F  D  N  I  I  Y  S  W  R  *  N  L  D  F   : P  C  L  F  T  Q  K  N  D  I  N  N  L  </second_frame>
            <third_frame>   R  A  *  Q  *  S  S  Y  V  T  W  Q  R  L  *  G  *  M  K  M  K  *  E  S  Y  S  V  M  V  C  S  Q  *  G  *  I  I  I  R  L  A  L  S  Q  T  G  Q  L  A  *  A  L  I  L  M  L  M  P  S  P  S  F  S  S  S  M  K  L  K  V  S  K  F  E  K  T  T  F  G  C  L  *  S  P  S  Q  M  L  *  L  L  I  L  A  I  *  W  R :   Y  *  A  M  V  F  I  R  A  L  S  T  E  Q  L  *  T  Q  T  K  R  D  S  L  L  Q  H  S  L  P  S  T  L  I  P  N  *  D  L  H  I  A  S  L  E  Q  I  I  L  Q  F  S  E  E  L  S  C  K  N  I  Y  R  T  F  L  H  E  N  L  T  E  N  H  T  L  M  S  *  R  *  R  *  G  M  E  N  P  R  *  Y  L  I  I  *  F  T  L  G  V  E  I  W  T  S  :  R  V  Y  L  P  K  K  M  T  *  I  I  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0212P19.2" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="13695" stop="13402"/>
                    <exon start="13280" stop="13017"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>555</number_coding_nucleotides>
                  <number_encoded_amino_acids>185</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KSLAMIIVCHLAKALRIDENEMRELFSDGVQSMRMNYYPPCPEPDRAIGLSPHSDADALTILFQLDETEGLQVRKDDIWVPIKPLPNALIVNIGDMMEILSNGVYKSIEHRAIVNSNKERLSVATFSTFNLDSELGPAHSLIGTNNPPIFRRVVVQKYLQDFFARKLDGKSYLDVMKVEVRNGES*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="14555" PGL_stop="13992"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="14555" e_stop="14203"/>
            <exon e_start="14109" e_stop="13992"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.994" acc_prob="0.966" e_score="0.955"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.955">
            <gDNA_exon_boundary e_start="14555" e_stop="14203" e_length="353"/>
          </exon>
          <intron i_serial="1" don_prob="0.994" acc_prob="0.966">
            <gDNA_intron_boundary i_start="14202" i_stop="14110" i_length="93"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="14109" e_stop="13992" e_length="118"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14555" stop="14203"/>
              <exon start="14109" stop="13992"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E247762" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGAAATAGATAAACCCAAAGGTGAATGGGATCTATAGTTTGAAGGAGTCATTGTATCTATATCTCTGCTATTCTTTTCCATCAGACGTTAATAATTTTCAATTTAATTACTAACAAAGAGTGACGACGGTGGCAAAAATGAACTTTGGAAAATCTCTGTTAGTTCCTAGTGTTCAAGAGCTTGCCAAACAGCATCTAACCAATATTCCGGCCAGGTATGTCCGCCCAGAAGAAGAATCTCCGGTCATATATGCCGGAGCATCGGTCCCAGTTATCGATCTTCAAAAGTTGATTTCCATGGATTCTGAGCTGCAAAAGCTTCACTCGGCTTGCCAACAATGGGGTTTCCTCCAG : GTTATAAACCATGGAGTGACATCTTCGTTGTTGGAGGATTTCAAGAGAGAGGTTATTGATTTGTTCAAACTTCCAATGGAAGAAAAGAAGAAACTATGGCAACAGGAAGACAGCTTTG</gDNA_template>
            <first_frame> R  N  R  *  T  Q  R  *  M  G  S  I  V  *  R  S  H  C  I  Y  I  S  A  I  L  F  H  Q  T  L  I  I  F  N  L  I  T  N  K  E  *  R  R  W  Q  K  *  T  L  E  N  L  C  *  F  L  V  F  K  S  L  P  N  S  I  *  P  I  F  R  P  G  M  S  A  Q  K  K  N  L  R  S  Y  M  P  E  H  R  S  Q  L  S  I  F  K  S  *  F  P  W  I  L  S  C  K  S  F  T  R  L  A  N  N  G  V  S  S  R :   L  *  T  M  E  *  H  L  R  C  W  R  I  S  R  E  R  L  L  I  C  S  N  F  Q  W  K  K  R  R  N  Y  G  N  R  K  T  A  L </first_frame>
            <second_frame>  E  I  D  K  P  K  G  E  W  D  L  *  F  E  G  V  I  V  S  I  S  L  L  F  F  S  I  R  R  *  *  F  S  I  *  L  L  T  K  S  D  D  G  G  K  N  E  L  W  K  I  S  V  S  S  *  C  S  R  A  C  Q  T  A  S  N  Q  Y  S  G  Q  V  C  P  P  R  R  R  I  S  G  H  I  C  R  S  I  G  P  S  Y  R  S  S  K  V  D  F  H  G  F  *  A  A  K  A  S  L  G  L  P  T  M  G  F  P  P   : G  Y  K  P  W  S  D  I  F  V  V  G  G  F  Q  E  R  G  Y  *  F  V  Q  T  S  N  G  R  K  E  E  T  M  A  T  G  R  Q  L   </second_frame>
            <third_frame>   K  *  I  N  P  K  V  N  G  I  Y  S  L  K  E  S  L  Y  L  Y  L  C  Y  S  F  P  S  D  V  N  N  F  Q  F  N  Y  *  Q  R  V  T  T  V  A  K  M  N  F  G  K  S  L  L  V  P  S  V  Q  E  L  A  K  Q  H  L  T  N  I  P  A  R  Y  V  R  P  E  E  E  S  P  V  I  Y  A  G  A  S  V  P  V  I  D  L  Q  K  L  I  S  M  D  S  E  L  Q  K  L  H  S  A  C  Q  Q  W  G  F  L  Q  :  V  I  N  H  G  V  T  S  S  L  L  E  D  F  K  R  E  V  I  D  L  F  K  L  P  M  E  E  K  K  K  L  W  Q  Q  E  D  S  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0212P19.2" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="14442" stop="14203"/>
                    <exon start="14109" stop="13993"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>357</number_coding_nucleotides>
                  <number_encoded_amino_acids>119</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QRVTTVAKMNFGKSLLVPSVQELAKQHLTNIPARYVRPEEESPVIYAGASVPVIDLQKLISMDSELQKLHSACQQWGFLQVINHGVTSSLLEDFKREVIDLFKLPMEEKKKLWQQEDSF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="19859" PGL_stop="18283"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="19859" e_stop="19557"/>
            <exon e_start="18943" e_stop="18696"/>
            <exon e_start="18487" e_stop="18283"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.965" acc_prob="0.990" e_score="0.997"/>
          <exon-intron don_prob="0.991" acc_prob="1.000" e_score="0.996"/>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="19859" e_stop="19557" e_length="303"/>
          </exon>
          <intron i_serial="1" don_prob="0.965" acc_prob="0.990">
            <gDNA_intron_boundary i_start="19556" i_stop="18944" i_length="613"/>
          </intron>
          <exon e_serial="2" e_score="0.996">
            <gDNA_exon_boundary e_start="18943" e_stop="18696" e_length="248"/>
          </exon>
          <intron i_serial="2" don_prob="0.991" acc_prob="1.000">
            <gDNA_intron_boundary i_start="18695" i_stop="18488" i_length="208"/>
          </intron>
          <exon e_serial="3" e_score="0.995">
            <gDNA_exon_boundary e_start="18487" e_stop="18283" e_length="205"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19859" stop="19557"/>
              <exon start="18943" stop="18696"/>
              <exon start="18487" stop="18468"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319740" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19791" stop="19557"/>
              <exon start="18943" stop="18696"/>
              <exon start="18487" stop="18283"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E395848" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19790" stop="19557"/>
              <exon start="18943" stop="18696"/>
              <exon start="18487" stop="18462"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E207227" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19790" stop="19557"/>
              <exon start="18943" stop="18751"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E208253" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGATTAAAAACCCAAACCCGAATTTGATAGAAATTTTCAAGTTTGTAACAAGAGCCAATGGATTCAACCCCGGAAAAATTGAACTTTGGAAAATCTCTGTTAGTTCCAAGTGTTCAAGAGCTTGCCAAACAGCACCTAACCATTATCCCAGACAGGTATCTCCGGCCAGAGCAAGAAACTCCGGTCATTTCCGCCGGAGCGGAGGTTCCAGTTATCGATGTTCAAAAGTTGATTTCAGGTGATTCCATGGATTCTGAGCTGCAAAAGCTTCACTCTGCTTGCCAACAATGGGGTTTCCTACAG : GTTATAAACCATGGGGTGACACCTTTGCTCTTGGAGGACTTCAAGAGAGAGGTTATTGAATTGTTCAAACTTCCAATGGAAGAAAAGAAGAAGCTATGGAAACAGGAAGACAGCTTGGAAGGTTTCGGGCATGCATTCGTTGTGTCTGAAGATCAGAAACTTGATTGGAGTGACAGGTTTGGCATACTGACTCTTCCTCCTCATATCCGCAAAGTGGATTTGTTTCAGAAGTTGCCCTCGAAGCTCAG : GGATATCATGGAAGCATACTGCAAAGAAATTAAGAGCCTAGCAACGAGCATTATATGTCAATTGGCAAAGGCTTTAAGGATGGACGAAGAGGAAATGAGAGATCTATTCAATGATGGTATGCAGACGCTGAGGATGAATTATTATCCGCCTTGCCCTGAGCCAGACAAGGCAATTGGCATAAGCCCTCATTCTGATGCCGATGCC</gDNA_template>
            <first_frame> *  L  K  T  Q  T  R  I  *  *  K  F  S  S  L  *  Q  E  P  M  D  S  T  P  E  K  L  N  F  G  K  S  L  L  V  P  S  V  Q  E  L  A  K  Q  H  L  T  I  I  P  D  R  Y  L  R  P  E  Q  E  T  P  V  I  S  A  G  A  E  V  P  V  I  D  V  Q  K  L  I  S  G  D  S  M  D  S  E  L  Q  K  L  H  S  A  C  Q  Q  W  G  F  L  Q  :  V  I  N  H  G  V  T  P  L  L  L  E  D  F  K  R  E  V  I  E  L  F  K  L  P  M  E  E  K  K  K  L  W  K  Q  E  D  S  L  E  G  F  G  H  A  F  V  V  S  E  D  Q  K  L  D  W  S  D  R  F  G  I  L  T  L  P  P  H  I  R  K  V  D  L  F  Q  K  L  P  S  K  L  R :   D  I  M  E  A  Y  C  K  E  I  K  S  L  A  T  S  I  I  C  Q  L  A  K  A  L  R  M  D  E  E  E  M  R  D  L  F  N  D  G  M  Q  T  L  R  M  N  Y  Y  P  P  C  P  E  P  D  K  A  I  G  I  S  P  H  S  D  A  D  A </first_frame>
            <second_frame>  D  *  K  P  K  P  E  F  D  R  N  F  Q  V  C  N  K  S  Q  W  I  Q  P  R  K  N  *  T  L  E  N  L  C  *  F  Q  V  F  K  S  L  P  N  S  T  *  P  L  S  Q  T  G  I  S  G  Q  S  K  K  L  R  S  F  P  P  E  R  R  F  Q  L  S  M  F  K  S  *  F  Q  V  I  P  W  I  L  S  C  K  S  F  T  L  L  A  N  N  G  V  S  Y  R :   L  *  T  M  G  *  H  L  C  S  W  R  T  S  R  E  R  L  L  N  C  S  N  F  Q  W  K  K  R  R  S  Y  G  N  R  K  T  A  W  K  V  S  G  M  H  S  L  C  L  K  I  R  N  L  I  G  V  T  G  L  A  Y  *  L  F  L  L  I  S  A  K  W  I  C  F  R  S  C  P  R  S  S   : G  I  S  W  K  H  T  A  K  K  L  R  A  *  Q  R  A  L  Y  V  N  W  Q  R  L  *  G  W  T  K  R  K  *  E  I  Y  S  M  M  V  C  R  R  *  G  *  I  I  I  R  L  A  L  S  Q  T  R  Q  L  A  *  A  L  I  L  M  P  M   </second_frame>
            <third_frame>   I  K  N  P  N  P  N  L  I  E  I  F  K  F  V  T  R  A  N  G  F  N  P  G  K  I  E  L  W  K  I  S  V  S  S  K  C  S  R  A  C  Q  T  A  P  N  H  Y  P  R  Q  V  S  P  A  R  A  R  N  S  G  H  F  R  R  S  G  G  S  S  Y  R  C  S  K  V  D  F  R  *  F  H  G  F  *  A  A  K  A  S  L  C  L  P  T  M  G  F  P  T   : G  Y  K  P  W  G  D  T  F  A  L  G  G  L  Q  E  R  G  Y  *  I  V  Q  T  S  N  G  R  K  E  E  A  M  E  T  G  R  Q  L  G  R  F  R  A  C  I  R  C  V  *  R  S  E  T  *  L  E  *  Q  V  W  H  T  D  S  S  S  S  Y  P  Q  S  G  F  V  S  E  V  A  L  E  A  Q  :  G  Y  H  G  S  I  L  Q  R  N  *  E  P  S  N  E  H  Y  M  S  I  G  K  G  F  K  D  G  R  R  G  N  E  R  S  I  Q  *  W  Y  A  D  A  E  D  E  L  L  S  A  L  P  *  A  R  Q  G  N  W  H  K  P  S  F  *  C  R  C  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0212P19.2" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="19811" stop="19557"/>
                    <exon start="18943" stop="18696"/>
                    <exon start="18487" stop="18283"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>708</number_coding_nucleotides>
                  <number_encoded_amino_acids>236</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QEPMDSTPEKLNFGKSLLVPSVQELAKQHLTIIPDRYLRPEQETPVISAGAEVPVIDVQKLISGDSMDSELQKLHSACQQWGFLQVINHGVTPLLLEDFKREVIELFKLPMEEKKKLWKQEDSLEGFGHAFVVSEDQKLDWSDRFGILTLPPHIRKVDLFQKLPSKLRDIMEAYCKEIKSLATSIICQLAKALRMDEEEMRDLFNDGMQTLRMNYYPPCPEPDKAIGISPHSDADA</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="-" PGL_start="24475" PGL_stop="22511"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="24475" e_stop="24201"/>
            <exon e_start="24081" e_stop="23834"/>
            <exon e_start="23573" e_stop="23249"/>
            <exon e_start="23041" e_stop="22511"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.977" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.976" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.989"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="24475" e_stop="24201" e_length="275"/>
          </exon>
          <intron i_serial="1" don_prob="0.977" acc_prob="0.993">
            <gDNA_intron_boundary i_start="24200" i_stop="24082" i_length="119"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="24081" e_stop="23834" e_length="248"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="23833" i_stop="23574" i_length="260"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="23573" e_stop="23249" e_length="325"/>
          </exon>
          <intron i_serial="3" don_prob="0.976" acc_prob="0.999">
            <gDNA_intron_boundary i_start="23248" i_stop="23042" i_length="207"/>
          </intron>
          <exon e_serial="4" e_score="0.989">
            <gDNA_exon_boundary e_start="23041" e_stop="22511" e_length="531"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24475" stop="24201"/>
              <exon start="24081" stop="23928"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303084" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24469" stop="24201"/>
              <exon start="24081" stop="23892"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277411" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24468" stop="24201"/>
              <exon start="24081" stop="23834"/>
              <exon start="23573" stop="23516"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267646" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24450" stop="24201"/>
              <exon start="24081" stop="23897"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E201437" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24411" stop="24201"/>
              <exon start="24081" stop="23863"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E204474" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24408" stop="24201"/>
              <exon start="24081" stop="24016"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E206358" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24405" stop="24201"/>
              <exon start="24081" stop="23834"/>
              <exon start="23573" stop="23356"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E434307" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23925" stop="23834"/>
              <exon start="23573" stop="23249"/>
              <exon start="23041" stop="22782"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296135" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23925" stop="23834"/>
              <exon start="23573" stop="23249"/>
              <exon start="23041" stop="22973"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290167" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23464" stop="23249"/>
              <exon start="23041" stop="22608"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308962" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23414" stop="23249"/>
              <exon start="23041" stop="22511"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E395442" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTATTTTTTCAAGTTTGCAAGAAGAGCAAATGGAGTCAACGCCGGAAAAATTGAACTTTGGAAATTCTCTGTTAGTACCAAGTGTTCAAGAGCTTGCCAAACAGCACCTAACCAATATTCCGGACAGGTATGTCCGCCCACAACAAGAATCTCTGGTCGTATCTTCCGGAGCATCAGTTCCAGTTATCGATCTTCAAAAGTTGATTTCAGGGAATACCATAGATTCTGAGCTACAAAAGCTTCACTCTGCTTGCCAAGAATGGGGTTTCCTACAG : GTTGTAAACCATGGAGTGACACCTTCGTTACTGGAGGACTTCAAGAGAGAGGTTATTCAATTGTTCAAACTTCCAATGGAAGAAAAGAAGAAACTGTGGCAACAGAAAGACAGCTTTGAAGGTTTCGGGCATATGTTTGTTGTATCGGAGGAGCAGAAGCTTGATTGGAGTGACATGTTTGGCATAATAAATCTTCCTCCTCATATCCGCAAAGTGGACTTGTTTCAGAAGTTGCCCTCGAAGCTCAG : AGACATCATGGAAGCATATTCCAAAGAAATCAAGAACCTAACAATGATCATCGTATGTCAATTGGCCAAGGCTTTAAGGATGGATGAAAAAGAAATGCGAGATCTATTCAGTGATGGTATGCAGTCAATAAGGATGAATTATTATCCCCCTTGTCCTGAGCCAGACAGGGCAATTGGCTTAAGCCCTCATTCTGATGCAGATGCCCTCACCATCCTCTTCCAGCTCAATGAAACTGAAGGTCTCCAAGTCCGAAAAGACGATATTTGGGTGCCTATAACGCCCCTCCCAAATGCTTTGATTGTCAATATTGGCGATATGATGGAG : ATAGTGAGCAATGGTGTCTATAGGAGCATTGAGCATAGAGCAATTGTAAACTCATATGAAGAACGTCTCTCTGTTGCAACATTCTACAACATCAACCTTGAGTCCGAGTTAGGACCTGCACACAGCCTTATTGGACCACATAATCCTCCCATTTTCCGAAGAGTTCCTGTGCAAAAATATTTACAGGACTTTTTTGCACGAAAACTTGATGGAAAATCGTATCTTGATTCCATGAAGGTCGACGCGAGGGATGATGAATCATAGGTAGAATCTGATATATGTCTGTCTTGTTGTTGTAATTTGGAGTTCCCCTGTTTTCTATTTGTTAGCTGTATTGACGTGAAGCAAATATTAATATGTGGATTGCTTTAGACACTATATTTTTGGGTTGAGAGGAATTTCCATGAATTTATTTTAGAGGAAAATACACGACTATCCCCTAAAAGTTGCAGTGAAGTCGGATCGTACTAGAGATAAAATTATTTTTAAAAAATAGTAAAGTTAATTTTTTTTCTCGATAAAAACAGAATG</gDNA_template>
            <first_frame> L  F  F  Q  V  C  K  K  S  K  W  S  Q  R  R  K  N  *  T  L  E  I  L  C  *  Y  Q  V  F  K  S  L  P  N  S  T  *  P  I  F  R  T  G  M  S  A  H  N  K  N  L  W  S  Y  L  P  E  H  Q  F  Q  L  S  I  F  K  S  *  F  Q  G  I  P  *  I  L  S  Y  K  S  F  T  L  L  A  K  N  G  V  S  Y  R :   L  *  T  M  E  *  H  L  R  Y  W  R  T  S  R  E  R  L  F  N  C  S  N  F  Q  W  K  K  R  R  N  C  G  N  R  K  T  A  L  K  V  S  G  I  C  L  L  Y  R  R  S  R  S  L  I  G  V  T  C  L  A  *  *  I  F  L  L  I  S  A  K  W  T  C  F  R  S  C  P  R  S  S   : E  T  S  W  K  H  I  P  K  K  S  R  T  *  Q  *  S  S  Y  V  N  W  P  R  L  *  G  W  M  K  K  K  C  E  I  Y  S  V  M  V  C  S  Q  *  G  *  I  I  I  P  L  V  L  S  Q  T  G  Q  L  A  *  A  L  I  L  M  Q  M  P  S  P  S  S  S  S  S  M  K  L  K  V  S  K  S  E  K  T  I  F  G  C  L  *  R  P  S  Q  M  L  *  L  S  I  L  A  I  *  W  R :   *  *  A  M  V  S  I  G  A  L  S  I  E  Q  L  *  T  H  M  K  N  V  S  L  L  Q  H  S  T  T  S  T  L  S  P  S  *  D  L  H  T  A  L  L  D  H  I  I  L  P  F  S  E  E  F  L  C  K  N  I  Y  R  T  F  L  H  E  N  L  M  E  N  R  I  L  I  P  *  R  S  T  R  G  M  M  N  H  R  *  N  L  I  Y  V  C  L  V  V  V  I  W  S  S  P  V  F  Y  L  L  A  V  L  T  *  S  K  Y  *  Y  V  D  C  F  R  H  Y  I  F  G  L  R  G  I  S  M  N  L  F  *  R  K  I  H  D  Y  P  L  K  V  A  V  K  S  D  R  T  R  D  K  I  I  F  K  K  *  *  S  *  F  F  F  S  I  K  T  E   </first_frame>
            <second_frame>  Y  F  F  K  F  A  R  R  A  N  G  V  N  A  G  K  I  E  L  W  K  F  S  V  S  T  K  C  S  R  A  C  Q  T  A  P  N  Q  Y  S  G  Q  V  C  P  P  T  T  R  I  S  G  R  I  F  R  S  I  S  S  S  Y  R  S  S  K  V  D  F  R  E  Y  H  R  F  *  A  T  K  A  S  L  C  L  P  R  M  G  F  P  T   : G  C  K  P  W  S  D  T  F  V  T  G  G  L  Q  E  R  G  Y  S  I  V  Q  T  S  N  G  R  K  E  E  T  V  A  T  E  R  Q  L  *  R  F  R  A  Y  V  C  C  I  G  G  A  E  A  *  L  E  *  H  V  W  H  N  K  S  S  S  S  Y  P  Q  S  G  L  V  S  E  V  A  L  E  A  Q  :  R  H  H  G  S  I  F  Q  R  N  Q  E  P  N  N  D  H  R  M  S  I  G  Q  G  F  K  D  G  *  K  R  N  A  R  S  I  Q  *  W  Y  A  V  N  K  D  E  L  L  S  P  L  S  *  A  R  Q  G  N  W  L  K  P  S  F  *  C  R  C  P  H  H  P  L  P  A  Q  *  N  *  R  S  P  S  P  K  R  R  Y  L  G  A  Y  N  A  P  P  K  C  F  D  C  Q  Y  W  R  Y  D  G   : D  S  E  Q  W  C  L  *  E  H  *  A  *  S  N  C  K  L  I  *  R  T  S  L  C  C  N  I  L  Q  H  Q  P  *  V  R  V  R  T  C  T  Q  P  Y  W  T  T  *  S  S  H  F  P  K  S  S  C  A  K  I  F  T  G  L  F  C  T  K  T  *  W  K  I  V  S  *  F  H  E  G  R  R  E  G  *  *  I  I  G  R  I  *  Y  M  S  V  L  L  L  *  F  G  V  P  L  F  S  I  C  *  L  Y  *  R  E  A  N  I  N  M  W  I  A  L  D  T  I  F  L  G  *  E  E  F  P  *  I  Y  F  R  G  K  Y  T  T  I  P  *  K  L  Q  *  S  R  I  V  L  E  I  K  L  F  L  K  N  S  K  V  N  F  F  S  R  *  K  Q  N  </second_frame>
            <third_frame>   I  F  S  S  L  Q  E  E  Q  M  E  S  T  P  E  K  L  N  F  G  N  S  L  L  V  P  S  V  Q  E  L  A  K  Q  H  L  T  N  I  P  D  R  Y  V  R  P  Q  Q  E  S  L  V  V  S  S  G  A  S  V  P  V  I  D  L  Q  K  L  I  S  G  N  T  I  D  S  E  L  Q  K  L  H  S  A  C  Q  E  W  G  F  L  Q  :  V  V  N  H  G  V  T  P  S  L  L  E  D  F  K  R  E  V  I  Q  L  F  K  L  P  M  E  E  K  K  K  L  W  Q  Q  K  D  S  F  E  G  F  G  H  M  F  V  V  S  E  E  Q  K  L  D  W  S  D  M  F  G  I  I  N  L  P  P  H  I  R  K  V  D  L  F  Q  K  L  P  S  K  L  R :   D  I  M  E  A  Y  S  K  E  I  K  N  L  T  M  I  I  V  C  Q  L  A  K  A  L  R  M  D  E  K  E  M  R  D  L  F  S  D  G  M  Q  S  I  R  M  N  Y  Y  P  P  C  P  E  P  D  R  A  I  G  L  S  P  H  S  D  A  D  A  L  T  I  L  F  Q  L  N  E  T  E  G  L  Q  V  R  K  D  D  I  W  V  P  I  T  P  L  P  N  A  L  I  V  N  I  G  D  M  M  E  :  I  V  S  N  G  V  Y  R  S  I  E  H  R  A  I  V  N  S  Y  E  E  R  L  S  V  A  T  F  Y  N  I  N  L  E  S  E  L  G  P  A  H  S  L  I  G  P  H  N  P  P  I  F  R  R  V  P  V  Q  K  Y  L  Q  D  F  F  A  R  K  L  D  G  K  S  Y  L  D  S  M  K  V  D  A  R  D  D  E  S  *  V  E  S  D  I  C  L  S  C  C  C  N  L  E  F  P  C  F  L  F  V  S  C  I  D  V  K  Q  I  L  I  C  G  L  L  *  T  L  Y  F  W  V  E  R  N  F  H  E  F  I  L  E  E  N  T  R  L  S  P  K  S  C  S  E  V  G  S  Y  *  R  *  N  Y  F  *  K  I  V  K  L  I  F  F  L  D  K  N  R  M </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0212P19.2" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="24473" stop="24201"/>
                    <exon start="24081" stop="23834"/>
                    <exon start="23573" stop="23249"/>
                    <exon start="23041" stop="22778"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1107</number_coding_nucleotides>
                  <number_encoded_amino_acids>369</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IFSSLQEEQMESTPEKLNFGNSLLVPSVQELAKQHLTNIPDRYVRPQQESLVVSSGASVPVIDLQKLISGNTIDSELQKLHSACQEWGFLQVVNHGVTPSLLEDFKREVIQLFKLPMEEKKKLWQQKDSFEGFGHMFVVSEEQKLDWSDMFGIINLPPHIRKVDLFQKLPSKLRDIMEAYSKEIKNLTMIIVCQLAKALRMDEKEMRDLFSDGMQSIRMNYYPPCPEPDRAIGLSPHSDADALTILFQLNETEGLQVRKDDIWVPITPLPNALIVNIGDMMEIVSNGVYRSIEHRAIVNSYEERLSVATFYNINLESELGPAHSLIGPHNPPIFRRVPVQKYLQDFFARKLDGKSYLDSMKVDARDDES*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="24475" e_stop="24201"/>
            <exon e_start="24081" e_stop="23834"/>
            <exon e_start="23573" e_stop="23249"/>
            <exon e_start="23041" e_stop="22711"/>
            <exon e_start="22623" e_stop="22604"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.977" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.976" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.875" e_score="0.903"/>
          <exon-only e_score="0.650"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="24475" e_stop="24201" e_length="275"/>
          </exon>
          <intron i_serial="1" don_prob="0.977" acc_prob="0.993">
            <gDNA_intron_boundary i_start="24200" i_stop="24082" i_length="119"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="24081" e_stop="23834" e_length="248"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="23833" i_stop="23574" i_length="260"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="23573" e_stop="23249" e_length="325"/>
          </exon>
          <intron i_serial="3" don_prob="0.976" acc_prob="0.999">
            <gDNA_intron_boundary i_start="23248" i_stop="23042" i_length="207"/>
          </intron>
          <exon e_serial="4" e_score="0.903">
            <gDNA_exon_boundary e_start="23041" e_stop="22711" e_length="331"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.875">
            <gDNA_intron_boundary i_start="22710" i_stop="22624" i_length="87"/>
          </intron>
          <exon e_serial="5" e_score="0.650">
            <gDNA_exon_boundary e_start="22623" e_stop="22604" e_length="20"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24475" stop="24201"/>
              <exon start="24081" stop="23928"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303084" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24469" stop="24201"/>
              <exon start="24081" stop="23892"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277411" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24468" stop="24201"/>
              <exon start="24081" stop="23834"/>
              <exon start="23573" stop="23516"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267646" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24450" stop="24201"/>
              <exon start="24081" stop="23897"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E201437" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24411" stop="24201"/>
              <exon start="24081" stop="23863"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E204474" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24408" stop="24201"/>
              <exon start="24081" stop="24016"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E206358" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24405" stop="24201"/>
              <exon start="24081" stop="23834"/>
              <exon start="23573" stop="23356"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E434307" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23925" stop="23834"/>
              <exon start="23573" stop="23249"/>
              <exon start="23041" stop="22782"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296135" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23925" stop="23834"/>
              <exon start="23573" stop="23249"/>
              <exon start="23041" stop="22973"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290167" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23521" stop="23249"/>
              <exon start="23041" stop="22711"/>
              <exon start="22623" stop="22604"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E575245" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTATTTTTTCAAGTTTGCAAGAAGAGCAAATGGAGTCAACGCCGGAAAAATTGAACTTTGGAAATTCTCTGTTAGTACCAAGTGTTCAAGAGCTTGCCAAACAGCACCTAACCAATATTCCGGACAGGTATGTCCGCCCACAACAAGAATCTCTGGTCGTATCTTCCGGAGCATCAGTTCCAGTTATCGATCTTCAAAAGTTGATTTCAGGGAATACCATAGATTCTGAGCTACAAAAGCTTCACTCTGCTTGCCAAGAATGGGGTTTCCTACAG : GTTGTAAACCATGGAGTGACACCTTCGTTACTGGAGGACTTCAAGAGAGAGGTTATTCAATTGTTCAAACTTCCAATGGAAGAAAAGAAGAAACTGTGGCAACAGAAAGACAGCTTTGAAGGTTTCGGGCATATGTTTGTTGTATCGGAGGAGCAGAAGCTTGATTGGAGTGACATGTTTGGCATAATAAATCTTCCTCCTCATATCCGCAAAGTGGACTTGTTTCAGAAGTTGCCCTCGAAGCTCAG : AGACATCATGGAAGCATATTCCAAAGAAATCAAGAACCTAACAATGATCATCGTATGTCAATTGGCCAAGGCTTTAAGGATGGATGAAAAAGAAATGCGAGATCTATTCAGTGATGGTATGCAGTCAATAAGGATGAATTATTATCCCCCTTGTCCTGAGCCAGACAGGGCAATTGGCTTAAGCCCTCATTCTGATGCAGATGCCCTCACCATCCTCTTCCAGCTCAATGAAACTGAAGGTCTCCAAGTCCGAAAAGACGATATTTGGGTGCCTATAACGCCCCTCCCAAATGCTTTGATTGTCAATATTGGCGATATGATGGAG : ATAGTGAGCAATGGTGTCTATAGGAGCATTGAGCATAGAGCAATTGTAAACTCATATGAAGAACGTCTCTCTGTTGCAACATTCTACAACATCAACCTTGAGTCCGAGTTAGGACCTGCACACAGCCTTATTGGACCACATAATCCTCCCATTTTCCGAAGAGTTCCTGTGCAAAAATATTTACAGGACTTTTTTGCACGAAAACTTGATGGAAAATCGTATCTTGATTCCATGAAGGTCGACGCGAGGGATGATGAATCATAGGTAGAATCTGATATATGTCTGTCTTGTTGTTGTAATTTGGAGTTCCCCTGTTTTCTATTTGTTAGCT : AGGAAAATACACGACTATCC</gDNA_template>
            <first_frame> L  F  F  Q  V  C  K  K  S  K  W  S  Q  R  R  K  N  *  T  L  E  I  L  C  *  Y  Q  V  F  K  S  L  P  N  S  T  *  P  I  F  R  T  G  M  S  A  H  N  K  N  L  W  S  Y  L  P  E  H  Q  F  Q  L  S  I  F  K  S  *  F  Q  G  I  P  *  I  L  S  Y  K  S  F  T  L  L  A  K  N  G  V  S  Y  R :   L  *  T  M  E  *  H  L  R  Y  W  R  T  S  R  E  R  L  F  N  C  S  N  F  Q  W  K  K  R  R  N  C  G  N  R  K  T  A  L  K  V  S  G  I  C  L  L  Y  R  R  S  R  S  L  I  G  V  T  C  L  A  *  *  I  F  L  L  I  S  A  K  W  T  C  F  R  S  C  P  R  S  S   : E  T  S  W  K  H  I  P  K  K  S  R  T  *  Q  *  S  S  Y  V  N  W  P  R  L  *  G  W  M  K  K  K  C  E  I  Y  S  V  M  V  C  S  Q  *  G  *  I  I  I  P  L  V  L  S  Q  T  G  Q  L  A  *  A  L  I  L  M  Q  M  P  S  P  S  S  S  S  S  M  K  L  K  V  S  K  S  E  K  T  I  F  G  C  L  *  R  P  S  Q  M  L  *  L  S  I  L  A  I  *  W  R :   *  *  A  M  V  S  I  G  A  L  S  I  E  Q  L  *  T  H  M  K  N  V  S  L  L  Q  H  S  T  T  S  T  L  S  P  S  *  D  L  H  T  A  L  L  D  H  I  I  L  P  F  S  E  E  F  L  C  K  N  I  Y  R  T  F  L  H  E  N  L  M  E  N  R  I  L  I  P  *  R  S  T  R  G  M  M  N  H  R  *  N  L  I  Y  V  C  L  V  V  V  I  W  S  S  P  V  F  Y  L  L  A  :  R  K  I  H  D  Y   </first_frame>
            <second_frame>  Y  F  F  K  F  A  R  R  A  N  G  V  N  A  G  K  I  E  L  W  K  F  S  V  S  T  K  C  S  R  A  C  Q  T  A  P  N  Q  Y  S  G  Q  V  C  P  P  T  T  R  I  S  G  R  I  F  R  S  I  S  S  S  Y  R  S  S  K  V  D  F  R  E  Y  H  R  F  *  A  T  K  A  S  L  C  L  P  R  M  G  F  P  T   : G  C  K  P  W  S  D  T  F  V  T  G  G  L  Q  E  R  G  Y  S  I  V  Q  T  S  N  G  R  K  E  E  T  V  A  T  E  R  Q  L  *  R  F  R  A  Y  V  C  C  I  G  G  A  E  A  *  L  E  *  H  V  W  H  N  K  S  S  S  S  Y  P  Q  S  G  L  V  S  E  V  A  L  E  A  Q  :  R  H  H  G  S  I  F  Q  R  N  Q  E  P  N  N  D  H  R  M  S  I  G  Q  G  F  K  D  G  *  K  R  N  A  R  S  I  Q  *  W  Y  A  V  N  K  D  E  L  L  S  P  L  S  *  A  R  Q  G  N  W  L  K  P  S  F  *  C  R  C  P  H  H  P  L  P  A  Q  *  N  *  R  S  P  S  P  K  R  R  Y  L  G  A  Y  N  A  P  P  K  C  F  D  C  Q  Y  W  R  Y  D  G   : D  S  E  Q  W  C  L  *  E  H  *  A  *  S  N  C  K  L  I  *  R  T  S  L  C  C  N  I  L  Q  H  Q  P  *  V  R  V  R  T  C  T  Q  P  Y  W  T  T  *  S  S  H  F  P  K  S  S  C  A  K  I  F  T  G  L  F  C  T  K  T  *  W  K  I  V  S  *  F  H  E  G  R  R  E  G  *  *  I  I  G  R  I  *  Y  M  S  V  L  L  L  *  F  G  V  P  L  F  S  I  C  *  L :   G  K  Y  T  T  I  </second_frame>
            <third_frame>   I  F  S  S  L  Q  E  E  Q  M  E  S  T  P  E  K  L  N  F  G  N  S  L  L  V  P  S  V  Q  E  L  A  K  Q  H  L  T  N  I  P  D  R  Y  V  R  P  Q  Q  E  S  L  V  V  S  S  G  A  S  V  P  V  I  D  L  Q  K  L  I  S  G  N  T  I  D  S  E  L  Q  K  L  H  S  A  C  Q  E  W  G  F  L  Q  :  V  V  N  H  G  V  T  P  S  L  L  E  D  F  K  R  E  V  I  Q  L  F  K  L  P  M  E  E  K  K  K  L  W  Q  Q  K  D  S  F  E  G  F  G  H  M  F  V  V  S  E  E  Q  K  L  D  W  S  D  M  F  G  I  I  N  L  P  P  H  I  R  K  V  D  L  F  Q  K  L  P  S  K  L  R :   D  I  M  E  A  Y  S  K  E  I  K  N  L  T  M  I  I  V  C  Q  L  A  K  A  L  R  M  D  E  K  E  M  R  D  L  F  S  D  G  M  Q  S  I  R  M  N  Y  Y  P  P  C  P  E  P  D  R  A  I  G  L  S  P  H  S  D  A  D  A  L  T  I  L  F  Q  L  N  E  T  E  G  L  Q  V  R  K  D  D  I  W  V  P  I  T  P  L  P  N  A  L  I  V  N  I  G  D  M  M  E  :  I  V  S  N  G  V  Y  R  S  I  E  H  R  A  I  V  N  S  Y  E  E  R  L  S  V  A  T  F  Y  N  I  N  L  E  S  E  L  G  P  A  H  S  L  I  G  P  H  N  P  P  I  F  R  R  V  P  V  Q  K  Y  L  Q  D  F  F  A  R  K  L  D  G  K  S  Y  L  D  S  M  K  V  D  A  R  D  D  E  S  *  V  E  S  D  I  C  L  S  C  C  C  N  L  E  F  P  C  F  L  F  V  S   : *  E  N  T  R  L  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0212P19.2" strand="-"/>
                <serials PGL_serial="7" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="24473" stop="24201"/>
                    <exon start="24081" stop="23834"/>
                    <exon start="23573" stop="23249"/>
                    <exon start="23041" stop="22778"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1107</number_coding_nucleotides>
                  <number_encoded_amino_acids>369</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IFSSLQEEQMESTPEKLNFGNSLLVPSVQELAKQHLTNIPDRYVRPQQESLVVSSGASVPVIDLQKLISGNTIDSELQKLHSACQEWGFLQVVNHGVTPSLLEDFKREVIQLFKLPMEEKKKLWQQKDSFEGFGHMFVVSEEQKLDWSDMFGIINLPPHIRKVDLFQKLPSKLRDIMEAYSKEIKNLTMIIVCQLAKALRMDEKEMRDLFSDGMQSIRMNYYPPCPEPDRAIGLSPHSDADALTILFQLNETEGLQVRKDDIWVPITPLPNALIVNIGDMMEIVSNGVYRSIEHRAIVNSYEERLSVATFYNINLESELGPAHSLIGPHNPPIFRRVPVQKYLQDFFARKLDGKSYLDSMKVDARDDES*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="24475" e_stop="24201"/>
            <exon e_start="24081" e_stop="23637"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.977" acc_prob="0.993" e_score="1.000"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="24475" e_stop="24201" e_length="275"/>
          </exon>
          <intron i_serial="1" don_prob="0.977" acc_prob="0.993">
            <gDNA_intron_boundary i_start="24200" i_stop="24082" i_length="119"/>
          </intron>
          <exon e_serial="2" e_score="0.996">
            <gDNA_exon_boundary e_start="24081" e_stop="23637" e_length="445"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24475" stop="24201"/>
              <exon start="24081" stop="23928"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E303084" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24469" stop="24201"/>
              <exon start="24081" stop="23892"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277411" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24450" stop="24201"/>
              <exon start="24081" stop="23897"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E201437" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24412" stop="24201"/>
              <exon start="24081" stop="23637"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E395443" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24411" stop="24201"/>
              <exon start="24081" stop="23863"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E204474" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24408" stop="24201"/>
              <exon start="24081" stop="24016"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E206358" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTATTTTTTCAAGTTTGCAAGAAGAGCAAATGGAGTCAACGCCGGAAAAATTGAACTTTGGAAATTCTCTGTTAGTACCAAGTGTTCAAGAGCTTGCCAAACAGCACCTAACCAATATTCCGGACAGGTATGTCCGCCCACAACAAGAATCTCTGGTCGTATCTTCCGGAGCATCAGTTCCAGTTATCGATCTTCAAAAGTTGATTTCAGGGAATACCATAGATTCTGAGCTACAAAAGCTTCACTCTGCTTGCCAAGAATGGGGTTTCCTACAG : GTTGTAAACCATGGAGTGACACCTTCGTTACTGGAGGACTTCAAGAGAGAGGTTATTCAATTGTTCAAACTTCCAATGGAAGAAAAGAAGAAACTGTGGCAACAGAAAGACAGCTTTGAAGGTTTCGGGCATATGTTTGTTGTATCGGAGGAGCAGAAGCTTGATTGGAGTGACATGTTTGGCATAATAAATCTTCCTCCTCATATCCGCAAAGTGGACTTGTTTCAGAAGTTGCCCTCGAAGCTCAGGTGGCCATCTCCTTACTCTCTCTCAGCACATGCTTACTCGACGCCCTTACTTGTCTTTCTTTTGTATAAGAAAAGTCAAGAAATCGACTTTGTTCAGTTATCTCTACTAGTTTATGAACTATTTAAGCAGTAAACTACTCTATCCAACGGTATCAACCAATTCTTGAAATTTAAATTCGTCCCACAGACCATTTTGT</gDNA_template>
            <first_frame> L  F  F  Q  V  C  K  K  S  K  W  S  Q  R  R  K  N  *  T  L  E  I  L  C  *  Y  Q  V  F  K  S  L  P  N  S  T  *  P  I  F  R  T  G  M  S  A  H  N  K  N  L  W  S  Y  L  P  E  H  Q  F  Q  L  S  I  F  K  S  *  F  Q  G  I  P  *  I  L  S  Y  K  S  F  T  L  L  A  K  N  G  V  S  Y  R :   L  *  T  M  E  *  H  L  R  Y  W  R  T  S  R  E  R  L  F  N  C  S  N  F  Q  W  K  K  R  R  N  C  G  N  R  K  T  A  L  K  V  S  G  I  C  L  L  Y  R  R  S  R  S  L  I  G  V  T  C  L  A  *  *  I  F  L  L  I  S  A  K  W  T  C  F  R  S  C  P  R  S  S  G  G  H  L  L  T  L  S  Q  H  M  L  T  R  R  P  Y  L  S  F  F  C  I  R  K  V  K  K  S  T  L  F  S  Y  L  Y  *  F  M  N  Y  L  S  S  K  L  L  Y  P  T  V  S  T  N  S  *  N  L  N  S  S  H  R  P  F  C </first_frame>
            <second_frame>  Y  F  F  K  F  A  R  R  A  N  G  V  N  A  G  K  I  E  L  W  K  F  S  V  S  T  K  C  S  R  A  C  Q  T  A  P  N  Q  Y  S  G  Q  V  C  P  P  T  T  R  I  S  G  R  I  F  R  S  I  S  S  S  Y  R  S  S  K  V  D  F  R  E  Y  H  R  F  *  A  T  K  A  S  L  C  L  P  R  M  G  F  P  T   : G  C  K  P  W  S  D  T  F  V  T  G  G  L  Q  E  R  G  Y  S  I  V  Q  T  S  N  G  R  K  E  E  T  V  A  T  E  R  Q  L  *  R  F  R  A  Y  V  C  C  I  G  G  A  E  A  *  L  E  *  H  V  W  H  N  K  S  S  S  S  Y  P  Q  S  G  L  V  S  E  V  A  L  E  A  Q  V  A  I  S  L  L  S  L  S  T  C  L  L  D  A  L  T  C  L  S  F  V  *  E  K  S  R  N  R  L  C  S  V  I  S  T  S  L  *  T  I  *  A  V  N  Y  S  I  Q  R  Y  Q  P  I  L  E  I  *  I  R  P  T  D  H  F   </second_frame>
            <third_frame>   I  F  S  S  L  Q  E  E  Q  M  E  S  T  P  E  K  L  N  F  G  N  S  L  L  V  P  S  V  Q  E  L  A  K  Q  H  L  T  N  I  P  D  R  Y  V  R  P  Q  Q  E  S  L  V  V  S  S  G  A  S  V  P  V  I  D  L  Q  K  L  I  S  G  N  T  I  D  S  E  L  Q  K  L  H  S  A  C  Q  E  W  G  F  L  Q  :  V  V  N  H  G  V  T  P  S  L  L  E  D  F  K  R  E  V  I  Q  L  F  K  L  P  M  E  E  K  K  K  L  W  Q  Q  K  D  S  F  E  G  F  G  H  M  F  V  V  S  E  E  Q  K  L  D  W  S  D  M  F  G  I  I  N  L  P  P  H  I  R  K  V  D  L  F  Q  K  L  P  S  K  L  R  W  P  S  P  Y  S  L  S  A  H  A  Y  S  T  P  L  L  V  F  L  L  Y  K  K  S  Q  E  I  D  F  V  Q  L  S  L  L  V  Y  E  L  F  K  Q  *  T  T  L  S  N  G  I  N  Q  F  L  K  F  K  F  V  P  Q  T  I  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0212P19.2" strand="-"/>
                <serials PGL_serial="7" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="24473" stop="24201"/>
                    <exon start="24081" stop="23701"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>651</number_coding_nucleotides>
                  <number_encoded_amino_acids>217</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IFSSLQEEQMESTPEKLNFGNSLLVPSVQELAKQHLTNIPDRYVRPQQESLVVSSGASVPVIDLQKLISGNTIDSELQKLHSACQEWGFLQVVNHGVTPSLLEDFKREVIQLFKLPMEEKKKLWQQKDSFEGFGHMFVVSEEQKLDWSDMFGIINLPPHIRKVDLFQKLPSKLRWPSPYSLSAHAYSTPLLVFLLYKKSQEIDFVQLSLLVYELFKQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="33866" PGL_stop="33156"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="33866" e_stop="33694"/>
            <exon e_start="33612" e_stop="33365"/>
            <exon e_start="33244" e_stop="33156"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.990" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.959" acc_prob="0.981" e_score="0.992"/>
          <exon-only e_score="0.966"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="33866" e_stop="33694" e_length="173"/>
          </exon>
          <intron i_serial="1" don_prob="0.990" acc_prob="0.998">
            <gDNA_intron_boundary i_start="33693" i_stop="33613" i_length="81"/>
          </intron>
          <exon e_serial="2" e_score="0.992">
            <gDNA_exon_boundary e_start="33612" e_stop="33365" e_length="248"/>
          </exon>
          <intron i_serial="2" don_prob="0.959" acc_prob="0.981">
            <gDNA_intron_boundary i_start="33364" i_stop="33245" i_length="120"/>
          </intron>
          <exon e_serial="3" e_score="0.966">
            <gDNA_exon_boundary e_start="33244" e_stop="33156" e_length="89"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33866" stop="33694"/>
              <exon start="33612" stop="33365"/>
              <exon start="33244" stop="33156"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E203756" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TAGCAGCCATTCCATCGCGATATATTCGTGATGATTTAGAAAAGACATCCTGTTCCATATTAATGCCTCAAGTTCCAGTGATTGATATGGAAAAACTGCTGATAATTGGAGATCATGATACCGCAGAGCTTGAGAGGCTTCATTTTGCTTGCAAAGAATGGGGATTTTTTCAG : GTGGTGAATCATGGGGTGAGTTCATTGTTGTTGGAGAAAGTGAAGTCAGAAATCCGAGCATTTTTCGATCTACCAATGGAAGAGAAGAAGAAGTTTGATCAACAAGAAGGGGACGTTGAAGGATTTGGACAAGCTTTTGTTTTTTCTCAAGAGCAAAAGTTAGATTGGGGTGACTTGTTTTACATGACCACTCTCCCTACTAATTTGAGAAAACCTCATTTATTTCCCAAGCTCCCTCACTCACTTAG : GGAGACCATGGAAGAACATAGCAAGGAATTTAAGAACCTAGCCATAAGGATCTTGTGTCAATTGGCAAAGGTTTTAGGGATGGATGAAA</gDNA_template>
            <first_frame> *  Q  P  F  H  R  D  I  F  V  M  I  *  K  R  H  P  V  P  Y  *  C  L  K  F  Q  *  L  I  W  K  N  C  *  *  L  E  I  M  I  P  Q  S  L  R  G  F  I  L  L  A  K  N  G  D  F  F  R :   W  *  I  M  G  *  V  H  C  C  W  R  K  *  S  Q  K  S  E  H  F  S  I  Y  Q  W  K  R  R  R  S  L  I  N  K  K  G  T  L  K  D  L  D  K  L  L  F  F  L  K  S  K  S  *  I  G  V  T  C  F  T  *  P  L  S  L  L  I  *  E  N  L  I  Y  F  P  S  S  L  T  H  L   : G  R  P  W  K  N  I  A  R  N  L  R  T  *  P  *  G  S  C  V  N  W  Q  R  F  *  G  W  M  K </first_frame>
            <second_frame>  S  S  H  S  I  A  I  Y  S  *  *  F  R  K  D  I  L  F  H  I  N  A  S  S  S  S  D  *  Y  G  K  T  A  D  N  W  R  S  *  Y  R  R  A  *  E  A  S  F  C  L  Q  R  M  G  I  F  S   : G  G  E  S  W  G  E  F  I  V  V  G  E  S  E  V  R  N  P  S  I  F  R  S  T  N  G  R  E  E  E  V  *  S  T  R  R  G  R  *  R  I  W  T  S  F  C  F  F  S  R  A  K  V  R  L  G  *  L  V  L  H  D  H  S  P  Y  *  F  E  K  T  S  F  I  S  Q  A  P  S  L  T  *  :  G  D  H  G  R  T  *  Q  G  I  *  E  P  S  H  K  D  L  V  S  I  G  K  G  F  R  D  G  *   </second_frame>
            <third_frame>   A  A  I  P  S  R  Y  I  R  D  D  L  E  K  T  S  C  S  I  L  M  P  Q  V  P  V  I  D  M  E  K  L  L  I  I  G  D  H  D  T  A  E  L  E  R  L  H  F  A  C  K  E  W  G  F  F  Q  :  V  V  N  H  G  V  S  S  L  L  L  E  K  V  K  S  E  I  R  A  F  F  D  L  P  M  E  E  K  K  K  F  D  Q  Q  E  G  D  V  E  G  F  G  Q  A  F  V  F  S  Q  E  Q  K  L  D  W  G  D  L  F  Y  M  T  T  L  P  T  N  L  R  K  P  H  L  F  P  K  L  P  H  S  L  R :   E  T  M  E  E  H  S  K  E  F  K  N  L  A  I  R  I  L  C  Q  L  A  K  V  L  G  M  D  E  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0212P19.2" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="33864" stop="33694"/>
                    <exon start="33612" stop="33365"/>
                    <exon start="33244" stop="33157"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>507</number_coding_nucleotides>
                  <number_encoded_amino_acids>169</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AAIPSRYIRDDLEKTSCSILMPQVPVIDMEKLLIIGDHDTAELERLHFACKEWGFFQVVNHGVSSLLLEKVKSEIRAFFDLPMEEKKKFDQQEGDVEGFGQAFVFSQEQKLDWGDLFYMTTLPTNLRKPHLFPKLPHSLRETMEEHSKEFKNLAIRILCQLAKVLGMDE</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="37723" PGL_stop="38034"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="37723" e_stop="38034"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.949"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.949">
            <gDNA_exon_boundary e_start="37723" e_stop="38034" e_length="312"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37723" stop="38034"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E606385" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATATATGCAGTTATTACATTAACTCTCCTATGAAACTGGAATAAGGGTGAGATAAAATCGGTGCATATAGACAAGGAGAAGCAGGCTAGGCTAGTATAAACAAGAAACGTTTCACAAAAATGCGCTATTATCACAAGATCTCTCCATCTTCCCAATCTCCACCACCACTCAATATTGCATCTTCATCTTCATCATCATATAAGTAGTCCTCTTTGATGCATAAGCCAAGCCTTTCCAGAGGGTTCTCCCCCAATATGATAGTGAATCCATCTCCATTACCACTCAAATTCTCAGCTTCTGAACAGCATTTAC</gDNA_template>
            <first_frame> I  Y  A  V  I  T  L  T  L  L  *  N  W  N  K  G  E  I  K  S  V  H  I  D  K  E  K  Q  A  R  L  V  *  T  R  N  V  S  Q  K  C  A  I  I  T  R  S  L  H  L  P  N  L  H  H  H  S  I  L  H  L  H  L  H  H  H  I  S  S  P  L  *  C  I  S  Q  A  F  P  E  G  S  P  P  I  *  *  *  I  H  L  H  Y  H  S  N  S  Q  L  L  N  S  I  Y </first_frame>
            <second_frame>  Y  M  Q  L  L  H  *  L  S  Y  E  T  G  I  R  V  R  *  N  R  C  I  *  T  R  R  S  R  L  G  *  Y  K  Q  E  T  F  H  K  N  A  L  L  S  Q  D  L  S  I  F  P  I  S  T  T  T  Q  Y  C  I  F  I  F  I  I  I  *  V  V  L  F  D  A  *  A  K  P  F  Q  R  V  L  P  Q  Y  D  S  E  S  I  S  I  T  T  Q  I  L  S  F  *  T  A  F   </second_frame>
            <third_frame>   I  C  S  Y  Y  I  N  S  P  M  K  L  E  *  G  *  D  K  I  G  A  Y  R  Q  G  E  A  G  *  A  S  I  N  K  K  R  F  T  K  M  R  Y  Y  H  K  I  S  P  S  S  Q  S  P  P  P  L  N  I  A  S  S  S  S  S  S  Y  K  *  S  S  L  M  H  K  P  S  L  S  R  G  F  S  P  N  M  I  V  N  P  S  P  L  P  L  K  F  S  A  S  E  Q  H  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0212P19.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 79 chains have been computed
$ 
$ memory statistics:
$ 159968 bytes spliced alignments in total
$ 38 spliced alignments have been stored
$ 4209 bytes was the average size of a spliced alignment
$ 16000 bytes predicted gene locations in total
$ 9 predicted gene locations have been stored
$ 1777 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 88 backtrace matrices have been allocated
$ 
$ date finished: 2009-07-28 13:36:06
-->
