<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-12-01 09:54:55"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02HBa0190N21-cHQgB/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02HBa0190N21-cHQgB/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0190N21-cHQgB/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U588435" ref_strand="+" ref_description="SGN-U588435 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157350256|emb|CAO40194.1| (e_value=3e-37) unnamed; (*ATH) AT1G48230.1 (e_value=1e-37)  Symbol: None | phosphate translocator-related, low similarity to phosphoenolpyruvate/phosphate translocator precursor (Mesembryanthemum crystallinum) GI:9295275, SP:P52178 Triose phosphate/phosphate translocator, non-green plastid, chloroplast precu... ; ">
      <seq>gggctaaccaatcgacagaattaaatcaacaaaatcagatcgaaccgtcggcatctcgccggaaatagatctccttctcacgaattccgagctctttctcctgactttatcagtccatgtttctataacggcataagcagaaacaaggctggtgcattacaatcattgttaaggaatgaatacagacgttgagctaaattttcacctcgtaactgcacagatctcctggatccgagtttattgatttttggatttgagagacttacattgtaatatagggaggtggagccatttgaatcaccaagtgacttacaatgatgatcagcaaagagcttttattgacttacgtttatctccttgtctatatcgtgctttcatcaggagttattttgtataacaaggtggtgtcacctgtcaagatgactcttgaaatatatgcaacgtgcgttattccaatcagtgctttctttgctgcaagtctttggtttggcaacaccgcatatttgttcatttcagtggccttcatccagatgctcaaagctctgatgccggtggccacatttgtcatggctgttatttgtggaactgacaaactaagatgcgatgtattcttgaacatgtttttggtcagtgttggtgttgtaatatcctcct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0190N21-cHQgB/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0190N21.3" temp_strand="+" temp_description="C02HBa0190N21.3  AC215414.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0190N21 sequenced_by:kribb upload_account_name:korea">
        <position start="25364" stop="31702"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25664" g_stop="25766" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="103" r_length="103" r_score="0.981"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25767" i_stop="26731" i_length="965">
            <donor d_prob="0.732" d_score="0.98"/>
            <acceptor a_prob="0.594" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26732" g_stop="27029" g_length="298"/>
          <reference_exon_boundary r_type="cDNA" r_start="104" r_stop="401" r_length="298" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="27030" i_stop="29699" i_length="2670">
            <donor d_prob="0.969" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29700" g_stop="29731" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="402" r_stop="433" r_length="32" r_score="0.969"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="29732" i_stop="29811" i_length="80">
            <donor d_prob="0.945" d_score="0.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="29812" g_stop="29862" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="434" r_stop="484" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="29863" i_stop="31140" i_length="1278">
            <donor d_prob="0.796" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="31141" g_stop="31202" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="485" r_stop="546" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="31203" i_stop="31294" i_length="92">
            <donor d_prob="0.930" d_score="1.00"/>
            <acceptor a_prob="0.783" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="31295" g_stop="31402" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="547" r_stop="654" r_length="108" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0190N21.3" gen_strand="+" ref_id="SGN-U588435" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>654</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0190N21.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U588435" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25664" e_stop="25766"/>
          <exon e_start="26732" e_stop="27029"/>
          <exon e_start="29700" e_stop="29731"/>
          <exon e_start="29812" e_stop="29862"/>
          <exon e_start="31141" e_stop="31202"/>
          <exon e_start="31295" e_stop="31402"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGCTAACCAATCGACAGAATTAAATCAACAAAATCAGATCGAATCGTCGGCATCTCGCCGGAAATAGATCTCCGTCTCACGAATTCCGAGCTCTTTCTCCTGGTACCTGTTCTCGGTCTACATTTTCGTTCTCCTTTACCTGAACGTGTAGGTGTATATTGGTGTGAGGATAAATTTATGTGTATATTTTCTCCTTTTCCGCTAGAGATGCTATCACTACTTTTTTGTTGTTTTATCTGTATTATTATTGTTATTAGTAGCAGTAGTAGCTGGTTTTGCTAGCTCATATCATATGCTTACTCGGCTTCGTTTTAGTTTTCCGGATATTCATATGTTCTTCTATTGTTTTTGTTTTTTTAATTATTATTAGTATTCACTTTTGTTGCCACTGCTTGCACTTTTTTGAGTTCGCTTATATTGCGTTGTTTCCTGAATTGATTCAACATTAAGAAAATCTGGTCGTTGAAGGATTAGGAGTGCTATTTTATTGCTTACTTTGTTACTCGATAAGTCGATATTACCAGTTAGAAGTTTGTTGTATTCTGTCTGTTCTACAATAAGATGAAAGAAAATTTGCGGAATGTGAGTTTTTTTAAAATGTTTCATAGCAAGTTCTTTTGGTGAGCATTGCGTTAACTGCAGTCTAGAGGGGTTGATTGGCAAATTGAGTCTGTGTATGCCCATAAATATTAGCTATGTCCAGATAGTCTTATAGAGTTCCCTGGCTCAGCAGGATACTCTTATTATTTGCATCTGATAGATTGCCAAGTTGTATTTTGTAATCTGTGTCATCTTGTGCATGCATTGGATGACTGCAAGTAGATATTTCTAAATTGGCCATTAAAGGATGTTTCATAGTGTGTGTTGCGGCAAGCTTTTTACCTTTTCATGGAATTCCATGCCATTAAAATTTATAATTTCGTCGTTACATTCATTTTATTTTGAAGTTCATATAATCTAGGTTTACTTGTTTAGTGCTTGCTTTGATTTATCAGGTTGTTTTGTCGTTAGAAAATGAAGACTCATTCTGATATTAGTAATTTGACATTTGACACACATATCTCCAGACTTTATCAGTCCATGTTTCTATAACGGCATAAGCAGAAACAAGGCTGGTGCATTACAATCATTGTTAAGGAATGAATACAGACGTTGAGCTAAATTTTCACCTCGTAACTGCACAGATCTCCTGGATCCGAGTTTATTGATTTTTGGATTTGAGAGACTTACATTGTAATATAGGGAGGTGGAGCCATTTGAATCACCAAGTGACTTACAATGATGATCAGCAAAGAGCTTTTATTGACTTACGTTTATCTCCTTGTCTATATCGTGCTTTCATCAGGAGTTATTTTGTATAACAAGGTATGTGTCTTTTTCCAAGTATTTCATGATTGCCTTCGACTTCATTGGATTCATGGATTGTGTTCTTTGTCAGTTAGATATGTAAATGTCTATAGCTTAAATGCATTTAAGCAACCTCAGAAATGAAAGAAGGAAATAAAATAAAATAAAGGGAAGTGAAAACCACAATTATATTAAAATTGTGGTTTAAGCGATTTCTGAGAAGAACCAAAGTGACAAGCTGCTACCATTTATTGCCATGTGCTTCCAAGGAAACTTAGAGGGGCCAGGGTCACTTACATTCTTAGGAAGCCAAAAGGAGGATAGTAAAACATGCATGATGCAACTATTTGCTGCTGGTCCAAAATCAACTGTCATAGCCATTCCTAACTGAATGGAGAAAGACAAAAGTTTCATTACTTCCCATTCAACTAAACAAACACCCTGAAGGGAAGATTAATTCTTTATGAGGGAGGACCCAATGTTTTTCATTCGGGATATAATCTGAGACTGATGTCAGTATGAGCAAGCTCTTACACGAGGAATTTTAATAATAAAAAAGAAATGAATAATAAATAGGGCAATATGAAAACCAATGATGTGGACACTGCACATAGTTGATTCAGAATTGGTCTCATTTGGCAGTAGAAGGTAGAAAATTCTTGTTCAACTATTTTGCAGTGTTTGTTTGTAATGCATATACTATGAGGCTATATTGTTCCTGTCGAATAAGGGGCACATGTTTTCAAATTTGCACTTCCTCACTCCTCTGCGTCCTTGCTGCACAAGCAGACTAGTGTCTTGGCTTTTCCAATAGCATGAATTATAGGAGTGAGCACACAGCAGGGCTTGACTTACAAACTTCATTTGTTCAAACACATCCCAAAGATTGACTTTTATGTATCTGGCCTTTTACTCCACCACCACAGCTGGCACAGGTCTTGGTGGGTGTTTGTTTTTTTCTTTTCTTTTTTTACCAGTCTGTATATGTTGCATTGTAAGCTACGGGAGAAGTTTCCTTTGGATATATTTTATCTCTGACTTAGTTGTAATTCTTTTACTTTTCAATATCATCAATACAATCTAACAATTTTCTTCTGCCATTTATATTATGTTTTTGCAGTGGGTGCTTTCACCAAAATATTTCAATTTCCCACTCCCAATTACACTTACCATGATACATATGGGCTTTTCAGGCTTAGTGGCTTTCTTTCTTGTCCGTGTCTTCAAGGTATGGTAGTTGAGAATTACTGAAATACATTGACATTTTTCTCTTACACTTAGTCATATTTGCTCTTCTGGATGATGACTTCTTGCTACTCAATTATTGTTGACATTGTTGTCGAAATGCTTGCTATTTGAGATTGCTAGGTATAAGTTGTGTTTCTACCAGGTTGCTTTCAGTAGGTTAGCATATTATATACACAATTGATATGATCCATGTATTAAAACTTAAAACTTAAAAGGTCCAGGATTTTCTTCAGATCTTTGTCACATAATTATTTTGTTCTGATGTTATTTCATTCATATTATTGTATCTATTAATACACCATGATCATTCAGCATCCTGATAACATCATCTTGTCTAATCAAACTTTAGTCATAGCAGGACAAAAGTCTCCCACCCCACCCCCCAAATACACACAAAATACTTTTGGCTTCTTCTTTAACTGCTGAATGACTTCTAATTTCTTGATTAATTATCAGATACTCCTTTTGGTCCTTTATCTTTCACTTCACGTAAAAGAATTTGGTCCAAAATATTTGTTCGGAAAACCAACAAGACATTAATTATTATTCTTCCAATTGGGCACTTACTACTCAAATAAGGCATGCAGTCATTAATTACTCAAAGATAAAGGTAATTTAGTCAAATACCCCTTATGATTAATGCTATTAAATAGTTTTCTTAATGAGTGTGCTAATACCTTAAATCTCAAAGAAAAAAGACTGTAGGGAGTAGAAGATAAAGGTTAAGCATTTACGTCTCTCTCGTTAATGCATTTGTGTTTCCCTGCGAGAATAGAAGTGTCTTGCCTAGTGTCTTTTCCGACTAAAACATTCATAATTATTATAAGCAGATTGCTACAATACTTTGATAAGTTAAACTATTTCCATTGAATTGATTTTAGGGATCTAGACGAGAAGCCTGGCAATTGTTTTTCTCTGTCTCGGCAGTTCCGTGATCCTGTATAAATATTACACGAATAATTTTTAGCCAAACAAAAGCTAAGCAACTCATGGAATTAGGGTCTAATGTGGTATGCTAATTTGAAAGGAAAATTCTTGGACAGATTTTTATTATGTTAGATTCATCTGAGCACTTATTGTTCTATTTTGAGGTTCATCCCTAGTCACTCTTCATCAGGATCTTTAACATTGTTGATGAATTCAATCTTTATTTGAGGAAACTACTGTGCTGTTGATAATTTATTCTCTTTTTGCACTGCTCTTTGGCCTTGGAGAGATGCTTGAGGCCATGCAAATGAACTTCCATGGAGAATTTGTTAAGTCTCTGTTTGTGTAATAAAAGGATTATTGGTGTATGGTCGTCTTTAGCTTCTGATTTTGCTTCATTCTTTTACATTATCTGAATTGGCAAATTAATCTTTCATCTCTGATCTTAGTGCTTTGATTCTCGTATTAAGTTTCATCTAGATGCTCCTTATAATTCATGATTATCTTTTGCAGGTGGTGTCGCCTGTCAAGATGACTCTTGAAATGTGAGAATTGCATACATTAACTGCTTTTACTTTGAAACTTATCATTGTTCTCATATATCCATTTATTACCGAATTTTCAGATATGCAACGTGCGTTATTCCAATCAGTGCTTTCTTTGCTGCAAGTCTTTGGTGAGCTCTCTACTTTGAGGAGCTAAAATTCTTGTTGGCTTTTCTTACGGGTTCTGTCTTTCATGATCACTTGTGACTTGTTGGTATTTATTCGTTTGAAAATTGGAGAGATTCCTATTAGACATACTCTATTATATTTTTCTTCATATTCAGCTACAGCTTAATATACTGTGCTACTAATAATGTTATGTCATAAAGTTTGACACTTTTGACTATTGATATTCCATATGTAGATACGTCACTATTTCACTCTTGGTTGCTCAAGTCAGGTGGAACGGAGGTCACTAATCTGAACTAATTGAAGATTTTCCGTAATTATGAAAGCTTTCGTATCTGCAGTTCCATCCTGTACATGGATGATCAGTTTCTCTCATTGTCTGATCAAACCTAATTTTGATGTCTCCTAAACTTTGGACATTGCTTGAGCTCACATTTCAAGTTTTCCCCACAAAACAAGAACAACATGCACATACTAGCAGAAATGTTCAACATTAAGAACAATGAGATTTTGAATCTTTGGCTTGAAATTGCTAAACTGCTTTACCTGCTGAGATGAGTACCTAGAAATAAATGAGACTTTCTCTCTGTACTGGCTATCTCCTGGATGCTTTCATTAATAATAATTTACAGTTATAAATAGAAAAGGCCCGTATCTGATCAATTGTTACAATATAGATGGAATCAATCTACTCACACTTGTTATTGTTTAATTCTCTTTTGCTGATGACGCAAAAGTCCTTTTTTTGGTATCCTTGTAGCTCATTTTTAAAACCGTGTTAAAAAATGTAGGCATTTCATATTTCAGGTAAATGTGAATAGTAATAGTTTATTTCAGACTTCAGAGTTATCCTACACCTTTCTACTTGTTTATGTGGTGGGTGGATCATTTAGCTTCTCGTGATCCTTTCTTTGCCACTTCTTATTTCTGTACTAAAGTAAAGATGAAAGGAAACCTAGGCAAGAAATCGGGATGATGATAAAAATGGTGGACACCTCCATCTGTAGGTCATTACTTTTTAAGAGATGACTATTGGATGGGTAATATGCATGCTCCCTTTCCTGCATTGTACCTGCATCACACCACGGCGAAAATTTTCTACTAACCTCTGCTGACCCTACAAGCCCATATGGGGGTCGTCTTATAACAAAGAGGGTACTCTCTTCTTTGATGTGCGCTATATTATTGTGTACTATTCCTTAAGGAGTGATTTGTGAATGAGTTGAGGCTATGAGGTTAAAATAAATTTATGCTGAAAGGTGCATATTTTGTGCTCACAGGTTTGGCAACACCGCATATTTGTTCATTTCAGTGGCCTTCATCCAGATGCTCAAAGCTCTGAGTATGTCATATACAGTATTCTTTTCTAGTTACAAATTCCTGTGCTCGGGAATCTACTGAATGGCTGAAGCTTTCTCTGTATTGAAATCACAGTGCCGGTGGCCACATTTGTCATGGCTGTTATTTGTGGAACTGACAAACTAAGATGCGATGTATTCTTGAACATGTTTTTGGTCAGTGTTGGTGTTGTAATATCCTCCT</genome_strand>
        <mrna_strand>GGGCTAACCAATCGACAGAATTAAATCAACAAAATCAGATCGAACCGTCGGCATCTCGCCGGAAATAGATCTCCTTCTCACGAATTCCGAGCTCTTTCTCCTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTTATCAGTCCATGTTTCTATAACGGCATAAGCAGAAACAAGGCTGGTGCATTACAATCATTGTTAAGGAATGAATACAGACGTTGAGCTAAATTTTCACCTCGTAACTGCACAGATCTCCTGGATCCGAGTTTATTGATTTTTGGATTTGAGAGACTTACATTGTAATATAGGGAGGTGGAGCCATTTGAATCACCAAGTGACTTACAATGATGATCAGCAAAGAGCTTTTATTGACTTACGTTTATCTCCTTGTCTATATCGTGCTTTCATCAGGAGTTATTTTGTATAACAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTGTCACCTGTCAAGATGACTCTTGAAAT................................................................................ATATGCAACGTGCGTTATTCCAATCAGTGCTTTCTTTGCTGCAAGTCTTTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGGCAACACCGCATATTTGTTCATTTCAGTGGCCTTCATCCAGATGCTCAAAGCTCTGA............................................................................................TGCCGGTGGCCACATTTGTCATGGCTGTTATTTGTGGAACTGACAAACTAAGATGCGATGTATTCTTGAACATGTTTTTGGTCAGTGTTGGTGTTGTAATATCCTCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0190N21-cHQgB/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U562730" ref_strand="+" ref_description="SGN-U562730 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|147844254|emb|CAN82124.1| (e_value=3e-52) hypothetical; (*ATH) AT1G48230.1 (e_value=1e-53)  Symbol: None | phosphate translocator-related, low similarity to phosphoenolpyruvate/phosphate translocator precursor (Mesembryanthemum crystallinum) GI:9295275, SP:P52178 Triose phosphate/phosphate translocator, non-green plastid, chloroplast precu... ; ">
      <seq>gggctaaccaatcgacagaattaaatcaacaaaatcagatcgaaccgtcggcatctcgccggaaatagatctccttctcacgaattccgagctctttctcctgactttatcagtccatgtttctataacggcataagcagaaacaaggctggtgcattacaatcattgttaaggaatgaatacagacgttgagctaaattttcacctcgtaactgcacagatctcctggatccgagtttattgatttttggatttgagagacttacattgtaatatagggaggtggagccatttgaatcaccaagtgacttacaatgatgatcagcaaagagcttttattgacttacgtttatctccttgtctatatcgtgctttcatcaggagttattttgtataacaagtgggtgctttcaccaaaatatttcaatttcccactcccaattacacttaccatgatacatatgggcttttcaggcttagtggctttctttcttgtccgtgtcttcaaggtggtgtcacctgtcaagatgactcttgaaatatatgcaacgtgcgttattccaatcagtgctttctttgctgcaagtctttggtttggcaacaccgcatatttgttcatttcagtggccttcatccagatgctcaaagctctgatgccggtggccacatttgtcatggctgttatttgtggaactgacaaactaanangcgatgtantcttgaacatgtttttggtcagngg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0190N21-cHQgB/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0190N21.3" temp_strand="+" temp_description="C02HBa0190N21.3  AC215414.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0190N21 sequenced_by:kribb upload_account_name:korea">
        <position start="25364" stop="31681"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25664" g_stop="25766" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="103" r_length="103" r_score="0.981"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25767" i_stop="26731" i_length="965">
            <donor d_prob="0.732" d_score="0.98"/>
            <acceptor a_prob="0.594" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26732" g_stop="27029" g_length="298"/>
          <reference_exon_boundary r_type="cDNA" r_start="104" r_stop="401" r_length="298" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="27030" i_stop="28131" i_length="1102">
            <donor d_prob="0.969" d_score="1.00"/>
            <acceptor a_prob="0.954" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28132" g_stop="28239" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="402" r_stop="509" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="28240" i_stop="29699" i_length="1460">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="29700" g_stop="29731" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="510" r_stop="541" r_length="32" r_score="0.969"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="29732" i_stop="29811" i_length="80">
            <donor d_prob="0.945" d_score="0.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="29812" g_stop="29862" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="542" r_stop="592" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="29863" i_stop="31140" i_length="1278">
            <donor d_prob="0.796" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="31141" g_stop="31202" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="593" r_stop="654" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="31203" i_stop="31294" i_length="92">
            <donor d_prob="0.930" d_score="1.00"/>
            <acceptor a_prob="0.783" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="31295" g_stop="31382" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="655" r_stop="742" r_length="88" r_score="0.943"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0190N21.3" gen_strand="+" ref_id="SGN-U562730" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>742</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0190N21.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U562730" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25664" e_stop="25766"/>
          <exon e_start="26732" e_stop="27029"/>
          <exon e_start="28132" e_stop="28239"/>
          <exon e_start="29700" e_stop="29731"/>
          <exon e_start="29812" e_stop="29862"/>
          <exon e_start="31141" e_stop="31202"/>
          <exon e_start="31295" e_stop="31382"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGCTAACCAATCGACAGAATTAAATCAACAAAATCAGATCGAATCGTCGGCATCTCGCCGGAAATAGATCTCCGTCTCACGAATTCCGAGCTCTTTCTCCTGGTACCTGTTCTCGGTCTACATTTTCGTTCTCCTTTACCTGAACGTGTAGGTGTATATTGGTGTGAGGATAAATTTATGTGTATATTTTCTCCTTTTCCGCTAGAGATGCTATCACTACTTTTTTGTTGTTTTATCTGTATTATTATTGTTATTAGTAGCAGTAGTAGCTGGTTTTGCTAGCTCATATCATATGCTTACTCGGCTTCGTTTTAGTTTTCCGGATATTCATATGTTCTTCTATTGTTTTTGTTTTTTTAATTATTATTAGTATTCACTTTTGTTGCCACTGCTTGCACTTTTTTGAGTTCGCTTATATTGCGTTGTTTCCTGAATTGATTCAACATTAAGAAAATCTGGTCGTTGAAGGATTAGGAGTGCTATTTTATTGCTTACTTTGTTACTCGATAAGTCGATATTACCAGTTAGAAGTTTGTTGTATTCTGTCTGTTCTACAATAAGATGAAAGAAAATTTGCGGAATGTGAGTTTTTTTAAAATGTTTCATAGCAAGTTCTTTTGGTGAGCATTGCGTTAACTGCAGTCTAGAGGGGTTGATTGGCAAATTGAGTCTGTGTATGCCCATAAATATTAGCTATGTCCAGATAGTCTTATAGAGTTCCCTGGCTCAGCAGGATACTCTTATTATTTGCATCTGATAGATTGCCAAGTTGTATTTTGTAATCTGTGTCATCTTGTGCATGCATTGGATGACTGCAAGTAGATATTTCTAAATTGGCCATTAAAGGATGTTTCATAGTGTGTGTTGCGGCAAGCTTTTTACCTTTTCATGGAATTCCATGCCATTAAAATTTATAATTTCGTCGTTACATTCATTTTATTTTGAAGTTCATATAATCTAGGTTTACTTGTTTAGTGCTTGCTTTGATTTATCAGGTTGTTTTGTCGTTAGAAAATGAAGACTCATTCTGATATTAGTAATTTGACATTTGACACACATATCTCCAGACTTTATCAGTCCATGTTTCTATAACGGCATAAGCAGAAACAAGGCTGGTGCATTACAATCATTGTTAAGGAATGAATACAGACGTTGAGCTAAATTTTCACCTCGTAACTGCACAGATCTCCTGGATCCGAGTTTATTGATTTTTGGATTTGAGAGACTTACATTGTAATATAGGGAGGTGGAGCCATTTGAATCACCAAGTGACTTACAATGATGATCAGCAAAGAGCTTTTATTGACTTACGTTTATCTCCTTGTCTATATCGTGCTTTCATCAGGAGTTATTTTGTATAACAAGGTATGTGTCTTTTTCCAAGTATTTCATGATTGCCTTCGACTTCATTGGATTCATGGATTGTGTTCTTTGTCAGTTAGATATGTAAATGTCTATAGCTTAAATGCATTTAAGCAACCTCAGAAATGAAAGAAGGAAATAAAATAAAATAAAGGGAAGTGAAAACCACAATTATATTAAAATTGTGGTTTAAGCGATTTCTGAGAAGAACCAAAGTGACAAGCTGCTACCATTTATTGCCATGTGCTTCCAAGGAAACTTAGAGGGGCCAGGGTCACTTACATTCTTAGGAAGCCAAAAGGAGGATAGTAAAACATGCATGATGCAACTATTTGCTGCTGGTCCAAAATCAACTGTCATAGCCATTCCTAACTGAATGGAGAAAGACAAAAGTTTCATTACTTCCCATTCAACTAAACAAACACCCTGAAGGGAAGATTAATTCTTTATGAGGGAGGACCCAATGTTTTTCATTCGGGATATAATCTGAGACTGATGTCAGTATGAGCAAGCTCTTACACGAGGAATTTTAATAATAAAAAAGAAATGAATAATAAATAGGGCAATATGAAAACCAATGATGTGGACACTGCACATAGTTGATTCAGAATTGGTCTCATTTGGCAGTAGAAGGTAGAAAATTCTTGTTCAACTATTTTGCAGTGTTTGTTTGTAATGCATATACTATGAGGCTATATTGTTCCTGTCGAATAAGGGGCACATGTTTTCAAATTTGCACTTCCTCACTCCTCTGCGTCCTTGCTGCACAAGCAGACTAGTGTCTTGGCTTTTCCAATAGCATGAATTATAGGAGTGAGCACACAGCAGGGCTTGACTTACAAACTTCATTTGTTCAAACACATCCCAAAGATTGACTTTTATGTATCTGGCCTTTTACTCCACCACCACAGCTGGCACAGGTCTTGGTGGGTGTTTGTTTTTTTCTTTTCTTTTTTTACCAGTCTGTATATGTTGCATTGTAAGCTACGGGAGAAGTTTCCTTTGGATATATTTTATCTCTGACTTAGTTGTAATTCTTTTACTTTTCAATATCATCAATACAATCTAACAATTTTCTTCTGCCATTTATATTATGTTTTTGCAGTGGGTGCTTTCACCAAAATATTTCAATTTCCCACTCCCAATTACACTTACCATGATACATATGGGCTTTTCAGGCTTAGTGGCTTTCTTTCTTGTCCGTGTCTTCAAGGTATGGTAGTTGAGAATTACTGAAATACATTGACATTTTTCTCTTACACTTAGTCATATTTGCTCTTCTGGATGATGACTTCTTGCTACTCAATTATTGTTGACATTGTTGTCGAAATGCTTGCTATTTGAGATTGCTAGGTATAAGTTGTGTTTCTACCAGGTTGCTTTCAGTAGGTTAGCATATTATATACACAATTGATATGATCCATGTATTAAAACTTAAAACTTAAAAGGTCCAGGATTTTCTTCAGATCTTTGTCACATAATTATTTTGTTCTGATGTTATTTCATTCATATTATTGTATCTATTAATACACCATGATCATTCAGCATCCTGATAACATCATCTTGTCTAATCAAACTTTAGTCATAGCAGGACAAAAGTCTCCCACCCCACCCCCCAAATACACACAAAATACTTTTGGCTTCTTCTTTAACTGCTGAATGACTTCTAATTTCTTGATTAATTATCAGATACTCCTTTTGGTCCTTTATCTTTCACTTCACGTAAAAGAATTTGGTCCAAAATATTTGTTCGGAAAACCAACAAGACATTAATTATTATTCTTCCAATTGGGCACTTACTACTCAAATAAGGCATGCAGTCATTAATTACTCAAAGATAAAGGTAATTTAGTCAAATACCCCTTATGATTAATGCTATTAAATAGTTTTCTTAATGAGTGTGCTAATACCTTAAATCTCAAAGAAAAAAGACTGTAGGGAGTAGAAGATAAAGGTTAAGCATTTACGTCTCTCTCGTTAATGCATTTGTGTTTCCCTGCGAGAATAGAAGTGTCTTGCCTAGTGTCTTTTCCGACTAAAACATTCATAATTATTATAAGCAGATTGCTACAATACTTTGATAAGTTAAACTATTTCCATTGAATTGATTTTAGGGATCTAGACGAGAAGCCTGGCAATTGTTTTTCTCTGTCTCGGCAGTTCCGTGATCCTGTATAAATATTACACGAATAATTTTTAGCCAAACAAAAGCTAAGCAACTCATGGAATTAGGGTCTAATGTGGTATGCTAATTTGAAAGGAAAATTCTTGGACAGATTTTTATTATGTTAGATTCATCTGAGCACTTATTGTTCTATTTTGAGGTTCATCCCTAGTCACTCTTCATCAGGATCTTTAACATTGTTGATGAATTCAATCTTTATTTGAGGAAACTACTGTGCTGTTGATAATTTATTCTCTTTTTGCACTGCTCTTTGGCCTTGGAGAGATGCTTGAGGCCATGCAAATGAACTTCCATGGAGAATTTGTTAAGTCTCTGTTTGTGTAATAAAAGGATTATTGGTGTATGGTCGTCTTTAGCTTCTGATTTTGCTTCATTCTTTTACATTATCTGAATTGGCAAATTAATCTTTCATCTCTGATCTTAGTGCTTTGATTCTCGTATTAAGTTTCATCTAGATGCTCCTTATAATTCATGATTATCTTTTGCAGGTGGTGTCGCCTGTCAAGATGACTCTTGAAATGTGAGAATTGCATACATTAACTGCTTTTACTTTGAAACTTATCATTGTTCTCATATATCCATTTATTACCGAATTTTCAGATATGCAACGTGCGTTATTCCAATCAGTGCTTTCTTTGCTGCAAGTCTTTGGTGAGCTCTCTACTTTGAGGAGCTAAAATTCTTGTTGGCTTTTCTTACGGGTTCTGTCTTTCATGATCACTTGTGACTTGTTGGTATTTATTCGTTTGAAAATTGGAGAGATTCCTATTAGACATACTCTATTATATTTTTCTTCATATTCAGCTACAGCTTAATATACTGTGCTACTAATAATGTTATGTCATAAAGTTTGACACTTTTGACTATTGATATTCCATATGTAGATACGTCACTATTTCACTCTTGGTTGCTCAAGTCAGGTGGAACGGAGGTCACTAATCTGAACTAATTGAAGATTTTCCGTAATTATGAAAGCTTTCGTATCTGCAGTTCCATCCTGTACATGGATGATCAGTTTCTCTCATTGTCTGATCAAACCTAATTTTGATGTCTCCTAAACTTTGGACATTGCTTGAGCTCACATTTCAAGTTTTCCCCACAAAACAAGAACAACATGCACATACTAGCAGAAATGTTCAACATTAAGAACAATGAGATTTTGAATCTTTGGCTTGAAATTGCTAAACTGCTTTACCTGCTGAGATGAGTACCTAGAAATAAATGAGACTTTCTCTCTGTACTGGCTATCTCCTGGATGCTTTCATTAATAATAATTTACAGTTATAAATAGAAAAGGCCCGTATCTGATCAATTGTTACAATATAGATGGAATCAATCTACTCACACTTGTTATTGTTTAATTCTCTTTTGCTGATGACGCAAAAGTCCTTTTTTTGGTATCCTTGTAGCTCATTTTTAAAACCGTGTTAAAAAATGTAGGCATTTCATATTTCAGGTAAATGTGAATAGTAATAGTTTATTTCAGACTTCAGAGTTATCCTACACCTTTCTACTTGTTTATGTGGTGGGTGGATCATTTAGCTTCTCGTGATCCTTTCTTTGCCACTTCTTATTTCTGTACTAAAGTAAAGATGAAAGGAAACCTAGGCAAGAAATCGGGATGATGATAAAAATGGTGGACACCTCCATCTGTAGGTCATTACTTTTTAAGAGATGACTATTGGATGGGTAATATGCATGCTCCCTTTCCTGCATTGTACCTGCATCACACCACGGCGAAAATTTTCTACTAACCTCTGCTGACCCTACAAGCCCATATGGGGGTCGTCTTATAACAAAGAGGGTACTCTCTTCTTTGATGTGCGCTATATTATTGTGTACTATTCCTTAAGGAGTGATTTGTGAATGAGTTGAGGCTATGAGGTTAAAATAAATTTATGCTGAAAGGTGCATATTTTGTGCTCACAGGTTTGGCAACACCGCATATTTGTTCATTTCAGTGGCCTTCATCCAGATGCTCAAAGCTCTGAGTATGTCATATACAGTATTCTTTTCTAGTTACAAATTCCTGTGCTCGGGAATCTACTGAATGGCTGAAGCTTTCTCTGTATTGAAATCACAGTGCCGGTGGCCACATTTGTCATGGCTGTTATTTGTGGAACTGACAAACTAAGATGCGATGTATTCTTGAACATGTTTTTGGTCAGTGT</genome_strand>
        <mrna_strand>GGGCTAACCAATCGACAGAATTAAATCAACAAAATCAGATCGAACCGTCGGCATCTCGCCGGAAATAGATCTCCTTCTCACGAATTCCGAGCTCTTTCTCCTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTTATCAGTCCATGTTTCTATAACGGCATAAGCAGAAACAAGGCTGGTGCATTACAATCATTGTTAAGGAATGAATACAGACGTTGAGCTAAATTTTCACCTCGTAACTGCACAGATCTCCTGGATCCGAGTTTATTGATTTTTGGATTTGAGAGACTTACATTGTAATATAGGGAGGTGGAGCCATTTGAATCACCAAGTGACTTACAATGATGATCAGCAAAGAGCTTTTATTGACTTACGTTTATCTCCTTGTCTATATCGTGCTTTCATCAGGAGTTATTTTGTATAACAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGTGCTTTCACCAAAATATTTCAATTTCCCACTCCCAATTACACTTACCATGATACATATGGGCTTTTCAGGCTTAGTGGCTTTCTTTCTTGTCCGTGTCTTCAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTGTCACCTGTCAAGATGACTCTTGAAAT................................................................................ATATGCAACGTGCGTTATTCCAATCAGTGCTTTCTTTGCTGCAAGTCTTTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGGCAACACCGCATATTTGTTCATTTCAGTGGCCTTCATCCAGATGCTCAAAGCTCTGA............................................................................................TGCCGGTGGCCACATTTGTCATGGCTGTTATTTGTGGAACTGACAAACTAANANGCGATGTANTCTTGAACATGTTTTTGGTCAGNGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0190N21-cHQgB/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U566336" ref_strand="+" ref_description="SGN-U566336 Tomato 200607#2 [7 ESTs aligned] (*GB) gi|157341264|emb|CAO49171.1| (e_value=3e-35) unnamed; (*ATH) AT5G39210.1 (e_value=1e-34) | Symbol: None | expressed protein | chr5:15720421-15721328 FORWARD | Aliases: K3K3.10, K3K3_10; ">
      <seq>gcaaaaaaaaaaaattaagaaatgcaaccattctgatatgttgttaactagtcattattgttcaaaaatagcaactcatggaggcacagttgtggtgcaataagacttacaattgtatagggacagagacatggagaattcaacatccactccaaattttgcatacaagtaattggcaacaacctatttttcagccttttaattcctcaatttcccacagtctgacttgtagacacatccaccgcaatggaataaagacatttgctacaagaaggagaagatcaaacatagaaacagacacttatgtactaatggaacctgggaagtcagaggaatttgttactgaggaagaattaagagacaagttaaagagttggttagaaaattggccagccaaaacactgccaccagaccttgctagatttgaagatagtgatgatgctgttgaatatttagtaaaatctgtttgtgaacttgaaattgatggagatgttggttccctacaatggtaccaagttcgtttacaacaagacatcatatgaaaagactctcgatttataattcgttacttttctaaataacagttgatgtaatttttctttgtatcgttttaattttattataagaaacactgtgataatgact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0190N21-cHQgB/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0190N21.3" temp_strand="+" temp_description="C02HBa0190N21.3  AC215414.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0190N21 sequenced_by:kribb upload_account_name:korea">
        <position start="35660" stop="38692"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="35958" g_stop="36077" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="120" r_length="120" r_score="0.983"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36078" i_stop="36687" i_length="610">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36688" g_stop="36824" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="121" r_stop="257" r_length="137" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="36825" i_stop="38000" i_length="1176">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="38001" g_stop="38392" g_length="392"/>
          <reference_exon_boundary r_type="cDNA" r_start="258" r_stop="645" r_length="388" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0190N21.3" gen_strand="+" ref_id="SGN-U566336" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>649</cumulative_length_of_scored_exons>
        <coverage percentage="1.006" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0190N21.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U566336" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="35958" e_stop="36077"/>
          <exon e_start="36688" e_stop="36824"/>
          <exon e_start="38001" e_stop="38392"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAAAAAAAAAAATTAAGAAATGCAACCATTCTGATATGTTGTTAACTAGTCATTATTGTTCAAAAATAGCAACTCATGGAGGCACAGTTGTGGTGCAATAAGACTTACAATTGTATAGGTAATTTCCCACTGAAATCCTTGGCACTTCTTCCTGTTTTTATCTAGTTAAAAACAGTGACTTTTTTTTTTATGTATTATTATTGAAAGTGGAATAACTTTGTATTATGCAACAAGTTAGAATCTCCATATTGATTTTGGAAATGGGTTGTTGTCTCGGGTCTCAAAATCCGGAGACGTATATACCTTGTCCTAAGCAATGTAAGAGATATTGACTTCGTTTTTTTTTTTACTAAGTATTCATAAATCACAAGTAAAATGAAAAGATAGGTTATAATATGAAAAATGACCCTTATTATTATTATATCGATGTATTCAATTTTTCACTTTTTCAAATCTCGACACATTTTGTGTATGCCACTAATTGTGATCTCTTGCTATGTATGGTTAGTTTTTTTGAGTTGACATGTATCTAAAGTTCGTTTTTCTTGAATATTTAGACACACTCCTATATATTCTTGAATTTCGAAATGAATTGTTATCTCATTGAGATGATTCTCACTTTGTGAACATCCCCAAAAAAATGAAAAAGGACCTTGTAGTTGTAGTAATTAAAGTAAAGTAGGACAAAAAAATGTTTTAGTAATTGTAACTTATATTTCATATGGCAGGGACAGAGACATGGAGAATTCAACATCCACTCCAAATTTTGCATACAAGTAATTGGCAACAACCTATTTTTCAGCCTTTTAATTCCTCAATTTCCCACAGTCTGACTTGTAGACACATCCACCGCAATGGAATAAAGGTATCTTTTGTGTAAATTACGCGAAGTTCACCATATTTGTCTTTCGTTGATACTTTGATTCATATTATATTTTTGTCGTTATTTAATTGGATTAAAAATATTTCAATTTCACAGAAAACTCAATCGAGCATAGTTAGAACACTAATAAAAACATATTTAACCTACACACGTATTATTAGTTCAATTTCTAATTCGTAAATGCAATTACCCAACAGCTTTTGAAGTTGTATTTGTACAACAACTTGATTATATTATAGTGAATTTAAATTAAAAATTCTAGTAAAGATGTAACAAACGCGAGTCCCGAGCCTAAAGGGTATAAAATATTAATAAAAATTTCAAAATGGTATATTTTTATATCAACCAAAACGAAAAAATTGCTGGAACAACAGCGATTTGCTCCGCCGGAAAAAGTAAAATCACTGCTACTGCAACGATTTTGTAAAATGTGATTTTTTTTTAAAAAAAAAACTTAAAGAAAATCGTTGCCTTAAAATTTATTTTTTTTTAAATAAAAGAAAGCTTTAAAAAAATTAAAAAAATGAAATCACTGCATAGGCAGCGATTTTCTTTTAAAAAAATCACATTCTGCACTGCAGCGATTTTGCTTTTTTCGGCTGAGGAAAGTCAACAATTTTACTGTTTTGATTACTATAAAATTTTATGTACCATTTTAAAATTTTTATTAATATTTTATACCCTTTAAGCTACGGACTCTAGCATACATAATGTCAATAAACGAGAAAATACATACATTACATTGCTTCAACCTACAAAGTATCTTTATATTCAATTAAACCACCAAATTCCATTATTAGATTCCATCAACTTCCATAACACACCCTTTAACTCAATATCACAAAAAAAAAAAAAATTTAGCGACAATAAGTATTAACATTAATTAAGAATGCTAAAAAAATTTTATCAGCATCAGTTAAGTGTCATTTGAACCAGTGTCACTAAAGACTTTAAGGACATATACGAAGAGTGTTAATTGCCGCTAAAGTTACATAAAAATTAATTGCAGTTAACAATCATTTTTATGTAGTGACGTGACCGATGAAAATTATTTAAAACTTCACTTCTGTTCATCTATTTTATATAGGTTAAGCAACACTTCACTTTGTTAATTGTCTCTTCTTCTTTTTTTGTGTGTGTGTAAAATAAATTAATCAGACATTTGCTACAAGAAGGAGAAGATCAAACATAGAAACAGACACTTATGTACTAATGGAACCTGGGAAGTCAGAGGAATTTGTTACTGAGGAAGAATTAAGAGACAAGTTAAAGAGTTGGTTAGAAAATTGGCCAGCCAAAACACTGCCACCAGACCTTGCTAGATTTGAAGATAGTGATGATGCTGTTGAATATTTAGTAAAATCTGTTTGTGAACTTGAAATTGATGGAGATGTTGGTTCCCTACAATGGTACCAAGTTCGTTTACAACAAGACATCATATGAAAGGACTCTCGATTTTTTTATAATCCGTTA-TTTTTTAAATAACAGTTGATGTAATTTTTCTTTGTATCATTTTAATTTTATTAAAAAAAAACACTGTGATAATGACT</genome_strand>
        <mrna_strand>GCAAAAAAAAAAAATTAAGAAATGCAACCATTCTGATATGTTGTTAACTAGTCATTATTGTTCAAAAATAGCAACTCATGGAGGCACAGTTGTGGTGCAATAAGACTTACAATTGTATAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACAGAGACATGGAGAATTCAACATCCACTCCAAATTTTGCATACAAGTAATTGGCAACAACCTATTTTTCAGCCTTTTAATTCCTCAATTTCCCACAGTCTGACTTGTAGACACATCCACCGCAATGGAATAAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATTTGCTACAAGAAGGAGAAGATCAAACATAGAAACAGACACTTATGTACTAATGGAACCTGGGAAGTCAGAGGAATTTGTTACTGAGGAAGAATTAAGAGACAAGTTAAAGAGTTGGTTAGAAAATTGGCCAGCCAAAACACTGCCACCAGACCTTGCTAGATTTGAAGATAGTGATGATGCTGTTGAATATTTAGTAAAATCTGTTTGTGAACTTGAAATTGATGGAGATGTTGGTTCCCTACAATGGTACCAAGTTCGTTTACAACAAGACATCATATGAAAAGACTCTCGA----TTTATAATTCGTTACTTTTCTAAATAACAGTTGATGTAATTTTTCTTTGTATCGTTTTAATTTTATT-ATAAGAAACACTGTGATAATGACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0190N21-cHQgB/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U577761" ref_strand="+" ref_description="SGN-U577761 Tomato 200607#2 [13 ESTs aligned] (*GB) gi|624925|dbj|BAA05170.1| (e_value=5e-45) RNA-binding glycine rich protein (RGP-2) [Nicotiana sylvestris]; (*ATH) AT5G61030.1 (e_value=2e-31)  Symbol: None | RNA-binding protein, putative, similar to RNA-binding protein from (Solanum tuberosum) GI:15822705, (Nicotiana tabacum) GI:15822703, (Nicotiana sylvestris) GI:624925; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA re... ; (*SWP) sp|Q9SVM8|GRP2_ARATH (e_value=2e-22) Glycine-rich RNA-binding protein 2, mitochondrial OS=Arabidopsis thaliana GN=GRP2; ">
      <seq>ggcgattggcggccaatcggccgaattcccatggggatccgatggactgaactcacctgggtataagaaaaaataaataaaaaaaatcttcgaaggttttaaagatggctttattcaatagaattggaaatatgcttaaacagagtgtaagcagacacacaaatttggaattgtgtgccactagaacctcactttaccaggctataagaagcatgtcttcttcaaagctttttgttggaggtctctcatatggcactgatgagacctctctgcgagaggcattctcccaacatggtcaagtgattgaagctagagttatttttgatcgtgacagtgggagatccagagggtttggttttgttacttatacatctgctgaagaagcatcaagtgccctgagtgccttggatggccaggatctccacgggagacggataagggtgaattatgccacagaaaagcgtcctggaggattcgggcgtggttctggtggtggaggtggatttagctatggtgggggagctggaggttactcatatgggaattatggaggtggtggtaactatggtagcaacaacagttaccctgcaggtggtggcagctatggtggggatagttttggggctggatatggtggtgggagtagtggaagttacaacgctggtgtttccgctagtaatgacttcttggacaactctgaatttggtgggagccctgggacctcgcacaatggtggtgaagaacagcttagtgcagaccaagggactgaatctgtagacaatgatttcacaccaggtgtagaaaggagcagcagcgacgacaatgatgagccaaaggactacgccaactcgaggagttcataatacgtcctcatatgctattcaccaactttgggtttgatgagtacatgttcacaatacgtgttgagttaaaagaaagtatattctatttccagcagggttgctactggttgaatgcttcatctaagtttaatcaatctgtaggattacactactcgtttcataaatgttttaagttcatggagctctccaagtactgattttgtgcaatgtacagtgctgaatctttccct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0190N21-cHQgB/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0190N21.3" temp_strand="+" temp_description="C02HBa0190N21.3  AC215414.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0190N21 sequenced_by:kribb upload_account_name:korea">
        <position start="39282" stop="42785"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="39589" g_stop="39640" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="44" r_stop="95" r_length="52" r_score="0.981"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="39641" i_stop="40663" i_length="1023">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="40664" g_stop="40807" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="96" r_stop="240" r_length="145" r_score="0.979"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="40808" i_stop="40898" i_length="91">
            <donor d_prob="0.916" d_score="1.00"/>
            <acceptor a_prob="0.932" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="40899" g_stop="40967" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="241" r_stop="309" r_length="69" r_score="0.986"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="40968" i_stop="41107" i_length="140">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="0.872" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="41108" g_stop="41214" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="310" r_stop="416" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="41215" i_stop="41806" i_length="592">
            <donor d_prob="0.919" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="41807" g_stop="42485" g_length="679"/>
          <reference_exon_boundary r_type="cDNA" r_start="417" r_stop="1093" r_length="677" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0190N21.3" gen_strand="+" ref_id="SGN-U577761" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>1051</cumulative_length_of_scored_exons>
        <coverage percentage="0.962" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0190N21.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U577761" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="39589" e_stop="39640"/>
          <exon e_start="40664" e_stop="40807"/>
          <exon e_start="40899" e_stop="40967"/>
          <exon e_start="41108" e_stop="41214"/>
          <exon e_start="41807" e_stop="42485"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGACTGAACTCACCTGGGTATAAGAAAAAATAAATAAAAAAAATCTTCGAAGGTATGTTTCTTCTTGAATTTTTACTATATCCATTTTCGATTAGCTTAATGTTTAAAAGGGTTTTCATTTTTAGGATACAGATTGTTATTATTTCAACTTGTTTCATTGTTTCCATTTTATAAGGTTGGGGTTTTGATCATTTTCATTCTGTTTCTTGAATACCATTATTAGTACTGTGAGTTATAGTTATGATATGATCGTGGGGGTTTACAGCTACATTTTTCTTGGTTTTTTGTACCGTGATACATTTGAGCTGAGGGTCTTTCGGAAGCGGTCTCTGTATTGAATCTTTTTTTGTTTTGGAGATCAGTAGTGACTAGTGAGCATATTGGGTGCTGATTGCTTGTAAAAATAGGATCTTTAGTATTTTTTGTTGATGGGTTTTGATTAATAGGGAGATTAGTTCATGGCTGGTTTATTTTTGGTAATTTCCGCCGGAGGGAACTGTAGGATGAGGAATGTATGTGTCTTGTGCTCTATAATTGTAGGGACTCTTCAGTTTTGATGTTGTACCCGTGTTGGGTTCTTATAAAATGCACTACTTTTGGAGAATCCGACAGGCACCCGTTTACATTTTTTAAGAGTCTGAGCAACATAAGTTGTATGACAAATATGGAAGAGTAGGTATATATTTGCTTTGTGCTGTTTTGTATGACTATGTTTGATTGAACATGTTTATTGGACTGAGTTACTATTAAAGAAATGGGAAGTTAGTTTAAATGTGTTTGATGTCAAGATGAATTTGAATTCTTTGAAGTCATGATATGGTGAAAGTTGTATTGAGTAATTTTCTTGATGGGATGTTTCACATATTTTGGAATGTCACTGTTATATAAATAGAGACGAAATATGAGCTCGGAGAAAAGGAGCCATCTTTTTCTTTTGCTTTACGCTGTTTCGTGTCATCTAGTGCCTTCCAGCATTATGGTAGAACTATTCTACTATCAAAGATTTCTTCTAAATCCAACATTTATTCTCATGTTATGTTTAATATTGACTCCTGTTGTTCTGTTCTTTTCATAGG-TTTAAAGATGGCTTTATTCAATAGAATTGGAAATATGCTTAAACAGAGTGTAAGCAGACACACGAATTTGGAATTGTGTGCCACTAGAACCTCACTTTACCAGGCTATAAGAAGCATGTCTTCTTCAAAGCTTTTTGTTGGAGGTAAAAGGATTTTGTTCCCAGTAGTATGCAGTTGCTATGTTCTTTTTCCTTCCTTTTGTTGCTCTATAATGGCGCCAACTATCCCCTGCAGGTCTCTCATATGGCACTGATGAAACCTCTCTGCGAGAGGCATTCTCCCAACATGGTCAAGTGATTGAAGGTACTTCATTTATGTTTTGACCTCTGATAAAATAAGATTTTGCAGCTTACTCCAATTACGTGGTTCATGGAGCCTATAAAATTGATGTGCCCTAAACAAGAAAAACAAATTAACTAAACAATGATGTGTAACTCGTGCAGCTAGAGTTATTTTTGATCGTGACAGTGGGAGATCCAGAGGGTTTGGTTTTGTTACTTATACATCTGCTGAAGAAGCATCAAGTGCCCTGAGTGCCTTGGATGGCCAGGTAATGATGCCCAGGTTTCTTTGTGACCGGTCAGTTCTTCTCGAAGAGTGATATTTCTTGTTTTTGGTATCACTTTGTGTAGTCAAGAGTGTCAGGCAAGTTATGTTATTTTCCTAAAGATGCTATCCATCTTAGTCCACTCCATCAATGATGGTTCCCATCTAATAGGTTCTATTACATGAAAATTTTGCAACTTCATGTTATTGTGCCTTTCAAAAAATCAAGATCAAATTGCTTCCGGCACTTTCTTACCGCTAAACGAGATGAAATATTTGAACAACTTTTTGAGACCAGTATCAGGTGATAATTTCATGTTGTTCCTTTCGTTTTATTCACCGTATTCCACTGTCAATTACTGGAAGAAATTAATTAGTTAGCCTTAGTGACAGGGTGGTCTTTCCATCTAGTGCTAACCAATAAGGTTCTATTGGGTCAGAAATCCATCAGGACTTCATCTTGTTTTCCCTTTCTTTTATATTATGGACAAATTACATTTTGCTATTTTCTTCCATAATTTGAGAATGAATTTTTTTTTTTTTTGAAAAGCTTTTGGGACTAGTACTGGGTAAAATCTGTTGCGTTACTTTTGCAGGATCTCCACGGGAGACGGATAAGGGTGAATTATGCCACAGAAAAGCGTCCTGGAGGATTCGGGCGTGGTTCTGGTGGTGGAGGTGGATTTAGCTATGGTGGGGGAGCTGGAGGTTACTCATATGGGAATTATGGAGGTGGTGGTAACTATGGTAGCAACAACAGTTACCCTGCAGGTGGTGGCAGCTATGGTGGGGATAGTTTTGGGGCTGGATATGGTGGTGGGAGTAGTGGAAGTTACAACGCTGGTGTTTCCGCTAGTAATGACTTCTTGAACAACTCTGAATTTGGTGGGAGCCCTGGGACCTCGCACAATGGTGGTGAAGAACAGCTTAGTGCAGACCAAGGGACTGAATCTGTAGACAATGATTTCACACCAGGTGTAGAAAGGAGCAGCAGCGACGACAATGATGAGCCAAAGGACTACGCCAACTCGAGGAGTTCATAATACGTCCTCATATGCTATTCACCAACTTTGGGTTTGATGAGTACATGTTCACAATACGTGTTGAGTTAAAAGAAAGTATATTCTATTTCCAGCAGGGTTGCTACTGGTTGAATGCTTCATCTAAGTTTAATCAATCTGTAGGATTACACTCTACTCGTTTCATAAATGTTTTAAGTTCATGGAGCTCTCCAAGTACTGATTTTGTGCAATGTACAGTGCTGAATCTTTTGCT</genome_strand>
        <mrna_strand>GGACTGAACTCACCTGGGTATAAGAAAAAATAAATAAAAAAAATCTTCGAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTAAAGATGGCTTTATTCAATAGAATTGGAAATATGCTTAAACAGAGTGTAAGCAGACACACAAATTTGGAATTGTGTGCCACTAGAACCTCACTTTACCAGGCTATAAGAAGCATGTCTTCTTCAAAGCTTTTTGTTGGAG...........................................................................................GTCTCTCATATGGCACTGATGAGACCTCTCTGCGAGAGGCATTCTCCCAACATGGTCAAGTGATTGAAG............................................................................................................................................CTAGAGTTATTTTTGATCGTGACAGTGGGAGATCCAGAGGGTTTGGTTTTGTTACTTATACATCTGCTGAAGAAGCATCAAGTGCCCTGAGTGCCTTGGATGGCCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTCCACGGGAGACGGATAAGGGTGAATTATGCCACAGAAAAGCGTCCTGGAGGATTCGGGCGTGGTTCTGGTGGTGGAGGTGGATTTAGCTATGGTGGGGGAGCTGGAGGTTACTCATATGGGAATTATGGAGGTGGTGGTAACTATGGTAGCAACAACAGTTACCCTGCAGGTGGTGGCAGCTATGGTGGGGATAGTTTTGGGGCTGGATATGGTGGTGGGAGTAGTGGAAGTTACAACGCTGGTGTTTCCGCTAGTAATGACTTCTTGGACAACTCTGAATTTGGTGGGAGCCCTGGGACCTCGCACAATGGTGGTGAAGAACAGCTTAGTGCAGACCAAGGGACTGAATCTGTAGACAATGATTTCACACCAGGTGTAGAAAGGAGCAGCAGCGACGACAATGATGAGCCAAAGGACTACGCCAACTCGAGGAGTTCATAATACGTCCTCATATGCTATTCACCAACTTTGGGTTTGATGAGTACATGTTCACAATACGTGTTGAGTTAAAAGAAAGTATATTCTATTTCCAGCAGGGTTGCTACTGGTTGAATGCTTCATCTAAGTTTAATCAATCTGTAGGATTACA--CTACTCGTTTCATAAATGTTTTAAGTTCATGGAGCTCTCCAAGTACTGATTTTGTGCAATGTACAGTGCTGAATCTTTCCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0190N21-cHQgB/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U569822" ref_strand="+" ref_description="SGN-U569822 Tomato 200607#2 [17 ESTs aligned] (*GB) gi|157341269|emb|CAO49176.1| (e_value=1e-93) unnamed; (*ATH) AT3G29390.1 (e_value=2e-92) | Symbol: None | hydroxyproline-rich glycoprotein family protein, sequencing discrepancy between cDNA and genomic sequence prevents representation of entire coding sequence | chr3:11290853-11295965 FORWARD | Aliases: MUO10.13; (*SWP) sp|Q9LIA4|RIK_ARATH (e_value=2e-91) Protein RIK OS=Arabidopsis thaliana GN=RIK; ">
      <seq>gattacggattctgaaaaccacaaattcttacaatttgatgaatccaaaatctcaatctgcctgaaaattcaatccttctgccgctccgttgattcagaagaagcgtttcaattgcacgaactagaaatttcttcagcaatgacggaggataattgccctagagtttcatcttctgaaaccgtagactccaattcttcatcgacgaagcaaaggaaacggagaaagtgggatcagcctgcggagacattcgttccagaaggggtagcggtatctgggatttttccattggcaaatactggttctcttgctggtatcacactacctggcgtgattccagtcttgggtgctgcttttacgaatcctcttaccactattggtgctactacagtgcagcagcttcctgtaattattgcccaaaaatcagttcaaccgaaaattcaggatgagttgatagcaagagaaattgtcattaatgatgctgatccgtctgttcgctacaggctcacaaagcgccaaacacaagaagagattcagaagagcacgggtgctgtggttataactaggggtaaatacaagcctccaagcgcaccttctgatggtgaaaaacccctataccttcatatttctgctggggcacatctagaaacaacacttgagaggatcagagcagttgatcgtgctgctgctgtagtggaggaaatgcttaagcaaggtcctgttaacaatggattaaaggttaatcatctgctgagtacttgtgtatacctgggctttgaggctgatccatcagcaaatattactgtgcgcattcgtggaccaaatgatcagtatataaatcacattatgaatgaaactggagcaactgtcttgctaagaggacgtggttcgggatattcagatgaaggacagggagaagatgttcaccaacctctgcatttactcatatcaagcaataacagtgcaagtcttgagcgtgcgaagcttttggcagaaaatcttttggatactatttgtgcagagtgtggtgcttctagagtctcttcttgtaaggtttatggagctgttccgcctccactgcaaccgttagccagcgttcaggtttctggaagtgaatcagaagtcaataacacacccacagccaatgtagctgcacagattttgagctcctcaactgcagcagcagttcccgtgactgcagctgcaggtgggactggtgttgtttctcagggtacagtacctcaatctctaggctcactagatcctgtgccatctcaacctcccaccagttgttatcctcatcaattagttacaagtagaacaagctatattggctatgatggtatatatccccaagccactgctttgcagcaagttgctttggctcttaggcaatctacttctccagtcacttcaacagttcctccagcaacaacgggaccaagcatcacttcacagacaagtacaggttctgagaaggacaagcgccctgcacagaagcgtaaatttcaagaattgccggctggtggaaaaggccaagcaactgtaaaccagaatccactgcaggctacggagcttctaatgcttcaggaacgaatttcagagaaaggtgatacagacaaaattggtattccgactcccagaaagttggttcagcccttatccagttcaatgctgccgccgccacctcctagaatgatgcctccaccgccgccgccaccaaagtttcaatcatcctcacagaaagtgcatgataacaatatggttaacaaagcaccaagtaaaattgtaccagatacattagtccagctaatggaatatggggatgacgacgacgacgataatgatgaagcaattgacggacctttgaaaagtagctcaagtgcggtagcgactccaaagccattctgggctgtttaataatatgaccactgcacatctctgaagattttggcaacagctgaatgtgcattataagttgaatggttgttttcaattgacctggaagtggctgtgaaatataaaatatgtacccttccccaccccagcaaaaagatgtggggccaccaaatggaggaaaagaggaaaggagagttctgtagtattgtgccaatatgataatatcagagtgtaagtgatgctctatgtaaaatgactcgtagaaattccgcaaccttgtatttccattcagaagttgtttgctgctggcttgtagtttcactctgaactctttatgaaacaaagaaatgccagcagtttaacct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0190N21-cHQgB/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0190N21.3" temp_strand="-" temp_description="C02HBa0190N21.3  AC215414.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0190N21 sequenced_by:kribb upload_account_name:korea">
        <position start="50597" stop="42452"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50298" g_stop="50086" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="213" r_length="213" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="50085" i_stop="49271" i_length="815">
            <donor d_prob="0.963" d_score="1.00"/>
            <acceptor a_prob="0.841" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="49270" g_stop="49054" g_length="217"/>
          <reference_exon_boundary r_type="cDNA" r_start="214" r_stop="430" r_length="217" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="49053" i_stop="48637" i_length="417">
            <donor d_prob="0.929" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="48636" g_stop="48538" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="431" r_stop="529" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="48537" i_stop="48430" i_length="108">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="48429" g_stop="48395" g_length="35"/>
          <reference_exon_boundary r_type="cDNA" r_start="530" r_stop="564" r_length="35" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="48394" i_stop="48311" i_length="84">
            <donor d_prob="0.961" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="48310" g_stop="48235" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="565" r_stop="640" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="48234" i_stop="47435" i_length="800">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="47434" g_stop="47339" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="641" r_stop="736" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="47338" i_stop="47263" i_length="76">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.592" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="47262" g_stop="47176" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="737" r_stop="823" r_length="87" r_score="0.989"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="47175" i_stop="46637" i_length="539">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="46636" g_stop="46543" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="824" r_stop="917" r_length="94" r_score="0.989"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="46542" i_stop="46397" i_length="146">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.888" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="46396" g_stop="46279" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="918" r_stop="1035" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="46278" i_stop="46130" i_length="149">
            <donor d_prob="0.793" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="46129" g_stop="45613" g_length="517"/>
          <reference_exon_boundary r_type="cDNA" r_start="1036" r_stop="1552" r_length="517" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="45612" i_stop="43864" i_length="1749">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="43863" g_stop="43623" g_length="241"/>
          <reference_exon_boundary r_type="cDNA" r_start="1553" r_stop="1793" r_length="241" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="43622" i_stop="43224" i_length="399">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="43223" g_stop="42752" g_length="472"/>
          <reference_exon_boundary r_type="cDNA" r_start="1794" r_stop="2262" r_length="469" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0190N21.3" gen_strand="-" ref_id="SGN-U569822" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>2265</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0190N21.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U569822" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50298" e_stop="50086"/>
          <exon e_start="49270" e_stop="49054"/>
          <exon e_start="48636" e_stop="48538"/>
          <exon e_start="48429" e_stop="48395"/>
          <exon e_start="48310" e_stop="48235"/>
          <exon e_start="47434" e_stop="47339"/>
          <exon e_start="47262" e_stop="47176"/>
          <exon e_start="46636" e_stop="46543"/>
          <exon e_start="46396" e_stop="46279"/>
          <exon e_start="46129" e_stop="45613"/>
          <exon e_start="43863" e_stop="43623"/>
          <exon e_start="43223" e_stop="42752"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATTACGGATTCTGAAAACCACAAATTCTTACAATTTGATGAATCCAAAATCTCAATCTGCCTGAAAATTCAATCCTTCTGCCGCTCCGTTGATTCAGAAGAAGCGTTTCAATTGCACGAACTAGAAATTTCTTCAGCAATGACGGAGGATAATTGCCCTAGAGTTTCATCTTCTGAAACCGTAGACTCCAATTCTTCATCGACGAAGCAAAGGTGCATAAAATTTAATCTTAGCTTTTTTTGAAGGCAAATCACTTCAATTGAGATCTAAATTCCCCTTAATATCACCGACTTAGGTCAGAATCAATAGTTTTGATTCATTGTATCTACATTCACTAGTTTGGGATTGAGATAAGTTGATTCATATATTGATTGGTCCCCTCTACTTTTTTTTTGCTGAGAATCCCTTTCCGGAATCCTATTAGCTCAGCTGGTATCATGTGTTAGTAGAATACTACTTTGATTTCTTTCTAAAAAGTAGAAACGAACAGTTACCTAGTTTTAATTAAGCTGCCATGATTAGATACGGGTTTGACCTAACTCAGTAATTAACTTTGGTCCAAACTTTTTTGGCTGAGGAGTTGGATTTTTTGTGTTTATTGAGTTCGTGGTTTCACATGACTCTCTCGCATGATTTTAATCCTTTTGATGTATTATTGGTTCCATGAGTTTGTCAATGTCCTTTTTGCTCTGATGCTAAATTGAAAAAGTTCAGAAACTGAATTAGTACTTTGTTGAGATGAAACTGTTACTCTGCGGGAAGAAGCAGCATTGAGGTGAGGGCAGTAGTAGTATCTTCACCGGGAAGGTTAGCTGTTTTTTAGGAATTTAGAGAATCTGGGTGACTTAATGAATATTAGCTGGTTTGTTAGCATTATGCTGCAGAAGAGGAAAGAGAAATAAGAAACAATAACATACACAATTTGATTGATTGATTAATTAATATTAGAAAAATGATGAGAGACAGCTTTGTAGTCTAATAAGAAGAGTAAGCTCTTCTGGTGGTATAACTTTTCAACATCTTCCAGGAAACGGAGAAAGTGGGATCAGCCTGCGGAGACATTCGTTCCAGAAGGGGTAGCGGTATCTGGGATTTTTCCATTGGCAAATACTGGTTCTCTTGCTGGTATCACACTACCTGGCGTGATTCCAGTCTTGGGTGCTGCTTTTACGAATCCTCTTACCACTATTGGTGCTACTACAGTGCAGCAGCTTCCTGTAATTATTGCCCAAAAATCAGTTCAAGTAAGATCATCAGAGAAGATGCTGCTTATTATTTTCTAGTTTGGAAGTATTCCCCTATTACATGAGGGTTGTCACCTAGCTGTAGTAGTTATTATCCAAATGCATGATTTACATTCTCCCAATAATTGCTTTTCTTCCTTTTCTTTGTCGGTGGAAGAAATTGTTTTGTTGTCAGTAAGCGTTGCCCAATTATCTGCCTCCTTATATCATCATCAAAAAGAAAAAGTTCTCTGGTTCACTTCCTGCAGTTGTCTTACTGCAAATTAACAGTTAATGTGTTTGTTACCCATCCTAGGAAATTATACTGAATCAGGCATGTTCTTCGTGTCATTTTTCTATTACCCTTCTACGAAATGCTGTTTAGAATCATCTGTTTTTTGTTTGGATCGCTTCTGATTTTCCAATGAGCTATTGCAGCCGAAAATTCAGGATGAGTTGATAGCAAGAGAAATTGTCATTAATGATGCTGATCCGTCTGTTCGCTACAGGCTCACAAAGCGCCAAACACAAGAAGAGGTGAATATTGTTAATGGGTTTTGTAAGACTAAAGATGACTCGAAAAGCAAATGTGATTATCTTAAGGTTATGCTCATTATTATTGATCAGTTATCACTGTTTCTGCAGATTCAGAAGAGCACGGGTGCTGTGGTTATAACTAGGTAGCACACCATGAAGTCTTATTATATTGCTTATTGTTTAGCCTTTATTTACAGTGTGATACTTGTTTATCGTGGCTATTGCAGGGGTAAATACAAGCCTCCAAGCGCACCTTCTGATGGTGAAAAACCCCTATACCTTCATATTTCTGCTGGGGCACATGTAAGCAATTTTAGTTACTTGCATTTGGATGCACCATTTGGTTCAGGAAGATTGCTGATAAAGTTTTGTCCATCACTAAATTGCATAGATGAATCATTTTTCTGTGCATTATTAATTAATTAATACATTTGCCTTAGTGTCAACTTGTTTCTCTGAGTTTGGTTTCTGCGTTTTCTAACCATTGAAGTGGTTACCACCAATATTCTTCTGCTCATCTTCTCTAGTTAAGAGTTCATTTACTGCTATTTTTCCCCCCGTTTTTATCCAATGTATACTACACATGACTGGAGAATCTGGAAATATCTTTTCTCTTAAAAAGCAAAACCCAAAACATATTCCCATCTTCTGAACCTTTTCTACGTTTTTTAAAAAATGTCTACACCTTTCATCTATCCAGCCAAAATTCAGTGTAAATGTTTGACCTGGCAAAGTTAGCGAGAGTTGAAAACATAAAAGTATAAGGTACTAATAACCTTTTGCTATCTTAGGAACAACATCAACAACAACATTACCCAGTGAAATCCCACAAAGTGGGGTCTGGGGATGCTATCTTAGGAACAAAATTAAAGAAAAAAGTTGAGTGGAGAAATGTCTCATTTAAGTTTCAGGCTATCTTTTATTTTATAAAACACTTCTCCATGGGAAAATTGTACTTATCTTGGGTCACACTGATGAAAAAATTGTTATTCATTAAAGTGGGACTTCTCTCTGTAACCTTTTCAAGTTTTATTATTTGACCTCTTACTTTGCTGGGTGAAGTGATTGCTGTGGTGTATTTACATGTACTGTGGTTGATTCAGCTAGAAACAACACTTGAGAGGATCAGAGCAGTTGATCGTGCTGCTGCTGTAGTGGAGGAAATGCTTAAGCAAGGTCCTGTTAACAATGGATTAAAGGTAAGTAGTATCTGCTGAGGTTTGACAGGACCTGAAGCCAGAAAATTACTGGAACGTCTGACTCTCTTATCATCAGGTTAATCATCTGCTGAGTACCTGTGTATACCTGGGCTTTGAGGCTGATCCATCAGCAAATATTACTGTGCGCATTCGTGGACCAAATGTGAGCTTTCTTAATCTAACTTTGCTCATTTCTCCTGATTTATTGAGTTATTTTGGTATGTTGCCTATTAAGGGTTAATTTCCTTACATAATTTTCAATTTATGAATTCTCGCATATTTAACTGCATAAAAATTGGATCCTTTGTTTTTTGTGATTTACTATCCATTTGCCTTATCAATTTCTTTTACCTATATGCTGTGATTTGCTGGCAAATTTAAATACCGGGAAGTTCATTCAGCTGTTACTTCTCTGTTATGGATCAGATATTGGCATCATGTATTCTCTTTATTGATCAGATTATGGTCTGAGTAATTATATGATTGTTTCTTCCAGTAGTTTGGGTGTAGTCCATTCTCTACCCTGCCTGGCTAATTATCTTATTTATCTCTTTTGGCATTATGATGCTTGATGTGCTCCTTTAAACTTTATTTTTATTGATAGAAAGCCAAGAGTTTCTAATGTTCTGAGCTCTCTCTGACATCTCCGTCCATTTGGAGAGATTTTCTTCTGTGCTGGTGGTTGGCTTTTTGTAAGTGCAGGATCAGTATATTAATCACATTATGAATGAAACTGGAGCAACTGTCTTGCTAAGAGGACGTGGTTCGGGATATTCAGATGAAGGACAGGGAGAAGGTGCCTATGTGTTGATTAAGATGCAATTATTTTCCCATGCTCCATAGCATGATAAGAATGATTATCAATAGTGTGCCACTGGCTAGATTCCTCAGCTATGAAAAAAGATTAGTTATTCCTCATAAATGTACTCTTTTAACGTGCAGATGTTCACCAACCTCTGCATTTACTCATATCAAGCAATAACAGTGCAAGTCTTGAGCGTGCGAAGCTTTTGGCAGAAAATCTTTTGGATACTATTTGTGCAGAGTGTGGTGCTTCTAGGTATGCATGTTGCTCTGAGTATATGAAATGTGATTGCAGCCTGTTAACTTTCATTCAGAAGAGGTTTTTGTGGGCTGTTATTTTGTTGTGATTCTTTTTCTTTTGTTGGGCTGTCCTGAATTCTCATATGTGTGACTGTCGATCTGCAGAGTCTCTTCTTGTAAGGTTTATGGAGCTGTTCCGCCTCCACTGCAACCGTTAGCCAGCGTTCAGGTTTCTGGAAGTGAATCAGAAGTCAATAACACACCCACAGCCAATGTAGCTGCACAGATTTTGAGCTCCTCAACTGCAGCAGCAGTTCCCGTGACTGCAGCTGCAGGTGGGACTGGTGTTGTTTCTCAGGGTACAGTACCTCAATCTCTAGGCTCACTAGATCCTGTGCCATCTCAACCTCCCACCAGTTGTTATCCTCATCAATTAGTTACAAGTAGAACAAGCTATATTGGCTATGATGGTATATATCCCCAAGCCACTGCTTTGCAGCAAGTTGCTTTGGCTCTTAGGCAATCTACTTCTCCAGTCACTTCAACAGTTCCTCCAGCAACAACGGGACCAAGCATCACTTCACAGACAAGTACAGGTTCTGAGAAGGACAAGCGCCCTGCACAGAAGCGTAAATTTCAAGAATTGCCGGCTGGTGGAAAAGGCCAAGCAACTGTAAACCAGGTATGTGCTTAGTCTCCTTGACCTATACGAAGGTATCTCCAGGCAATTGCCCTTAACTGGCTTTTGATGAGAAAATTATAATGGTCATCTCCGAGTCAAGTACATAAAGCTTCATGATTGATCAGAGACGGGGAATGAATATTGAAAGCATTTCATGTTATAATTTCTGGCATATGAACCTAAACTTGAGTATCCAGAAGTTCCTCTATTATCGCTATCTGCTTGTGGAAGTATCCAACGGGGCACTGGCTGTGCAAAAATTTTTGCTCCAAGCATCCAAGATAAGCCCATCTCTTGGATGAGAACTAAAATGTTAGATGATATCATGTAAACAAAAGAAATAAGATACAAAGGGGGAACTGTAGATATATTAGTACAGCCATTGCTACTGTTCCAACTTAATTTGGTGGAAGATTGAGTGGTACATGTATCACTAATCTGAAATCAAAAACATCTCTAATTACTTCTGTTTAGCCATTCATTGACCACCCACTATGTGGTATCTATCAGATCGACTGCTAGAGTGACAATATAACTGAAGAAAGATGTTGGTTAATGTGAGACAAGTTTCCCCTAGTGGTTGTGACTAGAGGTCACTGAAGTTGTATTGTTTCCCATTCCTCATTTGGAGGGCCTCCACCAAATCACGAAGTTCCTGTGATTTCTCCAAATTTATGCTCTGAAACAAAGCCTTCATAAACATTGGTGCTATGTGGCGTATCTATAGCCTGTGCATCTGCCTTTTTATATCTTAAGTTGTGTCCCTTAATTGCCTTTAATTGATTCTCACTGCTTGAGTGATCTTCTGCACAGGACTATGCTGTGTATATGAATTATGATAGATTCTTCACTTCACCTTCCACTATATAAATGGTATTAATAGAAGGATGAAGTACACCTTGTGTAGCATGATGACTGGCAAAATTGGGATTTATCAGATTCTCTTATTTTTGGGTCTCTTTTAAACTTAGTTTACCATTCATCCTACATCTTAGTTTCTATTAAAATAAGACTTCGTTGTCTCTCATTTTAAATTTTCATCTCATTGCTGTTGTATATGGAGCGTTTGAAATTTCTCAAATTTCTTCCCTTGAGATATTTTTCAGTTATAAAACATATACTAATTTCTGGTCTAACCTTTTCTACTTGATATTCCAGGTAATTTCTCTGACCTTGTATGAAGCTAACAGGCTGTGGAACTCTGTTGGACCTTTGTATGTTTCACAGGATTCTGGATACGGAGGAGGCATGGGGTTGCTACGTGCAATTTCAGTGTTATGGTGCCGATGCAAAGATGCCATGCCCTTCTGGTTTAGGCATTTTGTTAAATGTTAATATGCTAATATGAAATGCACATTTTTAATCAACTTTGCTTCAAGTACTAAAAGGGTAATGAGATCGAGCTCACAGTACATTCTGCCTGTGAGGCTTTCAAACTGTTTCAACTTTACTCTAGAAGATAAAATGTTTTCTATTGGTATCTGCAATATATGCATTTTCTAAACATGTTGATCTAAGCTCCTTGTAACAAGTGAGAGAAAAAAAAGTCAAGCTGCATCTTACACGATTGAGTCCAATTTATTCATGTCAACCAATAACTCTTATGATCATGCATTTATTTTGAACTTCCCTTGCCTGCTACTATACAAGTAAAAGAATGTTCTCGAAAAACTCAAAACTTTTACCTCCTTTTTTCCTGGAATTTCTAAGTTTTCTGGATGGACTCCCCCTCCCCCTTCTGGTTGACAGAATCCACTGCAGGCTACGGAGCTTCTAATGCTTCAGGAACGAATTTCAGAGAAAGGTGATACAGACAAAATTGGTATTCCGACTCCCAGAAAGTTGGTTCAGCCCTTATCCAGTTCAATGCTGCCGCCGCCACCTCCTAGAATGATGCCTCCACCGCCGCCGCCACCAAAGTTTCAATCATCCTCACAGAAAGTGCATGATAACAATATGGTTAACAAAGCACCAAGTAAAATTGTACCAGGTATTTGCCATCACTCAAGCTTTTTCAGTCTCAAGATTTCAATGAACTCTTGCTTGGTTTGTCTATTAGCGATGGCCTACCTATCCTCATTACCCCTTTTTTTCTTGCATTTCTTGTTACTAAGTGGAAGTGTGAAAATCCATTGAGTCCTATTAACATAGTAGAACTTATTTTACTTTCTATTTTTATCTTCCACTTCTTATTTTTGTATTATATCAGCATGAAATAAGCTTAAATGGGTGGAAGTTCACTGAAGATCTATACAAGAGACCCCAAGTAGCTTAGGATTGAGGCCTTGTAGTAGTAGTTGTTATCAGACATAACTTGTCTATTTCATTTTTACAGTTGAGAAATATGAGAGTGTTTGTATACTTGTTTGATTTGATTTGTGCATCTCAGATACATTAGTCCAGCTAATGGAATACGGGGATGACGACGACGACGACGATAATGATGAAGCAATTGACGGACCTTTGAAAAGTAGCTCAAGTGCGGTAGCGACTCCAAAGCCATTCTGGGCTGTTTAATAATATGACCACTGCACATCTCTGAAGATTTTGGCAACAGCTGAATGTGCATTATAAGTTGAATGGTTGTTTTCAATTGACCTGGAAGTGGCTGTGAAATATAAAATATGTACCCTTCCCCACCCCAGCAAAAAGATGTGGGGCCACCAAATGGAGGAAAAGAGGAAAGGAGAGTTCTGTAGTATTGTGCCAATCTGATAATATCAGAGTGTAAGTGATGCTCTATGTAAAATGACTCGTAGAAATTCCGCAACCTTGTATTTCCATTCAGAAGTTGTTTGCTGCTGGCTTGTAGTTTCACTCTGAACTCTTTATGAAACAAAGAAATGCCAGCAGTTTAACCT</genome_strand>
        <mrna_strand>GATTACGGATTCTGAAAACCACAAATTCTTACAATTTGATGAATCCAAAATCTCAATCTGCCTGAAAATTCAATCCTTCTGCCGCTCCGTTGATTCAGAAGAAGCGTTTCAATTGCACGAACTAGAAATTTCTTCAGCAATGACGGAGGATAATTGCCCTAGAGTTTCATCTTCTGAAACCGTAGACTCCAATTCTTCATCGACGAAGCAAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAACGGAGAAAGTGGGATCAGCCTGCGGAGACATTCGTTCCAGAAGGGGTAGCGGTATCTGGGATTTTTCCATTGGCAAATACTGGTTCTCTTGCTGGTATCACACTACCTGGCGTGATTCCAGTCTTGGGTGCTGCTTTTACGAATCCTCTTACCACTATTGGTGCTACTACAGTGCAGCAGCTTCCTGTAATTATTGCCCAAAAATCAGTTCAA.................................................................................................................................................................................................................................................................................................................................................................................................................................CCGAAAATTCAGGATGAGTTGATAGCAAGAGAAATTGTCATTAATGATGCTGATCCGTCTGTTCGCTACAGGCTCACAAAGCGCCAAACACAAGAAGAG............................................................................................................ATTCAGAAGAGCACGGGTGCTGTGGTTATAACTAG....................................................................................GGGTAAATACAAGCCTCCAAGCGCACCTTCTGATGGTGAAAAACCCCTATACCTTCATATTTCTGCTGGGGCACAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGAAACAACACTTGAGAGGATCAGAGCAGTTGATCGTGCTGCTGCTGTAGTGGAGGAAATGCTTAAGCAAGGTCCTGTTAACAATGGATTAAAG............................................................................GTTAATCATCTGCTGAGTACTTGTGTATACCTGGGCTTTGAGGCTGATCCATCAGCAAATATTACTGTGCGCATTCGTGGACCAAAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGTATATAAATCACATTATGAATGAAACTGGAGCAACTGTCTTGCTAAGAGGACGTGGTTCGGGATATTCAGATGAAGGACAGGGAGAAG..................................................................................................................................................ATGTTCACCAACCTCTGCATTTACTCATATCAAGCAATAACAGTGCAAGTCTTGAGCGTGCGAAGCTTTTGGCAGAAAATCTTTTGGATACTATTTGTGCAGAGTGTGGTGCTTCTAG.....................................................................................................................................................AGTCTCTTCTTGTAAGGTTTATGGAGCTGTTCCGCCTCCACTGCAACCGTTAGCCAGCGTTCAGGTTTCTGGAAGTGAATCAGAAGTCAATAACACACCCACAGCCAATGTAGCTGCACAGATTTTGAGCTCCTCAACTGCAGCAGCAGTTCCCGTGACTGCAGCTGCAGGTGGGACTGGTGTTGTTTCTCAGGGTACAGTACCTCAATCTCTAGGCTCACTAGATCCTGTGCCATCTCAACCTCCCACCAGTTGTTATCCTCATCAATTAGTTACAAGTAGAACAAGCTATATTGGCTATGATGGTATATATCCCCAAGCCACTGCTTTGCAGCAAGTTGCTTTGGCTCTTAGGCAATCTACTTCTCCAGTCACTTCAACAGTTCCTCCAGCAACAACGGGACCAAGCATCACTTCACAGACAAGTACAGGTTCTGAGAAGGACAAGCGCCCTGCACAGAAGCGTAAATTTCAAGAATTGCCGGCTGGTGGAAAAGGCCAAGCAACTGTAAACCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCCACTGCAGGCTACGGAGCTTCTAATGCTTCAGGAACGAATTTCAGAGAAAGGTGATACAGACAAAATTGGTATTCCGACTCCCAGAAAGTTGGTTCAGCCCTTATCCAGTTCAATGCTGCCGCCGCCACCTCCTAGAATGATGCCTCCACCGCCGCCGCCACCAAAGTTTCAATCATCCTCACAGAAAGTGCATGATAACAATATGGTTAACAAAGCACCAAGTAAAATTGTACCAG...............................................................................................................................................................................................................................................................................................................................................................................................................ATACATTAGTCCAGCTAATGGAATATGGGGAT---GACGACGACGACGATAATGATGAAGCAATTGACGGACCTTTGAAAAGTAGCTCAAGTGCGGTAGCGACTCCAAAGCCATTCTGGGCTGTTTAATAATATGACCACTGCACATCTCTGAAGATTTTGGCAACAGCTGAATGTGCATTATAAGTTGAATGGTTGTTTTCAATTGACCTGGAAGTGGCTGTGAAATATAAAATATGTACCCTTCCCCACCCCAGCAAAAAGATGTGGGGCCACCAAATGGAGGAAAAGAGGAAAGGAGAGTTCTGTAGTATTGTGCCAATATGATAATATCAGAGTGTAAGTGATGCTCTATGTAAAATGACTCGTAGAAATTCCGCAACCTTGTATTTCCATTCAGAAGTTGTTTGCTGCTGGCTTGTAGTTTCACTCTGAACTCTTTATGAAACAAAGAAATGCCAGCAGTTTAACCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0190N21-cHQgB/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U595371" ref_strand="+" ref_description="SGN-U595371 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>tgttcacagacaagtacaggttctgagaaggacaagcgccctgcacagaagcgtaaatttcaagaattgccggctggtggaaaaggccaagcaactgtaaaccaggtaatttctctgaccttgtatgaagctaacaggctgcggaactctgttggacctttgtatgtttcacaggattctggatacggaggaggcatggggttgctacgtgcaatttcagtgttatggtgccgatgcaaagatgccatgcccttctggtttaggcattttgttaaatgttaatatgctaatatgaaatgcacatttttaatcaactttgcttcaagtactaaaagggtaatgagatcgagctcacagtacattctgcctgtgaggctttcaaactgtttcaactttactctagaagataaaatgttttctattggtatctgcaatatatgcattttctaaacatgttgatctaagctccttgtaacaagtgagagaaaaaaaagtcaagctgcatcttacacgattgagtccaatttattcatgtcaaccaataactcttatgatcatgcatttattttgaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0190N21-cHQgB/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0190N21.3" temp_strand="-" temp_description="C02HBa0190N21.3  AC215414.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0190N21 sequenced_by:kribb upload_account_name:korea">
        <position start="46015" stop="43687"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45717" g_stop="45613" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="105" r_length="105" r_score="0.981"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="45612" i_stop="44455" i_length="1158">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="44454" g_stop="43987" g_length="468"/>
          <reference_exon_boundary r_type="cDNA" r_start="106" r_stop="573" r_length="468" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0190N21.3" gen_strand="-" ref_id="SGN-U595371" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>573</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0190N21.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U595371" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45717" e_stop="45613"/>
          <exon e_start="44454" e_stop="43987"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTTCACAGACAAGTACAGGTTCTGAGAAGGACAAGCGCCCTGCACAGAAGCGTAAATTTCAAGAATTGCCGGCTGGTGGAAAAGGCCAAGCAACTGTAAACCAGGTATGTGCTTAGTCTCCTTGACCTATACGAAGGTATCTCCAGGCAATTGCCCTTAACTGGCTTTTGATGAGAAAATTATAATGGTCATCTCCGAGTCAAGTACATAAAGCTTCATGATTGATCAGAGACGGGGAATGAATATTGAAAGCATTTCATGTTATAATTTCTGGCATATGAACCTAAACTTGAGTATCCAGAAGTTCCTCTATTATCGCTATCTGCTTGTGGAAGTATCCAACGGGGCACTGGCTGTGCAAAAATTTTTGCTCCAAGCATCCAAGATAAGCCCATCTCTTGGATGAGAACTAAAATGTTAGATGATATCATGTAAACAAAAGAAATAAGATACAAAGGGGGAACTGTAGATATATTAGTACAGCCATTGCTACTGTTCCAACTTAATTTGGTGGAAGATTGAGTGGTACATGTATCACTAATCTGAAATCAAAAACATCTCTAATTACTTCTGTTTAGCCATTCATTGACCACCCACTATGTGGTATCTATCAGATCGACTGCTAGAGTGACAATATAACTGAAGAAAGATGTTGGTTAATGTGAGACAAGTTTCCCCTAGTGGTTGTGACTAGAGGTCACTGAAGTTGTATTGTTTCCCATTCCTCATTTGGAGGGCCTCCACCAAATCACGAAGTTCCTGTGATTTCTCCAAATTTATGCTCTGAAACAAAGCCTTCATAAACATTGGTGCTATGTGGCGTATCTATAGCCTGTGCATCTGCCTTTTTATATCTTAAGTTGTGTCCCTTAATTGCCTTTAATTGATTCTCACTGCTTGAGTGATCTTCTGCACAGGACTATGCTGTGTATATGAATTATGATAGATTCTTCACTTCACCTTCCACTATATAAATGGTATTAATAGAAGGATGAAGTACACCTTGTGTAGCATGATGACTGGCAAAATTGGGATTTATCAGATTCTCTTATTTTTGGGTCTCTTTTAAACTTAGTTTACCATTCATCCTACATCTTAGTTTCTATTAAAATAAGACTTCGTTGTCTCTCATTTTAAATTTTCATCTCATTGCTGTTGTATATGGAGCGTTTGAAATTTCTCAAATTTCTTCCCTTGAGATATTTTTCAGTTATAAAACATATACTAATTTCTGGTCTAACCTTTTCTACTTGATATTCCAGGTAATTTCTCTGACCTTGTATGAAGCTAACAGGCTGTGGAACTCTGTTGGACCTTTGTATGTTTCACAGGATTCTGGATACGGAGGAGGCATGGGGTTGCTACGTGCAATTTCAGTGTTATGGTGCCGATGCAAAGATGCCATGCCCTTCTGGTTTAGGCATTTTGTTAAATGTTAATATGCTAATATGAAATGCACATTTTTAATCAACTTTGCTTCAAGTACTAAAAGGGTAATGAGATCGAGCTCACAGTACATTCTGCCTGTGAGGCTTTCAAACTGTTTCAACTTTACTCTAGAAGATAAAATGTTTTCTATTGGTATCTGCAATATATGCATTTTCTAAACATGTTGATCTAAGCTCCTTGTAACAAGTGAGAGAAAAAAAAGTCAAGCTGCATCTTACACGATTGAGTCCAATTTATTCATGTCAACCAATAACTCTTATGATCATGCATTTATTTTGAAC</genome_strand>
        <mrna_strand>TGTTCACAGACAAGTACAGGTTCTGAGAAGGACAAGCGCCCTGCACAGAAGCGTAAATTTCAAGAATTGCCGGCTGGTGGAAAAGGCCAAGCAACTGTAAACCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAATTTCTCTGACCTTGTATGAAGCTAACAGGCTGCGGAACTCTGTTGGACCTTTGTATGTTTCACAGGATTCTGGATACGGAGGAGGCATGGGGTTGCTACGTGCAATTTCAGTGTTATGGTGCCGATGCAAAGATGCCATGCCCTTCTGGTTTAGGCATTTTGTTAAATGTTAATATGCTAATATGAAATGCACATTTTTAATCAACTTTGCTTCAAGTACTAAAAGGGTAATGAGATCGAGCTCACAGTACATTCTGCCTGTGAGGCTTTCAAACTGTTTCAACTTTACTCTAGAAGATAAAATGTTTTCTATTGGTATCTGCAATATATGCATTTTCTAAACATGTTGATCTAAGCTCCTTGTAACAAGTGAGAGAAAAAAAAGTCAAGCTGCATCTTACACGATTGAGTCCAATTTATTCATGTCAACCAATAACTCTTATGATCATGCATTTATTTTGAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0190N21-cHQgB/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U595373" ref_strand="+" ref_description="SGN-U595373 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>tcgcctccactgcaaccgttagccagcgttcaggtttctggaagtgaatcagaagtcaataacacacccacagccaatgtagctgcaccgattttgagctcctcgacagcagcagcagttcccatgactgcagctgcaggtgggactggaattgtttctcagggtacagtacctcaatctctaggctcactggatcctgtgccatctcaacctcccaccagttgttatcctcatcaattagttacaagtagaacaagctatattggctatgatggtatatatccccaagccactgctttgcagcaagttgctttggctcttaggcaatctacttctccagtcactacaacagttcctccagcaacaacgggaccaagcatcacttcacagacaagtacaggttctgagaaggacaagcgccctgcacagaagcgtaaatttcaagaattgccggctggtggaaaaggccaagcaactataaaccaggtaatttctctgaccttgtatgaagctaacaggctgtggaactctgttggacctttgtatgtttcacaggattctggatacggaggaggcatggggttgctacgtgcaatttcagttttatggtgccgatgcaaagatgccatgcccttctggtttaggcattctgttaaatgttaatatgctaatatgaaatgcacattattaatcaactttgcttcaagtactaaaagggtaatgagatcgagctcacaatacattctgcctgtgaggctttcaaactgtttcaactttactctagaagatgaaatgttttctattggtatctgcaatatatgcattttctaaacatgttga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0190N21-cHQgB/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0190N21.3" temp_strand="-" temp_description="C02HBa0190N21.3  AC215414.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0190N21 sequenced_by:kribb upload_account_name:korea">
        <position start="46397" stop="43801"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46098" g_stop="45613" g_length="486"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="486" r_length="486" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="45612" i_stop="44455" i_length="1158">
            <donor d_prob="0.988" d_score="0.98"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="44454" g_stop="44101" g_length="354"/>
          <reference_exon_boundary r_type="cDNA" r_start="487" r_stop="840" r_length="354" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0190N21.3" gen_strand="-" ref_id="SGN-U595373" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>840</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0190N21.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U595373" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46098" e_stop="45613"/>
          <exon e_start="44454" e_stop="44101"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGCCTCCACTGCAACCGTTAGCCAGCGTTCAGGTTTCTGGAAGTGAATCAGAAGTCAATAACACACCCACAGCCAATGTAGCTGCACAGATTTTGAGCTCCTCAACTGCAGCAGCAGTTCCCGTGACTGCAGCTGCAGGTGGGACTGGTGTTGTTTCTCAGGGTACAGTACCTCAATCTCTAGGCTCACTAGATCCTGTGCCATCTCAACCTCCCACCAGTTGTTATCCTCATCAATTAGTTACAAGTAGAACAAGCTATATTGGCTATGATGGTATATATCCCCAAGCCACTGCTTTGCAGCAAGTTGCTTTGGCTCTTAGGCAATCTACTTCTCCAGTCACTTCAACAGTTCCTCCAGCAACAACGGGACCAAGCATCACTTCACAGACAAGTACAGGTTCTGAGAAGGACAAGCGCCCTGCACAGAAGCGTAAATTTCAAGAATTGCCGGCTGGTGGAAAAGGCCAAGCAACTGTAAACCAGGTATGTGCTTAGTCTCCTTGACCTATACGAAGGTATCTCCAGGCAATTGCCCTTAACTGGCTTTTGATGAGAAAATTATAATGGTCATCTCCGAGTCAAGTACATAAAGCTTCATGATTGATCAGAGACGGGGAATGAATATTGAAAGCATTTCATGTTATAATTTCTGGCATATGAACCTAAACTTGAGTATCCAGAAGTTCCTCTATTATCGCTATCTGCTTGTGGAAGTATCCAACGGGGCACTGGCTGTGCAAAAATTTTTGCTCCAAGCATCCAAGATAAGCCCATCTCTTGGATGAGAACTAAAATGTTAGATGATATCATGTAAACAAAAGAAATAAGATACAAAGGGGGAACTGTAGATATATTAGTACAGCCATTGCTACTGTTCCAACTTAATTTGGTGGAAGATTGAGTGGTACATGTATCACTAATCTGAAATCAAAAACATCTCTAATTACTTCTGTTTAGCCATTCATTGACCACCCACTATGTGGTATCTATCAGATCGACTGCTAGAGTGACAATATAACTGAAGAAAGATGTTGGTTAATGTGAGACAAGTTTCCCCTAGTGGTTGTGACTAGAGGTCACTGAAGTTGTATTGTTTCCCATTCCTCATTTGGAGGGCCTCCACCAAATCACGAAGTTCCTGTGATTTCTCCAAATTTATGCTCTGAAACAAAGCCTTCATAAACATTGGTGCTATGTGGCGTATCTATAGCCTGTGCATCTGCCTTTTTATATCTTAAGTTGTGTCCCTTAATTGCCTTTAATTGATTCTCACTGCTTGAGTGATCTTCTGCACAGGACTATGCTGTGTATATGAATTATGATAGATTCTTCACTTCACCTTCCACTATATAAATGGTATTAATAGAAGGATGAAGTACACCTTGTGTAGCATGATGACTGGCAAAATTGGGATTTATCAGATTCTCTTATTTTTGGGTCTCTTTTAAACTTAGTTTACCATTCATCCTACATCTTAGTTTCTATTAAAATAAGACTTCGTTGTCTCTCATTTTAAATTTTCATCTCATTGCTGTTGTATATGGAGCGTTTGAAATTTCTCAAATTTCTTCCCTTGAGATATTTTTCAGTTATAAAACATATACTAATTTCTGGTCTAACCTTTTCTACTTGATATTCCAGGTAATTTCTCTGACCTTGTATGAAGCTAACAGGCTGTGGAACTCTGTTGGACCTTTGTATGTTTCACAGGATTCTGGATACGGAGGAGGCATGGGGTTGCTACGTGCAATTTCAGTGTTATGGTGCCGATGCAAAGATGCCATGCCCTTCTGGTTTAGGCATTTTGTTAAATGTTAATATGCTAATATGAAATGCACATTTTTAATCAACTTTGCTTCAAGTACTAAAAGGGTAATGAGATCGAGCTCACAGTACATTCTGCCTGTGAGGCTTTCAAACTGTTTCAACTTTACTCTAGAAGATAAAATGTTTTCTATTGGTATCTGCAATATATGCATTTTCTAAACATGTTGA</genome_strand>
        <mrna_strand>TCGCCTCCACTGCAACCGTTAGCCAGCGTTCAGGTTTCTGGAAGTGAATCAGAAGTCAATAACACACCCACAGCCAATGTAGCTGCACCGATTTTGAGCTCCTCGACAGCAGCAGCAGTTCCCATGACTGCAGCTGCAGGTGGGACTGGAATTGTTTCTCAGGGTACAGTACCTCAATCTCTAGGCTCACTGGATCCTGTGCCATCTCAACCTCCCACCAGTTGTTATCCTCATCAATTAGTTACAAGTAGAACAAGCTATATTGGCTATGATGGTATATATCCCCAAGCCACTGCTTTGCAGCAAGTTGCTTTGGCTCTTAGGCAATCTACTTCTCCAGTCACTACAACAGTTCCTCCAGCAACAACGGGACCAAGCATCACTTCACAGACAAGTACAGGTTCTGAGAAGGACAAGCGCCCTGCACAGAAGCGTAAATTTCAAGAATTGCCGGCTGGTGGAAAAGGCCAAGCAACTATAAACCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAATTTCTCTGACCTTGTATGAAGCTAACAGGCTGTGGAACTCTGTTGGACCTTTGTATGTTTCACAGGATTCTGGATACGGAGGAGGCATGGGGTTGCTACGTGCAATTTCAGTTTTATGGTGCCGATGCAAAGATGCCATGCCCTTCTGGTTTAGGCATTCTGTTAAATGTTAATATGCTAATATGAAATGCACATTATTAATCAACTTTGCTTCAAGTACTAAAAGGGTAATGAGATCGAGCTCACAATACATTCTGCCTGTGAGGCTTTCAAACTGTTTCAACTTTACTCTAGAAGATGAAATGTTTTCTATTGGTATCTGCAATATATGCATTTTCTAAACATGTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0190N21-cHQgB/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U595372" ref_strand="+" ref_description="SGN-U595372 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>gactatgctgtgtatatgaattatgatagattcttcacttcaccttccactatataaatggtattaatagaaggatgaagtacaccttgtgtagcatgatgactggcaaaattgggatttatcagattctcttatttttgggtctcttttaaacttagtttaccattcatcctacatcttagtttctattaaaaaaagacttcgttgtctctcattttaaattttcatctcattgctgttgtatatggagcgtttgaaatttctcaaatttcttcccttgagatatttttcagttataaaacatatactcatttctggtctaaccttttctacttgatattccaggtaatttctctgaccttgtatgaagctaacaggctgtggaactctgttggacctttgtatgtttcacaggattctggata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0190N21-cHQgB/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0190N21.3" temp_strand="-" temp_description="C02HBa0190N21.3  AC215414.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0190N21 sequenced_by:kribb upload_account_name:korea">
        <position start="45099" stop="44075"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44799" g_stop="44375" g_length="425"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="425" r_length="425" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0190N21.3" gen_strand="-" ref_id="SGN-U595372" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>425</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0190N21.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U595372" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44799" e_stop="44375"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACTATGCTGTGTATATGAATTATGATAGATTCTTCACTTCACCTTCCACTATATAAATGGTATTAATAGAAGGATGAAGTACACCTTGTGTAGCATGATGACTGGCAAAATTGGGATTTATCAGATTCTCTTATTTTTGGGTCTCTTTTAAACTTAGTTTACCATTCATCCTACATCTTAGTTTCTATTAAAATAAGACTTCGTTGTCTCTCATTTTAAATTTTCATCTCATTGCTGTTGTATATGGAGCGTTTGAAATTTCTCAAATTTCTTCCCTTGAGATATTTTTCAGTTATAAAACATATACTAATTTCTGGTCTAACCTTTTCTACTTGATATTCCAGGTAATTTCTCTGACCTTGTATGAAGCTAACAGGCTGTGGAACTCTGTTGGACCTTTGTATGTTTCACAGGATTCTGGATA</genome_strand>
        <mrna_strand>GACTATGCTGTGTATATGAATTATGATAGATTCTTCACTTCACCTTCCACTATATAAATGGTATTAATAGAAGGATGAAGTACACCTTGTGTAGCATGATGACTGGCAAAATTGGGATTTATCAGATTCTCTTATTTTTGGGTCTCTTTTAAACTTAGTTTACCATTCATCCTACATCTTAGTTTCTATTAAAAAAAGACTTCGTTGTCTCTCATTTTAAATTTTCATCTCATTGCTGTTGTATATGGAGCGTTTGAAATTTCTCAAATTTCTTCCCTTGAGATATTTTTCAGTTATAAAACATATACTCATTTCTGGTCTAACCTTTTCTACTTGATATTCCAGGTAATTTCTCTGACCTTGTATGAAGCTAACAGGCTGTGGAACTCTGTTGGACCTTTGTATGTTTCACAGGATTCTGGATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0190N21-cHQgB/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U569823" ref_strand="+" ref_description="SGN-U569823 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|11994521|dbj|BAB02585.1| (e_value=2e-25) gene_id:MUO10.12~unknown protein [Arabidopsis thaliana]; (*ATH) AT3G29390.1 (e_value=2e-27) | Symbol: None | hydroxyproline-rich glycoprotein family protein, sequencing discrepancy between cDNA and genomic sequence prevents representation of entire coding sequence | chr3:11290853-11295965 FORWARD | Aliases: MUO10.13; (*SWP) sp|Q9LIA4|RIK_ARATH (e_value=1e-26) Protein RIK OS=Arabidopsis thaliana GN=RIK; ">
      <seq>aattggatcctttgttttttgtgatttactatccatttgccttatcaatttcttttacctatatgctgtgatttgctggcaaatttaaataccgggaagttcattcagctgttacttctctgttatggatcagatattggcatcatgtattctctttattgatcagattatggtctgagtaattatgtgattgtttcttccagtagtttgggtgtagtccattctctaccctgcctggctaattatcttatttatctcttttggcattatgatgcttgatgtgctcctttaaactttatttttattgatagaaagccaagagtttctaatgttctgagctctctctgacatctccgtccatttggagagattttcttctgtgctggtggttggctttttgtaagtgcaggatcagtatataaatcacattatgaatgaaactggagcaactgtcttgctaagaggacgtggttcgggatattcagatgaaggacagggagaagatgttcaccaacctctgcatttactcatatcaagcaataacagtgcaagtcttgagcgtgcgaagcttttggcagaaaatcttttggatactatttgtgcagagtgtggtgcttctagagtctcttcttgtaaggtttatggagctgttccgcctccactgcaaccgttagccagcgttcaagttttctggaagtgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0190N21-cHQgB/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0190N21.3" temp_strand="-" temp_description="C02HBa0190N21.3  AC215414.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0190N21 sequenced_by:kribb upload_account_name:korea">
        <position start="47345" stop="45751"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47045" g_stop="46543" g_length="503"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="503" r_length="503" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46542" i_stop="46397" i_length="146">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.888" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46396" g_stop="46279" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="504" r_stop="621" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="46278" i_stop="46130" i_length="149">
            <donor d_prob="0.793" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="46129" g_stop="46051" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="622" r_stop="701" r_length="80" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0190N21.3" gen_strand="-" ref_id="SGN-U569823" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>700</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0190N21.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U569823" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47045" e_stop="46543"/>
          <exon e_start="46396" e_stop="46279"/>
          <exon e_start="46129" e_stop="46051"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTGGATCCTTTGTTTTTTGTGATTTACTATCCATTTGCCTTATCAATTTCTTTTACCTATATGCTGTGATTTGCTGGCAAATTTAAATACCGGGAAGTTCATTCAGCTGTTACTTCTCTGTTATGGATCAGATATTGGCATCATGTATTCTCTTTATTGATCAGATTATGGTCTGAGTAATTATATGATTGTTTCTTCCAGTAGTTTGGGTGTAGTCCATTCTCTACCCTGCCTGGCTAATTATCTTATTTATCTCTTTTGGCATTATGATGCTTGATGTGCTCCTTTAAACTTTATTTTTATTGATAGAAAGCCAAGAGTTTCTAATGTTCTGAGCTCTCTCTGACATCTCCGTCCATTTGGAGAGATTTTCTTCTGTGCTGGTGGTTGGCTTTTTGTAAGTGCAGGATCAGTATATTAATCACATTATGAATGAAACTGGAGCAACTGTCTTGCTAAGAGGACGTGGTTCGGGATATTCAGATGAAGGACAGGGAGAAGGTGCCTATGTGTTGATTAAGATGCAATTATTTTCCCATGCTCCATAGCATGATAAGAATGATTATCAATAGTGTGCCACTGGCTAGATTCCTCAGCTATGAAAAAAGATTAGTTATTCCTCATAAATGTACTCTTTTAACGTGCAGATGTTCACCAACCTCTGCATTTACTCATATCAAGCAATAACAGTGCAAGTCTTGAGCGTGCGAAGCTTTTGGCAGAAAATCTTTTGGATACTATTTGTGCAGAGTGTGGTGCTTCTAGGTATGCATGTTGCTCTGAGTATATGAAATGTGATTGCAGCCTGTTAACTTTCATTCAGAAGAGGTTTTTGTGGGCTGTTATTTTGTTGTGATTCTTTTTCTTTTGTTGGGCTGTCCTGAATTCTCATATGTGTGACTGTCGATCTGCAGAGTCTCTTCTTGTAAGGTTTATGGAGCTGTTCCGCCTCCACTGCAACCGTTAGCCAGCGTTC-AGGTTTCTGGAAGTGAA</genome_strand>
        <mrna_strand>AATTGGATCCTTTGTTTTTTGTGATTTACTATCCATTTGCCTTATCAATTTCTTTTACCTATATGCTGTGATTTGCTGGCAAATTTAAATACCGGGAAGTTCATTCAGCTGTTACTTCTCTGTTATGGATCAGATATTGGCATCATGTATTCTCTTTATTGATCAGATTATGGTCTGAGTAATTATGTGATTGTTTCTTCCAGTAGTTTGGGTGTAGTCCATTCTCTACCCTGCCTGGCTAATTATCTTATTTATCTCTTTTGGCATTATGATGCTTGATGTGCTCCTTTAAACTTTATTTTTATTGATAGAAAGCCAAGAGTTTCTAATGTTCTGAGCTCTCTCTGACATCTCCGTCCATTTGGAGAGATTTTCTTCTGTGCTGGTGGTTGGCTTTTTGTAAGTGCAGGATCAGTATATAAATCACATTATGAATGAAACTGGAGCAACTGTCTTGCTAAGAGGACGTGGTTCGGGATATTCAGATGAAGGACAGGGAGAAG..................................................................................................................................................ATGTTCACCAACCTCTGCATTTACTCATATCAAGCAATAACAGTGCAAGTCTTGAGCGTGCGAAGCTTTTGGCAGAAAATCTTTTGGATACTATTTGTGCAGAGTGTGGTGCTTCTAG.....................................................................................................................................................AGTCTCTTCTTGTAAGGTTTATGGAGCTGTTCCGCCTCCACTGCAACCGTTAGCCAGCGTTCAAGTTTTCTGGAAGTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0190N21-cHQgB/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U570918" ref_strand="+" ref_description="SGN-U570918 Tomato 200607#2 [5 ESTs aligned] (*GB) gi|157341253|emb|CAO49160.1| (e_value=9e-47) unnamed; ">
      <seq>gaaaagttaaaaaaagtagaacagctttgtgctccgccatagtgctgtacattcagctccccttcaatattcatccattttagttcgctttcagccttttgagagatctgaaaattcaatgagggctcttcgtttgagcgatttcgagtatcaaacatcttctgattgagttcatatcgaattatgaagctttgaatttgattacctagtgaagatatgggcacaagcacattaccagatgcattatttggatctgttcaacagcacactattatttcttcacgcagacaccatgaccctattcgatttgttgctgttaagtcgcattccacgatctatagaaggcgttctgttgggaaaagagttctgttcgcggatgcctgcctctgcaaaccaagacatgttgttttctcgagcatggatgattcaactgaagctctcacagatgatgaggatggtgattcattagggaggagtaaagttgtagggattgatgatgatgaactgttggcaactaggaaatctctatctgatgttcaagccagaaataaaaccattgaaaaggaaagagatcaattgcttgaaaaggtagctcggtctgaggctaaacagaaggagtatttgtccaccgtaatgcatgataaggatttggccatatcagaactagagtcagccaaagctctatttaaccgtaagctagaagagtctttggaggagaaatttaacttggaatctaagttggtcctggcaaaacaagatgctgttgaacttgcggttcaagttgagaagcttgctgagattgcttttcagcaggcaacttctcacatactcgaagatgcacaattacgagtttcagctgctgaagcttctgcagcagaggctgcttttcaaattgaagaacaaataaggactgcctctgacggggccataacctatgttctacaacagtctaaagatgccatagaaaaggctttagctgtagctgagtcatctggagagcatacaacaaatgccatggctgcatttgtagataatatggatcgggatgatgagatcgtaacagtccagtcccagaatatcaagtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0190N21-cHQgB/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0190N21.3" temp_strand="+" temp_description="C02HBa0190N21.3  AC215414.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0190N21 sequenced_by:kribb upload_account_name:korea">
        <position start="54759" stop="57668"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55059" g_stop="55268" g_length="210"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="210" r_length="210" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="55269" i_stop="56308" i_length="1040">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="56309" g_stop="56460" g_length="152"/>
          <reference_exon_boundary r_type="cDNA" r_start="211" r_stop="362" r_length="152" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="56461" i_stop="56540" i_length="80">
            <donor d_prob="0.714" d_score="1.00"/>
            <acceptor a_prob="0.213" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="56541" g_stop="56598" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="363" r_stop="420" r_length="58" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="56599" i_stop="56703" i_length="105">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="56704" g_stop="57368" g_length="665"/>
          <reference_exon_boundary r_type="cDNA" r_start="421" r_stop="1085" r_length="665" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0190N21.3" gen_strand="+" ref_id="SGN-U570918" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1085</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0190N21.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U570918" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55059" e_stop="55268"/>
          <exon e_start="56309" e_stop="56460"/>
          <exon e_start="56541" e_stop="56598"/>
          <exon e_start="56704" e_stop="57368"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAAGTTAAAAAAAGTAGAACAGCTTTGTGCTCCGCCAGAGTGCTGTACATTCAGCTCCCCTTCAATATTCATCCATTTTAGTTCGCTTTCAGCCTTTTGAGAGATCTGAAAATTCAATGAGGGCTCTTCGTTTGAGCGATTTCGAGTATCAAACATCTTCTGATTGAGTTCATATCGAATTATGAAGCTTTGAATTTGATTACCTAGTGTTAGTATTATTTGTGTCTTTCTTATTTTGCTGCATCGCCATTGTTCTTTTTTACCCGTTTTATCTTCATGTTCTTCTTCAGTAGTCTTACATTATTGTTATGCTTGTTCAACAGGTTTAATTTACTTTTATTTGAAGCAAGTATGTTTATGGAATAAAATGGTCCTGAACAGAGCAGAGTGGATACAAAGGAATGAAAGAATTTAAGATTCATAGCTTGTGTATGATCAATAGCCTATAACATTAATGTCATAATTGACGTTAGGATCTTACATTATGGTTATGCTGTTCAACAGGTTCAATTTAATTTGTTGAAGTAGTATGTTTGTGGAACGAAATAGGCCTGATAGAGGAGAGTGGATACAAAGGAGTGAAGGAAATTGAAGATTCATAGCTTGTATATGATCAATAGTCTTTTGACATTAATGTCATAATTGACTTTAGGATCTTACATTATGGTTATGCTGTTCAACAGGTTTAATTTAATTTGTTGAAGTAGTATGTTTATGGAATGAAATGGGCCTAATAGAGGAGAGTGGATACAAAGAAATGAAGGAAATTGAAGATTCATAGCTTGTATATGATCAATAGTCTTTTGACATTAATGTCATAATTGACTTTAGGATCTTTGAAGAAAACTAATGTAGCTTGGAAGTGTACCTTGATTTCTTATAAGTCCCGGAGATCATATCATTACTTGAAACTGGTTGAGTACGGATATTTCTCGTTGGGTAACTTGAGAAATAGTATCCTTTGTGTATCATTTTCTTAGAAGTTAGCTTTAGTTAATAACAGAAATAACTAATCTTATGTTGACCAATAAGAGTTTAGCTCTGAATGTACTTATATATCAAAACCAAGTAACTAATGAACCAAATCAGAATAAGTGCAGTTCCACAACAAATTATTATGTCGGAGTTATGCCATAGAACTTTCATGTAAACAACCCCAACAAGATTGGGATTGAGTTGTAGTAGATTGATTGATTGATGTCATGTTTGTGGAATTGGCCCTTTTATAAATTAGTGATCTCTTGACAGGAAGATATGGGCACAAGCACATTACCAGATGCATTATTTGGATCTGTTCAACAGCACACTATTATTTCTTCACGCAGACACCATGACCCTATTCGATTTGTTGCTGTTAAGTCGCATTCCACGATCTATAGAAGGCGTTCTGTTGGGAAAAGGTTTGATATTATTGTACTGTACAAAGTTTAAAACTTTAGTGATGCAAATAAGGTTAATGGTGACGGTCTTATTATTTCAGAGTTCTGTTCGCGGATGCCTGCCTCTGCAAACCAAGACATGTTGTTTTCTCGAGCATGGTTTACATTTCTATGCCTTCTATCAGTATCATTTTTTTTATTTAACTGAGTTGGGCATTGCCGTATGGGCAACTACTACGATTGAAACTTACTTTGTTACTTCAGGATTATTCAACTGAAGCTCTCACAGATGATGAGGATGGTGATTCATTAGGGAGGAGTAAAGTTGTAGGGATTGATGATGATGAACTGTTGGCAACTAGGAAATCTCTATCTGATGTTCAAGCCAGAAATAAAACCATTGAAAAGGAAAGAGATCAATTGCTTGAAAAGGTAGCTCGGTCTGAGGCTAAACAGAAGGAGTATTTGTCCACCGTAATGCATGATAAGGATTTGGCCATATCAGAACTAGAGTCAGCCAAAGCTCTATTTAACCGTAAGCTAGAAGAGTCTTTGGAGGAGAAATTTAACTTGGAATCTAAGTTGGTCCTGGCAAAACAAGATGCTGTTGAACTTGCGGTTCAAGTTGAGAAGCTTGCTGAGATTGCTTTTCAGCAGGCAACTTCTCACATACTCGAAGATGCACAATTACGAGTTTCAGCTGCTGAAGCTTCTGCAGCAGAGGCTGCTTTTCAAATTGAAGAACAAATAAGGACTGCCTCTGACGGGGCCATAACCTATGTTCTACAACAGTCTAAAGATGCCATAGAAAAGGCTTTAGCTGTAGCTGAGTCATCTGGAGAGCATACAACAAATGCCATGGCTGCATTTGTAGATAATATGGATCGGGATGATGAGATCGTAACAGTCCAGTCCCAGAATATCAAGTT</genome_strand>
        <mrna_strand>GAAAAGTTAAAAAAAGTAGAACAGCTTTGTGCTCCGCCATAGTGCTGTACATTCAGCTCCCCTTCAATATTCATCCATTTTAGTTCGCTTTCAGCCTTTTGAGAGATCTGAAAATTCAATGAGGGCTCTTCGTTTGAGCGATTTCGAGTATCAAACATCTTCTGATTGAGTTCATATCGAATTATGAAGCTTTGAATTTGATTACCTAGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGATATGGGCACAAGCACATTACCAGATGCATTATTTGGATCTGTTCAACAGCACACTATTATTTCTTCACGCAGACACCATGACCCTATTCGATTTGTTGCTGTTAAGTCGCATTCCACGATCTATAGAAGGCGTTCTGTTGGGAAAAG................................................................................AGTTCTGTTCGCGGATGCCTGCCTCTGCAAACCAAGACATGTTGTTTTCTCGAGCATG.........................................................................................................GATGATTCAACTGAAGCTCTCACAGATGATGAGGATGGTGATTCATTAGGGAGGAGTAAAGTTGTAGGGATTGATGATGATGAACTGTTGGCAACTAGGAAATCTCTATCTGATGTTCAAGCCAGAAATAAAACCATTGAAAAGGAAAGAGATCAATTGCTTGAAAAGGTAGCTCGGTCTGAGGCTAAACAGAAGGAGTATTTGTCCACCGTAATGCATGATAAGGATTTGGCCATATCAGAACTAGAGTCAGCCAAAGCTCTATTTAACCGTAAGCTAGAAGAGTCTTTGGAGGAGAAATTTAACTTGGAATCTAAGTTGGTCCTGGCAAAACAAGATGCTGTTGAACTTGCGGTTCAAGTTGAGAAGCTTGCTGAGATTGCTTTTCAGCAGGCAACTTCTCACATACTCGAAGATGCACAATTACGAGTTTCAGCTGCTGAAGCTTCTGCAGCAGAGGCTGCTTTTCAAATTGAAGAACAAATAAGGACTGCCTCTGACGGGGCCATAACCTATGTTCTACAACAGTCTAAAGATGCCATAGAAAAGGCTTTAGCTGTAGCTGAGTCATCTGGAGAGCATACAACAAATGCCATGGCTGCATTTGTAGATAATATGGATCGGGATGATGAGATCGTAACAGTCCAGTCCCAGAATATCAAGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0190N21-cHQgB/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U562688" ref_strand="+" ref_description="SGN-U562688 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|157341253|emb|CAO49160.1| (e_value=1e-76) unnamed; ">
      <seq>ggtatacgaactccgtgcaaatgatgttgagaagttattgcttgagtttcaggaatcaagcagaaaagcagctctacaacaggaggaggaaataaaatcatcattagagaaaatgagaaaagatgctacggagaaaaagaaggcagcttcaaaggcatttaagcttgagctagagaggatgaagactgccattgaagcagcaaaagaaacagcacgttcacaagatgaggcatacacgcgaagatgtgaagcactgcagagatctttaaaagcagctgaagctgcttcaaaaacatggagacaaagagcagaaatggctgaggatttgttactaaggagaagttgttcagaagaaggggatgaggaagctatttatcgagttaatggtggaagaatagattttcttatggatgatgattcactgaaatggaaacttttaactgatggccctcgcaggccaacacctgagtggatggcacggaggatacgctctatccgtcccaggtttccacctaggaaaactcatgtatctgaggtcatgacatcaggatttaaaactttggacttgcctaaacccgatgaagtatggtctattgcccaagaaaagctaaaggaaggagatgcgctcgttgagcatgtgattgagaaagaagttattgaaaagaagaggaaggctttggaacgtgctcttcaacggaagacagttaaatggcaaagaactccagaagaaacaaaattaggtgcagctattcataatctgggacgggtactggacgacagattgcggtcagtaataccagctttcattttgatttgttttctgtataaaagtaattttattaacaatagcagtacaagggggtactgcaaagtacaaaaagaagctggacagtatacaaatattatacaatagcggactcaaacaagtccagaaactcagatgtgctgaatacaggatttccactatgccaatactctctgtaaacacttgtatcttacataggaaatcatctcttttttccctagaaacatcttctatttctttctcgtgatacttcccaaatgatgcataaagttatcaattttcatatctattatcttaaaataaaatcctttaagaatattttactgtcttgaaaagttatatggaaccacgtttattctttgcaaaaaaacttaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0190N21-cHQgB/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0190N21.3" temp_strand="+" temp_description="C02HBa0190N21.3  AC215414.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0190N21 sequenced_by:kribb upload_account_name:korea">
        <position start="57169" stop="59040"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57468" g_stop="58221" g_length="754"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="754" r_length="754" r_score="0.999"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58222" i_stop="58307" i_length="86">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.947" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58308" g_stop="58740" g_length="433"/>
          <reference_exon_boundary r_type="cDNA" r_start="755" r_stop="1182" r_length="428" r_score="0.958"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0190N21.3" gen_strand="+" ref_id="SGN-U562688" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>1187</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0190N21.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U562688" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57468" e_stop="58221"/>
          <exon e_start="58308" e_stop="58740"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTATACGAACTCCGTGCAAATGATGTTGAGAAGTTATTGCTTGAGTTTCAGGAATCAAGCAGAAAAGCAGCTCTACAACAGGAGGAGGAAATAAAATCATCATTAGAGAAAATGAGAAAAGATGCTACGGAGAAAAAGAAGGCAGCTTCAAAGGCATTTAAGCTTGAGCTAGAGAGGATGAAGACTGCCATTGAAGCAGCAAAAGAAACAGCACGTTCACAAGATGAGGCATACACGCGAAGATGTGAAGCACTGCAGAGATCTTTAAAAGCAGCTGAAGCTGCTTCAAAAACATGGAGACAAAGAGCAGAAATGGCTGAGGATTTGTTACTAAGGAGAAGTTGTTCAGAAGAAGGGGATGAGGAAGCTATTTATCGAGTTAATGGTGGAAGAATAGATTTTCTTATGGATGATGATTCACTGAAATGGAAACTTTTAACTGATGGCCCTCGCAGGCCAACACCTGAGTGGATGGCACGGAGGATACGCTCTATCCGTCCCAGGTTTCCACCTAGGAAAACTCATGTATCTGAGGTCATGACATCAGGATTTAAAACTTTGGACTTGCCTAAACCCGATGAAGTATGGTCTATTGCCCAAGAAAAGCTAAAGGAAGGAGATGCGCTCGTTGAGCATGTGATTGAGAAAGAAGTTATTGAAAAGAAGAGGAAGGCTTTGGAACGTGCTCTTCAACGGAAGACAGTTAAATGGCAAAGAACTCCAGAAGAAACAAAATTAGGTGCAGCTATTCATGTCGGATGATCTTACTTTATTTTACTTGCGAATCAGTGTTCCTAAGCGAAATGCTTAATCATTATAATATGACTTGTTGCATGCAGAATCAGGGACGGGTACTGGACGAGAGATTGTGGTCAGTAATACCAGCTTTCATTTTGATCTTTTTTCTGTATAAGATAAAAGTAATTTTATTAACAATAGCAGTACAAGGGGGTACTGCAAAGTACAAAAAGAAGCTGGACAGTATACAAATATTATACAATAGCGAACTCAAACAAGTCCAGAAACTCAGTTGTGGTGAATACAGGATTTCCACTATGCCAATACTCTCTGTAAACACTTGTATCTTACATAGGAAATCATCTCTTTTTTCCCTAGAAACATCTTCTATTTCTCTCTCGTGATACTTCCCAAATGATGTATAAAGTTATCAATTTCCATATCTATTATCTTAAAATAAAATCCTTTGAGAATATTTTACTGTCTTGGAAAGTTATATGGAACCACGTTTATTCTTTGCAAAAAAACTTAAAC</genome_strand>
        <mrna_strand>GGTATACGAACTCCGTGCAAATGATGTTGAGAAGTTATTGCTTGAGTTTCAGGAATCAAGCAGAAAAGCAGCTCTACAACAGGAGGAGGAAATAAAATCATCATTAGAGAAAATGAGAAAAGATGCTACGGAGAAAAAGAAGGCAGCTTCAAAGGCATTTAAGCTTGAGCTAGAGAGGATGAAGACTGCCATTGAAGCAGCAAAAGAAACAGCACGTTCACAAGATGAGGCATACACGCGAAGATGTGAAGCACTGCAGAGATCTTTAAAAGCAGCTGAAGCTGCTTCAAAAACATGGAGACAAAGAGCAGAAATGGCTGAGGATTTGTTACTAAGGAGAAGTTGTTCAGAAGAAGGGGATGAGGAAGCTATTTATCGAGTTAATGGTGGAAGAATAGATTTTCTTATGGATGATGATTCACTGAAATGGAAACTTTTAACTGATGGCCCTCGCAGGCCAACACCTGAGTGGATGGCACGGAGGATACGCTCTATCCGTCCCAGGTTTCCACCTAGGAAAACTCATGTATCTGAGGTCATGACATCAGGATTTAAAACTTTGGACTTGCCTAAACCCGATGAAGTATGGTCTATTGCCCAAGAAAAGCTAAAGGAAGGAGATGCGCTCGTTGAGCATGTGATTGAGAAAGAAGTTATTGAAAAGAAGAGGAAGGCTTTGGAACGTGCTCTTCAACGGAAGACAGTTAAATGGCAAAGAACTCCAGAAGAAACAAAATTAGGTGCAGCTATTCAT......................................................................................AATCTGGGACGGGTACTGGACGACAGATTGCGGTCAGTAATACCAGCTTTCATTTTGATTTGTTTTCTG--T---ATAAAAGTAATTTTATTAACAATAGCAGTACAAGGGGGTACTGCAAAGTACAAAAAGAAGCTGGACAGTATACAAATATTATACAATAGCGGACTCAAACAAGTCCAGAAACTCAGATGTGCTGAATACAGGATTTCCACTATGCCAATACTCTCTGTAAACACTTGTATCTTACATAGGAAATCATCTCTTTTTTCCCTAGAAACATCTTCTATTTCTTTCTCGTGATACTTCCCAAATGATGCATAAAGTTATCAATTTTCATATCTATTATCTTAAAATAAAATCCTTTAAGAATATTTTACTGTCTTGAAAAGTTATATGGAACCACGTTTATTCTTTGCAAAAAAACTTAAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0190N21-cHQgB/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U584475" ref_strand="+" ref_description="SGN-U584475 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|157341253|emb|CAO49160.1| (e_value=7e-151) unnamed; (*ATH) AT1G69830.1 (e_value=9e-111)  Symbol: AMY3 | Encodes a plastid-localized &#945;-amylase. Expression is reduced in the SEX4 mutant. Loss of function mutations show normal diurnal pattern of starch accumulation/degradation. Expression follows circadian rhythms. | chr1:26291944-262... ; (*SWP) sp|P00693|AMY1_HORVU (e_value=2e-80) Alpha-amylase type A isozyme OS=Hordeum vulgare GN=AMY1.1; ">
      <seq>gttcgttggaagagcttaaaggctgtatagaagagatgcataaccaagatcttctggccttaggagatgtcgttttgaaccatcgatgtgctcacaaacagagtccgaatggtgtttggaacatttttggaggcaagcttgcatggggacctgaagcaattgtgtgtgatgacccaaattttcaaggccgtggaaatccttcaagtggtgatatatttcatgccgcaccaaatattgatcattcccaggaatttgtacgacaagatataaaaaagtggctaaattggctccgaaatgatgttggttttgatgggtggcgccttgactttgttaggggcttctcaggagcatatgtgaaagaatatatagaagcatcaaatccagcattttctattggcgagtattgggatagtctcgcttatgaaggtggaaatttgtgttacaaccaagatgcccatcgccaacgcataattaactggatcaatgctactggtgggagctcttcagcattcgatgtcacaacaaagggtatactgcattctgctttgcataaccaatattggaggttaattgatcctcaaggcaagccaaccggagtgatgggatggtggccctcacgtgctgtcacatttttggagaatcatgatactggatccacacagggccactggccatttcctcgggacaagcttactcaaggatatgcatatattttaacccaccctggaacgcctgtaatattttacgatcatttctatgaattttggatccgtgatgtcataaatgagtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0190N21-cHQgB/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0190N21.3" temp_strand="+" temp_description="C02HBa0190N21.3  AC215414.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0190N21 sequenced_by:kribb upload_account_name:korea">
        <position start="59484" stop="68609"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59784" g_stop="59839" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="56" r_length="56" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59840" i_stop="60215" i_length="376">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="60216" g_stop="60260" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="57" r_stop="101" r_length="45" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="60261" i_stop="61237" i_length="977">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.541" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="61238" g_stop="61343" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="102" r_stop="207" r_length="106" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="61344" i_stop="62739" i_length="1396">
            <donor d_prob="0.965" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62740" g_stop="62866" g_length="127"/>
          <reference_exon_boundary r_type="cDNA" r_start="208" r_stop="334" r_length="127" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="62867" i_stop="63561" i_length="695">
            <donor d_prob="0.257" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="63562" g_stop="63677" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="335" r_stop="450" r_length="116" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="63678" i_stop="64028" i_length="351">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="64029" g_stop="64105" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="451" r_stop="527" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="64106" i_stop="64382" i_length="277">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.902" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="64383" g_stop="64517" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="528" r_stop="662" r_length="135" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="64518" i_stop="67377" i_length="2860">
            <donor d_prob="0.760" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="67378" g_stop="67446" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="663" r_stop="731" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="67447" i_stop="68250" i_length="804">
            <donor d_prob="0.575" d_score="1.00"/>
            <acceptor a_prob="0.851" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="68251" g_stop="68309" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="732" r_stop="790" r_length="59" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0190N21.3" gen_strand="+" ref_id="SGN-U584475" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>790</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0190N21.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U584475" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59784" e_stop="59839"/>
          <exon e_start="60216" e_stop="60260"/>
          <exon e_start="61238" e_stop="61343"/>
          <exon e_start="62740" e_stop="62866"/>
          <exon e_start="63562" e_stop="63677"/>
          <exon e_start="64029" e_stop="64105"/>
          <exon e_start="64383" e_stop="64517"/>
          <exon e_start="67378" e_stop="67446"/>
          <exon e_start="68251" e_stop="68309"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTCGTTGGAAGAGCTTAAAGGCTGTATAGAAGAGATGCATAACCAAGATCTTCTGGTCTGTATAAAATTAGTGATTAACTTGTTATTCCTTGCATTTTTAGTCAAATATCTTGTATTCAGACAGTTACCCTGATCCTTTAGTTGAGCATTACATCGTTCTTCTCATGTATTCTTTTTGCATGAACTGAACGTCAACGCAGCTTGAGTATACATGTTAGTGGCTTGCAGTTATGTTTTAGCTTTCGCTAACTAGTAACATATGTCTGTTGCTAATGCATCAAAATAAAATTTGCTATGTTTCTGCTACTAGTGCATATCATGTAATTTATTACAGCAAAGTGGTAATTTTTGAATTATGTAGAGATTATTAAGCTACTGATAGGTGCAGAACAATGTGGTTTATCTTATAGCTGTTCTGCATGTGTTTCCAGGCCTTAGGAGATGTCGTTTTGAACCATCGATGTGCTCACAAACAGGTAATCATTTTCTAAACTACAGTTCTTTTTTCATAATATATCTGAGATTTTGTTAGCTTTGTTTTGTTTGGAAATAAAACGTTTATGAAGGAACCTTTCAGCTCTAGAAGCATGTTGTTCCGGTCCCCCGATATGGATCTAGTTACGGTACACTGCAGCCTGCAATATGAAATCAAATGTTTTTTTCCACAATCTATATTGCTAGTTCGTTAAGAAAGAAGTTGCAATCTCGAGATAAAGTACTTAAAAACTGAAATGATTTTCTGTTTAGATGTCATGCGATACACATAGAGTTCAAATACAATACTAATAAGATAACTACCATTAGAAACTAGGACATGGCTTCCTAATATTACTGGAATGAGAAAACGCAGTTCAAATACAATACTAATAAGATAACTGCCATTAGAAACTAGGACATGGCTTCCTAATATTACTGGAATGAGAAAATGCAAACTACTACAAAGAAATAACTACTGCTGGAATGAGAAACTGCAAATAACCACTACAACAAAATACCTACTTCAAACAACTACCACAATAAACTGTTGGGAGACTAAGGAGTGATAAACAAGTATGAGTTGTTTGGAAGTCATTCTTCGAGTACCTTTCCATTTTTCTTGCTGACAGTGATTTAAATATCATTTAACACAGCATTGTTAACTGTTAAGGTTGTCCAAGTTGTTCAATGTATATAGTTTGCTTTATCTATTACAAAGGTTTTTGTTCCATAATTGCCTATATCCTCTCTGTATGTCTGTATGAAAGAACATATTTGTAAATTAACATTGCCATCTCTACCCAATTTTTTGTGGATGTGTAATTCATCTGCTCCTTGAGATTGTACGTTTTGTATGAAAAAAATATAGAGACTGCTCTGGAGTAGTCACAGATGAACTTACAGGTGTAATGACCCTTTTGACTCAAACTTATACTGCAAGTCTCGATGGGTCTCTCACCCGATTGGCTGATTGTAGAGTCCGAATGGTGTTTGGAACATTTTTGGAGGCAAGCTTGCATGGGGACCTGAAGCAATTGTGTGTGATGACCCAAATTTTCAAGGCCGTGGAAATCCTTCAAGTGGTATAAATTCTCTCCATGATACATAAATGCTCCATATGATATGGGGTCTGTTTGTAAATATCACGTGCTTTATTTCCAGATGTGAAAAGGTTTATATAATATATAAGAACATTAAGATATTAGAGAACTGCTATAACTTCATTCGTGCAATCTTAATGATAATTTATGGAGATACGCTTCCAGCATTTGATACTCCCTTAGTTGTCTATGCAACTGAACAACATACTATCTTTCTGTCACATCTTTGTTCAGTCTTTGAGTAAAGCAACAACCAAAGTTATTCTGTTAATGGGATCCTGTTTGCTGAGCATTGTAAATGCTTGTGTTCTTTTAAATTGTCTAAATCTTTGCTCATATACAATTCTTATTTGTGCCTTGAACCATGTGTTTTTTTTATTATGTTAAGGACTCGGCAAAATATTCTTATATTGTCACATCTTTCCATTGTACTTTCATTTCTGATAACACCAATGTGTATAGCTTCTGCTCATATTTGTTTAGGTATTTGCAAGATTTGATATGCTTATGACAGTGTAGCATGGTGAAGGCGAAGAATTATCTTGAGTTTAGTCCAGTTTTGGTGTTTGACTTTTTTTGAGTTTCCAGGATTCTCTCTAAAATGTTGTTATTCGAGGAAAGGATCAAAATAGTCCCTCTTCTTTGGGTTAAGGCTCAAAGTGATCCTTGAGTTTTCACATGGAGCACTAATAGTCCCTCATGTTTGCAATATTGGGGCACTTTTGGTCCTCCTTCAAAATTTTACCTATTTTTTTGCATTGATTATTCATAACCTATGTATGGGATGTTCAATCGTCATTTTATATATTTAGTAGCAATAACAAATCCATATCAAAGAATGTTAGAAAAAACATAATTTGTTTTGTTTAGTAGAAATCATATTGCAGGTAAAGTTGAGAGGTTCATCACGATAATTTCACGTGCAATAGTATAATTTTTTCTTTTCCTGCAAAGTCATATGTTAAGATGTTCTTAGTTTAGCTGCAGTAATATTTCTACTGAACAAAACAAGGTGTTTTTCTTATCACCTTCTCTCGGATAGAGTTATTATTTCTATTAAATATATAAAAAAACGATTGGACATCCCTTGTATAAAATTTTGGACAAAATTAATGTTAAAAAATAGGCAAAAAATTTTAGGATAGGACCAAAAGGGCACCAATATTGCGAACATCAGGGACTATTAGTGCTCCATGTGAAAACTCAAGGATCATTTTGAGCCTTAACCTGAAGATGAGGGATTATTTTGAGCCTTTCCTCTTGTTATTCACCTGCATCAGATTTGATGAGCTTCATAGACTTCTGAGAATAGACAATTAGTGTTTCCTCTTATATGATTTTTCTGCTTACCCCTTCTTTATCTGTGTTTGAAGTGTAGGTGATATATTTCATGCCGCACCAAATATTGATCATTCCCAGGAATTTGTACGACAAGATATAAAAAAGTGGCTAAATTGGCTCCGAAATGATGTTGGTTTTGATGGGTGGCGCCTTGACTTTGTTAGGTGAAGTTGTAATGCTTGTTGGTTTTAATACTATTGAAATTAGTACTTCGGTCTTCCATTCAAAATACAAGTTCAAGTGTCTGTAAACATATTGACCTTGCATCATACTGGTTAGAAAATTTGAGAAATTAGAAGAATAAAAGTAGAAGTGTTTGGTTGTAATATGTGGTTCTACTGCATCTCCTGTTTGTTCTTTATTCTACTAGCTTTTCCTTTCTGAAATTTGATAGGGCCAGCTGTTAAATTTTTCTCTATTTCTGTCTGCCTGCCTTTCTTTCTGTCTCCCTTAAATGGATGGTGGAAACTAAATGAAGATAAGGTGGAAAGTTGTAGTCATATGTTCGATTCCTCATATAGAATTCTTGAAAATAGTGATCATATATCGTACAACAGATCTCTCGTAGAGCTATTTTTCATACTAATTTTGATCTCCATTGTAATTCATTATCCTTTGGTTATCGCCTAAGAACCAATGTTGTGGCCAGAATGAAAATGTATGGGCCACTTTGAATGAGATGTTAGGAAGAAACTGACATGGCACCGTTATTAATTAATTCCTGGAGTATTTAACTTCTATTTCCGTAGATACTCTGTGATAGTTAAAAGCTGGATGATCTACTCAATCCTTCGAATCTTTCTGCTTGGTAAAACGACTTTTATTACATGTAGTAATACAGGCGCTTTGTTGTCCACAGGGGCTTCTCAGGAGCATATGTGAAAGAATATATAGAAGCATCAAATCCAGCATTTTCTATTGGCGAGTATTGGGATAGTCTCGCTTATGAAGGTGGAAATTTGTGTTACAACCAAGGTGAGATTTATTTAAATGTAACCGTAGATTTGACTATTTAGTCAGAAATATTTTGACATGTGTGGTGCACAGCGTTAGGTTGTGCAACTGATTTTCTCATTTTCTGCAAATTCTTTTAAGTTGGAATTTTGCAATCTGTTCAAGCAAATAGCCAAAGGTGGTTTTTCTCCAGCTATGTGCTAGCCATTGTTCATGTGCTAGCCACTGTTCATGTGCTAGCCACTGTTCATCGTTTGTACTATTTAGGCGTGTCAATGTCCTTAAACATTGAGAGGCTAATCCCACTATGTGGAAATCCACCAGTTCCTTATGATAGTAGATTTGTGTTGTTCTGACTTCTGATGCATCCAGATGCCCATCGCCAACGCATAATTAACTGGATCAATGCTACTGGTGGGAGCTCTTCAGCATTCGATGTCACAACAAAGGTACTTCTATTAGAACATCTTTTGTTTGTAGATTTCTGTATCATACTCCAAGACCAAGAATTATCCCACTAACCTGGGAAATAATAGTTCCCTGTAATCTATTGTCCCACATAATTTACTCGTTAATAAATCAACCTTTAATAATCAATTCATGCTAAGATATCTATAGGTAAATATTTTCATCCTCCTGATTTAGATTTAAATTGCTTCTTCATACTAGTGCAGAAAGGTTTTAATGAGCTTTTCAACCTGTTGGTGAATGATATTTTTCTGGCAGGGTATACTGCATTCTGCTTTGCATAACCAATATTGGAGGTTAATTGATCCTCAAGGCAAGCCAACCGGAGTGATGGGATGGTGGCCCTCACGTGCTGTCACATTTTTGGAGAATCATGATACTGGATCCACACAGGTCCTCTCTCTTTCTTGCTCTAACAAGCGCACACACAAACATACAGATGTACATGCCTACTTGTGCTCTCACTCATTCAGTGAGACATGCTACAACTTAAATGCACTGCCATGGAGGTTGAATATGTCAACATTCACCTTTATAAACCTCTGTTTCAGAGTTTTTGGCCAAAAGCTAAAGTAGATCCGTCTGGTATGCCTTCCACTTTCAAAAATCTTAACAAATTTGGTCCCAAATTTAATTGTCATTTTCGGATAAAGAGACTGTCATGCAAGCAGCACATGAGCACTCTGCTTCTTCTGCTTTGGTTTCTTCTCTTTCCATCTCGGCTCGCAGAATAGGAACAGTATCAGCTTCTGCAGCTTCTCCCACCATTCTTCTTAACTGCCAGCATGATTCAACTGTTCCAACAACGAATCAATCTCCTGTAGCTGGTATATTGAGGGATGAAGCCGAAGGTTCAGGATAACCATAAGTGGGATCTCCATAGTCCATACTCCATCATAAAGAAACTTAAGACCTCATGTCAGAGACATGGAAGTACCAAGGCAGCCCTCTCATACACGTAAATTTAAACTCGCCTTTCACGGCCTCCAGAATTTGAGCACTTCTGTTCTGGAAAAGGAAAGTTTATTGCCGTGAGATTTTCGGTTAAGTGACTGTTGAAACTTGAAAGCATGCTAGGTTCAGACTGGCCCAAAGAAACAAATACACAAATAAATTGCCCAAAGTCTGAAACTTAAGATAATAGTTTCATGCGTAACTAATACTATTTCCTTCTTCATTAGCCTTGGTCAGAACCCTCTGATTGTTGCAAACACCCGGGATGATGATCTCAGGAAACATGTGAAATAGGAGGAGCTGAAAGACATTGAAGCAAACACCTTAGGAATTCAAAAGATCTGAATTTGCATGCCAAACATTTATCAAACCTTACAAAACCAGACTGTTCCATGTCAGCGCATGTATATCCACCTTCATGTGTCAACAACTCCAATGTGAGCAATGAAATTTAGCCTCATAAAATGACTTTTCTGAAACCTTGGTGTTTCCCAGAGGCATGTGTAATGTTTCTCACTGGGGAAAAGGAGCATGAGGATGGGAGAGGCAGAAGTTCTCCTGGAAAAGGGGAAAGGAGAACGTTCACATGAGGTGCACATGACAGTTCTGTTGAAGTTTGACGGAATGTTAAGGTCTTTGCAAAAAGAACTAAATTTTTGGAGACGGAGATGTTATCTGTTAATTATAATTTTAGAGGGAACCACTCAATCTTTTGGCCAACTTGAGGAATGTTTCTGGTAAAATTTTGCTTTGTTCATGGAACACCAAAATCTTGGGGTATTCTGTAGTGTATGTTCCAAATATATATTCTGATAATATAATATTAGATTTTCATATCTGATCCATAAACTTTCAATCTGCAGTTTTATACTCGCATTTGTTGTTGGAAATCTAATAAACGGAGTAGTGAAGCATGAGATTCAGGCTTGAGAGATTTAAAATTCTGAACTTTAAGCTCACCAAGTGATAATGTTTAGTCTATGATGTTGCATACCAAAACAAAACTTGGCGGAAGGATCTATTGAGCATAGATCAGAGTTAGTACCCTAGCTAACCGAGACATGTATTATGGAAGTGCTAGCTAGCAGTTAAGGCTGACTTGATTACCGTCTTATATCTTGGCCTAAATCATTTGATACTTGCCCCCCCCCCCCCCCACCCCACACACACACATACACACTCACACACGCAACCCTACTGCCTCCCTCACATATAGTGGCAGATCTAAGGGTAATTTTTATTTTTGAATTCCTTGATGTAAGAAACACGATAAGTGTAGCGGCTAGGCAATTCAGAAATTGCTTTAGCTTGCAAGTTCCTCCAAGTGTGATATTCTTATGTTCTTTAATCTCCTTGTTAGAATTTCTGGATCCGTCATTACTCACATATGCTCCCATGTTTTACTTACTAATTTTCGATTGCACTGTCCTACATTTGATGTATGTGCCTTCTATCCAACTTACATGTTTTACCTTGTGTTAAGAAATGGATCTTGAACCTAACTCAACCCCAAAAAGCTAGCTCAAGAGGTGAGGCTTGTCCAAGTTATAGAAAGAGACCACAGATCCCTTTTACTGTTGATGTGGGACACCCCCCCCCCCCCCACACCATACAGACACACACACACGGGCTAGACATCTGGAGCATGCCAATTTAATACGGGGATCCAACATCGGGAAATACCATGTTAAGAAATTGATCTTGGGGCAAACTCAACCCCAAAAGCAAGCTCACAAGGTGGGGATTGTCCAAGCAAAACAAAAAGACCACCCATCCCTTTTATCACCGATGTGGGATTCGTCATACCTTAAAAGCAGAGTAATTCCACACGAATCTTTCTTTGTGACTGGGGCCTAATGGAACTAGGTTAACTTTATTTTTTCGCATACAATTTCAATGGTAGAGGTCAATTATCAGAGTTAAGTTTGCAGAGTACGTAACGATCTTCAGTTGATCTATTGTACATTAGGTATCTGAAGTGTCTTTAGCAAATTTCATAGTTATATCTGAGCTATAATTTTTTTTAAGTGACTTGGATATTAGTTGCCATGGACTATTAGAGATGAACCTAAATGGACACTGAGAATTCATATAGCCAACTTCAACTTGCTTTGAGGAGTGTTTATTGTTTGTATGTACTATTTAATTGTAATTTTTATCTGCTTCGTGAGCTGATACGTAATTTGCTTTCATGCATTTACTCACTGATTGCTGCAAATCGGATAATGTTATTCTGATTTAGACATGTTAATACCAAACATCTTATCATGTAATAACAAATAATATTCCTTTCTTTCAGGGCCACTGGCCATTTCCTCGGGACAAGCTTACTCAAGGATATGCATATATTTTAACCCACCCTGGAACGGTAATCTTTGTTTTCGTTGATTTTTGTGGTAGATCTTTAAGAAGGAGAAGAGAAAAAATTGTTCTCCGAAGTAAATTGAGTAGCTAAATGTGACGTCCCGCCACATCCTAGTTAAATTTTGCATCGGAAAGAGGCGGAAGGGGCTAGAGTTGTGGAGACGTTTGCGGAGAATTCTAGAACCTTCTAGATTAATCAAGAAGACTAGAGAATTCCTTAGAATACTTTAGATACTTTTGGAAGAGTTTAACATATTCTAGAAAATGTGGAATTCTCGAGAATATGGACTAAAGTGTAATTACTTTAGGGACTTGTAGAGTAATTTTTATTACACTTAGGCCCTTAGGAGGTAGTATAAATAGAAGAGCTCTCATTTGTAAATCATCCAACAATCCAACCAAGCAAAGTTGTAAGCAAGTCTTACAAGTATAATACAAGCCCTTCTTTCAAAGTTCTTTCTAAGTCTTTCTTTACATTCTCTTAGCGATCTAAGTCTTAAAGGCTTACTTGAGCTTAGAAGATCGTGAAAGATTCGTGAGTAAGTTGTGTCAAGTGCCGCATGGAGTCTTAGCAAATACTCTAAGTCCGTGACATAAAGCTCCCTTGTTTTTCTTTTACCAAATAACATTTAGTTTCCTTTCACCTACATTAGTAGCTTTTAAACTAGAAGGGACTAGTGAGATCCAAACTGAGTACTGCATGAGTGTGCTAGCGGAATTGTGGACTCCTTACACGCATACAATGAGCTCTTTAACTTATGTTGTTTTGCTATAACCTAGTCTTACTAGCTTCTATTCGTCATTGCAGCCTGTAATATTTTACGATCATTTCTATGAATTTGGAATCCGTGATGTCATAAATGAGTT</genome_strand>
        <mrna_strand>GTTCGTTGGAAGAGCTTAAAGGCTGTATAGAAGAGATGCATAACCAAGATCTTCTG........................................................................................................................................................................................................................................................................................................................................................................................GCCTTAGGAGATGTCGTTTTGAACCATCGATGTGCTCACAAACAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCCGAATGGTGTTTGGAACATTTTTGGAGGCAAGCTTGCATGGGGACCTGAAGCAATTGTGTGTGATGACCCAAATTTTCAAGGCCGTGGAAATCCTTCAAGTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATATATTTCATGCCGCACCAAATATTGATCATTCCCAGGAATTTGTACGACAAGATATAAAAAAGTGGCTAAATTGGCTCCGAAATGATGTTGGTTTTGATGGGTGGCGCCTTGACTTTGTTAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCTTCTCAGGAGCATATGTGAAAGAATATATAGAAGCATCAAATCCAGCATTTTCTATTGGCGAGTATTGGGATAGTCTCGCTTATGAAGGTGGAAATTTGTGTTACAACCAAG...............................................................................................................................................................................................................................................................................................................................................................ATGCCCATCGCCAACGCATAATTAACTGGATCAATGCTACTGGTGGGAGCTCTTCAGCATTCGATGTCACAACAAAG.....................................................................................................................................................................................................................................................................................GGTATACTGCATTCTGCTTTGCATAACCAATATTGGAGGTTAATTGATCCTCAAGGCAAGCCAACCGGAGTGATGGGATGGTGGCCCTCACGTGCTGTCACATTTTTGGAGAATCATGATACTGGATCCACACAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCACTGGCCATTTCCTCGGGACAAGCTTACTCAAGGATATGCATATATTTTAACCCACCCTGGAACG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGTAATATTTTACGATCATTTCTATGAATTTTGGATCCGTGATGTCATAAATGAGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0190N21-cHQgB/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U584474" ref_strand="-" ref_description="SGN-U584474 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|157341253|emb|CAO49160.1| (e_value=7e-98) unnamed; (*ATH) AT1G76130.1 (e_value=9e-41)  Symbol: AMY2 | alpha-amylase, putative / 1,4-alpha-D-glucan glucanohydrolase, putative, strong similarity to alpha-amylase GI:7532799 from (Malus x domestica);contains Pfam profile PF00128: Alpha amylase, catalytic domain. Predicted to be secreted b... ; (*SWP) sp|P04063|AMY2_HORVU (e_value=3e-42) Alpha-amylase type B isozyme OS=Hordeum vulgare GN=AMY1.2; ">
      <seq>ggttgttttgaaccatcgatgtgctcacaaacagagtccgaatggtgtttggaacatttttggaggcaagcttgcatggggacctgaagcaattgtgtgtgatgacccaaattttcaaggccgtggaaatccttcaagtggtgatatatttcatgccgcaccaaatattgatcattcccaggaatttgtacgacaagatataaaaaagtggctaaattggctccgaaatgatgttggttttgatgggtggcgccttgactttgttaggggcttctcaggagctcttcagcattcgatgtcacaacaaagggtatactgcattctgctttgcataacaaatattggaggttaattgatcctcaaggcaagccaaccggagtgatgggatggtggccctcacgtgctgtcacatttttggagaatcatgatactggatccacaccagggccactggccatttcctcgggacaagcttactcaaggatatgcatatattttaacccaccctggaacgcctgtaatattttacgatcatttctatgaatttggaatccgtgatgtcataaatgagttaattgaggcacgtagacgagctggaatccattgtcgtagcccgttaaagatatatcatgcaaacggtgatggttacgttgcacagattggagatactcttgtgatgaaacttggtcatttggactggaatccttccaaagaagttcatttggatggtacctggcaaaagtttgtcgataaaggaccagaatatcaaatatggctcaggcaataatactacatatattattctggacttgcattgttcttattggtattctgtctatatatatgctttcatgttgtaactataatacatcatacctcacatcagagattttgaattcctgcatcagtaaatgaaaagaataataaaaaagaactgatgttggggtgggctttttatttgacaatggctatttatgatgttattggtttgtattcgtgcattattatatcatttgttattttgttgcataaacaatctatacattaatatcattaactaataaagctgtgttttatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0190N21-cHQgB/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0190N21.3" temp_strand="+" temp_description="C02HBa0190N21.3  AC215414.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0190N21 sequenced_by:kribb upload_account_name:korea">
        <position start="59928" stop="69114"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60227" g_stop="60260" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="34" r_length="34" r_score="0.941"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="60261" i_stop="61237" i_length="977">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.541" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="61238" g_stop="61343" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="35" r_stop="140" r_length="106" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="61344" i_stop="62739" i_length="1396">
            <donor d_prob="0.965" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62740" g_stop="62866" g_length="127"/>
          <reference_exon_boundary r_type="cDNA" r_start="141" r_stop="267" r_length="127" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62867" i_stop="63561" i_length="695">
            <donor d_prob="0.257" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="63562" g_stop="63575" g_length="14"/>
          <reference_exon_boundary r_type="cDNA" r_start="268" r_stop="281" r_length="14" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="63576" i_stop="64077" i_length="502">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="64078" g_stop="64105" g_length="28"/>
          <reference_exon_boundary r_type="cDNA" r_start="282" r_stop="309" r_length="28" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="64106" i_stop="64382" i_length="277">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.902" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="64383" g_stop="64517" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="310" r_stop="445" r_length="136" r_score="0.978"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="64518" i_stop="67377" i_length="2860">
            <donor d_prob="0.760" d_score="0.96"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="67378" g_stop="67446" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="446" r_stop="514" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="67447" i_stop="68250" i_length="804">
            <donor d_prob="0.575" d_score="1.00"/>
            <acceptor a_prob="0.851" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="68251" g_stop="68814" g_length="564"/>
          <reference_exon_boundary r_type="cDNA" r_start="515" r_stop="1078" r_length="564" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0190N21.3" gen_strand="+" ref_id="SGN-U584474" ref_strand="-">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>1077</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0190N21.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U584474" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="60227" e_stop="60260"/>
          <exon e_start="61238" e_stop="61343"/>
          <exon e_start="62740" e_stop="62866"/>
          <exon e_start="63562" e_stop="63575"/>
          <exon e_start="64078" e_stop="64105"/>
          <exon e_start="64383" e_stop="64517"/>
          <exon e_start="67378" e_stop="67446"/>
          <exon e_start="68251" e_stop="68814"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTCGTTTTGAACCATCGATGTGCTCACAAACAGGTAATCATTTTCTAAACTACAGTTCTTTTTTCATAATATATCTGAGATTTTGTTAGCTTTGTTTTGTTTGGAAATAAAACGTTTATGAAGGAACCTTTCAGCTCTAGAAGCATGTTGTTCCGGTCCCCCGATATGGATCTAGTTACGGTACACTGCAGCCTGCAATATGAAATCAAATGTTTTTTTCCACAATCTATATTGCTAGTTCGTTAAGAAAGAAGTTGCAATCTCGAGATAAAGTACTTAAAAACTGAAATGATTTTCTGTTTAGATGTCATGCGATACACATAGAGTTCAAATACAATACTAATAAGATAACTACCATTAGAAACTAGGACATGGCTTCCTAATATTACTGGAATGAGAAAACGCAGTTCAAATACAATACTAATAAGATAACTGCCATTAGAAACTAGGACATGGCTTCCTAATATTACTGGAATGAGAAAATGCAAACTACTACAAAGAAATAACTACTGCTGGAATGAGAAACTGCAAATAACCACTACAACAAAATACCTACTTCAAACAACTACCACAATAAACTGTTGGGAGACTAAGGAGTGATAAACAAGTATGAGTTGTTTGGAAGTCATTCTTCGAGTACCTTTCCATTTTTCTTGCTGACAGTGATTTAAATATCATTTAACACAGCATTGTTAACTGTTAAGGTTGTCCAAGTTGTTCAATGTATATAGTTTGCTTTATCTATTACAAAGGTTTTTGTTCCATAATTGCCTATATCCTCTCTGTATGTCTGTATGAAAGAACATATTTGTAAATTAACATTGCCATCTCTACCCAATTTTTTGTGGATGTGTAATTCATCTGCTCCTTGAGATTGTACGTTTTGTATGAAAAAAATATAGAGACTGCTCTGGAGTAGTCACAGATGAACTTACAGGTGTAATGACCCTTTTGACTCAAACTTATACTGCAAGTCTCGATGGGTCTCTCACCCGATTGGCTGATTGTAGAGTCCGAATGGTGTTTGGAACATTTTTGGAGGCAAGCTTGCATGGGGACCTGAAGCAATTGTGTGTGATGACCCAAATTTTCAAGGCCGTGGAAATCCTTCAAGTGGTATAAATTCTCTCCATGATACATAAATGCTCCATATGATATGGGGTCTGTTTGTAAATATCACGTGCTTTATTTCCAGATGTGAAAAGGTTTATATAATATATAAGAACATTAAGATATTAGAGAACTGCTATAACTTCATTCGTGCAATCTTAATGATAATTTATGGAGATACGCTTCCAGCATTTGATACTCCCTTAGTTGTCTATGCAACTGAACAACATACTATCTTTCTGTCACATCTTTGTTCAGTCTTTGAGTAAAGCAACAACCAAAGTTATTCTGTTAATGGGATCCTGTTTGCTGAGCATTGTAAATGCTTGTGTTCTTTTAAATTGTCTAAATCTTTGCTCATATACAATTCTTATTTGTGCCTTGAACCATGTGTTTTTTTTATTATGTTAAGGACTCGGCAAAATATTCTTATATTGTCACATCTTTCCATTGTACTTTCATTTCTGATAACACCAATGTGTATAGCTTCTGCTCATATTTGTTTAGGTATTTGCAAGATTTGATATGCTTATGACAGTGTAGCATGGTGAAGGCGAAGAATTATCTTGAGTTTAGTCCAGTTTTGGTGTTTGACTTTTTTTGAGTTTCCAGGATTCTCTCTAAAATGTTGTTATTCGAGGAAAGGATCAAAATAGTCCCTCTTCTTTGGGTTAAGGCTCAAAGTGATCCTTGAGTTTTCACATGGAGCACTAATAGTCCCTCATGTTTGCAATATTGGGGCACTTTTGGTCCTCCTTCAAAATTTTACCTATTTTTTTGCATTGATTATTCATAACCTATGTATGGGATGTTCAATCGTCATTTTATATATTTAGTAGCAATAACAAATCCATATCAAAGAATGTTAGAAAAAACATAATTTGTTTTGTTTAGTAGAAATCATATTGCAGGTAAAGTTGAGAGGTTCATCACGATAATTTCACGTGCAATAGTATAATTTTTTCTTTTCCTGCAAAGTCATATGTTAAGATGTTCTTAGTTTAGCTGCAGTAATATTTCTACTGAACAAAACAAGGTGTTTTTCTTATCACCTTCTCTCGGATAGAGTTATTATTTCTATTAAATATATAAAAAAACGATTGGACATCCCTTGTATAAAATTTTGGACAAAATTAATGTTAAAAAATAGGCAAAAAATTTTAGGATAGGACCAAAAGGGCACCAATATTGCGAACATCAGGGACTATTAGTGCTCCATGTGAAAACTCAAGGATCATTTTGAGCCTTAACCTGAAGATGAGGGATTATTTTGAGCCTTTCCTCTTGTTATTCACCTGCATCAGATTTGATGAGCTTCATAGACTTCTGAGAATAGACAATTAGTGTTTCCTCTTATATGATTTTTCTGCTTACCCCTTCTTTATCTGTGTTTGAAGTGTAGGTGATATATTTCATGCCGCACCAAATATTGATCATTCCCAGGAATTTGTACGACAAGATATAAAAAAGTGGCTAAATTGGCTCCGAAATGATGTTGGTTTTGATGGGTGGCGCCTTGACTTTGTTAGGTGAAGTTGTAATGCTTGTTGGTTTTAATACTATTGAAATTAGTACTTCGGTCTTCCATTCAAAATACAAGTTCAAGTGTCTGTAAACATATTGACCTTGCATCATACTGGTTAGAAAATTTGAGAAATTAGAAGAATAAAAGTAGAAGTGTTTGGTTGTAATATGTGGTTCTACTGCATCTCCTGTTTGTTCTTTATTCTACTAGCTTTTCCTTTCTGAAATTTGATAGGGCCAGCTGTTAAATTTTTCTCTATTTCTGTCTGCCTGCCTTTCTTTCTGTCTCCCTTAAATGGATGGTGGAAACTAAATGAAGATAAGGTGGAAAGTTGTAGTCATATGTTCGATTCCTCATATAGAATTCTTGAAAATAGTGATCATATATCGTACAACAGATCTCTCGTAGAGCTATTTTTCATACTAATTTTGATCTCCATTGTAATTCATTATCCTTTGGTTATCGCCTAAGAACCAATGTTGTGGCCAGAATGAAAATGTATGGGCCACTTTGAATGAGATGTTAGGAAGAAACTGACATGGCACCGTTATTAATTAATTCCTGGAGTATTTAACTTCTATTTCCGTAGATACTCTGTGATAGTTAAAAGCTGGATGATCTACTCAATCCTTCGAATCTTTCTGCTTGGTAAAACGACTTTTATTACATGTAGTAATACAGGCGCTTTGTTGTCCACAGGGGCTTCTCAGGAGCATATGTGAAAGAATATATAGAAGCATCAAATCCAGCATTTTCTATTGGCGAGTATTGGGATAGTCTCGCTTATGAAGGTGGAAATTTGTGTTACAACCAAGGTGAGATTTATTTAAATGTAACCGTAGATTTGACTATTTAGTCAGAAATATTTTGACATGTGTGGTGCACAGCGTTAGGTTGTGCAACTGATTTTCTCATTTTCTGCAAATTCTTTTAAGTTGGAATTTTGCAATCTGTTCAAGCAAATAGCCAAAGGTGGTTTTTCTCCAGCTATGTGCTAGCCATTGTTCATGTGCTAGCCACTGTTCATGTGCTAGCCACTGTTCATCGTTTGTACTATTTAGGCGTGTCAATGTCCTTAAACATTGAGAGGCTAATCCCACTATGTGGAAATCCACCAGTTCCTTATGATAGTAGATTTGTGTTGTTCTGACTTCTGATGCATCCAGATGCCCATCGCCAACGCATAATTAACTGGATCAATGCTACTGGTGGGAGCTCTTCAGCATTCGATGTCACAACAAAGGTACTTCTATTAGAACATCTTTTGTTTGTAGATTTCTGTATCATACTCCAAGACCAAGAATTATCCCACTAACCTGGGAAATAATAGTTCCCTGTAATCTATTGTCCCACATAATTTACTCGTTAATAAATCAACCTTTAATAATCAATTCATGCTAAGATATCTATAGGTAAATATTTTCATCCTCCTGATTTAGATTTAAATTGCTTCTTCATACTAGTGCAGAAAGGTTTTAATGAGCTTTTCAACCTGTTGGTGAATGATATTTTTCTGGCAGGGTATACTGCATTCTGCTTTGCATAACCAATATTGGAGGTTAATTGATCCTCAAGGCAAGCCAACCGGAGTGATGGGATGGTGGCCCTCACGTGCTGTCACATTTTTGGAGAATCATGATACTGGATCCACA-CAGGTCCTCTCTCTTTCTTGCTCTAACAAGCGCACACACAAACATACAGATGTACATGCCTACTTGTGCTCTCACTCATTCAGTGAGACATGCTACAACTTAAATGCACTGCCATGGAGGTTGAATATGTCAACATTCACCTTTATAAACCTCTGTTTCAGAGTTTTTGGCCAAAAGCTAAAGTAGATCCGTCTGGTATGCCTTCCACTTTCAAAAATCTTAACAAATTTGGTCCCAAATTTAATTGTCATTTTCGGATAAAGAGACTGTCATGCAAGCAGCACATGAGCACTCTGCTTCTTCTGCTTTGGTTTCTTCTCTTTCCATCTCGGCTCGCAGAATAGGAACAGTATCAGCTTCTGCAGCTTCTCCCACCATTCTTCTTAACTGCCAGCATGATTCAACTGTTCCAACAACGAATCAATCTCCTGTAGCTGGTATATTGAGGGATGAAGCCGAAGGTTCAGGATAACCATAAGTGGGATCTCCATAGTCCATACTCCATCATAAAGAAACTTAAGACCTCATGTCAGAGACATGGAAGTACCAAGGCAGCCCTCTCATACACGTAAATTTAAACTCGCCTTTCACGGCCTCCAGAATTTGAGCACTTCTGTTCTGGAAAAGGAAAGTTTATTGCCGTGAGATTTTCGGTTAAGTGACTGTTGAAACTTGAAAGCATGCTAGGTTCAGACTGGCCCAAAGAAACAAATACACAAATAAATTGCCCAAAGTCTGAAACTTAAGATAATAGTTTCATGCGTAACTAATACTATTTCCTTCTTCATTAGCCTTGGTCAGAACCCTCTGATTGTTGCAAACACCCGGGATGATGATCTCAGGAAACATGTGAAATAGGAGGAGCTGAAAGACATTGAAGCAAACACCTTAGGAATTCAAAAGATCTGAATTTGCATGCCAAACATTTATCAAACCTTACAAAACCAGACTGTTCCATGTCAGCGCATGTATATCCACCTTCATGTGTCAACAACTCCAATGTGAGCAATGAAATTTAGCCTCATAAAATGACTTTTCTGAAACCTTGGTGTTTCCCAGAGGCATGTGTAATGTTTCTCACTGGGGAAAAGGAGCATGAGGATGGGAGAGGCAGAAGTTCTCCTGGAAAAGGGGAAAGGAGAACGTTCACATGAGGTGCACATGACAGTTCTGTTGAAGTTTGACGGAATGTTAAGGTCTTTGCAAAAAGAACTAAATTTTTGGAGACGGAGATGTTATCTGTTAATTATAATTTTAGAGGGAACCACTCAATCTTTTGGCCAACTTGAGGAATGTTTCTGGTAAAATTTTGCTTTGTTCATGGAACACCAAAATCTTGGGGTATTCTGTAGTGTATGTTCCAAATATATATTCTGATAATATAATATTAGATTTTCATATCTGATCCATAAACTTTCAATCTGCAGTTTTATACTCGCATTTGTTGTTGGAAATCTAATAAACGGAGTAGTGAAGCATGAGATTCAGGCTTGAGAGATTTAAAATTCTGAACTTTAAGCTCACCAAGTGATAATGTTTAGTCTATGATGTTGCATACCAAAACAAAACTTGGCGGAAGGATCTATTGAGCATAGATCAGAGTTAGTACCCTAGCTAACCGAGACATGTATTATGGAAGTGCTAGCTAGCAGTTAAGGCTGACTTGATTACCGTCTTATATCTTGGCCTAAATCATTTGATACTTGCCCCCCCCCCCCCCCACCCCACACACACACATACACACTCACACACGCAACCCTACTGCCTCCCTCACATATAGTGGCAGATCTAAGGGTAATTTTTATTTTTGAATTCCTTGATGTAAGAAACACGATAAGTGTAGCGGCTAGGCAATTCAGAAATTGCTTTAGCTTGCAAGTTCCTCCAAGTGTGATATTCTTATGTTCTTTAATCTCCTTGTTAGAATTTCTGGATCCGTCATTACTCACATATGCTCCCATGTTTTACTTACTAATTTTCGATTGCACTGTCCTACATTTGATGTATGTGCCTTCTATCCAACTTACATGTTTTACCTTGTGTTAAGAAATGGATCTTGAACCTAACTCAACCCCAAAAAGCTAGCTCAAGAGGTGAGGCTTGTCCAAGTTATAGAAAGAGACCACAGATCCCTTTTACTGTTGATGTGGGACACCCCCCCCCCCCCCACACCATACAGACACACACACACGGGCTAGACATCTGGAGCATGCCAATTTAATACGGGGATCCAACATCGGGAAATACCATGTTAAGAAATTGATCTTGGGGCAAACTCAACCCCAAAAGCAAGCTCACAAGGTGGGGATTGTCCAAGCAAAACAAAAAGACCACCCATCCCTTTTATCACCGATGTGGGATTCGTCATACCTTAAAAGCAGAGTAATTCCACACGAATCTTTCTTTGTGACTGGGGCCTAATGGAACTAGGTTAACTTTATTTTTTCGCATACAATTTCAATGGTAGAGGTCAATTATCAGAGTTAAGTTTGCAGAGTACGTAACGATCTTCAGTTGATCTATTGTACATTAGGTATCTGAAGTGTCTTTAGCAAATTTCATAGTTATATCTGAGCTATAATTTTTTTTAAGTGACTTGGATATTAGTTGCCATGGACTATTAGAGATGAACCTAAATGGACACTGAGAATTCATATAGCCAACTTCAACTTGCTTTGAGGAGTGTTTATTGTTTGTATGTACTATTTAATTGTAATTTTTATCTGCTTCGTGAGCTGATACGTAATTTGCTTTCATGCATTTACTCACTGATTGCTGCAAATCGGATAATGTTATTCTGATTTAGACATGTTAATACCAAACATCTTATCATGTAATAACAAATAATATTCCTTTCTTTCAGGGCCACTGGCCATTTCCTCGGGACAAGCTTACTCAAGGATATGCATATATTTTAACCCACCCTGGAACGGTAATCTTTGTTTTCGTTGATTTTTGTGGTAGATCTTTAAGAAGGAGAAGAGAAAAAATTGTTCTCCGAAGTAAATTGAGTAGCTAAATGTGACGTCCCGCCACATCCTAGTTAAATTTTGCATCGGAAAGAGGCGGAAGGGGCTAGAGTTGTGGAGACGTTTGCGGAGAATTCTAGAACCTTCTAGATTAATCAAGAAGACTAGAGAATTCCTTAGAATACTTTAGATACTTTTGGAAGAGTTTAACATATTCTAGAAAATGTGGAATTCTCGAGAATATGGACTAAAGTGTAATTACTTTAGGGACTTGTAGAGTAATTTTTATTACACTTAGGCCCTTAGGAGGTAGTATAAATAGAAGAGCTCTCATTTGTAAATCATCCAACAATCCAACCAAGCAAAGTTGTAAGCAAGTCTTACAAGTATAATACAAGCCCTTCTTTCAAAGTTCTTTCTAAGTCTTTCTTTACATTCTCTTAGCGATCTAAGTCTTAAAGGCTTACTTGAGCTTAGAAGATCGTGAAAGATTCGTGAGTAAGTTGTGTCAAGTGCCGCATGGAGTCTTAGCAAATACTCTAAGTCCGTGACATAAAGCTCCCTTGTTTTTCTTTTACCAAATAACATTTAGTTTCCTTTCACCTACATTAGTAGCTTTTAAACTAGAAGGGACTAGTGAGATCCAAACTGAGTACTGCATGAGTGTGCTAGCGGAATTGTGGACTCCTTACACGCATACAATGAGCTCTTTAACTTATGTTGTTTTGCTATAACCTAGTCTTACTAGCTTCTATTCGTCATTGCAGCCTGTAATATTTTACGATCATTTCTATGAATTTGGAATCCGTGATGTCATAAATGAGTTAATTGAGGCACGTAGACGAGCTGGAATCCATTGTCGTAGCCCGTTAAAGATATATCATGCAAACGGTGATGGTTACGTTGCACAGATTGGAGATACTCTTGTGATGAAACTTGGTCATTTGGACTGGAATCCTTCCAAAGAAGTTCATTTGGATGGTACCTGGCAAAAGTTTGTCGATAAAGGACCAGAATATCAAATATGGCTCAGGCAATAATACTACATATATTATTCTGGACTTGCATTGTTCTTATTGGTATTCTGTCTATATATATGCTTTCATGTTGTAACTATAATACATCATACCTCACATCAGAGATTTTGAATTCCTGCATCAGTAAATGAAAAGAATAATAAAAAAGAACTGATGTTGGGGTGGGCTTTTCATTTGACAATGGCTATTTATGATGTTATTGGTTTGTATTCGTGCATTATTATATCATTTGTTATTTTGTTGCATAAACAATCTATACATTAATATCATTAACTAATAAAGCTGTGTTTTATC</genome_strand>
        <mrna_strand>GGTTGTTTTGAACCATCGATGTGCTCACAAACAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCCGAATGGTGTTTGGAACATTTTTGGAGGCAAGCTTGCATGGGGACCTGAAGCAATTGTGTGTGATGACCCAAATTTTCAAGGCCGTGGAAATCCTTCAAGTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGATATATTTCATGCCGCACCAAATATTGATCATTCCCAGGAATTTGTACGACAAGATATAAAAAAGTGGCTAAATTGGCTCCGAAATGATGTTGGTTTTGATGGGTGGCGCCTTGACTTTGTTAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCTTCTCAGGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTTCAGCATTCGATGTCACAACAAAG.....................................................................................................................................................................................................................................................................................GGTATACTGCATTCTGCTTTGCATAACAAATATTGGAGGTTAATTGATCCTCAAGGCAAGCCAACCGGAGTGATGGGATGGTGGCCCTCACGTGCTGTCACATTTTTGGAGAATCATGATACTGGATCCACACCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCACTGGCCATTTCCTCGGGACAAGCTTACTCAAGGATATGCATATATTTTAACCCACCCTGGAACG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGTAATATTTTACGATCATTTCTATGAATTTGGAATCCGTGATGTCATAAATGAGTTAATTGAGGCACGTAGACGAGCTGGAATCCATTGTCGTAGCCCGTTAAAGATATATCATGCAAACGGTGATGGTTACGTTGCACAGATTGGAGATACTCTTGTGATGAAACTTGGTCATTTGGACTGGAATCCTTCCAAAGAAGTTCATTTGGATGGTACCTGGCAAAAGTTTGTCGATAAAGGACCAGAATATCAAATATGGCTCAGGCAATAATACTACATATATTATTCTGGACTTGCATTGTTCTTATTGGTATTCTGTCTATATATATGCTTTCATGTTGTAACTATAATACATCATACCTCACATCAGAGATTTTGAATTCCTGCATCAGTAAATGAAAAGAATAATAAAAAAGAACTGATGTTGGGGTGGGCTTTTTATTTGACAATGGCTATTTATGATGTTATTGGTTTGTATTCGTGCATTATTATATCATTTGTTATTTTGTTGCATAAACAATCTATACATTAATATCATTAACTAATAAAGCTGTGTTTTATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0190N21-cHQgB/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U584993" ref_strand="+" ref_description="SGN-U584993 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|157341250|emb|CAO49157.1| (e_value=4e-96) unnamed; (*ATH) AT3G02100.1 (e_value=2e-70) | Symbol: None | UDP-glucoronosyl/UDP-glucosyl transferase family protein, contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase | chr3:368847-370491 REVERSE | Aliases: F1C9.11, F1C9_11; (*SWP) sp|P0C7P7|Y1567_ARATH (e_value=2e-38) Probable UDP-glucosyl transferase At1g05670 OS=Arabidopsis thaliana GN=At1g05670; ">
      <seq>ggccaatcatgaacacatcagatttactttggacaagcatggggaattcaacaatgcaaaaaatcattttcaacatgttggttcacaacaataaatctgtgaaatcagcagattggcttatttgcaactcaacatatgatcttgaaccaggagccttcaaactagcaccagagatagtgcctataggtccacttttttcaaacaactcactcgaatcaaacgcgttgtcacttgaagcagaagcccttatatcttctagagaatctcctaattcactagccggatcgttctggcccgaggactcaacttgtctagactggcttgatcaacaaccattatgctcagttgtgtatgtagcctttgggagcttcacaatattcaatgaaactcagtttcaagaattggcattagggcttgaactatcaaacaaaccattcttatgggttgtgagaactactactctagatactaaaagtgacattttcttgaaaaaaattgaagaaaaaatagggaggcaaaaggggaaaatagtgagttgggcaccacaacaaaaggtgttgagtcattctagtataggttgttttgttagtcactgtggttggaattcgacgatagaagcaatgagtaacggggttccaatcttgtgttggccttattttgctgaccaatttatgaaccaaagttatgtttgtgatatatggaaagttggattaggactaaagaaaggggataatgggattattagttgtggagaaattaaggttaaagtggaacaattgttagggaatgatgttttcaagaaaagagctttgcaaatcaaggaaatgaatttgaactccgtgaaagaaggtggaaagtctccccaaaatttgataaatttttttgaaggggttaaatcctcataggaaattgaaggaagatttgggggtttttttgcttaaattcatgtattttttaaagggttggaagggggggtttttacccttttgttaccaagggggttatgttttaagtttgtttgtttttttaaaagtaatttgtttctcagtttgtaaactcatttgtccaagagggggtcagaatcaacaatgttaaaagccccccttttgggccccatggcaataaaaaggtaaaaaatttttcttttttgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0190N21-cHQgB/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0190N21.3" temp_strand="+" temp_description="C02HBa0190N21.3  AC215414.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0190N21 sequenced_by:kribb upload_account_name:korea">
        <position start="70083" stop="71821"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70382" g_stop="71522" g_length="1141"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1151" r_length="1151" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0190N21.3" gen_strand="+" ref_id="SGN-U584993" ref_strand="+">
        <total_alignment_score>0.952</total_alignment_score>
        <cumulative_length_of_scored_exons>1141</cumulative_length_of_scored_exons>
        <coverage percentage="0.991" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0190N21.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U584993" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70382" e_stop="71522"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCCAATCATGAACACATCAGATTTACTTTGGACAAGCATGGGGAATTCAACAATGCAAAAAATCATTTTCAACATGTTGGTTCACAACAATAAATCTGTGAAATCAGCAGATTGGCTTATTTGCAACTCAACATATGATCTTGAACCAGGAGCCTTCAAACTAGCACCAGAGATAGTGCCTATAGGTCCACTTTTTTCAAACAACTCACTCGAATCAAACGCGTTGTCACTTGAAGCAGAAGCCCTTATATCTTCTAGAGAATCTCCTAATTCACTAGCCGGATCGTTCTGGCCCGAGGACTCAACTTGTCTAGACTGGCTTGATCAACAACCATTATGCTCAGTTGTGTATGTAGCCTTTGGGAGCTTCACAATATTCAATGAAACTCAGTTTCAAGAATTGGCATTAGGGCTTGAACTATCAAACAAACCATTCTTATGGGTTGTGAGAACTACTACTCTAGATACTAAAAGTGACATTTTCTTGAAAAAATTTGAAGAAAAAATAGGGAGGCAAAAGGGGAAAATAGTGAGTTGGGCACCACAACAAAAGGTGTTGAGTCATTCTAGTATAGGTTGTTTTGTTAGTCACTGTGGTTGGAATTCGACGATAGAAGCAATGAGTAACGGGGTTCCAATCTTGTGTTGGCCTTATTTTGCTGACCAATTTATGAACCAAAGTTATGTTTGTGATATATGGAAAGTTGGATTAGGACTAAAGAAAGGGGATAATGGGATTATTAGTTGTGGAGAAATTAAGGTTAAAGTGGAACAATTGTTAGGGAATGATGTATTCAAGAAAAGAGCTATGCAAATCAAGGAAATGAATATGAACTCAGTGAAAGAAGGGGGAAAGTCTCACCAAAATTTGATAAATTTTATTGAATGGATTAAATCATCATAGGAAATTGAAGGAAGATTTGTGTGTTTTTCTGCTTAAATTCATGTATTTTTTAATGTGTTGTAAGTGTGGG----------TTTGTTACCAAGTGTGTTATGTTTTATGTTTGTTTGTTTTTTTAAATGTAATTTGTTTCTCAGTTTGTAAACTCATTTGTCCAAGATGGTGTCAGAATCAACAATGTTAAAAGCACCCATCTTGGACCACATGGCAATAAAAAGGTAAAAAATTTTACTCTCTTGA</genome_strand>
        <mrna_strand>GGCCAATCATGAACACATCAGATTTACTTTGGACAAGCATGGGGAATTCAACAATGCAAAAAATCATTTTCAACATGTTGGTTCACAACAATAAATCTGTGAAATCAGCAGATTGGCTTATTTGCAACTCAACATATGATCTTGAACCAGGAGCCTTCAAACTAGCACCAGAGATAGTGCCTATAGGTCCACTTTTTTCAAACAACTCACTCGAATCAAACGCGTTGTCACTTGAAGCAGAAGCCCTTATATCTTCTAGAGAATCTCCTAATTCACTAGCCGGATCGTTCTGGCCCGAGGACTCAACTTGTCTAGACTGGCTTGATCAACAACCATTATGCTCAGTTGTGTATGTAGCCTTTGGGAGCTTCACAATATTCAATGAAACTCAGTTTCAAGAATTGGCATTAGGGCTTGAACTATCAAACAAACCATTCTTATGGGTTGTGAGAACTACTACTCTAGATACTAAAAGTGACATTTTCTTGAAAAAAATTGAAGAAAAAATAGGGAGGCAAAAGGGGAAAATAGTGAGTTGGGCACCACAACAAAAGGTGTTGAGTCATTCTAGTATAGGTTGTTTTGTTAGTCACTGTGGTTGGAATTCGACGATAGAAGCAATGAGTAACGGGGTTCCAATCTTGTGTTGGCCTTATTTTGCTGACCAATTTATGAACCAAAGTTATGTTTGTGATATATGGAAAGTTGGATTAGGACTAAAGAAAGGGGATAATGGGATTATTAGTTGTGGAGAAATTAAGGTTAAAGTGGAACAATTGTTAGGGAATGATGTTTTCAAGAAAAGAGCTTTGCAAATCAAGGAAATGAATTTGAACTCCGTGAAAGAAGGTGGAAAGTCTCCCCAAAATTTGATAAATTTTTTTGAAGGGGTTAAATCCTCATAGGAAATTGAAGGAAGATTTGGGGGTTTTTTTGCTTAAATTCATGTATTTTTTAAAGGGTTGGAAGGGGGGGTTTTTACCCTTTTGTTACCAAGGGGGTTATGTTTTAAGTTTGTTTGTTTTTTTAAAAGTAATTTGTTTCTCAGTTTGTAAACTCATTTGTCCAAGAGGGGGTCAGAATCAACAATGTTAAAAGCCCCCCTTTTGGGCCCCATGGCAATAAAAAGGTAAAAAATTTTTCTTTTTTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0190N21-cHQgB/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U602653" ref_strand="+" ref_description="SGN-U602653 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>atgggttcacagccaaaaaaatcgagtagcttgcggctaaggagatcgagaagaaattcttccgtggaaaaacggtcgaaaaatggagtagttaacaacagtagcaatgccgccggcgatgataattcgatttcaatttcggaaaaattggaagctctgaagcaacttctcccagtcaacaatggcgaactaaaagcagatcagttatttgaagaaacagctgattatattgttcttctcagaactcaaatcttcgttttacagaaactgctcgatttttgtgacgatgcatctggtcagtcccaacatattaatgctgtatagttagtagtaattatttcctaatcgaatttttattcttagtagttaggttctcaattgaaggtcagtagttactaataatttatagtgacaaaaatctgaaatacattctaattttttttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0190N21-cHQgB/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0190N21.3" temp_strand="-" temp_description="C02HBa0190N21.3  AC215414.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0190N21 sequenced_by:kribb upload_account_name:korea">
        <position start="76851" stop="75806"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76551" g_stop="76106" g_length="446"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="446" r_length="446" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0190N21.3" gen_strand="-" ref_id="SGN-U602653" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>446</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0190N21.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U602653" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76551" e_stop="76106"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGGGTTCACAGCCAAAAAAATCGAGTAGCTTGCGGCTAAGGAGATCGAGAAGAAATTCTTCCGTGGAAAAACGGTCGAAAAATGGAGTAGTTAACAACAGTAGCAATGCCGCCGGCGATGATAATTCGATTTCAATTTCGGAAAAATTGGAAGCTCTGAAGCAACTTCTCCCAGTCAACAATGGCGAACTAAAAGCAGATCAGTTATTTGAAGAAACAGCTGATTATATTGTTCTTCTCAGAACTCAAATCTTCGTTTTACAGAAACTGCTCGATTTTTGTGACGATGCATCTGGTCAGTCCCAACATATTAATGCTGTATAGTTAGTAGTAATTATTTCCTAATCGAATTTTTATTCTTAGTAGTTAGGTTCTCAATTGAAGGTCAGTAGTTACTAGTAATTTATAGTGACAAAAATCTGAAATACATTCTAATTTTTTTTTTT</genome_strand>
        <mrna_strand>ATGGGTTCACAGCCAAAAAAATCGAGTAGCTTGCGGCTAAGGAGATCGAGAAGAAATTCTTCCGTGGAAAAACGGTCGAAAAATGGAGTAGTTAACAACAGTAGCAATGCCGCCGGCGATGATAATTCGATTTCAATTTCGGAAAAATTGGAAGCTCTGAAGCAACTTCTCCCAGTCAACAATGGCGAACTAAAAGCAGATCAGTTATTTGAAGAAACAGCTGATTATATTGTTCTTCTCAGAACTCAAATCTTCGTTTTACAGAAACTGCTCGATTTTTGTGACGATGCATCTGGTCAGTCCCAACATATTAATGCTGTATAGTTAGTAGTAATTATTTCCTAATCGAATTTTTATTCTTAGTAGTTAGGTTCTCAATTGAAGGTCAGTAGTTACTAATAATTTATAGTGACAAAAATCTGAAATACATTCTAATTTTTTTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0190N21-cHQgB/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U590183" ref_strand="-" ref_description="SGN-U590183 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>tgggtatgggagtaaaaccacgtcccaccggatatggagatgaatcgggtgggtatgggagtaaaacaacctccaccgggtatggaaatgaatcgggtgggtatggaagtaaaaccacatctactgggtatggagatgaatcgggtgggtatgggagtaaaaccacatctaccgggtatggagatgaatccggtggatatgggagtaaaaccaaatccaccggtcatggaagaaagagtggtggtgatgatgacgacgatgatgaggggaaaaaatcagcatacggatctagtgggtatgggagttcaacaattgagaggcctagttatggaaggtctgaggaagatgactacaagaagtctagctatgggaagggcggtgacgatgatgaaggctatggtcgcaagaaatatggtggttctgactctgactctgataaggagaagaataaaaatcgtcgcaaaaagcacaccgatgatgattgagcagtcatgattttctcaaatgtgatctattcatgtgttatttgaagttagtagtaaataaaataaaattggcatgtcttcacagtgttttattgttacgttgcaaaaaacactgatgattgagctgagatgcttttgtcatccgctccaaattcatgccatattattattattattattattaaatgaacttttttatgtgtttgtcgagtcatgtttgtacagagaaggaaatgccagtagttatttgtatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0190N21-cHQgB/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0190N21.3" temp_strand="-" temp_description="C02HBa0190N21.3  AC215414.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0190N21 sequenced_by:kribb upload_account_name:korea">
        <position start="99274" stop="97863"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98974" g_stop="98563" g_length="412"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="413" r_length="413" r_score="0.966"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98562" i_stop="98486" i_length="77">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98485" g_stop="98163" g_length="323"/>
          <reference_exon_boundary r_type="cDNA" r_start="414" r_stop="739" r_length="326" r_score="0.910"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0190N21.3" gen_strand="-" ref_id="SGN-U590183" ref_strand="-">
        <total_alignment_score>0.941</total_alignment_score>
        <cumulative_length_of_scored_exons>735</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0190N21.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U590183" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="98974" e_stop="98563"/>
          <exon e_start="98485" e_stop="98163"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGGTATGGGAGTAAAACCACAT-CCACTGGATATGGGAATGAATCGGGTGGGTATGGAAGTAAAACAACCTCCACCGGGTATGGAAATGAATCGGGTGGGTATGGGAGTAAAACCACATCTACCGGGTATGGAGATGAATCGGGTGGGTATGGGAGTAAAACCACATCTACCGGGTACGGAGATGAATCGGGTGGATATGGGAGTAAAACCAAATCCACCGGTCATGGAAGAAAGAGTGGTGGTGATGATGACGACGATGATGAGGGGAAAAAATCAGCATACGGATCTAGTGGGTATGGGAGTTCAACAGTTGAGAGGCCTAGTTATGGTAGGTCCGAGGAAGATGACTACAAGAAGTCTAGCTATGGGAAGGGCGGTGACGATGATGAAGGCTATGGTCGCAAGAAATATGTAAGTAGTTTTTATTTTTGAATCGCATAATAAAAACAACTTGTTATCTTATTGATTTAATCTTAATAAATTGGCAGGGTGATTCTGACTCTGACTCCGACAAGGAGAAGAATAAAAATCGTCGCAAAAAGCACTCCGATGATGATTGAGCAGAGTCATGATTTTCTCAAATGTGATCTATTCATGTGTTATTTGAAGTTAGTTAGTAGTAAATAAAATAAAATTGGCATGTCTTCACAGTGTTTTATTGTTACGTTGCAAAAAACACTGATGATTGAGCTGAGATGCTTTTGTCATCCGCTCCAAATTTATGCCATATTATTATTATT---------AAATGAACTTTTTTATGTGTTTGTCGAGTCATGTTTGTACAGAGAAGGAAATGCCAGTAGTTATTTGTATC</genome_strand>
        <mrna_strand>TGGGTATGGGAGTAAAACCACGTCCCACCGGATATGGAGATGAATCGGGTGGGTATGGGAGTAAAACAACCTCCACCGGGTATGGAAATGAATCGGGTGGGTATGGAAGTAAAACCACATCTACTGGGTATGGAGATGAATCGGGTGGGTATGGGAGTAAAACCACATCTACCGGGTATGGAGATGAATCCGGTGGATATGGGAGTAAAACCAAATCCACCGGTCATGGAAGAAAGAGTGGTGGTGATGATGACGACGATGATGAGGGGAAAAAATCAGCATACGGATCTAGTGGGTATGGGAGTTCAACAATTGAGAGGCCTAGTTATGGAAGGTCTGAGGAAGATGACTACAAGAAGTCTAGCTATGGGAAGGGCGGTGACGATGATGAAGGCTATGGTCGCAAGAAATAT.............................................................................GGTGGTTCTGACTCTGACTCTGATAAGGAGAAGAATAAAAATCGTCGCAAAAAGCACACCGATGATGATTGAGC--AGTCATGATTTTCTCAAATGTGATCTATTCATGTGTTATTTG-A---AGTTAGTAGTAAATAAAATAAAATTGGCATGTCTTCACAGTGTTTTATTGTTACGTTGCAAAAAACACTGATGATTGAGCTGAGATGCTTTTGTCATCCGCTCCAAATTCATGCCATATTATTATTATTATTATTATTAAATGAACTTTTTTATGTGTTTGTCGAGTCATGTTTGTACAGAGAAGGAAATGCCAGTAGTTATTTGTATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0190N21-cHQgB/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U580906" ref_strand="+" ref_description="SGN-U580906 Tomato 200607#2 [4 ESTs aligned] ">
      <seq>gcaattttatcaatcgagaagaaaataatttttgaaattaacacaatcatgtcttacggtgaaagtgagtatggtggaagtggaattggatccggacagggaaaacccaaaaagtcacatggatctggatatggacgaaacgacgatgatgagccccaatctgaatatggatccggttacgggtcaaaaagtactactcatgactctgatgatcagtacgggtcaggtggatacgggagcaaaaccggatccggtgggcatggaaggaaaagtgaacacggggataagagttcggaatatggatctggttatggaaatgaatcgagtggatatgggagtaaaaccacatccaccgggtatggagatgattcgggtgggtatgggagtaaaaccacatccaccggatatggagatgattcgggtggatatgggagtaaaaccacatccaccgggtatggaaatgattcgggtggatatgggagtaaaaccacatacaccggatatggagatgaatctggtgggtatgggagtaaaaccaaatccaccgggtatggaaatgattcgggtgggtatgggagtaaaaccacctccaccggatatggagatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0190N21-cHQgB/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0190N21.3" temp_strand="-" temp_description="C02HBa0190N21.3  AC215414.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0190N21 sequenced_by:kribb upload_account_name:korea">
        <position start="99839" stop="98634"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="99540" g_stop="98934" g_length="607"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="607" r_length="607" r_score="0.964"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0190N21.3" gen_strand="-" ref_id="SGN-U580906" ref_strand="+">
        <total_alignment_score>0.964</total_alignment_score>
        <cumulative_length_of_scored_exons>607</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0190N21.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U580906" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="99540" e_stop="98934"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAATTTTATCAATCGAGAAGAAAATAATTTTTGAAATTAACACAATCATGTCTTACGGTGAAAGTGAGTATGGTGGAAGTGGAATTGGATCCGGACAGGGAAAACCCAAAAAGTCACATGGATCTGGATATGGACGAAACGACGATGATGAGCCCCAATCTGAATATGGATCTGGTTACGGGTCAAAAAGTGCTACTCATGACTCTGATGATCAGTACGGGTCAGGTGGATATGGGAGCAAAACCGGATCCGGTGGGCATGGAAGGAAAAGTGAATACGGGGATAAGAGTTCGGAATATGGATCTGGTTATGGAAATGAATCGGGTGGATATGGGAGTAAAACCACATCCACCGGGTATGGAGATGATTCGGGTGGGTATGGGGGTAAAACCACATCCACCGGATATGGAGATGATTCGAATGGGTATGGGAGTAAAACCACATCCACCGGGTATGGAAATGATTCGGGTGGATATGGGAGTAAAACCACATCCACCGGGTATGGAGACGATTCGGGTGGGTATGGGAGTAAAACCACATCCACCGGGTATGGAGATGAATCGGGTGGGTATGGGAGTAAAACCACATCCACTGGATATGGGAATG</genome_strand>
        <mrna_strand>GCAATTTTATCAATCGAGAAGAAAATAATTTTTGAAATTAACACAATCATGTCTTACGGTGAAAGTGAGTATGGTGGAAGTGGAATTGGATCCGGACAGGGAAAACCCAAAAAGTCACATGGATCTGGATATGGACGAAACGACGATGATGAGCCCCAATCTGAATATGGATCCGGTTACGGGTCAAAAAGTACTACTCATGACTCTGATGATCAGTACGGGTCAGGTGGATACGGGAGCAAAACCGGATCCGGTGGGCATGGAAGGAAAAGTGAACACGGGGATAAGAGTTCGGAATATGGATCTGGTTATGGAAATGAATCGAGTGGATATGGGAGTAAAACCACATCCACCGGGTATGGAGATGATTCGGGTGGGTATGGGAGTAAAACCACATCCACCGGATATGGAGATGATTCGGGTGGATATGGGAGTAAAACCACATCCACCGGGTATGGAAATGATTCGGGTGGATATGGGAGTAAAACCACATACACCGGATATGGAGATGAATCTGGTGGGTATGGGAGTAAAACCAAATCCACCGGGTATGGAAATGATTCGGGTGGGTATGGGAGTAAAACCACCTCCACCGGATATGGAGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0190N21-cHQgB/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U602109" ref_strand="+" ref_description="SGN-U602109 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|145308227|gb|ABP57378.1| (e_value=6e-67) GNOM-like; (*ATH) AT1G13980.1 (e_value=3e-49) | Symbol: None | pattern formation protein (EMB30) (GNOM), identical to SP:Q42510; contains Pfam profile PF01369: Sec7 domain | chr1:4788556-4794651 FORWARD | Aliases: F16A14.20; (*SWP) sp|Q42510|EMB30_ARATH (e_value=3e-48) Pattern formation protein EMB30 OS=Arabidopsis thaliana GN=EMB30; ">
      <seq>atgctgcagatgtgcttgactggagttgatgggatccatatccctgaagatttgtggttgcaatgttttgatcaggtgatatttacattactagatgaattactcaatcttgcccagccgagctttgtgaaggattataggagcactgaaggagcaatagttttggcactgaagctcatgttcaaaatgtttttacagtctttgaatcatctctcccagtcgacatccttttgcaaactgtggttaggggtcttgagtctaacagagagatgcatgaaggtgaaatttaaagggaaatggagtgaaaagatccctgaactcatttccgagctcctaaagaacactctacttgtcatgaaaacaagtggaattctggggccaagtaatcctgtaggaggggacagcttctggaagtcaacatggttgcatgtccacaaaatatgcccatcccttcagacagaaatctttcccacaaacgaagcagaacagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0190N21-cHQgB/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0190N21.3" temp_strand="-" temp_description="C02HBa0190N21.3  AC215414.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0190N21 sequenced_by:kribb upload_account_name:korea">
        <position start="107723" stop="106634"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="107423" g_stop="106934" g_length="490"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="490" r_length="490" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0190N21.3" gen_strand="-" ref_id="SGN-U602109" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>490</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0190N21.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U602109" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="107423" e_stop="106934"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGCTGCAGATGTGCTTGACTGGAGTTGATGGGATCCATATCCCTGAAGATTTGTGGTTGCAATGTTTTGATCAGGTGATATTTACATTACTAGATGAATTACTCAATCTTGCCCAGCCGAGCTTTGTGAAGGATTATAGGAGCACTGAAGGAGCAATAGTTTTGGCACTGAAGCTCATGTTCAAAATGTTTTTACAGTCTTTGAATCATCTCTCCCAGTCGACATCCTTTTGCAAACTGTGGTTAGGGGTCTTGAGTCTAACAGAGAGATGCATGAAGGTGAAATTTAAAGGGAAATGGAGTGAAAAGATCCCTGAACTCATTTCCGAGCTCCTAAAGAACACTCTACTTGTCATGAAAACAAGTGGAATTCTGGGGCCAAGTAATCCTGTAGGAGGGGACAGCTTCTGGAAGTCAACATGGTTGCATGTCCACAAAATATGCCCATCCCTTCAGACAGAAATCTTTCCCACAAACGAAGCAGAACAGT</genome_strand>
        <mrna_strand>ATGCTGCAGATGTGCTTGACTGGAGTTGATGGGATCCATATCCCTGAAGATTTGTGGTTGCAATGTTTTGATCAGGTGATATTTACATTACTAGATGAATTACTCAATCTTGCCCAGCCGAGCTTTGTGAAGGATTATAGGAGCACTGAAGGAGCAATAGTTTTGGCACTGAAGCTCATGTTCAAAATGTTTTTACAGTCTTTGAATCATCTCTCCCAGTCGACATCCTTTTGCAAACTGTGGTTAGGGGTCTTGAGTCTAACAGAGAGATGCATGAAGGTGAAATTTAAAGGGAAATGGAGTGAAAAGATCCCTGAACTCATTTCCGAGCTCCTAAAGAACACTCTACTTGTCATGAAAACAAGTGGAATTCTGGGGCCAAGTAATCCTGTAGGAGGGGACAGCTTCTGGAAGTCAACATGGTTGCATGTCCACAAAATATGCCCATCCCTTCAGACAGAAATCTTTCCCACAAACGAAGCAGAACAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0190N21-cHQgB/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U599859" ref_strand="+" ref_description="SGN-U599859 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|145308227|gb|ABP57378.1| (e_value=3e-87) GNOM-like; (*ATH) AT5G39500.1 (e_value=1e-76) | Symbol: None | pattern formation protein, putative, similar to SP:Q42510 Pattern formation protein EMB30 {Arabidopsis thaliana}; contains Pfam profile PF01369: Sec7 domain | chr5:15832502-15837273 FORWARD | Aliases: MUL8.180, MUL8_180; (*SWP) sp|Q42510|EMB30_ARATH (e_value=2e-75) Pattern formation protein EMB30 OS=Arabidopsis thaliana GN=EMB30; ">
      <seq>cagaaattggtgctgttttggccgttatgaggagaaatgtaaggtgggggttccattatgctgctgctgatgatcagctagagcatcctctcatacattctttcaaggaattacggaaaaatgtcttctcatggaaacatcactggaacagagttgatccactcctatatcttcagcctttcttggatgtgattcaatctgatgaaactggtgcaccaataaccggtgttgcactgtcttctgtttacaaattcttaacccttgaaataattgattcatctatcatgaatgtggagaaagctttatatcagatagttgagaccgtgacaagttgccgctttgaagtgactgatcctgcctctgaggaagtggtactgatgaagatacttcaggttcttttggcttgcatgaaaagtaaggcatcagaaaatttaagtaatcatcacgtgtgcaacattgtaaacacttgctttcggcttgctcatcaagctagtgccaaaagtgaactgctgcagagaatagcaagacacacaatgcatgaattggtgagacacattttcgctcacct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0190N21-cHQgB/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0190N21.3" temp_strand="-" temp_description="C02HBa0190N21.3  AC215414.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0190N21 sequenced_by:kribb upload_account_name:korea">
        <position start="112857" stop="111690"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="112557" g_stop="111990" g_length="568"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="568" r_length="568" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0190N21.3" gen_strand="-" ref_id="SGN-U599859" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>568</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0190N21.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U599859" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="112557" e_stop="111990"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGAAATTGGTGCTGTTTTGGCCGTTATGAGGAGAAATGTAAGGTGGGGGTTCCATTATGCTGCTGCTGATGATCAGCTAGAGCATCCTCTCATACATTCTTTCAAGGAATTACGGAAAAATGTCTTCTCATGGAAACATCACTGGAACAGAGTTGATCCACTCCTATATCTTCAGCCTTTCTTGGATGTGATTCAATCTGATGAAACTGGTGCACCAATAACCGGTGTTGCACTGTCTTCTGTTTACAAATTCTTAACCCTTGAAATAATTGATTCATCTATCATGAATGTGGAGAAAGCTTTATATCAGATAGTTGAGACCGTGACAAGTTGCCGCTTTGAAGTGACTGATCCTGCCTCTGAGGAAGTGGTACTGATGAAGATACTTCAGGTTCTTTTGGCTTGCATGAAAAGTAAGGCATCAGAAAATTTAAGTAATCATCACGTGTGCAACATTGTAAACACTTGCTTTCGGCTTGTTCATCAAGCTAGTGCCAAAAGTGAACTGCTGCAGAGAATAGCAAGACACACAATGCATGAATTGGTGAGACACATTTTCGCTCACCT</genome_strand>
        <mrna_strand>CAGAAATTGGTGCTGTTTTGGCCGTTATGAGGAGAAATGTAAGGTGGGGGTTCCATTATGCTGCTGCTGATGATCAGCTAGAGCATCCTCTCATACATTCTTTCAAGGAATTACGGAAAAATGTCTTCTCATGGAAACATCACTGGAACAGAGTTGATCCACTCCTATATCTTCAGCCTTTCTTGGATGTGATTCAATCTGATGAAACTGGTGCACCAATAACCGGTGTTGCACTGTCTTCTGTTTACAAATTCTTAACCCTTGAAATAATTGATTCATCTATCATGAATGTGGAGAAAGCTTTATATCAGATAGTTGAGACCGTGACAAGTTGCCGCTTTGAAGTGACTGATCCTGCCTCTGAGGAAGTGGTACTGATGAAGATACTTCAGGTTCTTTTGGCTTGCATGAAAAGTAAGGCATCAGAAAATTTAAGTAATCATCACGTGTGCAACATTGTAAACACTTGCTTTCGGCTTGCTCATCAAGCTAGTGCCAAAAGTGAACTGCTGCAGAGAATAGCAAGACACACAATGCATGAATTGGTGAGACACATTTTCGCTCACCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0190N21-cHQgB/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U564382" ref_strand="+" ref_description="SGN-U564382 Tomato 200607#2 [10 ESTs aligned] (*GB) gi|7672782|gb|AAF66639.1|AF143743_1 (e_value=0) SNF1; (*ATH) AT3G01090.2 (e_value=0) | Symbol: None | Snf1-related protein kinase (KIN10) (SKIN10), identical to Snf1-related protein kinase, KIN10 SP:Q38997 from (Arabidopsis thaliana) | chr3:31188-34494 REVERSE | Aliases: None; (*SWP) sp|Q38997|KIN10_ARATH (e_value=0) SNF1-related protein kinase catalytic subunit alpha KIN10 OS=Arabidopsis thaliana GN=KIN10; ">
      <seq>gtgaataccaggggggaaaaattaacagaatcaaaaatcagtgaactccattcttgtgcttctgcagccatccttacccccaccccccgaatctcctccaccccacgactggcctcaacttcttccccctgtattccaggaggccattgatactctctttcatcaccaaatgttgaagataatcgcttgattttcccaattttcatattttgttgttgaatttcttcaatctgcttcttggggtttagcttctgccaggaaaatggacggaacagcagtgcagggcaccagcagtgttgactcatttttacggaactataaactcgggaaaacacttggcattggatcgttcggcaaagttaaaatagctgaacatacgttaacagggcacaaagttgctgtcaagattcttaatcgtcgaaaaatcaggaatatggacatggaggagaaagtccgtagagaaatcaaaatattgagattgttcatgcatcctcatattatacggctttatgaggtcatagagacaccatcagatatatatgttgtgatggagtatgtgaaatctggcgagttatttgattacattgttgagaagggcagattgcaggaggatgaagctcgtaacttttttcagcagataatttctggtgtggagtactgccatagaaacatggtggttcatagagaccttaagcctgaaaacctccttctggactccaaatggaatgtgaagatcgcagattttggtttgagcaatatcatgcgcgatggtcattttctgaagacaagttgcggaagcccaaactatgctgccccagaggttatatcaggtaaattgtatgctggccctgaggtagatgtatggagctgtggtgttattctttatgctcttctctgtggcacccttccgtttgacgatgaaaacatacccaatctttttaagaaaataaagggtggaatatatactctgcccagccatttatcagctggtgcgagggatttgattccgaggatgcttatagtcgacccaatgaagcgaatgactattcctgagattcgcctgcacccttggttccaagctcatttgccacgctatttggccgtgcctccaccagatacaacccaacaagcaaagaagatcgatgaagagattcttcaagaggtggttaagatgggatttgacaggaacaaccttactgagtctcttcgcaatagagttcaaaatgagggcactgttgcatactatctgctcctggacaatcgccatcgtgtttccactggctatcttggagctgaatttcaggagtccatggaatatggttacaaccggatcaattctaatgaaaccgctgcttcccctgttggtcaacgtttcccaggaataatggattatcagcaagctggtgcaagacagttccccattgaaagaaaatgggctcttggcctccagtctcgagcgcatccacgtgaaataatgactgaagttttgaaagctctgcaagaactgaatgtatgttggaaaaagattggtcagtataacatgaaatgtcgatgggttcctagcttacctggtcatcatgaaggcatgggtgttaattccatgcatgggaatcagttctttggagatgattcatccatcattgagaatgatggggccacaaagttaacaaatgtggtcaagtttgaagttcagctttacaaaaccagggaggagaagtacttgcttgaccttcagagacttcagggtccacaattcctcttcctggatctctgtgctgcttttcttgctcagcttcgagtactttaaagtctccgaaataaggagctaagttggaaaaagcccatgcttgtatataattggtataccagctcagttactgcattttgtcttgttaacaaattccaccctgcttggtcagaggtgcctagcaactctttttttcttttgattcgctaggagatctagctcactctcttttttaacgtttatggaatttcagttacctacagtatctacttacagattgaactgcaagatgagcgcgatgtctgtctgtgacccattccctcttctccccttatcgacgatcatttggagtccaacgaagattttcttgtgtcaaatttgaaatgtttgtctgaataaaaacaagtccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0190N21-cHQgB/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0190N21.3" temp_strand="-" temp_description="C02HBa0190N21.3  AC215414.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0190N21 sequenced_by:kribb upload_account_name:korea">
        <position start="129684" stop="117419"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="129384" g_stop="129127" g_length="258"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="258" r_length="258" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="129126" i_stop="127674" i_length="1453">
            <donor d_prob="0.956" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="127673" g_stop="127480" g_length="194"/>
          <reference_exon_boundary r_type="cDNA" r_start="259" r_stop="452" r_length="194" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="127479" i_stop="126931" i_length="549">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.920" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126930" g_stop="126746" g_length="185"/>
          <reference_exon_boundary r_type="cDNA" r_start="453" r_stop="637" r_length="185" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="126745" i_stop="126658" i_length="88">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.934" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="126657" g_stop="126475" g_length="183"/>
          <reference_exon_boundary r_type="cDNA" r_start="638" r_stop="820" r_length="183" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="126474" i_stop="123349" i_length="3126">
            <donor d_prob="0.906" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="123348" g_stop="123217" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="821" r_stop="952" r_length="132" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="123216" i_stop="122623" i_length="594">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.930" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="122622" g_stop="122437" g_length="186"/>
          <reference_exon_boundary r_type="cDNA" r_start="953" r_stop="1138" r_length="186" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="122436" i_stop="120204" i_length="2233">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.936" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="120203" g_stop="120114" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="1139" r_stop="1228" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="120113" i_stop="120043" i_length="71">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="120042" g_stop="119959" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="1229" r_stop="1312" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="119958" i_stop="119732" i_length="227">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="119731" g_stop="119594" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="1313" r_stop="1450" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="119593" i_stop="119172" i_length="422">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="119171" g_stop="118929" g_length="243"/>
          <reference_exon_boundary r_type="cDNA" r_start="1451" r_stop="1693" r_length="243" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="118928" i_stop="118183" i_length="746">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="118182" g_stop="117719" g_length="464"/>
          <reference_exon_boundary r_type="cDNA" r_start="1694" r_stop="2157" r_length="464" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0190N21.3" gen_strand="-" ref_id="SGN-U564382" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>2157</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0190N21.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U564382" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="129384" e_stop="129127"/>
          <exon e_start="127673" e_stop="127480"/>
          <exon e_start="126930" e_stop="126746"/>
          <exon e_start="126657" e_stop="126475"/>
          <exon e_start="123348" e_stop="123217"/>
          <exon e_start="122622" e_stop="122437"/>
          <exon e_start="120203" e_stop="120114"/>
          <exon e_start="120042" e_stop="119959"/>
          <exon e_start="119731" e_stop="119594"/>
          <exon e_start="119171" e_stop="118929"/>
          <exon e_start="118182" e_stop="117719"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGAATACCAGGGGGGAAAAATTAACAGAATCAAAAATCAGTGAACTCCATTCTTGTGCTTCTGCAGCCATCCTTACCCCCACCCCCCGAATCTCCTCCACCCCACGACTGGCCTCAACTTCTTCCCCCTGTATTCCAGGAGGCCATTGATACTCTCTTTCATCACCAAATGTTGAAGATAATCGCTTGATTTTCCCAATTTTCATATTTTGTTGTTGAATTTCTTCAATCTGCTTCTTGGGGTTTAGCTTCTGCCAGGTGGGTTTGCATGTTTGATTTCGTTTTTATTGGTAAAAAATTTATTCTCTATCAATATTTATCAGATCTGTTCTTGCTAGGGTTTTTTTCAAGAATATGACCGGTTGGGGGGTTAGATAATTGGGTAATTTCAAGATTTGGTTTTGGGGTTATGGGATTTGATTGTTTTTCGGCATTTAGGGTTATAAACGGGGTGGGGTTGGGGATTAATTCGACATTTGACTATGGGGTTGTGAATTTCTTTATCAAGTTAGCTCCTTTTCATTTTTTTTAGGGTGTGGGTACTGTTTATTGAGAATTTCTCTGTCGATTTTTTGAGAATTTGAGTGATAAAACGTGCCAATTTTAGCATAGGTGGGGTGGGGGTGGGGTAATTGAAGCTTTGTGACAGGTAGTGAGATCATGATGCCTTAGGTTTGGCTCCTCATTAGCATTTGGGTCTGTGTTTAAAGTATATGTTGGTATTATTCTTACTAGTGTGTTAAAGAGGGTGTCTATCGATACCTGTTGGTGAATTGTAAATTTTGGAAATATATTCCAACTTATGGGCAAAAAGAAATTACTATAGGGAGATTACAATCCAATTATAGATAAGACATTACTGACGATTAGTTTTATTTGAAAAGACATTATTTATGTACCTTTTAGGCCTTCAAAATTCTTCCTCTTTCAGTTATCATGGAAAGAGAAAGGTATATATGTTGTTCTAAAAATGCAATCTTTGGCACCCCGAAGCACCGGCAAAGGTATATATGTTGTTCTAAAAATGATGGCTTACTATCGTTTGTCACTTGAGACAATTAAGCTCCCTACAGATACTAGTATATGCAACTTTGGTAGATGAGTTAGGCAGTTGTGCATTGTGCCTATATTGCTCGGATTCTTCAAAATCCTAGTCACACACGCAACGTAGGTGTGGGATCTGCACTGGATTTGGTTAATTTACCTTGGGAGTACTTTGACCACATTTATGACTGAAAACTTCTAGTTCAATAGCTTTAATTAATCAAAAAATATTCTTTATATGTCATAATCTACATTTATTGGCATATCTCAGCACCCGTACCCGTACTTGAATCCATACCCCAAATCCTAAAACTTATGTGATGATGAATCTAACTGTCAGATCCGCACCCGTATCAATTACCCGCACCCGAATCCGAGCAACTTAGCATTGTGCTTTCGGAGTATCTTCGCTTCCAAGGAAGAATCCATTTTGAAAATAATCTCAAATTTATTACTCACATCTAGCAATTAATTATGGTACTAGCTAGTAATTTGTTGGAGGTAGCCAGCGTATTCTTAACGCTGAAGAATATAACTTTACCTTTCTAAAACAAATCTAGCTATCAAATTTTTCTTTTTGAGTGTTATTACAGGCGGAGGTACCTTTTGGAGTGTTTTTTGTGCCTTTTCTAAATCTAATTTGCCTCTAATTTTCTTGTGTTGATAGGAAAATGGACGGAACAGCAGTGCAGGGCACCAGCAGTGTTGACTCATTTTTACGGAACTATAAACTCGGGAAAACACTTGGCATTGGATCGTTCGGCAAAGTTAAAATAGCTGAACATACGTTAACAGGGCACAAAGTTGCTGTCAAGATTCTTAATCGTCGAAAAATCAGGAATATGGACATGGAGGAGAAAGGTATAGAAGTTAGAGAGTGCAGTCACATTCTCCCTTACTATCCAAAGTATATGAACATCGTTTCTCCTTTTTACCCCTAATTTTTAAGGTAAAAAGGGTAAGAAGTGGTGAGGTTTGAAGAAGGACAAACTGAATCTTGCAAGATGAAGATTGATGTTTAACCTAATGTTTGGCCTGTTTGTTCCTTTTAATATTTGTTTTTTTCTGTTCTATCTGACCTGGAACCTATATAAATGGATGATTAGATTGTCAATTGATTTGAATGTGGTTGAATTTTTCTTCTACTTTAATTTAAACGATAATCTTTGATTCTTTTTCACTCAAAATTTGCATTGAACTCCATATATGAAATTTTTGTTCTCAAATCTCTAGGTGTTTGTGGTTTGATTAGACTAGTGCCCAGTAGGATATACCTTGATGGAGGATGATTTTTGTTCTGAATGATTGGACATTGCTTGCTCTTGGTTCTAGGCTACAATTGTATATTTTTTTTCCTGTTTATGGATGTCTGGACTGTGTTAAGAGTTTTATATTGCTGAAATTCTGCAGTCCGTAGAGAAATCAAAATATTGAGATTGTTCATGCATCCTCATATTATACGGCTTTATGAGGTCATAGAGACACCATCAGATATATATGTTGTGATGGAGTATGTGAAATCTGGCGAGTTATTTGATTACATTGTTGAGAAGGGCAGATTGCAGGAGGATGAAGCTCGTAACTTTTTTCAGCAGGTGGATGTGCCACTTCCTTGAATGAGTTTTTTCATGCTGTTTAACTTTTTTAAAGTAGTTATGGTATTCTAATTCTTCTAAAAAACAGATAATTTCTGGTGTGGAGTACTGCCATAGAAACATGGTGGTTCATAGAGACCTTAAGCCTGAAAACCTCCTTCTGGACTCCAAATGGAATGTGAAGATCGCAGATTTTGGTTTGAGCAATATCATGCGCGATGGTCATTTTCTGAAGACAAGTTGCGGAAGCCCAAACTATGCTGCCCCAGAGGTACTGAAGCTTCTGATTCGAGTTAACAGCAATTACTTTTTGTGGTTCTGCCTAACTGATTGAAAAAAGAGTTGTGATTCATCACAATACTTAGAATGTATGCTGCATTTTGACTTGTCAGTATTTTTTTACATGCTCAATACATAGTCTAACCCCCCTCCCCCACCCACCCAAAAATGCTGTGTACTCAAATCCCTTTTACACACCCCTTGATAATGGGAATCATTGGAGTGGGAAAATTTTCTTGAAATTGGTAATAACAATATAATTTAATGGCCAAGAGGAGGAGAAGAAACAATCCAAATGGTTCCCAGATTAGTTTCGTTTAAATAGATTTGTCTATTTCAAAGTGAGGAAGAAGAAGAAGAAGAATGTGGAAGAATAATATTTGATTAATTTTTGATCTTTTTACAATTTCTGAAGTATTTTTCTTTTTCTATATTGTGAAATGTTTTGGGTTGTGATTGGTGTGTGAAATACACTTATCAAAGGAAAGTGATGAAACATAAAAATGGTGTGTATTAGACATAGGGGTGTCATATTAGGCCCAAACCCATTTGGCCCGCACATGTTTTGAATGGTTTGGGCATGGGCTACATACAAATGAGTTACGTTTGGGTTCTACTCATTTTAACCCATGAAGGAAGCTAAGCCCAAACTCAACCCATCATTTTTCATTTTTTTTTGAAGACAAAGGAAACCGATAGTTGCTATCCTTTGGGTGTGCACATGGTAAGACCCCGCTTTTATGCAATAGCTCGCAAACCACACATGAGCGGTGATTCACACTAGGCAATCCGGTGCGACGAGCTCCACCCAGAAGGCAAACCTATTGCTTTTGTCGGTTTTGAACTTGAGACCCCCAAAATGGAAGTCCCGCCCAAACCATTTGGCCATCCCGAAGGGTATAATTTTTCAAACTTCAATGTCAATAATTAGAGTTAAACTCATGATTATCCAAGATAAATGTCAAGTTGTCATCATTTGGATTATCTTTATGACTTTTATTTTTTTTGACCTTTTAAGTCAATTAAATAAAAGAAGAATGTCACTATGTGGAGATTTTATGCAACATATAATTAATGATGATATTACTTTTTTAAATTTATTTAAGTTTTTTGACCTTTTCAATGGCTTAACAGGAAGTCCTATTTACTTTCATCATCTTTTTTTTGGGTTATATTTCCCTTTATTATTAGATGTTTGTTTTTGGTCAAGTCATATTAGAATAAATTTATTAATTCAAAGTCTATACAACTATAAAGATTAAAATGTCAGGAATAGATATATGTTTCATATTGAATTTAATGATAATCACCATCAATATTTTAAATGGCGGACTTATAATTTATATATTTATTTGCTGGGATATGAATGAGCATCTTTTTCCACTTTTTGTTAAAAAAATTAGTTTAAGGAGTTGCCTATTTAGAAGGTGTTTGGATTGGCTTAAAAGTTGGTCAAACCTACTTTTAAGTCAGTTTTAGACTTCAAAAAGTGTTTTGGCAAATATAAAAAATAACTTACAATTAGTCAAAAATGACTTAAAATAAATAAAGAAGTGTTTGACAAGGTTAAAAATGACTTAAATAAGTTAAAAATGACTTTAAATAAGTCAAAAATCAAAAGTAGGTCTCCCCCTACTTTTTATTTTTCGACTTAAAAATCATTTTATTTCAACTTTTTATTTTTGACTTAAAAACTACTTTTTTTTTATGCCAATCCAAAAGGCTCTTAGGCAATTCTATATTTCGGTACGGTCTTACCCTATAGGGTGATTTTGTTTTTGGTAAAAGAAAGAGAAATAATGTCTTTCTTTTACTCTTTAAAAAACATATTTTTTTTGTTGGACAAGTTTATCATTCAATTATTTTCTAATATTTAATAATTTAAAATCAACATTAAATCTTTACTAACTTAAACCATTTTAGATTTATTTTATTTCTTCTAACGAATATCAATTTGAACAGGAATCAATTATGATTTTTACGCCAACAAGGGTTGTGGTGAAACCAAGACCTCTAGGGTATGGAGTCGTCTTTGTTAGTGCTGTTAGGGAGCACTGTATCCCCAATGTGGGACTTTCGGGCACAAATCGGAGTTTAGTTGGGCTCCAATGTAGGGCACCAAATGGGAAACCAAAATAAATACATATGATTTTTACATATTAATATTAAATGCAAGATGCATAAAAGTTATATGCATTAATCATTCTCAAAAAATAAAAGTTATATGCATTAAATAGGATTTTGACCAATTATAGTTTTGTCCCAAATTAAAAGTCTACATATATTTTAAATGTATATCATCAATAGAATTGATGTCAGACACAAACAAATCATTTATTTAAATGCTCAATTCAAACTACAAACATCACCAAGGAAAAATTCCAAATATTTCTAAATTGTAACCATTTAGGACTAACTTTTTACTATAAGTATATAGGTATGGAGATCTGTTTGTGGATATTCGGTTGAGAATGTTTATTGATATCTTTAAAAGGAAAGAACAAAACTTGTATCAAGTTGGGCGGGCTGGGCTGTGGCGAGGGGCGAATGTAGGCCCAAATTATGTTGCGCGTGAACGCATGGTCTCTCTGCAAATTAGATATTTTTTGTACATATTCTTGAATTGATCTAATATTCTCTGATGACTCTCATACTCCAAAAAACTTGAATGGTGTATTTGGTTCAATGTTGAGTTTTGTACCCCAAGGTCTAGGGATCAATTCCTACTTACTACTCTCTTTTTTCTCTTTTTCTTTTAAAGTTGTGCACCCATGTTCTAGAAATCATAGATCCGCTCTGGCTATGACCCGTCATTTAGCTCATCTTGACCCAACTCATTTTAGCCAAGTAGGCTATGGGCATGGTTGAGCAAATGACCCATTTGTGGATTCAACCCATCTTAGCCCAAACAACCGATTTGCCACCCCTTAGGCATACTTTCTGGAAATGTTTGGTGTGTAAAGTTATTCCCATGGTTAAAGCGGCATATAAAATGGATTTGGTTACAACCTTGGGCTGTAAACTATGTATTGAGTCTTTTTTCCCTTTAAAAAGTGCTTTTTATGCTCAATTGGTTTTTTTTTTTGATAACCATTAAATTCTTTCTCTCTCTCTGTAGGTTATATCAGGTAAATTGTATGCTGGCCCTGAGGTAGATGTATGGAGCTGTGGTGTTATTCTTTATGCTCTTCTCTGTGGCACCCTTCCGTTTGACGATGAAAACATACCCAATCTTTTTAAGAAAATAAAGGTATATTTTAGTTTACTTGAAATCCAGCATGTTAATGTTGATCCTTCTATCAATTTTATCCTATATTGATTTAGCTGCCCCGTGGCTTGAAATTGTGTGTTCCCAAATCTGCGACCTGATTGTAGTCCGACCCCGTTTCATGTTGGCGTTCAATTTTATTTGGTGGATAAAGGACTACAACTTTTGGCCCCATATCCAAACTTTCATTATTGCATACATAATAAGTCGGATGTTGTGTGGGTAGCTCCACTTTTCGTTGATGAGACTTGAGTATGTTACTGATTTATCCCATTTTACTATGCTGGTCAACTCTTTGTTTTCCAGTTCTGCCCTTCCAAATGTATCATGTCCAGGAAAAAAACAAAGATTGTTTAGATCTGCTGGGACCCAATCTCACCCTTTTTGTTGTTTTGGGTAAGTGGACATGATGTGAAATGTCAAATGGAAAAGGAAAAATGAAAACGATTCTCCATTGGAATGAATTTATGCTCCCTGTCTGTTCCCCAAAAAAGGGAGAGATTAGTTGATACATTTATTGAATCCATTGGGGTTGATCGCAGACAATTGCTTAACTTTATATCAATTTGTCTTTAGGGTGGAATATATACTCTGCCCAGCCATTTATCAGCTGGTGCGAGGGATTTGATTCCGAGGATGCTTATAGTCGACCCAATGAAGCGAATGACTATTCCTGAGATTCGCCTGCACCCTTGGTTCCAAGCTCATTTGCCACGCTATTTGGCCGTGCCTCCACCAGATACAACCCAACAAGCAAAGAAGGTTAGATTGAATGTACATTTGACTATTAATGATTAGTGTTTTTCTGCCTTAATGTTTCACATGCAACAAGTTATACATGGCAGGATAGAAATTTTCCCCAGCTTTTACTTATTTGTTATCCCATATAAACGGCACTAAAGCAGTATTCTTATGATCAAACACAGCTTATTTCTTGATTGTAATGCGATGGAATCACTCTAGGCAATTCTCTATCTTCTTTTGCATCTTTGATTGCCTTAAATGGTAGATTCTATTTATTTAACCTATCAAAATCTTTCTGTCACCCTCCCCTGCGCCCAGGTAAAAGAGTGAAAAAGAATGATCAGAATTGCTCATATATCTTGAGCAGTTTGTATAATTTAGGAAATGTTGGAGGTACCTGAACAATGGGGAAAGTTTATGATTGCTGTGGAAGTTCCTGTCATCAGAGCCTCATAAATCTTCCTTTTTGGTAAAAAGACATCGAAAAAACAAATTAGAATAAAGACATTAAAAAAGTTGATCAGTAGTTTCCCCTTATGGCAAACACACAATTGTGCATCTTAAAGAAGGGTCAGATTTGTGATTTGTCTTGCTGTCACAACCATATCTTGTTGCGCTAGATATTCTCTTCAATGTGTTGATCACGATATCCTTGTTCACTCATCCAACCTTATTAGCTCTCTAACCCACTTCCGTAAATATCACATGTTTATCTAATAAATCAGGATCCATTTTGGGTCCTTTGAATAAAAAATAAACGTTTTAGTAGTTCTGACCTTCTTCACCCTTAGTTTGTGATGAAGTCACAATCTAGTTTTGTTAGTTTTACAGTTTTACTCCAGGTCCATTCTGCGAAAACCACCACCAGATAAATATAAGCAGATAGTTCAGCTGCTTATTATATTTGGGAAATTCTTCCAAGGTCCAAGGATGTGGACTAGGGTCAATAAAGTGGGTGCAAACCTTGTAGATCAGGGTCTCCTAATCCCATAGAGACAAAAAACACTTGTTATTTCGTTCCTTATGTTTAAGCCCTAGTGAGTAGTGATAAGAATCGGGTTTTACTTGAATAAACTAGAAAACAATGCGAAAGCAAAAATACAAAGATTAATGACAAGAAATTAGAGAATAAAATTCCCTAGTTCAAAAGTAGTCCTAAGAATCCTAATTGATCTTAGTGTTCAGAAATTAGCAGATTAGAGCTAATTTATGATACTGATAGAGTCAATTCAAGAACTTAGATCAATAATTACCTTCTTTAATTTACTAATAAGAGCCAAAGATATCAAGTTAATTACCTCTTAAAGATTTGTTCTTAAAAGGTTGTAATCCCCAATAGCCATACACAGGTGTAAAGTAGATAAACTCTCAATTAACAATAAAGTTGTCTACACAAAAATAATAAAATCTACCCCTATATATTGGGGAAAACTATCCAAATAGAATTGGATTAGAATCTACTTTTATGGAAATAATAACTAAAATCTAACCAGGAAACTTTTAGCTAGGAAAGCATATAAGAATTTTATAATTCTTCCCCAAAGAAATAAGGAAAAGTTTTCAATTTTGACCAGAACACGTGGGCCCTTCCCAAGCCACTTGTATGCGACTCTTTTCTCCCTTCTGGGTGAGTTTTTTAAGCTCATTCTTTTAGGCAGAAATTTCAGCCGCATGTGGGCCTCAATCATCTTCCTTTTGGGCTTGGACTTGAACCATAAAATATGCGTAGCACTTAGTCCATTCTTCTCATCATTCTTGGACTCGTTCTTGGGCTTTTCTTCCATGCTAACCATCTTCTTGATTTCCAATTGAAACCCTACAATCTTGACTTGCAACTCCTTAGCTCGAGACCTTGACGATTGTGCTATTAGGGCTTCTACAACATCATCCTGGTGCTCAGAGTAATCAGGTATGTGCAGGGGGGAAGGTAGTAGGAGCCCAGTGAGGTGCCTGTAAGCTGGCATGAATACAATAGTTGGCCAAAAGAATTGTATTTATGAATTTTCTATATTCCTTGATATGCTTGGGATGTCTTGGTGCATCACCGCATCTTCTTTGATTTATTTATTTATTTTTCTAAATGCTTCTATTATCACATTTACTACAATTTGACTTGTATGGTTGTTGGGACTTTCTTTGTGGTGATTTCATATGTTAAGCTTTTTGTATGACCTTACAGCTCTTAACATGGTTTCTTAAACCAGAAGAATTCTCATCTAGTCAAAATATCCTTGAAAATATCTGATTGCAGATCGATGAAGAGATTCTTCAAGAGGTGGTTAAGATGGGATTTGACAGGAACAACCTTACTGAGTCTCTTCGCAATAGAGTTCAAAATGAGGTAAATTTTCGTTATCAGCTATCTATTTTTTCCTTGATTGCCCTTTTCCCTCAATTTTAGTTGTATTTCAGGGCACTGTTGCATACTATCTGCTCCTGGACAATCGCCATCGTGTTTCCACTGGCTATCTTGGAGCTGAATTTCAGGAGTCCATGGTGCGTCTTTGCTTGTTTTTATTGAATAAAGCTGCAGTTTCTTTCCATCTGCTTTCGTGAGAAGGAGCCAATTAGTTTGCCAATATTTAATGAGTTTCTTGTCCATAAATATGTTACATCTTTATGACAGTCACTGAGTTCATCAACATTAAGCTTGCGTATGTAGTTGTGGTTGATTTTTTTGCTGTTATATGTGTTTAATTGGATGTATAAAAATGCCCTTGCAGGAATATGGTTACAACCGGATCAATTCTAATGAAACCGCTGCTTCCCCTGTTGGTCAACGTTTCCCAGGAATAATGGATTATCAGCAAGCTGGTGCAAGACAGTTCCCCATTGAAAGAAAATGGGCTCTTGGCCTCCAGGTTGGTTTGCTGCCTCATGCAAATAACTAACTTTGCTCTCTCTTATATTTTTTGTTTACTAATCATTGGAGTCATATGACCCTGCTCCTCTACCTTCTCTTACCCCCCTATATTGAAGCCCTGGGGGCTGGATATTCATGTTAACATGTGACTGGAGGGAAGGGCCAAGTATGAGACCTTTTTTTTATTTATTATGGAAATTGAAGTACTAATAAGCTTTGAAAACTTCCGTGATCCTATTTTATATTCAATCTGATTAACTTTGAAAACATCTTGCCAATTCCATCTATAATAAGTATAGGCTCATGCATGTACAACCTTTGTTAATTTGATGGGTTCTCTTGAGAAATTTTCTAGATAATTTGCTTCTAAATTCTTTTCAACAGTATGCTATACATAATAAACGCCTTTTTTTGCTACAGTCTCGAGCGCATCCACGTGAAATAATGACTGAAGTTTTGAAAGCTCTGCAAGAACTGAATGTATGTTGGAAAAAGATTGGTCAGTATAACATGAAATGTCGATGGGTTCCTAGCTTACCTGGTCATCATGAAGGCATGGGTGTTAATTCCATGCATGGGAATCAGTTCTTTGGAGATGATTCATCCATCATTGAGAATGATGGGGCCACAAAGTTAACAAATGTGGTCAAGTTTGAAGTTCAGGTATGAAAAATTTCATGGATCATACATCTAGTTTCTGTCTAACTTCTTCATACAGGAGTACATGAATGTTGCTTTGGCCTTAAGATAGAATTTAGAGGGCACTTGTATATCATGAAAATAAGAAAAGCTTTAGTAACACGGTCAATCTTAATGACATTAACAAAGAATTGGGTGAGAAAGTAGTCTGCACTAGCAGTAATGAAGTATGTTGCACATAATTGGTGGAAGTCTTACTTGTATCCCTGTATTCTTTCTAAGAAAGTAGCTCGGTTCTTTGTGCTTGCCTATGTGTTTTAGATGCAAATCTTTGGAAAATTACTTGTGACTAAATCTCACCATGTCGAATTTTATGATACTGTAAATCCAAGTTGCTGGTCTTTTTGTTAGATTTACCTCTATTATTAGAATTTGAGGGGGGGTTGTCACTGCCTCACTGGTGACTCAGAAAAGTGCTTTTTAGGTTGGTTTGAACATTTGAATGCATGTGAATTGGTCCTTGTATTATCTGAAGAGGACAAAGTCTTACTTCTTTGGTGATTTGATCACTTCTGCCCAAAACCTTGGTAGGCAAAGTAACCTGATATTTGTGTTGGTAAGAGGTAGTAAGTACCTGTTGGAATTAGCCGAGGTGCACACAAATTGGCCCGGATAGGAACACTATTGTTTGGATCTGCTGGTTTTCTGAGTCTTGCACAGCTTGTATGGTTCTGAAATTTTATTTGATGTTTGTGTTCCTTTTGGCGCAGCTTTACAAAACCAGGGAGGAGAAGTACTTGCTTGACCTTCAGAGACTTCAGGGTCCACAATTCCTCTTCCTGGATCTCTGTGCTGCTTTTCTTGCTCAGCTTCGAGTACTTTAAAGTCTCCGAAATAAGGAGCTAAGTTGGAAAAAGCCCATGCTTGTATATAATTGGTATACCAGCTCAGTTACTGCATTTTGTCTTGTTAACAAATTCCACCCTGCTTGGTCAGAGGTGCCTAGCAACTCTTTTTTTCTTTTGATTCGCTAGGAGATCTAGCTCACTCTCTTTTTTAACGTTTATGGAATTTCAGTTACCTACAGTATCTACTTACAGATTGAACTGCAAGATGAGCGCGATGTCTGTCTGTGACCCATTCCCTCTTCTCCCCTTATCGACGATCATTTGGAGTCCAACGAAGATTTTCTTGTGTCAAATTTGAAATGTTTGTCTGAATAAAAACAAGTCCC</genome_strand>
        <mrna_strand>GTGAATACCAGGGGGGAAAAATTAACAGAATCAAAAATCAGTGAACTCCATTCTTGTGCTTCTGCAGCCATCCTTACCCCCACCCCCCGAATCTCCTCCACCCCACGACTGGCCTCAACTTCTTCCCCCTGTATTCCAGGAGGCCATTGATACTCTCTTTCATCACCAAATGTTGAAGATAATCGCTTGATTTTCCCAATTTTCATATTTTGTTGTTGAATTTCTTCAATCTGCTTCTTGGGGTTTAGCTTCTGCCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAATGGACGGAACAGCAGTGCAGGGCACCAGCAGTGTTGACTCATTTTTACGGAACTATAAACTCGGGAAAACACTTGGCATTGGATCGTTCGGCAAAGTTAAAATAGCTGAACATACGTTAACAGGGCACAAAGTTGCTGTCAAGATTCTTAATCGTCGAAAAATCAGGAATATGGACATGGAGGAGAAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGTAGAGAAATCAAAATATTGAGATTGTTCATGCATCCTCATATTATACGGCTTTATGAGGTCATAGAGACACCATCAGATATATATGTTGTGATGGAGTATGTGAAATCTGGCGAGTTATTTGATTACATTGTTGAGAAGGGCAGATTGCAGGAGGATGAAGCTCGTAACTTTTTTCAGCAG........................................................................................ATAATTTCTGGTGTGGAGTACTGCCATAGAAACATGGTGGTTCATAGAGACCTTAAGCCTGAAAACCTCCTTCTGGACTCCAAATGGAATGTGAAGATCGCAGATTTTGGTTTGAGCAATATCATGCGCGATGGTCATTTTCTGAAGACAAGTTGCGGAAGCCCAAACTATGCTGCCCCAGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATATCAGGTAAATTGTATGCTGGCCCTGAGGTAGATGTATGGAGCTGTGGTGTTATTCTTTATGCTCTTCTCTGTGGCACCCTTCCGTTTGACGATGAAAACATACCCAATCTTTTTAAGAAAATAAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGAATATATACTCTGCCCAGCCATTTATCAGCTGGTGCGAGGGATTTGATTCCGAGGATGCTTATAGTCGACCCAATGAAGCGAATGACTATTCCTGAGATTCGCCTGCACCCTTGGTTCCAAGCTCATTTGCCACGCTATTTGGCCGTGCCTCCACCAGATACAACCCAACAAGCAAAGAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGATGAAGAGATTCTTCAAGAGGTGGTTAAGATGGGATTTGACAGGAACAACCTTACTGAGTCTCTTCGCAATAGAGTTCAAAATGAG.......................................................................GGCACTGTTGCATACTATCTGCTCCTGGACAATCGCCATCGTGTTTCCACTGGCTATCTTGGAGCTGAATTTCAGGAGTCCATG...................................................................................................................................................................................................................................GAATATGGTTACAACCGGATCAATTCTAATGAAACCGCTGCTTCCCCTGTTGGTCAACGTTTCCCAGGAATAATGGATTATCAGCAAGCTGGTGCAAGACAGTTCCCCATTGAAAGAAAATGGGCTCTTGGCCTCCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCGAGCGCATCCACGTGAAATAATGACTGAAGTTTTGAAAGCTCTGCAAGAACTGAATGTATGTTGGAAAAAGATTGGTCAGTATAACATGAAATGTCGATGGGTTCCTAGCTTACCTGGTCATCATGAAGGCATGGGTGTTAATTCCATGCATGGGAATCAGTTCTTTGGAGATGATTCATCCATCATTGAGAATGATGGGGCCACAAAGTTAACAAATGTGGTCAAGTTTGAAGTTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTACAAAACCAGGGAGGAGAAGTACTTGCTTGACCTTCAGAGACTTCAGGGTCCACAATTCCTCTTCCTGGATCTCTGTGCTGCTTTTCTTGCTCAGCTTCGAGTACTTTAAAGTCTCCGAAATAAGGAGCTAAGTTGGAAAAAGCCCATGCTTGTATATAATTGGTATACCAGCTCAGTTACTGCATTTTGTCTTGTTAACAAATTCCACCCTGCTTGGTCAGAGGTGCCTAGCAACTCTTTTTTTCTTTTGATTCGCTAGGAGATCTAGCTCACTCTCTTTTTTAACGTTTATGGAATTTCAGTTACCTACAGTATCTACTTACAGATTGAACTGCAAGATGAGCGCGATGTCTGTCTGTGACCCATTCCCTCTTCTCCCCTTATCGACGATCATTTGGAGTCCAACGAAGATTTTCTTGTGTCAAATTTGAAATGTTTGTCTGAATAAAAACAAGTCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0190N21-cHQgB/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U565964" ref_strand="+" ref_description="SGN-U565964 Tomato 200607#2 [2 ESTs aligned] ">
      <seq>actctcagaaattacgtcaaattaccatcttatccttcttcttcttcctctcaattctctctgtttttctttttttttttcagaaaaaaatttccacaaaaacaaatccaaaagagcttggatcccacccgtttggacccatttgctctttctagtttcttctcctttctctctctctgtttcttgaaatttttttcattttttttttcacagagagggagacctacattcatttattattattgttaatggtgttttcttcattcaaaaaacaaaaaggtatacataatttcgtgagttccaatccaaatttacatctttgcatggtgtgcatcaccaattagcagacagatttgtgagctgagtagtaataatgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0190N21-cHQgB/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0190N21.3" temp_strand="+" temp_description="C02HBa0190N21.3  AC215414.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0190N21 sequenced_by:kribb upload_account_name:korea">
        <position start="141226" stop="143808"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="141526" g_stop="141809" g_length="284"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="279" r_length="279" r_score="0.951"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="141810" i_stop="143411" i_length="1602">
            <donor d_prob="0.957" d_score="0.92"/>
            <acceptor a_prob="0.917" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="143412" g_stop="143508" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="280" r_stop="377" r_length="98" r_score="0.948"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0190N21.3" gen_strand="+" ref_id="SGN-U565964" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>381</cumulative_length_of_scored_exons>
        <coverage percentage="1.011" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0190N21.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U565964" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="141526" e_stop="141809"/>
          <exon e_start="143412" e_stop="143508"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTCTCAGAAATTACGTCAAATTACCATCTTATCCTTCTTCTTCTTCTTCCTCTCAATTCTCTCTGTTTTTC-TTTTTTTTTTCAGAAAAAAATTTCCACAGAAACAAATCCAAAAGAGCTTGGATCCGACCCGTTTGGACCCATTTGCTCTTTCTAGTTTCTTCTCCTTTCTCTCTCTCTGTTTCTTGAAATTTTTTTCA-TTTTTTTTTCACAGAGAGGGAGACCTACATTCATTTATTATTATTATTGTTAATGGTGTTCTCTTCATTCAAAAAAACAAAAAGGTATGAACTTTTTCATGTATATATATTGATGGTGGGTATCTACCAGAATTTACAACTGATGTCCCATTTTTTGTGTTGCGGGGTATGACTTGTTTGAGATCGAGACGTAGTTGGTGCTTTGTTATTAATTATTTACCTTAAAGTTGGGGGTTGGAATTAATTTTTTTTGAAATTTTGGTAACATATTCATCCCATGTATTTCTTAATTCTTGACCTATTGATTAGTAGCTTGTTGTATTGTGATTTTTTTTTTTGCTGTTTTCGTTCTTGATATTTTATAGCTGCATTTGAGTTTGAGAGTTTTTTTGAAAAACAACTTTTTCTGTATCACAAAATATTAATAAAGATTTGCGTACATTTTATACTTCTCGAGATGTATTGTTGTTGTTCTCATCATCATTCTTTATATTTTGTCTTTTTCCGCTTTTTAAAGCAATTGCTTTGTTAATTTTTTTTTCTTTTTTTTTCTTTTTATAGTTTCTAACAACTTTGGTGTTGTTATTCTTTTGTTTGTTTGTTTTGTGTTATGATGTTAATGTGGACCTATTTTTTGCTTCATTCTCTCTTATGCATAATCTGACAATTGTTTTGTCTGATTCAGTCTCTGAAAGTGAATACAAGGTCATCTTCAATTCCATCCTTTTTCATCATTAACAATTTTAATATACAGGACAAGGAAAATATAAAAATAAAAAATGAGAGAAAAAGCAGTTTATTACATTTATATCGAACACCTTTTTAGTTATGTCTCTAAATTATCTACTTTTTCTTATGTGTAGCACATGAAATTATTATAGTTTGTTTCATTAGTTTCTTTGCATTTAGCCATCTTTGTGTTCTTTTTTGCTTCTTTTTTTTGGTCAGTAATATTCTTGTATTACATCTGTTTTTTGAGGTTCACTGCTTTTAAAAGCCTGTTAAAAACAGCTTTTGTCTCATTTTTTTGAGTTTTATTCTAAAGCATATATAAGATTTTGAAAACTGCTAAATCAAGATTCATTTGTAGATTTTACTATTAGTTTCAGATGTTAAGTACTTCTTTAAGGTAAGCCTTTTGTACTCCAGTAATCGCAAATGCAGATAATGTATTGAATCAAATTTCAAACTCATTTACTAGTCATATCTTTGTAGTTCATGTGATTGTGACTTTAAGCCCCAATTGCATCATAGGAATTCGAAAAAAAGGGTTCTTTCGTATACTTATAGTAACTATTGTCACTTCTTTTTTGATTTTGATAGTTTCTGCGGTTCCAATTTCTGGGAGCATTATGTTGAGTCACTCCAAGAGTAGAATCAGCAGCTCACCTCACGTTTTAGGAACCGAGGAATCACACGTAGACGGACCTGAGCATTCTCCTGCTCTACGGTCTTGACGTAGACGCTGTTATGTTTTCTGTATTGTCGTTTTTCCTTTCAATTATTACTTTGATTTGCTTCTTCACTTGAGACGAGGGTCTTTCAAAAACAGTTTCTCTACCTCCATAGGAAAAGGTCTGCATACGCTACACCCTCCCAGACCCTACTTTGTGAGATTTCACTGAATATGTTATTATAAGGAATTGTATATTCAGAGATTTCAAGTTTCTCTTGTTCATGTTCCAGGTATACATAATTTCGTGAG-TCCAATCGAAATTTACATCTTTGCATGGTGTTCATCAGCAATTAGCAGACAGATTTGTGAGCTGAGTAGTAATAATGG</genome_strand>
        <mrna_strand>ACTCTCAGAAATTACGTCAAATTACCATCTTAT-C--CTTCTTCTTCTTCCTCTCAATTCTCTCTGTTTTTCTTTTTTTTTTTCAGAAAAAAATTTCCACAAAAACAAATCCAAAAGAGCTTGGATCCCACCCGTTTGGACCCATTTGCTCTTTCTAGTTTCTTCTCCTTTCTCTCTCTCTGTTTCTTGAAATTTTTTTCATTTTTTTTTTCACAGAGAGGGAGACCTACATTCA--T-TTATTATTATTGTTAATGGTGTTTTCTTCATTC-AAAAAACAAAAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATACATAATTTCGTGAGTTCCAATCCAAATTTACATCTTTGCATGGTGTGCATCACCAATTAGCAGACAGATTTGTGAGCTGAGTAGTAATAATGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>21</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="25664" PGL_stop="31402"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="25664" e_stop="25766"/>
            <exon e_start="26732" e_stop="27029"/>
            <exon e_start="29700" e_stop="29731"/>
            <exon e_start="29812" e_stop="29862"/>
            <exon e_start="31141" e_stop="31202"/>
            <exon e_start="31295" e_stop="31402"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.732" acc_prob="0.594" e_score="0.981"/>
          <exon-intron don_prob="0.969" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.945" acc_prob="0.964" e_score="0.969"/>
          <exon-intron don_prob="0.796" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.930" acc_prob="0.783" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.981">
            <gDNA_exon_boundary e_start="25664" e_stop="25766" e_length="103"/>
          </exon>
          <intron i_serial="1" don_prob="0.732" acc_prob="0.594">
            <gDNA_intron_boundary i_start="25767" i_stop="26731" i_length="965"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="26732" e_stop="27029" e_length="298"/>
          </exon>
          <intron i_serial="2" don_prob="0.969" acc_prob="0.999">
            <gDNA_intron_boundary i_start="27030" i_stop="29699" i_length="2670"/>
          </intron>
          <exon e_serial="3" e_score="0.969">
            <gDNA_exon_boundary e_start="29700" e_stop="29731" e_length="32"/>
          </exon>
          <intron i_serial="3" don_prob="0.945" acc_prob="0.964">
            <gDNA_intron_boundary i_start="29732" i_stop="29811" i_length="80"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="29812" e_stop="29862" e_length="51"/>
          </exon>
          <intron i_serial="4" don_prob="0.796" acc_prob="0.987">
            <gDNA_intron_boundary i_start="29863" i_stop="31140" i_length="1278"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="31141" e_stop="31202" e_length="62"/>
          </exon>
          <intron i_serial="5" don_prob="0.930" acc_prob="0.783">
            <gDNA_intron_boundary i_start="31203" i_stop="31294" i_length="92"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="31295" e_stop="31402" e_length="108"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25664" stop="25766"/>
              <exon start="26732" stop="27029"/>
              <exon start="29700" stop="29731"/>
              <exon start="29812" stop="29862"/>
              <exon start="31141" stop="31202"/>
              <exon start="31295" stop="31402"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U588435" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGGCTAACCAATCGACAGAATTAAATCAACAAAATCAGATCGAATCGTCGGCATCTCGCCGGAAATAGATCTCCGTCTCACGAATTCCGAGCTCTTTCTCCTG : ACTTTATCAGTCCATGTTTCTATAACGGCATAAGCAGAAACAAGGCTGGTGCATTACAATCATTGTTAAGGAATGAATACAGACGTTGAGCTAAATTTTCACCTCGTAACTGCACAGATCTCCTGGATCCGAGTTTATTGATTTTTGGATTTGAGAGACTTACATTGTAATATAGGGAGGTGGAGCCATTTGAATCACCAAGTGACTTACAATGATGATCAGCAAAGAGCTTTTATTGACTTACGTTTATCTCCTTGTCTATATCGTGCTTTCATCAGGAGTTATTTTGTATAACAAG : GTGGTGTCGCCTGTCAAGATGACTCTTGAAAT : ATATGCAACGTGCGTTATTCCAATCAGTGCTTTCTTTGCTGCAAGTCTTTG : GTTTGGCAACACCGCATATTTGTTCATTTCAGTGGCCTTCATCCAGATGCTCAAAGCTCTGA : TGCCGGTGGCCACATTTGTCATGGCTGTTATTTGTGGAACTGACAAACTAAGATGCGATGTATTCTTGAACATGTTTTTGGTCAGTGTTGGTGTTGTAATATCCTCCT</gDNA_template>
            <first_frame> G  L  T  N  R  Q  N  *  I  N  K  I  R  S  N  R  R  H  L  A  G  N  R  S  P  S  H  E  F  R  A  L  S  P   : D  F  I  S  P  C  F  Y  N  G  I  S  R  N  K  A  G  A  L  Q  S  L  L  R  N  E  Y  R  R  *  A  K  F  S  P  R  N  C  T  D  L  L  D  P  S  L  L  I  F  G  F  E  R  L  T  L  *  Y  R  E  V  E  P  F  E  S  P  S  D  L  Q  *  *  S  A  K  S  F  Y  *  L  T  F  I  S  L  S  I  S  C  F  H  Q  E  L  F  C  I  T  R :   W  C  R  L  S  R  *  L  L  K   : Y  M  Q  R  A  L  F  Q  S  V  L  S  L  L  Q  V  F   : G  L  A  T  P  H  I  C  S  F  Q  W  P  S  S  R  C  S  K  L  *  :  C  R  W  P  H  L  S  W  L  L  F  V  E  L  T  N  *  D  A  M  Y  S  *  T  C  F  W  S  V  L  V  L  *  Y  P  P </first_frame>
            <second_frame>  G  *  P  I  D  R  I  K  S  T  K  S  D  R  I  V  G  I  S  P  E  I  D  L  R  L  T  N  S  E  L  F  L  L  :  T  L  S  V  H  V  S  I  T  A  *  A  E  T  R  L  V  H  Y  N  H  C  *  G  M  N  T  D  V  E  L  N  F  H  L  V  T  A  Q  I  S  W  I  R  V  Y  *  F  L  D  L  R  D  L  H  C  N  I  G  R  W  S  H  L  N  H  Q  V  T  Y  N  D  D  Q  Q  R  A  F  I  D  L  R  L  S  P  C  L  Y  R  A  F  I  R  S  Y  F  V  *  Q   : G  G  V  A  C  Q  D  D  S  *  N  :  I  C  N  V  R  Y  S  N  Q  C  F  L  C  C  K  S  L  :  V  W  Q  H  R  I  F  V  H  F  S  G  L  H  P  D  A  Q  S  S  D :   A  G  G  H  I  C  H  G  C  Y  L  W  N  *  Q  T  K  M  R  C  I  L  E  H  V  F  G  Q  C  W  C  C  N  I  L   </second_frame>
            <third_frame>   A  N  Q  S  T  E  L  N  Q  Q  N  Q  I  E  S  S  A  S  R  R  K  *  I  S  V  S  R  I  P  S  S  F  S  * :   L  Y  Q  S  M  F  L  *  R  H  K  Q  K  Q  G  W  C  I  T  I  I  V  K  E  *  I  Q  T  L  S  *  I  F  T  S  *  L  H  R  S  P  G  S  E  F  I  D  F  W  I  *  E  T  Y  I  V  I  *  G  G  G  A  I  *  I  T  K  *  L  T  M  M  I  S  K  E  L  L  L  T  Y  V  Y  L  L  V  Y  I  V  L  S  S  G  V  I  L  Y  N  K  :  V  V  S  P  V  K  M  T  L  E  I :   Y  A  T  C  V  I  P  I  S  A  F  F  A  A  S  L  W :   F  G  N  T  A  Y  L  F  I  S  V  A  F  I  Q  M  L  K  A  L   : M  P  V  A  T  F  V  M  A  V  I  C  G  T  D  K  L  R  C  D  V  F  L  N  M  F  L  V  S  V  G  V  V  I  S  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0190N21.3" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="26937" stop="27029"/>
                    <exon start="29700" stop="29731"/>
                    <exon start="29812" stop="29862"/>
                    <exon start="31141" stop="31202"/>
                    <exon start="31295" stop="31401"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>345</number_coding_nucleotides>
                  <number_encoded_amino_acids>115</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LTMMISKELLLTYVYLLVYIVLSSGVILYNKVVSPVKMTLEIYATCVIPISAFFAASLWFGNTAYLFISVAFIQMLKALMPVATFVMAVICGTDKLRCDVFLNMFLVSVGVVISS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="25664" e_stop="25766"/>
            <exon e_start="26732" e_stop="27029"/>
            <exon e_start="28132" e_stop="28239"/>
            <exon e_start="29700" e_stop="29731"/>
            <exon e_start="29812" e_stop="29862"/>
            <exon e_start="31141" e_stop="31202"/>
            <exon e_start="31295" e_stop="31382"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.732" acc_prob="0.594" e_score="0.981"/>
          <exon-intron don_prob="0.969" acc_prob="0.954" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.945" acc_prob="0.964" e_score="0.969"/>
          <exon-intron don_prob="0.796" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.930" acc_prob="0.783" e_score="1.000"/>
          <exon-only e_score="0.943"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.981">
            <gDNA_exon_boundary e_start="25664" e_stop="25766" e_length="103"/>
          </exon>
          <intron i_serial="1" don_prob="0.732" acc_prob="0.594">
            <gDNA_intron_boundary i_start="25767" i_stop="26731" i_length="965"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="26732" e_stop="27029" e_length="298"/>
          </exon>
          <intron i_serial="2" don_prob="0.969" acc_prob="0.954">
            <gDNA_intron_boundary i_start="27030" i_stop="28131" i_length="1102"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="28132" e_stop="28239" e_length="108"/>
          </exon>
          <intron i_serial="3" don_prob="0.987" acc_prob="0.999">
            <gDNA_intron_boundary i_start="28240" i_stop="29699" i_length="1460"/>
          </intron>
          <exon e_serial="4" e_score="0.969">
            <gDNA_exon_boundary e_start="29700" e_stop="29731" e_length="32"/>
          </exon>
          <intron i_serial="4" don_prob="0.945" acc_prob="0.964">
            <gDNA_intron_boundary i_start="29732" i_stop="29811" i_length="80"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="29812" e_stop="29862" e_length="51"/>
          </exon>
          <intron i_serial="5" don_prob="0.796" acc_prob="0.987">
            <gDNA_intron_boundary i_start="29863" i_stop="31140" i_length="1278"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="31141" e_stop="31202" e_length="62"/>
          </exon>
          <intron i_serial="6" don_prob="0.930" acc_prob="0.783">
            <gDNA_intron_boundary i_start="31203" i_stop="31294" i_length="92"/>
          </intron>
          <exon e_serial="7" e_score="0.943">
            <gDNA_exon_boundary e_start="31295" e_stop="31382" e_length="88"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25664" stop="25766"/>
              <exon start="26732" stop="27029"/>
              <exon start="28132" stop="28239"/>
              <exon start="29700" stop="29731"/>
              <exon start="29812" stop="29862"/>
              <exon start="31141" stop="31202"/>
              <exon start="31295" stop="31382"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U562730" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGGCTAACCAATCGACAGAATTAAATCAACAAAATCAGATCGAATCGTCGGCATCTCGCCGGAAATAGATCTCCGTCTCACGAATTCCGAGCTCTTTCTCCTG : ACTTTATCAGTCCATGTTTCTATAACGGCATAAGCAGAAACAAGGCTGGTGCATTACAATCATTGTTAAGGAATGAATACAGACGTTGAGCTAAATTTTCACCTCGTAACTGCACAGATCTCCTGGATCCGAGTTTATTGATTTTTGGATTTGAGAGACTTACATTGTAATATAGGGAGGTGGAGCCATTTGAATCACCAAGTGACTTACAATGATGATCAGCAAAGAGCTTTTATTGACTTACGTTTATCTCCTTGTCTATATCGTGCTTTCATCAGGAGTTATTTTGTATAACAAG : TGGGTGCTTTCACCAAAATATTTCAATTTCCCACTCCCAATTACACTTACCATGATACATATGGGCTTTTCAGGCTTAGTGGCTTTCTTTCTTGTCCGTGTCTTCAAG : GTGGTGTCGCCTGTCAAGATGACTCTTGAAAT : ATATGCAACGTGCGTTATTCCAATCAGTGCTTTCTTTGCTGCAAGTCTTTG : GTTTGGCAACACCGCATATTTGTTCATTTCAGTGGCCTTCATCCAGATGCTCAAAGCTCTGA : TGCCGGTGGCCACATTTGTCATGGCTGTTATTTGTGGAACTGACAAACTAAGATGCGATGTATTCTTGAACATGTTTTTGGTCAGTGT</gDNA_template>
            <first_frame> G  L  T  N  R  Q  N  *  I  N  K  I  R  S  N  R  R  H  L  A  G  N  R  S  P  S  H  E  F  R  A  L  S  P   : D  F  I  S  P  C  F  Y  N  G  I  S  R  N  K  A  G  A  L  Q  S  L  L  R  N  E  Y  R  R  *  A  K  F  S  P  R  N  C  T  D  L  L  D  P  S  L  L  I  F  G  F  E  R  L  T  L  *  Y  R  E  V  E  P  F  E  S  P  S  D  L  Q  *  *  S  A  K  S  F  Y  *  L  T  F  I  S  L  S  I  S  C  F  H  Q  E  L  F  C  I  T  S :   G  C  F  H  Q  N  I  S  I  S  H  S  Q  L  H  L  P  *  Y  I  W  A  F  Q  A  *  W  L  S  F  L  S  V  S  S  R :   W  C  R  L  S  R  *  L  L  K   : Y  M  Q  R  A  L  F  Q  S  V  L  S  L  L  Q  V  F   : G  L  A  T  P  H  I  C  S  F  Q  W  P  S  S  R  C  S  K  L  *  :  C  R  W  P  H  L  S  W  L  L  F  V  E  L  T  N  *  D  A  M  Y  S  *  T  C  F  W  S  V  </first_frame>
            <second_frame>  G  *  P  I  D  R  I  K  S  T  K  S  D  R  I  V  G  I  S  P  E  I  D  L  R  L  T  N  S  E  L  F  L  L  :  T  L  S  V  H  V  S  I  T  A  *  A  E  T  R  L  V  H  Y  N  H  C  *  G  M  N  T  D  V  E  L  N  F  H  L  V  T  A  Q  I  S  W  I  R  V  Y  *  F  L  D  L  R  D  L  H  C  N  I  G  R  W  S  H  L  N  H  Q  V  T  Y  N  D  D  Q  Q  R  A  F  I  D  L  R  L  S  P  C  L  Y  R  A  F  I  R  S  Y  F  V  *  Q   : V  G  A  F  T  K  I  F  Q  F  P  T  P  N  Y  T  Y  H  D  T  Y  G  L  F  R  L  S  G  F  L  S  C  P  C  L  Q   : G  G  V  A  C  Q  D  D  S  *  N  :  I  C  N  V  R  Y  S  N  Q  C  F  L  C  C  K  S  L  :  V  W  Q  H  R  I  F  V  H  F  S  G  L  H  P  D  A  Q  S  S  D :   A  G  G  H  I  C  H  G  C  Y  L  W  N  *  Q  T  K  M  R  C  I  L  E  H  V  F  G  Q  C </second_frame>
            <third_frame>   A  N  Q  S  T  E  L  N  Q  Q  N  Q  I  E  S  S  A  S  R  R  K  *  I  S  V  S  R  I  P  S  S  F  S  * :   L  Y  Q  S  M  F  L  *  R  H  K  Q  K  Q  G  W  C  I  T  I  I  V  K  E  *  I  Q  T  L  S  *  I  F  T  S  *  L  H  R  S  P  G  S  E  F  I  D  F  W  I  *  E  T  Y  I  V  I  *  G  G  G  A  I  *  I  T  K  *  L  T  M  M  I  S  K  E  L  L  L  T  Y  V  Y  L  L  V  Y  I  V  L  S  S  G  V  I  L  Y  N  K  :  W  V  L  S  P  K  Y  F  N  F  P  L  P  I  T  L  T  M  I  H  M  G  F  S  G  L  V  A  F  F  L  V  R  V  F  K  :  V  V  S  P  V  K  M  T  L  E  I :   Y  A  T  C  V  I  P  I  S  A  F  F  A  A  S  L  W :   F  G  N  T  A  Y  L  F  I  S  V  A  F  I  Q  M  L  K  A  L   : M  P  V  A  T  F  V  M  A  V  I  C  G  T  D  K  L  R  C  D  V  F  L  N  M  F  L  V  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0190N21.3" strand="+"/>
                <serials PGL_serial="1" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="26937" stop="27029"/>
                    <exon start="28132" stop="28239"/>
                    <exon start="29700" stop="29731"/>
                    <exon start="29812" stop="29862"/>
                    <exon start="31141" stop="31202"/>
                    <exon start="31295" stop="31380"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>432</number_coding_nucleotides>
                  <number_encoded_amino_acids>144</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LTMMISKELLLTYVYLLVYIVLSSGVILYNKWVLSPKYFNFPLPITLTMIHMGFSGLVAFFLVRVFKVVSPVKMTLEIYATCVIPISAFFAASLWFGNTAYLFISVAFIQMLKALMPVATFVMAVICGTDKLRCDVFLNMFLVS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="35958" PGL_stop="38392"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="35958" e_stop="36077"/>
            <exon e_start="36688" e_stop="36824"/>
            <exon e_start="38001" e_stop="38392"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.988" acc_prob="0.996" e_score="0.983"/>
          <exon-intron don_prob="0.985" acc_prob="0.982" e_score="1.000"/>
          <exon-only e_score="0.967"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.983">
            <gDNA_exon_boundary e_start="35958" e_stop="36077" e_length="120"/>
          </exon>
          <intron i_serial="1" don_prob="0.988" acc_prob="0.996">
            <gDNA_intron_boundary i_start="36078" i_stop="36687" i_length="610"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="36688" e_stop="36824" e_length="137"/>
          </exon>
          <intron i_serial="2" don_prob="0.985" acc_prob="0.982">
            <gDNA_intron_boundary i_start="36825" i_stop="38000" i_length="1176"/>
          </intron>
          <exon e_serial="3" e_score="0.967">
            <gDNA_exon_boundary e_start="38001" e_stop="38392" e_length="392"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35958" stop="36077"/>
              <exon start="36688" stop="36824"/>
              <exon start="38001" stop="38392"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U566336" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAAAAAAAAAAAAATTAAGAAATGCAACCATTCTGATATGTTGTTAACTAGTCATTATTGTTCAAAAATAGCAACTCATGGAGGCACAGTTGTGGTGCAATAAGACTTACAATTGTATAG : GGACAGAGACATGGAGAATTCAACATCCACTCCAAATTTTGCATACAAGTAATTGGCAACAACCTATTTTTCAGCCTTTTAATTCCTCAATTTCCCACAGTCTGACTTGTAGACACATCCACCGCAATGGAATAAAG : ACATTTGCTACAAGAAGGAGAAGATCAAACATAGAAACAGACACTTATGTACTAATGGAACCTGGGAAGTCAGAGGAATTTGTTACTGAGGAAGAATTAAGAGACAAGTTAAAGAGTTGGTTAGAAAATTGGCCAGCCAAAACACTGCCACCAGACCTTGCTAGATTTGAAGATAGTGATGATGCTGTTGAATATTTAGTAAAATCTGTTTGTGAACTTGAAATTGATGGAGATGTTGGTTCCCTACAATGGTACCAAGTTCGTTTACAACAAGACATCATATGAAAGGACTCTCGATTTTTTTATAATCCGTTATTTTTTAAATAACAGTTGATGTAATTTTTCTTTGTATCATTTTAATTTTATTAAAAAAAAACACTGTGATAATGACT</gDNA_template>
            <first_frame> Q  K  K  K  N  *  E  M  Q  P  F  *  Y  V  V  N  *  S  L  L  F  K  N  S  N  S  W  R  H  S  C  G  A  I  R  L  T  I  V  *  :  G  Q  R  H  G  E  F  N  I  H  S  K  F  C  I  Q  V  I  G  N  N  L  F  F  S  L  L  I  P  Q  F  P  T  V  *  L  V  D  T  S  T  A  M  E  *  R :   H  L  L  Q  E  G  E  D  Q  T  *  K  Q  T  L  M  Y  *  W  N  L  G  S  Q  R  N  L  L  L  R  K  N  *  E  T  S  *  R  V  G  *  K  I  G  Q  P  K  H  C  H  Q  T  L  L  D  L  K  I  V  M  M  L  L  N  I  *  *  N  L  F  V  N  L  K  L  M  E  M  L  V  P  Y  N  G  T  K  F  V  Y  N  K  T  S  Y  E  R  T  L  D  F  F  I  I  R  Y  F  L  N  N  S  *  C  N  F  S  L  Y  H  F  N  F  I  K  K  K  H  C  D  N  D  </first_frame>
            <second_frame>  K  K  K  K  I  K  K  C  N  H  S  D  M  L  L  T  S  H  Y  C  S  K  I  A  T  H  G  G  T  V  V  V  Q  *  D  L  Q  L  Y  R :   D  R  D  M  E  N  S  T  S  T  P  N  F  A  Y  K  *  L  A  T  T  Y  F  S  A  F  *  F  L  N  F  P  Q  S  D  L  *  T  H  P  P  Q  W  N  K   : D  I  C  Y  K  K  E  K  I  K  H  R  N  R  H  L  C  T  N  G  T  W  E  V  R  G  I  C  Y  *  G  R  I  K  R  Q  V  K  E  L  V  R  K  L  A  S  Q  N  T  A  T  R  P  C  *  I  *  R  *  *  *  C  C  *  I  F  S  K  I  C  L  *  T  *  N  *  W  R  C  W  F  P  T  M  V  P  S  S  F  T  T  R  H  H  M  K  G  L  S  I  F  L  *  S  V  I  F  *  I  T  V  D  V  I  F  L  C  I  I  L  I  L  L  K  K  N  T  V  I  M  T </second_frame>
            <third_frame>   K  K  K  K  L  R  N  A  T  I  L  I  C  C  *  L  V  I  I  V  Q  K  *  Q  L  M  E  A  Q  L  W  C  N  K  T  Y  N  C  I   : G  T  E  T  W  R  I  Q  H  P  L  Q  I  L  H  T  S  N  W  Q  Q  P  I  F  Q  P  F  N  S  S  I  S  H  S  L  T  C  R  H  I  H  R  N  G  I  K  :  T  F  A  T  R  R  R  R  S  N  I  E  T  D  T  Y  V  L  M  E  P  G  K  S  E  E  F  V  T  E  E  E  L  R  D  K  L  K  S  W  L  E  N  W  P  A  K  T  L  P  P  D  L  A  R  F  E  D  S  D  D  A  V  E  Y  L  V  K  S  V  C  E  L  E  I  D  G  D  V  G  S  L  Q  W  Y  Q  V  R  L  Q  Q  D  I  I  *  K  D  S  R  F  F  Y  N  P  L  F  F  K  *  Q  L  M  *  F  F  F  V  S  F  *  F  Y  *  K  K  T  L  *  *  *   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0190N21.3" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36029" stop="36077"/>
                    <exon start="36688" stop="36824"/>
                    <exon start="38001" stop="38285"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>468</number_coding_nucleotides>
                  <number_encoded_amino_acids>156</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QLMEAQLWCNKTYNCIGTETWRIQHPLQILHTSNWQQPIFQPFNSSISHSLTCRHIHRNGIKTFATRRRRSNIETDTYVLMEPGKSEEFVTEEELRDKLKSWLENWPAKTLPPDLARFEDSDDAVEYLVKSVCELEIDGDVGSLQWYQVRLQQDII*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="39589" PGL_stop="42485"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="39589" e_stop="39640"/>
            <exon e_start="40664" e_stop="40807"/>
            <exon e_start="40899" e_stop="40967"/>
            <exon e_start="41108" e_stop="41214"/>
            <exon e_start="41807" e_stop="42485"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.991" e_score="0.981"/>
          <exon-intron don_prob="0.916" acc_prob="0.932" e_score="0.979"/>
          <exon-intron don_prob="0.989" acc_prob="0.872" e_score="0.986"/>
          <exon-intron don_prob="0.919" acc_prob="0.994" e_score="1.000"/>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.981">
            <gDNA_exon_boundary e_start="39589" e_stop="39640" e_length="52"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.991">
            <gDNA_intron_boundary i_start="39641" i_stop="40663" i_length="1023"/>
          </intron>
          <exon e_serial="2" e_score="0.979">
            <gDNA_exon_boundary e_start="40664" e_stop="40807" e_length="144"/>
          </exon>
          <intron i_serial="2" don_prob="0.916" acc_prob="0.932">
            <gDNA_intron_boundary i_start="40808" i_stop="40898" i_length="91"/>
          </intron>
          <exon e_serial="3" e_score="0.986">
            <gDNA_exon_boundary e_start="40899" e_stop="40967" e_length="69"/>
          </exon>
          <intron i_serial="3" don_prob="0.989" acc_prob="0.872">
            <gDNA_intron_boundary i_start="40968" i_stop="41107" i_length="140"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="41108" e_stop="41214" e_length="107"/>
          </exon>
          <intron i_serial="4" don_prob="0.919" acc_prob="0.994">
            <gDNA_intron_boundary i_start="41215" i_stop="41806" i_length="592"/>
          </intron>
          <exon e_serial="5" e_score="0.993">
            <gDNA_exon_boundary e_start="41807" e_stop="42485" e_length="679"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="39589" stop="39640"/>
              <exon start="40664" stop="40807"/>
              <exon start="40899" stop="40967"/>
              <exon start="41108" stop="41214"/>
              <exon start="41807" stop="42485"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U577761" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGACTGAACTCACCTGGGTATAAGAAAAAATAAATAAAAAAAATCTTCGAAG : GTTTAAAGATGGCTTTATTCAATAGAATTGGAAATATGCTTAAACAGAGTGTAAGCAGACACACGAATTTGGAATTGTGTGCCACTAGAACCTCACTTTACCAGGCTATAAGAAGCATGTCTTCTTCAAAGCTTTTTGTTGGAG : GTCTCTCATATGGCACTGATGAAACCTCTCTGCGAGAGGCATTCTCCCAACATGGTCAAGTGATTGAAG : CTAGAGTTATTTTTGATCGTGACAGTGGGAGATCCAGAGGGTTTGGTTTTGTTACTTATACATCTGCTGAAGAAGCATCAAGTGCCCTGAGTGCCTTGGATGGCCAG : GATCTCCACGGGAGACGGATAAGGGTGAATTATGCCACAGAAAAGCGTCCTGGAGGATTCGGGCGTGGTTCTGGTGGTGGAGGTGGATTTAGCTATGGTGGGGGAGCTGGAGGTTACTCATATGGGAATTATGGAGGTGGTGGTAACTATGGTAGCAACAACAGTTACCCTGCAGGTGGTGGCAGCTATGGTGGGGATAGTTTTGGGGCTGGATATGGTGGTGGGAGTAGTGGAAGTTACAACGCTGGTGTTTCCGCTAGTAATGACTTCTTGAACAACTCTGAATTTGGTGGGAGCCCTGGGACCTCGCACAATGGTGGTGAAGAACAGCTTAGTGCAGACCAAGGGACTGAATCTGTAGACAATGATTTCACACCAGGTGTAGAAAGGAGCAGCAGCGACGACAATGATGAGCCAAAGGACTACGCCAACTCGAGGAGTTCATAATACGTCCTCATATGCTATTCACCAACTTTGGGTTTGATGAGTACATGTTCACAATACGTGTTGAGTTAAAAGAAAGTATATTCTATTTCCAGCAGGGTTGCTACTGGTTGAATGCTTCATCTAAGTTTAATCAATCTGTAGGATTACACTCTACTCGTTTCATAAATGTTTTAAGTTCATGGAGCTCTCCAAGTACTGATTTTGTGCAATGTACAGTGCTGAATCTTTTGCT</gDNA_template>
            <first_frame> *  L  N  S  P  G  Y  K  K  K  *  I  K  K  I  F  E   : G  L  K  M  A  L  F  N  R  I  G  N  M  L  K  Q  S  V  S  R  H  T  N  L  E  L  C  A  T  R  T  S  L  Y  Q  A  I  R  S  M  S  S  S  K  L  F  V  G   : G  L  S  Y  G  T  D  E  T  S  L  R  E  A  F  S  Q  H  G  Q  V  I  E   : A  R  V  I  F  D  R  D  S  G  R  S  R  G  F  G  F  V  T  Y  T  S  A  E  E  A  S  S  A  L  S  A  L  D  G  Q  :  D  L  H  G  R  R  I  R  V  N  Y  A  T  E  K  R  P  G  G  F  G  R  G  S  G  G  G  G  G  F  S  Y  G  G  G  A  G  G  Y  S  Y  G  N  Y  G  G  G  G  N  Y  G  S  N  N  S  Y  P  A  G  G  G  S  Y  G  G  D  S  F  G  A  G  Y  G  G  G  S  S  G  S  Y  N  A  G  V  S  A  S  N  D  F  L  N  N  S  E  F  G  G  S  P  G  T  S  H  N  G  G  E  E  Q  L  S  A  D  Q  G  T  E  S  V  D  N  D  F  T  P  G  V  E  R  S  S  S  D  D  N  D  E  P  K  D  Y  A  N  S  R  S  S  *  Y  V  L  I  C  Y  S  P  T  L  G  L  M  S  T  C  S  Q  Y  V  L  S  *  K  K  V  Y  S  I  S  S  R  V  A  T  G  *  M  L  H  L  S  L  I  N  L  *  D  Y  T  L  L  V  S  *  M  F  *  V  H  G  A  L  Q  V  L  I  L  C  N  V  Q  C  *  I  F  C  </first_frame>
            <second_frame>  D  *  T  H  L  G  I  R  K  N  K  *  K  K  S  S  K  :  V  *  R  W  L  Y  S  I  E  L  E  I  C  L  N  R  V  *  A  D  T  R  I  W  N  C  V  P  L  E  P  H  F  T  R  L  *  E  A  C  L  L  Q  S  F  L  L  E  :  V  S  H  M  A  L  M  K  P  L  C  E  R  H  S  P  N  M  V  K  *  L  K  :  L  E  L  F  L  I  V  T  V  G  D  P  E  G  L  V  L  L  L  I  H  L  L  K  K  H  Q  V  P  *  V  P  W  M  A  R :   I  S  T  G  D  G  *  G  *  I  M  P  Q  K  S  V  L  E  D  S  G  V  V  L  V  V  E  V  D  L  A  M  V  G  E  L  E  V  T  H  M  G  I  M  E  V  V  V  T  M  V  A  T  T  V  T  L  Q  V  V  A  A  M  V  G  I  V  L  G  L  D  M  V  V  G  V  V  E  V  T  T  L  V  F  P  L  V  M  T  S  *  T  T  L  N  L  V  G  A  L  G  P  R  T  M  V  V  K  N  S  L  V  Q  T  K  G  L  N  L  *  T  M  I  S  H  Q  V  *  K  G  A  A  A  T  T  M  M  S  Q  R  T  T  P  T  R  G  V  H  N  T  S  S  Y  A  I  H  Q  L  W  V  *  *  V  H  V  H  N  T  C  *  V  K  R  K  Y  I  L  F  P  A  G  L  L  L  V  E  C  F  I  *  V  *  S  I  C  R  I  T  L  Y  S  F  H  K  C  F  K  F  M  E  L  S  K  Y  *  F  C  A  M  Y  S  A  E  S  F  A </second_frame>
            <third_frame>   T  E  L  T  W  V  *  E  K  I  N  K  K  N  L  R  R :   F  K  D  G  F  I  Q  *  N  W  K  Y  A  *  T  E  C  K  Q  T  H  E  F  G  I  V  C  H  *  N  L  T  L  P  G  Y  K  K  H  V  F  F  K  A  F  C  W  R :   S  L  I  W  H  *  *  N  L  S  A  R  G  I  L  P  T  W  S  S  D  *  S :   *  S  Y  F  *  S  *  Q  W  E  I  Q  R  V  W  F  C  Y  L  Y  I  C  *  R  S  I  K  C  P  E  C  L  G  W  P   : G  S  P  R  E  T  D  K  G  E  L  C  H  R  K  A  S  W  R  I  R  A  W  F  W  W  W  R  W  I  *  L  W  W  G  S  W  R  L  L  I  W  E  L  W  R  W  W  *  L  W  *  Q  Q  Q  L  P  C  R  W  W  Q  L  W  W  G  *  F  W  G  W  I  W  W  W  E  *  W  K  L  Q  R  W  C  F  R  *  *  *  L  L  E  Q  L  *  I  W  W  E  P  W  D  L  A  Q  W  W  *  R  T  A  *  C  R  P  R  D  *  I  C  R  Q  *  F  H  T  R  C  R  K  E  Q  Q  R  R  Q  *  *  A  K  G  L  R  Q  L  E  E  F  I  I  R  P  H  M  L  F  T  N  F  G  F  D  E  Y  M  F  T  I  R  V  E  L  K  E  S  I  F  Y  F  Q  Q  G  C  Y  W  L  N  A  S  S  K  F  N  Q  S  V  G  L  H  S  T  R  F  I  N  V  L  S  S  W  S  S  P  S  T  D  F  V  Q  C  T  V  L  N  L  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0190N21.3" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="39622" stop="39640"/>
                    <exon start="40664" stop="40807"/>
                    <exon start="40899" stop="40967"/>
                    <exon start="41108" stop="41214"/>
                    <exon start="41807" stop="42253"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>783</number_coding_nucleotides>
                  <number_encoded_amino_acids>261</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IKKIFEGLKMALFNRIGNMLKQSVSRHTNLELCATRTSLYQAIRSMSSSKLFVGGLSYGTDETSLREAFSQHGQVIEARVIFDRDSGRSRGFGFVTYTSAEEASSALSALDGQDLHGRRIRVNYATEKRPGGFGRGSGGGGGFSYGGGAGGYSYGNYGGGGNYGSNNSYPAGGGSYGGDSFGAGYGGGSSGSYNAGVSASNDFLNNSEFGGSPGTSHNGGEEQLSADQGTESVDNDFTPGVERSSSDDNDEPKDYANSRSS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="50298" PGL_stop="42752"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="47045" e_stop="46543"/>
            <exon e_start="46396" e_stop="46279"/>
            <exon e_start="46129" e_stop="45613"/>
            <exon e_start="44454" e_stop="43987"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.888" e_score="0.996"/>
          <exon-intron don_prob="0.793" acc_prob="0.965" e_score="1.000"/>
          <exon-intron don_prob="0.988" acc_prob="0.982" e_score="0.979"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="47045" e_stop="46543" e_length="503"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.888">
            <gDNA_intron_boundary i_start="46542" i_stop="46397" i_length="146"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="46396" e_stop="46279" e_length="118"/>
          </exon>
          <intron i_serial="2" don_prob="0.793" acc_prob="0.965">
            <gDNA_intron_boundary i_start="46278" i_stop="46130" i_length="149"/>
          </intron>
          <exon e_serial="3" e_score="0.979">
            <gDNA_exon_boundary e_start="46129" e_stop="45613" e_length="517"/>
          </exon>
          <intron i_serial="3" don_prob="0.988" acc_prob="0.982">
            <gDNA_intron_boundary i_start="45612" i_stop="44455" i_length="1158"/>
          </intron>
          <exon e_serial="4" e_score="0.998">
            <gDNA_exon_boundary e_start="44454" e_stop="43987" e_length="468"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47045" stop="46543"/>
              <exon start="46396" stop="46279"/>
              <exon start="46129" stop="46051"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U569823" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46098" stop="45613"/>
              <exon start="44454" stop="44101"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U595373" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45717" stop="45613"/>
              <exon start="44454" stop="43987"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U595371" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AATTGGATCCTTTGTTTTTTGTGATTTACTATCCATTTGCCTTATCAATTTCTTTTACCTATATGCTGTGATTTGCTGGCAAATTTAAATACCGGGAAGTTCATTCAGCTGTTACTTCTCTGTTATGGATCAGATATTGGCATCATGTATTCTCTTTATTGATCAGATTATGGTCTGAGTAATTATATGATTGTTTCTTCCAGTAGTTTGGGTGTAGTCCATTCTCTACCCTGCCTGGCTAATTATCTTATTTATCTCTTTTGGCATTATGATGCTTGATGTGCTCCTTTAAACTTTATTTTTATTGATAGAAAGCCAAGAGTTTCTAATGTTCTGAGCTCTCTCTGACATCTCCGTCCATTTGGAGAGATTTTCTTCTGTGCTGGTGGTTGGCTTTTTGTAAGTGCAGGATCAGTATATTAATCACATTATGAATGAAACTGGAGCAACTGTCTTGCTAAGAGGACGTGGTTCGGGATATTCAGATGAAGGACAGGGAGAAG : ATGTTCACCAACCTCTGCATTTACTCATATCAAGCAATAACAGTGCAAGTCTTGAGCGTGCGAAGCTTTTGGCAGAAAATCTTTTGGATACTATTTGTGCAGAGTGTGGTGCTTCTAG : AGTCTCTTCTTGTAAGGTTTATGGAGCTGTTCCGCCTCCACTGCAACCGTTAGCCAGCGTTCAGGTTTCTGGAAGTGAATCAGAAGTCAATAACACACCCACAGCCAATGTAGCTGCACAGATTTTGAGCTCCTCAACTGCAGCAGCAGTTCCCGTGACTGCAGCTGCAGGTGGGACTGGTGTTGTTTCTCAGGGTACAGTACCTCAATCTCTAGGCTCACTAGATCCTGTGCCATCTCAACCTCCCACCAGTTGTTATCCTCATCAATTAGTTACAAGTAGAACAAGCTATATTGGCTATGATGGTATATATCCCCAAGCCACTGCTTTGCAGCAAGTTGCTTTGGCTCTTAGGCAATCTACTTCTCCAGTCACTTCAACAGTTCCTCCAGCAACAACGGGACCAAGCATCACTTCACAGACAAGTACAGGTTCTGAGAAGGACAAGCGCCCTGCACAGAAGCGTAAATTTCAAGAATTGCCGGCTGGTGGAAAAGGCCAAGCAACTGTAAACCAG : GTAATTTCTCTGACCTTGTATGAAGCTAACAGGCTGTGGAACTCTGTTGGACCTTTGTATGTTTCACAGGATTCTGGATACGGAGGAGGCATGGGGTTGCTACGTGCAATTTCAGTGTTATGGTGCCGATGCAAAGATGCCATGCCCTTCTGGTTTAGGCATTTTGTTAAATGTTAATATGCTAATATGAAATGCACATTTTTAATCAACTTTGCTTCAAGTACTAAAAGGGTAATGAGATCGAGCTCACAGTACATTCTGCCTGTGAGGCTTTCAAACTGTTTCAACTTTACTCTAGAAGATAAAATGTTTTCTATTGGTATCTGCAATATATGCATTTTCTAAACATGTTGATCTAAGCTCCTTGTAACAAGTGAGAGAAAAAAAAGTCAAGCTGCATCTTACACGATTGAGTCCAATTTATTCATGTCAACCAATAACTCTTATGATCATGCATTTATTTTGAAC</gDNA_template>
            <first_frame> N  W  I  L  C  F  L  *  F  T  I  H  L  P  Y  Q  F  L  L  P  I  C  C  D  L  L  A  N  L  N  T  G  K  F  I  Q  L  L  L  L  C  Y  G  S  D  I  G  I  M  Y  S  L  Y  *  S  D  Y  G  L  S  N  Y  M  I  V  S  S  S  S  L  G  V  V  H  S  L  P  C  L  A  N  Y  L  I  Y  L  F  W  H  Y  D  A  *  C  A  P  L  N  F  I  F  I  D  R  K  P  R  V  S  N  V  L  S  S  L  *  H  L  R  P  F  G  E  I  F  F  C  A  G  G  W  L  F  V  S  A  G  S  V  Y  *  S  H  Y  E  *  N  W  S  N  C  L  A  K  R  T  W  F  G  I  F  R  *  R  T  G  R  R :   C  S  P  T  S  A  F  T  H  I  K  Q  *  Q  C  K  S  *  A  C  E  A  F  G  R  K  S  F  G  Y  Y  L  C  R  V  W  C  F  *  :  S  L  F  L  *  G  L  W  S  C  S  A  S  T  A  T  V  S  Q  R  S  G  F  W  K  *  I  R  S  Q  *  H  T  H  S  Q  C  S  C  T  D  F  E  L  L  N  C  S  S  S  S  R  D  C  S  C  R  W  D  W  C  C  F  S  G  Y  S  T  S  I  S  R  L  T  R  S  C  A  I  S  T  S  H  Q  L  L  S  S  S  I  S  Y  K  *  N  K  L  Y  W  L  *  W  Y  I  S  P  S  H  C  F  A  A  S  C  F  G  S  *  A  I  Y  F  S  S  H  F  N  S  S  S  S  N  N  G  T  K  H  H  F  T  D  K  Y  R  F  *  E  G  Q  A  P  C  T  E  A  *  I  S  R  I  A  G  W  W  K  R  P  S  N  C  K  P   : G  N  F  S  D  L  V  *  S  *  Q  A  V  E  L  C  W  T  F  V  C  F  T  G  F  W  I  R  R  R  H  G  V  A  T  C  N  F  S  V  M  V  P  M  Q  R  C  H  A  L  L  V  *  A  F  C  *  M  L  I  C  *  Y  E  M  H  I  F  N  Q  L  C  F  K  Y  *  K  G  N  E  I  E  L  T  V  H  S  A  C  E  A  F  K  L  F  Q  L  Y  S  R  R  *  N  V  F  Y  W  Y  L  Q  Y  M  H  F  L  N  M  L  I  *  A  P  C  N  K  *  E  K  K  K  S  S  C  I  L  H  D  *  V  Q  F  I  H  V  N  Q  *  L  L  *  S  C  I  Y  F  E  </first_frame>
            <second_frame>  I  G  S  F  V  F  C  D  L  L  S  I  C  L  I  N  F  F  Y  L  Y  A  V  I  C  W  Q  I  *  I  P  G  S  S  F  S  C  Y  F  S  V  M  D  Q  I  L  A  S  C  I  L  F  I  D  Q  I  M  V  *  V  I  I  *  L  F  L  P  V  V  W  V  *  S  I  L  Y  P  A  W  L  I  I  L  F  I  S  F  G  I  M  M  L  D  V  L  L  *  T  L  F  L  L  I  E  S  Q  E  F  L  M  F  *  A  L  S  D  I  S  V  H  L  E  R  F  S  S  V  L  V  V  G  F  L  *  V  Q  D  Q  Y  I  N  H  I  M  N  E  T  G  A  T  V  L  L  R  G  R  G  S  G  Y  S  D  E  G  Q  G  E   : D  V  H  Q  P  L  H  L  L  I  S  S  N  N  S  A  S  L  E  R  A  K  L  L  A  E  N  L  L  D  T  I  C  A  E  C  G  A  S  R :   V  S  S  C  K  V  Y  G  A  V  P  P  P  L  Q  P  L  A  S  V  Q  V  S  G  S  E  S  E  V  N  N  T  P  T  A  N  V  A  A  Q  I  L  S  S  S  T  A  A  A  V  P  V  T  A  A  A  G  G  T  G  V  V  S  Q  G  T  V  P  Q  S  L  G  S  L  D  P  V  P  S  Q  P  P  T  S  C  Y  P  H  Q  L  V  T  S  R  T  S  Y  I  G  Y  D  G  I  Y  P  Q  A  T  A  L  Q  Q  V  A  L  A  L  R  Q  S  T  S  P  V  T  S  T  V  P  P  A  T  T  G  P  S  I  T  S  Q  T  S  T  G  S  E  K  D  K  R  P  A  Q  K  R  K  F  Q  E  L  P  A  G  G  K  G  Q  A  T  V  N  Q  :  V  I  S  L  T  L  Y  E  A  N  R  L  W  N  S  V  G  P  L  Y  V  S  Q  D  S  G  Y  G  G  G  M  G  L  L  R  A  I  S  V  L  W  C  R  C  K  D  A  M  P  F  W  F  R  H  F  V  K  C  *  Y  A  N  M  K  C  T  F  L  I  N  F  A  S  S  T  K  R  V  M  R  S  S  S  Q  Y  I  L  P  V  R  L  S  N  C  F  N  F  T  L  E  D  K  M  F  S  I  G  I  C  N  I  C  I  F  *  T  C  *  S  K  L  L  V  T  S  E  R  K  K  S  Q  A  A  S  Y  T  I  E  S  N  L  F  M  S  T  N  N  S  Y  D  H  A  F  I  L  N </second_frame>
            <third_frame>   L  D  P  L  F  F  V  I  Y  Y  P  F  A  L  S  I  S  F  T  Y  M  L  *  F  A  G  K  F  K  Y  R  E  V  H  S  A  V  T  S  L  L  W  I  R  Y  W  H  H  V  F  S  L  L  I  R  L  W  S  E  *  L  Y  D  C  F  F  Q  *  F  G  C  S  P  F  S  T  L  P  G  *  L  S  Y  L  S  L  L  A  L  *  C  L  M  C  S  F  K  L  Y  F  Y  *  *  K  A  K  S  F  *  C  S  E  L  S  L  T  S  P  S  I  W  R  D  F  L  L  C  W  W  L  A  F  C  K  C  R  I  S  I  L  I  T  L  *  M  K  L  E  Q  L  S  C  *  E  D  V  V  R  D  I  Q  M  K  D  R  E  K  :  M  F  T  N  L  C  I  Y  S  Y  Q  A  I  T  V  Q  V  L  S  V  R  S  F  W  Q  K  I  F  W  I  L  F  V  Q  S  V  V  L  L   : E  S  L  L  V  R  F  M  E  L  F  R  L  H  C  N  R  *  P  A  F  R  F  L  E  V  N  Q  K  S  I  T  H  P  Q  P  M  *  L  H  R  F  *  A  P  Q  L  Q  Q  Q  F  P  *  L  Q  L  Q  V  G  L  V  L  F  L  R  V  Q  Y  L  N  L  *  A  H  *  I  L  C  H  L  N  L  P  P  V  V  I  L  I  N  *  L  Q  V  E  Q  A  I  L  A  M  M  V  Y  I  P  K  P  L  L  C  S  K  L  L  W  L  L  G  N  L  L  L  Q  S  L  Q  Q  F  L  Q  Q  Q  R  D  Q  A  S  L  H  R  Q  V  Q  V  L  R  R  T  S  A  L  H  R  S  V  N  F  K  N  C  R  L  V  E  K  A  K  Q  L  *  T  R :   *  F  L  *  P  C  M  K  L  T  G  C  G  T  L  L  D  L  C  M  F  H  R  I  L  D  T  E  E  A  W  G  C  Y  V  Q  F  Q  C  Y  G  A  D  A  K  M  P  C  P  S  G  L  G  I  L  L  N  V  N  M  L  I  *  N  A  H  F  *  S  T  L  L  Q  V  L  K  G  *  *  D  R  A  H  S  T  F  C  L  *  G  F  Q  T  V  S  T  L  L  *  K  I  K  C  F  L  L  V  S  A  I  Y  A  F  S  K  H  V  D  L  S  S  L  *  Q  V  R  E  K  K  V  K  L  H  L  T  R  L  S  P  I  Y  S  C  Q  P  I  T  L  M  I  M  H  L  F  *   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0190N21.3" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="46642" stop="46543"/>
                    <exon start="46396" stop="46279"/>
                    <exon start="46129" stop="45613"/>
                    <exon start="44454" stop="44278"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>909</number_coding_nucleotides>
                  <number_encoded_amino_acids>303</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VQDQYINHIMNETGATVLLRGRGSGYSDEGQGEDVHQPLHLLISSNNSASLERAKLLAENLLDTICAECGASRVSSCKVYGAVPPPLQPLASVQVSGSESEVNNTPTANVAAQILSSSTAAAVPVTAAAGGTGVVSQGTVPQSLGSLDPVPSQPPTSCYPHQLVTSRTSYIGYDGIYPQATALQQVALALRQSTSPVTSTVPPATTGPSITSQTSTGSEKDKRPAQKRKFQELPAGGKGQATVNQVISLTLYEANRLWNSVGPLYVSQDSGYGGGMGLLRAISVLWCRCKDAMPFWFRHFVKC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="44799" e_stop="44375"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="44799" e_stop="44375" e_length="425"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44799" stop="44375"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U595372" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GACTATGCTGTGTATATGAATTATGATAGATTCTTCACTTCACCTTCCACTATATAAATGGTATTAATAGAAGGATGAAGTACACCTTGTGTAGCATGATGACTGGCAAAATTGGGATTTATCAGATTCTCTTATTTTTGGGTCTCTTTTAAACTTAGTTTACCATTCATCCTACATCTTAGTTTCTATTAAAATAAGACTTCGTTGTCTCTCATTTTAAATTTTCATCTCATTGCTGTTGTATATGGAGCGTTTGAAATTTCTCAAATTTCTTCCCTTGAGATATTTTTCAGTTATAAAACATATACTAATTTCTGGTCTAACCTTTTCTACTTGATATTCCAGGTAATTTCTCTGACCTTGTATGAAGCTAACAGGCTGTGGAACTCTGTTGGACCTTTGTATGTTTCACAGGATTCTGGATA</gDNA_template>
            <first_frame> D  Y  A  V  Y  M  N  Y  D  R  F  F  T  S  P  S  T  I  *  M  V  L  I  E  G  *  S  T  P  C  V  A  *  *  L  A  K  L  G  F  I  R  F  S  Y  F  W  V  S  F  K  L  S  L  P  F  I  L  H  L  S  F  Y  *  N  K  T  S  L  S  L  I  L  N  F  H  L  I  A  V  V  Y  G  A  F  E  I  S  Q  I  S  S  L  E  I  F  F  S  Y  K  T  Y  T  N  F  W  S  N  L  F  Y  L  I  F  Q  V  I  S  L  T  L  Y  E  A  N  R  L  W  N  S  V  G  P  L  Y  V  S  Q  D  S  G   </first_frame>
            <second_frame>  T  M  L  C  I  *  I  M  I  D  S  S  L  H  L  P  L  Y  K  W  Y  *  *  K  D  E  V  H  L  V  *  H  D  D  W  Q  N  W  D  L  S  D  S  L  I  F  G  S  L  L  N  L  V  Y  H  S  S  Y  I  L  V  S  I  K  I  R  L  R  C  L  S  F  *  I  F  I  S  L  L  L  Y  M  E  R  L  K  F  L  K  F  L  P  L  R  Y  F  S  V  I  K  H  I  L  I  S  G  L  T  F  S  T  *  Y  S  R  *  F  L  *  P  C  M  K  L  T  G  C  G  T  L  L  D  L  C  M  F  H  R  I  L  D  </second_frame>
            <third_frame>   L  C  C  V  Y  E  L  *  *  I  L  H  F  T  F  H  Y  I  N  G  I  N  R  R  M  K  Y  T  L  C  S  M  M  T  G  K  I  G  I  Y  Q  I  L  L  F  L  G  L  F  *  T  *  F  T  I  H  P  T  S  *  F  L  L  K  *  D  F  V  V  S  H  F  K  F  S  S  H  C  C  C  I  W  S  V  *  N  F  S  N  F  F  P  *  D  I  F  Q  L  *  N  I  Y  *  F  L  V  *  P  F  L  L  D  I  P  G  N  F  S  D  L  V  *  S  *  Q  A  V  E  L  C  W  T  F  V  C  F  T  G  F  W  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0190N21.3" strand="-"/>
                <serials PGL_serial="4" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="44607" stop="44377"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>231</number_coding_nucleotides>
                  <number_encoded_amino_acids>77</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NKTSLSLILNFHLIAVVYGAFEISQISSLEIFFSYKTYTNFWSNLFYLIFQVISLTLYEANRLWNSVGPLYVSQDSG</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="50298" e_stop="50086"/>
            <exon e_start="49270" e_stop="49054"/>
            <exon e_start="48636" e_stop="48538"/>
            <exon e_start="48429" e_stop="48395"/>
            <exon e_start="48310" e_stop="48235"/>
            <exon e_start="47434" e_stop="47339"/>
            <exon e_start="47262" e_stop="47176"/>
            <exon e_start="46636" e_stop="46543"/>
            <exon e_start="46396" e_stop="46279"/>
            <exon e_start="46129" e_stop="45613"/>
            <exon e_start="43863" e_stop="43623"/>
            <exon e_start="43223" e_stop="42752"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.963" acc_prob="0.841" e_score="0.995"/>
          <exon-intron don_prob="0.929" acc_prob="0.955" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.961" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.957" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.983" acc_prob="0.592" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.949" e_score="0.989"/>
          <exon-intron don_prob="0.000" acc_prob="0.888" e_score="0.989"/>
          <exon-intron don_prob="0.793" acc_prob="0.965" e_score="1.000"/>
          <exon-intron don_prob="0.988" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.997" e_score="1.000"/>
          <exon-only e_score="0.989"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="50298" e_stop="50086" e_length="213"/>
          </exon>
          <intron i_serial="1" don_prob="0.963" acc_prob="0.841">
            <gDNA_intron_boundary i_start="50085" i_stop="49271" i_length="815"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="49270" e_stop="49054" e_length="217"/>
          </exon>
          <intron i_serial="2" don_prob="0.929" acc_prob="0.955">
            <gDNA_intron_boundary i_start="49053" i_stop="48637" i_length="417"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="48636" e_stop="48538" e_length="99"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.993">
            <gDNA_intron_boundary i_start="48537" i_stop="48430" i_length="108"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="48429" e_stop="48395" e_length="35"/>
          </exon>
          <intron i_serial="4" don_prob="0.961" acc_prob="1.000">
            <gDNA_intron_boundary i_start="48394" i_stop="48311" i_length="84"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="48310" e_stop="48235" e_length="76"/>
          </exon>
          <intron i_serial="5" don_prob="0.957" acc_prob="0.985">
            <gDNA_intron_boundary i_start="48234" i_stop="47435" i_length="800"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="47434" e_stop="47339" e_length="96"/>
          </exon>
          <intron i_serial="6" don_prob="0.983" acc_prob="0.592">
            <gDNA_intron_boundary i_start="47338" i_stop="47263" i_length="76"/>
          </intron>
          <exon e_serial="7" e_score="0.989">
            <gDNA_exon_boundary e_start="47262" e_stop="47176" e_length="87"/>
          </exon>
          <intron i_serial="7" don_prob="0.998" acc_prob="0.949">
            <gDNA_intron_boundary i_start="47175" i_stop="46637" i_length="539"/>
          </intron>
          <exon e_serial="8" e_score="0.989">
            <gDNA_exon_boundary e_start="46636" e_stop="46543" e_length="94"/>
          </exon>
          <intron i_serial="8" don_prob="0.000" acc_prob="0.888">
            <gDNA_intron_boundary i_start="46542" i_stop="46397" i_length="146"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="46396" e_stop="46279" e_length="118"/>
          </exon>
          <intron i_serial="9" don_prob="0.793" acc_prob="0.965">
            <gDNA_intron_boundary i_start="46278" i_stop="46130" i_length="149"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="46129" e_stop="45613" e_length="517"/>
          </exon>
          <intron i_serial="10" don_prob="0.988" acc_prob="0.000">
            <gDNA_intron_boundary i_start="45612" i_stop="43864" i_length="1749"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="43863" e_stop="43623" e_length="241"/>
          </exon>
          <intron i_serial="11" don_prob="0.990" acc_prob="0.997">
            <gDNA_intron_boundary i_start="43622" i_stop="43224" i_length="399"/>
          </intron>
          <exon e_serial="12" e_score="0.989">
            <gDNA_exon_boundary e_start="43223" e_stop="42752" e_length="472"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50298" stop="50086"/>
              <exon start="49270" stop="49054"/>
              <exon start="48636" stop="48538"/>
              <exon start="48429" stop="48395"/>
              <exon start="48310" stop="48235"/>
              <exon start="47434" stop="47339"/>
              <exon start="47262" stop="47176"/>
              <exon start="46636" stop="46543"/>
              <exon start="46396" stop="46279"/>
              <exon start="46129" stop="45613"/>
              <exon start="43863" stop="43623"/>
              <exon start="43223" stop="42752"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U569822" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CATTACGGATTCTGAAAACCACAAATTCTTACAATTTGATGAATCCAAAATCTCAATCTGCCTGAAAATTCAATCCTTCTGCCGCTCCGTTGATTCAGAAGAAGCGTTTCAATTGCACGAACTAGAAATTTCTTCAGCAATGACGGAGGATAATTGCCCTAGAGTTTCATCTTCTGAAACCGTAGACTCCAATTCTTCATCGACGAAGCAAAG : GAAACGGAGAAAGTGGGATCAGCCTGCGGAGACATTCGTTCCAGAAGGGGTAGCGGTATCTGGGATTTTTCCATTGGCAAATACTGGTTCTCTTGCTGGTATCACACTACCTGGCGTGATTCCAGTCTTGGGTGCTGCTTTTACGAATCCTCTTACCACTATTGGTGCTACTACAGTGCAGCAGCTTCCTGTAATTATTGCCCAAAAATCAGTTCAA : CCGAAAATTCAGGATGAGTTGATAGCAAGAGAAATTGTCATTAATGATGCTGATCCGTCTGTTCGCTACAGGCTCACAAAGCGCCAAACACAAGAAGAG : ATTCAGAAGAGCACGGGTGCTGTGGTTATAACTAG : GGGTAAATACAAGCCTCCAAGCGCACCTTCTGATGGTGAAAAACCCCTATACCTTCATATTTCTGCTGGGGCACAT : CTAGAAACAACACTTGAGAGGATCAGAGCAGTTGATCGTGCTGCTGCTGTAGTGGAGGAAATGCTTAAGCAAGGTCCTGTTAACAATGGATTAAAG : GTTAATCATCTGCTGAGTACCTGTGTATACCTGGGCTTTGAGGCTGATCCATCAGCAAATATTACTGTGCGCATTCGTGGACCAAAT : GATCAGTATATTAATCACATTATGAATGAAACTGGAGCAACTGTCTTGCTAAGAGGACGTGGTTCGGGATATTCAGATGAAGGACAGGGAGAAG : ATGTTCACCAACCTCTGCATTTACTCATATCAAGCAATAACAGTGCAAGTCTTGAGCGTGCGAAGCTTTTGGCAGAAAATCTTTTGGATACTATTTGTGCAGAGTGTGGTGCTTCTAG : AGTCTCTTCTTGTAAGGTTTATGGAGCTGTTCCGCCTCCACTGCAACCGTTAGCCAGCGTTCAGGTTTCTGGAAGTGAATCAGAAGTCAATAACACACCCACAGCCAATGTAGCTGCACAGATTTTGAGCTCCTCAACTGCAGCAGCAGTTCCCGTGACTGCAGCTGCAGGTGGGACTGGTGTTGTTTCTCAGGGTACAGTACCTCAATCTCTAGGCTCACTAGATCCTGTGCCATCTCAACCTCCCACCAGTTGTTATCCTCATCAATTAGTTACAAGTAGAACAAGCTATATTGGCTATGATGGTATATATCCCCAAGCCACTGCTTTGCAGCAAGTTGCTTTGGCTCTTAGGCAATCTACTTCTCCAGTCACTTCAACAGTTCCTCCAGCAACAACGGGACCAAGCATCACTTCACAGACAAGTACAGGTTCTGAGAAGGACAAGCGCCCTGCACAGAAGCGTAAATTTCAAGAATTGCCGGCTGGTGGAAAAGGCCAAGCAACTGTAAACCAG : AATCCACTGCAGGCTACGGAGCTTCTAATGCTTCAGGAACGAATTTCAGAGAAAGGTGATACAGACAAAATTGGTATTCCGACTCCCAGAAAGTTGGTTCAGCCCTTATCCAGTTCAATGCTGCCGCCGCCACCTCCTAGAATGATGCCTCCACCGCCGCCGCCACCAAAGTTTCAATCATCCTCACAGAAAGTGCATGATAACAATATGGTTAACAAAGCACCAAGTAAAATTGTACCAG : ATACATTAGTCCAGCTAATGGAATACGGGGATGACGACGACGACGACGATAATGATGAAGCAATTGACGGACCTTTGAAAAGTAGCTCAAGTGCGGTAGCGACTCCAAAGCCATTCTGGGCTGTTTAATAATATGACCACTGCACATCTCTGAAGATTTTGGCAACAGCTGAATGTGCATTATAAGTTGAATGGTTGTTTTCAATTGACCTGGAAGTGGCTGTGAAATATAAAATATGTACCCTTCCCCACCCCAGCAAAAAGATGTGGGGCCACCAAATGGAGGAAAAGAGGAAAGGAGAGTTCTGTAGTATTGTGCCAATCTGATAATATCAGAGTGTAAGTGATGCTCTATGTAAAATGACTCGTAGAAATTCCGCAACCTTGTATTTCCATTCAGAAGTTGTTTGCTGCTGGCTTGTAGTTTCACTCTGAACTCTTTATGAAACAAAGAAATGCCAGCAGTTTAACCT</gDNA_template>
            <first_frame> H  Y  G  F  *  K  P  Q  I  L  T  I  *  *  I  Q  N  L  N  L  P  E  N  S  I  L  L  P  L  R  *  F  R  R  S  V  S  I  A  R  T  R  N  F  F  S  N  D  G  G  *  L  P  *  S  F  I  F  *  N  R  R  L  Q  F  F  I  D  E  A  K  :  E  T  E  K  V  G  S  A  C  G  D  I  R  S  R  R  G  S  G  I  W  D  F  S  I  G  K  Y  W  F  S  C  W  Y  H  T  T  W  R  D  S  S  L  G  C  C  F  Y  E  S  S  Y  H  Y  W  C  Y  Y  S  A  A  A  S  C  N  Y  C  P  K  I  S  S   : T  E  N  S  G  *  V  D  S  K  R  N  C  H  *  *  C  *  S  V  C  S  L  Q  A  H  K  A  P  N  T  R  R   : D  S  E  E  H  G  C  C  G  Y  N  *  :  G  *  I  Q  A  S  K  R  T  F  *  W  *  K  T  P  I  P  S  Y  F  C  W  G  T   : S  R  N  N  T  *  E  D  Q  S  S  *  S  C  C  C  C  S  G  G  N  A  *  A  R  S  C  *  Q  W  I  K   : G  *  S  S  A  E  Y  L  C  I  P  G  L  *  G  *  S  I  S  K  Y  Y  C  A  H  S  W  T  K   : *  S  V  Y  *  S  H  Y  E  *  N  W  S  N  C  L  A  K  R  T  W  F  G  I  F  R  *  R  T  G  R  R :   C  S  P  T  S  A  F  T  H  I  K  Q  *  Q  C  K  S  *  A  C  E  A  F  G  R  K  S  F  G  Y  Y  L  C  R  V  W  C  F  *  :  S  L  F  L  *  G  L  W  S  C  S  A  S  T  A  T  V  S  Q  R  S  G  F  W  K  *  I  R  S  Q  *  H  T  H  S  Q  C  S  C  T  D  F  E  L  L  N  C  S  S  S  S  R  D  C  S  C  R  W  D  W  C  C  F  S  G  Y  S  T  S  I  S  R  L  T  R  S  C  A  I  S  T  S  H  Q  L  L  S  S  S  I  S  Y  K  *  N  K  L  Y  W  L  *  W  Y  I  S  P  S  H  C  F  A  A  S  C  F  G  S  *  A  I  Y  F  S  S  H  F  N  S  S  S  S  N  N  G  T  K  H  H  F  T  D  K  Y  R  F  *  E  G  Q  A  P  C  T  E  A  *  I  S  R  I  A  G  W  W  K  R  P  S  N  C  K  P   : E  S  T  A  G  Y  G  A  S  N  A  S  G  T  N  F  R  E  R  *  Y  R  Q  N  W  Y  S  D  S  Q  K  V  G  S  A  L  I  Q  F  N  A  A  A  A  T  S  *  N  D  A  S  T  A  A  A  T  K  V  S  I  I  L  T  E  S  A  *  *  Q  Y  G  *  Q  S  T  K  *  N  C  T  R :   Y  I  S  P  A  N  G  I  R  G  *  R  R  R  R  R  *  *  *  S  N  *  R  T  F  E  K  *  L  K  C  G  S  D  S  K  A  I  L  G  C  L  I  I  *  P  L  H  I  S  E  D  F  G  N  S  *  M  C  I  I  S  *  M  V  V  F  N  *  P  G  S  G  C  E  I  *  N  M  Y  P  S  P  P  Q  Q  K  D  V  G  P  P  N  G  G  K  E  E  R  R  V  L  *  Y  C  A  N  L  I  I  S  E  C  K  *  C  S  M  *  N  D  S  *  K  F  R  N  L  V  F  P  F  R  S  C  L  L  L  A  C  S  F  T  L  N  S  L  *  N  K  E  M  P  A  V  *  P </first_frame>
            <second_frame>  I  T  D  S  E  N  H  K  F  L  Q  F  D  E  S  K  I  S  I  C  L  K  I  Q  S  F  C  R  S  V  D  S  E  E  A  F  Q  L  H  E  L  E  I  S  S  A  M  T  E  D  N  C  P  R  V  S  S  S  E  T  V  D  S  N  S  S  S  T  K  Q  R :   K  R  R  K  W  D  Q  P  A  E  T  F  V  P  E  G  V  A  V  S  G  I  F  P  L  A  N  T  G  S  L  A  G  I  T  L  P  G  V  I  P  V  L  G  A  A  F  T  N  P  L  T  T  I  G  A  T  T  V  Q  Q  L  P  V  I  I  A  Q  K  S  V  Q  :  P  K  I  Q  D  E  L  I  A  R  E  I  V  I  N  D  A  D  P  S  V  R  Y  R  L  T  K  R  Q  T  Q  E  E  :  I  Q  K  S  T  G  A  V  V  I  T  R :   G  K  Y  K  P  P  S  A  P  S  D  G  E  K  P  L  Y  L  H  I  S  A  G  A  H  :  L  E  T  T  L  E  R  I  R  A  V  D  R  A  A  A  V  V  E  E  M  L  K  Q  G  P  V  N  N  G  L  K  :  V  N  H  L  L  S  T  C  V  Y  L  G  F  E  A  D  P  S  A  N  I  T  V  R  I  R  G  P  N  :  D  Q  Y  I  N  H  I  M  N  E  T  G  A  T  V  L  L  R  G  R  G  S  G  Y  S  D  E  G  Q  G  E   : D  V  H  Q  P  L  H  L  L  I  S  S  N  N  S  A  S  L  E  R  A  K  L  L  A  E  N  L  L  D  T  I  C  A  E  C  G  A  S  R :   V  S  S  C  K  V  Y  G  A  V  P  P  P  L  Q  P  L  A  S  V  Q  V  S  G  S  E  S  E  V  N  N  T  P  T  A  N  V  A  A  Q  I  L  S  S  S  T  A  A  A  V  P  V  T  A  A  A  G  G  T  G  V  V  S  Q  G  T  V  P  Q  S  L  G  S  L  D  P  V  P  S  Q  P  P  T  S  C  Y  P  H  Q  L  V  T  S  R  T  S  Y  I  G  Y  D  G  I  Y  P  Q  A  T  A  L  Q  Q  V  A  L  A  L  R  Q  S  T  S  P  V  T  S  T  V  P  P  A  T  T  G  P  S  I  T  S  Q  T  S  T  G  S  E  K  D  K  R  P  A  Q  K  R  K  F  Q  E  L  P  A  G  G  K  G  Q  A  T  V  N  Q  :  N  P  L  Q  A  T  E  L  L  M  L  Q  E  R  I  S  E  K  G  D  T  D  K  I  G  I  P  T  P  R  K  L  V  Q  P  L  S  S  S  M  L  P  P  P  P  P  R  M  M  P  P  P  P  P  P  P  K  F  Q  S  S  S  Q  K  V  H  D  N  N  M  V  N  K  A  P  S  K  I  V  P   : D  T  L  V  Q  L  M  E  Y  G  D  D  D  D  D  D  D  N  D  E  A  I  D  G  P  L  K  S  S  S  S  A  V  A  T  P  K  P  F  W  A  V  *  *  Y  D  H  C  T  S  L  K  I  L  A  T  A  E  C  A  L  *  V  E  W  L  F  S  I  D  L  E  V  A  V  K  Y  K  I  C  T  L  P  H  P  S  K  K  M  W  G  H  Q  M  E  E  K  R  K  G  E  F  C  S  I  V  P  I  *  *  Y  Q  S  V  S  D  A  L  C  K  M  T  R  R  N  S  A  T  L  Y  F  H  S  E  V  V  C  C  W  L  V  V  S  L  *  T  L  Y  E  T  K  K  C  Q  Q  F  N   </second_frame>
            <third_frame>   L  R  I  L  K  T  T  N  S  Y  N  L  M  N  P  K  S  Q  S  A  *  K  F  N  P  S  A  A  P  L  I  Q  K  K  R  F  N  C  T  N  *  K  F  L  Q  Q  *  R  R  I  I  A  L  E  F  H  L  L  K  P  *  T  P  I  L  H  R  R  S  K   : G  N  G  E  S  G  I  S  L  R  R  H  S  F  Q  K  G  *  R  Y  L  G  F  F  H  W  Q  I  L  V  L  L  L  V  S  H  Y  L  A  *  F  Q  S  W  V  L  L  L  R  I  L  L  P  L  L  V  L  L  Q  C  S  S  F  L  *  L  L  P  K  N  Q  F  N :   R  K  F  R  M  S  *  *  Q  E  K  L  S  L  M  M  L  I  R  L  F  A  T  G  S  Q  S  A  K  H  K  K  R :   F  R  R  A  R  V  L  W  L  *  L   : G  V  N  T  S  L  Q  A  H  L  L  M  V  K  N  P  Y  T  F  I  F  L  L  G  H  I :   *  K  Q  H  L  R  G  S  E  Q  L  I  V  L  L  L  *  W  R  K  C  L  S  K  V  L  L  T  M  D  *  R :   L  I  I  C  *  V  P  V  Y  T  W  A  L  R  L  I  H  Q  Q  I  L  L  C  A  F  V  D  Q  M :   I  S  I  L  I  T  L  *  M  K  L  E  Q  L  S  C  *  E  D  V  V  R  D  I  Q  M  K  D  R  E  K  :  M  F  T  N  L  C  I  Y  S  Y  Q  A  I  T  V  Q  V  L  S  V  R  S  F  W  Q  K  I  F  W  I  L  F  V  Q  S  V  V  L  L   : E  S  L  L  V  R  F  M  E  L  F  R  L  H  C  N  R  *  P  A  F  R  F  L  E  V  N  Q  K  S  I  T  H  P  Q  P  M  *  L  H  R  F  *  A  P  Q  L  Q  Q  Q  F  P  *  L  Q  L  Q  V  G  L  V  L  F  L  R  V  Q  Y  L  N  L  *  A  H  *  I  L  C  H  L  N  L  P  P  V  V  I  L  I  N  *  L  Q  V  E  Q  A  I  L  A  M  M  V  Y  I  P  K  P  L  L  C  S  K  L  L  W  L  L  G  N  L  L  L  Q  S  L  Q  Q  F  L  Q  Q  Q  R  D  Q  A  S  L  H  R  Q  V  Q  V  L  R  R  T  S  A  L  H  R  S  V  N  F  K  N  C  R  L  V  E  K  A  K  Q  L  *  T  R :   I  H  C  R  L  R  S  F  *  C  F  R  N  E  F  Q  R  K  V  I  Q  T  K  L  V  F  R  L  P  E  S  W  F  S  P  Y  P  V  Q  C  C  R  R  H  L  L  E  *  C  L  H  R  R  R  H  Q  S  F  N  H  P  H  R  K  C  M  I  T  I  W  L  T  K  H  Q  V  K  L  Y  Q  :  I  H  *  S  S  *  W  N  T  G  M  T  T  T  T  T  I  M  M  K  Q  L  T  D  L  *  K  V  A  Q  V  R  *  R  L  Q  S  H  S  G  L  F  N  N  M  T  T  A  H  L  *  R  F  W  Q  Q  L  N  V  H  Y  K  L  N  G  C  F  Q  L  T  W  K  W  L  *  N  I  K  Y  V  P  F  P  T  P  A  K  R  C  G  A  T  K  W  R  K  R  G  K  E  S  S  V  V  L  C  Q  S  D  N  I  R  V  *  V  M  L  Y  V  K  *  L  V  E  I  P  Q  P  C  I  S  I  Q  K  L  F  A  A  G  L  *  F  H  S  E  L  F  M  K  Q  R  N  A  S  S  L  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0190N21.3" strand="-"/>
                <serials PGL_serial="4" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="50297" stop="50086"/>
                    <exon start="49270" stop="49054"/>
                    <exon start="48636" stop="48538"/>
                    <exon start="48429" stop="48395"/>
                    <exon start="48310" stop="48235"/>
                    <exon start="47434" stop="47339"/>
                    <exon start="47262" stop="47176"/>
                    <exon start="46636" stop="46543"/>
                    <exon start="46396" stop="46279"/>
                    <exon start="46129" stop="45613"/>
                    <exon start="43863" stop="43623"/>
                    <exon start="43223" stop="43096"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1917</number_coding_nucleotides>
                  <number_encoded_amino_acids>639</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ITDSENHKFLQFDESKISICLKIQSFCRSVDSEEAFQLHELEISSAMTEDNCPRVSSSETVDSNSSSTKQRKRRKWDQPAETFVPEGVAVSGIFPLANTGSLAGITLPGVIPVLGAAFTNPLTTIGATTVQQLPVIIAQKSVQPKIQDELIAREIVINDADPSVRYRLTKRQTQEEIQKSTGAVVITRGKYKPPSAPSDGEKPLYLHISAGAHLETTLERIRAVDRAAAVVEEMLKQGPVNNGLKVNHLLSTCVYLGFEADPSANITVRIRGPNDQYINHIMNETGATVLLRGRGSGYSDEGQGEDVHQPLHLLISSNNSASLERAKLLAENLLDTICAECGASRVSSCKVYGAVPPPLQPLASVQVSGSESEVNNTPTANVAAQILSSSTAAAVPVTAAAGGTGVVSQGTVPQSLGSLDPVPSQPPTSCYPHQLVTSRTSYIGYDGIYPQATALQQVALALRQSTSPVTSTVPPATTGPSITSQTSTGSEKDKRPAQKRKFQELPAGGKGQATVNQNPLQATELLMLQERISEKGDTDKIGIPTPRKLVQPLSSSMLPPPPPRMMPPPPPPPKFQSSSQKVHDNNMVNKAPSKIVPDTLVQLMEYGDDDDDDDNDEAIDGPLKSSSSAVATPKPFWAV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="55059" PGL_stop="57368"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="55059" e_stop="55268"/>
            <exon e_start="56309" e_stop="56460"/>
            <exon e_start="56541" e_stop="56598"/>
            <exon e_start="56704" e_stop="57368"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.990" e_score="0.995"/>
          <exon-intron don_prob="0.714" acc_prob="0.213" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.988" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="55059" e_stop="55268" e_length="210"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.990">
            <gDNA_intron_boundary i_start="55269" i_stop="56308" i_length="1040"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="56309" e_stop="56460" e_length="152"/>
          </exon>
          <intron i_serial="2" don_prob="0.714" acc_prob="0.213">
            <gDNA_intron_boundary i_start="56461" i_stop="56540" i_length="80"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="56541" e_stop="56598" e_length="58"/>
          </exon>
          <intron i_serial="3" don_prob="0.994" acc_prob="0.988">
            <gDNA_intron_boundary i_start="56599" i_stop="56703" i_length="105"/>
          </intron>
          <exon e_serial="4" e_score="0.998">
            <gDNA_exon_boundary e_start="56704" e_stop="57368" e_length="665"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55059" stop="55268"/>
              <exon start="56309" stop="56460"/>
              <exon start="56541" stop="56598"/>
              <exon start="56704" stop="57368"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U570918" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAAAAGTTAAAAAAAGTAGAACAGCTTTGTGCTCCGCCAGAGTGCTGTACATTCAGCTCCCCTTCAATATTCATCCATTTTAGTTCGCTTTCAGCCTTTTGAGAGATCTGAAAATTCAATGAGGGCTCTTCGTTTGAGCGATTTCGAGTATCAAACATCTTCTGATTGAGTTCATATCGAATTATGAAGCTTTGAATTTGATTACCTAGT : GAAGATATGGGCACAAGCACATTACCAGATGCATTATTTGGATCTGTTCAACAGCACACTATTATTTCTTCACGCAGACACCATGACCCTATTCGATTTGTTGCTGTTAAGTCGCATTCCACGATCTATAGAAGGCGTTCTGTTGGGAAAAG : AGTTCTGTTCGCGGATGCCTGCCTCTGCAAACCAAGACATGTTGTTTTCTCGAGCATG : GATTATTCAACTGAAGCTCTCACAGATGATGAGGATGGTGATTCATTAGGGAGGAGTAAAGTTGTAGGGATTGATGATGATGAACTGTTGGCAACTAGGAAATCTCTATCTGATGTTCAAGCCAGAAATAAAACCATTGAAAAGGAAAGAGATCAATTGCTTGAAAAGGTAGCTCGGTCTGAGGCTAAACAGAAGGAGTATTTGTCCACCGTAATGCATGATAAGGATTTGGCCATATCAGAACTAGAGTCAGCCAAAGCTCTATTTAACCGTAAGCTAGAAGAGTCTTTGGAGGAGAAATTTAACTTGGAATCTAAGTTGGTCCTGGCAAAACAAGATGCTGTTGAACTTGCGGTTCAAGTTGAGAAGCTTGCTGAGATTGCTTTTCAGCAGGCAACTTCTCACATACTCGAAGATGCACAATTACGAGTTTCAGCTGCTGAAGCTTCTGCAGCAGAGGCTGCTTTTCAAATTGAAGAACAAATAAGGACTGCCTCTGACGGGGCCATAACCTATGTTCTACAACAGTCTAAAGATGCCATAGAAAAGGCTTTAGCTGTAGCTGAGTCATCTGGAGAGCATACAACAAATGCCATGGCTGCATTTGTAGATAATATGGATCGGGATGATGAGATCGTAACAGTCCAGTCCCAGAATATCAAGTT</gDNA_template>
            <first_frame> E  K  L  K  K  V  E  Q  L  C  A  P  P  E  C  C  T  F  S  S  P  S  I  F  I  H  F  S  S  L  S  A  F  *  E  I  *  K  F  N  E  G  S  S  F  E  R  F  R  V  S  N  I  F  *  L  S  S  Y  R  I  M  K  L  *  I  *  L  P  S  :  E  D  M  G  T  S  T  L  P  D  A  L  F  G  S  V  Q  Q  H  T  I  I  S  S  R  R  H  H  D  P  I  R  F  V  A  V  K  S  H  S  T  I  Y  R  R  R  S  V  G  K  R :   V  L  F  A  D  A  C  L  C  K  P  R  H  V  V  F  S  S  M  :  D  Y  S  T  E  A  L  T  D  D  E  D  G  D  S  L  G  R  S  K  V  V  G  I  D  D  D  E  L  L  A  T  R  K  S  L  S  D  V  Q  A  R  N  K  T  I  E  K  E  R  D  Q  L  L  E  K  V  A  R  S  E  A  K  Q  K  E  Y  L  S  T  V  M  H  D  K  D  L  A  I  S  E  L  E  S  A  K  A  L  F  N  R  K  L  E  E  S  L  E  E  K  F  N  L  E  S  K  L  V  L  A  K  Q  D  A  V  E  L  A  V  Q  V  E  K  L  A  E  I  A  F  Q  Q  A  T  S  H  I  L  E  D  A  Q  L  R  V  S  A  A  E  A  S  A  A  E  A  A  F  Q  I  E  E  Q  I  R  T  A  S  D  G  A  I  T  Y  V  L  Q  Q  S  K  D  A  I  E  K  A  L  A  V  A  E  S  S  G  E  H  T  T  N  A  M  A  A  F  V  D  N  M  D  R  D  D  E  I  V  T  V  Q  S  Q  N  I  K   </first_frame>
            <second_frame>  K  S  *  K  K  *  N  S  F  V  L  R  Q  S  A  V  H  S  A  P  L  Q  Y  S  S  I  L  V  R  F  Q  P  F  E  R  S  E  N  S  M  R  A  L  R  L  S  D  F  E  Y  Q  T  S  S  D  *  V  H  I  E  L  *  S  F  E  F  D  Y  L  V :   K  I  W  A  Q  A  H  Y  Q  M  H  Y  L  D  L  F  N  S  T  L  L  F  L  H  A  D  T  M  T  L  F  D  L  L  L  L  S  R  I  P  R  S  I  E  G  V  L  L  G  K   : E  F  C  S  R  M  P  A  S  A  N  Q  D  M  L  F  S  R  A  W :   I  I  Q  L  K  L  S  Q  M  M  R  M  V  I  H  *  G  G  V  K  L  *  G  L  M  M  M  N  C  W  Q  L  G  N  L  Y  L  M  F  K  P  E  I  K  P  L  K  R  K  E  I  N  C  L  K  R  *  L  G  L  R  L  N  R  R  S  I  C  P  P  *  C  M  I  R  I  W  P  Y  Q  N  *  S  Q  P  K  L  Y  L  T  V  S  *  K  S  L  W  R  R  N  L  T  W  N  L  S  W  S  W  Q  N  K  M  L  L  N  L  R  F  K  L  R  S  L  L  R  L  L  F  S  R  Q  L  L  T  Y  S  K  M  H  N  Y  E  F  Q  L  L  K  L  L  Q  Q  R  L  L  F  K  L  K  N  K  *  G  L  P  L  T  G  P  *  P  M  F  Y  N  S  L  K  M  P  *  K  R  L  *  L  *  L  S  H  L  E  S  I  Q  Q  M  P  W  L  H  L  *  I  I  W  I  G  M  M  R  S  *  Q  S  S  P  R  I  S  S  </second_frame>
            <third_frame>   K  V  K  K  S  R  T  A  L  C  S  A  R  V  L  Y  I  Q  L  P  F  N  I  H  P  F  *  F  A  F  S  L  L  R  D  L  K  I  Q  *  G  L  F  V  *  A  I  S  S  I  K  H  L  L  I  E  F  I  S  N  Y  E  A  L  N  L  I  T  *   : *  R  Y  G  H  K  H  I  T  R  C  I  I  W  I  C  S  T  A  H  Y  Y  F  F  T  Q  T  P  *  P  Y  S  I  C  C  C  *  V  A  F  H  D  L  *  K  A  F  C  W  E  K  :  S  S  V  R  G  C  L  P  L  Q  T  K  T  C  C  F  L  E  H   : G  L  F  N  *  S  S  H  R  *  *  G  W  *  F  I  R  E  E  *  S  C  R  D  *  *  *  *  T  V  G  N  *  E  I  S  I  *  C  S  S  Q  K  *  N  H  *  K  G  K  R  S  I  A  *  K  G  S  S  V  *  G  *  T  E  G  V  F  V  H  R  N  A  *  *  G  F  G  H  I  R  T  R  V  S  Q  S  S  I  *  P  *  A  R  R  V  F  G  G  E  I  *  L  G  I  *  V  G  P  G  K  T  R  C  C  *  T  C  G  S  S  *  E  A  C  *  D  C  F  S  A  G  N  F  S  H  T  R  R  C  T  I  T  S  F  S  C  *  S  F  C  S  R  G  C  F  S  N  *  R  T  N  K  D  C  L  *  R  G  H  N  L  C  S  T  T  V  *  R  C  H  R  K  G  F  S  C  S  *  V  I  W  R  A  Y  N  K  C  H  G  C  I  C  R  *  Y  G  S  G  *  *  D  R  N  S  P  V  P  E  Y  Q  V </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0190N21.3" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="55260" stop="55268"/>
                    <exon start="56309" stop="56460"/>
                    <exon start="56541" stop="56598"/>
                    <exon start="56704" stop="57366"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>882</number_coding_nucleotides>
                  <number_encoded_amino_acids>294</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LPSEDMGTSTLPDALFGSVQQHTIISSRRHHDPIRFVAVKSHSTIYRRRSVGKRVLFADACLCKPRHVVFSSMDYSTEALTDDEDGDSLGRSKVVGIDDDELLATRKSLSDVQARNKTIEKERDQLLEKVARSEAKQKEYLSTVMHDKDLAISELESAKALFNRKLEESLEEKFNLESKLVLAKQDAVELAVQVEKLAEIAFQQATSHILEDAQLRVSAAEASAAEAAFQIEEQIRTASDGAITYVLQQSKDAIEKALAVAESSGEHTTNAMAAFVDNMDRDDEIVTVQSQNIK</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="57468" PGL_stop="58740"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="57468" e_stop="58221"/>
            <exon e_start="58308" e_stop="58740"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.947" e_score="0.999"/>
          <exon-only e_score="0.958"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="57468" e_stop="58221" e_length="754"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.947">
            <gDNA_intron_boundary i_start="58222" i_stop="58307" i_length="86"/>
          </intron>
          <exon e_serial="2" e_score="0.958">
            <gDNA_exon_boundary e_start="58308" e_stop="58740" e_length="433"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57468" stop="58221"/>
              <exon start="58308" stop="58740"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U562688" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGTATACGAACTCCGTGCAAATGATGTTGAGAAGTTATTGCTTGAGTTTCAGGAATCAAGCAGAAAAGCAGCTCTACAACAGGAGGAGGAAATAAAATCATCATTAGAGAAAATGAGAAAAGATGCTACGGAGAAAAAGAAGGCAGCTTCAAAGGCATTTAAGCTTGAGCTAGAGAGGATGAAGACTGCCATTGAAGCAGCAAAAGAAACAGCACGTTCACAAGATGAGGCATACACGCGAAGATGTGAAGCACTGCAGAGATCTTTAAAAGCAGCTGAAGCTGCTTCAAAAACATGGAGACAAAGAGCAGAAATGGCTGAGGATTTGTTACTAAGGAGAAGTTGTTCAGAAGAAGGGGATGAGGAAGCTATTTATCGAGTTAATGGTGGAAGAATAGATTTTCTTATGGATGATGATTCACTGAAATGGAAACTTTTAACTGATGGCCCTCGCAGGCCAACACCTGAGTGGATGGCACGGAGGATACGCTCTATCCGTCCCAGGTTTCCACCTAGGAAAACTCATGTATCTGAGGTCATGACATCAGGATTTAAAACTTTGGACTTGCCTAAACCCGATGAAGTATGGTCTATTGCCCAAGAAAAGCTAAAGGAAGGAGATGCGCTCGTTGAGCATGTGATTGAGAAAGAAGTTATTGAAAAGAAGAGGAAGGCTTTGGAACGTGCTCTTCAACGGAAGACAGTTAAATGGCAAAGAACTCCAGAAGAAACAAAATTAGGTGCAGCTATTCAT : AATCAGGGACGGGTACTGGACGAGAGATTGTGGTCAGTAATACCAGCTTTCATTTTGATCTTTTTTCTGTATAAGATAAAAGTAATTTTATTAACAATAGCAGTACAAGGGGGTACTGCAAAGTACAAAAAGAAGCTGGACAGTATACAAATATTATACAATAGCGAACTCAAACAAGTCCAGAAACTCAGTTGTGGTGAATACAGGATTTCCACTATGCCAATACTCTCTGTAAACACTTGTATCTTACATAGGAAATCATCTCTTTTTTCCCTAGAAACATCTTCTATTTCTCTCTCGTGATACTTCCCAAATGATGTATAAAGTTATCAATTTCCATATCTATTATCTTAAAATAAAATCCTTTGAGAATATTTTACTGTCTTGGAAAGTTATATGGAACCACGTTTATTCTTTGCAAAAAAACTTAAAC</gDNA_template>
            <first_frame> S  I  R  T  P  C  K  *  C  *  E  V  I  A  *  V  S  G  I  K  Q  K  S  S  S  T  T  G  G  G  N  K  I  I  I  R  E  N  E  K  R  C  Y  G  E  K  E  G  S  F  K  G  I  *  A  *  A  R  E  D  E  D  C  H  *  S  S  K  R  N  S  T  F  T  R  *  G  I  H  A  K  M  *  S  T  A  E  I  F  K  S  S  *  S  C  F  K  N  M  E  T  K  S  R  N  G  *  G  F  V  T  K  E  K  L  F  R  R  R  G  *  G  S  Y  L  S  S  *  W  W  K  N  R  F  S  Y  G  *  *  F  T  E  M  E  T  F  N  *  W  P  S  Q  A  N  T  *  V  D  G  T  E  D  T  L  Y  P  S  Q  V  S  T  *  E  N  S  C  I  *  G  H  D  I  R  I  *  N  F  G  L  A  *  T  R  *  S  M  V  Y  C  P  R  K  A  K  G  R  R  C  A  R  *  A  C  D  *  E  R  S  Y  *  K  E  E  E  G  F  G  T  C  S  S  T  E  D  S  *  M  A  K  N  S  R  R  N  K  I  R  C  S  Y  S   : *  S  G  T  G  T  G  R  E  I  V  V  S  N  T  S  F  H  F  D  L  F  S  V  *  D  K  S  N  F  I  N  N  S  S  T  R  G  Y  C  K  V  Q  K  E  A  G  Q  Y  T  N  I  I  Q  *  R  T  Q  T  S  P  E  T  Q  L  W  *  I  Q  D  F  H  Y  A  N  T  L  C  K  H  L  Y  L  T  *  E  I  I  S  F  F  P  R  N  I  F  Y  F  S  L  V  I  L  P  K  *  C  I  K  L  S  I  S  I  S  I  I  L  K  *  N  P  L  R  I  F  Y  C  L  G  K  L  Y  G  T  T  F  I  L  C  K  K  T  *   </first_frame>
            <second_frame>  V  Y  E  L  R  A  N  D  V  E  K  L  L  L  E  F  Q  E  S  S  R  K  A  A  L  Q  Q  E  E  E  I  K  S  S  L  E  K  M  R  K  D  A  T  E  K  K  K  A  A  S  K  A  F  K  L  E  L  E  R  M  K  T  A  I  E  A  A  K  E  T  A  R  S  Q  D  E  A  Y  T  R  R  C  E  A  L  Q  R  S  L  K  A  A  E  A  A  S  K  T  W  R  Q  R  A  E  M  A  E  D  L  L  L  R  R  S  C  S  E  E  G  D  E  E  A  I  Y  R  V  N  G  G  R  I  D  F  L  M  D  D  D  S  L  K  W  K  L  L  T  D  G  P  R  R  P  T  P  E  W  M  A  R  R  I  R  S  I  R  P  R  F  P  P  R  K  T  H  V  S  E  V  M  T  S  G  F  K  T  L  D  L  P  K  P  D  E  V  W  S  I  A  Q  E  K  L  K  E  G  D  A  L  V  E  H  V  I  E  K  E  V  I  E  K  K  R  K  A  L  E  R  A  L  Q  R  K  T  V  K  W  Q  R  T  P  E  E  T  K  L  G  A  A  I  H  :  N  Q  G  R  V  L  D  E  R  L  W  S  V  I  P  A  F  I  L  I  F  F  L  Y  K  I  K  V  I  L  L  T  I  A  V  Q  G  G  T  A  K  Y  K  K  K  L  D  S  I  Q  I  L  Y  N  S  E  L  K  Q  V  Q  K  L  S  C  G  E  Y  R  I  S  T  M  P  I  L  S  V  N  T  C  I  L  H  R  K  S  S  L  F  S  L  E  T  S  S  I  S  L  S  *  Y  F  P  N  D  V  *  S  Y  Q  F  P  Y  L  L  S  *  N  K  I  L  *  E  Y  F  T  V  L  E  S  Y  M  E  P  R  L  F  F  A  K  K  L  K  </second_frame>
            <third_frame>   Y  T  N  S  V  Q  M  M  L  R  S  Y  C  L  S  F  R  N  Q  A  E  K  Q  L  Y  N  R  R  R  K  *  N  H  H  *  R  K  *  E  K  M  L  R  R  K  R  R  Q  L  Q  R  H  L  S  L  S  *  R  G  *  R  L  P  L  K  Q  Q  K  K  Q  H  V  H  K  M  R  H  T  R  E  D  V  K  H  C  R  D  L  *  K  Q  L  K  L  L  Q  K  H  G  D  K  E  Q  K  W  L  R  I  C  Y  *  G  E  V  V  Q  K  K  G  M  R  K  L  F  I  E  L  M  V  E  E  *  I  F  L  W  M  M  I  H  *  N  G  N  F  *  L  M  A  L  A  G  Q  H  L  S  G  W  H  G  G  Y  A  L  S  V  P  G  F  H  L  G  K  L  M  Y  L  R  S  *  H  Q  D  L  K  L  W  T  C  L  N  P  M  K  Y  G  L  L  P  K  K  S  *  R  K  E  M  R  S  L  S  M  *  L  R  K  K  L  L  K  R  R  G  R  L  W  N  V  L  F  N  G  R  Q  L  N  G  K  E  L  Q  K  K  Q  N  *  V  Q  L  F  I :   I  R  D  G  Y  W  T  R  D  C  G  Q  *  Y  Q  L  S  F  *  S  F  F  C  I  R  *  K  *  F  Y  *  Q  *  Q  Y  K  G  V  L  Q  S  T  K  R  S  W  T  V  Y  K  Y  Y  T  I  A  N  S  N  K  S  R  N  S  V  V  V  N  T  G  F  P  L  C  Q  Y  S  L  *  T  L  V  S  Y  I  G  N  H  L  F  F  P  *  K  H  L  L  F  L  S  R  D  T  S  Q  M  M  Y  K  V  I  N  F  H  I  Y  Y  L  K  I  K  S  F  E  N  I  L  L  S  W  K  V  I  W  N  H  V  Y  S  L  Q  K  N  L  N </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0190N21.3" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="57469" stop="58221"/>
                    <exon start="58308" stop="58610"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1053</number_coding_nucleotides>
                  <number_encoded_amino_acids>351</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VYELRANDVEKLLLEFQESSRKAALQQEEEIKSSLEKMRKDATEKKKAASKAFKLELERMKTAIEAAKETARSQDEAYTRRCEALQRSLKAAEAASKTWRQRAEMAEDLLLRRSCSEEGDEEAIYRVNGGRIDFLMDDDSLKWKLLTDGPRRPTPEWMARRIRSIRPRFPPRKTHVSEVMTSGFKTLDLPKPDEVWSIAQEKLKEGDALVEHVIEKEVIEKKRKALERALQRKTVKWQRTPEETKLGAAIHNQGRVLDERLWSVIPAFILIFFLYKIKVILLTIAVQGGTAKYKKKLDSIQILYNSELKQVQKLSCGEYRISTMPILSVNTCILHRKSSLFSLETSSISLS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="59784" PGL_stop="68814"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="59784" e_stop="59839"/>
            <exon e_start="60216" e_stop="60260"/>
            <exon e_start="61238" e_stop="61343"/>
            <exon e_start="62740" e_stop="62866"/>
            <exon e_start="63562" e_stop="63677"/>
            <exon e_start="64029" e_stop="64105"/>
            <exon e_start="64383" e_stop="64517"/>
            <exon e_start="67378" e_stop="67446"/>
            <exon e_start="68251" e_stop="68309"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.961" acc_prob="0.963" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.541" e_score="1.000"/>
          <exon-intron don_prob="0.965" acc_prob="0.965" e_score="1.000"/>
          <exon-intron don_prob="0.257" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.973" acc_prob="0.964" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.902" e_score="1.000"/>
          <exon-intron don_prob="0.760" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.575" acc_prob="0.851" e_score="1.000"/>
          <exon-only e_score="0.966"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="59784" e_stop="59839" e_length="56"/>
          </exon>
          <intron i_serial="1" don_prob="0.961" acc_prob="0.963">
            <gDNA_intron_boundary i_start="59840" i_stop="60215" i_length="376"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="60216" e_stop="60260" e_length="45"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.541">
            <gDNA_intron_boundary i_start="60261" i_stop="61237" i_length="977"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="61238" e_stop="61343" e_length="106"/>
          </exon>
          <intron i_serial="3" don_prob="0.965" acc_prob="0.965">
            <gDNA_intron_boundary i_start="61344" i_stop="62739" i_length="1396"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="62740" e_stop="62866" e_length="127"/>
          </exon>
          <intron i_serial="4" don_prob="0.257" acc_prob="0.987">
            <gDNA_intron_boundary i_start="62867" i_stop="63561" i_length="695"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="63562" e_stop="63677" e_length="116"/>
          </exon>
          <intron i_serial="5" don_prob="0.973" acc_prob="0.964">
            <gDNA_intron_boundary i_start="63678" i_stop="64028" i_length="351"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="64029" e_stop="64105" e_length="77"/>
          </exon>
          <intron i_serial="6" don_prob="1.000" acc_prob="0.902">
            <gDNA_intron_boundary i_start="64106" i_stop="64382" i_length="277"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="64383" e_stop="64517" e_length="135"/>
          </exon>
          <intron i_serial="7" don_prob="0.760" acc_prob="0.998">
            <gDNA_intron_boundary i_start="64518" i_stop="67377" i_length="2860"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="67378" e_stop="67446" e_length="69"/>
          </exon>
          <intron i_serial="8" don_prob="0.575" acc_prob="0.851">
            <gDNA_intron_boundary i_start="67447" i_stop="68250" i_length="804"/>
          </intron>
          <exon e_serial="9" e_score="0.966">
            <gDNA_exon_boundary e_start="68251" e_stop="68309" e_length="59"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59784" stop="59839"/>
              <exon start="60216" stop="60260"/>
              <exon start="61238" stop="61343"/>
              <exon start="62740" stop="62866"/>
              <exon start="63562" stop="63677"/>
              <exon start="64029" stop="64105"/>
              <exon start="64383" stop="64517"/>
              <exon start="67378" stop="67446"/>
              <exon start="68251" stop="68309"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U584475" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTTCGTTGGAAGAGCTTAAAGGCTGTATAGAAGAGATGCATAACCAAGATCTTCTG : GCCTTAGGAGATGTCGTTTTGAACCATCGATGTGCTCACAAACAG : AGTCCGAATGGTGTTTGGAACATTTTTGGAGGCAAGCTTGCATGGGGACCTGAAGCAATTGTGTGTGATGACCCAAATTTTCAAGGCCGTGGAAATCCTTCAAGTG : GTGATATATTTCATGCCGCACCAAATATTGATCATTCCCAGGAATTTGTACGACAAGATATAAAAAAGTGGCTAAATTGGCTCCGAAATGATGTTGGTTTTGATGGGTGGCGCCTTGACTTTGTTAG : GGGCTTCTCAGGAGCATATGTGAAAGAATATATAGAAGCATCAAATCCAGCATTTTCTATTGGCGAGTATTGGGATAGTCTCGCTTATGAAGGTGGAAATTTGTGTTACAACCAAG : ATGCCCATCGCCAACGCATAATTAACTGGATCAATGCTACTGGTGGGAGCTCTTCAGCATTCGATGTCACAACAAAG : GGTATACTGCATTCTGCTTTGCATAACCAATATTGGAGGTTAATTGATCCTCAAGGCAAGCCAACCGGAGTGATGGGATGGTGGCCCTCACGTGCTGTCACATTTTTGGAGAATCATGATACTGGATCCACACAG : GGCCACTGGCCATTTCCTCGGGACAAGCTTACTCAAGGATATGCATATATTTTAACCCACCCTGGAACG : CCTGTAATATTTTACGATCATTTCTATGAATTTGGAATCCGTGATGTCATAAATGAGTT</gDNA_template>
            <first_frame> V  R  W  K  S  L  K  A  V  *  K  R  C  I  T  K  I  F  W :   P  *  E  M  S  F  *  T  I  D  V  L  T  N  R :   V  R  M  V  F  G  T  F  L  E  A  S  L  H  G  D  L  K  Q  L  C  V  M  T  Q  I  F  K  A  V  E  I  L  Q  V  :  V  I  Y  F  M  P  H  Q  I  L  I  I  P  R  N  L  Y  D  K  I  *  K  S  G  *  I  G  S  E  M  M  L  V  L  M  G  G  A  L  T  L  L   : G  A  S  Q  E  H  M  *  K  N  I  *  K  H  Q  I  Q  H  F  L  L  A  S  I  G  I  V  S  L  M  K  V  E  I  C  V  T  T  K  :  M  P  I  A  N  A  *  L  T  G  S  M  L  L  V  G  A  L  Q  H  S  M  S  Q  Q  R :   V  Y  C  I  L  L  C  I  T  N  I  G  G  *  L  I  L  K  A  S  Q  P  E  *  W  D  G  G  P  H  V  L  S  H  F  W  R  I  M  I  L  D  P  H  R :   A  T  G  H  F  L  G  T  S  L  L  K  D  M  H  I  F  *  P  T  L  E  R :   L  *  Y  F  T  I  I  S  M  N  L  E  S  V  M  S  *  M  S  </first_frame>
            <second_frame>  F  V  G  R  A  *  R  L  Y  R  R  D  A  *  P  R  S  S   : G  L  R  R  C  R  F  E  P  S  M  C  S  Q  T   : E  S  E  W  C  L  E  H  F  W  R  Q  A  C  M  G  T  *  S  N  C  V  *  *  P  K  F  S  R  P  W  K  S  F  K  W :   *  Y  I  S  C  R  T  K  Y  *  S  F  P  G  I  C  T  T  R  Y  K  K  V  A  K  L  A  P  K  *  C  W  F  *  W  V  A  P  *  L  C  *  :  G  L  L  R  S  I  C  E  R  I  Y  R  S  I  K  S  S  I  F  Y  W  R  V  L  G  *  S  R  L  *  R  W  K  F  V  L  Q  P  R :   C  P  S  P  T  H  N  *  L  D  Q  C  Y  W  W  E  L  F  S  I  R  C  H  N  K   : G  Y  T  A  F  C  F  A  *  P  I  L  E  V  N  *  S  S  R  Q  A  N  R  S  D  G  M  V  A  L  T  C  C  H  I  F  G  E  S  *  Y  W  I  H  T   : G  P  L  A  I  S  S  G  Q  A  Y  S  R  I  C  I  Y  F  N  P  P  W  N   : A  C  N  I  L  R  S  F  L  *  I  W  N  P  *  C  H  K  *  V </second_frame>
            <third_frame>   S  L  E  E  L  K  G  C  I  E  E  M  H  N  Q  D  L  L  :  A  L  G  D  V  V  L  N  H  R  C  A  H  K  Q  :  S  P  N  G  V  W  N  I  F  G  G  K  L  A  W  G  P  E  A  I  V  C  D  D  P  N  F  Q  G  R  G  N  P  S  S   : G  D  I  F  H  A  A  P  N  I  D  H  S  Q  E  F  V  R  Q  D  I  K  K  W  L  N  W  L  R  N  D  V  G  F  D  G  W  R  L  D  F  V  R :   G  F  S  G  A  Y  V  K  E  Y  I  E  A  S  N  P  A  F  S  I  G  E  Y  W  D  S  L  A  Y  E  G  G  N  L  C  Y  N  Q   : D  A  H  R  Q  R  I  I  N  W  I  N  A  T  G  G  S  S  S  A  F  D  V  T  T  K  :  G  I  L  H  S  A  L  H  N  Q  Y  W  R  L  I  D  P  Q  G  K  P  T  G  V  M  G  W  W  P  S  R  A  V  T  F  L  E  N  H  D  T  G  S  T  Q  :  G  H  W  P  F  P  R  D  K  L  T  Q  G  Y  A  Y  I  L  T  H  P  G  T  :  P  V  I  F  Y  D  H  F  Y  E  F  G  I  R  D  V  I  N  E   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0190N21.3" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="59786" stop="59839"/>
                    <exon start="60216" stop="60260"/>
                    <exon start="61238" stop="61343"/>
                    <exon start="62740" stop="62866"/>
                    <exon start="63562" stop="63677"/>
                    <exon start="64029" stop="64105"/>
                    <exon start="64383" stop="64517"/>
                    <exon start="67378" stop="67446"/>
                    <exon start="68251" stop="68307"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>786</number_coding_nucleotides>
                  <number_encoded_amino_acids>262</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SLEELKGCIEEMHNQDLLALGDVVLNHRCAHKQSPNGVWNIFGGKLAWGPEAIVCDDPNFQGRGNPSSGDIFHAAPNIDHSQEFVRQDIKKWLNWLRNDVGFDGWRLDFVRGFSGAYVKEYIEASNPAFSIGEYWDSLAYEGGNLCYNQDAHRQRIINWINATGGSSSAFDVTTKGILHSALHNQYWRLIDPQGKPTGVMGWWPSRAVTFLENHDTGSTQGHWPFPRDKLTQGYAYILTHPGTPVIFYDHFYEFGIRDVINE</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="60227" e_stop="60260"/>
            <exon e_start="61238" e_stop="61343"/>
            <exon e_start="62740" e_stop="62866"/>
            <exon e_start="63562" e_stop="63575"/>
            <exon e_start="64078" e_stop="64105"/>
            <exon e_start="64383" e_stop="64517"/>
            <exon e_start="67378" e_stop="67446"/>
            <exon e_start="68251" e_stop="68814"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.541" e_score="0.941"/>
          <exon-intron don_prob="0.965" acc_prob="0.965" e_score="1.000"/>
          <exon-intron don_prob="0.257" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.902" e_score="1.000"/>
          <exon-intron don_prob="0.760" acc_prob="0.998" e_score="0.978"/>
          <exon-intron don_prob="0.575" acc_prob="0.851" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.941">
            <gDNA_exon_boundary e_start="60227" e_stop="60260" e_length="34"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.541">
            <gDNA_intron_boundary i_start="60261" i_stop="61237" i_length="977"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="61238" e_stop="61343" e_length="106"/>
          </exon>
          <intron i_serial="2" don_prob="0.965" acc_prob="0.965">
            <gDNA_intron_boundary i_start="61344" i_stop="62739" i_length="1396"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="62740" e_stop="62866" e_length="127"/>
          </exon>
          <intron i_serial="3" don_prob="0.257" acc_prob="0.987">
            <gDNA_intron_boundary i_start="62867" i_stop="63561" i_length="695"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="63562" e_stop="63575" e_length="14"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="63576" i_stop="64077" i_length="502"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="64078" e_stop="64105" e_length="28"/>
          </exon>
          <intron i_serial="5" don_prob="1.000" acc_prob="0.902">
            <gDNA_intron_boundary i_start="64106" i_stop="64382" i_length="277"/>
          </intron>
          <exon e_serial="6" e_score="0.978">
            <gDNA_exon_boundary e_start="64383" e_stop="64517" e_length="135"/>
          </exon>
          <intron i_serial="6" don_prob="0.760" acc_prob="0.998">
            <gDNA_intron_boundary i_start="64518" i_stop="67377" i_length="2860"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="67378" e_stop="67446" e_length="69"/>
          </exon>
          <intron i_serial="7" don_prob="0.575" acc_prob="0.851">
            <gDNA_intron_boundary i_start="67447" i_stop="68250" i_length="804"/>
          </intron>
          <exon e_serial="8" e_score="0.998">
            <gDNA_exon_boundary e_start="68251" e_stop="68814" e_length="564"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60227" stop="60260"/>
              <exon start="61238" stop="61343"/>
              <exon start="62740" stop="62866"/>
              <exon start="63562" stop="63575"/>
              <exon start="64078" stop="64105"/>
              <exon start="64383" stop="64517"/>
              <exon start="67378" stop="67446"/>
              <exon start="68251" stop="68814"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U584474" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGTCGTTTTGAACCATCGATGTGCTCACAAACAG : AGTCCGAATGGTGTTTGGAACATTTTTGGAGGCAAGCTTGCATGGGGACCTGAAGCAATTGTGTGTGATGACCCAAATTTTCAAGGCCGTGGAAATCCTTCAAGTG : GTGATATATTTCATGCCGCACCAAATATTGATCATTCCCAGGAATTTGTACGACAAGATATAAAAAAGTGGCTAAATTGGCTCCGAAATGATGTTGGTTTTGATGGGTGGCGCCTTGACTTTGTTAG : GGGCTTCTCAGGAG : CTCTTCAGCATTCGATGTCACAACAAAG : GGTATACTGCATTCTGCTTTGCATAACCAATATTGGAGGTTAATTGATCCTCAAGGCAAGCCAACCGGAGTGATGGGATGGTGGCCCTCACGTGCTGTCACATTTTTGGAGAATCATGATACTGGATCCACACAG : GGCCACTGGCCATTTCCTCGGGACAAGCTTACTCAAGGATATGCATATATTTTAACCCACCCTGGAACG : CCTGTAATATTTTACGATCATTTCTATGAATTTGGAATCCGTGATGTCATAAATGAGTTAATTGAGGCACGTAGACGAGCTGGAATCCATTGTCGTAGCCCGTTAAAGATATATCATGCAAACGGTGATGGTTACGTTGCACAGATTGGAGATACTCTTGTGATGAAACTTGGTCATTTGGACTGGAATCCTTCCAAAGAAGTTCATTTGGATGGTACCTGGCAAAAGTTTGTCGATAAAGGACCAGAATATCAAATATGGCTCAGGCAATAATACTACATATATTATTCTGGACTTGCATTGTTCTTATTGGTATTCTGTCTATATATATGCTTTCATGTTGTAACTATAATACATCATACCTCACATCAGAGATTTTGAATTCCTGCATCAGTAAATGAAAAGAATAATAAAAAAGAACTGATGTTGGGGTGGGCTTTTCATTTGACAATGGCTATTTATGATGTTATTGGTTTGTATTCGTGCATTATTATATCATTTGTTATTTTGTTGCATAAACAATCTATACATTAATATCATTAACTAATAAAGCTGTGTTTTATC</gDNA_template>
            <first_frame> C  R  F  E  P  S  M  C  S  Q  T   : E  S  E  W  C  L  E  H  F  W  R  Q  A  C  M  G  T  *  S  N  C  V  *  *  P  K  F  S  R  P  W  K  S  F  K  W :   *  Y  I  S  C  R  T  K  Y  *  S  F  P  G  I  C  T  T  R  Y  K  K  V  A  K  L  A  P  K  *  C  W  F  *  W  V  A  P  *  L  C  *  :  G  L  L  R  S :   S  S  A  F  D  V  T  T  K  :  G  I  L  H  S  A  L  H  N  Q  Y  W  R  L  I  D  P  Q  G  K  P  T  G  V  M  G  W  W  P  S  R  A  V  T  F  L  E  N  H  D  T  G  S  T  Q  :  G  H  W  P  F  P  R  D  K  L  T  Q  G  Y  A  Y  I  L  T  H  P  G  T  :  P  V  I  F  Y  D  H  F  Y  E  F  G  I  R  D  V  I  N  E  L  I  E  A  R  R  R  A  G  I  H  C  R  S  P  L  K  I  Y  H  A  N  G  D  G  Y  V  A  Q  I  G  D  T  L  V  M  K  L  G  H  L  D  W  N  P  S  K  E  V  H  L  D  G  T  W  Q  K  F  V  D  K  G  P  E  Y  Q  I  W  L  R  Q  *  Y  Y  I  Y  Y  S  G  L  A  L  F  L  L  V  F  C  L  Y  I  C  F  H  V  V  T  I  I  H  H  T  S  H  Q  R  F  *  I  P  A  S  V  N  E  K  N  N  K  K  E  L  M  L  G  W  A  F  H  L  T  M  A  I  Y  D  V  I  G  L  Y  S  C  I  I  I  S  F  V  I  L  L  H  K  Q  S  I  H  *  Y  H  *  L  I  K  L  C  F  I </first_frame>
            <second_frame>  V  V  L  N  H  R  C  A  H  K  Q  :  S  P  N  G  V  W  N  I  F  G  G  K  L  A  W  G  P  E  A  I  V  C  D  D  P  N  F  Q  G  R  G  N  P  S  S   : G  D  I  F  H  A  A  P  N  I  D  H  S  Q  E  F  V  R  Q  D  I  K  K  W  L  N  W  L  R  N  D  V  G  F  D  G  W  R  L  D  F  V  R :   G  F  S  G   : A  L  Q  H  S  M  S  Q  Q  R :   V  Y  C  I  L  L  C  I  T  N  I  G  G  *  L  I  L  K  A  S  Q  P  E  *  W  D  G  G  P  H  V  L  S  H  F  W  R  I  M  I  L  D  P  H  R :   A  T  G  H  F  L  G  T  S  L  L  K  D  M  H  I  F  *  P  T  L  E  R :   L  *  Y  F  T  I  I  S  M  N  L  E  S  V  M  S  *  M  S  *  L  R  H  V  D  E  L  E  S  I  V  V  A  R  *  R  Y  I  M  Q  T  V  M  V  T  L  H  R  L  E  I  L  L  *  *  N  L  V  I  W  T  G  I  L  P  K  K  F  I  W  M  V  P  G  K  S  L  S  I  K  D  Q  N  I  K  Y  G  S  G  N  N  T  T  Y  I  I  L  D  L  H  C  S  Y  W  Y  S  V  Y  I  Y  A  F  M  L  *  L  *  Y  I  I  P  H  I  R  D  F  E  F  L  H  Q  *  M  K  R  I  I  K  K  N  *  C  W  G  G  L  F  I  *  Q  W  L  F  M  M  L  L  V  C  I  R  A  L  L  Y  H  L  L  F  C  C  I  N  N  L  Y  I  N  I  I  N  *  *  S  C  V  L   </second_frame>
            <third_frame>   S  F  *  T  I  D  V  L  T  N  R :   V  R  M  V  F  G  T  F  L  E  A  S  L  H  G  D  L  K  Q  L  C  V  M  T  Q  I  F  K  A  V  E  I  L  Q  V  :  V  I  Y  F  M  P  H  Q  I  L  I  I  P  R  N  L  Y  D  K  I  *  K  S  G  *  I  G  S  E  M  M  L  V  L  M  G  G  A  L  T  L  L   : G  A  S  Q  E  :  L  F  S  I  R  C  H  N  K   : G  Y  T  A  F  C  F  A  *  P  I  L  E  V  N  *  S  S  R  Q  A  N  R  S  D  G  M  V  A  L  T  C  C  H  I  F  G  E  S  *  Y  W  I  H  T   : G  P  L  A  I  S  S  G  Q  A  Y  S  R  I  C  I  Y  F  N  P  P  W  N   : A  C  N  I  L  R  S  F  L  *  I  W  N  P  *  C  H  K  *  V  N  *  G  T  *  T  S  W  N  P  L  S  *  P  V  K  D  I  S  C  K  R  *  W  L  R  C  T  D  W  R  Y  S  C  D  E  T  W  S  F  G  L  E  S  F  Q  R  S  S  F  G  W  Y  L  A  K  V  C  R  *  R  T  R  I  S  N  M  A  Q  A  I  I  L  H  I  L  F  W  T  C  I  V  L  I  G  I  L  S  I  Y  M  L  S  C  C  N  Y  N  T  S  Y  L  T  S  E  I  L  N  S  C  I  S  K  *  K  E  *  *  K  R  T  D  V  G  V  G  F  S  F  D  N  G  Y  L  *  C  Y  W  F  V  F  V  H  Y  Y  I  I  C  Y  F  V  A  *  T  I  Y  T  L  I  S  L  T  N  K  A  V  F  Y  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0190N21.3" strand="+"/>
                <serials PGL_serial="7" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="63562" stop="63575"/>
                    <exon start="64078" stop="64105"/>
                    <exon start="64383" stop="64517"/>
                    <exon start="67378" stop="67446"/>
                    <exon start="68251" stop="68523"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>516</number_coding_nucleotides>
                  <number_encoded_amino_acids>172</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GLLRSSSAFDVTTKGILHSALHNQYWRLIDPQGKPTGVMGWWPSRAVTFLENHDTGSTQGHWPFPRDKLTQGYAYILTHPGTPVIFYDHFYEFGIRDVINELIEARRRAGIHCRSPLKIYHANGDGYVAQIGDTLVMKLGHLDWNPSKEVHLDGTWQKFVDKGPEYQIWLRQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="70382" PGL_stop="71522"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="70382" e_stop="71522"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.952"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.952">
            <gDNA_exon_boundary e_start="70382" e_stop="71522" e_length="1141"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70382" stop="71522"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U584993" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGCCAATCATGAACACATCAGATTTACTTTGGACAAGCATGGGGAATTCAACAATGCAAAAAATCATTTTCAACATGTTGGTTCACAACAATAAATCTGTGAAATCAGCAGATTGGCTTATTTGCAACTCAACATATGATCTTGAACCAGGAGCCTTCAAACTAGCACCAGAGATAGTGCCTATAGGTCCACTTTTTTCAAACAACTCACTCGAATCAAACGCGTTGTCACTTGAAGCAGAAGCCCTTATATCTTCTAGAGAATCTCCTAATTCACTAGCCGGATCGTTCTGGCCCGAGGACTCAACTTGTCTAGACTGGCTTGATCAACAACCATTATGCTCAGTTGTGTATGTAGCCTTTGGGAGCTTCACAATATTCAATGAAACTCAGTTTCAAGAATTGGCATTAGGGCTTGAACTATCAAACAAACCATTCTTATGGGTTGTGAGAACTACTACTCTAGATACTAAAAGTGACATTTTCTTGAAAAAATTTGAAGAAAAAATAGGGAGGCAAAAGGGGAAAATAGTGAGTTGGGCACCACAACAAAAGGTGTTGAGTCATTCTAGTATAGGTTGTTTTGTTAGTCACTGTGGTTGGAATTCGACGATAGAAGCAATGAGTAACGGGGTTCCAATCTTGTGTTGGCCTTATTTTGCTGACCAATTTATGAACCAAAGTTATGTTTGTGATATATGGAAAGTTGGATTAGGACTAAAGAAAGGGGATAATGGGATTATTAGTTGTGGAGAAATTAAGGTTAAAGTGGAACAATTGTTAGGGAATGATGTATTCAAGAAAAGAGCTATGCAAATCAAGGAAATGAATATGAACTCAGTGAAAGAAGGGGGAAAGTCTCACCAAAATTTGATAAATTTTATTGAATGGATTAAATCATCATAGGAAATTGAAGGAAGATTTGTGTGTTTTTCTGCTTAAATTCATGTATTTTTTAATGTGTTGTAAGTGTGGGTTTGTTACCAAGTGTGTTATGTTTTATGTTTGTTTGTTTTTTTAAATGTAATTTGTTTCTCAGTTTGTAAACTCATTTGTCCAAGATGGTGTCAGAATCAACAATGTTAAAAGCACCCATCTTGGACCACATGGCAATAAAAAGGTAAAAAATTTTACTCTCTTGA</gDNA_template>
            <first_frame> C  Q  S  *  T  H  Q  I  Y  F  G  Q  A  W  G  I  Q  Q  C  K  K  S  F  S  T  C  W  F  T  T  I  N  L  *  N  Q  Q  I  G  L  F  A  T  Q  H  M  I  L  N  Q  E  P  S  N  *  H  Q  R  *  C  L  *  V  H  F  F  Q  T  T  H  S  N  Q  T  R  C  H  L  K  Q  K  P  L  Y  L  L  E  N  L  L  I  H  *  P  D  R  S  G  P  R  T  Q  L  V  *  T  G  L  I  N  N  H  Y  A  Q  L  C  M  *  P  L  G  A  S  Q  Y  S  M  K  L  S  F  K  N  W  H  *  G  L  N  Y  Q  T  N  H  S  Y  G  L  *  E  L  L  L  *  I  L  K  V  T  F  S  *  K  N  L  K  K  K  *  G  G  K  R  G  K  *  *  V  G  H  H  N  K  R  C  *  V  I  L  V  *  V  V  L  L  V  T  V  V  G  I  R  R  *  K  Q  *  V  T  G  F  Q  S  C  V  G  L  I  L  L  T  N  L  *  T  K  V  M  F  V  I  Y  G  K  L  D  *  D  *  R  K  G  I  M  G  L  L  V  V  E  K  L  R  L  K  W  N  N  C  *  G  M  M  Y  S  R  K  E  L  C  K  S  R  K  *  I  *  T  Q  *  K  K  G  E  S  L  T  K  I  *  *  I  L  L  N  G  L  N  H  H  R  K  L  K  E  D  L  C  V  F  L  L  K  F  M  Y  F  L  M  C  C  K  C  G  F  V  T  K  C  V  M  F  Y  V  C  L  F  F  *  M  *  F  V  S  Q  F  V  N  S  F  V  Q  D  G  V  R  I  N  N  V  K  S  T  H  L  G  P  H  G  N  K  K  V  K  N  F  T  L  L  </first_frame>
            <second_frame>  A  N  H  E  H  I  R  F  T  L  D  K  H  G  E  F  N  N  A  K  N  H  F  Q  H  V  G  S  Q  Q  *  I  C  E  I  S  R  L  A  Y  L  Q  L  N  I  *  S  *  T  R  S  L  Q  T  S  T  R  D  S  A  Y  R  S  T  F  F  K  Q  L  T  R  I  K  R  V  V  T  *  S  R  S  P  Y  I  F  *  R  I  S  *  F  T  S  R  I  V  L  A  R  G  L  N  L  S  R  L  A  *  S  T  T  I  M  L  S  C  V  C  S  L  W  E  L  H  N  I  Q  *  N  S  V  S  R  I  G  I  R  A  *  T  I  K  Q  T  I  L  M  G  C  E  N  Y  Y  S  R  Y  *  K  *  H  F  L  E  K  I  *  R  K  N  R  E  A  K  G  E  N  S  E  L  G  T  T  T  K  G  V  E  S  F  *  Y  R  L  F  C  *  S  L  W  L  E  F  D  D  R  S  N  E  *  R  G  S  N  L  V  L  A  L  F  C  *  P  I  Y  E  P  K  L  C  L  *  Y  M  E  S  W  I  R  T  K  E  R  G  *  W  D  Y  *  L  W  R  N  *  G  *  S  G  T  I  V  R  E  *  C  I  Q  E  K  S  Y  A  N  Q  G  N  E  Y  E  L  S  E  R  R  G  K  V  S  P  K  F  D  K  F  Y  *  M  D  *  I  I  I  G  N  *  R  K  I  C  V  F  F  C  L  N  S  C  I  F  *  C  V  V  S  V  G  L  L  P  S  V  L  C  F  M  F  V  C  F  F  K  C  N  L  F  L  S  L  *  T  H  L  S  K  M  V  S  E  S  T  M  L  K  A  P  I  L  D  H  M  A  I  K  R  *  K  I  L  L  S  * </second_frame>
            <third_frame>   P  I  M  N  T  S  D  L  L  W  T  S  M  G  N  S  T  M  Q  K  I  I  F  N  M  L  V  H  N  N  K  S  V  K  S  A  D  W  L  I  C  N  S  T  Y  D  L  E  P  G  A  F  K  L  A  P  E  I  V  P  I  G  P  L  F  S  N  N  S  L  E  S  N  A  L  S  L  E  A  E  A  L  I  S  S  R  E  S  P  N  S  L  A  G  S  F  W  P  E  D  S  T  C  L  D  W  L  D  Q  Q  P  L  C  S  V  V  Y  V  A  F  G  S  F  T  I  F  N  E  T  Q  F  Q  E  L  A  L  G  L  E  L  S  N  K  P  F  L  W  V  V  R  T  T  T  L  D  T  K  S  D  I  F  L  K  K  F  E  E  K  I  G  R  Q  K  G  K  I  V  S  W  A  P  Q  Q  K  V  L  S  H  S  S  I  G  C  F  V  S  H  C  G  W  N  S  T  I  E  A  M  S  N  G  V  P  I  L  C  W  P  Y  F  A  D  Q  F  M  N  Q  S  Y  V  C  D  I  W  K  V  G  L  G  L  K  K  G  D  N  G  I  I  S  C  G  E  I  K  V  K  V  E  Q  L  L  G  N  D  V  F  K  K  R  A  M  Q  I  K  E  M  N  M  N  S  V  K  E  G  G  K  S  H  Q  N  L  I  N  F  I  E  W  I  K  S  S  *  E  I  E  G  R  F  V  C  F  S  A  *  I  H  V  F  F  N  V  L  *  V  W  V  C  Y  Q  V  C  Y  V  L  C  L  F  V  F  L  N  V  I  C  F  S  V  C  K  L  I  C  P  R  W  C  Q  N  Q  Q  C  *  K  H  P  S  W  T  T  W  Q  *  K  G  K  K  F  Y  S  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0190N21.3" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="70384" stop="71286"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>900</number_coding_nucleotides>
                  <number_encoded_amino_acids>300</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PIMNTSDLLWTSMGNSTMQKIIFNMLVHNNKSVKSADWLICNSTYDLEPGAFKLAPEIVPIGPLFSNNSLESNALSLEAEALISSRESPNSLAGSFWPEDSTCLDWLDQQPLCSVVYVAFGSFTIFNETQFQELALGLELSNKPFLWVVRTTTLDTKSDIFLKKFEEKIGRQKGKIVSWAPQQKVLSHSSIGCFVSHCGWNSTIEAMSNGVPILCWPYFADQFMNQSYVCDIWKVGLGLKKGDNGIISCGEIKVKVEQLLGNDVFKKRAMQIKEMNMNSVKEGGKSHQNLINFIEWIKSS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="76551" PGL_stop="76106"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="76551" e_stop="76106"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="76551" e_stop="76106" e_length="446"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76551" stop="76106"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U602653" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATGGGTTCACAGCCAAAAAAATCGAGTAGCTTGCGGCTAAGGAGATCGAGAAGAAATTCTTCCGTGGAAAAACGGTCGAAAAATGGAGTAGTTAACAACAGTAGCAATGCCGCCGGCGATGATAATTCGATTTCAATTTCGGAAAAATTGGAAGCTCTGAAGCAACTTCTCCCAGTCAACAATGGCGAACTAAAAGCAGATCAGTTATTTGAAGAAACAGCTGATTATATTGTTCTTCTCAGAACTCAAATCTTCGTTTTACAGAAACTGCTCGATTTTTGTGACGATGCATCTGGTCAGTCCCAACATATTAATGCTGTATAGTTAGTAGTAATTATTTCCTAATCGAATTTTTATTCTTAGTAGTTAGGTTCTCAATTGAAGGTCAGTAGTTACTAGTAATTTATAGTGACAAAAATCTGAAATACATTCTAATTTTTTTTTTT</gDNA_template>
            <first_frame> M  G  S  Q  P  K  K  S  S  S  L  R  L  R  R  S  R  R  N  S  S  V  E  K  R  S  K  N  G  V  V  N  N  S  S  N  A  A  G  D  D  N  S  I  S  I  S  E  K  L  E  A  L  K  Q  L  L  P  V  N  N  G  E  L  K  A  D  Q  L  F  E  E  T  A  D  Y  I  V  L  L  R  T  Q  I  F  V  L  Q  K  L  L  D  F  C  D  D  A  S  G  Q  S  Q  H  I  N  A  V  *  L  V  V  I  I  S  *  S  N  F  Y  S  *  *  L  G  S  Q  L  K  V  S  S  Y  *  *  F  I  V  T  K  I  *  N  T  F  *  F  F  F   </first_frame>
            <second_frame>  W  V  H  S  Q  K  N  R  V  A  C  G  *  G  D  R  E  E  I  L  P  W  K  N  G  R  K  M  E  *  L  T  T  V  A  M  P  P  A  M  I  I  R  F  Q  F  R  K  N  W  K  L  *  S  N  F  S  Q  S  T  M  A  N  *  K  Q  I  S  Y  L  K  K  Q  L  I  I  L  F  F  S  E  L  K  S  S  F  Y  R  N  C  S  I  F  V  T  M  H  L  V  S  P  N  I  L  M  L  Y  S  *  *  *  L  F  P  N  R  I  F  I  L  S  S  *  V  L  N  *  R  S  V  V  T  S  N  L  *  *  Q  K  S  E  I  H  S  N  F  F  F  </second_frame>
            <third_frame>   G  F  T  A  K  K  I  E  *  L  A  A  K  E  I  E  K  K  F  F  R  G  K  T  V  E  K  W  S  S  *  Q  Q  *  Q  C  R  R  R  *  *  F  D  F  N  F  G  K  I  G  S  S  E  A  T  S  P  S  Q  Q  W  R  T  K  S  R  S  V  I  *  R  N  S  *  L  Y  C  S  S  Q  N  S  N  L  R  F  T  E  T  A  R  F  L  *  R  C  I  W  S  V  P  T  Y  *  C  C  I  V  S  S  N  Y  F  L  I  E  F  L  F  L  V  V  R  F  S  I  E  G  Q  *  L  L  V  I  Y  S  D  K  N  L  K  Y  I  L  I  F  F  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0190N21.3" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="76551" stop="76228"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>321</number_coding_nucleotides>
                  <number_encoded_amino_acids>107</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MGSQPKKSSSLRLRRSRRNSSVEKRSKNGVVNNSSNAAGDDNSISISEKLEALKQLLPVNNGELKADQLFEETADYIVLLRTQIFVLQKLLDFCDDASGQSQHINAV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="-" PGL_start="99540" PGL_stop="98163"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="99540" e_stop="98563"/>
            <exon e_start="98485" e_stop="98163"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="1.000" e_score="0.964"/>
          <exon-only e_score="0.910"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.964">
            <gDNA_exon_boundary e_start="99540" e_stop="98563" e_length="978"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="1.000">
            <gDNA_intron_boundary i_start="98562" i_stop="98486" i_length="77"/>
          </intron>
          <exon e_serial="2" e_score="0.910">
            <gDNA_exon_boundary e_start="98485" e_stop="98163" e_length="323"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99540" stop="98934"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U580906" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98974" stop="98563"/>
              <exon start="98485" stop="98163"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U590183" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCAATTTTATCAATCGAGAAGAAAATAATTTTTGAAATTAACACAATCATGTCTTACGGTGAAAGTGAGTATGGTGGAAGTGGAATTGGATCCGGACAGGGAAAACCCAAAAAGTCACATGGATCTGGATATGGACGAAACGACGATGATGAGCCCCAATCTGAATATGGATCTGGTTACGGGTCAAAAAGTGCTACTCATGACTCTGATGATCAGTACGGGTCAGGTGGATATGGGAGCAAAACCGGATCCGGTGGGCATGGAAGGAAAAGTGAATACGGGGATAAGAGTTCGGAATATGGATCTGGTTATGGAAATGAATCGGGTGGATATGGGAGTAAAACCACATCCACCGGGTATGGAGATGATTCGGGTGGGTATGGGGGTAAAACCACATCCACCGGATATGGAGATGATTCGAATGGGTATGGGAGTAAAACCACATCCACCGGGTATGGAAATGATTCGGGTGGATATGGGAGTAAAACCACATCCACCGGGTATGGAGACGATTCGGGTGGGTATGGGAGTAAAACCACATCCACCGGGTATGGAGATGAATCGGGTGGGTATGGGAGTAAAACCACATCCACTGGATATGGGAATGAATCGGGTGGGTATGGAAGTAAAACAACCTCCACCGGGTATGGAAATGAATCGGGTGGGTATGGGAGTAAAACCACATCTACCGGGTATGGAGATGAATCGGGTGGGTATGGGAGTAAAACCACATCTACCGGGTACGGAGATGAATCGGGTGGATATGGGAGTAAAACCAAATCCACCGGTCATGGAAGAAAGAGTGGTGGTGATGATGACGACGATGATGAGGGGAAAAAATCAGCATACGGATCTAGTGGGTATGGGAGTTCAACAGTTGAGAGGCCTAGTTATGGTAGGTCCGAGGAAGATGACTACAAGAAGTCTAGCTATGGGAAGGGCGGTGACGATGATGAAGGCTATGGTCGCAAGAAATAT : GGTGATTCTGACTCTGACTCCGACAAGGAGAAGAATAAAAATCGTCGCAAAAAGCACTCCGATGATGATTGAGCAGAGTCATGATTTTCTCAAATGTGATCTATTCATGTGTTATTTGAAGTTAGTTAGTAGTAAATAAAATAAAATTGGCATGTCTTCACAGTGTTTTATTGTTACGTTGCAAAAAACACTGATGATTGAGCTGAGATGCTTTTGTCATCCGCTCCAAATTTATGCCATATTATTATTATTAAATGAACTTTTTTATGTGTTTGTCGAGTCATGTTTGTACAGAGAAGGAAATGCCAGTAGTTATTTGTATC</gDNA_template>
            <first_frame> S  I  L  S  I  E  K  K  I  I  F  E  I  N  T  I  M  S  Y  G  E  S  E  Y  G  G  S  G  I  G  S  G  Q  G  K  P  K  K  S  H  G  S  G  Y  G  R  N  D  D  D  E  P  Q  S  E  Y  G  S  G  Y  G  S  K  S  A  T  H  D  S  D  D  Q  Y  G  S  G  G  Y  G  S  K  T  G  S  G  G  H  G  R  K  S  E  Y  G  D  K  S  S  E  Y  G  S  G  Y  G  N  E  S  G  G  Y  G  S  K  T  T  S  T  G  Y  G  D  D  S  G  G  Y  G  G  K  T  T  S  T  G  Y  G  D  D  S  N  G  Y  G  S  K  T  T  S  T  G  Y  G  N  D  S  G  G  Y  G  S  K  T  T  S  T  G  Y  G  D  D  S  G  G  Y  G  S  K  T  T  S  T  G  Y  G  D  E  S  G  G  Y  G  S  K  T  T  S  T  G  Y  G  N  E  S  G  G  Y  G  S  K  T  T  S  T  G  Y  G  N  E  S  G  G  Y  G  S  K  T  T  S  T  G  Y  G  D  E  S  G  G  Y  G  S  K  T  T  S  T  G  Y  G  D  E  S  G  G  Y  G  S  K  T  K  S  T  G  H  G  R  K  S  G  G  D  D  D  D  D  D  E  G  K  K  S  A  Y  G  S  S  G  Y  G  S  S  T  V  E  R  P  S  Y  G  R  S  E  E  D  D  Y  K  K  S  S  Y  G  K  G  G  D  D  D  E  G  Y  G  R  K  K  Y  :  G  D  S  D  S  D  S  D  K  E  K  N  K  N  R  R  K  K  H  S  D  D  D  *  A  E  S  *  F  S  Q  M  *  S  I  H  V  L  F  E  V  S  *  *  *  I  K  *  N  W  H  V  F  T  V  F  Y  C  Y  V  A  K  N  T  D  D  *  A  E  M  L  L  S  S  A  P  N  L  C  H  I  I  I  I  K  *  T  F  L  C  V  C  R  V  M  F  V  Q  R  R  K  C  Q  *  L  F  V   </first_frame>
            <second_frame>  Q  F  Y  Q  S  R  R  K  *  F  L  K  L  T  Q  S  C  L  T  V  K  V  S  M  V  E  V  E  L  D  P  D  R  E  N  P  K  S  H  M  D  L  D  M  D  E  T  T  M  M  S  P  N  L  N  M  D  L  V  T  G  Q  K  V  L  L  M  T  L  M  I  S  T  G  Q  V  D  M  G  A  K  P  D  P  V  G  M  E  G  K  V  N  T  G  I  R  V  R  N  M  D  L  V  M  E  M  N  R  V  D  M  G  V  K  P  H  P  P  G  M  E  M  I  R  V  G  M  G  V  K  P  H  P  P  D  M  E  M  I  R  M  G  M  G  V  K  P  H  P  P  G  M  E  M  I  R  V  D  M  G  V  K  P  H  P  P  G  M  E  T  I  R  V  G  M  G  V  K  P  H  P  P  G  M  E  M  N  R  V  G  M  G  V  K  P  H  P  L  D  M  G  M  N  R  V  G  M  E  V  K  Q  P  P  P  G  M  E  M  N  R  V  G  M  G  V  K  P  H  L  P  G  M  E  M  N  R  V  G  M  G  V  K  P  H  L  P  G  T  E  M  N  R  V  D  M  G  V  K  P  N  P  P  V  M  E  E  R  V  V  V  M  M  T  T  M  M  R  G  K  N  Q  H  T  D  L  V  G  M  G  V  Q  Q  L  R  G  L  V  M  V  G  P  R  K  M  T  T  R  S  L  A  M  G  R  A  V  T  M  M  K  A  M  V  A  R  N  M :   V  I  L  T  L  T  P  T  R  R  R  I  K  I  V  A  K  S  T  P  M  M  I  E  Q  S  H  D  F  L  K  C  D  L  F  M  C  Y  L  K  L  V  S  S  K  *  N  K  I  G  M  S  S  Q  C  F  I  V  T  L  Q  K  T  L  M  I  E  L  R  C  F  C  H  P  L  Q  I  Y  A  I  L  L  L  L  N  E  L  F  Y  V  F  V  E  S  C  L  Y  R  E  G  N  A  S  S  Y  L  Y  </second_frame>
            <third_frame>   N  F  I  N  R  E  E  N  N  F  *  N  *  H  N  H  V  L  R  *  K  *  V  W  W  K  W  N  W  I  R  T  G  K  T  Q  K  V  T  W  I  W  I  W  T  K  R  R  *  *  A  P  I  *  I  W  I  W  L  R  V  K  K  C  Y  S  *  L  *  *  S  V  R  V  R  W  I  W  E  Q  N  R  I  R  W  A  W  K  E  K  *  I  R  G  *  E  F  G  I  W  I  W  L  W  K  *  I  G  W  I  W  E  *  N  H  I  H  R  V  W  R  *  F  G  W  V  W  G  *  N  H  I  H  R  I  W  R  *  F  E  W  V  W  E  *  N  H  I  H  R  V  W  K  *  F  G  W  I  W  E  *  N  H  I  H  R  V  W  R  R  F  G  W  V  W  E  *  N  H  I  H  R  V  W  R  *  I  G  W  V  W  E  *  N  H  I  H  W  I  W  E  *  I  G  W  V  W  K  *  N  N  L  H  R  V  W  K  *  I  G  W  V  W  E  *  N  H  I  Y  R  V  W  R  *  I  G  W  V  W  E  *  N  H  I  Y  R  V  R  R  *  I  G  W  I  W  E  *  N  Q  I  H  R  S  W  K  K  E  W  W  *  *  *  R  R  *  *  G  E  K  I  S  I  R  I  *  W  V  W  E  F  N  S  *  E  A  *  L  W  *  V  R  G  R  *  L  Q  E  V  *  L  W  E  G  R  *  R  *  *  R  L  W  S  Q  E  I   : W  *  F  *  L  *  L  R  Q  G  E  E  *  K  S  S  Q  K  A  L  R  *  *  L  S  R  V  M  I  F  S  N  V  I  Y  S  C  V  I  *  S  *  L  V  V  N  K  I  K  L  A  C  L  H  S  V  L  L  L  R  C  K  K  H  *  *  L  S  *  D  A  F  V  I  R  S  K  F  M  P  Y  Y  Y  Y  *  M  N  F  F  M  C  L  S  S  H  V  C  T  E  K  E  M  P  V  V  I  C  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0190N21.3" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="99512" stop="98563"/>
                    <exon start="98485" stop="98347"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1086</number_coding_nucleotides>
                  <number_encoded_amino_acids>362</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FLKLTQSCLTVKVSMVEVELDPDRENPKSHMDLDMDETTMMSPNLNMDLVTGQKVLLMTLMISTGQVDMGAKPDPVGMEGKVNTGIRVRNMDLVMEMNRVDMGVKPHPPGMEMIRVGMGVKPHPPDMEMIRMGMGVKPHPPGMEMIRVDMGVKPHPPGMETIRVGMGVKPHPPGMEMNRVGMGVKPHPLDMGMNRVGMEVKQPPPGMEMNRVGMGVKPHLPGMEMNRVGMGVKPHLPGTEMNRVDMGVKPNPPVMEERVVVMMTTMMRGKNQHTDLVGMGVQQLRGLVMVGPRKMTTRSLAMGRAVTMMKAMVARNMVILTLTPTRRRIKIVAKSTPMMIEQSHDFLKCDLFMCYLKLVSSK*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0190N21.3" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="99540" stop="98563"/>
                    <exon start="98485" stop="98414"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1047</number_coding_nucleotides>
                  <number_encoded_amino_acids>349</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SILSIEKKIIFEINTIMSYGESEYGGSGIGSGQGKPKKSHGSGYGRNDDDEPQSEYGSGYGSKSATHDSDDQYGSGGYGSKTGSGGHGRKSEYGDKSSEYGSGYGNESGGYGSKTTSTGYGDDSGGYGGKTTSTGYGDDSNGYGSKTTSTGYGNDSGGYGSKTTSTGYGDDSGGYGSKTTSTGYGDESGGYGSKTTSTGYGNESGGYGSKTTSTGYGNESGGYGSKTTSTGYGDESGGYGSKTTSTGYGDESGGYGSKTKSTGHGRKSGGDDDDDDEGKKSAYGSSGYGSSTVERPSYGRSEEDDYKKSSYGKGGDDDEGYGRKKYGDSDSDSDKEKNKNRRKKHSDDD*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="-" PGL_start="107423" PGL_stop="106934"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="107423" e_stop="106934"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="107423" e_stop="106934" e_length="490"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107423" stop="106934"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U602109" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATGCTGCAGATGTGCTTGACTGGAGTTGATGGGATCCATATCCCTGAAGATTTGTGGTTGCAATGTTTTGATCAGGTGATATTTACATTACTAGATGAATTACTCAATCTTGCCCAGCCGAGCTTTGTGAAGGATTATAGGAGCACTGAAGGAGCAATAGTTTTGGCACTGAAGCTCATGTTCAAAATGTTTTTACAGTCTTTGAATCATCTCTCCCAGTCGACATCCTTTTGCAAACTGTGGTTAGGGGTCTTGAGTCTAACAGAGAGATGCATGAAGGTGAAATTTAAAGGGAAATGGAGTGAAAAGATCCCTGAACTCATTTCCGAGCTCCTAAAGAACACTCTACTTGTCATGAAAACAAGTGGAATTCTGGGGCCAAGTAATCCTGTAGGAGGGGACAGCTTCTGGAAGTCAACATGGTTGCATGTCCACAAAATATGCCCATCCCTTCAGACAGAAATCTTTCCCACAAACGAAGCAGAACAGT</gDNA_template>
            <first_frame> M  L  Q  M  C  L  T  G  V  D  G  I  H  I  P  E  D  L  W  L  Q  C  F  D  Q  V  I  F  T  L  L  D  E  L  L  N  L  A  Q  P  S  F  V  K  D  Y  R  S  T  E  G  A  I  V  L  A  L  K  L  M  F  K  M  F  L  Q  S  L  N  H  L  S  Q  S  T  S  F  C  K  L  W  L  G  V  L  S  L  T  E  R  C  M  K  V  K  F  K  G  K  W  S  E  K  I  P  E  L  I  S  E  L  L  K  N  T  L  L  V  M  K  T  S  G  I  L  G  P  S  N  P  V  G  G  D  S  F  W  K  S  T  W  L  H  V  H  K  I  C  P  S  L  Q  T  E  I  F  P  T  N  E  A  E  Q  </first_frame>
            <second_frame>  C  C  R  C  A  *  L  E  L  M  G  S  I  S  L  K  I  C  G  C  N  V  L  I  R  *  Y  L  H  Y  *  M  N  Y  S  I  L  P  S  R  A  L  *  R  I  I  G  A  L  K  E  Q  *  F  W  H  *  S  S  C  S  K  C  F  Y  S  L  *  I  I  S  P  S  R  H  P  F  A  N  C  G  *  G  S  *  V  *  Q  R  D  A  *  R  *  N  L  K  G  N  G  V  K  R  S  L  N  S  F  P  S  S  *  R  T  L  Y  L  S  *  K  Q  V  E  F  W  G  Q  V  I  L  *  E  G  T  A  S  G  S  Q  H  G  C  M  S  T  K  Y  A  H  P  F  R  Q  K  S  F  P  Q  T  K  Q  N  S </second_frame>
            <third_frame>   A  A  D  V  L  D  W  S  *  W  D  P  Y  P  *  R  F  V  V  A  M  F  *  S  G  D  I  Y  I  T  R  *  I  T  Q  S  C  P  A  E  L  C  E  G  L  *  E  H  *  R  S  N  S  F  G  T  E  A  H  V  Q  N  V  F  T  V  F  E  S  S  L  P  V  D  I  L  L  Q  T  V  V  R  G  L  E  S  N  R  E  M  H  E  G  E  I  *  R  E  M  E  *  K  D  P  *  T  H  F  R  A  P  K  E  H  S  T  C  H  E  N  K  W  N  S  G  A  K  *  S  C  R  R  G  Q  L  L  E  V  N  M  V  A  C  P  Q  N  M  P  I  P  S  D  R  N  L  S  H  K  R  S  R  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0190N21.3" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="107423" stop="106935"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>489</number_coding_nucleotides>
                  <number_encoded_amino_acids>163</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MLQMCLTGVDGIHIPEDLWLQCFDQVIFTLLDELLNLAQPSFVKDYRSTEGAIVLALKLMFKMFLQSLNHLSQSTSFCKLWLGVLSLTERCMKVKFKGKWSEKIPELISELLKNTLLVMKTSGILGPSNPVGGDSFWKSTWLHVHKICPSLQTEIFPTNEAEQ</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="112557" PGL_stop="111990"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="112557" e_stop="111990"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="112557" e_stop="111990" e_length="568"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="112557" stop="111990"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U599859" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAGAAATTGGTGCTGTTTTGGCCGTTATGAGGAGAAATGTAAGGTGGGGGTTCCATTATGCTGCTGCTGATGATCAGCTAGAGCATCCTCTCATACATTCTTTCAAGGAATTACGGAAAAATGTCTTCTCATGGAAACATCACTGGAACAGAGTTGATCCACTCCTATATCTTCAGCCTTTCTTGGATGTGATTCAATCTGATGAAACTGGTGCACCAATAACCGGTGTTGCACTGTCTTCTGTTTACAAATTCTTAACCCTTGAAATAATTGATTCATCTATCATGAATGTGGAGAAAGCTTTATATCAGATAGTTGAGACCGTGACAAGTTGCCGCTTTGAAGTGACTGATCCTGCCTCTGAGGAAGTGGTACTGATGAAGATACTTCAGGTTCTTTTGGCTTGCATGAAAAGTAAGGCATCAGAAAATTTAAGTAATCATCACGTGTGCAACATTGTAAACACTTGCTTTCGGCTTGTTCATCAAGCTAGTGCCAAAAGTGAACTGCTGCAGAGAATAGCAAGACACACAATGCATGAATTGGTGAGACACATTTTCGCTCACCT</gDNA_template>
            <first_frame> Q  K  L  V  L  F  W  P  L  *  G  E  M  *  G  G  G  S  I  M  L  L  L  M  I  S  *  S  I  L  S  Y  I  L  S  R  N  Y  G  K  M  S  S  H  G  N  I  T  G  T  E  L  I  H  S  Y  I  F  S  L  S  W  M  *  F  N  L  M  K  L  V  H  Q  *  P  V  L  H  C  L  L  F  T  N  S  *  P  L  K  *  L  I  H  L  S  *  M  W  R  K  L  Y  I  R  *  L  R  P  *  Q  V  A  A  L  K  *  L  I  L  P  L  R  K  W  Y  *  *  R  Y  F  R  F  F  W  L  A  *  K  V  R  H  Q  K  I  *  V  I  I  T  C  A  T  L  *  T  L  A  F  G  L  F  I  K  L  V  P  K  V  N  C  C  R  E  *  Q  D  T  Q  C  M  N  W  *  D  T  F  S  L  T  </first_frame>
            <second_frame>  R  N  W  C  C  F  G  R  Y  E  E  K  C  K  V  G  V  P  L  C  C  C  *  *  S  A  R  A  S  S  H  T  F  F  Q  G  I  T  E  K  C  L  L  M  E  T  S  L  E  Q  S  *  S  T  P  I  S  S  A  F  L  G  C  D  S  I  *  *  N  W  C  T  N  N  R  C  C  T  V  F  C  L  Q  I  L  N  P  *  N  N  *  F  I  Y  H  E  C  G  E  S  F  I  S  D  S  *  D  R  D  K  L  P  L  *  S  D  *  S  C  L  *  G  S  G  T  D  E  D  T  S  G  S  F  G  L  H  E  K  *  G  I  R  K  F  K  *  S  S  R  V  Q  H  C  K  H  L  L  S  A  C  S  S  S  *  C  Q  K  *  T  A  A  E  N  S  K  T  H  N  A  *  I  G  E  T  H  F  R  S  P </second_frame>
            <third_frame>   E  I  G  A  V  L  A  V  M  R  R  N  V  R  W  G  F  H  Y  A  A  A  D  D  Q  L  E  H  P  L  I  H  S  F  K  E  L  R  K  N  V  F  S  W  K  H  H  W  N  R  V  D  P  L  L  Y  L  Q  P  F  L  D  V  I  Q  S  D  E  T  G  A  P  I  T  G  V  A  L  S  S  V  Y  K  F  L  T  L  E  I  I  D  S  S  I  M  N  V  E  K  A  L  Y  Q  I  V  E  T  V  T  S  C  R  F  E  V  T  D  P  A  S  E  E  V  V  L  M  K  I  L  Q  V  L  L  A  C  M  K  S  K  A  S  E  N  L  S  N  H  H  V  C  N  I  V  N  T  C  F  R  L  V  H  Q  A  S  A  K  S  E  L  L  Q  R  I  A  R  H  T  M  H  E  L  V  R  H  I  F  A  H   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0190N21.3" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="112555" stop="111992"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>564</number_coding_nucleotides>
                  <number_encoded_amino_acids>188</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EIGAVLAVMRRNVRWGFHYAAADDQLEHPLIHSFKELRKNVFSWKHHWNRVDPLLYLQPFLDVIQSDETGAPITGVALSSVYKFLTLEIIDSSIMNVEKALYQIVETVTSCRFEVTDPASEEVVLMKILQVLLACMKSKASENLSNHHVCNIVNTCFRLVHQASAKSELLQRIARHTMHELVRHIFAH</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="129384" PGL_stop="117719"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="129384" e_stop="129127"/>
            <exon e_start="127673" e_stop="127480"/>
            <exon e_start="126930" e_stop="126746"/>
            <exon e_start="126657" e_stop="126475"/>
            <exon e_start="123348" e_stop="123217"/>
            <exon e_start="122622" e_stop="122437"/>
            <exon e_start="120203" e_stop="120114"/>
            <exon e_start="120042" e_stop="119959"/>
            <exon e_start="119731" e_stop="119594"/>
            <exon e_start="119171" e_stop="118929"/>
            <exon e_start="118182" e_stop="117719"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.956" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.920" e_score="1.000"/>
          <exon-intron don_prob="0.964" acc_prob="0.934" e_score="1.000"/>
          <exon-intron don_prob="0.906" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.930" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.936" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.973" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.993" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="129384" e_stop="129127" e_length="258"/>
          </exon>
          <intron i_serial="1" don_prob="0.956" acc_prob="1.000">
            <gDNA_intron_boundary i_start="129126" i_stop="127674" i_length="1453"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="127673" e_stop="127480" e_length="194"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.920">
            <gDNA_intron_boundary i_start="127479" i_stop="126931" i_length="549"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="126930" e_stop="126746" e_length="185"/>
          </exon>
          <intron i_serial="3" don_prob="0.964" acc_prob="0.934">
            <gDNA_intron_boundary i_start="126745" i_stop="126658" i_length="88"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="126657" e_stop="126475" e_length="183"/>
          </exon>
          <intron i_serial="4" don_prob="0.906" acc_prob="0.998">
            <gDNA_intron_boundary i_start="126474" i_stop="123349" i_length="3126"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="123348" e_stop="123217" e_length="132"/>
          </exon>
          <intron i_serial="5" don_prob="0.986" acc_prob="0.930">
            <gDNA_intron_boundary i_start="123216" i_stop="122623" i_length="594"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="122622" e_stop="122437" e_length="186"/>
          </exon>
          <intron i_serial="6" don_prob="0.997" acc_prob="0.936">
            <gDNA_intron_boundary i_start="122436" i_stop="120204" i_length="2233"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="120203" e_stop="120114" e_length="90"/>
          </exon>
          <intron i_serial="7" don_prob="1.000" acc_prob="0.983">
            <gDNA_intron_boundary i_start="120113" i_stop="120043" i_length="71"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="120042" e_stop="119959" e_length="84"/>
          </exon>
          <intron i_serial="8" don_prob="0.973" acc_prob="1.000">
            <gDNA_intron_boundary i_start="119958" i_stop="119732" i_length="227"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="119731" e_stop="119594" e_length="138"/>
          </exon>
          <intron i_serial="9" don_prob="0.998" acc_prob="0.993">
            <gDNA_intron_boundary i_start="119593" i_stop="119172" i_length="422"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="119171" e_stop="118929" e_length="243"/>
          </exon>
          <intron i_serial="10" don_prob="0.999" acc_prob="0.993">
            <gDNA_intron_boundary i_start="118928" i_stop="118183" i_length="746"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="118182" e_stop="117719" e_length="464"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="129384" stop="129127"/>
              <exon start="127673" stop="127480"/>
              <exon start="126930" stop="126746"/>
              <exon start="126657" stop="126475"/>
              <exon start="123348" stop="123217"/>
              <exon start="122622" stop="122437"/>
              <exon start="120203" stop="120114"/>
              <exon start="120042" stop="119959"/>
              <exon start="119731" stop="119594"/>
              <exon start="119171" stop="118929"/>
              <exon start="118182" stop="117719"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U564382" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTGAATACCAGGGGGGAAAAATTAACAGAATCAAAAATCAGTGAACTCCATTCTTGTGCTTCTGCAGCCATCCTTACCCCCACCCCCCGAATCTCCTCCACCCCACGACTGGCCTCAACTTCTTCCCCCTGTATTCCAGGAGGCCATTGATACTCTCTTTCATCACCAAATGTTGAAGATAATCGCTTGATTTTCCCAATTTTCATATTTTGTTGTTGAATTTCTTCAATCTGCTTCTTGGGGTTTAGCTTCTGCCAG : GAAAATGGACGGAACAGCAGTGCAGGGCACCAGCAGTGTTGACTCATTTTTACGGAACTATAAACTCGGGAAAACACTTGGCATTGGATCGTTCGGCAAAGTTAAAATAGCTGAACATACGTTAACAGGGCACAAAGTTGCTGTCAAGATTCTTAATCGTCGAAAAATCAGGAATATGGACATGGAGGAGAAAG : TCCGTAGAGAAATCAAAATATTGAGATTGTTCATGCATCCTCATATTATACGGCTTTATGAGGTCATAGAGACACCATCAGATATATATGTTGTGATGGAGTATGTGAAATCTGGCGAGTTATTTGATTACATTGTTGAGAAGGGCAGATTGCAGGAGGATGAAGCTCGTAACTTTTTTCAGCAG : ATAATTTCTGGTGTGGAGTACTGCCATAGAAACATGGTGGTTCATAGAGACCTTAAGCCTGAAAACCTCCTTCTGGACTCCAAATGGAATGTGAAGATCGCAGATTTTGGTTTGAGCAATATCATGCGCGATGGTCATTTTCTGAAGACAAGTTGCGGAAGCCCAAACTATGCTGCCCCAGAG : GTTATATCAGGTAAATTGTATGCTGGCCCTGAGGTAGATGTATGGAGCTGTGGTGTTATTCTTTATGCTCTTCTCTGTGGCACCCTTCCGTTTGACGATGAAAACATACCCAATCTTTTTAAGAAAATAAAG : GGTGGAATATATACTCTGCCCAGCCATTTATCAGCTGGTGCGAGGGATTTGATTCCGAGGATGCTTATAGTCGACCCAATGAAGCGAATGACTATTCCTGAGATTCGCCTGCACCCTTGGTTCCAAGCTCATTTGCCACGCTATTTGGCCGTGCCTCCACCAGATACAACCCAACAAGCAAAGAAG : ATCGATGAAGAGATTCTTCAAGAGGTGGTTAAGATGGGATTTGACAGGAACAACCTTACTGAGTCTCTTCGCAATAGAGTTCAAAATGAG : GGCACTGTTGCATACTATCTGCTCCTGGACAATCGCCATCGTGTTTCCACTGGCTATCTTGGAGCTGAATTTCAGGAGTCCATG : GAATATGGTTACAACCGGATCAATTCTAATGAAACCGCTGCTTCCCCTGTTGGTCAACGTTTCCCAGGAATAATGGATTATCAGCAAGCTGGTGCAAGACAGTTCCCCATTGAAAGAAAATGGGCTCTTGGCCTCCAG : TCTCGAGCGCATCCACGTGAAATAATGACTGAAGTTTTGAAAGCTCTGCAAGAACTGAATGTATGTTGGAAAAAGATTGGTCAGTATAACATGAAATGTCGATGGGTTCCTAGCTTACCTGGTCATCATGAAGGCATGGGTGTTAATTCCATGCATGGGAATCAGTTCTTTGGAGATGATTCATCCATCATTGAGAATGATGGGGCCACAAAGTTAACAAATGTGGTCAAGTTTGAAGTTCAG : CTTTACAAAACCAGGGAGGAGAAGTACTTGCTTGACCTTCAGAGACTTCAGGGTCCACAATTCCTCTTCCTGGATCTCTGTGCTGCTTTTCTTGCTCAGCTTCGAGTACTTTAAAGTCTCCGAAATAAGGAGCTAAGTTGGAAAAAGCCCATGCTTGTATATAATTGGTATACCAGCTCAGTTACTGCATTTTGTCTTGTTAACAAATTCCACCCTGCTTGGTCAGAGGTGCCTAGCAACTCTTTTTTTCTTTTGATTCGCTAGGAGATCTAGCTCACTCTCTTTTTTAACGTTTATGGAATTTCAGTTACCTACAGTATCTACTTACAGATTGAACTGCAAGATGAGCGCGATGTCTGTCTGTGACCCATTCCCTCTTCTCCCCTTATCGACGATCATTTGGAGTCCAACGAAGATTTTCTTGTGTCAAATTTGAAATGTTTGTCTGAATAAAAACAAGTCCC</gDNA_template>
            <first_frame> V  N  T  R  G  E  K  L  T  E  S  K  I  S  E  L  H  S  C  A  S  A  A  I  L  T  P  T  P  R  I  S  S  T  P  R  L  A  S  T  S  S  P  C  I  P  G  G  H  *  Y  S  L  S  S  P  N  V  E  D  N  R  L  I  F  P  I  F  I  F  C  C  *  I  S  S  I  C  F  L  G  F  S  F  C  Q  :  E  N  G  R  N  S  S  A  G  H  Q  Q  C  *  L  I  F  T  E  L  *  T  R  E  N  T  W  H  W  I  V  R  Q  S  *  N  S  *  T  Y  V  N  R  A  Q  S  C  C  Q  D  S  *  S  S  K  N  Q  E  Y  G  H  G  G  E  S :   P  *  R  N  Q  N  I  E  I  V  H  A  S  S  Y  Y  T  A  L  *  G  H  R  D  T  I  R  Y  I  C  C  D  G  V  C  E  I  W  R  V  I  *  L  H  C  *  E  G  Q  I  A  G  G  *  S  S  *  L  F  S  A   : D  N  F  W  C  G  V  L  P  *  K  H  G  G  S  *  R  P  *  A  *  K  P  P  S  G  L  Q  M  E  C  E  D  R  R  F  W  F  E  Q  Y  H  A  R  W  S  F  S  E  D  K  L  R  K  P  K  L  C  C  P  R   : G  Y  I  R  *  I  V  C  W  P  *  G  R  C  M  E  L  W  C  Y  S  L  C  S  S  L  W  H  P  S  V  *  R  *  K  H  T  Q  S  F  *  E  N  K   : G  W  N  I  Y  S  A  Q  P  F  I  S  W  C  E  G  F  D  S  E  D  A  Y  S  R  P  N  E  A  N  D  Y  S  *  D  S  P  A  P  L  V  P  S  S  F  A  T  L  F  G  R  A  S  T  R  Y  N  P  T  S  K  E   : D  R  *  R  D  S  S  R  G  G  *  D  G  I  *  Q  E  Q  P  Y  *  V  S  S  Q  *  S  S  K  *   : G  H  C  C  I  L  S  A  P  G  Q  S  P  S  C  F  H  W  L  S  W  S  *  I  S  G  V  H   : G  I  W  L  Q  P  D  Q  F  *  *  N  R  C  F  P  C  W  S  T  F  P  R  N  N  G  L  S  A  S  W  C  K  T  V  P  H  *  K  K  M  G  S  W  P  P   : V  S  S  A  S  T  *  N  N  D  *  S  F  E  S  S  A  R  T  E  C  M  L  E  K  D  W  S  V  *  H  E  M  S  M  G  S  *  L  T  W  S  S  *  R  H  G  C  *  F  H  A  W  E  S  V  L  W  R  *  F  I  H  H  *  E  *  W  G  H  K  V  N  K  C  G  Q  V  *  S  S   : A  L  Q  N  Q  G  G  E  V  L  A  *  P  S  E  T  S  G  S  T  I  P  L  P  G  S  L  C  C  F  S  C  S  A  S  S  T  L  K  S  P  K  *  G  A  K  L  E  K  A  H  A  C  I  *  L  V  Y  Q  L  S  Y  C  I  L  S  C  *  Q  I  P  P  C  L  V  R  G  A  *  Q  L  F  F  S  F  D  S  L  G  D  L  A  H  S  L  F  *  R  L  W  N  F  S  Y  L  Q  Y  L  L  T  D  *  T  A  R  *  A  R  C  L  S  V  T  H  S  L  F  S  P  Y  R  R  S  F  G  V  Q  R  R  F  S  C  V  K  F  E  M  F  V  *  I  K  T  S  P </first_frame>
            <second_frame>  *  I  P  G  G  K  N  *  Q  N  Q  K  S  V  N  S  I  L  V  L  L  Q  P  S  L  P  P  P  P  E  S  P  P  P  H  D  W  P  Q  L  L  P  P  V  F  Q  E  A  I  D  T  L  F  H  H  Q  M  L  K  I  I  A  *  F  S  Q  F  S  Y  F  V  V  E  F  L  Q  S  A  S  W  G  L  A  S  A  R :   K  M  D  G  T  A  V  Q  G  T  S  S  V  D  S  F  L  R  N  Y  K  L  G  K  T  L  G  I  G  S  F  G  K  V  K  I  A  E  H  T  L  T  G  H  K  V  A  V  K  I  L  N  R  R  K  I  R  N  M  D  M  E  E  K   : V  R  R  E  I  K  I  L  R  L  F  M  H  P  H  I  I  R  L  Y  E  V  I  E  T  P  S  D  I  Y  V  V  M  E  Y  V  K  S  G  E  L  F  D  Y  I  V  E  K  G  R  L  Q  E  D  E  A  R  N  F  F  Q  Q  :  I  I  S  G  V  E  Y  C  H  R  N  M  V  V  H  R  D  L  K  P  E  N  L  L  L  D  S  K  W  N  V  K  I  A  D  F  G  L  S  N  I  M  R  D  G  H  F  L  K  T  S  C  G  S  P  N  Y  A  A  P  E  :  V  I  S  G  K  L  Y  A  G  P  E  V  D  V  W  S  C  G  V  I  L  Y  A  L  L  C  G  T  L  P  F  D  D  E  N  I  P  N  L  F  K  K  I  K  :  G  G  I  Y  T  L  P  S  H  L  S  A  G  A  R  D  L  I  P  R  M  L  I  V  D  P  M  K  R  M  T  I  P  E  I  R  L  H  P  W  F  Q  A  H  L  P  R  Y  L  A  V  P  P  P  D  T  T  Q  Q  A  K  K  :  I  D  E  E  I  L  Q  E  V  V  K  M  G  F  D  R  N  N  L  T  E  S  L  R  N  R  V  Q  N  E  :  G  T  V  A  Y  Y  L  L  L  D  N  R  H  R  V  S  T  G  Y  L  G  A  E  F  Q  E  S  M  :  E  Y  G  Y  N  R  I  N  S  N  E  T  A  A  S  P  V  G  Q  R  F  P  G  I  M  D  Y  Q  Q  A  G  A  R  Q  F  P  I  E  R  K  W  A  L  G  L  Q  :  S  R  A  H  P  R  E  I  M  T  E  V  L  K  A  L  Q  E  L  N  V  C  W  K  K  I  G  Q  Y  N  M  K  C  R  W  V  P  S  L  P  G  H  H  E  G  M  G  V  N  S  M  H  G  N  Q  F  F  G  D  D  S  S  I  I  E  N  D  G  A  T  K  L  T  N  V  V  K  F  E  V  Q  :  L  Y  K  T  R  E  E  K  Y  L  L  D  L  Q  R  L  Q  G  P  Q  F  L  F  L  D  L  C  A  A  F  L  A  Q  L  R  V  L  *  S  L  R  N  K  E  L  S  W  K  K  P  M  L  V  Y  N  W  Y  T  S  S  V  T  A  F  C  L  V  N  K  F  H  P  A  W  S  E  V  P  S  N  S  F  F  L  L  I  R  *  E  I  *  L  T  L  F  F  N  V  Y  G  I  S  V  T  Y  S  I  Y  L  Q  I  E  L  Q  D  E  R  D  V  C  L  *  P  I  P  S  S  P  L  I  D  D  H  L  E  S  N  E  D  F  L  V  S  N  L  K  C  L  S  E  *  K  Q  V   </second_frame>
            <third_frame>   E  Y  Q  G  G  K  I  N  R  I  K  N  Q  *  T  P  F  L  C  F  C  S  H  P  Y  P  H  P  P  N  L  L  H  P  T  T  G  L  N  F  F  P  L  Y  S  R  R  P  L  I  L  S  F  I  T  K  C  *  R  *  S  L  D  F  P  N  F  H  I  L  L  L  N  F  F  N  L  L  L  G  V  *  L  L  P   : G  K  W  T  E  Q  Q  C  R  A  P  A  V  L  T  H  F  Y  G  T  I  N  S  G  K  H  L  A  L  D  R  S  A  K  L  K  *  L  N  I  R  *  Q  G  T  K  L  L  S  R  F  L  I  V  E  K  S  G  I  W  T  W  R  R  K  :  S  V  E  K  S  K  Y  *  D  C  S  C  I  L  I  L  Y  G  F  M  R  S  *  R  H  H  Q  I  Y  M  L  *  W  S  M  *  N  L  A  S  Y  L  I  T  L  L  R  R  A  D  C  R  R  M  K  L  V  T  F  F  S  R :   *  F  L  V  W  S  T  A  I  E  T  W  W  F  I  E  T  L  S  L  K  T  S  F  W  T  P  N  G  M  *  R  S  Q  I  L  V  *  A  I  S  C  A  M  V  I  F  *  R  Q  V  A  E  A  Q  T  M  L  P  Q  R :   L  Y  Q  V  N  C  M  L  A  L  R  *  M  Y  G  A  V  V  L  F  F  M  L  F  S  V  A  P  F  R  L  T  M  K  T  Y  P  I  F  L  R  K  *  R :   V  E  Y  I  L  C  P  A  I  Y  Q  L  V  R  G  I  *  F  R  G  C  L  *  S  T  Q  *  S  E  *  L  F  L  R  F  A  C  T  L  G  S  K  L  I  C  H  A  I  W  P  C  L  H  Q  I  Q  P  N  K  Q  R  R :   S  M  K  R  F  F  K  R  W  L  R  W  D  L  T  G  T  T  L  L  S  L  F  A  I  E  F  K  M  R :   A  L  L  H  T  I  C  S  W  T  I  A  I  V  F  P  L  A  I  L  E  L  N  F  R  S  P  W :   N  M  V  T  T  G  S  I  L  M  K  P  L  L  P  L  L  V  N  V  S  Q  E  *  W  I  I  S  K  L  V  Q  D  S  S  P  L  K  E  N  G  L  L  A  S  S :   L  E  R  I  H  V  K  *  *  L  K  F  *  K  L  C  K  N  *  M  Y  V  G  K  R  L  V  S  I  T  *  N  V  D  G  F  L  A  Y  L  V  I  M  K  A  W  V  L  I  P  C  M  G  I  S  S  L  E  M  I  H  P  S  L  R  M  M  G  P  Q  S  *  Q  M  W  S  S  L  K  F  S :   F  T  K  P  G  R  R  S  T  C  L  T  F  R  D  F  R  V  H  N  S  S  S  W  I  S  V  L  L  F  L  L  S  F  E  Y  F  K  V  S  E  I  R  S  *  V  G  K  S  P  C  L  Y  I  I  G  I  P  A  Q  L  L  H  F  V  L  L  T  N  S  T  L  L  G  Q  R  C  L  A  T  L  F  F  F  *  F  A  R  R  S  S  S  L  S  F  L  T  F  M  E  F  Q  L  P  T  V  S  T  Y  R  L  N  C  K  M  S  A  M  S  V  C  D  P  F  P  L  L  P  L  S  T  I  I  W  S  P  T  K  I  F  L  C  Q  I  *  N  V  C  L  N  K  N  K  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0190N21.3" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="129194" stop="129127"/>
                    <exon start="127673" stop="127480"/>
                    <exon start="126930" stop="126746"/>
                    <exon start="126657" stop="126475"/>
                    <exon start="123348" stop="123217"/>
                    <exon start="122622" stop="122437"/>
                    <exon start="120203" stop="120114"/>
                    <exon start="120042" stop="119959"/>
                    <exon start="119731" stop="119594"/>
                    <exon start="119171" stop="118929"/>
                    <exon start="118182" stop="118069"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1614</number_coding_nucleotides>
                  <number_encoded_amino_acids>538</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FSQFSYFVVEFLQSASWGLASARKMDGTAVQGTSSVDSFLRNYKLGKTLGIGSFGKVKIAEHTLTGHKVAVKILNRRKIRNMDMEEKVRREIKILRLFMHPHIIRLYEVIETPSDIYVVMEYVKSGELFDYIVEKGRLQEDEARNFFQQIISGVEYCHRNMVVHRDLKPENLLLDSKWNVKIADFGLSNIMRDGHFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSAGARDLIPRMLIVDPMKRMTIPEIRLHPWFQAHLPRYLAVPPPDTTQQAKKIDEEILQEVVKMGFDRNNLTESLRNRVQNEGTVAYYLLLDNRHRVSTGYLGAEFQESMEYGYNRINSNETAASPVGQRFPGIMDYQQAGARQFPIERKWALGLQSRAHPREIMTEVLKALQELNVCWKKIGQYNMKCRWVPSLPGHHEGMGVNSMHGNQFFGDDSSIIENDGATKLTNVVKFEVQLYKTREEKYLLDLQRLQGPQFLFLDLCAAFLAQLRVL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="+" PGL_start="141526" PGL_stop="143508"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="141526" e_stop="141809"/>
            <exon e_start="143412" e_stop="143508"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.957" acc_prob="0.917" e_score="0.951"/>
          <exon-only e_score="0.948"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.951">
            <gDNA_exon_boundary e_start="141526" e_stop="141809" e_length="284"/>
          </exon>
          <intron i_serial="1" don_prob="0.957" acc_prob="0.917">
            <gDNA_intron_boundary i_start="141810" i_stop="143411" i_length="1602"/>
          </intron>
          <exon e_serial="2" e_score="0.948">
            <gDNA_exon_boundary e_start="143412" e_stop="143508" e_length="97"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="141526" stop="141809"/>
              <exon start="143412" stop="143508"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U565964" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACTCTCAGAAATTACGTCAAATTACCATCTTATCCTTCTTCTTCTTCTTCCTCTCAATTCTCTCTGTTTTTCTTTTTTTTTTCAGAAAAAAATTTCCACAGAAACAAATCCAAAAGAGCTTGGATCCGACCCGTTTGGACCCATTTGCTCTTTCTAGTTTCTTCTCCTTTCTCTCTCTCTGTTTCTTGAAATTTTTTTCATTTTTTTTTCACAGAGAGGGAGACCTACATTCATTTATTATTATTATTGTTAATGGTGTTCTCTTCATTCAAAAAAACAAAAAG : GTATACATAATTTCGTGAGTCCAATCGAAATTTACATCTTTGCATGGTGTTCATCAGCAATTAGCAGACAGATTTGTGAGCTGAGTAGTAATAATGG</gDNA_template>
            <first_frame> T  L  R  N  Y  V  K  L  P  S  Y  P  S  S  S  S  S  S  Q  F  S  L  F  F  F  F  F  S  E  K  N  F  H  R  N  K  S  K  R  A  W  I  R  P  V  W  T  H  L  L  F  L  V  S  S  P  F  S  L  S  V  S  *  N  F  F  H  F  F  F  T  E  R  E  T  Y  I  H  L  L  L  L  L  L  M  V  F  S  S  F  K  K  T  K  R :   Y  T  *  F  R  E  S  N  R  N  L  H  L  C  M  V  F  I  S  N  *  Q  T  D  L  *  A  E  *  *  *  W </first_frame>
            <second_frame>  L  S  E  I  T  S  N  Y  H  L  I  L  L  L  L  L  P  L  N  S  L  C  F  S  F  F  F  Q  K  K  I  S  T  E  T  N  P  K  E  L  G  S  D  P  F  G  P  I  C  S  F  *  F  L  L  L  S  L  S  L  F  L  E  I  F  F  I  F  F  S  Q  R  G  R  P  T  F  I  Y  Y  Y  Y  C  *  W  C  S  L  H  S  K  K  Q  K   : G  I  H  N  F  V  S  P  I  E  I  Y  I  F  A  W  C  S  S  A  I  S  R  Q  I  C  E  L  S  S  N  N   </second_frame>
            <third_frame>   S  Q  K  L  R  Q  I  T  I  L  S  F  F  F  F  F  L  S  I  L  S  V  F  L  F  F  F  R  K  K  F  P  Q  K  Q  I  Q  K  S  L  D  P  T  R  L  D  P  F  A  L  S  S  F  F  S  F  L  S  L  C  F  L  K  F  F  S  F  F  F  H  R  E  G  D  L  H  S  F  I  I  I  I  V  N  G  V  L  F  I  Q  K  N  K  K  :  V  Y  I  I  S  *  V  Q  S  K  F  T  S  L  H  G  V  H  Q  Q  L  A  D  R  F  V  S  *  V  V  I  M  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0190N21.3" strand="+"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="141528" stop="141809"/>
                    <exon start="143412" stop="143429"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>297</number_coding_nucleotides>
                  <number_encoded_amino_acids>99</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SQKLRQITILSFFFFFLSILSVFLFFFRKKFPQKQIQKSLDPTRLDPFALSSFFSFLSLCFLKFFSFFFHREGDLHSFIIIIVNGVLFIQKNKKVYIIS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 40 chains have been computed
$ 
$ memory statistics:
$ 47736 bytes spliced alignments in total
$ 21 spliced alignments have been stored
$ 2273 bytes was the average size of a spliced alignment
$ 23152 bytes predicted gene locations in total
$ 14 predicted gene locations have been stored
$ 1653 bytes was the average size of a predicted gene location
$ 1 megabytes was the average size of the backtrace matrix
$ 49 backtrace matrices have been allocated
$ 
$ date finished: 2009-12-01 09:55:31
-->
