<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-12-01 09:50:52"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E205913" ref_strand="+" ref_description="SGN-E205913 [cLEC-20-L22]">
      <seq>aaaaagacacaattgaactcagattggctaagctctgtgtagaaaggaacattccctatttgggaatatgcaggggttcacaggtactgaatgttgcatgtgggggaactcttatacaagacattggaaaagaaatatcgaaaaaccttcctgagaatcagagggtagttcatatggattacgataactatgatggtcatagacatgttatacaagttgtcgaggaaacgccattgcaccattggttcaaggactcgttggaagacgaaaaaatggagatttcagtcaatagttatcatcatcaaggagttaaaaaattggctcagagatttgttcctatggcatttgcccctgatggtttaattgaaggattctatgatccagatgcttataatcctgttgagggtaagtttattatgggacttcaatttcatccggaacgaatgagacaagaagatagtgatgaatttgattatcctggatgtacatttgcttatcaggagtttgtgaaggctgtagttgcatatcanaaaaaactgttaagcacaaccacaatcgaaaagccattgaagcttaatcaagaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0180C05.2" temp_strand="-" temp_description="C02HBa0180C05.2  AC215411.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0180C05 sequenced_by:kribb upload_account_name:korea">
        <position start="7552" stop="6177"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7252" g_stop="6753" g_length="500"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="500" r_length="500" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="6752" i_stop="6563" i_length="190">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="6562" g_stop="6477" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="501" r_stop="586" r_length="86" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0180C05.2" gen_strand="-" ref_id="SGN-E205913" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>586</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0180C05.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E205913" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7252" e_stop="6753"/>
          <exon e_start="6562" e_stop="6477"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAGACACAATTGAACTCAGATTGGCTAAGCTCTGTCTAGAAAGGAACATTCCCTATTTGGGAATATGCAGGGGTTCACAGGTACTGAATGTTGCATGTGGGGGAACTCTTATACAAGACATTGGAAAAGAAATATCGAAAAACCTTCCTGAGAATCAGAGGGTAGTTCATATGGATTACGATAACTATGATGGTCATAGACATGTTATACAAGTTGTCGAGGAAACGCCATTGCACCATTGGTTCAAGGACTCGTTGGAAGACGAAAAAATGGAGATTTCAGTCAATAGTTATCATCATCAAGGAGTTAAAAAATTGGCTCAGAGATTTGTTCCTATGGCATTTGCCCCTGATGGTTTAATTGAAGGATTCTATGATCCAGATGCTTATAATCCTGTTGAGGGTAAGTTTATTATGGGACTTCAATTTCATCCGGAACGAATGAGACAAGAAGATAGTGATGAATTTGATTATCCTGGATGTACATTTGCTTATCAGGTACCTCTATAAACTTCAATTCCTACTGAATTTTTGATCTTTTACTACGATAAATTTTCATATATTGGACTATCAGTATTACCCAGATATTCCTGGGAAAAATAATGTAACAGAGGATAATTTTGAATAGTTCATTTGACCGTTTTCGTATTAACTTTGTTCTAACAGTTGAATGTACTAATTTTGGCAGGAGTTTGTGAAGGCTGTAGTTGCATATCAGAAAAAACTGTTAAGCACAACCACAATCGAAAAGCCATTGAAGCTTAATCAAGAAAT</genome_strand>
        <mrna_strand>AAAAAGACACAATTGAACTCAGATTGGCTAAGCTCTGTGTAGAAAGGAACATTCCCTATTTGGGAATATGCAGGGGTTCACAGGTACTGAATGTTGCATGTGGGGGAACTCTTATACAAGACATTGGAAAAGAAATATCGAAAAACCTTCCTGAGAATCAGAGGGTAGTTCATATGGATTACGATAACTATGATGGTCATAGACATGTTATACAAGTTGTCGAGGAAACGCCATTGCACCATTGGTTCAAGGACTCGTTGGAAGACGAAAAAATGGAGATTTCAGTCAATAGTTATCATCATCAAGGAGTTAAAAAATTGGCTCAGAGATTTGTTCCTATGGCATTTGCCCCTGATGGTTTAATTGAAGGATTCTATGATCCAGATGCTTATAATCCTGTTGAGGGTAAGTTTATTATGGGACTTCAATTTCATCCGGAACGAATGAGACAAGAAGATAGTGATGAATTTGATTATCCTGGATGTACATTTGCTTATCAG..............................................................................................................................................................................................GAGTTTGTGAAGGCTGTAGTTGCATATCANAAAAAACTGTTAAGCACAACCACAATCGAAAAGCCATTGAAGCTTAATCAAGAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E210626" ref_strand="+" ref_description="SGN-E210626 [cLEC-68-C16]">
      <seq>ttgtgtgtctcattcttcgcctcttaaatagcactctctatctaaattttaattctcatctcttttagtatttgcattttagctactactcataagtagttgccaaaagaaaaaattaaagcaaaatttatcgtgctgccatggctgtcgaggaactctcggttgttctcccccgcgtgctcattgtctctagacgtaccgttcgtaagaacaaatttgttgattttgttggagaatatcatctcgatcttatagtaagctatggagctgttccggtgattgtacccagagtttccggggtacatttgttattagacagttttgaaccaattcatggtgttcttctctgtgaaggagaggatatcgatccttctctgtacaacgatgaactatccgatctctccgtagaagaattggaagaaattaggagattgcacgctagcgacactgcaattgacaaggaaaaagacacaattgaactcagattggctaagctctgtctagaaaggaacattccctatttgggaatatgcaggggttcacaggtactgaatgttgcatgtgggggaactcttatacaagacattggaaaagaaatatcgaaaaaccttcctgagaatcagagggtagttcatatggattacgataactatgatggtcatagacatgttatacaagttgtcgaggaaacgccattgcaccattggttcaaggactcgttgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0180C05.2" temp_strand="-" temp_description="C02HBa0180C05.2  AC215411.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0180C05 sequenced_by:kribb upload_account_name:korea">
        <position start="8094" stop="6691"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7794" g_stop="7564" g_length="231"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="231" r_length="231" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7563" i_stop="7484" i_length="80">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7483" g_stop="6991" g_length="493"/>
          <reference_exon_boundary r_type="cDNA" r_start="232" r_stop="724" r_length="493" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0180C05.2" gen_strand="-" ref_id="SGN-E210626" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>724</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0180C05.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E210626" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7794" e_stop="7564"/>
          <exon e_start="7483" e_stop="6991"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTGTGTCTCATTCTTCGCCTCTTAAATAGCACTCTCTATCTAAATTTTAATTCTCATCTCTTTTAGTATTTGCATTTTAGCTACTACTCATAAGTAGTTGCCAAAAGAAAAAATTAAAGCAAAATTTATCGTGCTGCCATGGCTGTCGAGGAACTCTCGGTTGTTCTCCCCCGCGTGCTCATTGTCTCTAGACGTACCGTTCGTAAGAACAAATTTGTTGATTTTGTTGGTACGTTATTTTTTTTTTCTTTCACATGATTATCAAAAAGATTGTAAAATTCTGAATTTCAGATTTTGATTAATTTTCAGGAGAATATCATCTCGATCTTATAGTAAGCTATGGAGCTGTTCCGGTGATTGTACCCAGAGTTTCCGGGGTACATTTGTTATTAGACAGTTTTGAACCAATTCATGGTGTTCTTCTCTGTGAAGGAGAGGATATCGATCCTTCTCTGTACAACGATGAACTATCCGATCTCTCCGTAGAAGAATTGGAAGAAATTAGGAGATTGCACGCTAGCGACACTGCAATTGACAAGGAAAAAGACACAATTGAACTCAGATTGGCTAAGCTCTGTCTAGAAAGGAACATTCCCTATTTGGGAATATGCAGGGGTTCACAGGTACTGAATGTTGCATGTGGGGGAACTCTTATACAAGACATTGGAAAAGAAATATCGAAAAACCTTCCTGAGAATCAGAGGGTAGTTCATATGGATTACGATAACTATGATGGTCATAGACATGTTATACAAGTTGTCGAGGAAACGCCATTGCACCATTGGTTCAAGGACTCGTTGGA</genome_strand>
        <mrna_strand>TTGTGTGTCTCATTCTTCGCCTCTTAAATAGCACTCTCTATCTAAATTTTAATTCTCATCTCTTTTAGTATTTGCATTTTAGCTACTACTCATAAGTAGTTGCCAAAAGAAAAAATTAAAGCAAAATTTATCGTGCTGCCATGGCTGTCGAGGAACTCTCGGTTGTTCTCCCCCGCGTGCTCATTGTCTCTAGACGTACCGTTCGTAAGAACAAATTTGTTGATTTTGTTG................................................................................GAGAATATCATCTCGATCTTATAGTAAGCTATGGAGCTGTTCCGGTGATTGTACCCAGAGTTTCCGGGGTACATTTGTTATTAGACAGTTTTGAACCAATTCATGGTGTTCTTCTCTGTGAAGGAGAGGATATCGATCCTTCTCTGTACAACGATGAACTATCCGATCTCTCCGTAGAAGAATTGGAAGAAATTAGGAGATTGCACGCTAGCGACACTGCAATTGACAAGGAAAAAGACACAATTGAACTCAGATTGGCTAAGCTCTGTCTAGAAAGGAACATTCCCTATTTGGGAATATGCAGGGGTTCACAGGTACTGAATGTTGCATGTGGGGGAACTCTTATACAAGACATTGGAAAAGAAATATCGAAAAACCTTCCTGAGAATCAGAGGGTAGTTCATATGGATTACGATAACTATGATGGTCATAGACATGTTATACAAGTTGTCGAGGAAACGCCATTGCACCATTGGTTCAAGGACTCGTTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E207107" ref_strand="+" ref_description="SGN-E207107 [cLEC-30-A3]">
      <seq>ctgccatggctgtcgaggaactctcggttgttctcccccgcgtgctcattgtctctagacgtaccgttcgtaagaacaaatttgttgattttgttggagaatatcatctcgatcttatagtaagctatggagctgttccggtgattggacccagagtttccggggtacattgggtattagacagttgggaaccaattcatggtgttcttctctgtgaaggagaggatatcgatccttctctgtacaacgatgaactatccgatctctccgtagaagaattggaagaaattacgagattgcacgctagcgacactgcaattgacaaggaaaaagacacaattgaactcagattggctaagctctgtctagaaaggaacattccctatttgggaatatgcaggggttcacaggtactgaatgttgcatgtgggggaactcttatacaagacattggaaaagaaatatcgaaaaaccttcctgagaatcagagggtagttcatatggattacgataactatgatggtcatagaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0180C05.2" temp_strand="-" temp_description="C02HBa0180C05.2  AC215411.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0180C05 sequenced_by:kribb upload_account_name:korea">
        <position start="7959" stop="6748"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7659" g_stop="7564" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="96" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7563" i_stop="7484" i_length="80">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7483" g_stop="7048" g_length="436"/>
          <reference_exon_boundary r_type="cDNA" r_start="97" r_stop="532" r_length="436" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0180C05.2" gen_strand="-" ref_id="SGN-E207107" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>532</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0180C05.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E207107" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7659" e_stop="7564"/>
          <exon e_start="7483" e_stop="7048"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGCCATGGCTGTCGAGGAACTCTCGGTTGTTCTCCCCCGCGTGCTCATTGTCTCTAGACGTACCGTTCGTAAGAACAAATTTGTTGATTTTGTTGGTACGTTATTTTTTTTTTCTTTCACATGATTATCAAAAAGATTGTAAAATTCTGAATTTCAGATTTTGATTAATTTTCAGGAGAATATCATCTCGATCTTATAGTAAGCTATGGAGCTGTTCCGGTGATTGTACCCAGAGTTTCCGGGGTACATTTGTTATTAGACAGTTTTGAACCAATTCATGGTGTTCTTCTCTGTGAAGGAGAGGATATCGATCCTTCTCTGTACAACGATGAACTATCCGATCTCTCCGTAGAAGAATTGGAAGAAATTAGGAGATTGCACGCTAGCGACACTGCAATTGACAAGGAAAAAGACACAATTGAACTCAGATTGGCTAAGCTCTGTCTAGAAAGGAACATTCCCTATTTGGGAATATGCAGGGGTTCACAGGTACTGAATGTTGCATGTGGGGGAACTCTTATACAAGACATTGGAAAAGAAATATCGAAAAACCTTCCTGAGAATCAGAGGGTAGTTCATATGGATTACGATAACTATGATGGTCATAGACA</genome_strand>
        <mrna_strand>CTGCCATGGCTGTCGAGGAACTCTCGGTTGTTCTCCCCCGCGTGCTCATTGTCTCTAGACGTACCGTTCGTAAGAACAAATTTGTTGATTTTGTTG................................................................................GAGAATATCATCTCGATCTTATAGTAAGCTATGGAGCTGTTCCGGTGATTGGACCCAGAGTTTCCGGGGTACATTGGGTATTAGACAGTTGGGAACCAATTCATGGTGTTCTTCTCTGTGAAGGAGAGGATATCGATCCTTCTCTGTACAACGATGAACTATCCGATCTCTCCGTAGAAGAATTGGAAGAAATTACGAGATTGCACGCTAGCGACACTGCAATTGACAAGGAAAAAGACACAATTGAACTCAGATTGGCTAAGCTCTGTCTAGAAAGGAACATTCCCTATTTGGGAATATGCAGGGGTTCACAGGTACTGAATGTTGCATGTGGGGGAACTCTTATACAAGACATTGGAAAAGAAATATCGAAAAACCTTCCTGAGAATCAGAGGGTAGTTCATATGGATTACGATAACTATGATGGTCATAGACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E257602" ref_strand="+" ref_description="SGN-E257602 [cLEG-45-L11]">
      <seq>ccggtgattgtacccagagtttccggggtacatttgttattagacagttttgaaccaattcatggtgttcttctctgtgaaggagaggatatcgatccttctctggacaacgatgaactatccgatctctccgtacaagaattggaagaaattaggagattgcacgctagcgacactgcaattgactaggaaaaagacactattgaactcagattgggtaagctctgtctagaaaggaacattccctatttgggaatatgcaggggttcacaagtactgaatgttgcatgtgggggaactcttatacgagacattggaaaagaaatatcgaaaaaccttcct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0180C05.2" temp_strand="-" temp_description="C02HBa0180C05.2  AC215411.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0180C05 sequenced_by:kribb upload_account_name:korea">
        <position start="7742" stop="6801"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7442" g_stop="7101" g_length="342"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="342" r_length="342" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0180C05.2" gen_strand="-" ref_id="SGN-E257602" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>342</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0180C05.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E257602" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7442" e_stop="7101"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGGTGATTGTACCCAGAGTTTCCGGGGTACATTTGTTATTAGACAGTTTTGAACCAATTCATGGTGTTCTTCTCTGTGAAGGAGAGGATATCGATCCTTCTCTGTACAACGATGAACTATCCGATCTCTCCGTAGAAGAATTGGAAGAAATTAGGAGATTGCACGCTAGCGACACTGCAATTGACAAGGAAAAAGACACAATTGAACTCAGATTGGCTAAGCTCTGTCTAGAAAGGAACATTCCCTATTTGGGAATATGCAGGGGTTCACAGGTACTGAATGTTGCATGTGGGGGAACTCTTATACAAGACATTGGAAAAGAAATATCGAAAAACCTTCCT</genome_strand>
        <mrna_strand>CCGGTGATTGTACCCAGAGTTTCCGGGGTACATTTGTTATTAGACAGTTTTGAACCAATTCATGGTGTTCTTCTCTGTGAAGGAGAGGATATCGATCCTTCTCTGGACAACGATGAACTATCCGATCTCTCCGTACAAGAATTGGAAGAAATTAGGAGATTGCACGCTAGCGACACTGCAATTGACTAGGAAAAAGACACTATTGAACTCAGATTGGGTAAGCTCTGTCTAGAAAGGAACATTCCCTATTTGGGAATATGCAGGGGTTCACAAGTACTGAATGTTGCATGTGGGGGAACTCTTATACGAGACATTGGAAAAGAAATATCGAAAAACCTTCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E204396" ref_strand="+" ref_description="SGN-E204396 [cLEC-13-L1]">
      <seq>tcaactttgtgtgtctcattcttcgcctcttaaatagcactctctatctaaattttgattctcatctcttttagtatttgcattttagctactactcataagtagttgccaaaagaaaaaattaaagcaaaatttatcgtgctgccatggctgtcgaggaactctcggttgttctcccccgcgtgctcattgtctctagacgtaccgttcgtaagaacaaatttgatgattttgttggagaatatcatctcgatcttatagtaagctatggagctgttccggtgattgtacccagagtttccggggtacatttgttattagacagttttgaaccaattcatggtgttcttctctgtgaaggagaggatatcgatccttctctgtacaacgatgaactatccgatctctccgtagaagaattggaagaaattaggagattgcacgctagcgacactgcaattgacaaggaaaaagacacaattgaactcagattggctaagctctgtctagaaaggaacattccctatttgggaatatgcaagggttcacaggtactgaatgttgcatgtgggggaactcttatacaagacattgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0180C05.2" temp_strand="-" temp_description="C02HBa0180C05.2  AC215411.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0180C05 sequenced_by:kribb upload_account_name:korea">
        <position start="8100" stop="6825"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7800" g_stop="7564" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="237" r_length="237" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7563" i_stop="7484" i_length="80">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7483" g_stop="7125" g_length="359"/>
          <reference_exon_boundary r_type="cDNA" r_start="238" r_stop="596" r_length="359" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0180C05.2" gen_strand="-" ref_id="SGN-E204396" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>596</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0180C05.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E204396" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7800" e_stop="7564"/>
          <exon e_start="7483" e_stop="7125"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAACTTTGTGTGTCTCATTCTTCGCCTCTTAAATAGCACTCTCTATCTAAATTTTAATTCTCATCTCTTTTAGTATTTGCATTTTAGCTACTACTCATAAGTAGTTGCCAAAAGAAAAAATTAAAGCAAAATTTATCGTGCTGCCATGGCTGTCGAGGAACTCTCGGTTGTTCTCCCCCGCGTGCTCATTGTCTCTAGACGTACCGTTCGTAAGAACAAATTTGTTGATTTTGTTGGTACGTTATTTTTTTTTTCTTTCACATGATTATCAAAAAGATTGTAAAATTCTGAATTTCAGATTTTGATTAATTTTCAGGAGAATATCATCTCGATCTTATAGTAAGCTATGGAGCTGTTCCGGTGATTGTACCCAGAGTTTCCGGGGTACATTTGTTATTAGACAGTTTTGAACCAATTCATGGTGTTCTTCTCTGTGAAGGAGAGGATATCGATCCTTCTCTGTACAACGATGAACTATCCGATCTCTCCGTAGAAGAATTGGAAGAAATTAGGAGATTGCACGCTAGCGACACTGCAATTGACAAGGAAAAAGACACAATTGAACTCAGATTGGCTAAGCTCTGTCTAGAAAGGAACATTCCCTATTTGGGAATATGCAGGGGTTCACAGGTACTGAATGTTGCATGTGGGGGAACTCTTATACAAGACATTGGA</genome_strand>
        <mrna_strand>TCAACTTTGTGTGTCTCATTCTTCGCCTCTTAAATAGCACTCTCTATCTAAATTTTGATTCTCATCTCTTTTAGTATTTGCATTTTAGCTACTACTCATAAGTAGTTGCCAAAAGAAAAAATTAAAGCAAAATTTATCGTGCTGCCATGGCTGTCGAGGAACTCTCGGTTGTTCTCCCCCGCGTGCTCATTGTCTCTAGACGTACCGTTCGTAAGAACAAATTTGATGATTTTGTTG................................................................................GAGAATATCATCTCGATCTTATAGTAAGCTATGGAGCTGTTCCGGTGATTGTACCCAGAGTTTCCGGGGTACATTTGTTATTAGACAGTTTTGAACCAATTCATGGTGTTCTTCTCTGTGAAGGAGAGGATATCGATCCTTCTCTGTACAACGATGAACTATCCGATCTCTCCGTAGAAGAATTGGAAGAAATTAGGAGATTGCACGCTAGCGACACTGCAATTGACAAGGAAAAAGACACAATTGAACTCAGATTGGCTAAGCTCTGTCTAGAAAGGAACATTCCCTATTTGGGAATATGCAAGGGTTCACAGGTACTGAATGTTGCATGTGGGGGAACTCTTATACAAGACATTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E211850" ref_strand="+" ref_description="SGN-E211850 [cLEC-66-H20]">
      <seq>aactttgtgtgtctcattcttcgcctcttaaatagcactctctatctaaattttaattctcatctcttttagtatttgcattttagctactactcataagtagttgccaaaagaaaaaattaaagcaaaatttatcgtgctgccatggctgtcgaggaactctcggttgttctcccccgcgtgctcattgtctctagacgtaccgttcgtaagaacaaatttgttgattttgttggagaatatcatctcgatcttatagtaagctatggagctgttccggtgattgtacccagagtttccggggtacatttgttattagacagttttgaaccaattcatggtgttcttctctgtgaaggagaggatatcgatccttctctgtacaacgatgaactatccgatctctccgtagaagaattggaagaaattaggagattgcacgctagcgacactgcaattgacaaggaaaaagacacaattgaactcagattggctaagctctgtctagaaagggacattccctatttgggaatatgcangggttcacaggtactgaatgttgcatgtgggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0180C05.2" temp_strand="-" temp_description="C02HBa0180C05.2  AC215411.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0180C05 sequenced_by:kribb upload_account_name:korea">
        <position start="8098" stop="6848"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7798" g_stop="7564" g_length="235"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="235" r_length="235" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7563" i_stop="7484" i_length="80">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7483" g_stop="7148" g_length="336"/>
          <reference_exon_boundary r_type="cDNA" r_start="236" r_stop="571" r_length="336" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0180C05.2" gen_strand="-" ref_id="SGN-E211850" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>571</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0180C05.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E211850" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7798" e_stop="7564"/>
          <exon e_start="7483" e_stop="7148"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACTTTGTGTGTCTCATTCTTCGCCTCTTAAATAGCACTCTCTATCTAAATTTTAATTCTCATCTCTTTTAGTATTTGCATTTTAGCTACTACTCATAAGTAGTTGCCAAAAGAAAAAATTAAAGCAAAATTTATCGTGCTGCCATGGCTGTCGAGGAACTCTCGGTTGTTCTCCCCCGCGTGCTCATTGTCTCTAGACGTACCGTTCGTAAGAACAAATTTGTTGATTTTGTTGGTACGTTATTTTTTTTTTCTTTCACATGATTATCAAAAAGATTGTAAAATTCTGAATTTCAGATTTTGATTAATTTTCAGGAGAATATCATCTCGATCTTATAGTAAGCTATGGAGCTGTTCCGGTGATTGTACCCAGAGTTTCCGGGGTACATTTGTTATTAGACAGTTTTGAACCAATTCATGGTGTTCTTCTCTGTGAAGGAGAGGATATCGATCCTTCTCTGTACAACGATGAACTATCCGATCTCTCCGTAGAAGAATTGGAAGAAATTAGGAGATTGCACGCTAGCGACACTGCAATTGACAAGGAAAAAGACACAATTGAACTCAGATTGGCTAAGCTCTGTCTAGAAAGGAACATTCCCTATTTGGGAATATGCAGGGGTTCACAGGTACTGAATGTTGCATGTGGGG</genome_strand>
        <mrna_strand>AACTTTGTGTGTCTCATTCTTCGCCTCTTAAATAGCACTCTCTATCTAAATTTTAATTCTCATCTCTTTTAGTATTTGCATTTTAGCTACTACTCATAAGTAGTTGCCAAAAGAAAAAATTAAAGCAAAATTTATCGTGCTGCCATGGCTGTCGAGGAACTCTCGGTTGTTCTCCCCCGCGTGCTCATTGTCTCTAGACGTACCGTTCGTAAGAACAAATTTGTTGATTTTGTTG................................................................................GAGAATATCATCTCGATCTTATAGTAAGCTATGGAGCTGTTCCGGTGATTGTACCCAGAGTTTCCGGGGTACATTTGTTATTAGACAGTTTTGAACCAATTCATGGTGTTCTTCTCTGTGAAGGAGAGGATATCGATCCTTCTCTGTACAACGATGAACTATCCGATCTCTCCGTAGAAGAATTGGAAGAAATTAGGAGATTGCACGCTAGCGACACTGCAATTGACAAGGAAAAAGACACAATTGAACTCAGATTGGCTAAGCTCTGTCTAGAAAGGGACATTCCCTATTTGGGAATATGCANGGGTTCACAGGTACTGAATGTTGCATGTGGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E271837" ref_strand="+" ref_description="SGN-E271837 [cLEM-8-O18]">
      <seq>tatctaaattttaattctcatctctttgagagtttgcatgttagctactagtcataactagttgccaaaagaaaaaattaaagcaaaatttatcgtgctgccatggctgtcgaggaactctcggttgttctcccccgcgtgctcattgtctctagacgtaccgttcgtaagaacaaatttgttgattttgttggagaatatcatctcgatcttatagtaagctatggagctgttccggtgattgtacccagagtttccggggtacatttgttattagacagttttgaaccaattcatggtgttcttctctgtgaaggagaggatatcgatccttctctgtacaacgatgaactatccgatctctccgtagaagaattggaagaaattaggagattgcacgctagcgacactggcattgacaaggaaaaagacacaattgaactcagattggctaagctct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0180C05.2" temp_strand="-" temp_description="C02HBa0180C05.2  AC215411.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0180C05 sequenced_by:kribb upload_account_name:korea">
        <position start="8056" stop="6917"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7756" g_stop="7564" g_length="193"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="193" r_length="193" r_score="0.969"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7563" i_stop="7484" i_length="80">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7483" g_stop="7217" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="194" r_stop="460" r_length="267" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0180C05.2" gen_strand="-" ref_id="SGN-E271837" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>460</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0180C05.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E271837" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7756" e_stop="7564"/>
          <exon e_start="7483" e_stop="7217"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATCTAAATTTTAATTCTCATCTCTTTTAGTATTTGCATTTTAGCTACTACTCATAAGTAGTTGCCAAAAGAAAAAATTAAAGCAAAATTTATCGTGCTGCCATGGCTGTCGAGGAACTCTCGGTTGTTCTCCCCCGCGTGCTCATTGTCTCTAGACGTACCGTTCGTAAGAACAAATTTGTTGATTTTGTTGGTACGTTATTTTTTTTTTCTTTCACATGATTATCAAAAAGATTGTAAAATTCTGAATTTCAGATTTTGATTAATTTTCAGGAGAATATCATCTCGATCTTATAGTAAGCTATGGAGCTGTTCCGGTGATTGTACCCAGAGTTTCCGGGGTACATTTGTTATTAGACAGTTTTGAACCAATTCATGGTGTTCTTCTCTGTGAAGGAGAGGATATCGATCCTTCTCTGTACAACGATGAACTATCCGATCTCTCCGTAGAAGAATTGGAAGAAATTAGGAGATTGCACGCTAGCGACACTGCAATTGACAAGGAAAAAGACACAATTGAACTCAGATTGGCTAAGCTCT</genome_strand>
        <mrna_strand>TATCTAAATTTTAATTCTCATCTCTTTGAGAGTTTGCATGTTAGCTACTAGTCATAACTAGTTGCCAAAAGAAAAAATTAAAGCAAAATTTATCGTGCTGCCATGGCTGTCGAGGAACTCTCGGTTGTTCTCCCCCGCGTGCTCATTGTCTCTAGACGTACCGTTCGTAAGAACAAATTTGTTGATTTTGTTG................................................................................GAGAATATCATCTCGATCTTATAGTAAGCTATGGAGCTGTTCCGGTGATTGTACCCAGAGTTTCCGGGGTACATTTGTTATTAGACAGTTTTGAACCAATTCATGGTGTTCTTCTCTGTGAAGGAGAGGATATCGATCCTTCTCTGTACAACGATGAACTATCCGATCTCTCCGTAGAAGAATTGGAAGAAATTAGGAGATTGCACGCTAGCGACACTGGCATTGACAAGGAAAAAGACACAATTGAACTCAGATTGGCTAAGCTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E247991" ref_strand="+" ref_description="SGN-E247991 [cLEF-47-I17]">
      <seq>tcaactttgtgtgtctcattcttcgcctcttaaagagcacgctctatctaaattttaattctcatctcttttagtatttgcattttagctactactcataagtagttgccaaaagaaaaaattaaagcaaaatttatcgtgctgccatggctgtcgaggaactctcggttgttctcccccgcgtgctcattgtctctagacgtaccgttcgtaagaacaaatttgttgattttgttggagaatatcatctcgatcttatagtaagctatggagctgttccggtgattgtacccagagtttccggggtacatttgttattagacagttttgaaccaattcatggtgttcttctctgtgaaggagaggatatcgatccttctctgtacaacgatgaactatccgatctctccgtagaagaattggaagaaattaggagattgcacgctagcgacactgcaattgacaaggaaaaagacacaattgaactc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0180C05.2" temp_strand="-" temp_description="C02HBa0180C05.2  AC215411.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0180C05 sequenced_by:kribb upload_account_name:korea">
        <position start="8100" stop="6933"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7800" g_stop="7564" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="237" r_length="237" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7563" i_stop="7484" i_length="80">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7483" g_stop="7233" g_length="251"/>
          <reference_exon_boundary r_type="cDNA" r_start="238" r_stop="488" r_length="251" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0180C05.2" gen_strand="-" ref_id="SGN-E247991" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>488</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0180C05.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E247991" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7800" e_stop="7564"/>
          <exon e_start="7483" e_stop="7233"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAACTTTGTGTGTCTCATTCTTCGCCTCTTAAATAGCACTCTCTATCTAAATTTTAATTCTCATCTCTTTTAGTATTTGCATTTTAGCTACTACTCATAAGTAGTTGCCAAAAGAAAAAATTAAAGCAAAATTTATCGTGCTGCCATGGCTGTCGAGGAACTCTCGGTTGTTCTCCCCCGCGTGCTCATTGTCTCTAGACGTACCGTTCGTAAGAACAAATTTGTTGATTTTGTTGGTACGTTATTTTTTTTTTCTTTCACATGATTATCAAAAAGATTGTAAAATTCTGAATTTCAGATTTTGATTAATTTTCAGGAGAATATCATCTCGATCTTATAGTAAGCTATGGAGCTGTTCCGGTGATTGTACCCAGAGTTTCCGGGGTACATTTGTTATTAGACAGTTTTGAACCAATTCATGGTGTTCTTCTCTGTGAAGGAGAGGATATCGATCCTTCTCTGTACAACGATGAACTATCCGATCTCTCCGTAGAAGAATTGGAAGAAATTAGGAGATTGCACGCTAGCGACACTGCAATTGACAAGGAAAAAGACACAATTGAACTC</genome_strand>
        <mrna_strand>TCAACTTTGTGTGTCTCATTCTTCGCCTCTTAAAGAGCACGCTCTATCTAAATTTTAATTCTCATCTCTTTTAGTATTTGCATTTTAGCTACTACTCATAAGTAGTTGCCAAAAGAAAAAATTAAAGCAAAATTTATCGTGCTGCCATGGCTGTCGAGGAACTCTCGGTTGTTCTCCCCCGCGTGCTCATTGTCTCTAGACGTACCGTTCGTAAGAACAAATTTGTTGATTTTGTTG................................................................................GAGAATATCATCTCGATCTTATAGTAAGCTATGGAGCTGTTCCGGTGATTGTACCCAGAGTTTCCGGGGTACATTTGTTATTAGACAGTTTTGAACCAATTCATGGTGTTCTTCTCTGTGAAGGAGAGGATATCGATCCTTCTCTGTACAACGATGAACTATCCGATCTCTCCGTAGAAGAATTGGAAGAAATTAGGAGATTGCACGCTAGCGACACTGCAATTGACAAGGAAAAAGACACAATTGAACTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E723174" ref_strand="+" ref_description="SGN-E723174 [FC19CF05]">
      <seq>atcacttccattacattacttaaaaaatttctcttataatttaaattgtataatgaaaatgactaaggtttgttcttttgtggcagtaatgttggtgatgatccttgtttgtgatcaatttggggctaacgaggcggcgacatgcagcgcctcgcagctgagcccgtgtttgggtgcgatccagggtgggaccgcaccatcacaggattgttgtgctaggcttaagaaccagcagccttgcatttgtggatttatgaaggatcctaatttgaggcaatatgttaattctccaaatgctaggaaagttgctggacaatgtggtgtaagcattcctagttgttaattaggtttacaacattttacttgttgtatacatatgggtcttatgtattatggaaaaaaatatatatatgtaagactttaaataaaaaatggttgtaatctgtgttcaagtgtgttatgatgaatgaatcttgtggcttttgattttatttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0180C05.2" temp_strand="-" temp_description="C02HBa0180C05.2  AC215411.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0180C05 sequenced_by:kribb upload_account_name:korea">
        <position start="14687" stop="13594"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14387" g_stop="13894" g_length="494"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="494" r_length="494" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="495" polyA_stop="541"/>
      <MATCH_line gen_id="C02HBa0180C05.2" gen_strand="-" ref_id="SGN-E723174" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>494</cumulative_length_of_scored_exons>
        <coverage percentage="0.913" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0180C05.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E723174" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14387" e_stop="13894"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCACTTCCATTACATTACTTAAAAAATTTCTCTTATAATTTAAATTGTATAATGAAAATGACTAAGGTTTGTTCTTTTGTGGCAGTAATGTTGGTGATGATCCTTGTTTGTGATCAATTTGGGGCTAACGAGGCGGCGACATGCAGCGCCTCGCAGCTGAGCCCGTGTTTGGGTGCGATCCAGGGTGGGACCGCACCATCACAGGATTGTTGTGCTAGGCTTAAGAACCAGCAGCCTTGCATTTGTGGATTTATGAAGGATCCTAATTTGAGGCAATATGTTAATTCTCCAAATGCTAGGAAAGTTGCTGGACAATGTGGTGTAAGCATTCCTAGTTGTTAATTAGGTTTACAACATTTTACTTGTTGTATACATATGGGTCTTATGTATTATGGAAAAAAATATATATATGTAAGACTTTAAATAAAAAATGGTTGTAATCTGTGTTCAAGTGTGTTATGATGAATGAATCTTGTGGCTTTTGATTTTATTT</genome_strand>
        <mrna_strand>ATCACTTCCATTACATTACTTAAAAAATTTCTCTTATAATTTAAATTGTATAATGAAAATGACTAAGGTTTGTTCTTTTGTGGCAGTAATGTTGGTGATGATCCTTGTTTGTGATCAATTTGGGGCTAACGAGGCGGCGACATGCAGCGCCTCGCAGCTGAGCCCGTGTTTGGGTGCGATCCAGGGTGGGACCGCACCATCACAGGATTGTTGTGCTAGGCTTAAGAACCAGCAGCCTTGCATTTGTGGATTTATGAAGGATCCTAATTTGAGGCAATATGTTAATTCTCCAAATGCTAGGAAAGTTGCTGGACAATGTGGTGTAAGCATTCCTAGTTGTTAATTAGGTTTACAACATTTTACTTGTTGTATACATATGGGTCTTATGTATTATGGAAAAAAATATATATATGTAAGACTTTAAATAAAAAATGGTTGTAATCTGTGTTCAAGTGTGTTATGATGAATGAATCTTGTGGCTTTTGATTTTATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E723701" ref_strand="+" ref_description="SGN-E723701 [FC21BF08]">
      <seq>tcacttccattacattacttaaaaaatttctcttataatttaaattgtataatgaaaatgactaaggtttgttcttttgtggcagtaatgttggtgatgatccttgtttgtgatcaatttggggctaacgaggcggcgacatgcagcgcctcgcagctgagcccgtgtttgggtgcgatccagggtgggaccgcaccatcacaggattgttgtgctaggcttaaaaaccagcagccttgcatttgtggatttatgaaggatcctaatttgaggcaatatgttaattctccaaatgctaggaaagttgctggacaatgtggtgtaagcattcctagttgttaattaggtttacaacattttacttgttgtatacatatgggtcttatgtattatggaaaaaaatatatatatgtaagactttaaataaaaaatggttgtaatctgtgttcaagtgtgttatgatgaatgaatcttgtggcttttgattttaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0180C05.2" temp_strand="-" temp_description="C02HBa0180C05.2  AC215411.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0180C05 sequenced_by:kribb upload_account_name:korea">
        <position start="14686" stop="13597"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14386" g_stop="13894" g_length="493"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="493" r_length="493" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0180C05.2" gen_strand="-" ref_id="SGN-E723701" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>493</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0180C05.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E723701" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14386" e_stop="13894"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCACTTCCATTACATTACTTAAAAAATTTCTCTTATAATTTAAATTGTATAATGAAAATGACTAAGGTTTGTTCTTTTGTGGCAGTAATGTTGGTGATGATCCTTGTTTGTGATCAATTTGGGGCTAACGAGGCGGCGACATGCAGCGCCTCGCAGCTGAGCCCGTGTTTGGGTGCGATCCAGGGTGGGACCGCACCATCACAGGATTGTTGTGCTAGGCTTAAGAACCAGCAGCCTTGCATTTGTGGATTTATGAAGGATCCTAATTTGAGGCAATATGTTAATTCTCCAAATGCTAGGAAAGTTGCTGGACAATGTGGTGTAAGCATTCCTAGTTGTTAATTAGGTTTACAACATTTTACTTGTTGTATACATATGGGTCTTATGTATTATGGAAAAAAATATATATATGTAAGACTTTAAATAAAAAATGGTTGTAATCTGTGTTCAAGTGTGTTATGATGAATGAATCTTGTGGCTTTTGATTTTATTT</genome_strand>
        <mrna_strand>TCACTTCCATTACATTACTTAAAAAATTTCTCTTATAATTTAAATTGTATAATGAAAATGACTAAGGTTTGTTCTTTTGTGGCAGTAATGTTGGTGATGATCCTTGTTTGTGATCAATTTGGGGCTAACGAGGCGGCGACATGCAGCGCCTCGCAGCTGAGCCCGTGTTTGGGTGCGATCCAGGGTGGGACCGCACCATCACAGGATTGTTGTGCTAGGCTTAAAAACCAGCAGCCTTGCATTTGTGGATTTATGAAGGATCCTAATTTGAGGCAATATGTTAATTCTCCAAATGCTAGGAAAGTTGCTGGACAATGTGGTGTAAGCATTCCTAGTTGTTAATTAGGTTTACAACATTTTACTTGTTGTATACATATGGGTCTTATGTATTATGGAAAAAAATATATATATGTAAGACTTTAAATAAAAAATGGTTGTAATCTGTGTTCAAGTGTGTTATGATGAATGAATCTTGTGGCTTTTGATTTTAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E723016" ref_strand="+" ref_description="SGN-E723016 [FC19AC10]">
      <seq>tcggccgaattgatccatcacttccatcactttacttaaaaaatttctcttataatttaaattgtataatgaaaatgactaaggtttgttcttttgtggcagtaatgttggtgatgatccttgtttgtgatcaatttggggctaacgaggcggcgacatgcagcgcctcgcagctgagcccgtgtttgggtgcgatccagggtgggaccgcaccatcacaggattgttgtgctaggcttaaaaaccagcagccttgcatttgtggatttatgaaggatcctaatttgaggcaatatgttaattctccaaatgctaggaaagttgctggacaatgtggtgtaagcattcctagttgttaattaggtttacaacattttacttgttgtatacatatgggtcttatgtattatggaaaaaaatatatatatgtaagactttaaataaaaaatggttgtaatctgtgttcaagtgtgttatgatgaatgaatcttgtggcttttgattttatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0180C05.2" temp_strand="-" temp_description="C02HBa0180C05.2  AC215411.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0180C05 sequenced_by:kribb upload_account_name:korea">
        <position start="14698" stop="13595"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14403" g_stop="13895" g_length="509"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="509" r_length="509" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0180C05.2" gen_strand="-" ref_id="SGN-E723016" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>509</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0180C05.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E723016" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14403" e_stop="13895"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCACTACTTCATCCATCACTTCCATTACATTACTTAAAAAATTTCTCTTATAATTTAAATTGTATAATGAAAATGACTAAGGTTTGTTCTTTTGTGGCAGTAATGTTGGTGATGATCCTTGTTTGTGATCAATTTGGGGCTAACGAGGCGGCGACATGCAGCGCCTCGCAGCTGAGCCCGTGTTTGGGTGCGATCCAGGGTGGGACCGCACCATCACAGGATTGTTGTGCTAGGCTTAAGAACCAGCAGCCTTGCATTTGTGGATTTATGAAGGATCCTAATTTGAGGCAATATGTTAATTCTCCAAATGCTAGGAAAGTTGCTGGACAATGTGGTGTAAGCATTCCTAGTTGTTAATTAGGTTTACAACATTTTACTTGTTGTATACATATGGGTCTTATGTATTATGGAAAAAAATATATATATGTAAGACTTTAAATAAAAAATGGTTGTAATCTGTGTTCAAGTGTGTTATGATGAATGAATCTTGTGGCTTTTGATTTTATT</genome_strand>
        <mrna_strand>TCGGCCGAATTGATCCATCACTTCCATCACTTTACTTAAAAAATTTCTCTTATAATTTAAATTGTATAATGAAAATGACTAAGGTTTGTTCTTTTGTGGCAGTAATGTTGGTGATGATCCTTGTTTGTGATCAATTTGGGGCTAACGAGGCGGCGACATGCAGCGCCTCGCAGCTGAGCCCGTGTTTGGGTGCGATCCAGGGTGGGACCGCACCATCACAGGATTGTTGTGCTAGGCTTAAAAACCAGCAGCCTTGCATTTGTGGATTTATGAAGGATCCTAATTTGAGGCAATATGTTAATTCTCCAAATGCTAGGAAAGTTGCTGGACAATGTGGTGTAAGCATTCCTAGTTGTTAATTAGGTTTACAACATTTTACTTGTTGTATACATATGGGTCTTATGTATTATGGAAAAAAATATATATATGTAAGACTTTAAATAAAAAATGGTTGTAATCTGTGTTCAAGTGTGTTATGATGAATGAATCTTGTGGCTTTTGATTTTATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E718465" ref_strand="+" ref_description="SGN-E718465 [FC04DA07]">
      <seq>gggcgaatggcggccaatcggccgaattgatccatcacttccattacattacttaaaaaatttctcttataatttaaattgtataatgaaaatgactaaggtttgttcttttgtggcagtaatgttggtgatgatccttgtttgtgatcaatttggggctaacgaggcggcgacatgcagcgcctcgcagctgagcccgtgtttgggtgcgatccagggtgggaccgcaccatcacaggattgttgtgctaggcttaagaaccagcagccttgcatttgtggatttatgaaggatcctaatttgaggcaatatgttaattctccaaatgctaggaaagttgctggacaatgtggtgtaagcattcctagttgttaattaggtttacaacattttacttgttgtatacatatgggtcttatgtattatggaaaaaaatatatatatgtaagactttaaataaaaaatggttgtaatctgtgttcaagtgtgttatgatgaatgaatcttgtggcttttgattttaaaaaaaaaaaaaaaaaaaattccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0180C05.2" temp_strand="-" temp_description="C02HBa0180C05.2  AC215411.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0180C05 sequenced_by:kribb upload_account_name:korea">
        <position start="14698" stop="13597"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14394" g_stop="13898" g_length="497"/>
          <reference_exon_boundary r_type="cDNA" r_start="27" r_stop="523" r_length="497" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="524" polyA_stop="544"/>
      <MATCH_line gen_id="C02HBa0180C05.2" gen_strand="-" ref_id="SGN-E718465" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>497</cumulative_length_of_scored_exons>
        <coverage percentage="0.907" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0180C05.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E718465" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14394" e_stop="13898"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCATCCATCACTTCCATTACATTACTTAAAAAATTTCTCTTATAATTTAAATTGTATAATGAAAATGACTAAGGTTTGTTCTTTTGTGGCAGTAATGTTGGTGATGATCCTTGTTTGTGATCAATTTGGGGCTAACGAGGCGGCGACATGCAGCGCCTCGCAGCTGAGCCCGTGTTTGGGTGCGATCCAGGGTGGGACCGCACCATCACAGGATTGTTGTGCTAGGCTTAAGAACCAGCAGCCTTGCATTTGTGGATTTATGAAGGATCCTAATTTGAGGCAATATGTTAATTCTCCAAATGCTAGGAAAGTTGCTGGACAATGTGGTGTAAGCATTCCTAGTTGTTAATTAGGTTTACAACATTTTACTTGTTGTATACATATGGGTCTTATGTATTATGGAAAAAAATATATATATGTAAGACTTTAAATAAAAAATGGTTGTAATCTGTGTTCAAGTGTGTTATGATGAATGAATCTTGTGGCTTTTGATTTT</genome_strand>
        <mrna_strand>TTGATCCATCACTTCCATTACATTACTTAAAAAATTTCTCTTATAATTTAAATTGTATAATGAAAATGACTAAGGTTTGTTCTTTTGTGGCAGTAATGTTGGTGATGATCCTTGTTTGTGATCAATTTGGGGCTAACGAGGCGGCGACATGCAGCGCCTCGCAGCTGAGCCCGTGTTTGGGTGCGATCCAGGGTGGGACCGCACCATCACAGGATTGTTGTGCTAGGCTTAAGAACCAGCAGCCTTGCATTTGTGGATTTATGAAGGATCCTAATTTGAGGCAATATGTTAATTCTCCAAATGCTAGGAAAGTTGCTGGACAATGTGGTGTAAGCATTCCTAGTTGTTAATTAGGTTTACAACATTTTACTTGTTGTATACATATGGGTCTTATGTATTATGGAAAAAAATATATATATGTAAGACTTTAAATAAAAAATGGTTGTAATCTGTGTTCAAGTGTGTTATGATGAATGAATCTTGTGGCTTTTGATTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E721627" ref_strand="+" ref_description="SGN-E721627 [FC14CE12]">
      <seq>tgatccatcacttccaccccattacttaaaaaatttctcttataatttaaattgtataatgaaaatgactaaggtttgttcttttgtggcagtaatgttggtgatgatccttgtttgtgatcaatttggggctaacgaggcggcgacatgcagcgcctcgcagctgagcccgtgtttgggtgcgatccagggtgggaccgcaccatcacaggattgttgtgctaggcttaagaaccagcagccttgcatttgtggatttatgaaggatcctaatttgaggcaatatgttaattctccaaatgctaggaaagttgctggacaatgtggtgtaagcattcctagttgttaattaggtttacaacattttacttgttgtatacatatgggtcttatgtattatggaaaaaaatatatatatgtaagactttaaataaaaaatggttgtaatctgtgttcaagtgtgttatgatgaatgaatcttgtggcttttgattttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0180C05.2" temp_strand="-" temp_description="C02HBa0180C05.2  AC215411.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0180C05 sequenced_by:kribb upload_account_name:korea">
        <position start="14674" stop="13597"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14393" g_stop="13898" g_length="496"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="496" r_length="496" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="497" polyA_stop="531"/>
      <MATCH_line gen_id="C02HBa0180C05.2" gen_strand="-" ref_id="SGN-E721627" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>496</cumulative_length_of_scored_exons>
        <coverage percentage="0.934" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0180C05.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E721627" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14393" e_stop="13898"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATCCATCACTTCCATTACATTACTTAAAAAATTTCTCTTATAATTTAAATTGTATAATGAAAATGACTAAGGTTTGTTCTTTTGTGGCAGTAATGTTGGTGATGATCCTTGTTTGTGATCAATTTGGGGCTAACGAGGCGGCGACATGCAGCGCCTCGCAGCTGAGCCCGTGTTTGGGTGCGATCCAGGGTGGGACCGCACCATCACAGGATTGTTGTGCTAGGCTTAAGAACCAGCAGCCTTGCATTTGTGGATTTATGAAGGATCCTAATTTGAGGCAATATGTTAATTCTCCAAATGCTAGGAAAGTTGCTGGACAATGTGGTGTAAGCATTCCTAGTTGTTAATTAGGTTTACAACATTTTACTTGTTGTATACATATGGGTCTTATGTATTATGGAAAAAAATATATATATGTAAGACTTTAAATAAAAAATGGTTGTAATCTGTGTTCAAGTGTGTTATGATGAATGAATCTTGTGGCTTTTGATTTT</genome_strand>
        <mrna_strand>TGATCCATCACTTCCACCCCATTACTTAAAAAATTTCTCTTATAATTTAAATTGTATAATGAAAATGACTAAGGTTTGTTCTTTTGTGGCAGTAATGTTGGTGATGATCCTTGTTTGTGATCAATTTGGGGCTAACGAGGCGGCGACATGCAGCGCCTCGCAGCTGAGCCCGTGTTTGGGTGCGATCCAGGGTGGGACCGCACCATCACAGGATTGTTGTGCTAGGCTTAAGAACCAGCAGCCTTGCATTTGTGGATTTATGAAGGATCCTAATTTGAGGCAATATGTTAATTCTCCAAATGCTAGGAAAGTTGCTGGACAATGTGGTGTAAGCATTCCTAGTTGTTAATTAGGTTTACAACATTTTACTTGTTGTATACATATGGGTCTTATGTATTATGGAAAAAAATATATATATGTAAGACTTTAAATAAAAAATGGTTGTAATCTGTGTTCAAGTGTGTTATGATGAATGAATCTTGTGGCTTTTGATTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E717363" ref_strand="+" ref_description="SGN-E717363 [FC01AA07]">
      <seq>gatcacttccattacctcacttaaaaaatttctcttataatttaaattgtataatgaaaatgactaaggtttgttcttttgtggcagtaatgttggtgatgatccttgtttgtgatcaatttggggctaacgaggcggcgacatgcagcgcctcgcagctgagcccgtgtttgggtgcgatccagggtgggaccgcaccatcacaggattgttgtgctaggcttaagaaccagcagccttgcatttgtggatttatgaaggatcctaatttgaggcaatatgttaattctccaaatgctaggaaagttgctggacaatgtggtgtaagcattcctagttgttaattaggtttacaacattttacttgttgtatacatatgggtcttatgtattatggaaaaaaatatatatatgtaagactttaaataaaaaatggttgtaatctgtgttcaagtgtgttatgatgaatgaatcttgtggcttttgatttaaaaaaaaaaaaaaaaaaaaaaaaaagtccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0180C05.2" temp_strand="-" temp_description="C02HBa0180C05.2  AC215411.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0180C05 sequenced_by:kribb upload_account_name:korea">
        <position start="14687" stop="13597"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14388" g_stop="13898" g_length="491"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="491" r_length="491" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="492" polyA_stop="517"/>
      <MATCH_line gen_id="C02HBa0180C05.2" gen_strand="-" ref_id="SGN-E717363" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>491</cumulative_length_of_scored_exons>
        <coverage percentage="0.942" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0180C05.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E717363" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14388" e_stop="13898"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATCACTTCCATTACATTACTTAAAAAATTTCTCTTATAATTTAAATTGTATAATGAAAATGACTAAGGTTTGTTCTTTTGTGGCAGTAATGTTGGTGATGATCCTTGTTTGTGATCAATTTGGGGCTAACGAGGCGGCGACATGCAGCGCCTCGCAGCTGAGCCCGTGTTTGGGTGCGATCCAGGGTGGGACCGCACCATCACAGGATTGTTGTGCTAGGCTTAAGAACCAGCAGCCTTGCATTTGTGGATTTATGAAGGATCCTAATTTGAGGCAATATGTTAATTCTCCAAATGCTAGGAAAGTTGCTGGACAATGTGGTGTAAGCATTCCTAGTTGTTAATTAGGTTTACAACATTTTACTTGTTGTATACATATGGGTCTTATGTATTATGGAAAAAAATATATATATGTAAGACTTTAAATAAAAAATGGTTGTAATCTGTGTTCAAGTGTGTTATGATGAATGAATCTTGTGGCTTTTGATTTT</genome_strand>
        <mrna_strand>GATCACTTCCATTACCTCACTTAAAAAATTTCTCTTATAATTTAAATTGTATAATGAAAATGACTAAGGTTTGTTCTTTTGTGGCAGTAATGTTGGTGATGATCCTTGTTTGTGATCAATTTGGGGCTAACGAGGCGGCGACATGCAGCGCCTCGCAGCTGAGCCCGTGTTTGGGTGCGATCCAGGGTGGGACCGCACCATCACAGGATTGTTGTGCTAGGCTTAAGAACCAGCAGCCTTGCATTTGTGGATTTATGAAGGATCCTAATTTGAGGCAATATGTTAATTCTCCAAATGCTAGGAAAGTTGCTGGACAATGTGGTGTAAGCATTCCTAGTTGTTAATTAGGTTTACAACATTTTACTTGTTGTATACATATGGGTCTTATGTATTATGGAAAAAAATATATATATGTAAGACTTTAAATAAAAAATGGTTGTAATCTGTGTTCAAGTGTGTTATGATGAATGAATCTTGTGGCTTTTGATTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E723455" ref_strand="+" ref_description="SGN-E723455 [FC20CB07]">
      <seq>tccattacattacttaaaaaatttctcttataatttaaattgtataatgaaaatgactaaggtttgttcttttgtggcagtaatgttggtgatgatccttgtttgtgatcaatttggggctaacgaggcggcgacatgcagcgcctcgcagctgagcccgtgtttgggtgcgatccagggtgggaccgcaccatcacaggattgttgtgctaggcttaagaaccagcagccttgcatttgtggatttatgaaggatcctaatttgaggcaatatgttaattctccaaatgctaggaaagttgctggacaatgtggtgtaagcattcctagttgttaattaggtttacaacattttacttgttgtatacatatgggtcttatgtattatggaaaaaaatatatatatgtaagactttaaataaaaaatggttgtaatctgtgttcaagtgtgttatgatgaatgaatcttgtggcttttgattttaaaaaaaaaaaaaaaaaaacaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0180C05.2" temp_strand="-" temp_description="C02HBa0180C05.2  AC215411.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0180C05 sequenced_by:kribb upload_account_name:korea">
        <position start="14681" stop="13597"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14381" g_stop="13898" g_length="484"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="484" r_length="484" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="485" polyA_stop="520"/>
      <MATCH_line gen_id="C02HBa0180C05.2" gen_strand="-" ref_id="SGN-E723455" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>484</cumulative_length_of_scored_exons>
        <coverage percentage="0.931" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0180C05.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E723455" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14381" e_stop="13898"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCATTACATTACTTAAAAAATTTCTCTTATAATTTAAATTGTATAATGAAAATGACTAAGGTTTGTTCTTTTGTGGCAGTAATGTTGGTGATGATCCTTGTTTGTGATCAATTTGGGGCTAACGAGGCGGCGACATGCAGCGCCTCGCAGCTGAGCCCGTGTTTGGGTGCGATCCAGGGTGGGACCGCACCATCACAGGATTGTTGTGCTAGGCTTAAGAACCAGCAGCCTTGCATTTGTGGATTTATGAAGGATCCTAATTTGAGGCAATATGTTAATTCTCCAAATGCTAGGAAAGTTGCTGGACAATGTGGTGTAAGCATTCCTAGTTGTTAATTAGGTTTACAACATTTTACTTGTTGTATACATATGGGTCTTATGTATTATGGAAAAAAATATATATATGTAAGACTTTAAATAAAAAATGGTTGTAATCTGTGTTCAAGTGTGTTATGATGAATGAATCTTGTGGCTTTTGATTTT</genome_strand>
        <mrna_strand>TCCATTACATTACTTAAAAAATTTCTCTTATAATTTAAATTGTATAATGAAAATGACTAAGGTTTGTTCTTTTGTGGCAGTAATGTTGGTGATGATCCTTGTTTGTGATCAATTTGGGGCTAACGAGGCGGCGACATGCAGCGCCTCGCAGCTGAGCCCGTGTTTGGGTGCGATCCAGGGTGGGACCGCACCATCACAGGATTGTTGTGCTAGGCTTAAGAACCAGCAGCCTTGCATTTGTGGATTTATGAAGGATCCTAATTTGAGGCAATATGTTAATTCTCCAAATGCTAGGAAAGTTGCTGGACAATGTGGTGTAAGCATTCCTAGTTGTTAATTAGGTTTACAACATTTTACTTGTTGTATACATATGGGTCTTATGTATTATGGAAAAAAATATATATATGTAAGACTTTAAATAAAAAATGGTTGTAATCTGTGTTCAAGTGTGTTATGATGAATGAATCTTGTGGCTTTTGATTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E714551" ref_strand="+" ref_description="SGN-E714551 [FB11DA12]">
      <seq>ttacttaaaaaatttctcttataatttaaattgtataatgaaaatgactaaggtttgttcttttgtggcagtaatgttggtgatgatccttgtttgtgatcaatttggggctaacgaggcggcgacatgcagcgcctcgcagctgagcccgtgtttgggtgcgatccagggtgggaccgcaccatcacaggattgttgtgctaggcttaagaaccagcagccttgcatttgtggatttatgaaggatcctaatttgaggcaatatgttaattctccaaatgctaggaaagttgctggacaatgtggtgtaagcattcctagttgttaattaggtttacaacattttacttgttgtatacatatgggtcttatgtattatggaaaaaaatatatatatgtaagactttaaataaaaaatggttgtaatctgtgttcaagtgtgttatgatgaatgaatcttgtggcttttgattttaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0180C05.2" temp_strand="-" temp_description="C02HBa0180C05.2  AC215411.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0180C05 sequenced_by:kribb upload_account_name:korea">
        <position start="14672" stop="13597"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14372" g_stop="13898" g_length="475"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="475" r_length="475" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="476" polyA_stop="485"/>
      <MATCH_line gen_id="C02HBa0180C05.2" gen_strand="-" ref_id="SGN-E714551" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>475</cumulative_length_of_scored_exons>
        <coverage percentage="0.979" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0180C05.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E714551" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14372" e_stop="13898"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTACTTAAAAAATTTCTCTTATAATTTAAATTGTATAATGAAAATGACTAAGGTTTGTTCTTTTGTGGCAGTAATGTTGGTGATGATCCTTGTTTGTGATCAATTTGGGGCTAACGAGGCGGCGACATGCAGCGCCTCGCAGCTGAGCCCGTGTTTGGGTGCGATCCAGGGTGGGACCGCACCATCACAGGATTGTTGTGCTAGGCTTAAGAACCAGCAGCCTTGCATTTGTGGATTTATGAAGGATCCTAATTTGAGGCAATATGTTAATTCTCCAAATGCTAGGAAAGTTGCTGGACAATGTGGTGTAAGCATTCCTAGTTGTTAATTAGGTTTACAACATTTTACTTGTTGTATACATATGGGTCTTATGTATTATGGAAAAAAATATATATATGTAAGACTTTAAATAAAAAATGGTTGTAATCTGTGTTCAAGTGTGTTATGATGAATGAATCTTGTGGCTTTTGATTTT</genome_strand>
        <mrna_strand>TTACTTAAAAAATTTCTCTTATAATTTAAATTGTATAATGAAAATGACTAAGGTTTGTTCTTTTGTGGCAGTAATGTTGGTGATGATCCTTGTTTGTGATCAATTTGGGGCTAACGAGGCGGCGACATGCAGCGCCTCGCAGCTGAGCCCGTGTTTGGGTGCGATCCAGGGTGGGACCGCACCATCACAGGATTGTTGTGCTAGGCTTAAGAACCAGCAGCCTTGCATTTGTGGATTTATGAAGGATCCTAATTTGAGGCAATATGTTAATTCTCCAAATGCTAGGAAAGTTGCTGGACAATGTGGTGTAAGCATTCCTAGTTGTTAATTAGGTTTACAACATTTTACTTGTTGTATACATATGGGTCTTATGTATTATGGAAAAAAATATATATATGTAAGACTTTAAATAAAAAATGGTTGTAATCTGTGTTCAAGTGTGTTATGATGAATGAATCTTGTGGCTTTTGATTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E716483" ref_strand="+" ref_description="SGN-E716483 [FB17AG01]">
      <seq>cattacttaaaaaatttctcttataatttaaattgtataatgaaaatgactaaggtttgttcttttgtggcagtaatgttggtgatgatccttgtttgtgatcaatttggggctaacgaggcggcgacatgcagcgcctcgcagctgagcccgtgtttgggtgcgatccagggtgggaccgcaccatcacaggattgttgtgctaggcttaagaaccagcagccttgcatttgtggatttatgaaggatcctaatttgaggcaatatgttaattctccaaatgctaggaaagttgctggacaatgtggtgtaagcattcctagttgttaattaggtttacaacattttacttgttgtatacatatgggtcttatgtattatggaaaaaaatatatatatgtaagactttaaataaaaaatggttgtaatctgtgttcaagtgtgttatgatgaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0180C05.2" temp_strand="-" temp_description="C02HBa0180C05.2  AC215411.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0180C05 sequenced_by:kribb upload_account_name:korea">
        <position start="14674" stop="13617"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14374" g_stop="13922" g_length="453"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="453" r_length="453" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="454" polyA_stop="467"/>
      <MATCH_line gen_id="C02HBa0180C05.2" gen_strand="-" ref_id="SGN-E716483" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>453</cumulative_length_of_scored_exons>
        <coverage percentage="0.970" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0180C05.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E716483" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14374" e_stop="13922"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATTACTTAAAAAATTTCTCTTATAATTTAAATTGTATAATGAAAATGACTAAGGTTTGTTCTTTTGTGGCAGTAATGTTGGTGATGATCCTTGTTTGTGATCAATTTGGGGCTAACGAGGCGGCGACATGCAGCGCCTCGCAGCTGAGCCCGTGTTTGGGTGCGATCCAGGGTGGGACCGCACCATCACAGGATTGTTGTGCTAGGCTTAAGAACCAGCAGCCTTGCATTTGTGGATTTATGAAGGATCCTAATTTGAGGCAATATGTTAATTCTCCAAATGCTAGGAAAGTTGCTGGACAATGTGGTGTAAGCATTCCTAGTTGTTAATTAGGTTTACAACATTTTACTTGTTGTATACATATGGGTCTTATGTATTATGGAAAAAAATATATATATGTAAGACTTTAAATAAAAAATGGTTGTAATCTGTGTTCAAGTGTGTTATGATGA</genome_strand>
        <mrna_strand>CATTACTTAAAAAATTTCTCTTATAATTTAAATTGTATAATGAAAATGACTAAGGTTTGTTCTTTTGTGGCAGTAATGTTGGTGATGATCCTTGTTTGTGATCAATTTGGGGCTAACGAGGCGGCGACATGCAGCGCCTCGCAGCTGAGCCCGTGTTTGGGTGCGATCCAGGGTGGGACCGCACCATCACAGGATTGTTGTGCTAGGCTTAAGAACCAGCAGCCTTGCATTTGTGGATTTATGAAGGATCCTAATTTGAGGCAATATGTTAATTCTCCAAATGCTAGGAAAGTTGCTGGACAATGTGGTGTAAGCATTCCTAGTTGTTAATTAGGTTTACAACATTTTACTTGTTGTATACATATGGGTCTTATGTATTATGGAAAAAAATATATATATGTAAGACTTTAAATAAAAAATGGTTGTAATCTGTGTTCAAGTGTGTTATGATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E721305" ref_strand="+" ref_description="SGN-E721305 [FC13BG04]">
      <seq>cggccgaattgatccatcacttccattacattacttaaaaaatttctcttataatttaaattgtataatgaaaatgactaaggtttgttcttttgtggcagtaatgttggtgatgatccttgtttgtgatcaatttggggctaacgaggcggcgacatgcagcgcctcgcagctgagcccgtgtttgggtgcgatccagggtgggaccgcaccatcacaggattgttgtgctaggcttaaaaaccagcagccttgcatttgtggatttatgaaggatcctaatttgaggcaatatgttaattctccaaatgctaggaaagttgctggacaatgtggtgtaagcattcctagttgttaattaggtttacaacattttacttgttgtatacatatgggtcttatgtattatggaaaaaaatatatatatgtaagactttaaataaaaaatggttgtaatctgaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0180C05.2" temp_strand="-" temp_description="C02HBa0180C05.2  AC215411.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0180C05 sequenced_by:kribb upload_account_name:korea">
        <position start="14698" stop="13643"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14402" g_stop="13944" g_length="459"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="459" r_length="459" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="461" polyA_stop="509"/>
      <MATCH_line gen_id="C02HBa0180C05.2" gen_strand="-" ref_id="SGN-E721305" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>459</cumulative_length_of_scored_exons>
        <coverage percentage="0.902" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0180C05.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E721305" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14402" e_stop="13944"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCACTACTTCATCCATCACTTCCATTACATTACTTAAAAAATTTCTCTTATAATTTAAATTGTATAATGAAAATGACTAAGGTTTGTTCTTTTGTGGCAGTAATGTTGGTGATGATCCTTGTTTGTGATCAATTTGGGGCTAACGAGGCGGCGACATGCAGCGCCTCGCAGCTGAGCCCGTGTTTGGGTGCGATCCAGGGTGGGACCGCACCATCACAGGATTGTTGTGCTAGGCTTAAGAACCAGCAGCCTTGCATTTGTGGATTTATGAAGGATCCTAATTTGAGGCAATATGTTAATTCTCCAAATGCTAGGAAAGTTGCTGGACAATGTGGTGTAAGCATTCCTAGTTGTTAATTAGGTTTACAACATTTTACTTGTTGTATACATATGGGTCTTATGTATTATGGAAAAAAATATATATATGTAAGACTTTAAATAAAAAATGGTTGTAATCT</genome_strand>
        <mrna_strand>CGGCCGAATTGATCCATCACTTCCATTACATTACTTAAAAAATTTCTCTTATAATTTAAATTGTATAATGAAAATGACTAAGGTTTGTTCTTTTGTGGCAGTAATGTTGGTGATGATCCTTGTTTGTGATCAATTTGGGGCTAACGAGGCGGCGACATGCAGCGCCTCGCAGCTGAGCCCGTGTTTGGGTGCGATCCAGGGTGGGACCGCACCATCACAGGATTGTTGTGCTAGGCTTAAAAACCAGCAGCCTTGCATTTGTGGATTTATGAAGGATCCTAATTTGAGGCAATATGTTAATTCTCCAAATGCTAGGAAAGTTGCTGGACAATGTGGTGTAAGCATTCCTAGTTGTTAATTAGGTTTACAACATTTTACTTGTTGTATACATATGGGTCTTATGTATTATGGAAAAAAATATATATATGTAAGACTTTAAATAAAAAATGGTTGTAATCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E716185" ref_strand="+" ref_description="SGN-E716185 [FB16BD09]">
      <seq>attacttaaaaaatttctcttataatttaaattgtataatgaaaatgactaaggtttgttcttttgtggcagtaatgttggtgatgatccttgtttgtgatcaatttggggctaacgaggcggcgacatgcagcgcctcgcagctgagcccgtgtttgggtgcgatccagggtgggaccgcaccatcacaggattgttgtgctaggcttaagaaccagcagccttgcatttgtggatttatgaaggatcctaatttgaggcaatatgttaattctccaaatgctaggaaagttgctggacaatgtggtgtaagcattcctagttgttaattaggtttacaacattttacttgttgtatacatatgggtcttatgtattatggaaaaaaatatatatatgtaagactttaaataaaaaatggttgtaatctgaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0180C05.2" temp_strand="-" temp_description="C02HBa0180C05.2  AC215411.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0180C05 sequenced_by:kribb upload_account_name:korea">
        <position start="14673" stop="13643"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14373" g_stop="13944" g_length="430"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="430" r_length="430" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="432" polyA_stop="443"/>
      <MATCH_line gen_id="C02HBa0180C05.2" gen_strand="-" ref_id="SGN-E716185" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>430</cumulative_length_of_scored_exons>
        <coverage percentage="0.971" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0180C05.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E716185" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14373" e_stop="13944"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTACTTAAAAAATTTCTCTTATAATTTAAATTGTATAATGAAAATGACTAAGGTTTGTTCTTTTGTGGCAGTAATGTTGGTGATGATCCTTGTTTGTGATCAATTTGGGGCTAACGAGGCGGCGACATGCAGCGCCTCGCAGCTGAGCCCGTGTTTGGGTGCGATCCAGGGTGGGACCGCACCATCACAGGATTGTTGTGCTAGGCTTAAGAACCAGCAGCCTTGCATTTGTGGATTTATGAAGGATCCTAATTTGAGGCAATATGTTAATTCTCCAAATGCTAGGAAAGTTGCTGGACAATGTGGTGTAAGCATTCCTAGTTGTTAATTAGGTTTACAACATTTTACTTGTTGTATACATATGGGTCTTATGTATTATGGAAAAAAATATATATATGTAAGACTTTAAATAAAAAATGGTTGTAATCT</genome_strand>
        <mrna_strand>ATTACTTAAAAAATTTCTCTTATAATTTAAATTGTATAATGAAAATGACTAAGGTTTGTTCTTTTGTGGCAGTAATGTTGGTGATGATCCTTGTTTGTGATCAATTTGGGGCTAACGAGGCGGCGACATGCAGCGCCTCGCAGCTGAGCCCGTGTTTGGGTGCGATCCAGGGTGGGACCGCACCATCACAGGATTGTTGTGCTAGGCTTAAGAACCAGCAGCCTTGCATTTGTGGATTTATGAAGGATCCTAATTTGAGGCAATATGTTAATTCTCCAAATGCTAGGAAAGTTGCTGGACAATGTGGTGTAAGCATTCCTAGTTGTTAATTAGGTTTACAACATTTTACTTGTTGTATACATATGGGTCTTATGTATTATGGAAAAAAATATATATATGTAAGACTTTAAATAAAAAATGGTTGTAATCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E396922" ref_strand="+" ref_description="SGN-E396922 [TUS-44-D1]">
      <seq>tgcgatccagggtgggaccgcaccatcacaggattgttgtgctaggcttaagaaccagcagccttgcatttgtggatttatgaaggatcctaatttgaggcaatatgttaattctccaaatgctaggaaagttgctggacaatgtggtgtaagcattcctagttgttaattaggtttacaacattttacttgttgtatacatatgggtcttatgtattatggaaaaaaatatatatatgtaagactttaaataaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0180C05.2" temp_strand="-" temp_description="C02HBa0180C05.2  AC215411.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0180C05 sequenced_by:kribb upload_account_name:korea">
        <position start="14513" stop="13656"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14213" g_stop="13950" g_length="264"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="264" r_length="264" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0180C05.2" gen_strand="-" ref_id="SGN-E396922" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>264</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0180C05.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E396922" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14213" e_stop="13950"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCGATCCAGGGTGGGACCGCACCATCACAGGATTGTTGTGCTAGGCTTAAGAACCAGCAGCCTTGCATTTGTGGATTTATGAAGGATCCTAATTTGAGGCAATATGTTAATTCTCCAAATGCTAGGAAAGTTGCTGGACAATGTGGTGTAAGCATTCCTAGTTGTTAATTAGGTTTACAACATTTTACTTGTTGTATACATATGGGTCTTATGTATTATGGAAAAAAATATATATATGTAAGACTTTAAATAAAAAATGGTTG</genome_strand>
        <mrna_strand>TGCGATCCAGGGTGGGACCGCACCATCACAGGATTGTTGTGCTAGGCTTAAGAACCAGCAGCCTTGCATTTGTGGATTTATGAAGGATCCTAATTTGAGGCAATATGTTAATTCTCCAAATGCTAGGAAAGTTGCTGGACAATGTGGTGTAAGCATTCCTAGTTGTTAATTAGGTTTACAACATTTTACTTGTTGTATACATATGGGTCTTATGTATTATGGAAAAAAATATATATATGTAAGACTTTAAATAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E337220" ref_strand="+" ref_description="SGN-E337220 [cTOE-7-M7]">
      <seq>aatttctcttataatttaaattgtataatgaaaatgactaaggtttgttcttttgtggcagtaatgttggtgatgatccttgtttgtgatcaatttggggctaacgaggcggcgacatgcagcgcctcgcagctgagcccgtgtttgggtgcgatccatggtgggaccgcaccatcacaggattgttgtgctaggcttaagaaccagcagccttgcatttgtggatttatgaaggatcctaatttgaggcaatatgttaattctccaaatgctaggaaagttgctggacaatgtggtgtaagcattcctagttgttaattaggtttacaacattttacttgttgtatacatatgggtcttatgtattatggaaaaaaatatatatatgtaagactttaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0180C05.2" temp_strand="-" temp_description="C02HBa0180C05.2  AC215411.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0180C05 sequenced_by:kribb upload_account_name:korea">
        <position start="14662" stop="13663"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14362" g_stop="13963" g_length="400"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="400" r_length="400" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0180C05.2" gen_strand="-" ref_id="SGN-E337220" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>400</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0180C05.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E337220" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14362" e_stop="13963"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTTCTCTTATAATTTAAATTGTATAATGAAAATGACTAAGGTTTGTTCTTTTGTGGCAGTAATGTTGGTGATGATCCTTGTTTGTGATCAATTTGGGGCTAACGAGGCGGCGACATGCAGCGCCTCGCAGCTGAGCCCGTGTTTGGGTGCGATCCAGGGTGGGACCGCACCATCACAGGATTGTTGTGCTAGGCTTAAGAACCAGCAGCCTTGCATTTGTGGATTTATGAAGGATCCTAATTTGAGGCAATATGTTAATTCTCCAAATGCTAGGAAAGTTGCTGGACAATGTGGTGTAAGCATTCCTAGTTGTTAATTAGGTTTACAACATTTTACTTGTTGTATACATATGGGTCTTATGTATTATGGAAAAAAATATATATATGTAAGACTTTAAA</genome_strand>
        <mrna_strand>AATTTCTCTTATAATTTAAATTGTATAATGAAAATGACTAAGGTTTGTTCTTTTGTGGCAGTAATGTTGGTGATGATCCTTGTTTGTGATCAATTTGGGGCTAACGAGGCGGCGACATGCAGCGCCTCGCAGCTGAGCCCGTGTTTGGGTGCGATCCATGGTGGGACCGCACCATCACAGGATTGTTGTGCTAGGCTTAAGAACCAGCAGCCTTGCATTTGTGGATTTATGAAGGATCCTAATTTGAGGCAATATGTTAATTCTCCAAATGCTAGGAAAGTTGCTGGACAATGTGGTGTAAGCATTCCTAGTTGTTAATTAGGTTTACAACATTTTACTTGTTGTATACATATGGGTCTTATGTATTATGGAAAAAAATATATATATGTAAGACTTTAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E465598" ref_strand="+" ref_description="SGN-E465598 [cPRO-21-L11]">
      <seq>aagctctggagatcgtaatgagggaaagatctggtggaacatttgatacgattagtaaggtaatgggtgctcatctgggaattgcatcatcagtaagcagcttcttcggtgaaggtggtttactagggaaaagggaagctggagatccaacatcaccaccaccaccagtggaggttgaacctctgaggcctgtcctcacacatgcagcaccagcagaagacacaagatttaggcggatcatgagaggtggttttacagacatgctcagaggaaaagcaaagggcaccgaggatactcccccaagtcaatgataatggctcttccttctgcaggagatttaaaaaggaaagtaagttctgtatgttgtgtagtagactacgatgcttccatttgttgattctgcgcccaagttttcccttcacagggatgaaattttgcaatttatttgattcttcatgtacaagaaatgtaatgaatttgacaacgaaacgagcagaaagtgtatacatttactagttgtacaaatgatatgagagattcatagcagtcttgtttccccgaaactctaaccagcaaccaaacagacctttgataataatagacatattaaataaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0180C05.2" temp_strand="-" temp_description="C02HBa0180C05.2  AC215411.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0180C05 sequenced_by:kribb upload_account_name:korea">
        <position start="18121" stop="16902"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17821" g_stop="17202" g_length="620"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="622" r_length="622" r_score="0.927"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0180C05.2" gen_strand="-" ref_id="SGN-E465598" ref_strand="+">
        <total_alignment_score>0.927</total_alignment_score>
        <cumulative_length_of_scored_exons>620</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0180C05.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E465598" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17821" e_stop="17202"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGCTCTGGAGATCGTAATGAGGGAAAGATCTGGTGGAACATTTGATACGATTAGTAAGGTAATGGGTGCTCATCTGGGAATTGCGTCATCAGTAAGCAGCTTCTTTGGCGAAGGTGGTTTACTAGGGAAAAGGGAAGCTGGAGATCCAACATCACCACCAGCACCAGTGGAAGTTGAACCTCTGAGGCCTGTCCTCACACATGCAGCACCAGCAGAAGACACTAGATTTAGGCGGATCATGAGAGGTGGTTTTACAGACATGCTCAGAGGAAAAGCAAAGGGCGCTGGGGATACTCCCCCAAGTCAATGATAATGGCTCTTTCATCTGCAGGAGAATTAAAAAGGAAAGTAAGTTCTGTATGTTGTGCAATAGACTACAATGCTTCCATTTGTTGATTCTGCGCTGAAGTTTTCCCTTCACAGGGATGAAATTTTGCAATTTATTTCATTCTTTATGTACAAGAAACGTAATGAATTCGACAACAAAACGAGGAGAAAGTGTATACATTTACTAGTTGTACAAAATGATATGGGAGATTCATAGCTGTCTTGTTTTCATG-TACTCTAACCAGTAACC-AACAGACCTTTGATAAT-ATACATATATTAAAATAGATACATA</genome_strand>
        <mrna_strand>AAGCTCTGGAGATCGTAATGAGGGAAAGATCTGGTGGAACATTTGATACGATTAGTAAGGTAATGGGTGCTCATCTGGGAATTGCATCATCAGTAAGCAGCTTCTTCGGTGAAGGTGGTTTACTAGGGAAAAGGGAAGCTGGAGATCCAACATCACCACCACCACCAGTGGAGGTTGAACCTCTGAGGCCTGTCCTCACACATGCAGCACCAGCAGAAGACACAAGATTTAGGCGGATCATGAGAGGTGGTTTTACAGACATGCTCAGAGGAAAAGCAAAGGGCACCGAGGATACTCCCCCAAGTCAATGATAATGGCTCTTCCTTCTGCAGGAGATTTAAAAAGGAAAGTAAGTTCTGTATGTTGTGTAGTAGACTACGATGCTTCCATTTGTTGATTCTGCGCCCAAGTTTTCCCTTCACAGGGATGAAATTTTGCAATTTATTTGATTCTTCATGTACAAGAAATGTAATGAATTTGACAACGAAACGAGCAGAAAGTGTATACATTTACTAGTTGTAC-AAATGATATGAGAGATTCATAGCAGTCTTGTTTCCCCGAAACTCTAACCAGCAACCAAACAGACCTTTGATAATAATAGACATATTAAATAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E539484" ref_strand="+" ref_description="SGN-E539484 [TUS-59-E8](-)">
      <seq>agtgacatgatgcgtcgtcgtgagagagccaacacattttgtgaatcaattcgtgctcttgatgctactgatctttctgcttcaagtgtcagagacttccttctacctgcaattcaaaatctgttaaaagatgctgattctcttgatccagcacacaaagaagctctggagatcgtaatgagggaaagatctggtggaacatttgatacgattagtaaggtaatgggtgctcatctgggaattgcgtcatcagtaagcagcttctttggcgaaggtggtttactagggaaaagggaagctggagatccaacatcaccaccagcaccagtggaagttgaacctctgaggcctgtcctcacacatgctgcaccagcagaagacactagatttaggcggatcatgagaggtggttttacagacatgctcagaggaaaagcaaagggcgctggggatactcccccaagtcaatgataatggctctttcatctgcaggagaattaaaaaggaaagtaagttctgtatgttgtgcaatagactacaatgcttccatttgttgattctgcgctgaagttttcccttcacagggatgaaattttgcaatttatttcattctttatgtacaagaaacgtaatgaattcgacaacaaaacgaggagaaagtgtatacatttactagttgtacaaaatgatatgggagattcatagctgtcttgttttcatgtactctaaccagtaaccaacagacctttgataatatacatatattaaaataaaaaagaaaaaaaaaactcgaggggggcccg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0180C05.2" temp_strand="-" temp_description="C02HBa0180C05.2  AC215411.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0180C05 sequenced_by:kribb upload_account_name:korea">
        <position start="19050" stop="16902"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18750" g_stop="18681" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="70" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18680" i_stop="17912" i_length="769">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="17911" g_stop="17209" g_length="703"/>
          <reference_exon_boundary r_type="cDNA" r_start="71" r_stop="773" r_length="703" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="774" polyA_stop="788"/>
      <MATCH_line gen_id="C02HBa0180C05.2" gen_strand="-" ref_id="SGN-E539484" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>773</cumulative_length_of_scored_exons>
        <coverage percentage="0.963" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0180C05.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E539484" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18750" e_stop="18681"/>
          <exon e_start="17911" e_stop="17209"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTGACATGATGCGTCGTCGTGAGAGAGCCAACACATTTTGTGAATCAATTCGTGCTCTTGATGCTACTGGTTTGCTCCTTTTAATTATTCTTCTTCTCTTTCATTCATCTCTTTACTTTCTGAAGATATAAATGTTCTTCAAAATGATCAGCCTCCAGGTTTAGCTGCTTCTTGAGATAAATCAGAGTACAATATACTATGTATTGCAGTGGACTGATACAGGTGGTTGATATCCTGATTTTTGGTTGTGAAACTACCTTTAGCAATCATGGTTGATCAAAGTGATTAGTTGAGTTTTTTCCCATCTAAGAAGAGTTAATTACCTAAAAATTGACCGATTTTTTACCTAAATACATGCCGAAGTTAACATAAATGGTTGATTGTGATTTGTTGGGTTTAGTGTGCATCCTTTTCTTGTTCATATTAATACAAGTGAGTGACGAACCCTGTCTTGAGATAGTTAAGTGAGAGTCAGGAAACTCTCAAATTAGTGAAGAGGCCGTCGTTACCTTCGGGATCGATGAAGGTTTGGCAGGAAGATGACTGCTGGGACCGTCTCTACTGAACACTAAAGCATTCATTATGTAGTCTCTAGGCTATGAAGGTGCAACTGATCTATCAAATAAATGTCAGAGGGGATGCAGAAGTCAGAAGAAGGTCCTAGGAGAAGTTCTATTGATCTCTTTTTATCTGGTTGTGTAGTGTAATACAAAAATATAACGACATGTACTATTGAAGCCTAAATGTCGCACACTTGCCTTTTCCTGCTTTTTGGCATTTTGTCTGGACGATTTCATTGAAATCTTCCTTTACTCAGTTTATGATTGTAATATTGCAGATCTTTCTGCTTCAAGTGTCAGAGACTTCCTTCTACCTGCAATTCAAAATCTGTTAAAAGATGCTGATTCTCTTGATCCAGCACACAAAGAAGCTCTGGAGATCGTAATGAGGGAAAGATCTGGTGGAACATTTGATACGATTAGTAAGGTAATGGGTGCTCATCTGGGAATTGCGTCATCAGTAAGCAGCTTCTTTGGCGAAGGTGGTTTACTAGGGAAAAGGGAAGCTGGAGATCCAACATCACCACCAGCACCAGTGGAAGTTGAACCTCTGAGGCCTGTCCTCACACATGCAGCACCAGCAGAAGACACTAGATTTAGGCGGATCATGAGAGGTGGTTTTACAGACATGCTCAGAGGAAAAGCAAAGGGCGCTGGGGATACTCCCCCAAGTCAATGATAATGGCTCTTTCATCTGCAGGAGAATTAAAAAGGAAAGTAAGTTCTGTATGTTGTGCAATAGACTACAATGCTTCCATTTGTTGATTCTGCGCTGAAGTTTTCCCTTCACAGGGATGAAATTTTGCAATTTATTTCATTCTTTATGTACAAGAAACGTAATGAATTCGACAACAAAACGAGGAGAAAGTGTATACATTTACTAGTTGTACAAAATGATATGGGAGATTCATAGCTGTCTTGTTTTCATGTACTCTAACCAGTAACCAACAGACCTTTGATAATATACATATATTAAAATAG</genome_strand>
        <mrna_strand>AGTGACATGATGCGTCGTCGTGAGAGAGCCAACACATTTTGTGAATCAATTCGTGCTCTTGATGCTACTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTTTCTGCTTCAAGTGTCAGAGACTTCCTTCTACCTGCAATTCAAAATCTGTTAAAAGATGCTGATTCTCTTGATCCAGCACACAAAGAAGCTCTGGAGATCGTAATGAGGGAAAGATCTGGTGGAACATTTGATACGATTAGTAAGGTAATGGGTGCTCATCTGGGAATTGCGTCATCAGTAAGCAGCTTCTTTGGCGAAGGTGGTTTACTAGGGAAAAGGGAAGCTGGAGATCCAACATCACCACCAGCACCAGTGGAAGTTGAACCTCTGAGGCCTGTCCTCACACATGCTGCACCAGCAGAAGACACTAGATTTAGGCGGATCATGAGAGGTGGTTTTACAGACATGCTCAGAGGAAAAGCAAAGGGCGCTGGGGATACTCCCCCAAGTCAATGATAATGGCTCTTTCATCTGCAGGAGAATTAAAAAGGAAAGTAAGTTCTGTATGTTGTGCAATAGACTACAATGCTTCCATTTGTTGATTCTGCGCTGAAGTTTTCCCTTCACAGGGATGAAATTTTGCAATTTATTTCATTCTTTATGTACAAGAAACGTAATGAATTCGACAACAAAACGAGGAGAAAGTGTATACATTTACTAGTTGTACAAAATGATATGGGAGATTCATAGCTGTCTTGTTTTCATGTACTCTAACCAGTAACCAACAGACCTTTGATAATATACATATATTAAAATAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E465457" ref_strand="+" ref_description="SGN-E465457 [cPRO-21-M11]">
      <seq>aagctctggagatcgtaatgagggaaagatctggtggaacatttgatacgattagtaaggtaatgggtgctcatctgggaattgcatcatcagtaagcagcttcttcggtgaaggtggtttactagggaaaagggaagctggagatccaacatcaccaccaccaccagtggaggttgaacctctgaggcctgtcctcacacatgcagcaccagcagaagacacaagatttaggcggatcatgagaggtggttttacagacatgctcagaggaaaagcaaagggcaccgaggatactcccccaagtcaatgataatggctcttccttctgcaggagatttaaaaaggaaagtaagttctgtatgttgtgtagtaaactaccatgcttccatttgttgattctgcgcccaagttttcccttcacagggatgaaattttgcaatttatttgattcttcctgtacaagaaatgtaatgaatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0180C05.2" temp_strand="-" temp_description="C02HBa0180C05.2  AC215411.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0180C05 sequenced_by:kribb upload_account_name:korea">
        <position start="18121" stop="17044"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17821" g_stop="17344" g_length="478"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="478" r_length="478" r_score="0.954"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0180C05.2" gen_strand="-" ref_id="SGN-E465457" ref_strand="+">
        <total_alignment_score>0.954</total_alignment_score>
        <cumulative_length_of_scored_exons>478</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0180C05.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E465457" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17821" e_stop="17344"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGCTCTGGAGATCGTAATGAGGGAAAGATCTGGTGGAACATTTGATACGATTAGTAAGGTAATGGGTGCTCATCTGGGAATTGCGTCATCAGTAAGCAGCTTCTTTGGCGAAGGTGGTTTACTAGGGAAAAGGGAAGCTGGAGATCCAACATCACCACCAGCACCAGTGGAAGTTGAACCTCTGAGGCCTGTCCTCACACATGCAGCACCAGCAGAAGACACTAGATTTAGGCGGATCATGAGAGGTGGTTTTACAGACATGCTCAGAGGAAAAGCAAAGGGCGCTGGGGATACTCCCCCAAGTCAATGATAATGGCTCTTTCATCTGCAGGAGAATTAAAAAGGAAAGTAAGTTCTGTATGTTGTGCAATAGACTACAATGCTTCCATTTGTTGATTCTGCGCTGAAGTTTTCCCTTCACAGGGATGAAATTTTGCAATTTATTTCATTCTTTATGTACAAGAAACGTAATGAATT</genome_strand>
        <mrna_strand>AAGCTCTGGAGATCGTAATGAGGGAAAGATCTGGTGGAACATTTGATACGATTAGTAAGGTAATGGGTGCTCATCTGGGAATTGCATCATCAGTAAGCAGCTTCTTCGGTGAAGGTGGTTTACTAGGGAAAAGGGAAGCTGGAGATCCAACATCACCACCACCACCAGTGGAGGTTGAACCTCTGAGGCCTGTCCTCACACATGCAGCACCAGCAGAAGACACAAGATTTAGGCGGATCATGAGAGGTGGTTTTACAGACATGCTCAGAGGAAAAGCAAAGGGCACCGAGGATACTCCCCCAAGTCAATGATAATGGCTCTTCCTTCTGCAGGAGATTTAAAAAGGAAAGTAAGTTCTGTATGTTGTGTAGTAAACTACCATGCTTCCATTTGTTGATTCTGCGCCCAAGTTTTCCCTTCACAGGGATGAAATTTTGCAATTTATTTGATTCTTCCTGTACAAGAAATGTAATGAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E704984" ref_strand="+" ref_description="SGN-E704984 [FA25DD02]">
      <seq>tgagttctgaaataaacatgaaggcaacagctgccaatctttttaaagtcattgttccatgtattgatgccaaggttgcctcaacacatgttttgcctgctcttgtaacgcttggttctgaccaaaacttgaatgtgaaatatgccagtattgatgcttttggagctgtggcgcagcagtataaaaatgatgcgattgttgataaaatacgtgttcaaatggatgcttttcttgaggatggatcacatgaagctacgttagctgtagttcgtgcattggtgatggcagtgccacataccacggagggacttagagattatttgttgtccaagattttcttacttacagcaacacctcctccttcaagtgacatgatgcgtcgtcgtgagagagccaacacattttgtgaatcaattcgtgctcttgatgctactggtttgctccttttaattattcttcttctctttcattcatctctttactttctgaagatataaatgttcttcaaaatgatcagcctccaggtttagctgcttcttgagataaatcagagtacaatatactatgtattgcagtggactgatacaggtggttgatatcctgatttttggttgtgaaactacctttagcaatcatggttgatcaaagtgattagttgagttttttcccatctaagaagagttaattacctaaaaattgaccgattttttacctaaatacatgccgaagttaacataaatggttgattgtgatttgttgggtttagtgtgcatccttttcttgttcatattaatacaagtga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0180C05.2" temp_strand="-" temp_description="C02HBa0180C05.2  AC215411.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0180C05 sequenced_by:kribb upload_account_name:korea">
        <position start="19704" stop="18014"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19404" g_stop="19352" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="53" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19351" i_stop="19274" i_length="78">
            <donor d_prob="0.843" d_score="1.00"/>
            <acceptor a_prob="0.928" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19273" g_stop="19133" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="54" r_stop="194" r_length="141" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19132" i_stop="19039" i_length="94">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.900" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19038" g_stop="18915" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="195" r_stop="318" r_length="124" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18914" i_stop="18798" i_length="117">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18797" g_stop="18314" g_length="484"/>
          <reference_exon_boundary r_type="cDNA" r_start="319" r_stop="802" r_length="484" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0180C05.2" gen_strand="-" ref_id="SGN-E704984" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>802</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0180C05.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E704984" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19404" e_stop="19352"/>
          <exon e_start="19273" e_stop="19133"/>
          <exon e_start="19038" e_stop="18915"/>
          <exon e_start="18797" e_stop="18314"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGTTCTGAAATAAACATGAAGGCAACAGCTGCCAATCTTTTTAAAGTCATTGTAAGACCTTTGGTTTTTGTGAAATTGCTTAAATTTAAGCATGGTCTACGACTTTGATCATTCTTGTTAGTTCACCAGGTTCCATGTATTGATGCCAAGGTTGCCTCAACACATGTTTTGCCTGCTCTTGTAACGCTTGGTTCTGACCAAAACTTGAATGTGAAATATGCCAGTATTGATGCTTTTGGAGCTGTGGCGCAGCAGTATAAAAATGATGCGGTATAGGGTTTTTGCTTAAATATCTGATGTCATTCTTGTTCTGTGTTCATCTAGAGGCTTTAATGAGACGTTCTGTTCTAACTTTTCTTGCTAGATTGTTGATAAAATACGTGTTCAAATGGATGCTTTTCTTGAGGATGGATCACATGAAGCTACGTTAGCTGTAGTTCGTGCATTGGTGATGGCAGTGCCACATACCACGGAGGGACTTAGAGATTATATCCTCAACCTCTTAGCTTTCATGCACTGCTTGAAGTAGCAATGCATTTTTATAATGTGTGCCAGAACTAGTTTTGATTTCTAATTCTCATCAACTTTCTTTAACTTTAGCATACATTTGTTGTCCAAGATTTTCTTACTTACAGCAACACCTCCTCCTTCAAGTGACATGATGCGTCGTCGTGAGAGAGCCAACACATTTTGTGAATCAATTCGTGCTCTTGATGCTACTGGTTTGCTCCTTTTAATTATTCTTCTTCTCTTTCATTCATCTCTTTACTTTCTGAAGATATAAATGTTCTTCAAAATGATCAGCCTCCAGGTTTAGCTGCTTCTTGAGATAAATCAGAGTACAATATACTATGTATTGCAGTGGACTGATACAGGTGGTTGATATCCTGATTTTTGGTTGTGAAACTACCTTTAGCAATCATGGTTGATCAAAGTGATTAGTTGAGTTTTTTCCCATCTAAGAAGAGTTAATTACCTAAAAATTGACCGATTTTTTACCTAAATACATGCCGAAGTTAACATAAATGGTTGATTGTGATTTGTTGGGTTTAGTGTGCATCCTTTTCTTGTTCATATTAATACAAGTGA</genome_strand>
        <mrna_strand>TGAGTTCTGAAATAAACATGAAGGCAACAGCTGCCAATCTTTTTAAAGTCATT..............................................................................GTTCCATGTATTGATGCCAAGGTTGCCTCAACACATGTTTTGCCTGCTCTTGTAACGCTTGGTTCTGACCAAAACTTGAATGTGAAATATGCCAGTATTGATGCTTTTGGAGCTGTGGCGCAGCAGTATAAAAATGATGCG..............................................................................................ATTGTTGATAAAATACGTGTTCAAATGGATGCTTTTCTTGAGGATGGATCACATGAAGCTACGTTAGCTGTAGTTCGTGCATTGGTGATGGCAGTGCCACATACCACGGAGGGACTTAGAGATT.....................................................................................................................ATTTGTTGTCCAAGATTTTCTTACTTACAGCAACACCTCCTCCTTCAAGTGACATGATGCGTCGTCGTGAGAGAGCCAACACATTTTGTGAATCAATTCGTGCTCTTGATGCTACTGGTTTGCTCCTTTTAATTATTCTTCTTCTCTTTCATTCATCTCTTTACTTTCTGAAGATATAAATGTTCTTCAAAATGATCAGCCTCCAGGTTTAGCTGCTTCTTGAGATAAATCAGAGTACAATATACTATGTATTGCAGTGGACTGATACAGGTGGTTGATATCCTGATTTTTGGTTGTGAAACTACCTTTAGCAATCATGGTTGATCAAAGTGATTAGTTGAGTTTTTTCCCATCTAAGAAGAGTTAATTACCTAAAAATTGACCGATTTTTTACCTAAATACATGCCGAAGTTAACATAAATGGTTGATTGTGATTTGTTGGGTTTAGTGTGCATCCTTTTCTTGTTCATATTAATACAAGTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E235967" ref_strand="+" ref_description="SGN-E235967 [cLED-16-M11]">
      <seq>ggggaaccttacctgacacacatcatgctttctgtattcttggtggcagttggtgatgatggtgatttatcatatttccctgcaacgtgccaatcaagaataagaggtttgaaaccgaaaactgcagtagctgaaagacttgctaccatcggtgtcctgcctcttctgctggctggtgttttaggatctcctaggaagcatgaactactgacagagtacttgagaaatctcttgattcaaacttcaggacaagagagtcagacagtgaagcgcgagattttcttttctgttcgctttctttgcactttcgatgaacatcacaatatgatttttaacatcctctgggaaatggttgtgagttctgaaataacatgaatgcaacagctgccaatcttttttaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0180C05.2" temp_strand="-" temp_description="C02HBa0180C05.2  AC215411.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0180C05 sequenced_by:kribb upload_account_name:korea">
        <position start="20232" stop="19058"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19932" g_stop="19827" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="106" r_length="106" r_score="0.981"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19826" i_stop="19732" i_length="95">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19731" g_stop="19536" g_length="196"/>
          <reference_exon_boundary r_type="cDNA" r_start="107" r_stop="302" r_length="196" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19535" i_stop="19458" i_length="78">
            <donor d_prob="0.431" d_score="1.00"/>
            <acceptor a_prob="0.944" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19457" g_stop="19357" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="303" r_stop="402" r_length="100" r_score="0.960"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0180C05.2" gen_strand="-" ref_id="SGN-E235967" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>403</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0180C05.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E235967" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19932" e_stop="19827"/>
          <exon e_start="19731" e_stop="19536"/>
          <exon e_start="19457" e_stop="19357"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGGAACCTTACCTGACACACATCATGCTACCTGTATTCTTGGTGGCAGTTGGTGATGATGGTGATTTATCATATTTCCCTGCAACGTGCCAATCAAGAATAAGAGGTAATGAGTTAAAAACTTCTTGTCTCCATCAAACCTTTTAAATGATAGGTCATGTTTAGACCTTATCAAATTGATTTTGATTTGCTCCTCAACAGGTTTGAAACCGAAAACTGCAGTAGCTGAAAGACTTGCTACCATCGGTGTCCTGCCTCTTCTGCTGGCTGGTGTTTTAGGATCTCCTAGGAAGCATGAACTACTGACAGAGTACTTGAGAAATCTCTTGATTCAAACTTCAGGACAAGAGAGTCAGACAGTGAAGCGCGAGATTTTCTTTTCTGTTCGCTTTCTTTGGTTTGTGCCATTTTAATAAAGGCATTACAGTTCTGTGTCTGAACTCCTTAGATGATGGCTGACTATATTTTTCTGCAGCACTTTCGATGAACATCACAATATGATTTTTAACATCCTCTGGGAAATGGTTGTGAGTTCTGAAATAAACATGAAGGCAACAGCTGCCAATCTTTTTAAAG</genome_strand>
        <mrna_strand>GGGGAACCTTACCTGACACACATCATGCTTTCTGTATTCTTGGTGGCAGTTGGTGATGATGGTGATTTATCATATTTCCCTGCAACGTGCCAATCAAGAATAAGAG...............................................................................................GTTTGAAACCGAAAACTGCAGTAGCTGAAAGACTTGCTACCATCGGTGTCCTGCCTCTTCTGCTGGCTGGTGTTTTAGGATCTCCTAGGAAGCATGAACTACTGACAGAGTACTTGAGAAATCTCTTGATTCAAACTTCAGGACAAGAGAGTCAGACAGTGAAGCGCGAGATTTTCTTTTCTGTTCGCTTTCTTTG..............................................................................CACTTTCGATGAACATCACAATATGATTTTTAACATCCTCTGGGAAATGGTTGTGAGTTCTGAAAT-AACATGAATGCAACAGCTGCCAATCTTTTTTAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E539486" ref_strand="+" ref_description="SGN-E539486 [TUS-59-E8]">
      <seq>tttcaattggtgtgtgatccatctggagtggtagtggaaacaacaatcaaggaacttgttccagctttagtaaactgggggaaggaattggatcatttactacaagtcttactatctcatgctttgggctctgctcagcgttgtcaaccactttcaggggtggaaggttctatcgagtcacatcttcgtgctttaggagagagagagcgatggaacatagatgttctgatgcgcttactgtcggagttgtttccatttgtacgcaagaaagctattgatacctgtccattcccattggtttcggacgatgaaagactagtcttttctacttcagttcttgaacagtatgctggaggaaagatggactggccttcttttgagtggttgcatattgactgcttttcagcgttgattgaactagcctctctattacctcagaaggaagataacctaaggaatcgaatcacgcggtttttattggcagtttcagacctgctcggggaaccttacctgacacacatcatgctacctgtattcttggtggcagttggtgatgatggtgatttatcatatttcccctgcacgtgccaatcaagaataagaggtttgaaaccgaaaactgcagtagctgaaagacttgctaccatcggtgtcctgcctcttctgctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0180C05.2" temp_strand="-" temp_description="C02HBa0180C05.2  AC215411.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0180C05 sequenced_by:kribb upload_account_name:korea">
        <position start="21017" stop="19367"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20717" g_stop="20580" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="138" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20579" i_stop="20494" i_length="86">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20493" g_stop="20279" g_length="215"/>
          <reference_exon_boundary r_type="cDNA" r_start="139" r_stop="353" r_length="215" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="20278" i_stop="20164" i_length="115">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.934" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="20163" g_stop="20046" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="354" r_stop="471" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="20045" i_stop="19960" i_length="86">
            <donor d_prob="0.948" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19959" g_stop="19827" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="472" r_stop="604" r_length="133" r_score="0.977"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="19826" i_stop="19732" i_length="95">
            <donor d_prob="0.996" d_score="0.94"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="19731" g_stop="19667" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="605" r_stop="669" r_length="65" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0180C05.2" gen_strand="-" ref_id="SGN-E539486" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>669</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0180C05.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E539486" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20717" e_stop="20580"/>
          <exon e_start="20493" e_stop="20279"/>
          <exon e_start="20163" e_stop="20046"/>
          <exon e_start="19959" e_stop="19827"/>
          <exon e_start="19731" e_stop="19667"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCAATTGGTGTGTGATCCATCTGGAGTGGTAGTGGAAACAACAATCAAGGAACTTGTTCCAGCTTTAGTAAACTGGGGGAAGGAATTGGATCATTTACTACAAGTCTTACTATCTCATGCTTTGGGCTCTGCTCAGGTATGGATTCTGCATTTACTTAGTTCTCCTCACTGAAGCAGTAACTTGTCTTAAACATGGAGCTGATATATTATCCCTCCTTCCAGCGTTGTCAACCACTTTCAGGGGTGGAAGGTTCTATCGAGTCACATCTTCGTGCTTTAGGAGAGAGAGAGCGATGGAACATAGATGTTCTGATGCGCTTACTGTCGGAGTTGTTTCCATTTGTACGCAAGAAAGCTATTGATACCTGTCCATTCCCATTGGTTTCGGACGATGAAAGACTAGTCTTTTCTACTTCAGTTCTTGAACAGTATGCTGGGTAATATCCCCTTTTACCTTAACCTGCGTTTCTAATCTACCTTTCTATTCCTTCTTCAAAGGTGCTCTCACAATGTCTAGTTAATACTTGCAAGATATTTGAATTGTCTATGCAGAGGAAAGATGGACTGGCCTTCTTTTGAGTGGTTGCATATTGACTGCTTTTCAGCGTTGATTGAACTAGCCTCTCTATTACCTCAGAAGGAAGATAACCTAAGGAATCGAATCACGCGGGTAGCTTGAATTGTTTCTCTTAATTTTTGATGCTTTAGTTTTAGAATTGCCTCCTTTCCGGATTCGTCTTTAATTTTGCAATGCAGTTTTTATTGGCAGTTTCAGACCTGCTCGGGGAACCTTACCTGACACACATCATGCTACCTGTATTCTTGGTGGCAGTTGGTGATGATGGTGATTTATCATATTT-CCCTGCAACGTGCCAATCAAGAATAAGAGGTAATGAGTTAAAAACTTCTTGTCTCCATCAAACCTTTTAAATGATAGGTCATGTTTAGACCTTATCAAATTGATTTTGATTTGCTCCTCAACAGGTTTGAAACCGAAAACTGCAGTAGCTGAAAGACTTGCTACCATCGGTGTCCTGCCTCTTCTGCTG</genome_strand>
        <mrna_strand>TTTCAATTGGTGTGTGATCCATCTGGAGTGGTAGTGGAAACAACAATCAAGGAACTTGTTCCAGCTTTAGTAAACTGGGGGAAGGAATTGGATCATTTACTACAAGTCTTACTATCTCATGCTTTGGGCTCTGCTCAG......................................................................................CGTTGTCAACCACTTTCAGGGGTGGAAGGTTCTATCGAGTCACATCTTCGTGCTTTAGGAGAGAGAGAGCGATGGAACATAGATGTTCTGATGCGCTTACTGTCGGAGTTGTTTCCATTTGTACGCAAGAAAGCTATTGATACCTGTCCATTCCCATTGGTTTCGGACGATGAAAGACTAGTCTTTTCTACTTCAGTTCTTGAACAGTATGCTGG...................................................................................................................AGGAAAGATGGACTGGCCTTCTTTTGAGTGGTTGCATATTGACTGCTTTTCAGCGTTGATTGAACTAGCCTCTCTATTACCTCAGAAGGAAGATAACCTAAGGAATCGAATCACGCGG......................................................................................TTTTTATTGGCAGTTTCAGACCTGCTCGGGGAACCTTACCTGACACACATCATGCTACCTGTATTCTTGGTGGCAGTTGGTGATGATGGTGATTTATCATATTTCCCCTGC-ACGTGCCAATCAAGAATAAGAG...............................................................................................GTTTGAAACCGAAAACTGCAGTAGCTGAAAGACTTGCTACCATCGGTGTCCTGCCTCTTCTGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E276105" ref_strand="+" ref_description="SGN-E276105 [cLEN-12-L23]">
      <seq>tcagcgttgtcaaccactttcaggggtggaaggttctatcgagtcacatcttcgtgctttaggagagagagagcgatggaacatagatgttctgatgcgcttactgtcggagttgtttccatttgtacgcaagaaagctattgatacctgtccattcccattggtttcggacgatgaaagactagtcttttctacttcagttcttgaacagtatgctggaggaaagatggactggccttcttttgagtggttgcatattgactgcttttcagcgttgattgaactagcctctctattacctcagaaggaagataacctaaggaatcgaatcacgcggtttttattggcagtttcagacctgctcggggaaccttacctgacacacatcatgctacctgtattcttggtggcagttggtgatgatggtgatttatcatatttccctgcaacgtgccaatcaagaataagaggtttgaaaccgaaaactgcagtagctgaaagacttgctaccatcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0180C05.2" temp_strand="-" temp_description="C02HBa0180C05.2  AC215411.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0180C05 sequenced_by:kribb upload_account_name:korea">
        <position start="20796" stop="19387"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20497" g_stop="20279" g_length="219"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="219" r_length="219" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20278" i_stop="20164" i_length="115">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.934" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20163" g_stop="20046" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="220" r_stop="337" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="20045" i_stop="19960" i_length="86">
            <donor d_prob="0.948" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19959" g_stop="19827" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="338" r_stop="470" r_length="133" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19826" i_stop="19732" i_length="95">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19731" g_stop="19687" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="471" r_stop="515" r_length="45" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0180C05.2" gen_strand="-" ref_id="SGN-E276105" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>515</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0180C05.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E276105" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20497" e_stop="20279"/>
          <exon e_start="20163" e_stop="20046"/>
          <exon e_start="19959" e_stop="19827"/>
          <exon e_start="19731" e_stop="19687"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAGCGTTGTCAACCACTTTCAGGGGTGGAAGGTTCTATCGAGTCACATCTTCGTGCTTTAGGAGAGAGAGAGCGATGGAACATAGATGTTCTGATGCGCTTACTGTCGGAGTTGTTTCCATTTGTACGCAAGAAAGCTATTGATACCTGTCCATTCCCATTGGTTTCGGACGATGAAAGACTAGTCTTTTCTACTTCAGTTCTTGAACAGTATGCTGGGTAATATCCCCTTTTACCTTAACCTGCGTTTCTAATCTACCTTTCTATTCCTTCTTCAAAGGTGCTCTCACAATGTCTAGTTAATACTTGCAAGATATTTGAATTGTCTATGCAGAGGAAAGATGGACTGGCCTTCTTTTGAGTGGTTGCATATTGACTGCTTTTCAGCGTTGATTGAACTAGCCTCTCTATTACCTCAGAAGGAAGATAACCTAAGGAATCGAATCACGCGGGTAGCTTGAATTGTTTCTCTTAATTTTTGATGCTTTAGTTTTAGAATTGCCTCCTTTCCGGATTCGTCTTTAATTTTGCAATGCAGTTTTTATTGGCAGTTTCAGACCTGCTCGGGGAACCTTACCTGACACACATCATGCTACCTGTATTCTTGGTGGCAGTTGGTGATGATGGTGATTTATCATATTTCCCTGCAACGTGCCAATCAAGAATAAGAGGTAATGAGTTAAAAACTTCTTGTCTCCATCAAACCTTTTAAATGATAGGTCATGTTTAGACCTTATCAAATTGATTTTGATTTGCTCCTCAACAGGTTTGAAACCGAAAACTGCAGTAGCTGAAAGACTTGCTACCATCG</genome_strand>
        <mrna_strand>TCAGCGTTGTCAACCACTTTCAGGGGTGGAAGGTTCTATCGAGTCACATCTTCGTGCTTTAGGAGAGAGAGAGCGATGGAACATAGATGTTCTGATGCGCTTACTGTCGGAGTTGTTTCCATTTGTACGCAAGAAAGCTATTGATACCTGTCCATTCCCATTGGTTTCGGACGATGAAAGACTAGTCTTTTCTACTTCAGTTCTTGAACAGTATGCTGG...................................................................................................................AGGAAAGATGGACTGGCCTTCTTTTGAGTGGTTGCATATTGACTGCTTTTCAGCGTTGATTGAACTAGCCTCTCTATTACCTCAGAAGGAAGATAACCTAAGGAATCGAATCACGCGG......................................................................................TTTTTATTGGCAGTTTCAGACCTGCTCGGGGAACCTTACCTGACACACATCATGCTACCTGTATTCTTGGTGGCAGTTGGTGATGATGGTGATTTATCATATTTCCCTGCAACGTGCCAATCAAGAATAAGAG...............................................................................................GTTTGAAACCGAAAACTGCAGTAGCTGAAAGACTTGCTACCATCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E737286" ref_strand="+" ref_description="SGN-E737286 [LC09AF04]">
      <seq>cgccgcttgctagttgctcaatcttgtggggaacttgctgaattcgtgcgtcctgagattcgagattctcttatcttgtctattgtgcaacagctcattgaggattctgctacagttgttcgggaggcttctgctcataacttggcgttgcttctgcctctcttcccaagtagggacaaatatttcaaggtcagcctcactacataagcttcgaggcaatcatggagaagaaatgtgacttgagagaatttcccacaaagtaagctccgtagtctaggaatggagcattttccctcccctggtcttaatgtggctgcccaaactgattagatgatagcatatacataaatggatattctccaattcctttattttgttattgtgtgtgtaaaggttgaggagatgatgtttcaattggtgtgtgatccatctggagtggtagtggaaacaacaatcaaggaacttgttccagctttagtaaactgggggaaggaattggatcatttactacaagtcttactatctcatgctttgggctctgctcagcgttgtcaaccactttcaggggtggaaggttctatcgagtcacatcttcgtgctttaggagagagagagcgatggaacatagatgttctgatgcgcttactgtcggagttgtttccatttgtacgcaagaaagctattgatacctgtccattcccattggtttcggacgatgaaagactagtcttttctacttcagttcttgaacagtatgctgggtaatatccccttttacctttacctgcgtttctaatctacctttctattccttcttcaaaggtgctctcacaatgtctagttaatacttgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0180C05.2" temp_strand="-" temp_description="C02HBa0180C05.2  AC215411.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0180C05 sequenced_by:kribb upload_account_name:korea">
        <position start="21425" stop="19888"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21125" g_stop="20580" g_length="546"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="546" r_length="546" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20579" i_stop="20494" i_length="86">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20493" g_stop="20188" g_length="306"/>
          <reference_exon_boundary r_type="cDNA" r_start="547" r_stop="852" r_length="306" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0180C05.2" gen_strand="-" ref_id="SGN-E737286" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>852</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0180C05.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E737286" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21125" e_stop="20580"/>
          <exon e_start="20493" e_stop="20188"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGCCGCTTGCTAGTTGCTCAATCTTGTGGGGAACTTGCTGAATTCGTGCGTCCTGAGATTCGAGATTCTCTTATCTTGTCTATTGTGCAACAGCTCATTGAGGATTCTGCTACAGTTGTTCGGGAGGCTTCTGCTCATAACTTGGCGTTGCTTCTGCCTCTCTTCCCAAGTAGGGACAAATATTTCAAGGTCAGCCTCACTACATAAGCTTCGAGGCAATCATGGAGAAGAAATGTGACTTGAGAGAATTTCCCACAAAGTAAGCTCCGTAGTCTAGGAATGGAGCATTTTCCCTCCCCTGGTCTTAATGTGGCTGCCCAAACTGATTAGATGATAGCATATACATAAATGGATATTCTCCAATTCCTTTATTTTGTTATTGTGTGTGTAAAGGTTGAGGAGATGATGTTTCAATTGGTGTGTGATCCATCTGGAGTGGTAGTGGAAACAACAATCAAGGAACTTGTTCCAGCTTTAGTAAACTGGGGGAAGGAATTGGATCATTTACTACAAGTCTTACTATCTCATGCTTTGGGCTCTGCTCAGGTATGGATTCTGCATTTACTTAGTTCTCCTCACTGAAGCAGTAACTTGTCTTAAACATGGAGCTGATATATTATCCCTCCTTCCAGCGTTGTCAACCACTTTCAGGGGTGGAAGGTTCTATCGAGTCACATCTTCGTGCTTTAGGAGAGAGAGAGCGATGGAACATAGATGTTCTGATGCGCTTACTGTCGGAGTTGTTTCCATTTGTACGCAAGAAAGCTATTGATACCTGTCCATTCCCATTGGTTTCGGACGATGAAAGACTAGTCTTTTCTACTTCAGTTCTTGAACAGTATGCTGGGTAATATCCCCTTTTACCTTAACCTGCGTTTCTAATCTACCTTTCTATTCCTTCTTCAAAGGTGCTCTCACAATGTCTAGTTAATACTTGC</genome_strand>
        <mrna_strand>CGCCGCTTGCTAGTTGCTCAATCTTGTGGGGAACTTGCTGAATTCGTGCGTCCTGAGATTCGAGATTCTCTTATCTTGTCTATTGTGCAACAGCTCATTGAGGATTCTGCTACAGTTGTTCGGGAGGCTTCTGCTCATAACTTGGCGTTGCTTCTGCCTCTCTTCCCAAGTAGGGACAAATATTTCAAGGTCAGCCTCACTACATAAGCTTCGAGGCAATCATGGAGAAGAAATGTGACTTGAGAGAATTTCCCACAAAGTAAGCTCCGTAGTCTAGGAATGGAGCATTTTCCCTCCCCTGGTCTTAATGTGGCTGCCCAAACTGATTAGATGATAGCATATACATAAATGGATATTCTCCAATTCCTTTATTTTGTTATTGTGTGTGTAAAGGTTGAGGAGATGATGTTTCAATTGGTGTGTGATCCATCTGGAGTGGTAGTGGAAACAACAATCAAGGAACTTGTTCCAGCTTTAGTAAACTGGGGGAAGGAATTGGATCATTTACTACAAGTCTTACTATCTCATGCTTTGGGCTCTGCTCAG......................................................................................CGTTGTCAACCACTTTCAGGGGTGGAAGGTTCTATCGAGTCACATCTTCGTGCTTTAGGAGAGAGAGAGCGATGGAACATAGATGTTCTGATGCGCTTACTGTCGGAGTTGTTTCCATTTGTACGCAAGAAAGCTATTGATACCTGTCCATTCCCATTGGTTTCGGACGATGAAAGACTAGTCTTTTCTACTTCAGTTCTTGAACAGTATGCTGGGTAATATCCCCTTTTACCTTTACCTGCGTTTCTAATCTACCTTTCTATTCCTTCTTCAAAGGTGCTCTCACAATGTCTAGTTAATACTTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E282574" ref_strand="+" ref_description="SGN-E282574 [cLER-18-J10]">
      <seq>ttcaattgtatagtgatccatctggagtggtagtggtaacaacaatcaaggaacttgttccagctttagtaaactgggggaaggaattggatcatttactacaagtcttactatctcatgctttgggctctgctcagcgttgtcaaccactttcaggggtggaaggttctatcgagtcacatcttcgtgctttaggagagagagagcgatggaacatatatgttctgatgcgcttactgtcggagttgattccatttgtacgcaagaaagctattgatacctgtccattcccattggtttcggacgatgaaagactagacttttctact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0180C05.2" temp_strand="-" temp_description="C02HBa0180C05.2  AC215411.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0180C05 sequenced_by:kribb upload_account_name:korea">
        <position start="21016" stop="20002"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20716" g_stop="20580" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="137" r_length="137" r_score="0.964"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20579" i_stop="20494" i_length="86">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20493" g_stop="20302" g_length="192"/>
          <reference_exon_boundary r_type="cDNA" r_start="138" r_stop="329" r_length="192" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0180C05.2" gen_strand="-" ref_id="SGN-E282574" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>329</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0180C05.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E282574" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20716" e_stop="20580"/>
          <exon e_start="20493" e_stop="20302"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCAATTGGTGTGTGATCCATCTGGAGTGGTAGTGGAAACAACAATCAAGGAACTTGTTCCAGCTTTAGTAAACTGGGGGAAGGAATTGGATCATTTACTACAAGTCTTACTATCTCATGCTTTGGGCTCTGCTCAGGTATGGATTCTGCATTTACTTAGTTCTCCTCACTGAAGCAGTAACTTGTCTTAAACATGGAGCTGATATATTATCCCTCCTTCCAGCGTTGTCAACCACTTTCAGGGGTGGAAGGTTCTATCGAGTCACATCTTCGTGCTTTAGGAGAGAGAGAGCGATGGAACATAGATGTTCTGATGCGCTTACTGTCGGAGTTGTTTCCATTTGTACGCAAGAAAGCTATTGATACCTGTCCATTCCCATTGGTTTCGGACGATGAAAGACTAGTCTTTTCTACT</genome_strand>
        <mrna_strand>TTCAATTGTATAGTGATCCATCTGGAGTGGTAGTGGTAACAACAATCAAGGAACTTGTTCCAGCTTTAGTAAACTGGGGGAAGGAATTGGATCATTTACTACAAGTCTTACTATCTCATGCTTTGGGCTCTGCTCAG......................................................................................CGTTGTCAACCACTTTCAGGGGTGGAAGGTTCTATCGAGTCACATCTTCGTGCTTTAGGAGAGAGAGAGCGATGGAACATATATGTTCTGATGCGCTTACTGTCGGAGTTGATTCCATTTGTACGCAAGAAAGCTATTGATACCTGTCCATTCCCATTGGTTTCGGACGATGAAAGACTAGACTTTTCTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E220814" ref_strand="+" ref_description="SGN-E220814 [cLEL-22-N16](-)">
      <seq>ctttttctgatttgggtcctttgaaggataatgagcggaaggatttgaactatgctgtaaaggagtatttactattagcaggatatcgcttgactgcaatgacattattggaagaggtagtaattgattgaaaggggacttgctgatttcttgatgttcatcactaaactgaagaagaattgcattttattcaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0180C05.2" temp_strand="-" temp_description="C02HBa0180C05.2  AC215411.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0180C05 sequenced_by:kribb upload_account_name:korea">
        <position start="25040" stop="24245"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24740" g_stop="24546" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="195" r_length="195" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="196" polyA_stop="209"/>
      <MATCH_line gen_id="C02HBa0180C05.2" gen_strand="-" ref_id="SGN-E220814" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>195</cumulative_length_of_scored_exons>
        <coverage percentage="0.933" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0180C05.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E220814" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24740" e_stop="24546"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTTTCTGATTTGGGTCCTTTGAAGGATAATGAGCGGAAGGATTTGAACTATGCTGTAAAGGAGTATTTACTATTAGCAGGATATCGCTTGACTGCAATGACATTATTGGAAGAGGTAGTAATTGATTGAAAGGGGACTTGCTGATTTCTTGATGTTCATCACTAAACTGAAGAAGAATTGCATTTTATTCAAC</genome_strand>
        <mrna_strand>CTTTTTCTGATTTGGGTCCTTTGAAGGATAATGAGCGGAAGGATTTGAACTATGCTGTAAAGGAGTATTTACTATTAGCAGGATATCGCTTGACTGCAATGACATTATTGGAAGAGGTAGTAATTGATTGAAAGGGGACTTGCTGATTTCTTGATGTTCATCACTAAACTGAAGAAGAATTGCATTTTATTCAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E221216" ref_strand="+" ref_description="SGN-E221216 [cLEL-22-N16](-)">
      <seq>ctttttctgatttgggtcctttgaaggataatgagcggaaggatttgaactatgctgtaaaggagtatttactattagcaggatatcgcttgactgcaatgacattattggaagaggtagtaattgattgaaaggggacttgctgatttcttgatgttcatcactaaactgaagaagaattgcattttattcaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0180C05.2" temp_strand="-" temp_description="C02HBa0180C05.2  AC215411.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0180C05 sequenced_by:kribb upload_account_name:korea">
        <position start="25040" stop="24245"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24740" g_stop="24546" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="195" r_length="195" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="196" polyA_stop="209"/>
      <MATCH_line gen_id="C02HBa0180C05.2" gen_strand="-" ref_id="SGN-E221216" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>195</cumulative_length_of_scored_exons>
        <coverage percentage="0.933" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0180C05.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E221216" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24740" e_stop="24546"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTTTCTGATTTGGGTCCTTTGAAGGATAATGAGCGGAAGGATTTGAACTATGCTGTAAAGGAGTATTTACTATTAGCAGGATATCGCTTGACTGCAATGACATTATTGGAAGAGGTAGTAATTGATTGAAAGGGGACTTGCTGATTTCTTGATGTTCATCACTAAACTGAAGAAGAATTGCATTTTATTCAAC</genome_strand>
        <mrna_strand>CTTTTTCTGATTTGGGTCCTTTGAAGGATAATGAGCGGAAGGATTTGAACTATGCTGTAAAGGAGTATTTACTATTAGCAGGATATCGCTTGACTGCAATGACATTATTGGAAGAGGTAGTAATTGATTGAAAGGGGACTTGCTGATTTCTTGATGTTCATCACTAAACTGAAGAAGAATTGCATTTTATTCAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E545770" ref_strand="+" ref_description="SGN-E545770 [TUS-68-M16]">
      <seq>gaaaaagaagataaaactttcttgttttgctgattagacggagtgaagggtaagtaaatcattttgtgccactagattgatagttttgagttgccctcgaggaaaagacaagatttttgcttgtaatagcagccaatcatcaatagctttatccctcctcaatttttccttttatttcatggtttttttatggagctcatagcacctgctccaactggcaattccgacatcatttttctgatgtactttccaccaaccattagcagagcaatccagaaggaggggagagtttcatgaaagagagcttagggtcatcagttaaggcagccattgatttgtacaaaggaaattctgcaatgaaccaatcctcaattacaaagtctttagagaagccatatgcaagaaccagccaacttcacatagcaaaaaaggacatgggacgactcggtgagagcagaaaagttgcagaggtagaaaaagcccaagcagaaactgagcttttggacgcgaganagatggtgaaggagctaagttcaaggatagaagagttgaattcaagattaagtgtccagaatcaagatatggagaaactaaagacggcaaaaagagggggaaattgggggatgccacttcgncatcatcagaataatcagcactccaaagtagtagcagagttgggatatgcaaaagacaatctgattaagcttaaacaagatatggcttctatcatagaagaaaaaagaagggcagaagcagaaatagaacctctaatttgaaaatccat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0180C05.2" temp_strand="+" temp_description="C02HBa0180C05.2  AC215411.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0180C05 sequenced_by:kribb upload_account_name:korea">
        <position start="30589" stop="32162"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30887" g_stop="31147" g_length="261"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="266" r_length="266" r_score="0.893"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31148" i_stop="31272" i_length="125">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.446" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31273" g_stop="31395" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="267" r_stop="389" r_length="123" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="31396" i_stop="31467" i_length="72">
            <donor d_prob="0.993" d_score="0.98"/>
            <acceptor a_prob="0.795" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31468" g_stop="31863" g_length="396"/>
          <reference_exon_boundary r_type="cDNA" r_start="390" r_stop="784" r_length="395" r_score="0.960"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0180C05.2" gen_strand="+" ref_id="SGN-E545770" ref_strand="+">
        <total_alignment_score>0.942</total_alignment_score>
        <cumulative_length_of_scored_exons>780</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0180C05.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E545770" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30887" e_stop="31147"/>
          <exon e_start="31273" e_stop="31395"/>
          <exon e_start="31468" e_stop="31863"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAAAGACGATAAAACTTTCTTGTTTTGCTGATTAGACGGAGTGAAGGGTAAGTAAATCATTTTGTGCCACTAGATTGATAGTTTTGAGTTGCCCCTTGGAGGAAAAGACAAGATTTTTGCTTGTAATAGCAGCCAATCATCAATAGCTTTATCCCTCCTC-----CTCAATTT-TTCCCT-TTATTTTTATGGAGCTCATAGCACCTGCTCCAACTGGCAATTCCAACATCATTTTTCTGATGTACTTTCCACCAACCATTAGCAGCTTAAATTTACTCTGCTTCTAGCTATATTGTGCATATAGTTCTTCCACATATGTATATGAAGTTCCTAAGATTTTGCCTTAGCAGCAGACACAGCTCCATATTCTCTTTTGATGCCAATTTATAGAGCAATCCAGAAGGAGGGGAGAGTTTCATGAAAGAGAGCTTAGGGTCATCAGTTAAGGCAGCCATTGATTTGTACAAAGGAAATTCTGCAATGAACCAATCCTCAATTACCAAGTCTTTAGAGGTATACTACTATATTTTCATCCAACCATATTTGAGCGTGGACTAACCTTTGTGTTGCATACTCTTTTATCAGAAGCCATATGCAAGAACCAGCCAACTTCACATAGCAAAAAGGGACATGGGACGACTGGGTGAGAGCAGAAAAGTTGCAGAGGTAGAAAAAGCCCAAGCAGAAACTGAGCTTTTGGACGCGAGAAAGATGGTGAAGGAGCTAAGTTCAAGGATAGAAGAGTTGAATTCAAGATTAAGTGTCCAGAATCAAGATATGGAGAAACTAAAGACGGCAAAAAGAGGGGGAAATTGGGGGATGCCACTTCGCAATCATCAGAATAATCAGCACTCCAAAGTAGTAGCAGAGTTGGTATATGCAAAAGAAGATCTGATTAAGCTTAAACAAGATATGGCTTCTATCGTAGAAGAAAAAAGAAGGGCAGAGCAAGATATAGAAACCTCTAATTTGAAAATGCAA</genome_strand>
        <mrna_strand>GAAAAAGAAGATAAAACTTTCTTGTTTTGCTGATTAGACGGAGTGAAGGGTAAGTAAATCATTTTGTGCCACTAGATTGATAGTTTTGAGTTG-CCC-TCGAGGAAAAGACAAGATTTTTGCTTGTAATAGCAGCCAATCATCAATAGCTTTATCCCTCCTCAATTTTTCCTTTTATTTCATGGTTTTTTTATGGAGCTCATAGCACCTGCTCCAACTGGCAATTCCGACATCATTTTTCTGATGTACTTTCCACCAACCATTAGCAG.............................................................................................................................AGCAATCCAGAAGGAGGGGAGAGTTTCATGAAAGAGAGCTTAGGGTCATCAGTTAAGGCAGCCATTGATTTGTACAAAGGAAATTCTGCAATGAACCAATCCTCAATTACAAAGTCTTTAGAG........................................................................AAGCCATATGCAAGAACCAGCCAACTTCACATAGCAAAAAAGGACATGGGACGACTCGGTGAGAGCAGAAAAGTTGCAGAGGTAGAAAAAGCCCAAGCAGAAACTGAGCTTTTGGACGCGAGANAGATGGTGAAGGAGCTAAGTTCAAGGATAGAAGAGTTGAATTCAAGATTAAGTGTCCAGAATCAAGATATGGAGAAACTAAAGACGGCAAAAAGAGGGGGAAATTGGGGGATGCCACTTCGNCATCATCAGAATAATCAGCACTCCAAAGTAGTAGCAGAGTTGGGATATGCAAAAGACAATCTGATTAAGCTTAAACAAGATATGGCTTCTATCATAGAAGAAAAAAGAAGGGCAGAAGCAGAAATAG-AACCTCTAATTTGAAAATCCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E355706" ref_strand="+" ref_description="SGN-E355706 [cLHT-1-F15]">
      <seq>aaaaagaagataaaactttcttgttttgctgattagacggagtgaagggtaagtaaatcattttgtgccactagattgatagttttgagttgccctcgaggaaaagacaagatttttgcttgtaatagcagccaatcatcaatagctttatccctcctcaatttttccttttatttcatggtttttttatggagctcatagcacctgctccaactggcaattccgacatcatttttctgatgtactttccaccaaccattagcagagcaatccagaaggaggggagagtttcatgaaagagagcttagggtcatcagttaaggcagccattgatttgtacaaaggaaattctgcaatgaaccaatcctcaattacaaagtctttagagaagccatatgcaagaaccagccaacttcacatagcaaaaaaggacatgggacg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0180C05.2" temp_strand="+" temp_description="C02HBa0180C05.2  AC215411.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0180C05 sequenced_by:kribb upload_account_name:korea">
        <position start="30589" stop="31820"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30888" g_stop="31147" g_length="260"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="265" r_length="265" r_score="0.896"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31148" i_stop="31272" i_length="125">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.446" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31273" g_stop="31395" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="266" r_stop="388" r_length="123" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="31396" i_stop="31467" i_length="72">
            <donor d_prob="0.993" d_score="0.98"/>
            <acceptor a_prob="0.795" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31468" g_stop="31520" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="389" r_stop="441" r_length="53" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0180C05.2" gen_strand="+" ref_id="SGN-E355706" ref_strand="+">
        <total_alignment_score>0.933</total_alignment_score>
        <cumulative_length_of_scored_exons>436</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0180C05.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E355706" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30888" e_stop="31147"/>
          <exon e_start="31273" e_stop="31395"/>
          <exon e_start="31468" e_stop="31520"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAAGACGATAAAACTTTCTTGTTTTGCTGATTAGACGGAGTGAAGGGTAAGTAAATCATTTTGTGCCACTAGATTGATAGTTTTGAGTTGCCCCTTGGAGGAAAAGACAAGATTTTTGCTTGTAATAGCAGCCAATCATCAATAGCTTTATCCCTCCTC-----CTCAATTT-TTCCCT-TTATTTTTATGGAGCTCATAGCACCTGCTCCAACTGGCAATTCCAACATCATTTTTCTGATGTACTTTCCACCAACCATTAGCAGCTTAAATTTACTCTGCTTCTAGCTATATTGTGCATATAGTTCTTCCACATATGTATATGAAGTTCCTAAGATTTTGCCTTAGCAGCAGACACAGCTCCATATTCTCTTTTGATGCCAATTTATAGAGCAATCCAGAAGGAGGGGAGAGTTTCATGAAAGAGAGCTTAGGGTCATCAGTTAAGGCAGCCATTGATTTGTACAAAGGAAATTCTGCAATGAACCAATCCTCAATTACCAAGTCTTTAGAGGTATACTACTATATTTTCATCCAACCATATTTGAGCGTGGACTAACCTTTGTGTTGCATACTCTTTTATCAGAAGCCATATGCAAGAACCAGCCAACTTCACATAGCAAAAAGGGACATGGGACG</genome_strand>
        <mrna_strand>AAAAAGAAGATAAAACTTTCTTGTTTTGCTGATTAGACGGAGTGAAGGGTAAGTAAATCATTTTGTGCCACTAGATTGATAGTTTTGAGTTG-CCC-TCGAGGAAAAGACAAGATTTTTGCTTGTAATAGCAGCCAATCATCAATAGCTTTATCCCTCCTCAATTTTTCCTTTTATTTCATGGTTTTTTTATGGAGCTCATAGCACCTGCTCCAACTGGCAATTCCGACATCATTTTTCTGATGTACTTTCCACCAACCATTAGCAG.............................................................................................................................AGCAATCCAGAAGGAGGGGAGAGTTTCATGAAAGAGAGCTTAGGGTCATCAGTTAAGGCAGCCATTGATTTGTACAAAGGAAATTCTGCAATGAACCAATCCTCAATTACAAAGTCTTTAGAG........................................................................AAGCCATATGCAAGAACCAGCCAACTTCACATAGCAAAAAAGGACATGGGACG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E342381" ref_strand="+" ref_description="SGN-E342381 [cTOF-8-L22]">
      <seq>ctatattgtgcatatagttcttcacatatgtatatgaagttcctaagattttgccttagcagcagacacagctccatattctcttttgatgccaatttatagagcaatccagaaggaggggagagtttcatgaaagagagcttagggtcatcagttaaggcagccattgatttgtacaaaggaaattctgcaatgaaccaatcctcaattaccaagtctttagagaagccatatgcaagaaccagccaacttcacatagcaaaaagggacatgggacgactgggtgagagcagaaaagttgcagaggtagaaaaagcccaagcagaaactgagcttttggacgcgagaaagatggtgaaggagctaagttcaaggatagaagagttgaattcaagattaagtgtccagaatcaagatatggagaaactaaagacggcaaaaagagggggaaattgggggatgccacttcgcaatcatcagaataatcagcactccaaagtagtagcagagttggtatatgcaaaagaagatctgattaagcttaaacaagatatggcttctatcgtagaagaaaaaagaagggcagagcaagatatagaaacctctaatttgaaaatgcaatcttttgcangcaaagtgnaagcgttaagaaggnaagttgaggaacttaatgaagagctcgtggctagttgagctagctcgaatagaggcaatcaaagatacagagcaattgaagctcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0180C05.2" temp_strand="+" temp_description="C02HBa0180C05.2  AC215411.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0180C05 sequenced_by:kribb upload_account_name:korea">
        <position start="30870" stop="32283"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31170" g_stop="31395" g_length="226"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="225" r_length="225" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31396" i_stop="31467" i_length="72">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.795" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31468" g_stop="31983" g_length="516"/>
          <reference_exon_boundary r_type="cDNA" r_start="226" r_stop="741" r_length="516" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0180C05.2" gen_strand="+" ref_id="SGN-E342381" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>742</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0180C05.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E342381" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31170" e_stop="31395"/>
          <exon e_start="31468" e_stop="31983"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTATATTGTGCATATAGTTCTTCCACATATGTATATGAAGTTCCTAAGATTTTGCCTTAGCAGCAGACACAGCTCCATATTCTCTTTTGATGCCAATTTATAGAGCAATCCAGAAGGAGGGGAGAGTTTCATGAAAGAGAGCTTAGGGTCATCAGTTAAGGCAGCCATTGATTTGTACAAAGGAAATTCTGCAATGAACCAATCCTCAATTACCAAGTCTTTAGAGGTATACTACTATATTTTCATCCAACCATATTTGAGCGTGGACTAACCTTTGTGTTGCATACTCTTTTATCAGAAGCCATATGCAAGAACCAGCCAACTTCACATAGCAAAAAGGGACATGGGACGACTGGGTGAGAGCAGAAAAGTTGCAGAGGTAGAAAAAGCCCAAGCAGAAACTGAGCTTTTGGACGCGAGAAAGATGGTGAAGGAGCTAAGTTCAAGGATAGAAGAGTTGAATTCAAGATTAAGTGTCCAGAATCAAGATATGGAGAAACTAAAGACGGCAAAAAGAGGGGGAAATTGGGGGATGCCACTTCGCAATCATCAGAATAATCAGCACTCCAAAGTAGTAGCAGAGTTGGTATATGCAAAAGAAGATCTGATTAAGCTTAAACAAGATATGGCTTCTATCGTAGAAGAAAAAAGAAGGGCAGAGCAAGATATAGAAACCTCTAATTTGAAAATGCAATCTTTTGCAAGCAAAGTAGAAGCGTTAAGGAAGGAAGTTGAGGAACTTAATGAAGAGCTCGT-GCTAGTTGAGCTAGCTCGAATAGAGGCAATCAAAGAATACAGAGCAATTGAAGCTCAA</genome_strand>
        <mrna_strand>CTATATTGTGCATATAGTTCTT-CACATATGTATATGAAGTTCCTAAGATTTTGCCTTAGCAGCAGACACAGCTCCATATTCTCTTTTGATGCCAATTTATAGAGCAATCCAGAAGGAGGGGAGAGTTTCATGAAAGAGAGCTTAGGGTCATCAGTTAAGGCAGCCATTGATTTGTACAAAGGAAATTCTGCAATGAACCAATCCTCAATTACCAAGTCTTTAGAG........................................................................AAGCCATATGCAAGAACCAGCCAACTTCACATAGCAAAAAGGGACATGGGACGACTGGGTGAGAGCAGAAAAGTTGCAGAGGTAGAAAAAGCCCAAGCAGAAACTGAGCTTTTGGACGCGAGAAAGATGGTGAAGGAGCTAAGTTCAAGGATAGAAGAGTTGAATTCAAGATTAAGTGTCCAGAATCAAGATATGGAGAAACTAAAGACGGCAAAAAGAGGGGGAAATTGGGGGATGCCACTTCGCAATCATCAGAATAATCAGCACTCCAAAGTAGTAGCAGAGTTGGTATATGCAAAAGAAGATCTGATTAAGCTTAAACAAGATATGGCTTCTATCGTAGAAGAAAAAAGAAGGGCAGAGCAAGATATAGAAACCTCTAATTTGAAAATGCAATCTTTTGCANGCAAAGTGNAAGCGTTAAGAAGGNAAGTTGAGGAACTTAATGAAGAGCTCGTGGCTAGTTGAGCTAGCTCGAATAGAGGCAATCAAAG-ATACAGAGCAATTGAAGCTCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E740433" ref_strand="+" ref_description="SGN-E740433 [LC21BF10]">
      <seq>cgaagctttcagttcatgggttcaatggacgttgtgaggaatgagctcaaatgcatctcagaggaatcagctcgattaaagaaaaagggtaacaaggcagactcgacaattcagaacctcaacacgaagcttctgagggcaaaagccaaactggaagctgcatcccacaatgaaggaaaagcaacctctattgcttcaagtttattactcagtcttgaacaattgacaaatgaagctgaagaatctgagaaagaaagagacaatgccattgaggaagctgcaaaagtcgaagaagaaatacagaaaacacaatctgaaacagtgttggccgaggaaagatgggaagctgcaatacaagagcttgaaacaatcaaatcatcagaagctactgtcctaagaaacctaaaaagacttactgatgtaactatgaaaagtagagcatccgcttccacctccacaataactatttccagatttgagtatgagtacttaaaaggacgtgcaggacaggcagttgaaattgctgataagaaagttgaagcagctgaggcttgggtaaaagctttgcaagcaagtgaaaaggagatctcaatgaagacagaggtcatcagaaaggaaatccaagagcttaagatggaagaagagcaaaaaggcctgaaaatggagcattcaccttccgtaagaatgttggtcgatatgcagttgcagaaatgggaggagatacatggaaaagacctggagcaatctccgaacagttcacgtacaaaatccaaactcataagtggaaaaatgacaccagctagacgagctaagttcagaaagtcagcatctcctgcacctcgaacacctagagcttcttccttcgcggttagg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0180C05.2" temp_strand="+" temp_description="C02HBa0180C05.2  AC215411.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0180C05 sequenced_by:kribb upload_account_name:korea">
        <position start="31981" stop="33453"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32280" g_stop="33153" g_length="874"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="873" r_length="873" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0180C05.2" gen_strand="+" ref_id="SGN-E740433" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>874</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0180C05.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E740433" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32280" e_stop="33153"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGACAGCTTTCAGTTCATGGGTTCAATGGACGTTGTGAGGAATGAGCTCAAATGCATCTCAGAGGAATCAGCTCGATTAAAGAAAAAGGGTAACAAGGCAGACTCGACAATTCAGAACCTCAACACGAAGCTTCTGAGGGCAAAAGCCAAACTGGAAGCTGCATCCCACAATGAAGGAAAAGCAACCTCTATTGCTTCAAGTTTATTACTCAGTCTTGAACAATTGACAAATGAAGCTGAAGAATCTGAGAAAGAAAGAGACAATGCCATTGAGGAAGCTGCAAAAGTCGAAGAAGAAATACAGAAAACACAATCTGAAACAGTGTTGGCCGAGGAAAGATGGGAAGCTGCAATACAAGAGCTTGAAACAATCAAATCATCAGAAGCTACTGTCCTAAGAAACCTAAAAAGACTTACTGATGTAACTATGAAAAGTAGAGCATCCGCTTCCACCTCCACAATAACTATTTCCAGATTTGAGTATGAGTACTTAAAAGGACGTGCAGGACAGGCAGTTGAAATTGCTGATAAGAAAGTTGAAGCAGCTGAGGCTTGGGTAAAAGCTTTGCAAGCAAGTGAAAAGGAGATCTCAATGAAGACAGAGGTCATCAGAAAGGAAATCCAAGAGCTTAAGATGGAAGAAGAGCAAAAAGGCCTGAAAATGGAGCATTCACCTTCCGTAAGAATGTTGGTCGATATGCAGTTGCAGAAATGGGAGGAGATACATGGAAAAGACCTGGAGCAATCTCCGAACAGTTCACGTACAAAATCC-AACTCAATAAGTGGAAAAATGACACCAGCTAGACGAGCTAAGTTCAGAAAGTCAGCATCTCCTGCACCTCGAACACCTAGAGCTTCTTCCTTCGCGGTTAGG</genome_strand>
        <mrna_strand>CGA-AGCTTTCAGTTCATGGGTTCAATGGACGTTGTGAGGAATGAGCTCAAATGCATCTCAGAGGAATCAGCTCGATTAAAGAAAAAGGGTAACAAGGCAGACTCGACAATTCAGAACCTCAACACGAAGCTTCTGAGGGCAAAAGCCAAACTGGAAGCTGCATCCCACAATGAAGGAAAAGCAACCTCTATTGCTTCAAGTTTATTACTCAGTCTTGAACAATTGACAAATGAAGCTGAAGAATCTGAGAAAGAAAGAGACAATGCCATTGAGGAAGCTGCAAAAGTCGAAGAAGAAATACAGAAAACACAATCTGAAACAGTGTTGGCCGAGGAAAGATGGGAAGCTGCAATACAAGAGCTTGAAACAATCAAATCATCAGAAGCTACTGTCCTAAGAAACCTAAAAAGACTTACTGATGTAACTATGAAAAGTAGAGCATCCGCTTCCACCTCCACAATAACTATTTCCAGATTTGAGTATGAGTACTTAAAAGGACGTGCAGGACAGGCAGTTGAAATTGCTGATAAGAAAGTTGAAGCAGCTGAGGCTTGGGTAAAAGCTTTGCAAGCAAGTGAAAAGGAGATCTCAATGAAGACAGAGGTCATCAGAAAGGAAATCCAAGAGCTTAAGATGGAAGAAGAGCAAAAAGGCCTGAAAATGGAGCATTCACCTTCCGTAAGAATGTTGGTCGATATGCAGTTGCAGAAATGGGAGGAGATACATGGAAAAGACCTGGAGCAATCTCCGAACAGTTCACGTACAAAATCCAAACTC-ATAAGTGGAAAAATGACACCAGCTAGACGAGCTAAGTTCAGAAAGTCAGCATCTCCTGCACCTCGAACACCTAGAGCTTCTTCCTTCGCGGTTAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E740548" ref_strand="+" ref_description="SGN-E740548 [LC21DF10]">
      <seq>catatctttcagttcatgggttcaatggacgttgtgaggaatgagctcaaatgcatctcagaggaatcagctcgattaaagaaaaagggtaacaaggcagactcgacaattcagaacctcaacacgaagcttctgagggcaaaagccaaactggaagctgcatcccacaatgaaggaaaagcaacctctattgcttcaagtttattactcagtcttgaacaattgacaaatgaagctgaagaatctgagaaagaaagagacaatgccattgaggaagctgcaaaagtcgaagaagaaatacagaaaacacaatctgaaacagtgttggccgaggaaagatgggaagctgcaatacaagagcttgaaacaatcaaatcatcagaagctactgtcctaagaaacctaaaaagacttactgatgtaactatgaaaagtagagcatccgcttccacctccacaataactatttccagatttgagtatgagtacttaaaaggacgtgcaggacaggcagttgaaattgctgataagaaagttgaagcagctgaggcttgggtaaaagctttgcaagcaagtgaaaaggagatctcaatgaagacagaggtcatcagaaaggaaatccaagagcttaagatggaagaagagcaaaaaggcctgaaaatggagcattcaccttccgtaagaatgttggtcgatatgcaattgccgaaatgggaggagatacatggaaaagacctggagcaatctccgaacagttcacgtaacaaaatccaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0180C05.2" temp_strand="+" temp_description="C02HBa0180C05.2  AC215411.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0180C05 sequenced_by:kribb upload_account_name:korea">
        <position start="31982" stop="33354"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32281" g_stop="33054" g_length="774"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="775" r_length="775" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0180C05.2" gen_strand="+" ref_id="SGN-E740548" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>774</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0180C05.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E740548" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32281" e_stop="33054"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACAGCTTTCAGTTCATGGGTTCAATGGACGTTGTGAGGAATGAGCTCAAATGCATCTCAGAGGAATCAGCTCGATTAAAGAAAAAGGGTAACAAGGCAGACTCGACAATTCAGAACCTCAACACGAAGCTTCTGAGGGCAAAAGCCAAACTGGAAGCTGCATCCCACAATGAAGGAAAAGCAACCTCTATTGCTTCAAGTTTATTACTCAGTCTTGAACAATTGACAAATGAAGCTGAAGAATCTGAGAAAGAAAGAGACAATGCCATTGAGGAAGCTGCAAAAGTCGAAGAAGAAATACAGAAAACACAATCTGAAACAGTGTTGGCCGAGGAAAGATGGGAAGCTGCAATACAAGAGCTTGAAACAATCAAATCATCAGAAGCTACTGTCCTAAGAAACCTAAAAAGACTTACTGATGTAACTATGAAAAGTAGAGCATCCGCTTCCACCTCCACAATAACTATTTCCAGATTTGAGTATGAGTACTTAAAAGGACGTGCAGGACAGGCAGTTGAAATTGCTGATAAGAAAGTTGAAGCAGCTGAGGCTTGGGTAAAAGCTTTGCAAGCAAGTGAAAAGGAGATCTCAATGAAGACAGAGGTCATCAGAAAGGAAATCCAAGAGCTTAAGATGGAAGAAGAGCAAAAAGGCCTGAAAATGGAGCATTCACCTTCCGTAAGAATGTTGGTCGATATGCAGTTGCAGAAATGGGAGGAGATACATGGAAAAGACCTGGAGCAATCTCCGAACAGTTCACGT-ACAAAATCCAAC</genome_strand>
        <mrna_strand>CATATCTTTCAGTTCATGGGTTCAATGGACGTTGTGAGGAATGAGCTCAAATGCATCTCAGAGGAATCAGCTCGATTAAAGAAAAAGGGTAACAAGGCAGACTCGACAATTCAGAACCTCAACACGAAGCTTCTGAGGGCAAAAGCCAAACTGGAAGCTGCATCCCACAATGAAGGAAAAGCAACCTCTATTGCTTCAAGTTTATTACTCAGTCTTGAACAATTGACAAATGAAGCTGAAGAATCTGAGAAAGAAAGAGACAATGCCATTGAGGAAGCTGCAAAAGTCGAAGAAGAAATACAGAAAACACAATCTGAAACAGTGTTGGCCGAGGAAAGATGGGAAGCTGCAATACAAGAGCTTGAAACAATCAAATCATCAGAAGCTACTGTCCTAAGAAACCTAAAAAGACTTACTGATGTAACTATGAAAAGTAGAGCATCCGCTTCCACCTCCACAATAACTATTTCCAGATTTGAGTATGAGTACTTAAAAGGACGTGCAGGACAGGCAGTTGAAATTGCTGATAAGAAAGTTGAAGCAGCTGAGGCTTGGGTAAAAGCTTTGCAAGCAAGTGAAAAGGAGATCTCAATGAAGACAGAGGTCATCAGAAAGGAAATCCAAGAGCTTAAGATGGAAGAAGAGCAAAAAGGCCTGAAAATGGAGCATTCACCTTCCGTAAGAATGTTGGTCGATATGCAATTGCCGAAATGGGAGGAGATACATGGAAAAGACCTGGAGCAATCTCCGAACAGTTCACGTAACAAAATCCAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E732861" ref_strand="+" ref_description="SGN-E732861 [LB03BD05]">
      <seq>attgcttcaagtttattactcagtcttgaacaattgacaaatgaagctgaagaatctgagaaagaaagagacaatgccattgaggaagctgcaaaagtcgaagaagaaatacagaaaacacaatctgaaacagtgttggccgaggaaagatgggaagctgcaatacaagagcttgaaacaatcaaatcatcagaagctactgtcctaagaaacctaaaaagacttactgatgtaactatgaaaagtagagcatccgcttccacctccacaataactatttccagatttgagtatgagtacttaaaaggacgtgcaggacaggcagttgaaattgctgataagaaagttgaagcagctgaggcttgggtaaaagctttgcaagcaagtgaaaaggagatctcaatgaagacagaggtcatcagaaaggaaatccaagagcttaagatggaagaagagcaaaaaggcctgaaaatggagcattcaccttccgtaagaatgttggtcgatatgcagttgcagaaatgggaggagatacatggaaaagacctggagcaatctccgaacagttcacgtacaaaatccaactcaataagtggaaaaatgacaccagctagacgagctaagttcagaaagtcagcatctcctgcacctcgaacacctagagcttcttccttcgcggttaggagaagaagaaaggtaataccaaacatagctaagttatttattagcaagagcaatgatgaaaacctgtaagctatattattgcagctgcaaatacttgccaaagttttctgatgtaaaagatatgatcccactanaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0180C05.2" temp_strand="+" temp_description="C02HBa0180C05.2  AC215411.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0180C05 sequenced_by:kribb upload_account_name:korea">
        <position start="32170" stop="33588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32470" g_stop="33295" g_length="826"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="826" r_length="826" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0180C05.2" gen_strand="+" ref_id="SGN-E732861" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>826</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0180C05.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E732861" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32470" e_stop="33295"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTGCTTCAAGTTTATTACTCAGTCTTGAACAATTGACAAATGAAGCTGAAGAATCTGAGAAAGAAAGAGACAATGCCATTGAGGAAGCTGCAAAAGTCGAAGAAGAAATACAGAAAACACAATCTGAAACAGTGTTGGCCGAGGAAAGATGGGAAGCTGCAATACAAGAGCTTGAAACAATCAAATCATCAGAAGCTACTGTCCTAAGAAACCTAAAAAGACTTACTGATGTAACTATGAAAAGTAGAGCATCCGCTTCCACCTCCACAATAACTATTTCCAGATTTGAGTATGAGTACTTAAAAGGACGTGCAGGACAGGCAGTTGAAATTGCTGATAAGAAAGTTGAAGCAGCTGAGGCTTGGGTAAAAGCTTTGCAAGCAAGTGAAAAGGAGATCTCAATGAAGACAGAGGTCATCAGAAAGGAAATCCAAGAGCTTAAGATGGAAGAAGAGCAAAAAGGCCTGAAAATGGAGCATTCACCTTCCGTAAGAATGTTGGTCGATATGCAGTTGCAGAAATGGGAGGAGATACATGGAAAAGACCTGGAGCAATCTCCGAACAGTTCACGTACAAAATCCAACTCAATAAGTGGAAAAATGACACCAGCTAGACGAGCTAAGTTCAGAAAGTCAGCATCTCCTGCACCTCGAACACCTAGAGCTTCTTCCTTCGCGGTTAGGAGAAGAAGAAAGGTAATACCAAACATAGCTAAGTTATTTATTAGCAAGAGCAATGATGAAAACCTGTAAGCTATATTATTGCAGCTGCAAATACTTGCCAAAGTTTTCTGATGTAAAAGATATGATCCCACTAAATCCTAGT</genome_strand>
        <mrna_strand>ATTGCTTCAAGTTTATTACTCAGTCTTGAACAATTGACAAATGAAGCTGAAGAATCTGAGAAAGAAAGAGACAATGCCATTGAGGAAGCTGCAAAAGTCGAAGAAGAAATACAGAAAACACAATCTGAAACAGTGTTGGCCGAGGAAAGATGGGAAGCTGCAATACAAGAGCTTGAAACAATCAAATCATCAGAAGCTACTGTCCTAAGAAACCTAAAAAGACTTACTGATGTAACTATGAAAAGTAGAGCATCCGCTTCCACCTCCACAATAACTATTTCCAGATTTGAGTATGAGTACTTAAAAGGACGTGCAGGACAGGCAGTTGAAATTGCTGATAAGAAAGTTGAAGCAGCTGAGGCTTGGGTAAAAGCTTTGCAAGCAAGTGAAAAGGAGATCTCAATGAAGACAGAGGTCATCAGAAAGGAAATCCAAGAGCTTAAGATGGAAGAAGAGCAAAAAGGCCTGAAAATGGAGCATTCACCTTCCGTAAGAATGTTGGTCGATATGCAGTTGCAGAAATGGGAGGAGATACATGGAAAAGACCTGGAGCAATCTCCGAACAGTTCACGTACAAAATCCAACTCAATAAGTGGAAAAATGACACCAGCTAGACGAGCTAAGTTCAGAAAGTCAGCATCTCCTGCACCTCGAACACCTAGAGCTTCTTCCTTCGCGGTTAGGAGAAGAAGAAAGGTAATACCAAACATAGCTAAGTTATTTATTAGCAAGAGCAATGATGAAAACCTGTAAGCTATATTATTGCAGCTGCAAATACTTGCCAAAGTTTTCTGATGTAAAAGATATGATCCCACTANAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E545769" ref_strand="+" ref_description="SGN-E545769 [TUS-68-M16](-)">
      <seq>aaagaaagagtgaatgccattgaggaagctgcaaaagtcgagaaagaaattcagaaaacacaatctgaaacagtattggccgaggaaagatgggaagctgcaatacaagagcttgaaacaatcaaatcatcagaagctactgccctaagcaacctaaaaagacttactgatgtaactatgaaaagtagagcatccgcttccacctccacaataactatttccagatttgagtatgagtacttaaaaggacgtgcaggacaggcagttgaaattgctgataagaaagttgaagcagctgaggcttgggtaaaagctttgcaagcaagtgaaaaggagatctcaatgaagacagaggtcatcagaaaggaaatccaagagcttaagatggaagaagagcaaaaaggcctgaaaatggagcattcaccttctgtaagaatgttggtcgatatgcagttgcagaaatgggaggagatacatggaaaagacctggagcaatctcagaacagttcacgtacaaaatccaactcaataagtggaaaaatgacaccagcaagacgagctaagttcagaaagtcagcatctcctgcacctcgaacacctagagcttcttccttcgcggttaggagaagaagaaagttaataccaaacatagctaagttatttattagcaagagcaatgatgagaacctgtaagctatattattgcagctgcaaatacttgccaaagttttctgatgtaaaagatataatcccactaaaaacaaaaaaagaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0180C05.2" temp_strand="+" temp_description="C02HBa0180C05.2  AC215411.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0180C05 sequenced_by:kribb upload_account_name:korea">
        <position start="32230" stop="33593"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32530" g_stop="33287" g_length="758"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="758" r_length="758" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="759" polyA_stop="769"/>
      <MATCH_line gen_id="C02HBa0180C05.2" gen_strand="+" ref_id="SGN-E545769" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>758</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0180C05.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E545769" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32530" e_stop="33287"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGAAAGAGACAATGCCATTGAGGAAGCTGCAAAAGTCGAAGAAGAAATACAGAAAACACAATCTGAAACAGTGTTGGCCGAGGAAAGATGGGAAGCTGCAATACAAGAGCTTGAAACAATCAAATCATCAGAAGCTACTGTCCTAAGAAACCTAAAAAGACTTACTGATGTAACTATGAAAAGTAGAGCATCCGCTTCCACCTCCACAATAACTATTTCCAGATTTGAGTATGAGTACTTAAAAGGACGTGCAGGACAGGCAGTTGAAATTGCTGATAAGAAAGTTGAAGCAGCTGAGGCTTGGGTAAAAGCTTTGCAAGCAAGTGAAAAGGAGATCTCAATGAAGACAGAGGTCATCAGAAAGGAAATCCAAGAGCTTAAGATGGAAGAAGAGCAAAAAGGCCTGAAAATGGAGCATTCACCTTCCGTAAGAATGTTGGTCGATATGCAGTTGCAGAAATGGGAGGAGATACATGGAAAAGACCTGGAGCAATCTCCGAACAGTTCACGTACAAAATCCAACTCAATAAGTGGAAAAATGACACCAGCTAGACGAGCTAAGTTCAGAAAGTCAGCATCTCCTGCACCTCGAACACCTAGAGCTTCTTCCTTCGCGGTTAGGAGAAGAAGAAAGGTAATACCAAACATAGCTAAGTTATTTATTAGCAAGAGCAATGATGAAAACCTGTAAGCTATATTATTGCAGCTGCAAATACTTGCCAAAGTTTTCTGATGTAAAAGATATGATCCCACTAA</genome_strand>
        <mrna_strand>AAAGAAAGAGTGAATGCCATTGAGGAAGCTGCAAAAGTCGAGAAAGAAATTCAGAAAACACAATCTGAAACAGTATTGGCCGAGGAAAGATGGGAAGCTGCAATACAAGAGCTTGAAACAATCAAATCATCAGAAGCTACTGCCCTAAGCAACCTAAAAAGACTTACTGATGTAACTATGAAAAGTAGAGCATCCGCTTCCACCTCCACAATAACTATTTCCAGATTTGAGTATGAGTACTTAAAAGGACGTGCAGGACAGGCAGTTGAAATTGCTGATAAGAAAGTTGAAGCAGCTGAGGCTTGGGTAAAAGCTTTGCAAGCAAGTGAAAAGGAGATCTCAATGAAGACAGAGGTCATCAGAAAGGAAATCCAAGAGCTTAAGATGGAAGAAGAGCAAAAAGGCCTGAAAATGGAGCATTCACCTTCTGTAAGAATGTTGGTCGATATGCAGTTGCAGAAATGGGAGGAGATACATGGAAAAGACCTGGAGCAATCTCAGAACAGTTCACGTACAAAATCCAACTCAATAAGTGGAAAAATGACACCAGCAAGACGAGCTAAGTTCAGAAAGTCAGCATCTCCTGCACCTCGAACACCTAGAGCTTCTTCCTTCGCGGTTAGGAGAAGAAGAAAGTTAATACCAAACATAGCTAAGTTATTTATTAGCAAGAGCAATGATGAGAACCTGTAAGCTATATTATTGCAGCTGCAAATACTTGCCAAAGTTTTCTGATGTAAAAGATATAATCCCACTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E421042" ref_strand="+" ref_description="SGN-E421042 [STM-32-M11]">
      <seq>tttttttttttttatggtaaaacaacacactgttattcatcacatatattctgatgcacacaaacaaaaacagctactttcagtcttcaccattgtttaactttcttcaatattttctctttttgggtgttgatgtattcagagtatgggtattgtcctaacaaatattaaataaagagacaaacaaactacacaagaaaaacttatggtttatgtgcctcaaacaacatgaaagaataaatcttaaaatttgtgaactataacaaaagatgatcccactatcaaaacttttgatcttcttttcacagcctcactgaggatgtgatggtgcctggttcattacattgttactgtgcatctgcatggaagactctgacagtaatactgctgccccctttgtaatgttttggcactgggaaatgaaagaaggtggaggaggctgagatttatatatctgattgtatgcaagatcatcgtcaaactcatttgcatcatttgcagcaggaactgatgcagttgagacagg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0180C05.2" temp_strand="+" temp_description="C02HBa0180C05.2  AC215411.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0180C05 sequenced_by:kribb upload_account_name:korea">
        <position start="33562" stop="34661"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33838" g_stop="34361" g_length="524"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="526" r_length="526" r_score="0.939"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0180C05.2" gen_strand="+" ref_id="SGN-E421042" ref_strand="+">
        <total_alignment_score>0.939</total_alignment_score>
        <cumulative_length_of_scored_exons>524</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0180C05.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E421042" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33838" e_stop="34361"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGACAGATATTTATGGTAAAAC-TCACACTGTTATTCATCACATGTATTCTGA-GCAAACAAACAAAAACAACTACTTTCAGTCTTCACCACTGTTTAACTTTCTTCAAT-TTTTCTATTTTTTGGGTGTCGATGTATTCAGAGTATGGGGATTGTCCTAACAAATATTAAATAAAGAGACAAACAAACTACACAAGAAAATCTTATGGTTTATGTGCCTCAAACGACATGAAAGAATAAATCTTAAAATTTGTGAACTATAACAAAAGATGATCCCACTATCAAAACTTTTGATCTTATTGTCGTAGCCTCACTGAGGATGTGATGGTGCCTGGTTCATGACATTGTTACTGTGCATCTGCATGGAAGACTCTGACAGTAATACTGCCGCCCCCTTTGTAATGGTTTGGCACTGGGAAATGAAAGAAGGTGGAGGAGGCTGAGATTTATATATCTGATTGTATGCAAGATCATCGTCAAACTCATTTGCATCATTTGCAGCAGGAACTGATGCAGTTGAGACAGG</genome_strand>
        <mrna_strand>TTTTTTTTTTTTTATGGTAAAACAACACACTGTTATTCATCACATATATTCTGATGCACACAAACAAAAACAGCTACTTTCAGTCTTCACCATTGTTTAACTTTCTTCAATATTTTCT-CTTTTTGGGTGTTGATGTATTCAGAGTATGGGTATTGTCCTAACAAATATTAAATAAAGAGACAAACAAACTACACAAGAAAAACTTATGGTTTATGTGCCTCAAACAACATGAAAGAATAAATCTTAAAATTTGTGAACTATAACAAAAGATGATCCCACTATCAAAACTTTTGATCTTCTTTTCACAGCCTCACTGAGGATGTGATGGTGCCTGGTTCATTACATTGTTACTGTGCATCTGCATGGAAGACTCTGACAGTAATACTGCTGCCCCCTTTGTAATGTTTTGGCACTGGGAAATGAAAGAAGGTGGAGGAGGCTGAGATTTATATATCTGATTGTATGCAAGATCATCGTCAAACTCATTTGCATCATTTGCAGCAGGAACTGATGCAGTTGAGACAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E407172" ref_strand="+" ref_description="SGN-E407172 [PPI-6-C4]">
      <seq>cctgtctcaactgcatcagttcctgctgcaaatgatgcaaatgagtttgacgatgatcttgcatacaatcagatatataaatctcagcctcctccaccttctttcatttcccagtgccaaaacattacaaagggggcagcagtattactgtcagagtcttccatgcagatgcacagtaacaatgtaatgaaccaggcaccatcacatcctcagtgaggctgtgaaaagaagatcaaaagttttgatagtgggatcatcttttgttatagttcacaaattttaagatttattctttcatgttgtttgaggcacataaaccataagtttttcttgtgtagtttgtttgtctctttatttaatatttgttaggacaatacccatactctgaatacatcaacacccaaaaagagaaaatattgaagaaagttaaacaatggtgaagactgaaagtagctgtttttgtttgtgtgcatcagaatatatgtgatgaataacagtgtgttttgttttaccataaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0180C05.2" temp_strand="-" temp_description="C02HBa0180C05.2  AC215411.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0180C05 sequenced_by:kribb upload_account_name:korea">
        <position start="34661" stop="33556"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34361" g_stop="33861" g_length="501"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="502" r_length="502" r_score="0.956"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="514" polyA_stop="528"/>
      <MATCH_line gen_id="C02HBa0180C05.2" gen_strand="-" ref_id="SGN-E407172" ref_strand="+">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>501</cumulative_length_of_scored_exons>
        <coverage percentage="0.949" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0180C05.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E407172" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34361" e_stop="33861"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTGTCTCAACTGCATCAGTTCCTGCTGCAAATGATGCAAATGAGTTTGACGATGATCTTGCATACAATCAGATATATAAATCTCAGCCTCCTCCACCTTCTTTCATTTCCCAGTGCCAAACCATTACAAAGGGGGCGGCAGTATTACTGTCAGAGTCTTCCATGCAGATGCACAGTAACAATGTCATGAACCAGGCACCATCACATCCTCAGTGAGGCTACGACAATAAGATCAAAAGTTTTGATAGTGGGATCATCTTTTGTTATAGTTCACAAATTTTAAGATTTATTCTTTCATGTCGTTTGAGGCACATAAACCATAAGATTTTCTTGTGTAGTTTGTTTGTCTCTTTATTTAATATTTGTTAGGACAATCCCCATACTCTGAATACATCGACACCCAAAAAATAGAAAA-ATTGAAGAAAGTTAAACAGTGGTGAAGACTGAAAGTAGTTGTTTTTGTTTGTTTGC-TCAGAATACATGTGATGAATAACAGTGTGA</genome_strand>
        <mrna_strand>CCTGTCTCAACTGCATCAGTTCCTGCTGCAAATGATGCAAATGAGTTTGACGATGATCTTGCATACAATCAGATATATAAATCTCAGCCTCCTCCACCTTCTTTCATTTCCCAGTGCCAAAACATTACAAAGGGGGCAGCAGTATTACTGTCAGAGTCTTCCATGCAGATGCACAGTAACAATGTAATGAACCAGGCACCATCACATCCTCAGTGAGGCTGTGAAAAGAAGATCAAAAGTTTTGATAGTGGGATCATCTTTTGTTATAGTTCACAAATTTTAAGATTTATTCTTTCATGTTGTTTGAGGCACATAAACCATAAGTTTTTCTTGTGTAGTTTGTTTGTCTCTTTATTTAATATTTGTTAGGACAATACCCATACTCTGAATACATCAACACCC-AAAAAGAGAAAATATTGAAGAAAGTTAAACAATGGTGAAGACTGAAAGTAGCTGTTTTTGTTTGTGTGCATCAGAATATATGTGATGAATAACAGTGTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E421041" ref_strand="+" ref_description="SGN-E421041 [STM-32-M11]">
      <seq>cctgtctcaactgcatcagttcctgctgcaaatgatgcaaatgagtttgacgatgatcttgcatacaatcagatatataaatctcagcctcctccaccttctttcatttcccagtgccaaaacattacaaagggggcagcagtattactgtcagagtcttccatgcagatgcacagtaacaatgtaatgaaccaggcaccatcacatcctcagtgaggctgtgaaaagaagatcaaaagttttgatagtgggatcatcttttgttatagttcacaaattttaagatttattctttcatgttgtttgaggcacataaaccataagtttttcttgtgtagtttgtttgtctctttatttaatatttgttaggacaatacccatactctgaatacatcaacacccaaaaagagaaaatattgaagaaagttaaacaatggtgaagactgaaagtagctgtttttgtttgtgtgcatcagaatatatgtgatgaataacagtgtgtttgttttaccataaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0180C05.2" temp_strand="-" temp_description="C02HBa0180C05.2  AC215411.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0180C05 sequenced_by:kribb upload_account_name:korea">
        <position start="34661" stop="33546"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34361" g_stop="33861" g_length="501"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="502" r_length="502" r_score="0.956"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="513" polyA_stop="527"/>
      <MATCH_line gen_id="C02HBa0180C05.2" gen_strand="-" ref_id="SGN-E421041" ref_strand="+">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>501</cumulative_length_of_scored_exons>
        <coverage percentage="0.951" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0180C05.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E421041" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34361" e_stop="33861"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTGTCTCAACTGCATCAGTTCCTGCTGCAAATGATGCAAATGAGTTTGACGATGATCTTGCATACAATCAGATATATAAATCTCAGCCTCCTCCACCTTCTTTCATTTCCCAGTGCCAAACCATTACAAAGGGGGCGGCAGTATTACTGTCAGAGTCTTCCATGCAGATGCACAGTAACAATGTCATGAACCAGGCACCATCACATCCTCAGTGAGGCTACGACAATAAGATCAAAAGTTTTGATAGTGGGATCATCTTTTGTTATAGTTCACAAATTTTAAGATTTATTCTTTCATGTCGTTTGAGGCACATAAACCATAAGATTTTCTTGTGTAGTTTGTTTGTCTCTTTATTTAATATTTGTTAGGACAATCCCCATACTCTGAATACATCGACACCCAAAAAATAGAAAA-ATTGAAGAAAGTTAAACAGTGGTGAAGACTGAAAGTAGTTGTTTTTGTTTGTTTGC-TCAGAATACATGTGATGAATAACAGTGTGA</genome_strand>
        <mrna_strand>CCTGTCTCAACTGCATCAGTTCCTGCTGCAAATGATGCAAATGAGTTTGACGATGATCTTGCATACAATCAGATATATAAATCTCAGCCTCCTCCACCTTCTTTCATTTCCCAGTGCCAAAACATTACAAAGGGGGCAGCAGTATTACTGTCAGAGTCTTCCATGCAGATGCACAGTAACAATGTAATGAACCAGGCACCATCACATCCTCAGTGAGGCTGTGAAAAGAAGATCAAAAGTTTTGATAGTGGGATCATCTTTTGTTATAGTTCACAAATTTTAAGATTTATTCTTTCATGTTGTTTGAGGCACATAAACCATAAGTTTTTCTTGTGTAGTTTGTTTGTCTCTTTATTTAATATTTGTTAGGACAATACCCATACTCTGAATACATCAACACCC-AAAAAGAGAAAATATTGAAGAAAGTTAAACAATGGTGAAGACTGAAAGTAGCTGTTTTTGTTTGTGTGCATCAGAATATATGTGATGAATAACAGTGTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E427945" ref_strand="+" ref_description="SGN-E427945 [STM-49-I24]">
      <seq>tttttattgtcctaactcaacccaaataaagagacaaacaaactacacaagaaaaacttatggtttatgtgcctcaaacaacatgaaagaataaatcttaaaatttgtgaactataacaaaagatgatcccactatcaaaacttttgatcttcttttcacagcctcactgaggatgtgatggtgcctggttcattacattgttactgtgcatctgcatggaagactctgacagtaatactgctgccccctttgtaatgttttggcactgggaaatgaaagaaggtggaggaggctgagatttatatatctgattgtatgcaagatcatcgtcaaactcatttgcatcatttgcagcaggaactgatgcagttgagacaggttgggaaataagctgtggttcaggaaggacagtatattgttgctgagtctgagaaggcgcactaatgggtagtgatgctgttgggacagtcgtgtacacttttgaacccgactcaggcactgattgagccgccatgacctccttataagctactgatggagggtttatgacactttgtggatgcaagggtggccgattggacgccattactgctgcatgattaatgttgggcaacactgacatactgtgagattgcatttgctgcataggaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0180C05.2" temp_strand="+" temp_description="C02HBa0180C05.2  AC215411.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0180C05 sequenced_by:kribb upload_account_name:korea">
        <position start="33705" stop="34934"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33982" g_stop="34634" g_length="653"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="653" r_length="653" r_score="0.959"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0180C05.2" gen_strand="+" ref_id="SGN-E427945" ref_strand="+">
        <total_alignment_score>0.959</total_alignment_score>
        <cumulative_length_of_scored_exons>653</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0180C05.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E427945" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33982" e_stop="34634"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGGGATTGTCCTAACAAATATTAAATAAAGAGACAAACAAACTACACAAGAAAATCTTATGGTTTATGTGCCTCAAACGACATGAAAGAATAAATCTTAAAATTTGTGAACTATAACAAAAGATGATCCCACTATCAAAACTTTTGATCTTATTGTCGTAGCCTCACTGAGGATGTGATGGTGCCTGGTTCATGACATTGTTACTGTGCATCTGCATGGAAGACTCTGACAGTAATACTGCCGCCCCCTTTGTAATGGTTTGGCACTGGGAAATGAAAGAAGGTGGAGGAGGCTGAGATTTATATATCTGATTGTATGCAAGATCATCGTCAAACTCATTTGCATCATTTGCAGCAGGAACTGATGCAGTTGAGACAGGTTGGGAAGTAAGCTGTGGTTCAGGAAGGACAGTATATTGTTGCTGAGTCTGAGAAGGCGCACTAATGGGTAGTGATGCTGTTGGGACAGTCGTGTACACTTTTGGACCTGACTCAGGCACTGATTGAGCCGCCATGACCTCCTTATAAGCTACTGATGGAGGGTTTATGACACTTTGTGAATGCAAGGGTGGCCGATTGGACGCCATCACTGCTGCATGATTAATGTTGGGCAGTACTGACATACTGTGAGATTGCATTTGCTGCACAGGAAC</genome_strand>
        <mrna_strand>TTTTTATTGTCCTAACTCAACCCAAATAAAGAGACAAACAAACTACACAAGAAAAACTTATGGTTTATGTGCCTCAAACAACATGAAAGAATAAATCTTAAAATTTGTGAACTATAACAAAAGATGATCCCACTATCAAAACTTTTGATCTTCTTTTCACAGCCTCACTGAGGATGTGATGGTGCCTGGTTCATTACATTGTTACTGTGCATCTGCATGGAAGACTCTGACAGTAATACTGCTGCCCCCTTTGTAATGTTTTGGCACTGGGAAATGAAAGAAGGTGGAGGAGGCTGAGATTTATATATCTGATTGTATGCAAGATCATCGTCAAACTCATTTGCATCATTTGCAGCAGGAACTGATGCAGTTGAGACAGGTTGGGAAATAAGCTGTGGTTCAGGAAGGACAGTATATTGTTGCTGAGTCTGAGAAGGCGCACTAATGGGTAGTGATGCTGTTGGGACAGTCGTGTACACTTTTGAACCCGACTCAGGCACTGATTGAGCCGCCATGACCTCCTTATAAGCTACTGATGGAGGGTTTATGACACTTTGTGGATGCAAGGGTGGCCGATTGGACGCCATTACTGCTGCATGATTAATGTTGGGCAACACTGACATACTGTGAGATTGCATTTGCTGCATAGGAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E319310" ref_strand="+" ref_description="SGN-E319310 [cTOB-16-H18]">
      <seq>tgttatccattttatcaggttcccatgcagcagccacaacaaactccttatcctctgaatcaacaatacccaatatacttggttcctgtgcagcaaatgcaatctcacagtatgtcagtactgcccaacattaatcatgcagcagtgatggcgtccaatcggccacccttgcattcacaaagtgtcataaaccctccatcagtagcttataaggaggtcatggcggctcaatcagtgcctgagtcaggtccaaaagtgtacacgactgtcccaacagcatcactacccattagtgcgccttctcagactcagcaacaatatactgtccttcctgaaccacagcttacttcccaacctgtctcaactgcatcagttcctgctgcaaatgatgcaaatgagtttgacgatgatcttgcatacaatcagatatataaatctcagcctcctccaccttctttcatttcccagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0180C05.2" temp_strand="-" temp_description="C02HBa0180C05.2  AC215411.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0180C05 sequenced_by:kribb upload_account_name:korea">
        <position start="35015" stop="33947"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34715" g_stop="34247" g_length="469"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="469" r_length="469" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0180C05.2" gen_strand="-" ref_id="SGN-E319310" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>469</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0180C05.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E319310" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34715" e_stop="34247"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTTATCCATTTTATCAGGTTCCCATGCAGCAGCCACAACAAACTCCTTATCCTCTGAATCAACAATACCCAATATACTTGGTTCCTGTGCAGCAAATGCAATCTCACAGTATGTCAGTACTGCCCAACATTAATCATGCAGCAGTGATGGCGTCCAATCGGCCACCCTTGCATTCACAAAGTGTCATAAACCCTCCATCAGTAGCTTATAAGGAGGTCATGGCGGCTCAATCAGTGCCTGAGTCAGGTCCAAAAGTGTACACGACTGTCCCAACAGCATCACTACCCATTAGTGCGCCTTCTCAGACTCAGCAACAATATACTGTCCTTCCTGAACCACAGCTTACTTCCCAACCTGTCTCAACTGCATCAGTTCCTGCTGCAAATGATGCAAATGAGTTTGACGATGATCTTGCATACAATCAGATATATAAATCTCAGCCTCCTCCACCTTCTTTCATTTCCCAGT</genome_strand>
        <mrna_strand>TGTTATCCATTTTATCAGGTTCCCATGCAGCAGCCACAACAAACTCCTTATCCTCTGAATCAACAATACCCAATATACTTGGTTCCTGTGCAGCAAATGCAATCTCACAGTATGTCAGTACTGCCCAACATTAATCATGCAGCAGTGATGGCGTCCAATCGGCCACCCTTGCATTCACAAAGTGTCATAAACCCTCCATCAGTAGCTTATAAGGAGGTCATGGCGGCTCAATCAGTGCCTGAGTCAGGTCCAAAAGTGTACACGACTGTCCCAACAGCATCACTACCCATTAGTGCGCCTTCTCAGACTCAGCAACAATATACTGTCCTTCCTGAACCACAGCTTACTTCCCAACCTGTCTCAACTGCATCAGTTCCTGCTGCAAATGATGCAAATGAGTTTGACGATGATCTTGCATACAATCAGATATATAAATCTCAGCCTCCTCCACCTTCTTTCATTTCCCAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E427944" ref_strand="+" ref_description="SGN-E427944 [STM-49-I24]">
      <seq>ctcatcatcagcttcaatagagagcgatagtatcgttggaagtacgggttttcaacctaaagttggaattcaccaagagccacttattcaagttatgtccagtatggcttcccacagtctcttcgaagcagaaggctccaatgccaatccctctctcattcagacgccaaaaatggttcaggtttctgggtatccactacctcaaacattggatgggaagcacccccaacctggaatgcagtatgttcatggtggtgcctgttatgtacctcattatcctagcggtcctttgccagtatcatcctgttatccattttatcaggttcccatgcagcagccacaacaaactccttatcctctgaatcaacaatacccaatatacttggttcctatgcagcaaatgcaatctcacagtatgtcagtgttgcccaacattaatcatgcagcagtaatggcgtccaatcggccacccttgcatccacaaagtgtcataaaccctccatcagtagcttataaggaggtcatggcggctcaatcagtgcctgagtcgggttcaaaagtgtacacgactgtcccaacagcatcactacccattagtgcgccttctcagactcagcaacaatatactgtccttcctgaaccacagcttatttcccaacctgtctcaactgcatcagttcctgctgcaaatgatgcaaatgagtttgacgatgatcttgcatacnatcagatatataaatctcagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0180C05.2" temp_strand="-" temp_description="C02HBa0180C05.2  AC215411.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0180C05 sequenced_by:kribb upload_account_name:korea">
        <position start="36255" stop="33974"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="35955" g_stop="35932" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="24" r_length="24" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="35931" i_stop="34996" i_length="936">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.992" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="34995" g_stop="34274" g_length="722"/>
          <reference_exon_boundary r_type="cDNA" r_start="25" r_stop="746" r_length="722" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0180C05.2" gen_strand="-" ref_id="SGN-E427944" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>746</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0180C05.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E427944" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="35955" e_stop="35932"/>
          <exon e_start="34995" e_stop="34274"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCATCATCAGCTTCAATAGAGAGGTACTATTTTCTTTTTTTCTATTTGATGTTACTGTTTGTTTTCTAGTTATGCTATTGGAGTCATTGATGCTATGTAGGTTAACAAAAGTTTAGATTTTTGGTTGACCTACTGGTTTTATGGGTTGAGTTCTGCACCAATACCTGTGCTATGTAAGTAAGTACTTTTTCTTTTTTATGACAACGGAAATCCGCAGCCGCTAACTTTTGGGTGCGTACAGGGTAAACCTCGTTTCTATGTCATAGCTCGCAAACCACATAGGAGAGCTAATCCGCACTAGGCAAGCCTTGTGCGATGAGCTCGACCCAGAAGGCAAACCCCTTGTTTTCGCTGGCAAGGGGTTTCAAACTTGAGACCTCCAACATGGAAGTCCCAAGATCAAGTATTTTTGTTTCAATTGGATTCTACTTCCCTGTGACAATAGAAGAGAAAGGTAGTAAGGTGACGAGGAACATATTGATTTATATTTTTGACTTACAGGGTCTTTTTTTTTCACTTTGTTAAGAGTTACAAATTAGTGTAATGAATCCACAGTAGAATTTCATTGGGGATTAACTGACAGCCCTCCCCAAAAGGAAGAGAAATCATTAGTTTCTACAGTGTAGTATGCTTTGGCCTGTATTCTAGCTTGTTATGCTATTTGTATGGTTACTGTAGTGTTATGAACTGACAGTCTGTTTTCTGGATTGCTTTAGTTCAGTTTATTCACTTGTAAGCCGCTCTTTTCCTCTTTATTATTCACAGAAGAAGACTTCTAAGGTTTCTTGAGCTGATGAATCTATATGCTCAAGTTAGTGGTGGCGTTTTCATTGATTGCTCGTTGAGAATACACTTTAACACTAAAAATAAGATACATGCATTTATTTGGATCTGTTCCTTACATTAGGTTGCCTCTAAAATCTGTACTTATGGGCCTCTGTATTGGTTAATTTCCACAGCGATAGTATCATGGGAGGTGCGGGTTTTCAACCTAAAGTTGGAATTCACCAAGAACCACTTATTCAAGTTATGTCCAGTATGGCCTCCCACAGTCTCTTCGAAGCAGAAGGCTCCAATGCCAGTCCCTCTCTCATTCAGACGCCAAAAATGGTTCAGGTTTCTGGGTATCCACTACCTCAGACATTGGATGGGAAGCAGCCCCAACCTGGAATTCAGTATGTTCATGGCGGTGCCTGTTATGTACCTCATTATCCTAGCGGTCCTCTGCCAGTATCATCCTGTTATCCATTTTATCAGGTTCCCATGCAGCAGCCACAACAAACTCCTTATCCTCTGAATCAACAATACCCAATATACTTGGTTCCTGTGCAGCAAATGCAATCTCACAGTATGTCAGTACTGCCCAACATTAATCATGCAGCAGTGATGGCGTCCAATCGGCCACCCTTGCATTCACAAAGTGTCATAAACCCTCCATCAGTAGCTTATAAGGAGGTCATGGCGGCTCAATCAGTGCCTGAGTCAGGTCCAAAAGTGTACACGACTGTCCCAACAGCATCACTACCCATTAGTGCGCCTTCTCAGACTCAGCAACAATATACTGTCCTTCCTGAACCACAGCTTACTTCCCAACCTGTCTCAACTGCATCAGTTCCTGCTGCAAATGATGCAAATGAGTTTGACGATGATCTTGCATACAATCAGATATATAAATCTCAGC</genome_strand>
        <mrna_strand>CTCATCATCAGCTTCAATAGAGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATAGTATCGTTGGAAGTACGGGTTTTCAACCTAAAGTTGGAATTCACCAAGAGCCACTTATTCAAGTTATGTCCAGTATGGCTTCCCACAGTCTCTTCGAAGCAGAAGGCTCCAATGCCAATCCCTCTCTCATTCAGACGCCAAAAATGGTTCAGGTTTCTGGGTATCCACTACCTCAAACATTGGATGGGAAGCACCCCCAACCTGGAATGCAGTATGTTCATGGTGGTGCCTGTTATGTACCTCATTATCCTAGCGGTCCTTTGCCAGTATCATCCTGTTATCCATTTTATCAGGTTCCCATGCAGCAGCCACAACAAACTCCTTATCCTCTGAATCAACAATACCCAATATACTTGGTTCCTATGCAGCAAATGCAATCTCACAGTATGTCAGTGTTGCCCAACATTAATCATGCAGCAGTAATGGCGTCCAATCGGCCACCCTTGCATCCACAAAGTGTCATAAACCCTCCATCAGTAGCTTATAAGGAGGTCATGGCGGCTCAATCAGTGCCTGAGTCGGGTTCAAAAGTGTACACGACTGTCCCAACAGCATCACTACCCATTAGTGCGCCTTCTCAGACTCAGCAACAATATACTGTCCTTCCTGAACCACAGCTTATTTCCCAACCTGTCTCAACTGCATCAGTTCCTGCTGCAAATGATGCAAATGAGTTTGACGATGATCTTGCATACNATCAGATATATAAATCTCAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E203802" ref_strand="+" ref_description="SGN-E203802 [cLEC-17-F2]">
      <seq>caaggtgataatttgagtgcaatcggagggagtgctggagatgccaaacaaacattgcattgcccaggtggttcagtgccctagtctatggatttggagacgagctcttcatttgggtcgaccagttcttccatttctatgtctaatatgcctgctattggagttcaagccgaggatggtggcgtcaatttgcaggacaaaagagtgagagtgccctcatcatcagcttcaatagagagcgatagtatcatgggaggtgcgggttttcaacctaaagttggaattcaccaagaaccacttattcaagttatgtccagtatggcctcccacagtctcttcgaagcagaaggctccaatgccagtccctctctcattcagacgccaaaaatggttcaggtttgtgggtatccactacctcagacattggatgggaagcagccccaacctggaattcagtatgttcatggcggtgcctgttatgtacctcattatcct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0180C05.2" temp_strand="-" temp_description="C02HBa0180C05.2  AC215411.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0180C05 sequenced_by:kribb upload_account_name:korea">
        <position start="36470" stop="34440"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36170" g_stop="35932" g_length="239"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="239" r_length="239" r_score="0.962"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="35931" i_stop="34996" i_length="936">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="34995" g_stop="34740" g_length="256"/>
          <reference_exon_boundary r_type="cDNA" r_start="240" r_stop="495" r_length="256" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0180C05.2" gen_strand="-" ref_id="SGN-E203802" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>495</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0180C05.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E203802" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36170" e_stop="35932"/>
          <exon e_start="34995" e_stop="34740"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAGGTGATAATTTGAGTGCAATCGGAGGGAGTGCTGGAGATGCCAAGCAAACATTGGATTTTGGTGGTGGTTCAGTGCCCGAGTCTATGGTTTTGGAGACGAGCTCTTCATTTGGGTCGACCAGTTCTTCCATTTCTATGTCTAATATGCCTGCTATTGGAGTTCAAGCCGAGGATGGTGGCGTCAATTTGCAGGACAAAAGAGTGAGAGTGCCCTCATCATCAGCTTCAATAGAGAGGTACTATTTTCTTTTTTTCTATTTGATGTTACTGTTTGTTTTCTAGTTATGCTATTGGAGTCATTGATGCTATGTAGGTTAACAAAAGTTTAGATTTTTGGTTGACCTACTGGTTTTATGGGTTGAGTTCTGCACCAATACCTGTGCTATGTAAGTAAGTACTTTTTCTTTTTTATGACAACGGAAATCCGCAGCCGCTAACTTTTGGGTGCGTACAGGGTAAACCTCGTTTCTATGTCATAGCTCGCAAACCACATAGGAGAGCTAATCCGCACTAGGCAAGCCTTGTGCGATGAGCTCGACCCAGAAGGCAAACCCCTTGTTTTCGCTGGCAAGGGGTTTCAAACTTGAGACCTCCAACATGGAAGTCCCAAGATCAAGTATTTTTGTTTCAATTGGATTCTACTTCCCTGTGACAATAGAAGAGAAAGGTAGTAAGGTGACGAGGAACATATTGATTTATATTTTTGACTTACAGGGTCTTTTTTTTTCACTTTGTTAAGAGTTACAAATTAGTGTAATGAATCCACAGTAGAATTTCATTGGGGATTAACTGACAGCCCTCCCCAAAAGGAAGAGAAATCATTAGTTTCTACAGTGTAGTATGCTTTGGCCTGTATTCTAGCTTGTTATGCTATTTGTATGGTTACTGTAGTGTTATGAACTGACAGTCTGTTTTCTGGATTGCTTTAGTTCAGTTTATTCACTTGTAAGCCGCTCTTTTCCTCTTTATTATTCACAGAAGAAGACTTCTAAGGTTTCTTGAGCTGATGAATCTATATGCTCAAGTTAGTGGTGGCGTTTTCATTGATTGCTCGTTGAGAATACACTTTAACACTAAAAATAAGATACATGCATTTATTTGGATCTGTTCCTTACATTAGGTTGCCTCTAAAATCTGTACTTATGGGCCTCTGTATTGGTTAATTTCCACAGCGATAGTATCATGGGAGGTGCGGGTTTTCAACCTAAAGTTGGAATTCACCAAGAACCACTTATTCAAGTTATGTCCAGTATGGCCTCCCACAGTCTCTTCGAAGCAGAAGGCTCCAATGCCAGTCCCTCTCTCATTCAGACGCCAAAAATGGTTCAGGTTTCTGGGTATCCACTACCTCAGACATTGGATGGGAAGCAGCCCCAACCTGGAATTCAGTATGTTCATGGCGGTGCCTGTTATGTACCTCATTATCCT</genome_strand>
        <mrna_strand>CAAGGTGATAATTTGAGTGCAATCGGAGGGAGTGCTGGAGATGCCAAACAAACATTGCATTGCCCAGGTGGTTCAGTGCCCTAGTCTATGGATTTGGAGACGAGCTCTTCATTTGGGTCGACCAGTTCTTCCATTTCTATGTCTAATATGCCTGCTATTGGAGTTCAAGCCGAGGATGGTGGCGTCAATTTGCAGGACAAAAGAGTGAGAGTGCCCTCATCATCAGCTTCAATAGAGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATAGTATCATGGGAGGTGCGGGTTTTCAACCTAAAGTTGGAATTCACCAAGAACCACTTATTCAAGTTATGTCCAGTATGGCCTCCCACAGTCTCTTCGAAGCAGAAGGCTCCAATGCCAGTCCCTCTCTCATTCAGACGCCAAAAATGGTTCAGGTTTGTGGGTATCCACTACCTCAGACATTGGATGGGAAGCAGCCCCAACCTGGAATTCAGTATGTTCATGGCGGTGCCTGTTATGTACCTCATTATCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E478195" ref_strand="+" ref_description="SGN-E478195 [cSTD-3-H9]">
      <seq>ctcatcatcagcttcaatagagagcgatagtatcgttggaagtacgggttttcaacctaaagttggaattcaccaagagccacttattcaagttatgtccagtatggcttcccacagtctcttcgaagcagaaggctccaatgccaatccctctctcattcagacgccaaaaatggttcaggtttctgggtatccactacctcaaacatnntggatgggaagcacccccaacctggaatgcagta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0180C05.2" temp_strand="-" temp_description="C02HBa0180C05.2  AC215411.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0180C05 sequenced_by:kribb upload_account_name:korea">
        <position start="36255" stop="34511"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="35955" g_stop="35932" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="24" r_length="24" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="35931" i_stop="34996" i_length="936">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.992" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="34995" g_stop="34777" g_length="219"/>
          <reference_exon_boundary r_type="cDNA" r_start="25" r_stop="245" r_length="221" r_score="0.936"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0180C05.2" gen_strand="-" ref_id="SGN-E478195" ref_strand="+">
        <total_alignment_score>0.936</total_alignment_score>
        <cumulative_length_of_scored_exons>243</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0180C05.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E478195" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="35955" e_stop="35932"/>
          <exon e_start="34995" e_stop="34777"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCATCATCAGCTTCAATAGAGAGGTACTATTTTCTTTTTTTCTATTTGATGTTACTGTTTGTTTTCTAGTTATGCTATTGGAGTCATTGATGCTATGTAGGTTAACAAAAGTTTAGATTTTTGGTTGACCTACTGGTTTTATGGGTTGAGTTCTGCACCAATACCTGTGCTATGTAAGTAAGTACTTTTTCTTTTTTATGACAACGGAAATCCGCAGCCGCTAACTTTTGGGTGCGTACAGGGTAAACCTCGTTTCTATGTCATAGCTCGCAAACCACATAGGAGAGCTAATCCGCACTAGGCAAGCCTTGTGCGATGAGCTCGACCCAGAAGGCAAACCCCTTGTTTTCGCTGGCAAGGGGTTTCAAACTTGAGACCTCCAACATGGAAGTCCCAAGATCAAGTATTTTTGTTTCAATTGGATTCTACTTCCCTGTGACAATAGAAGAGAAAGGTAGTAAGGTGACGAGGAACATATTGATTTATATTTTTGACTTACAGGGTCTTTTTTTTTCACTTTGTTAAGAGTTACAAATTAGTGTAATGAATCCACAGTAGAATTTCATTGGGGATTAACTGACAGCCCTCCCCAAAAGGAAGAGAAATCATTAGTTTCTACAGTGTAGTATGCTTTGGCCTGTATTCTAGCTTGTTATGCTATTTGTATGGTTACTGTAGTGTTATGAACTGACAGTCTGTTTTCTGGATTGCTTTAGTTCAGTTTATTCACTTGTAAGCCGCTCTTTTCCTCTTTATTATTCACAGAAGAAGACTTCTAAGGTTTCTTGAGCTGATGAATCTATATGCTCAAGTTAGTGGTGGCGTTTTCATTGATTGCTCGTTGAGAATACACTTTAACACTAAAAATAAGATACATGCATTTATTTGGATCTGTTCCTTACATTAGGTTGCCTCTAAAATCTGTACTTATGGGCCTCTGTATTGGTTAATTTCCACAGCGATAGTATCATGGGAGGTGCGGGTTTTCAACCTAAAGTTGGAATTCACCAAGAACCACTTATTCAAGTTATGTCCAGTATGGCCTCCCACAGTCTCTTCGAAGCAGAAGGCTCCAATGCCAGTCCCTCTCTCATTCAGACGCCAAAAATGGTTCAGGTTTCTGGGTATCCACTACCTCAGACAT--TGGATGGGAAGCAGCCCCAACCTGGAATTCAGTA</genome_strand>
        <mrna_strand>CTCATCATCAGCTTCAATAGAGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATAGTATCGTTGGAAGTACGGGTTTTCAACCTAAAGTTGGAATTCACCAAGAGCCACTTATTCAAGTTATGTCCAGTATGGCTTCCCACAGTCTCTTCGAAGCAGAAGGCTCCAATGCCAATCCCTCTCTCATTCAGACGCCAAAAATGGTTCAGGTTTCTGGGTATCCACTACCTCAAACATNNTGGATGGGAAGCACCCCCAACCTGGAATGCAGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E710024" ref_strand="+" ref_description="SGN-E710024 [FA53DH11]">
      <seq>tgggatttgagatctgttttcgttttcaagaatttcagatgcttttcgcagtctcagaacggattaagtcaaaggttggaaacttctgctggattttctcaactgttccggccgttgatagcccacaagaaacaccagggtagaatgagggatgcccagcctggatcacatactgtgagcgtgaggtctcatggtgtgacggttgcatcatatacagtgaggtcccatggtataacagtggcaaggactcatttaaatgactggatgatcctaatactacttttggggatagttgtccttctgaatgttatccatccgttttaccggtttgttgggaaagacatgatggaagacctcaagtatcctttaaaaagtaatactgtacctttttgggctgtgccagtgtatgctgttctgctgcctatggttgtatttctgctcatttattttcggcgaagagatgtctatgatcttcatcatgccatactgggccttttgttctctgttgtggtaacagctgttatcacaggtgctataaaagatgcagttggaaggcctaggccagacttcttctggcgctgttttccagatggaaaggaagtttacgataaatggggagatgttgtatgccatggtgacaaaaatgttgtcagggaagggcataaaagttttccaagtggtcatacctccttgtcctttgctggtcttggctttctatcgctttatttatctggcaagatacaagtctttgactgtagaggacatgttgctaaactgtgtctcgtattacttccacttcttcttgcatctctggttgccatttctcgggtggatgactattggcatcattggcaggatgtgtttgctggaggtctgattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0180C05.2" temp_strand="+" temp_description="C02HBa0180C05.2  AC215411.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0180C05 sequenced_by:kribb upload_account_name:korea">
        <position start="42099" stop="44971"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="42399" g_stop="42455" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="57" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="42456" i_stop="42723" i_length="268">
            <donor d_prob="0.912" d_score="1.00"/>
            <acceptor a_prob="0.745" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42724" g_stop="42804" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="58" r_stop="138" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42805" i_stop="43490" i_length="686">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="43491" g_stop="43754" g_length="264"/>
          <reference_exon_boundary r_type="cDNA" r_start="139" r_stop="402" r_length="264" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="43755" i_stop="43844" i_length="90">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.167" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="43845" g_stop="43932" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="403" r_stop="490" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="43933" i_stop="44035" i_length="103">
            <donor d_prob="0.941" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="44036" g_stop="44145" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="491" r_stop="600" r_length="110" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="44146" i_stop="44254" i_length="109">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="44255" g_stop="44345" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="601" r_stop="691" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="44346" i_stop="44482" i_length="137">
            <donor d_prob="0.301" d_score="1.00"/>
            <acceptor a_prob="0.223" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="44483" g_stop="44671" g_length="189"/>
          <reference_exon_boundary r_type="cDNA" r_start="692" r_stop="880" r_length="189" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0180C05.2" gen_strand="+" ref_id="SGN-E710024" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>880</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0180C05.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E710024" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="42399" e_stop="42455"/>
          <exon e_start="42724" e_stop="42804"/>
          <exon e_start="43491" e_stop="43754"/>
          <exon e_start="43845" e_stop="43932"/>
          <exon e_start="44036" e_stop="44145"/>
          <exon e_start="44255" e_stop="44345"/>
          <exon e_start="44483" e_stop="44671"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGGATTTGAGATCTGTTTTCGTTTTCAAGAATTTCAGATGCTTTTCGCAGTCTCAGGTGCGTAAGGATTATCTGCTATGTTTTGATAACGGCGACTGTAATTTATGCCCATGTTTGATCTAACGCTTTATCTATTCCCAAGATTGGTGACTTTACTCAAATGTTATGGCTAATTCTCCTGTACTGGAAAGTGTCAAGTTCTTAGATTTAGTTGCACTGTAGTAGTTGCAAAATGCTAAAAGGAATACTTATGATGTTAATGATATTTAGCTTTTTGCTATTGAGGCAATGATAAGTTTGATTTTTTTTTTCGGCTTTCAATCAGAACGGATTAAGTCAAAGGTTGGAAACTTCTGCTGGATTTTCTCAACTGTTCCGGCCGTTGATAGCCCACAAGAAACACCAGGTATATATTTCTCACATTTGATGTAGTTAAAGGAATTGGGATGAAAGTGAGTAGCTAGAATGGGTTTTTATTCCATCCATAGCATATTATATACAAGACTTGAGATGAAAGAAGGGGATGGATAAGTTTGGAAATGATTTTGGGTGAGATAATTGCGAACTCAATAGATTGGAACGTCCTGTGAACTATCTTGAGTCACGCACATCTAGTGTGAACAAATAAAATGAACTTTGGCTAATTTCAAACTGCCATTTGCACCTAGACAAAACTATTTTTAGATGGATCATGAGCCATGTATTCAATTTATGGGAATATGCTTGAGTTCTTTTGTAGGCATGTCATGCTTGCTTTACCATTCTGACCAACGTCTACCCCTGAATACTGATACAGTCTACCTTAGGATGTTGTTTTGTTTATTTCTATAAACAAAATTATAGTCTCGACTATATAAAGCACACTTCTGTAGATGTGGCAATCTGTTTTTTTACCTTGTAGGATGAAATAAAAATCCACCTGCACATATAACAGATGTCTAATGCAAATGACCTTGTTATAGCTCTGAAAAATTTAGAGAAGGAGATTATCTTGTGTTTATATATGCAGCTTATTACAAATTTAGAACAAATAAGTCTTTGCAATCATATTAAAAGAATACTCAATTTCTTACTTCTACATGTTCTTAGCAGGGTAGAATGAGGGATGCCCAGCCTGGATCACATACTGTGAGCGTGAGGTCTCATGGTGTGACGGTTGCATCATATACAGTGAGGTCCCATGGTATAACAGTGGCAAGGACTCATTTAAATGACTGGATGATCCTAATACTACTTTTGGGGATAGTTGTCCTTCTGAATGTTATCCATCCGTTTTACCGGTTTGTTGGGAAAGACATGATGGAAGACCTCAAGTATCCTTTAAAAAGTAATACTGTACCTTTTTGGGCTGTGCCAGTGAGTTGATCCTCATTTTTCATTCAGTAGCTACAAAATTACTTTATAGAGGCGATTAGTACCTCATATTCAGATTTCTAAATTTATCAGGTGTATGCTGTTCTGCTGCCTATGGTTGTATTTCTGCTCATTTATTTTCGGCGAAGAGATGTCTATGATCTTCATCATGCCATACTGGGTAAACTATTCTTTGGATTTGGCTAGTTTTAGTGGAAGTTGTTTATAATGTCCTCACCATAAAAGCTTTCTGGTTGTCGTCCTCTAATATGTTGTATTGGCAGGCCTTTTGTTCTCTGTTGTGGTAACAGCTGTTATCACAGGTGCTATAAAAGATGCAGTTGGAAGGCCTAGGCCAGACTTCTTCTGGCGCTGTTTTCCAGATGGAAAGGAAGTATGTTTGCCATGATGGTTATACTTTATGTTTCTAGTTGTAGTCTAAGGCTTCTCAGTTTTGGGGAGTAGTATTTTAACAGCGCCTTTAAATATTGATTGATCAACAGGTTTACGATAAATGGGGAGATGTTGTATGCCATGGTGACAAAAATGTTGTCAGGGAAGGGCATAAAAGTTTTCCAAGTGGTCATACCTCCTGTAAGTAGAATGCATGTTCATTAACGTTGCCTTGTAGAGCAAAAGAACGCGTGGAGACAGACTTGAAATTTACAGCATACGTATTTTGATTCTTTCTCGTCTTCTCAACCTTTTGAGGATTTCGGATCAACTTGCAGTGTCCTTTGCTGGTCTTGGCTTTCTATCGCTTTATTTATCTGGCAAGATACAAGTCTTTGACTGTAGAGGACATGTTGCTAAACTGTGTCTCGTATTACTTCCACTTCTTCTTGCATCTCTGGTTGCCATTTCTCGGGTGGATGACTATTGGCATCATTGGCAGGATGTGTTTGCTGGAGGTCTGATTG</genome_strand>
        <mrna_strand>TGGGATTTGAGATCTGTTTTCGTTTTCAAGAATTTCAGATGCTTTTCGCAGTCTCAG............................................................................................................................................................................................................................................................................AACGGATTAAGTCAAAGGTTGGAAACTTCTGCTGGATTTTCTCAACTGTTCCGGCCGTTGATAGCCCACAAGAAACACCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTAGAATGAGGGATGCCCAGCCTGGATCACATACTGTGAGCGTGAGGTCTCATGGTGTGACGGTTGCATCATATACAGTGAGGTCCCATGGTATAACAGTGGCAAGGACTCATTTAAATGACTGGATGATCCTAATACTACTTTTGGGGATAGTTGTCCTTCTGAATGTTATCCATCCGTTTTACCGGTTTGTTGGGAAAGACATGATGGAAGACCTCAAGTATCCTTTAAAAAGTAATACTGTACCTTTTTGGGCTGTGCCA..........................................................................................GTGTATGCTGTTCTGCTGCCTATGGTTGTATTTCTGCTCATTTATTTTCGGCGAAGAGATGTCTATGATCTTCATCATGCCATACTGG.......................................................................................................GCCTTTTGTTCTCTGTTGTGGTAACAGCTGTTATCACAGGTGCTATAAAAGATGCAGTTGGAAGGCCTAGGCCAGACTTCTTCTGGCGCTGTTTTCCAGATGGAAAGGAA.............................................................................................................GTTTACGATAAATGGGGAGATGTTGTATGCCATGGTGACAAAAATGTTGTCAGGGAAGGGCATAAAAGTTTTCCAAGTGGTCATACCTCCT.........................................................................................................................................TGTCCTTTGCTGGTCTTGGCTTTCTATCGCTTTATTTATCTGGCAAGATACAAGTCTTTGACTGTAGAGGACATGTTGCTAAACTGTGTCTCGTATTACTTCCACTTCTTCTTGCATCTCTGGTTGCCATTTCTCGGGTGGATGACTATTGGCATCATTGGCAGGATGTGTTTGCTGGAGGTCTGATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E718708" ref_strand="+" ref_description="SGN-E718708 [FC05CB03]">
      <seq>gggatttgagatctgttttcgttttcaagaatttcagatgcttttcgcactctcccaacggattaagtcaaaggttggaaacttctgatggattttctcaactgttccggccgttgatagcccacaataaacaccagcagggtaaaatgagggatgcccagcctggatcacatactgtgagcgtgaggtctcatggtgtgacggttgcatcatatacagtgaggtcccatggtataacagtggcaaggactcatttaaatgactggatgatcctaatactacttttggggatagttgtccttctgaatgttatccatccgttttaccggtttgttgggaaagacatgatggaagacctcaagtatcctttaaaaagtaatactgtacctttttgggctgtgccagtgtatgctgttctgctgcctatggttgtatttctgctcatttattttcggcgaacagatgtctatgatcttcatcatgccatactgggcctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0180C05.2" temp_strand="+" temp_description="C02HBa0180C05.2  AC215411.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0180C05 sequenced_by:kribb upload_account_name:korea">
        <position start="42100" stop="44233"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="42400" g_stop="42455" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="56" r_length="56" r_score="0.946"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="42456" i_stop="42723" i_length="268">
            <donor d_prob="0.912" d_score="0.94"/>
            <acceptor a_prob="0.745" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42724" g_stop="42804" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="57" r_stop="137" r_length="81" r_score="0.975"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42805" i_stop="43487" i_length="683">
            <donor d_prob="0.996" d_score="0.96"/>
            <acceptor a_prob="0.990" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="43488" g_stop="43754" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="138" r_stop="404" r_length="267" r_score="0.996"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="43755" i_stop="43844" i_length="90">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.167" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="43845" g_stop="43932" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="405" r_stop="492" r_length="88" r_score="0.989"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="43933" i_stop="44035" i_length="103">
            <donor d_prob="0.941" d_score="0.98"/>
            <acceptor a_prob="0.969" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="44036" g_stop="44040" g_length="5"/>
          <reference_exon_boundary r_type="cDNA" r_start="493" r_stop="497" r_length="5" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0180C05.2" gen_strand="+" ref_id="SGN-E718708" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>497</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0180C05.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E718708" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="42400" e_stop="42455"/>
          <exon e_start="42724" e_stop="42804"/>
          <exon e_start="43488" e_stop="43754"/>
          <exon e_start="43845" e_stop="43932"/>
          <exon e_start="44036" e_stop="44040"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGATTTGAGATCTGTTTTCGTTTTCAAGAATTTCAGATGCTTTTCGCAGTCTCAGGTGCGTAAGGATTATCTGCTATGTTTTGATAACGGCGACTGTAATTTATGCCCATGTTTGATCTAACGCTTTATCTATTCCCAAGATTGGTGACTTTACTCAAATGTTATGGCTAATTCTCCTGTACTGGAAAGTGTCAAGTTCTTAGATTTAGTTGCACTGTAGTAGTTGCAAAATGCTAAAAGGAATACTTATGATGTTAATGATATTTAGCTTTTTGCTATTGAGGCAATGATAAGTTTGATTTTTTTTTTCGGCTTTCAATCAGAACGGATTAAGTCAAAGGTTGGAAACTTCTGCTGGATTTTCTCAACTGTTCCGGCCGTTGATAGCCCACAAGAAACACCAGGTATATATTTCTCACATTTGATGTAGTTAAAGGAATTGGGATGAAAGTGAGTAGCTAGAATGGGTTTTTATTCCATCCATAGCATATTATATACAAGACTTGAGATGAAAGAAGGGGATGGATAAGTTTGGAAATGATTTTGGGTGAGATAATTGCGAACTCAATAGATTGGAACGTCCTGTGAACTATCTTGAGTCACGCACATCTAGTGTGAACAAATAAAATGAACTTTGGCTAATTTCAAACTGCCATTTGCACCTAGACAAAACTATTTTTAGATGGATCATGAGCCATGTATTCAATTTATGGGAATATGCTTGAGTTCTTTTGTAGGCATGTCATGCTTGCTTTACCATTCTGACCAACGTCTACCCCTGAATACTGATACAGTCTACCTTAGGATGTTGTTTTGTTTATTTCTATAAACAAAATTATAGTCTCGACTATATAAAGCACACTTCTGTAGATGTGGCAATCTGTTTTTTTACCTTGTAGGATGAAATAAAAATCCACCTGCACATATAACAGATGTCTAATGCAAATGACCTTGTTATAGCTCTGAAAAATTTAGAGAAGGAGATTATCTTGTGTTTATATATGCAGCTTATTACAAATTTAGAACAAATAAGTCTTTGCAATCATATTAAAAGAATACTCAATTTCTTACTTCTACATGTTCTTAGCAGGGTAGAATGAGGGATGCCCAGCCTGGATCACATACTGTGAGCGTGAGGTCTCATGGTGTGACGGTTGCATCATATACAGTGAGGTCCCATGGTATAACAGTGGCAAGGACTCATTTAAATGACTGGATGATCCTAATACTACTTTTGGGGATAGTTGTCCTTCTGAATGTTATCCATCCGTTTTACCGGTTTGTTGGGAAAGACATGATGGAAGACCTCAAGTATCCTTTAAAAAGTAATACTGTACCTTTTTGGGCTGTGCCAGTGAGTTGATCCTCATTTTTCATTCAGTAGCTACAAAATTACTTTATAGAGGCGATTAGTACCTCATATTCAGATTTCTAAATTTATCAGGTGTATGCTGTTCTGCTGCCTATGGTTGTATTTCTGCTCATTTATTTTCGGCGAAGAGATGTCTATGATCTTCATCATGCCATACTGGGTAAACTATTCTTTGGATTTGGCTAGTTTTAGTGGAAGTTGTTTATAATGTCCTCACCATAAAAGCTTTCTGGTTGTCGTCCTCTAATATGTTGTATTGGCAGGCCTT</genome_strand>
        <mrna_strand>GGGATTTGAGATCTGTTTTCGTTTTCAAGAATTTCAGATGCTTTTCGCACTCTCCC............................................................................................................................................................................................................................................................................AACGGATTAAGTCAAAGGTTGGAAACTTCTGATGGATTTTCTCAACTGTTCCGGCCGTTGATAGCCCACAATAAACACCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGGTAAAATGAGGGATGCCCAGCCTGGATCACATACTGTGAGCGTGAGGTCTCATGGTGTGACGGTTGCATCATATACAGTGAGGTCCCATGGTATAACAGTGGCAAGGACTCATTTAAATGACTGGATGATCCTAATACTACTTTTGGGGATAGTTGTCCTTCTGAATGTTATCCATCCGTTTTACCGGTTTGTTGGGAAAGACATGATGGAAGACCTCAAGTATCCTTTAAAAAGTAATACTGTACCTTTTTGGGCTGTGCCA..........................................................................................GTGTATGCTGTTCTGCTGCCTATGGTTGTATTTCTGCTCATTTATTTTCGGCGAACAGATGTCTATGATCTTCATCATGCCATACTGG.......................................................................................................GCCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E367186" ref_strand="+" ref_description="SGN-E367186 [cLPT-5-A5]">
      <seq>catgtatctgcgtctttcctccattaactgttttgtgacaatgtcagattttctttgaattcttgcctgcattccttttgaagaaaaatcaagaacttatccatctttttgaagttacacctgtattctaaggcatatttacaagaaataatgaaatttttattttcaagaatatattgacattgcaaatataaagatattcaagaaaactttctttctccaaaaaattctgttgtttttcgtactgtgtgttgaagatgttctagaatttgtttttgaagctttttatcttgtatgatttcagaagggttggtcgttgtagtcataggattgcatgcattactcaactaataagccgttctggcggtttgtgttcattggtttgcgtata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0180C05.2" temp_strand="-" temp_description="C02HBa0180C05.2  AC215411.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0180C05 sequenced_by:kribb upload_account_name:korea">
        <position start="55269" stop="54097"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54969" g_stop="54659" g_length="311"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="311" r_length="311" r_score="0.974"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="54658" i_stop="54477" i_length="182">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="54476" g_stop="54397" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="312" r_stop="391" r_length="80" r_score="0.938"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0180C05.2" gen_strand="-" ref_id="SGN-E367186" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>391</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0180C05.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E367186" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54969" e_stop="54659"/>
          <exon e_start="54476" e_stop="54397"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATGTATCTGCGTCTTTCCTCCATTAACTGTTTTGTGACAATGTCAGATTTTCTTTGAATTCTTGCCTGCATTCCTTTT-AAGAAAAATCAAGAACTTATCCATCTTTTTGAAGTTACACCTGTATTCTTAAGGCATATTTACAGGAAATAATGAAATTGTTATTTTCAAGAATATATTGACATTGCAAATATAAAGAAATTCAAGAAAACTTTCTTTCTCCAAAAAATTCTGTTGTTTTTCGTACTGTGTGTTGAAGATGTTCTAGAATTTGTTTTTGAGCCTTTTTATCTTGTATGATTTCAGAAGGGTTGTTGAGGAGTTGGTTTTAACAGCCGTAGGAATTGAATGTTGTGGAGTTGTTCTTGAAGTCCCACTCACACAACTTTTAAAGATAGTGTACTGATGTTCTTGATGCTGACATCATCTTTTCTATTGTATTGATGCCTGTACATAATTTCTTTGCCCAACAACTATGTGTACATAACTTGGAATGGTCGTTGTAGCCATAGGATTGCATGCATTACTCAACTAATAGGCCGCTCTGGCGGTTTGTATTCATTGGTTTGCATATA</genome_strand>
        <mrna_strand>CATGTATCTGCGTCTTTCCTCCATTAACTGTTTTGTGACAATGTCAGATTTTCTTTGAATTCTTGCCTGCATTCCTTTTGAAGAAAAATCAAGAACTTATCCATCTTTTTGAAGTTACACCTGTATTC-TAAGGCATATTTACAAGAAATAATGAAATTTTTATTTTCAAGAATATATTGACATTGCAAATATAAAGATATTCAAGAAAACTTTCTTTCTCCAAAAAATTCTGTTGTTTTTCGTACTGTGTGTTGAAGATGTTCTAGAATTTGTTTTTGAAGCTTTTTATCTTGTATGATTTCAGAAGGGTT......................................................................................................................................................................................GGTCGTTGTAGTCATAGGATTGCATGCATTACTCAACTAATAAGCCGTTCTGGCGGTTTGTGTTCATTGGTTTGCGTATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E249644" ref_strand="+" ref_description="SGN-E249644 [cLEF-56-D1]">
      <seq>tcgtgccgccccttttggctgtcttaaagaactctctatttactcagcgtggaaattcaggggaatttgattatggggagttttatggttcttgtgagttgaatttggagagtcttttgttgactggaattaaatcaggggataagggggttggttttttatggaggaattgcaaaaaggtaacaactttgaagctgataagctgtgaaggggttggtgatcaaggttcttttttaacatttcttcagtgtttagagggtcttcaagaattgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0180C05.2" temp_strand="+" temp_description="C02HBa0180C05.2  AC215411.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0180C05 sequenced_by:kribb upload_account_name:korea">
        <position start="116901" stop="117764"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="117192" g_stop="117464" g_length="273"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="273" r_length="273" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0180C05.2" gen_strand="+" ref_id="SGN-E249644" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>273</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0180C05.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E249644" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="117192" e_stop="117464"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTGGGTAACCCCTTTTGGCTGTCTTAAAGAACTCTCTATTTACTCAGC-TGGAAATTCAGGGGAATTTGATTATGGGGAGTTTTATGGTTCTTGTGAGTTGAATTTGGAGAGTCTTTTGTTGACTGGAATTAAATCAGGGGATAAGGGGGTTGGTTTTTTATGGAGGAATTGCAAAAAGGTAACAACTTTGAAGCTGATAAGCTGTGAAGGGGTTGGTGATCAAGGTTCTTTTTTAACATTTCTTCAGTGTTTAGAGGGTCTTCAAGAATTGG</genome_strand>
        <mrna_strand>TC-GTGCCGCCCCTTTTGGCTGTCTTAAAGAACTCTCTATTTACTCAGCGTGGAAATTCAGGGGAATTTGATTATGGGGAGTTTTATGGTTCTTGTGAGTTGAATTTGGAGAGTCTTTTGTTGACTGGAATTAAATCAGGGGATAAGGGGGTTGGTTTTTTATGGAGGAATTGCAAAAAGGTAACAACTTTGAAGCTGATAAGCTGTGAAGGGGTTGGTGATCAAGGTTCTTTTTTAACATTTCTTCAGTGTTTAGAGGGTCTTCAAGAATTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E262669" ref_strand="+" ref_description="SGN-E262669 [cLEG-63-E7]">
      <seq>aggcgccatacctgtggagacagacaattgaaatcatgggtgatcctgtccatgagagtgttcccttatcaccagaccaccgtaatgatgtgattgaaccagatagaaatctggaggaacagatcattgaagacaaggaaagtgcgagatggaagcctctcgaggacacattccttcctctttgatcatacgggatagtaactagagatgcatgtagacaagataccagtgaattgcaatgccaggaaaagaaggatcatgtctctttggtcacacggaaacaaaacaagagacatagaaaatgtggattatgtgatgatctcagcaacgtctacaaggaagacttcatttcagcaaaagtcaagatggcatcttgggtaaagtctcccaactatatttgaaaatgaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0180C05.2" temp_strand="+" temp_description="C02HBa0180C05.2  AC215411.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0180C05 sequenced_by:kribb upload_account_name:korea">
        <position start="119860" stop="121261"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="120160" g_stop="120183" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="24" r_length="24" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="120184" i_stop="120338" i_length="155">
            <donor d_prob="0.998" d_score="0.00"/>
            <acceptor a_prob="0.803" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="120339" g_stop="120620" g_length="282"/>
          <reference_exon_boundary r_type="cDNA" r_start="25" r_stop="306" r_length="282" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="120621" i_stop="120858" i_length="238">
            <donor d_prob="0.965" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="120859" g_stop="120961" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="307" r_stop="409" r_length="103" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0180C05.2" gen_strand="+" ref_id="SGN-E262669" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>409</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0180C05.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E262669" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="120160" e_stop="120183"/>
          <exon e_start="120339" e_stop="120620"/>
          <exon e_start="120859" e_stop="120961"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGCGCCATACCTGTGGAGACAGAGTAAGAATCTAATTGACTTTAGATGTAGATTTTTTTTCTGATTATTTCCAAGATTTGAATGTGTCTTTTTTACTCAATGTAAAACTTCTTCCCCTAAGAATCACGCAGCACTAAATCAAGGAACTGTTTGTGATGACATTCCTCTGATATTCCAGCAATTGAAATCATGGGTGATCCTGTCCATGAGAGTGTTCCCTTATCACCAGACCACCGTAATGATGTGATTGAACCAGATAGAAATCTGGAGGAACAGATCATTGAAGACAAGGAAAGTGCGAGATGGAAGCCTCTCGAGGACACATTCCTTCCTCTTTGATCATACGGGATAGTAACTAGAGATGCATGTAGACAAGATACCAGTGAATTGCAATGCCAGGAAAAGAAGGATCATGTCTCTTTGGTCACACGGAAACAAAACAAGAGACATAGAAAATGTGGTATGTTATTCGAGCCTTTACTATAACTGTTGGGTGTATCTAACAAAACTTTTTTTTTTTTTGAATGTAATACAGTCAAACCTCTCTATGACGGCGTAGTTTGTTCCAGTATGTTTTGGCTACTATAGCAAAATGTGGTTATTCGAGAACACATAATATAACATATCATGAAAGATCGGTTATATTGCTATAGAGAGGTTTGACACTACTAGCTAACTCAGCTGTTGTAAATTTGTAGGATTATGTGATGATCTCAGCAACGTCTACAAGGAAGACTTCATTTCAGCAAAAGTCAAGATGGCATCTTGGGTAAAGTCTCCCAACTATATTTGAAAATGAAT</genome_strand>
        <mrna_strand>AGGCGCCATACCTGTGGAGACAGA...........................................................................................................................................................CAATTGAAATCATGGGTGATCCTGTCCATGAGAGTGTTCCCTTATCACCAGACCACCGTAATGATGTGATTGAACCAGATAGAAATCTGGAGGAACAGATCATTGAAGACAAGGAAAGTGCGAGATGGAAGCCTCTCGAGGACACATTCCTTCCTCTTTGATCATACGGGATAGTAACTAGAGATGCATGTAGACAAGATACCAGTGAATTGCAATGCCAGGAAAAGAAGGATCATGTCTCTTTGGTCACACGGAAACAAAACAAGAGACATAGAAAATGTG..............................................................................................................................................................................................................................................GATTATGTGATGATCTCAGCAACGTCTACAAGGAAGACTTCATTTCAGCAAAAGTCAAGATGGCATCTTGGGTAAAGTCTCCCAACTATATTTGAAAATGAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E369869" ref_strand="+" ref_description="SGN-E369869 [TUS-26-F15](-)">
      <seq>caaggttgcccacaataaaaaatatattcgtaaaattggtttagtttgcaggatattcccttaacagtatgatggttgcagaaccgtggctgaatgtttttctagactggtaagtaatctgctattttttttcttgaggatgcaagtcaattctcaaatattggtgttgtagaggctatgatgctcgcactctccgagtgtcagatcctccaaaaatacattttttgacatgcaactagccgcgtattttatgaatccaagacaatgtagtctggaagtcttaataataaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0180C05.2" temp_strand="+" temp_description="C02HBa0180C05.2  AC215411.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0180C05 sequenced_by:kribb upload_account_name:korea">
        <position start="121011" stop="121891"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="121311" g_stop="121591" g_length="281"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="282" r_length="282" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="289" polyA_stop="300"/>
      <MATCH_line gen_id="C02HBa0180C05.2" gen_strand="+" ref_id="SGN-E369869" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>281</cumulative_length_of_scored_exons>
        <coverage percentage="0.937" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0180C05.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E369869" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="121311" e_stop="121591"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAGGTTGCCCCCAATAAAAAATATATTCGTAAAATTGGTTTAGTTTGCAGGATATTCCCTTAACAGTATGATGGTTGCAGAACCGTGGCTGAATGTTTTTCTAGACTGGTAAGTAATCTGCTATTTTTTTTCTTGAGGATGCAAGTCAATTCTCAAATATTGGTGTTGTAGAGGCTATGATGCTCGCACTCTCCGAGTGTCAGATCCTCCAAAAATACATTTTTTGACATGCAACTAGCCGCGTATTTTATGAATCCAAG-CAATGTAGTCTGGAAGTCTT</genome_strand>
        <mrna_strand>CAAGGTTGCCCACAATAAAAAATATATTCGTAAAATTGGTTTAGTTTGCAGGATATTCCCTTAACAGTATGATGGTTGCAGAACCGTGGCTGAATGTTTTTCTAGACTGGTAAGTAATCTGCTATTTTTTTTCTTGAGGATGCAAGTCAATTCTCAAATATTGGTGTTGTAGAGGCTATGATGCTCGCACTCTCCGAGTGTCAGATCCTCCAAAAATACATTTTTTGACATGCAACTAGCCGCGTATTTTATGAATCCAAGACAATGTAGTCTGGAAGTCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E419137" ref_strand="+" ref_description="SGN-E419137 [STM-29-E9]">
      <seq>gaaaaaccagcagtaatggaggaggagaaacctttaacagaagggcttctggagaagaatttgccaattgtagactcaaaggacaagatagacgatgcaattccatgcaataccaccaataatgatattgctaactatgcatcagttgaggaaaaacctaacgaaccagtagttggaaaaacacatgaagaattagcaattgaagataaatctgaagaatcagttgtttcggagaagcttgaagaactagtggttgagaaaaaaactgaacaaccgacagttgaagagaaacctgaaaaaccagcagttggagagaaacatgaagaaccagccgttgaagaggagaaacctgaaaaaactatgctaattgtagacttgaacgacaaaactggtagtgaaattccatgcaataccggtaatgatgttgctcactttccagacattgaggaaaatcctgaagtgtcggcagttgaagaaaaaactgaagaatcagtcattgaacagaaacctgatgtaccagcagttaaggagaaacctgaagaaccaacatttgaggagaaatctgaagtactggt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0180C05.2" temp_strand="+" temp_description="C02HBa0180C05.2  AC215411.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0180C05 sequenced_by:kribb upload_account_name:korea">
        <position start="139527" stop="140921"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="139827" g_stop="139883" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="57" r_length="57" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="139884" i_stop="139998" i_length="115">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="139999" g_stop="140289" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="58" r_stop="357" r_length="300" r_score="0.914"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="140290" i_stop="140403" i_length="114">
            <donor d_prob="0.996" d_score="0.98"/>
            <acceptor a_prob="0.927" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="140404" g_stop="140621" g_length="218"/>
          <reference_exon_boundary r_type="cDNA" r_start="358" r_stop="575" r_length="218" r_score="0.931"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0180C05.2" gen_strand="+" ref_id="SGN-E419137" ref_strand="+">
        <total_alignment_score>0.928</total_alignment_score>
        <cumulative_length_of_scored_exons>566</cumulative_length_of_scored_exons>
        <coverage percentage="0.984" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0180C05.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E419137" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="139827" e_stop="139883"/>
          <exon e_start="139999" e_stop="140289"/>
          <exon e_start="140404" e_stop="140621"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAAACCAGCAGTAATGGAGGAGGAGAAACTTTTAACAGAAGGGCTTCTGGAGAAGGTGAAGATTAAACACTACCACAAAGTCTATCCATCATATTAGCTTTATATGTGCAATAAATTTACATCTGTTCATCTGTCAAAAGACTAAGTGAAACTTCATTTTTTTTTTGCAGAATTTGCCAATTGTAGACTCAAAGGACAAGATAGACGATGCAAATCCATGCAATACCACCAACAATGATATTGCTAACTATGCATCAGTTGAGGAAAAACCTGACGAACCAGTAATTGGAAAAACACATGAAGAATTAGCAATTGAAGATAAATCTGAAGAATCAGTTGTTTCGGAGAAGCTTGAAGAACTAATGGTT--G-------CTGAACAACCGACAGTTGAAGAGAAACCTCAAAAACCAGCAGTTGGGGAGAAACATGAAGAACCAGCCGTTGAAGAGGAGAAACCTGAAAAAGTATGGGTCATGCACTATCACAAAGTTTATCCATTTTGTTAGTTATGTATGTACTGTGATTCACATCTGCTTCTATATTGGAAGGCAAAGTAAAACATTAAATTCATTTTGCAGAATATGCTAATTGTAGACTTGAACAACAAAACTGGTAGTGAAATTCCATGCAATGCCGGTAATGATGTTGCACACTTTTCAGACACCGAGGAAAATCCTGAAGAATCGGCATTTCAAGAAAAAACTGAAGAATCAGTCATTGAACAGCAACCTGATGTACCAGCAGTTAAGGAGAAACCTGAAGAACCAACACTTGAGGAGAAAACTGAAGTACTAGT</genome_strand>
        <mrna_strand>GAAAAACCAGCAGTAATGGAGGAGGAGAAACCTTTAACAGAAGGGCTTCTGGAGAAG...................................................................................................................AATTTGCCAATTGTAGACTCAAAGGACAAGATAGACGATGCAATTCCATGCAATACCACCAATAATGATATTGCTAACTATGCATCAGTTGAGGAAAAACCTAACGAACCAGTAGTTGGAAAAACACATGAAGAATTAGCAATTGAAGATAAATCTGAAGAATCAGTTGTTTCGGAGAAGCTTGAAGAACTAGTGGTTGAGAAAAAAACTGAACAACCGACAGTTGAAGAGAAACCTGAAAAACCAGCAGTTGGAGAGAAACATGAAGAACCAGCCGTTGAAGAGGAGAAACCTGAAAAA..................................................................................................................ACTATGCTAATTGTAGACTTGAACGACAAAACTGGTAGTGAAATTCCATGCAATACCGGTAATGATGTTGCTCACTTTCCAGACATTGAGGAAAATCCTGAAGTGTCGGCAGTTGAAGAAAAAACTGAAGAATCAGTCATTGAACAGAAACCTGATGTACCAGCAGTTAAGGAGAAACCTGAAGAACCAACATTTGAGGAGAAATCTGAAGTACTGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E443526" ref_strand="+" ref_description="SGN-E443526 [cSTA-38-D6]">
      <seq>gaaaaaccagcagtaatggaggaggagaaacctttaacagaagggcttctggagaagaatttgccaattgtagactcaaaggacaagatagacgatgcaattccatgcaataccaccaataatgatattgctaactatgcatcagttgaggaaaaacctaacgaaccagtagttggaaaaacacatgaagaattagcaattgaagataaatctgaagaatcagttgtttcggagaagcttgaagaactagtggttgagaaaaaaactgaacaaccgacagttgaagagaaacctgaaaaaccagcagttggagagaaacatgaagaaccagccgttgaagaggagaaacctgaaaaaactatgctaattgtagacttgaacgacaaaactggtagtgaaattccatgcaataccggtaatgatgttgctcactttccagacattgaggaaaatcctgaagtgtcggcagttgaagaaaaaactgaagaatcagtcattgaacagaaacctgatgtaccagcagttaaggagaaacctgaagaaccaacatttgaggagaaatctgaagtac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0180C05.2" temp_strand="+" temp_description="C02HBa0180C05.2  AC215411.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0180C05 sequenced_by:kribb upload_account_name:korea">
        <position start="139527" stop="140917"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="139827" g_stop="139883" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="57" r_length="57" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="139884" i_stop="139998" i_length="115">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="139999" g_stop="140289" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="58" r_stop="357" r_length="300" r_score="0.914"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="140290" i_stop="140403" i_length="114">
            <donor d_prob="0.996" d_score="0.98"/>
            <acceptor a_prob="0.927" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="140404" g_stop="140617" g_length="214"/>
          <reference_exon_boundary r_type="cDNA" r_start="358" r_stop="571" r_length="214" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0180C05.2" gen_strand="+" ref_id="SGN-E443526" ref_strand="+">
        <total_alignment_score>0.929</total_alignment_score>
        <cumulative_length_of_scored_exons>562</cumulative_length_of_scored_exons>
        <coverage percentage="0.984" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0180C05.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E443526" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="139827" e_stop="139883"/>
          <exon e_start="139999" e_stop="140289"/>
          <exon e_start="140404" e_stop="140617"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAAACCAGCAGTAATGGAGGAGGAGAAACTTTTAACAGAAGGGCTTCTGGAGAAGGTGAAGATTAAACACTACCACAAAGTCTATCCATCATATTAGCTTTATATGTGCAATAAATTTACATCTGTTCATCTGTCAAAAGACTAAGTGAAACTTCATTTTTTTTTTGCAGAATTTGCCAATTGTAGACTCAAAGGACAAGATAGACGATGCAAATCCATGCAATACCACCAACAATGATATTGCTAACTATGCATCAGTTGAGGAAAAACCTGACGAACCAGTAATTGGAAAAACACATGAAGAATTAGCAATTGAAGATAAATCTGAAGAATCAGTTGTTTCGGAGAAGCTTGAAGAACTAATGGTT--G-------CTGAACAACCGACAGTTGAAGAGAAACCTCAAAAACCAGCAGTTGGGGAGAAACATGAAGAACCAGCCGTTGAAGAGGAGAAACCTGAAAAAGTATGGGTCATGCACTATCACAAAGTTTATCCATTTTGTTAGTTATGTATGTACTGTGATTCACATCTGCTTCTATATTGGAAGGCAAAGTAAAACATTAAATTCATTTTGCAGAATATGCTAATTGTAGACTTGAACAACAAAACTGGTAGTGAAATTCCATGCAATGCCGGTAATGATGTTGCACACTTTTCAGACACCGAGGAAAATCCTGAAGAATCGGCATTTCAAGAAAAAACTGAAGAATCAGTCATTGAACAGCAACCTGATGTACCAGCAGTTAAGGAGAAACCTGAAGAACCAACACTTGAGGAGAAAACTGAAGTAC</genome_strand>
        <mrna_strand>GAAAAACCAGCAGTAATGGAGGAGGAGAAACCTTTAACAGAAGGGCTTCTGGAGAAG...................................................................................................................AATTTGCCAATTGTAGACTCAAAGGACAAGATAGACGATGCAATTCCATGCAATACCACCAATAATGATATTGCTAACTATGCATCAGTTGAGGAAAAACCTAACGAACCAGTAGTTGGAAAAACACATGAAGAATTAGCAATTGAAGATAAATCTGAAGAATCAGTTGTTTCGGAGAAGCTTGAAGAACTAGTGGTTGAGAAAAAAACTGAACAACCGACAGTTGAAGAGAAACCTGAAAAACCAGCAGTTGGAGAGAAACATGAAGAACCAGCCGTTGAAGAGGAGAAACCTGAAAAA..................................................................................................................ACTATGCTAATTGTAGACTTGAACGACAAAACTGGTAGTGAAATTCCATGCAATACCGGTAATGATGTTGCTCACTTTCCAGACATTGAGGAAAATCCTGAAGTGTCGGCAGTTGAAGAAAAAACTGAAGAATCAGTCATTGAACAGAAACCTGATGTACCAGCAGTTAAGGAGAAACCTGAAGAACCAACATTTGAGGAGAAATCTGAAGTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E590485" ref_strand="-" ref_description="SGN-E590485 [44081]">
      <seq>ggttgagaaaatacctgaacaaccgacagttgaagaaaaacctgaaaaaccaaccgtgggagaaaagcttgaagtaccatcagttgaggagacaatcaaagaaccaaaaattgaggagaaacctgaaaaacaagtaattgaagaaacacctaaggaactagcatttgaagagatacatgaagaaccagccatggaagaggagaaacctgaaaaggtaactcttttggaaaagaatatgctaattgtagactcgaacgaaaaaactggcagtgaaatcccatgcaataccaataatgatgctgcacactctccagacagtgaggaaaatcctgaagaatcggcagttgaagaaaaaactgaagaaccactcattgaagagaaacctggtgtacccagctattaaggagaaacgctgaagaaccaacatttgaggagaaatctgaagtagccagttgagggagaaaccgtgaactacgcgattaccagagaaacctgaagaacccggcgactatagaaacacctgaagagcttgcaggggaggaaacacctgaagaactagctcttgaagagaaacctgaagaaccaacagttgaagacacatctgaagaactagttgttgaaaaaaaaaaaaaaaaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0180C05-Sxn9a/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02HBa0180C05.2" temp_strand="+" temp_description="C02HBa0180C05.2  AC215411.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0180C05 sequenced_by:kribb upload_account_name:korea">
        <position start="140829" stop="142174"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="141129" g_stop="141360" g_length="232"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="232" r_length="232" r_score="0.931"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="141361" i_stop="141473" i_length="113">
            <donor d_prob="0.998" d_score="0.94"/>
            <acceptor a_prob="0.989" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="141474" g_stop="141874" g_length="401"/>
          <reference_exon_boundary r_type="cDNA" r_start="233" r_stop="638" r_length="406" r_score="0.898"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0180C05.2" gen_strand="+" ref_id="SGN-E590485" ref_strand="-">
        <total_alignment_score>0.910</total_alignment_score>
        <cumulative_length_of_scored_exons>633</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0180C05.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E590485" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="141129" e_stop="141360"/>
          <exon e_start="141474" e_stop="141874"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTTGAGAAAATTCCTGAACAGCCGACAATTGAAGAGAAACCTGAAAACCCAACCGTGGGAGAAGAGTTTGAATTACCATCAGTTGAGGAGACAATCGAAGAACCAAAAATCGAGGAGAAACCTGAAAAACAAGTAATTGAAGAAACACCCAAGGAACTAGCAGTTGAAGAGATGCATGAAGAAACAGCCGTGGAAGAGGAGAAACCTGAAAAGGTAACTCTTTCGGAAAAGGTAAGGGTCAAGCACTATCACAAAGTTAATCCATTTTGTTAGTTAGTATGTACTATGACTCACATCTGCGTCTTTATTGAAAGACTAAGTGAAACAATAAATTCTTTTTGCAGAATATGCTAATTGTAGACTCAACTGAAAAAACCGGCAGTGAAATCCCATGCAATACCAATAATGATGTTGAATACTCTCCAGACAGTGAGGAAAATCCTGAAGAATCGGCAGTTGAAGAAAAAACTGAAGAACCACTCATTGAAGAGAAACCTGATGTA-CCAGCTATTAAGGAGAAAC-CCAAAGAACCAACATTTGAGGAGAAATCTGAAGTA-CCAGTTGA-GGAGAAACCTGAAGAACTA-GAGATGA-CAGAGAAACCTGAAGAA-CCAGCGGCTATAGAAACACCTGAAGAGCTTGCAGGGCAGGAAATACCTGAAGAACTAGACCTTGAAGAGAAACCTGAAGAACCAACAGTTGAAGACACATCTGAAGAACTAGTTGTTGAAAAGAAAGATGAGAAACC</genome_strand>
        <mrna_strand>GGTTGAGAAAATACCTGAACAACCGACAGTTGAAGAAAAACCTGAAAAACCAACCGTGGGAGAAAAGCTTGAAGTACCATCAGTTGAGGAGACAATCAAAGAACCAAAAATTGAGGAGAAACCTGAAAAACAAGTAATTGAAGAAACACCTAAGGAACTAGCATTTGAAGAGATACATGAAGAACCAGCCATGGAAGAGGAGAAACCTGAAAAGGTAACTCTTTTGGAAAAG.................................................................................................................AATATGCTAATTGTAGACTCGAACGAAAAAACTGGCAGTGAAATCCCATGCAATACCAATAATGATGCTGCACACTCTCCAGACAGTGAGGAAAATCCTGAAGAATCGGCAGTTGAAGAAAAAACTGAAGAACCACTCATTGAAGAGAAACCTGGTGTACCCAGCTATTAAGGAGAAACGCTGAAGAACCAACATTTGAGGAGAAATCTGAAGTAGCCAGTTGAGGGAGAAACC-G-TGAACTACGCGATTACCAGAGAAACCTGAAGAACCCGGCGACTATAGAAACACCTGAAGAGCTTGCAGGGGAGGAAACACCTGAAGAACTAGCTCTTGAAGAGAAACCTGAAGAACCAACAGTTGAAGACACATCTGAAGAACTAGTTGTTGAAAAAAAAAAAAAAAAAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>56</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="7800" PGL_stop="6477"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="7800" e_stop="7564"/>
            <exon e_start="7483" e_stop="6753"/>
            <exon e_start="6562" e_stop="6477"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.982" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.996" e_score="1.000"/>
          <exon-only e_score="0.988"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="7800" e_stop="7564" e_length="237"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.982">
            <gDNA_intron_boundary i_start="7563" i_stop="7484" i_length="80"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="7483" e_stop="6753" e_length="731"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.996">
            <gDNA_intron_boundary i_start="6752" i_stop="6563" i_length="190"/>
          </intron>
          <exon e_serial="3" e_score="0.988">
            <gDNA_exon_boundary e_start="6562" e_stop="6477" e_length="86"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7800" stop="7564"/>
              <exon start="7483" stop="7125"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E204396" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7800" stop="7564"/>
              <exon start="7483" stop="7233"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E247991" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7798" stop="7564"/>
              <exon start="7483" stop="7148"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E211850" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7794" stop="7564"/>
              <exon start="7483" stop="6991"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E210626" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7756" stop="7564"/>
              <exon start="7483" stop="7217"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E271837" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7659" stop="7564"/>
              <exon start="7483" stop="7048"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E207107" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7442" stop="7101"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E257602" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7252" stop="6753"/>
              <exon start="6562" stop="6477"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E205913" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCAACTTTGTGTGTCTCATTCTTCGCCTCTTAAATAGCACTCTCTATCTAAATTTTAATTCTCATCTCTTTTAGTATTTGCATTTTAGCTACTACTCATAAGTAGTTGCCAAAAGAAAAAATTAAAGCAAAATTTATCGTGCTGCCATGGCTGTCGAGGAACTCTCGGTTGTTCTCCCCCGCGTGCTCATTGTCTCTAGACGTACCGTTCGTAAGAACAAATTTGTTGATTTTGTTG : GAGAATATCATCTCGATCTTATAGTAAGCTATGGAGCTGTTCCGGTGATTGTACCCAGAGTTTCCGGGGTACATTTGTTATTAGACAGTTTTGAACCAATTCATGGTGTTCTTCTCTGTGAAGGAGAGGATATCGATCCTTCTCTGTACAACGATGAACTATCCGATCTCTCCGTAGAAGAATTGGAAGAAATTAGGAGATTGCACGCTAGCGACACTGCAATTGACAAGGAAAAAGACACAATTGAACTCAGATTGGCTAAGCTCTGTCTAGAAAGGAACATTCCCTATTTGGGAATATGCAGGGGTTCACAGGTACTGAATGTTGCATGTGGGGGAACTCTTATACAAGACATTGGAAAAGAAATATCGAAAAACCTTCCTGAGAATCAGAGGGTAGTTCATATGGATTACGATAACTATGATGGTCATAGACATGTTATACAAGTTGTCGAGGAAACGCCATTGCACCATTGGTTCAAGGACTCGTTGGAAGACGAAAAAATGGAGATTTCAGTCAATAGTTATCATCATCAAGGAGTTAAAAAATTGGCTCAGAGATTTGTTCCTATGGCATTTGCCCCTGATGGTTTAATTGAAGGATTCTATGATCCAGATGCTTATAATCCTGTTGAGGGTAAGTTTATTATGGGACTTCAATTTCATCCGGAACGAATGAGACAAGAAGATAGTGATGAATTTGATTATCCTGGATGTACATTTGCTTATCAG : GAGTTTGTGAAGGCTGTAGTTGCATATCAGAAAAAACTGTTAAGCACAACCACAATCGAAAAGCCATTGAAGCTTAATCAAGAAAT</gDNA_template>
            <first_frame> S  T  L  C  V  S  F  F  A  S  *  I  A  L  S  I  *  I  L  I  L  I  S  F  S  I  C  I  L  A  T  T  H  K  *  L  P  K  E  K  I  K  A  K  F  I  V  L  P  W  L  S  R  N  S  R  L  F  S  P  A  C  S  L  S  L  D  V  P  F  V  R  T  N  L  L  I  L  L  :  E  N  I  I  S  I  L  *  *  A  M  E  L  F  R  *  L  Y  P  E  F  P  G  Y  I  C  Y  *  T  V  L  N  Q  F  M  V  F  F  S  V  K  E  R  I  S  I  L  L  C  T  T  M  N  Y  P  I  S  P  *  K  N  W  K  K  L  G  D  C  T  L  A  T  L  Q  L  T  R  K  K  T  Q  L  N  S  D  W  L  S  S  V  *  K  G  T  F  P  I  W  E  Y  A  G  V  H  R  Y  *  M  L  H  V  G  E  L  L  Y  K  T  L  E  K  K  Y  R  K  T  F  L  R  I  R  G  *  F  I  W  I  T  I  T  M  M  V  I  D  M  L  Y  K  L  S  R  K  R  H  C  T  I  G  S  R  T  R  W  K  T  K  K  W  R  F  Q  S  I  V  I  I  I  K  E  L  K  N  W  L  R  D  L  F  L  W  H  L  P  L  M  V  *  L  K  D  S  M  I  Q  M  L  I  I  L  L  R  V  S  L  L  W  D  F  N  F  I  R  N  E  *  D  K  K  I  V  M  N  L  I  I  L  D  V  H  L  L  I  R :   S  L  *  R  L  *  L  H  I  R  K  N  C  *  A  Q  P  Q  S  K  S  H  *  S  L  I  K  K  </first_frame>
            <second_frame>  Q  L  C  V  S  H  S  S  P  L  K  *  H  S  L  S  K  F  *  F  S  S  L  L  V  F  A  F  *  L  L  L  I  S  S  C  Q  K  K  K  L  K  Q  N  L  S  C  C  H  G  C  R  G  T  L  G  C  S  P  P  R  A  H  C  L  *  T  Y  R  S  *  E  Q  I  C  *  F  C  W :   R  I  S  S  R  S  Y  S  K  L  W  S  C  S  G  D  C  T  Q  S  F  R  G  T  F  V  I  R  Q  F  *  T  N  S  W  C  S  S  L  *  R  R  G  Y  R  S  F  S  V  Q  R  *  T  I  R  S  L  R  R  R  I  G  R  N  *  E  I  A  R  *  R  H  C  N  *  Q  G  K  R  H  N  *  T  Q  I  G  *  A  L  S  R  K  E  H  S  L  F  G  N  M  Q  G  F  T  G  T  E  C  C  M  W  G  N  S  Y  T  R  H  W  K  R  N  I  E  K  P  S  *  E  S  E  G  S  S  Y  G  L  R  *  L  *  W  S  *  T  C  Y  T  S  C  R  G  N  A  I  A  P  L  V  Q  G  L  V  G  R  R  K  N  G  D  F  S  Q  *  L  S  S  S  R  S  *  K  I  G  S  E  I  C  S  Y  G  I  C  P  *  W  F  N  *  R  I  L  *  S  R  C  L  *  S  C  *  G  *  V  Y  Y  G  T  S  I  S  S  G  T  N  E  T  R  R  *  *  *  I  *  L  S  W  M  Y  I  C  L  S   : G  V  C  E  G  C  S  C  I  S  E  K  T  V  K  H  N  H  N  R  K  A  I  E  A  *  S  R  N </second_frame>
            <third_frame>   N  F  V  C  L  I  L  R  L  L  N  S  T  L  Y  L  N  F  N  S  H  L  F  *  Y  L  H  F  S  Y  Y  S  *  V  V  A  K  R  K  N  *  S  K  I  Y  R  A  A  M  A  V  E  E  L  S  V  V  L  P  R  V  L  I  V  S  R  R  T  V  R  K  N  K  F  V  D  F  V   : G  E  Y  H  L  D  L  I  V  S  Y  G  A  V  P  V  I  V  P  R  V  S  G  V  H  L  L  L  D  S  F  E  P  I  H  G  V  L  L  C  E  G  E  D  I  D  P  S  L  Y  N  D  E  L  S  D  L  S  V  E  E  L  E  E  I  R  R  L  H  A  S  D  T  A  I  D  K  E  K  D  T  I  E  L  R  L  A  K  L  C  L  E  R  N  I  P  Y  L  G  I  C  R  G  S  Q  V  L  N  V  A  C  G  G  T  L  I  Q  D  I  G  K  E  I  S  K  N  L  P  E  N  Q  R  V  V  H  M  D  Y  D  N  Y  D  G  H  R  H  V  I  Q  V  V  E  E  T  P  L  H  H  W  F  K  D  S  L  E  D  E  K  M  E  I  S  V  N  S  Y  H  H  Q  G  V  K  K  L  A  Q  R  F  V  P  M  A  F  A  P  D  G  L  I  E  G  F  Y  D  P  D  A  Y  N  P  V  E  G  K  F  I  M  G  L  Q  F  H  P  E  R  M  R  Q  E  D  S  D  E  F  D  Y  P  G  C  T  F  A  Y  Q  :  E  F  V  K  A  V  V  A  Y  Q  K  K  L  L  S  T  T  T  I  E  K  P  L  K  L  N  Q  E   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0180C05.2" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="7675" stop="7564"/>
                    <exon start="7483" stop="6753"/>
                    <exon start="6562" stop="6479"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>927</number_coding_nucleotides>
                  <number_encoded_amino_acids>309</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SKIYRAAMAVEELSVVLPRVLIVSRRTVRKNKFVDFVGEYHLDLIVSYGAVPVIVPRVSGVHLLLDSFEPIHGVLLCEGEDIDPSLYNDELSDLSVEELEEIRRLHASDTAIDKEKDTIELRLAKLCLERNIPYLGICRGSQVLNVACGGTLIQDIGKEISKNLPENQRVVHMDYDNYDGHRHVIQVVEETPLHHWFKDSLEDEKMEISVNSYHHQGVKKLAQRFVPMAFAPDGLIEGFYDPDAYNPVEGKFIMGLQFHPERMRQEDSDEFDYPGCTFAYQEFVKAVVAYQKKLLSTTTIEKPLKLNQE</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="14403" PGL_stop="13894"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="14403" e_stop="13894"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="14403" e_stop="13894" e_length="510"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14403" stop="13895"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E723016" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14402" stop="13944"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E721305" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14394" stop="13898"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E718465" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14393" stop="13898"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E721627" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14388" stop="13898"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E717363" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14387" stop="13894"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E723174" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14386" stop="13894"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E723701" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14381" stop="13898"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E723455" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14374" stop="13922"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716483" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14373" stop="13944"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716185" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14372" stop="13898"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E714551" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14362" stop="13963"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E337220" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14213" stop="13950"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E396922" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTCACTACTTCATCCATCACTTCCATTACATTACTTAAAAAATTTCTCTTATAATTTAAATTGTATAATGAAAATGACTAAGGTTTGTTCTTTTGTGGCAGTAATGTTGGTGATGATCCTTGTTTGTGATCAATTTGGGGCTAACGAGGCGGCGACATGCAGCGCCTCGCAGCTGAGCCCGTGTTTGGGTGCGATCCAGGGTGGGACCGCACCATCACAGGATTGTTGTGCTAGGCTTAAGAACCAGCAGCCTTGCATTTGTGGATTTATGAAGGATCCTAATTTGAGGCAATATGTTAATTCTCCAAATGCTAGGAAAGTTGCTGGACAATGTGGTGTAAGCATTCCTAGTTGTTAATTAGGTTTACAACATTTTACTTGTTGTATACATATGGGTCTTATGTATTATGGAAAAAAATATATATATGTAAGACTTTAAATAAAAAATGGTTGTAATCTGTGTTCAAGTGTGTTATGATGAATGAATCTTGTGGCTTTTGATTTTATTT</gDNA_template>
            <first_frame> F  H  Y  F  I  H  H  F  H  Y  I  T  *  K  I  S  L  I  I  *  I  V  *  *  K  *  L  R  F  V  L  L  W  Q  *  C  W  *  *  S  L  F  V  I  N  L  G  L  T  R  R  R  H  A  A  P  R  S  *  A  R  V  W  V  R  S  R  V  G  P  H  H  H  R  I  V  V  L  G  L  R  T  S  S  L  A  F  V  D  L  *  R  I  L  I  *  G  N  M  L  I  L  Q  M  L  G  K  L  L  D  N  V  V  *  A  F  L  V  V  N  *  V  Y  N  I  L  L  V  V  Y  I  W  V  L  C  I  M  E  K  N  I  Y  M  *  D  F  K  *  K  M  V  V  I  C  V  Q  V  C  Y  D  E  *  I  L  W  L  L  I  L  F </first_frame>
            <second_frame>  F  T  T  S  S  I  T  S  I  T  L  L  K  K  F  L  L  *  F  K  L  Y  N  E  N  D  *  G  L  F  F  C  G  S  N  V  G  D  D  P  C  L  *  S  I  W  G  *  R  G  G  D  M  Q  R  L  A  A  E  P  V  F  G  C  D  P  G  W  D  R  T  I  T  G  L  L  C  *  A  *  E  P  A  A  L  H  L  W  I  Y  E  G  S  *  F  E  A  I  C  *  F  S  K  C  *  E  S  C  W  T  M  W  C  K  H  S  *  L  L  I  R  F  T  T  F  Y  L  L  Y  T  Y  G  S  Y  V  L  W  K  K  I  Y  I  C  K  T  L  N  K  K  W  L  *  S  V  F  K  C  V  M  M  N  E  S  C  G  F  *  F  Y   </second_frame>
            <third_frame>   S  L  L  H  P  S  L  P  L  H  Y  L  K  N  F  S  Y  N  L  N  C  I  M  K  M  T  K  V  C  S  F  V  A  V  M  L  V  M  I  L  V  C  D  Q  F  G  A  N  E  A  A  T  C  S  A  S  Q  L  S  P  C  L  G  A  I  Q  G  G  T  A  P  S  Q  D  C  C  A  R  L  K  N  Q  Q  P  C  I  C  G  F  M  K  D  P  N  L  R  Q  Y  V  N  S  P  N  A  R  K  V  A  G  Q  C  G  V  S  I  P  S  C  *  L  G  L  Q  H  F  T  C  C  I  H  M  G  L  M  Y  Y  G  K  K  Y  I  Y  V  R  L  *  I  K  N  G  C  N  L  C  S  S  V  L  *  *  M  N  L  V  A  F  D  F  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0180C05.2" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="14401" stop="14045"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>354</number_coding_nucleotides>
                  <number_encoded_amino_acids>118</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SLLHPSLPLHYLKNFSYNLNCIMKMTKVCSFVAVMLVMILVCDQFGANEAATCSASQLSPCLGAIQGGTAPSQDCCARLKNQQPCICGFMKDPNLRQYVNSPNARKVAGQCGVSIPSC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="21125" PGL_stop="17202"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="20717" e_stop="20580"/>
            <exon e_start="20493" e_stop="20279"/>
            <exon e_start="20163" e_stop="20046"/>
            <exon e_start="19959" e_stop="19827"/>
            <exon e_start="19731" e_stop="19536"/>
            <exon e_start="19457" e_stop="19352"/>
            <exon e_start="19273" e_stop="19133"/>
            <exon e_start="19038" e_stop="18915"/>
            <exon e_start="18797" e_stop="18314"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.934" e_score="1.000"/>
          <exon-intron don_prob="0.948" acc_prob="0.978" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.994" e_score="0.981"/>
          <exon-intron don_prob="0.431" acc_prob="0.944" e_score="1.000"/>
          <exon-intron don_prob="0.843" acc_prob="0.928" e_score="0.960"/>
          <exon-intron don_prob="0.979" acc_prob="0.900" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="20717" e_stop="20580" e_length="138"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.000">
            <gDNA_intron_boundary i_start="20579" i_stop="20494" i_length="86"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="20493" e_stop="20279" e_length="215"/>
          </exon>
          <intron i_serial="2" don_prob="0.993" acc_prob="0.934">
            <gDNA_intron_boundary i_start="20278" i_stop="20164" i_length="115"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="20163" e_stop="20046" e_length="118"/>
          </exon>
          <intron i_serial="3" don_prob="0.948" acc_prob="0.978">
            <gDNA_intron_boundary i_start="20045" i_stop="19960" i_length="86"/>
          </intron>
          <exon e_serial="4" e_score="0.981">
            <gDNA_exon_boundary e_start="19959" e_stop="19827" e_length="133"/>
          </exon>
          <intron i_serial="4" don_prob="0.996" acc_prob="0.994">
            <gDNA_intron_boundary i_start="19826" i_stop="19732" i_length="95"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="19731" e_stop="19536" e_length="196"/>
          </exon>
          <intron i_serial="5" don_prob="0.431" acc_prob="0.944">
            <gDNA_intron_boundary i_start="19535" i_stop="19458" i_length="78"/>
          </intron>
          <exon e_serial="6" e_score="0.960">
            <gDNA_exon_boundary e_start="19457" e_stop="19352" e_length="106"/>
          </exon>
          <intron i_serial="6" don_prob="0.843" acc_prob="0.928">
            <gDNA_intron_boundary i_start="19351" i_stop="19274" i_length="78"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="19273" e_stop="19133" e_length="141"/>
          </exon>
          <intron i_serial="7" don_prob="0.979" acc_prob="0.900">
            <gDNA_intron_boundary i_start="19132" i_stop="19039" i_length="94"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="19038" e_stop="18915" e_length="124"/>
          </exon>
          <intron i_serial="8" don_prob="0.900" acc_prob="0.000">
            <gDNA_intron_boundary i_start="18914" i_stop="18798" i_length="117"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="18797" e_stop="18314" e_length="484"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20717" stop="20580"/>
              <exon start="20493" stop="20279"/>
              <exon start="20163" stop="20046"/>
              <exon start="19959" stop="19827"/>
              <exon start="19731" stop="19667"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E539486" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20716" stop="20580"/>
              <exon start="20493" stop="20302"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E282574" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19932" stop="19827"/>
              <exon start="19731" stop="19536"/>
              <exon start="19457" stop="19357"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E235967" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19404" stop="19352"/>
              <exon start="19273" stop="19133"/>
              <exon start="19038" stop="18915"/>
              <exon start="18797" stop="18314"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E704984" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTCAATTGGTGTGTGATCCATCTGGAGTGGTAGTGGAAACAACAATCAAGGAACTTGTTCCAGCTTTAGTAAACTGGGGGAAGGAATTGGATCATTTACTACAAGTCTTACTATCTCATGCTTTGGGCTCTGCTCAG : CGTTGTCAACCACTTTCAGGGGTGGAAGGTTCTATCGAGTCACATCTTCGTGCTTTAGGAGAGAGAGAGCGATGGAACATAGATGTTCTGATGCGCTTACTGTCGGAGTTGTTTCCATTTGTACGCAAGAAAGCTATTGATACCTGTCCATTCCCATTGGTTTCGGACGATGAAAGACTAGTCTTTTCTACTTCAGTTCTTGAACAGTATGCTGG : AGGAAAGATGGACTGGCCTTCTTTTGAGTGGTTGCATATTGACTGCTTTTCAGCGTTGATTGAACTAGCCTCTCTATTACCTCAGAAGGAAGATAACCTAAGGAATCGAATCACGCGG : TTTTTATTGGCAGTTTCAGACCTGCTCGGGGAACCTTACCTGACACACATCATGCTACCTGTATTCTTGGTGGCAGTTGGTGATGATGGTGATTTATCATATTTCCCTGCAACGTGCCAATCAAGAATAAGAG : GTTTGAAACCGAAAACTGCAGTAGCTGAAAGACTTGCTACCATCGGTGTCCTGCCTCTTCTGCTGGCTGGTGTTTTAGGATCTCCTAGGAAGCATGAACTACTGACAGAGTACTTGAGAAATCTCTTGATTCAAACTTCAGGACAAGAGAGTCAGACAGTGAAGCGCGAGATTTTCTTTTCTGTTCGCTTTCTTTG : CACTTTCGATGAACATCACAATATGATTTTTAACATCCTCTGGGAAATGGTTGTGAGTTCTGAAATAAACATGAAGGCAACAGCTGCCAATCTTTTTAAAGTCATT : GTTCCATGTATTGATGCCAAGGTTGCCTCAACACATGTTTTGCCTGCTCTTGTAACGCTTGGTTCTGACCAAAACTTGAATGTGAAATATGCCAGTATTGATGCTTTTGGAGCTGTGGCGCAGCAGTATAAAAATGATGCG : ATTGTTGATAAAATACGTGTTCAAATGGATGCTTTTCTTGAGGATGGATCACATGAAGCTACGTTAGCTGTAGTTCGTGCATTGGTGATGGCAGTGCCACATACCACGGAGGGACTTAGAGATT : ATTTGTTGTCCAAGATTTTCTTACTTACAGCAACACCTCCTCCTTCAAGTGACATGATGCGTCGTCGTGAGAGAGCCAACACATTTTGTGAATCAATTCGTGCTCTTGATGCTACTGGTTTGCTCCTTTTAATTATTCTTCTTCTCTTTCATTCATCTCTTTACTTTCTGAAGATATAAATGTTCTTCAAAATGATCAGCCTCCAGGTTTAGCTGCTTCTTGAGATAAATCAGAGTACAATATACTATGTATTGCAGTGGACTGATACAGGTGGTTGATATCCTGATTTTTGGTTGTGAAACTACCTTTAGCAATCATGGTTGATCAAAGTGATTAGTTGAGTTTTTTCCCATCTAAGAAGAGTTAATTACCTAAAAATTGACCGATTTTTTACCTAAATACATGCCGAAGTTAACATAAATGGTTGATTGTGATTTGTTGGGTTTAGTGTGCATCCTTTTCTTGTTCATATTAATACAAGTGA</gDNA_template>
            <first_frame> F  Q  L  V  C  D  P  S  G  V  V  V  E  T  T  I  K  E  L  V  P  A  L  V  N  W  G  K  E  L  D  H  L  L  Q  V  L  L  S  H  A  L  G  S  A  Q  :  R  C  Q  P  L  S  G  V  E  G  S  I  E  S  H  L  R  A  L  G  E  R  E  R  W  N  I  D  V  L  M  R  L  L  S  E  L  F  P  F  V  R  K  K  A  I  D  T  C  P  F  P  L  V  S  D  D  E  R  L  V  F  S  T  S  V  L  E  Q  Y  A  G :   G  K  M  D  W  P  S  F  E  W  L  H  I  D  C  F  S  A  L  I  E  L  A  S  L  L  P  Q  K  E  D  N  L  R  N  R  I  T  R  :  F  L  L  A  V  S  D  L  L  G  E  P  Y  L  T  H  I  M  L  P  V  F  L  V  A  V  G  D  D  G  D  L  S  Y  F  P  A  T  C  Q  S  R  I  R   : G  L  K  P  K  T  A  V  A  E  R  L  A  T  I  G  V  L  P  L  L  L  A  G  V  L  G  S  P  R  K  H  E  L  L  T  E  Y  L  R  N  L  L  I  Q  T  S  G  Q  E  S  Q  T  V  K  R  E  I  F  F  S  V  R  F  L  C :   T  F  D  E  H  H  N  M  I  F  N  I  L  W  E  M  V  V  S  S  E  I  N  M  K  A  T  A  A  N  L  F  K  V  I  :  V  P  C  I  D  A  K  V  A  S  T  H  V  L  P  A  L  V  T  L  G  S  D  Q  N  L  N  V  K  Y  A  S  I  D  A  F  G  A  V  A  Q  Q  Y  K  N  D  A  :  I  V  D  K  I  R  V  Q  M  D  A  F  L  E  D  G  S  H  E  A  T  L  A  V  V  R  A  L  V  M  A  V  P  H  T  T  E  G  L  R  D   : Y  L  L  S  K  I  F  L  L  T  A  T  P  P  P  S  S  D  M  M  R  R  R  E  R  A  N  T  F  C  E  S  I  R  A  L  D  A  T  G  L  L  L  L  I  I  L  L  L  F  H  S  S  L  Y  F  L  K  I  *  M  F  F  K  M  I  S  L  Q  V  *  L  L  L  E  I  N  Q  S  T  I  Y  Y  V  L  Q  W  T  D  T  G  G  *  Y  P  D  F  W  L  *  N  Y  L  *  Q  S  W  L  I  K  V  I  S  *  V  F  S  H  L  R  R  V  N  Y  L  K  I  D  R  F  F  T  *  I  H  A  E  V  N  I  N  G  *  L  *  F  V  G  F  S  V  H  P  F  L  V  H  I  N  T  S   </first_frame>
            <second_frame>  F  N  W  C  V  I  H  L  E  W  *  W  K  Q  Q  S  R  N  L  F  Q  L  *  *  T  G  G  R  N  W  I  I  Y  Y  K  S  Y  Y  L  M  L  W  A  L  L  S :   V  V  N  H  F  Q  G  W  K  V  L  S  S  H  I  F  V  L  *  E  R  E  S  D  G  T  *  M  F  *  C  A  Y  C  R  S  C  F  H  L  Y  A  R  K  L  L  I  P  V  H  S  H  W  F  R  T  M  K  D  *  S  F  L  L  Q  F  L  N  S  M  L   : E  E  R  W  T  G  L  L  L  S  G  C  I  L  T  A  F  Q  R  *  L  N  *  P  L  Y  Y  L  R  R  K  I  T  *  G  I  E  S  R  G :   F  Y  W  Q  F  Q  T  C  S  G  N  L  T  *  H  T  S  C  Y  L  Y  S  W  W  Q  L  V  M  M  V  I  Y  H  I  S  L  Q  R  A  N  Q  E  *  E  :  V  *  N  R  K  L  Q  *  L  K  D  L  L  P  S  V  S  C  L  F  C  W  L  V  F  *  D  L  L  G  S  M  N  Y  *  Q  S  T  *  E  I  S  *  F  K  L  Q  D  K  R  V  R  Q  *  S  A  R  F  S  F  L  F  A  F  F   : A  L  S  M  N  I  T  I  *  F  L  T  S  S  G  K  W  L  *  V  L  K  *  T  *  R  Q  Q  L  P  I  F  L  K  S  L :   F  H  V  L  M  P  R  L  P  Q  H  M  F  C  L  L  L  *  R  L  V  L  T  K  T  *  M  *  N  M  P  V  L  M  L  L  E  L  W  R  S  S  I  K  M  M  R :   L  L  I  K  Y  V  F  K  W  M  L  F  L  R  M  D  H  M  K  L  R  *  L  *  F  V  H  W  *  W  Q  C  H  I  P  R  R  D  L  E  I  :  I  C  C  P  R  F  S  Y  L  Q  Q  H  L  L  L  Q  V  T  *  C  V  V  V  R  E  P  T  H  F  V  N  Q  F  V  L  L  M  L  L  V  C  S  F  *  L  F  F  F  S  F  I  H  L  F  T  F  *  R  Y  K  C  S  S  K  *  S  A  S  R  F  S  C  F  L  R  *  I  R  V  Q  Y  T  M  Y  C  S  G  L  I  Q  V  V  D  I  L  I  F  G  C  E  T  T  F  S  N  H  G  *  S  K  *  L  V  E  F  F  P  I  *  E  E  L  I  T  *  K  L  T  D  F  L  P  K  Y  M  P  K  L  T  *  M  V  D  C  D  L  L  G  L  V  C  I  L  F  L  F  I  L  I  Q  V  </second_frame>
            <third_frame>   S  I  G  V  *  S  I  W  S  G  S  G  N  N  N  Q  G  T  C  S  S  F  S  K  L  G  E  G  I  G  S  F  T  T  S  L  T  I  S  C  F  G  L  C  S   : A  L  S  T  T  F  R  G  G  R  F  Y  R  V  T  S  S  C  F  R  R  E  R  A  M  E  H  R  C  S  D  A  L  T  V  G  V  V  S  I  C  T  Q  E  S  Y  *  Y  L  S  I  P  I  G  F  G  R  *  K  T  S  L  F  Y  F  S  S  *  T  V  C  W  :  R  K  D  G  L  A  F  F  *  V  V  A  Y  *  L  L  F  S  V  D  *  T  S  L  S  I  T  S  E  G  R  *  P  K  E  S  N  H  A   : V  F  I  G  S  F  R  P  A  R  G  T  L  P  D  T  H  H  A  T  C  I  L  G  G  S  W  *  *  W  *  F  I  I  F  P  C  N  V  P  I  K  N  K  R :   F  E  T  E  N  C  S  S  *  K  T  C  Y  H  R  C  P  A  S  S  A  G  W  C  F  R  I  S  *  E  A  *  T  T  D  R  V  L  E  K  S  L  D  S  N  F  R  T  R  E  S  D  S  E  A  R  D  F  L  F  C  S  L  S  L  :  H  F  R  *  T  S  Q  Y  D  F  *  H  P  L  G  N  G  C  E  F  *  N  K  H  E  G  N  S  C  Q  S  F  *  S  H   : C  S  M  Y  *  C  Q  G  C  L  N  T  C  F  A  C  S  C  N  A  W  F  *  P  K  L  E  C  E  I  C  Q  Y  *  C  F  W  S  C  G  A  A  V  *  K  *  C   : D  C  *  *  N  T  C  S  N  G  C  F  S  *  G  W  I  T  *  S  Y  V  S  C  S  S  C  I  G  D  G  S  A  T  Y  H  G  G  T  *  R  L :   F  V  V  Q  D  F  L  T  Y  S  N  T  S  S  F  K  *  H  D  A  S  S  *  E  S  Q  H  I  L  *  I  N  S  C  S  *  C  Y  W  F  A  P  F  N  Y  S  S  S  L  S  F  I  S  L  L  S  E  D  I  N  V  L  Q  N  D  Q  P  P  G  L  A  A  S  *  D  K  S  E  Y  N  I  L  C  I  A  V  D  *  Y  R  W  L  I  S  *  F  L  V  V  K  L  P  L  A  I  M  V  D  Q  S  D  *  L  S  F  F  P  S  K  K  S  *  L  P  K  N  *  P  I  F  Y  L  N  T  C  R  S  *  H  K  W  L  I  V  I  C  W  V  *  C  A  S  F  S  C  S  Y  *  Y  K  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0180C05.2" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="20717" stop="20580"/>
                    <exon start="20493" stop="20279"/>
                    <exon start="20163" stop="20046"/>
                    <exon start="19959" stop="19827"/>
                    <exon start="19731" stop="19536"/>
                    <exon start="19457" stop="19352"/>
                    <exon start="19273" stop="19133"/>
                    <exon start="19038" stop="18915"/>
                    <exon start="18797" stop="18619"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1347</number_coding_nucleotides>
                  <number_encoded_amino_acids>449</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FQLVCDPSGVVVETTIKELVPALVNWGKELDHLLQVLLSHALGSAQRCQPLSGVEGSIESHLRALGERERWNIDVLMRLLSELFPFVRKKAIDTCPFPLVSDDERLVFSTSVLEQYAGGKMDWPSFEWLHIDCFSALIELASLLPQKEDNLRNRITRFLLAVSDLLGEPYLTHIMLPVFLVAVGDDGDLSYFPATCQSRIRGLKPKTAVAERLATIGVLPLLLAGVLGSPRKHELLTEYLRNLLIQTSGQESQTVKREIFFSVRFLCTFDEHHNMIFNILWEMVVSSEINMKATAANLFKVIVPCIDAKVASTHVLPALVTLGSDQNLNVKYASIDAFGAVAQQYKNDAIVDKIRVQMDAFLEDGSHEATLAVVRALVMAVPHTTEGLRDYLLSKIFLLTATPPPSSDMMRRRERANTFCESIRALDATGLLLLIILLLFHSSLYFLKI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="18750" e_stop="18681"/>
            <exon e_start="17911" e_stop="17202"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.977" e_score="1.000"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="18750" e_stop="18681" e_length="70"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.977">
            <gDNA_intron_boundary i_start="18680" i_stop="17912" i_length="769"/>
          </intron>
          <exon e_serial="2" e_score="0.997">
            <gDNA_exon_boundary e_start="17911" e_stop="17202" e_length="710"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18750" stop="18681"/>
              <exon start="17911" stop="17209"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E539484" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17821" stop="17202"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E465598" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17821" stop="17344"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E465457" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGTGACATGATGCGTCGTCGTGAGAGAGCCAACACATTTTGTGAATCAATTCGTGCTCTTGATGCTACTG : ATCTTTCTGCTTCAAGTGTCAGAGACTTCCTTCTACCTGCAATTCAAAATCTGTTAAAAGATGCTGATTCTCTTGATCCAGCACACAAAGAAGCTCTGGAGATCGTAATGAGGGAAAGATCTGGTGGAACATTTGATACGATTAGTAAGGTAATGGGTGCTCATCTGGGAATTGCGTCATCAGTAAGCAGCTTCTTTGGCGAAGGTGGTTTACTAGGGAAAAGGGAAGCTGGAGATCCAACATCACCACCAGCACCAGTGGAAGTTGAACCTCTGAGGCCTGTCCTCACACATGCAGCACCAGCAGAAGACACTAGATTTAGGCGGATCATGAGAGGTGGTTTTACAGACATGCTCAGAGGAAAAGCAAAGGGCGCTGGGGATACTCCCCCAAGTCAATGATAATGGCTCTTTCATCTGCAGGAGAATTAAAAAGGAAAGTAAGTTCTGTATGTTGTGCAATAGACTACAATGCTTCCATTTGTTGATTCTGCGCTGAAGTTTTCCCTTCACAGGGATGAAATTTTGCAATTTATTTCATTCTTTATGTACAAGAAACGTAATGAATTCGACAACAAAACGAGGAGAAAGTGTATACATTTACTAGTTGTACAAAATGATATGGGAGATTCATAGCTGTCTTGTTTTCATGTACTCTAACCAGTAACCAACAGACCTTTGATAATATACATATATTAAAATAGATACATA</gDNA_template>
            <first_frame> S  D  M  M  R  R  R  E  R  A  N  T  F  C  E  S  I  R  A  L  D  A  T   : D  L  S  A  S  S  V  R  D  F  L  L  P  A  I  Q  N  L  L  K  D  A  D  S  L  D  P  A  H  K  E  A  L  E  I  V  M  R  E  R  S  G  G  T  F  D  T  I  S  K  V  M  G  A  H  L  G  I  A  S  S  V  S  S  F  F  G  E  G  G  L  L  G  K  R  E  A  G  D  P  T  S  P  P  A  P  V  E  V  E  P  L  R  P  V  L  T  H  A  A  P  A  E  D  T  R  F  R  R  I  M  R  G  G  F  T  D  M  L  R  G  K  A  K  G  A  G  D  T  P  P  S  Q  *  *  W  L  F  H  L  Q  E  N  *  K  G  K  *  V  L  Y  V  V  Q  *  T  T  M  L  P  F  V  D  S  A  L  K  F  S  L  H  R  D  E  I  L  Q  F  I  S  F  F  M  Y  K  K  R  N  E  F  D  N  K  T  R  R  K  C  I  H  L  L  V  V  Q  N  D  M  G  D  S  *  L  S  C  F  H  V  L  *  P  V  T  N  R  P  L  I  I  Y  I  Y  *  N  R  Y  I </first_frame>
            <second_frame>  V  T  *  C  V  V  V  R  E  P  T  H  F  V  N  Q  F  V  L  L  M  L  L  :  I  F  L  L  Q  V  S  E  T  S  F  Y  L  Q  F  K  I  C  *  K  M  L  I  L  L  I  Q  H  T  K  K  L  W  R  S  *  *  G  K  D  L  V  E  H  L  I  R  L  V  R  *  W  V  L  I  W  E  L  R  H  Q  *  A  A  S  L  A  K  V  V  Y  *  G  K  G  K  L  E  I  Q  H  H  H  Q  H  Q  W  K  L  N  L  *  G  L  S  S  H  M  Q  H  Q  Q  K  T  L  D  L  G  G  S  *  E  V  V  L  Q  T  C  S  E  E  K  Q  R  A  L  G  I  L  P  Q  V  N  D  N  G  S  F  I  C  R  R  I  K  K  E  S  K  F  C  M  L  C  N  R  L  Q  C  F  H  L  L  I  L  R  *  S  F  P  F  T  G  M  K  F  C  N  L  F  H  S  L  C  T  R  N  V  M  N  S  T  T  K  R  G  E  S  V  Y  I  Y  *  L  Y  K  M  I  W  E  I  H  S  C  L  V  F  M  Y  S  N  Q  *  P  T  D  L  *  *  Y  T  Y  I  K  I  D  T   </second_frame>
            <third_frame>   *  H  D  A  S  S  *  E  S  Q  H  I  L  *  I  N  S  C  S  *  C  Y  * :   S  F  C  F  K  C  Q  R  L  P  S  T  C  N  S  K  S  V  K  R  C  *  F  S  *  S  S  T  Q  R  S  S  G  D  R  N  E  G  K  I  W  W  N  I  *  Y  D  *  *  G  N  G  C  S  S  G  N  C  V  I  S  K  Q  L  L  W  R  R  W  F  T  R  E  K  G  S  W  R  S  N  I  T  T  S  T  S  G  S  *  T  S  E  A  C  P  H  T  C  S  T  S  R  R  H  *  I  *  A  D  H  E  R  W  F  Y  R  H  A  Q  R  K  S  K  G  R  W  G  Y  S  P  K  S  M  I  M  A  L  S  S  A  G  E  L  K  R  K  V  S  S  V  C  C  A  I  D  Y  N  A  S  I  C  *  F  C  A  E  V  F  P  S  Q  G  *  N  F  A  I  Y  F  I  L  Y  V  Q  E  T  *  *  I  R  Q  Q  N  E  E  K  V  Y  T  F  T  S  C  T  K  *  Y  G  R  F  I  A  V  L  F  S  C  T  L  T  S  N  Q  Q  T  F  D  N  I  H  I  L  K  *  I  H  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0180C05.2" strand="-"/>
                <serials PGL_serial="3" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="18750" stop="18681"/>
                    <exon start="17911" stop="17511"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>468</number_coding_nucleotides>
                  <number_encoded_amino_acids>156</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SDMMRRRERANTFCESIRALDATDLSASSVRDFLLPAIQNLLKDADSLDPAHKEALEIVMRERSGGTFDTISKVMGAHLGIASSVSSFFGEGGLLGKREAGDPTSPPAPVEVEPLRPVLTHAAPAEDTRFRRIMRGGFTDMLRGKAKGAGDTPPSQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="20497" e_stop="20279"/>
            <exon e_start="20163" e_stop="20046"/>
            <exon e_start="19959" e_stop="19827"/>
            <exon e_start="19731" e_stop="19536"/>
            <exon e_start="19457" e_stop="19352"/>
            <exon e_start="19273" e_stop="19133"/>
            <exon e_start="19038" e_stop="18915"/>
            <exon e_start="18797" e_stop="18314"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.993" acc_prob="0.934" e_score="0.995"/>
          <exon-intron don_prob="0.948" acc_prob="0.978" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.431" acc_prob="0.944" e_score="1.000"/>
          <exon-intron don_prob="0.843" acc_prob="0.928" e_score="0.960"/>
          <exon-intron don_prob="0.979" acc_prob="0.900" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="20497" e_stop="20279" e_length="219"/>
          </exon>
          <intron i_serial="1" don_prob="0.993" acc_prob="0.934">
            <gDNA_intron_boundary i_start="20278" i_stop="20164" i_length="115"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="20163" e_stop="20046" e_length="118"/>
          </exon>
          <intron i_serial="2" don_prob="0.948" acc_prob="0.978">
            <gDNA_intron_boundary i_start="20045" i_stop="19960" i_length="86"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="19959" e_stop="19827" e_length="133"/>
          </exon>
          <intron i_serial="3" don_prob="0.996" acc_prob="0.994">
            <gDNA_intron_boundary i_start="19826" i_stop="19732" i_length="95"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="19731" e_stop="19536" e_length="196"/>
          </exon>
          <intron i_serial="4" don_prob="0.431" acc_prob="0.944">
            <gDNA_intron_boundary i_start="19535" i_stop="19458" i_length="78"/>
          </intron>
          <exon e_serial="5" e_score="0.960">
            <gDNA_exon_boundary e_start="19457" e_stop="19352" e_length="106"/>
          </exon>
          <intron i_serial="5" don_prob="0.843" acc_prob="0.928">
            <gDNA_intron_boundary i_start="19351" i_stop="19274" i_length="78"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="19273" e_stop="19133" e_length="141"/>
          </exon>
          <intron i_serial="6" don_prob="0.979" acc_prob="0.900">
            <gDNA_intron_boundary i_start="19132" i_stop="19039" i_length="94"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="19038" e_stop="18915" e_length="124"/>
          </exon>
          <intron i_serial="7" don_prob="0.900" acc_prob="0.000">
            <gDNA_intron_boundary i_start="18914" i_stop="18798" i_length="117"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="18797" e_stop="18314" e_length="484"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20497" stop="20279"/>
              <exon start="20163" stop="20046"/>
              <exon start="19959" stop="19827"/>
              <exon start="19731" stop="19687"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E276105" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19932" stop="19827"/>
              <exon start="19731" stop="19536"/>
              <exon start="19457" stop="19357"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E235967" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19404" stop="19352"/>
              <exon start="19273" stop="19133"/>
              <exon start="19038" stop="18915"/>
              <exon start="18797" stop="18314"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E704984" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CCAGCGTTGTCAACCACTTTCAGGGGTGGAAGGTTCTATCGAGTCACATCTTCGTGCTTTAGGAGAGAGAGAGCGATGGAACATAGATGTTCTGATGCGCTTACTGTCGGAGTTGTTTCCATTTGTACGCAAGAAAGCTATTGATACCTGTCCATTCCCATTGGTTTCGGACGATGAAAGACTAGTCTTTTCTACTTCAGTTCTTGAACAGTATGCTGG : AGGAAAGATGGACTGGCCTTCTTTTGAGTGGTTGCATATTGACTGCTTTTCAGCGTTGATTGAACTAGCCTCTCTATTACCTCAGAAGGAAGATAACCTAAGGAATCGAATCACGCGG : TTTTTATTGGCAGTTTCAGACCTGCTCGGGGAACCTTACCTGACACACATCATGCTACCTGTATTCTTGGTGGCAGTTGGTGATGATGGTGATTTATCATATTTCCCTGCAACGTGCCAATCAAGAATAAGAG : GTTTGAAACCGAAAACTGCAGTAGCTGAAAGACTTGCTACCATCGGTGTCCTGCCTCTTCTGCTGGCTGGTGTTTTAGGATCTCCTAGGAAGCATGAACTACTGACAGAGTACTTGAGAAATCTCTTGATTCAAACTTCAGGACAAGAGAGTCAGACAGTGAAGCGCGAGATTTTCTTTTCTGTTCGCTTTCTTTG : CACTTTCGATGAACATCACAATATGATTTTTAACATCCTCTGGGAAATGGTTGTGAGTTCTGAAATAAACATGAAGGCAACAGCTGCCAATCTTTTTAAAGTCATT : GTTCCATGTATTGATGCCAAGGTTGCCTCAACACATGTTTTGCCTGCTCTTGTAACGCTTGGTTCTGACCAAAACTTGAATGTGAAATATGCCAGTATTGATGCTTTTGGAGCTGTGGCGCAGCAGTATAAAAATGATGCG : ATTGTTGATAAAATACGTGTTCAAATGGATGCTTTTCTTGAGGATGGATCACATGAAGCTACGTTAGCTGTAGTTCGTGCATTGGTGATGGCAGTGCCACATACCACGGAGGGACTTAGAGATT : ATTTGTTGTCCAAGATTTTCTTACTTACAGCAACACCTCCTCCTTCAAGTGACATGATGCGTCGTCGTGAGAGAGCCAACACATTTTGTGAATCAATTCGTGCTCTTGATGCTACTGGTTTGCTCCTTTTAATTATTCTTCTTCTCTTTCATTCATCTCTTTACTTTCTGAAGATATAAATGTTCTTCAAAATGATCAGCCTCCAGGTTTAGCTGCTTCTTGAGATAAATCAGAGTACAATATACTATGTATTGCAGTGGACTGATACAGGTGGTTGATATCCTGATTTTTGGTTGTGAAACTACCTTTAGCAATCATGGTTGATCAAAGTGATTAGTTGAGTTTTTTCCCATCTAAGAAGAGTTAATTACCTAAAAATTGACCGATTTTTTACCTAAATACATGCCGAAGTTAACATAAATGGTTGATTGTGATTTGTTGGGTTTAGTGTGCATCCTTTTCTTGTTCATATTAATACAAGTGA</gDNA_template>
            <first_frame> P  A  L  S  T  T  F  R  G  G  R  F  Y  R  V  T  S  S  C  F  R  R  E  R  A  M  E  H  R  C  S  D  A  L  T  V  G  V  V  S  I  C  T  Q  E  S  Y  *  Y  L  S  I  P  I  G  F  G  R  *  K  T  S  L  F  Y  F  S  S  *  T  V  C  W  :  R  K  D  G  L  A  F  F  *  V  V  A  Y  *  L  L  F  S  V  D  *  T  S  L  S  I  T  S  E  G  R  *  P  K  E  S  N  H  A   : V  F  I  G  S  F  R  P  A  R  G  T  L  P  D  T  H  H  A  T  C  I  L  G  G  S  W  *  *  W  *  F  I  I  F  P  C  N  V  P  I  K  N  K  R :   F  E  T  E  N  C  S  S  *  K  T  C  Y  H  R  C  P  A  S  S  A  G  W  C  F  R  I  S  *  E  A  *  T  T  D  R  V  L  E  K  S  L  D  S  N  F  R  T  R  E  S  D  S  E  A  R  D  F  L  F  C  S  L  S  L  :  H  F  R  *  T  S  Q  Y  D  F  *  H  P  L  G  N  G  C  E  F  *  N  K  H  E  G  N  S  C  Q  S  F  *  S  H   : C  S  M  Y  *  C  Q  G  C  L  N  T  C  F  A  C  S  C  N  A  W  F  *  P  K  L  E  C  E  I  C  Q  Y  *  C  F  W  S  C  G  A  A  V  *  K  *  C   : D  C  *  *  N  T  C  S  N  G  C  F  S  *  G  W  I  T  *  S  Y  V  S  C  S  S  C  I  G  D  G  S  A  T  Y  H  G  G  T  *  R  L :   F  V  V  Q  D  F  L  T  Y  S  N  T  S  S  F  K  *  H  D  A  S  S  *  E  S  Q  H  I  L  *  I  N  S  C  S  *  C  Y  W  F  A  P  F  N  Y  S  S  S  L  S  F  I  S  L  L  S  E  D  I  N  V  L  Q  N  D  Q  P  P  G  L  A  A  S  *  D  K  S  E  Y  N  I  L  C  I  A  V  D  *  Y  R  W  L  I  S  *  F  L  V  V  K  L  P  L  A  I  M  V  D  Q  S  D  *  L  S  F  F  P  S  K  K  S  *  L  P  K  N  *  P  I  F  Y  L  N  T  C  R  S  *  H  K  W  L  I  V  I  C  W  V  *  C  A  S  F  S  C  S  Y  *  Y  K  * </first_frame>
            <second_frame>  Q  R  C  Q  P  L  S  G  V  E  G  S  I  E  S  H  L  R  A  L  G  E  R  E  R  W  N  I  D  V  L  M  R  L  L  S  E  L  F  P  F  V  R  K  K  A  I  D  T  C  P  F  P  L  V  S  D  D  E  R  L  V  F  S  T  S  V  L  E  Q  Y  A  G :   G  K  M  D  W  P  S  F  E  W  L  H  I  D  C  F  S  A  L  I  E  L  A  S  L  L  P  Q  K  E  D  N  L  R  N  R  I  T  R  :  F  L  L  A  V  S  D  L  L  G  E  P  Y  L  T  H  I  M  L  P  V  F  L  V  A  V  G  D  D  G  D  L  S  Y  F  P  A  T  C  Q  S  R  I  R   : G  L  K  P  K  T  A  V  A  E  R  L  A  T  I  G  V  L  P  L  L  L  A  G  V  L  G  S  P  R  K  H  E  L  L  T  E  Y  L  R  N  L  L  I  Q  T  S  G  Q  E  S  Q  T  V  K  R  E  I  F  F  S  V  R  F  L  C :   T  F  D  E  H  H  N  M  I  F  N  I  L  W  E  M  V  V  S  S  E  I  N  M  K  A  T  A  A  N  L  F  K  V  I  :  V  P  C  I  D  A  K  V  A  S  T  H  V  L  P  A  L  V  T  L  G  S  D  Q  N  L  N  V  K  Y  A  S  I  D  A  F  G  A  V  A  Q  Q  Y  K  N  D  A  :  I  V  D  K  I  R  V  Q  M  D  A  F  L  E  D  G  S  H  E  A  T  L  A  V  V  R  A  L  V  M  A  V  P  H  T  T  E  G  L  R  D   : Y  L  L  S  K  I  F  L  L  T  A  T  P  P  P  S  S  D  M  M  R  R  R  E  R  A  N  T  F  C  E  S  I  R  A  L  D  A  T  G  L  L  L  L  I  I  L  L  L  F  H  S  S  L  Y  F  L  K  I  *  M  F  F  K  M  I  S  L  Q  V  *  L  L  L  E  I  N  Q  S  T  I  Y  Y  V  L  Q  W  T  D  T  G  G  *  Y  P  D  F  W  L  *  N  Y  L  *  Q  S  W  L  I  K  V  I  S  *  V  F  S  H  L  R  R  V  N  Y  L  K  I  D  R  F  F  T  *  I  H  A  E  V  N  I  N  G  *  L  *  F  V  G  F  S  V  H  P  F  L  V  H  I  N  T  S   </second_frame>
            <third_frame>   S  V  V  N  H  F  Q  G  W  K  V  L  S  S  H  I  F  V  L  *  E  R  E  S  D  G  T  *  M  F  *  C  A  Y  C  R  S  C  F  H  L  Y  A  R  K  L  L  I  P  V  H  S  H  W  F  R  T  M  K  D  *  S  F  L  L  Q  F  L  N  S  M  L   : E  E  R  W  T  G  L  L  L  S  G  C  I  L  T  A  F  Q  R  *  L  N  *  P  L  Y  Y  L  R  R  K  I  T  *  G  I  E  S  R  G :   F  Y  W  Q  F  Q  T  C  S  G  N  L  T  *  H  T  S  C  Y  L  Y  S  W  W  Q  L  V  M  M  V  I  Y  H  I  S  L  Q  R  A  N  Q  E  *  E  :  V  *  N  R  K  L  Q  *  L  K  D  L  L  P  S  V  S  C  L  F  C  W  L  V  F  *  D  L  L  G  S  M  N  Y  *  Q  S  T  *  E  I  S  *  F  K  L  Q  D  K  R  V  R  Q  *  S  A  R  F  S  F  L  F  A  F  F   : A  L  S  M  N  I  T  I  *  F  L  T  S  S  G  K  W  L  *  V  L  K  *  T  *  R  Q  Q  L  P  I  F  L  K  S  L :   F  H  V  L  M  P  R  L  P  Q  H  M  F  C  L  L  L  *  R  L  V  L  T  K  T  *  M  *  N  M  P  V  L  M  L  L  E  L  W  R  S  S  I  K  M  M  R :   L  L  I  K  Y  V  F  K  W  M  L  F  L  R  M  D  H  M  K  L  R  *  L  *  F  V  H  W  *  W  Q  C  H  I  P  R  R  D  L  E  I  :  I  C  C  P  R  F  S  Y  L  Q  Q  H  L  L  L  Q  V  T  *  C  V  V  V  R  E  P  T  H  F  V  N  Q  F  V  L  L  M  L  L  V  C  S  F  *  L  F  F  F  S  F  I  H  L  F  T  F  *  R  Y  K  C  S  S  K  *  S  A  S  R  F  S  C  F  L  R  *  I  R  V  Q  Y  T  M  Y  C  S  G  L  I  Q  V  V  D  I  L  I  F  G  C  E  T  T  F  S  N  H  G  *  S  K  *  L  V  E  F  F  P  I  *  E  E  L  I  T  *  K  L  T  D  F  L  P  K  Y  M  P  K  L  T  *  M  V  D  C  D  L  L  G  L  V  C  I  L  F  L  F  I  L  I  Q  V  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0180C05.2" strand="-"/>
                <serials PGL_serial="3" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="20496" stop="20279"/>
                    <exon start="20163" stop="20046"/>
                    <exon start="19959" stop="19827"/>
                    <exon start="19731" stop="19536"/>
                    <exon start="19457" stop="19352"/>
                    <exon start="19273" stop="19133"/>
                    <exon start="19038" stop="18915"/>
                    <exon start="18797" stop="18619"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1212</number_coding_nucleotides>
                  <number_encoded_amino_acids>404</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QRCQPLSGVEGSIESHLRALGERERWNIDVLMRLLSELFPFVRKKAIDTCPFPLVSDDERLVFSTSVLEQYAGGKMDWPSFEWLHIDCFSALIELASLLPQKEDNLRNRITRFLLAVSDLLGEPYLTHIMLPVFLVAVGDDGDLSYFPATCQSRIRGLKPKTAVAERLATIGVLPLLLAGVLGSPRKHELLTEYLRNLLIQTSGQESQTVKREIFFSVRFLCTFDEHHNMIFNILWEMVVSSEINMKATAANLFKVIVPCIDAKVASTHVLPALVTLGSDQNLNVKYASIDAFGAVAQQYKNDAIVDKIRVQMDAFLEDGSHEATLAVVRALVMAVPHTTEGLRDYLLSKIFLLTATPPPSSDMMRRRERANTFCESIRALDATGLLLLIILLLFHSSLYFLKI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="21125" e_stop="20580"/>
            <exon e_start="20493" e_stop="20188"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="21125" e_stop="20580" e_length="546"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.000">
            <gDNA_intron_boundary i_start="20579" i_stop="20494" i_length="86"/>
          </intron>
          <exon e_serial="2" e_score="0.997">
            <gDNA_exon_boundary e_start="20493" e_stop="20188" e_length="306"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21125" stop="20580"/>
              <exon start="20493" stop="20188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E737286" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20716" stop="20580"/>
              <exon start="20493" stop="20302"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E282574" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="4" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CGCCGCTTGCTAGTTGCTCAATCTTGTGGGGAACTTGCTGAATTCGTGCGTCCTGAGATTCGAGATTCTCTTATCTTGTCTATTGTGCAACAGCTCATTGAGGATTCTGCTACAGTTGTTCGGGAGGCTTCTGCTCATAACTTGGCGTTGCTTCTGCCTCTCTTCCCAAGTAGGGACAAATATTTCAAGGTCAGCCTCACTACATAAGCTTCGAGGCAATCATGGAGAAGAAATGTGACTTGAGAGAATTTCCCACAAAGTAAGCTCCGTAGTCTAGGAATGGAGCATTTTCCCTCCCCTGGTCTTAATGTGGCTGCCCAAACTGATTAGATGATAGCATATACATAAATGGATATTCTCCAATTCCTTTATTTTGTTATTGTGTGTGTAAAGGTTGAGGAGATGATGTTTCAATTGGTGTGTGATCCATCTGGAGTGGTAGTGGAAACAACAATCAAGGAACTTGTTCCAGCTTTAGTAAACTGGGGGAAGGAATTGGATCATTTACTACAAGTCTTACTATCTCATGCTTTGGGCTCTGCTCAG : CGTTGTCAACCACTTTCAGGGGTGGAAGGTTCTATCGAGTCACATCTTCGTGCTTTAGGAGAGAGAGAGCGATGGAACATAGATGTTCTGATGCGCTTACTGTCGGAGTTGTTTCCATTTGTACGCAAGAAAGCTATTGATACCTGTCCATTCCCATTGGTTTCGGACGATGAAAGACTAGTCTTTTCTACTTCAGTTCTTGAACAGTATGCTGGGTAATATCCCCTTTTACCTTAACCTGCGTTTCTAATCTACCTTTCTATTCCTTCTTCAAAGGTGCTCTCACAATGTCTAGTTAATACTTGC</gDNA_template>
            <first_frame> R  R  L  L  V  A  Q  S  C  G  E  L  A  E  F  V  R  P  E  I  R  D  S  L  I  L  S  I  V  Q  Q  L  I  E  D  S  A  T  V  V  R  E  A  S  A  H  N  L  A  L  L  L  P  L  F  P  S  R  D  K  Y  F  K  V  S  L  T  T  *  A  S  R  Q  S  W  R  R  N  V  T  *  E  N  F  P  Q  S  K  L  R  S  L  G  M  E  H  F  P  S  P  G  L  N  V  A  A  Q  T  D  *  M  I  A  Y  T  *  M  D  I  L  Q  F  L  Y  F  V  I  V  C  V  K  V  E  E  M  M  F  Q  L  V  C  D  P  S  G  V  V  V  E  T  T  I  K  E  L  V  P  A  L  V  N  W  G  K  E  L  D  H  L  L  Q  V  L  L  S  H  A  L  G  S  A  Q  :  R  C  Q  P  L  S  G  V  E  G  S  I  E  S  H  L  R  A  L  G  E  R  E  R  W  N  I  D  V  L  M  R  L  L  S  E  L  F  P  F  V  R  K  K  A  I  D  T  C  P  F  P  L  V  S  D  D  E  R  L  V  F  S  T  S  V  L  E  Q  Y  A  G  *  Y  P  L  L  P  *  P  A  F  L  I  Y  L  S  I  P  S  S  K  V  L  S  Q  C  L  V  N  T  C </first_frame>
            <second_frame>  A  A  C  *  L  L  N  L  V  G  N  L  L  N  S  C  V  L  R  F  E  I  L  L  S  C  L  L  C  N  S  S  L  R  I  L  L  Q  L  F  G  R  L  L  L  I  T  W  R  C  F  C  L  S  S  Q  V  G  T  N  I  S  R  S  A  S  L  H  K  L  R  G  N  H  G  E  E  M  *  L  E  R  I  S  H  K  V  S  S  V  V  *  E  W  S  I  F  P  P  L  V  L  M  W  L  P  K  L  I  R  *  *  H  I  H  K  W  I  F  S  N  S  F  I  L  L  L  C  V  *  R  L  R  R  *  C  F  N  W  C  V  I  H  L  E  W  *  W  K  Q  Q  S  R  N  L  F  Q  L  *  *  T  G  G  R  N  W  I  I  Y  Y  K  S  Y  Y  L  M  L  W  A  L  L  S :   V  V  N  H  F  Q  G  W  K  V  L  S  S  H  I  F  V  L  *  E  R  E  S  D  G  T  *  M  F  *  C  A  Y  C  R  S  C  F  H  L  Y  A  R  K  L  L  I  P  V  H  S  H  W  F  R  T  M  K  D  *  S  F  L  L  Q  F  L  N  S  M  L  G  N  I  P  F  Y  L  N  L  R  F  *  S  T  F  L  F  L  L  Q  R  C  S  H  N  V  *  L  I  L   </second_frame>
            <third_frame>   P  L  A  S  C  S  I  L  W  G  T  C  *  I  R  A  S  *  D  S  R  F  S  Y  L  V  Y  C  A  T  A  H  *  G  F  C  Y  S  C  S  G  G  F  C  S  *  L  G  V  A  S  A  S  L  P  K  *  G  Q  I  F  Q  G  Q  P  H  Y  I  S  F  E  A  I  M  E  K  K  C  D  L  R  E  F  P  T  K  *  A  P  *  S  R  N  G  A  F  S  L  P  W  S  *  C  G  C  P  N  *  L  D  D  S  I  Y  I  N  G  Y  S  P  I  P  L  F  C  Y  C  V  C  K  G  *  G  D  D  V  S  I  G  V  *  S  I  W  S  G  S  G  N  N  N  Q  G  T  C  S  S  F  S  K  L  G  E  G  I  G  S  F  T  T  S  L  T  I  S  C  F  G  L  C  S   : A  L  S  T  T  F  R  G  G  R  F  Y  R  V  T  S  S  C  F  R  R  E  R  A  M  E  H  R  C  S  D  A  L  T  V  G  V  V  S  I  C  T  Q  E  S  Y  *  Y  L  S  I  P  I  G  F  G  R  *  K  T  S  L  F  Y  F  S  S  *  T  V  C  W  V  I  S  P  F  T  L  T  C  V  S  N  L  P  F  Y  S  F  F  K  G  A  L  T  M  S  S  *  Y  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0180C05.2" strand="-"/>
                <serials PGL_serial="3" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="20777" stop="20580"/>
                    <exon start="20493" stop="20275"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>414</number_coding_nucleotides>
                  <number_encoded_amino_acids>138</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MDILQFLYFVIVCVKVEEMMFQLVCDPSGVVVETTIKELVPALVNWGKELDHLLQVLLSHALGSAQRCQPLSGVEGSIESHLRALGERERWNIDVLMRLLSELFPFVRKKAIDTCPFPLVSDDERLVFSTSVLEQYAG*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0180C05.2" strand="-"/>
                <serials PGL_serial="3" AGS_serial="4" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="21112" stop="20888"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>222</number_coding_nucleotides>
                  <number_encoded_amino_acids>74</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLNLVGNLLNSCVLRFEILLSCLLCNSSLRILLQLFGRLLLITWRCFCLSSQVGTNISRSASLHKLRGNHGEEM*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="24740" PGL_stop="24546"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="24740" e_stop="24546"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="24740" e_stop="24546" e_length="195"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24740" stop="24546"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220814" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24740" stop="24546"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E221216" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTTTTTCTGATTTGGGTCCTTTGAAGGATAATGAGCGGAAGGATTTGAACTATGCTGTAAAGGAGTATTTACTATTAGCAGGATATCGCTTGACTGCAATGACATTATTGGAAGAGGTAGTAATTGATTGAAAGGGGACTTGCTGATTTCTTGATGTTCATCACTAAACTGAAGAAGAATTGCATTTTATTCAAC</gDNA_template>
            <first_frame> L  F  L  I  W  V  L  *  R  I  M  S  G  R  I  *  T  M  L  *  R  S  I  Y  Y  *  Q  D  I  A  *  L  Q  *  H  Y  W  K  R  *  *  L  I  E  R  G  L  A  D  F  L  M  F  I  T  K  L  K  K  N  C  I  L  F  N </first_frame>
            <second_frame>  F  F  *  F  G  S  F  E  G  *  *  A  E  G  F  E  L  C  C  K  G  V  F  T  I  S  R  I  S  L  D  C  N  D  I  I  G  R  G  S  N  *  L  K  G  D  L  L  I  S  *  C  S  S  L  N  *  R  R  I  A  F  Y  S   </second_frame>
            <third_frame>   F  S  D  L  G  P  L  K  D  N  E  R  K  D  L  N  Y  A  V  K  E  Y  L  L  L  A  G  Y  R  L  T  A  M  T  L  L  E  E  V  V  I  D  *  K  G  T  C  *  F  L  D  V  H  H  *  T  E  E  E  L  H  F  I  Q  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0180C05.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="30887" PGL_stop="31983"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="30887" e_stop="31147"/>
            <exon e_start="31273" e_stop="31395"/>
            <exon e_start="31468" e_stop="31863"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.446" e_score="0.896"/>
          <exon-intron don_prob="0.993" acc_prob="0.795" e_score="0.992"/>
          <exon-only e_score="0.960"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.896">
            <gDNA_exon_boundary e_start="30887" e_stop="31147" e_length="261"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.446">
            <gDNA_intron_boundary i_start="31148" i_stop="31272" i_length="125"/>
          </intron>
          <exon e_serial="2" e_score="0.992">
            <gDNA_exon_boundary e_start="31273" e_stop="31395" e_length="123"/>
          </exon>
          <intron i_serial="2" don_prob="0.993" acc_prob="0.795">
            <gDNA_intron_boundary i_start="31396" i_stop="31467" i_length="72"/>
          </intron>
          <exon e_serial="3" e_score="0.960">
            <gDNA_exon_boundary e_start="31468" e_stop="31863" e_length="396"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30887" stop="31147"/>
              <exon start="31273" stop="31395"/>
              <exon start="31468" stop="31863"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E545770" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30888" stop="31147"/>
              <exon start="31273" stop="31395"/>
              <exon start="31468" stop="31520"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355706" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGAAAAGACGATAAAACTTTCTTGTTTTGCTGATTAGACGGAGTGAAGGGTAAGTAAATCATTTTGTGCCACTAGATTGATAGTTTTGAGTTGCCCCTTGGAGGAAAAGACAAGATTTTTGCTTGTAATAGCAGCCAATCATCAATAGCTTTATCCCTCCTCCTCAATTTTTCCCTTTATTTTTATGGAGCTCATAGCACCTGCTCCAACTGGCAATTCCAACATCATTTTTCTGATGTACTTTCCACCAACCATTAGCAG : AGCAATCCAGAAGGAGGGGAGAGTTTCATGAAAGAGAGCTTAGGGTCATCAGTTAAGGCAGCCATTGATTTGTACAAAGGAAATTCTGCAATGAACCAATCCTCAATTACCAAGTCTTTAGAG : AAGCCATATGCAAGAACCAGCCAACTTCACATAGCAAAAAGGGACATGGGACGACTGGGTGAGAGCAGAAAAGTTGCAGAGGTAGAAAAAGCCCAAGCAGAAACTGAGCTTTTGGACGCGAGAAAGATGGTGAAGGAGCTAAGTTCAAGGATAGAAGAGTTGAATTCAAGATTAAGTGTCCAGAATCAAGATATGGAGAAACTAAAGACGGCAAAAAGAGGGGGAAATTGGGGGATGCCACTTCGCAATCATCAGAATAATCAGCACTCCAAAGTAGTAGCAGAGTTGGTATATGCAAAAGAAGATCTGATTAAGCTTAAACAAGATATGGCTTCTATCGTAGAAGAAAAAAGAAGGGCAGAGCAAGATATAGAAACCTCTAATTTGAAAATGCAA</gDNA_template>
            <first_frame> R  K  D  D  K  T  F  L  F  C  *  L  D  G  V  K  G  K  *  I  I  L  C  H  *  I  D  S  F  E  L  P  L  G  G  K  D  K  I  F  A  C  N  S  S  Q  S  S  I  A  L  S  L  L  L  N  F  S  L  Y  F  Y  G  A  H  S  T  C  S  N  W  Q  F  Q  H  H  F  S  D  V  L  S  T  N  H  *  Q  :  S  N  P  E  G  G  E  S  F  M  K  E  S  L  G  S  S  V  K  A  A  I  D  L  Y  K  G  N  S  A  M  N  Q  S  S  I  T  K  S  L  E  :  K  P  Y  A  R  T  S  Q  L  H  I  A  K  R  D  M  G  R  L  G  E  S  R  K  V  A  E  V  E  K  A  Q  A  E  T  E  L  L  D  A  R  K  M  V  K  E  L  S  S  R  I  E  E  L  N  S  R  L  S  V  Q  N  Q  D  M  E  K  L  K  T  A  K  R  G  G  N  W  G  M  P  L  R  N  H  Q  N  N  Q  H  S  K  V  V  A  E  L  V  Y  A  K  E  D  L  I  K  L  K  Q  D  M  A  S  I  V  E  E  K  R  R  A  E  Q  D  I  E  T  S  N  L  K  M  Q </first_frame>
            <second_frame>  E  K  T  I  K  L  S  C  F  A  D  *  T  E  *  R  V  S  K  S  F  C  A  T  R  L  I  V  L  S  C  P  L  E  E  K  T  R  F  L  L  V  I  A  A  N  H  Q  *  L  Y  P  S  S  S  I  F  P  F  I  F  M  E  L  I  A  P  A  P  T  G  N  S  N  I  I  F  L  M  Y  F  P  P  T  I  S  R :   A  I  Q  K  E  G  R  V  S  *  K  R  A  *  G  H  Q  L  R  Q  P  L  I  C  T  K  E  I  L  Q  *  T  N  P  Q  L  P  S  L  *  R :   S  H  M  Q  E  P  A  N  F  T  *  Q  K  G  T  W  D  D  W  V  R  A  E  K  L  Q  R  *  K  K  P  K  Q  K  L  S  F  W  T  R  E  R  W  *  R  S  *  V  Q  G  *  K  S  *  I  Q  D  *  V  S  R  I  K  I  W  R  N  *  R  R  Q  K  E  G  E  I  G  G  C  H  F  A  I  I  R  I  I  S  T  P  K  *  *  Q  S  W  Y  M  Q  K  K  I  *  L  S  L  N  K  I  W  L  L  S  *  K  K  K  E  G  Q  S  K  I  *  K  P  L  I  *  K  C   </second_frame>
            <third_frame>   K  R  R  *  N  F  L  V  L  L  I  R  R  S  E  G  *  V  N  H  F  V  P  L  D  *  *  F  *  V  A  P  W  R  K  R  Q  D  F  C  L  *  *  Q  P  I  I  N  S  F  I  P  P  P  Q  F  F  P  L  F  L  W  S  S  *  H  L  L  Q  L  A  I  P  T  S  F  F  *  C  T  F  H  Q  P  L  A   : E  Q  S  R  R  R  G  E  F  H  E  R  E  L  R  V  I  S  *  G  S  H  *  F  V  Q  R  K  F  C  N  E  P  I  L  N  Y  Q  V  F  R   : E  A  I  C  K  N  Q  P  T  S  H  S  K  K  G  H  G  T  T  G  *  E  Q  K  S  C  R  G  R  K  S  P  S  R  N  *  A  F  G  R  E  K  D  G  E  G  A  K  F  K  D  R  R  V  E  F  K  I  K  C  P  E  S  R  Y  G  E  T  K  D  G  K  K  R  G  K  L  G  D  A  T  S  Q  S  S  E  *  S  A  L  Q  S  S  S  R  V  G  I  C  K  R  R  S  D  *  A  *  T  R  Y  G  F  Y  R  R  R  K  K  K  G  R  A  R  Y  R  N  L  *  F  E  N  A  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0180C05.2" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="31145" stop="31147"/>
                    <exon start="31273" stop="31395"/>
                    <exon start="31468" stop="31863"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>522</number_coding_nucleotides>
                  <number_encoded_amino_acids>174</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QSNPEGGESFMKESLGSSVKAAIDLYKGNSAMNQSSITKSLEKPYARTSQLHIAKRDMGRLGESRKVAEVEKAQAETELLDARKMVKELSSRIEELNSRLSVQNQDMEKLKTAKRGGNWGMPLRNHQNNQHSKVVAELVYAKEDLIKLKQDMASIVEEKRRAEQDIETSNLKMQ</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="31170" e_stop="31395"/>
            <exon e_start="31468" e_stop="31983"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.993" acc_prob="0.795" e_score="0.996"/>
          <exon-only e_score="0.983"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="31170" e_stop="31395" e_length="226"/>
          </exon>
          <intron i_serial="1" don_prob="0.993" acc_prob="0.795">
            <gDNA_intron_boundary i_start="31396" i_stop="31467" i_length="72"/>
          </intron>
          <exon e_serial="2" e_score="0.983">
            <gDNA_exon_boundary e_start="31468" e_stop="31983" e_length="516"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31170" stop="31395"/>
              <exon start="31468" stop="31983"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342381" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTATATTGTGCATATAGTTCTTCCACATATGTATATGAAGTTCCTAAGATTTTGCCTTAGCAGCAGACACAGCTCCATATTCTCTTTTGATGCCAATTTATAGAGCAATCCAGAAGGAGGGGAGAGTTTCATGAAAGAGAGCTTAGGGTCATCAGTTAAGGCAGCCATTGATTTGTACAAAGGAAATTCTGCAATGAACCAATCCTCAATTACCAAGTCTTTAGAG : AAGCCATATGCAAGAACCAGCCAACTTCACATAGCAAAAAGGGACATGGGACGACTGGGTGAGAGCAGAAAAGTTGCAGAGGTAGAAAAAGCCCAAGCAGAAACTGAGCTTTTGGACGCGAGAAAGATGGTGAAGGAGCTAAGTTCAAGGATAGAAGAGTTGAATTCAAGATTAAGTGTCCAGAATCAAGATATGGAGAAACTAAAGACGGCAAAAAGAGGGGGAAATTGGGGGATGCCACTTCGCAATCATCAGAATAATCAGCACTCCAAAGTAGTAGCAGAGTTGGTATATGCAAAAGAAGATCTGATTAAGCTTAAACAAGATATGGCTTCTATCGTAGAAGAAAAAAGAAGGGCAGAGCAAGATATAGAAACCTCTAATTTGAAAATGCAATCTTTTGCAAGCAAAGTAGAAGCGTTAAGGAAGGAAGTTGAGGAACTTAATGAAGAGCTCGTGCTAGTTGAGCTAGCTCGAATAGAGGCAATCAAAGAATACAGAGCAATTGAAGCTCAA</gDNA_template>
            <first_frame> L  Y  C  A  Y  S  S  S  T  Y  V  Y  E  V  P  K  I  L  P  *  Q  Q  T  Q  L  H  I  L  F  *  C  Q  F  I  E  Q  S  R  R  R  G  E  F  H  E  R  E  L  R  V  I  S  *  G  S  H  *  F  V  Q  R  K  F  C  N  E  P  I  L  N  Y  Q  V  F  R   : E  A  I  C  K  N  Q  P  T  S  H  S  K  K  G  H  G  T  T  G  *  E  Q  K  S  C  R  G  R  K  S  P  S  R  N  *  A  F  G  R  E  K  D  G  E  G  A  K  F  K  D  R  R  V  E  F  K  I  K  C  P  E  S  R  Y  G  E  T  K  D  G  K  K  R  G  K  L  G  D  A  T  S  Q  S  S  E  *  S  A  L  Q  S  S  S  R  V  G  I  C  K  R  R  S  D  *  A  *  T  R  Y  G  F  Y  R  R  R  K  K  K  G  R  A  R  Y  R  N  L  *  F  E  N  A  I  F  C  K  Q  S  R  S  V  K  E  G  S  *  G  T  *  *  R  A  R  A  S  *  A  S  S  N  R  G  N  Q  R  I  Q  S  N  *  S  S  </first_frame>
            <second_frame>  Y  I  V  H  I  V  L  P  H  M  Y  M  K  F  L  R  F  C  L  S  S  R  H  S  S  I  F  S  F  D  A  N  L  *  S  N  P  E  G  G  E  S  F  M  K  E  S  L  G  S  S  V  K  A  A  I  D  L  Y  K  G  N  S  A  M  N  Q  S  S  I  T  K  S  L  E  :  K  P  Y  A  R  T  S  Q  L  H  I  A  K  R  D  M  G  R  L  G  E  S  R  K  V  A  E  V  E  K  A  Q  A  E  T  E  L  L  D  A  R  K  M  V  K  E  L  S  S  R  I  E  E  L  N  S  R  L  S  V  Q  N  Q  D  M  E  K  L  K  T  A  K  R  G  G  N  W  G  M  P  L  R  N  H  Q  N  N  Q  H  S  K  V  V  A  E  L  V  Y  A  K  E  D  L  I  K  L  K  Q  D  M  A  S  I  V  E  E  K  R  R  A  E  Q  D  I  E  T  S  N  L  K  M  Q  S  F  A  S  K  V  E  A  L  R  K  E  V  E  E  L  N  E  E  L  V  L  V  E  L  A  R  I  E  A  I  K  E  Y  R  A  I  E  A  Q </second_frame>
            <third_frame>   I  L  C  I  *  F  F  H  I  C  I  *  S  S  *  D  F  A  L  A  A  D  T  A  P  Y  S  L  L  M  P  I  Y  R  A  I  Q  K  E  G  R  V  S  *  K  R  A  *  G  H  Q  L  R  Q  P  L  I  C  T  K  E  I  L  Q  *  T  N  P  Q  L  P  S  L  *  R :   S  H  M  Q  E  P  A  N  F  T  *  Q  K  G  T  W  D  D  W  V  R  A  E  K  L  Q  R  *  K  K  P  K  Q  K  L  S  F  W  T  R  E  R  W  *  R  S  *  V  Q  G  *  K  S  *  I  Q  D  *  V  S  R  I  K  I  W  R  N  *  R  R  Q  K  E  G  E  I  G  G  C  H  F  A  I  I  R  I  I  S  T  P  K  *  *  Q  S  W  Y  M  Q  K  K  I  *  L  S  L  N  K  I  W  L  L  S  *  K  K  K  E  G  Q  S  K  I  *  K  P  L  I  *  K  C  N  L  L  Q  A  K  *  K  R  *  G  R  K  L  R  N  L  M  K  S  S  C  *  L  S  *  L  E  *  R  Q  S  K  N  T  E  Q  L  K  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0180C05.2" strand="+"/>
                <serials PGL_serial="5" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="31273" stop="31395"/>
                    <exon start="31468" stop="31983"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>639</number_coding_nucleotides>
                  <number_encoded_amino_acids>213</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SNPEGGESFMKESLGSSVKAAIDLYKGNSAMNQSSITKSLEKPYARTSQLHIAKRDMGRLGESRKVAEVEKAQAETELLDARKMVKELSSRIEELNSRLSVQNQDMEKLKTAKRGGNWGMPLRNHQNNQHSKVVAELVYAKEDLIKLKQDMASIVEEKRRAEQDIETSNLKMQSFASKVEALRKEVEELNEELVLVELARIEAIKEYRAIEAQ</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="32280" PGL_stop="33295"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="32280" e_stop="33295"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="32280" e_stop="33295" e_length="1016"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32280" stop="33153"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E740433" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32281" stop="33054"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E740548" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32470" stop="33295"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E732861" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32530" stop="33287"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E545769" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGACAGCTTTCAGTTCATGGGTTCAATGGACGTTGTGAGGAATGAGCTCAAATGCATCTCAGAGGAATCAGCTCGATTAAAGAAAAAGGGTAACAAGGCAGACTCGACAATTCAGAACCTCAACACGAAGCTTCTGAGGGCAAAAGCCAAACTGGAAGCTGCATCCCACAATGAAGGAAAAGCAACCTCTATTGCTTCAAGTTTATTACTCAGTCTTGAACAATTGACAAATGAAGCTGAAGAATCTGAGAAAGAAAGAGACAATGCCATTGAGGAAGCTGCAAAAGTCGAAGAAGAAATACAGAAAACACAATCTGAAACAGTGTTGGCCGAGGAAAGATGGGAAGCTGCAATACAAGAGCTTGAAACAATCAAATCATCAGAAGCTACTGTCCTAAGAAACCTAAAAAGACTTACTGATGTAACTATGAAAAGTAGAGCATCCGCTTCCACCTCCACAATAACTATTTCCAGATTTGAGTATGAGTACTTAAAAGGACGTGCAGGACAGGCAGTTGAAATTGCTGATAAGAAAGTTGAAGCAGCTGAGGCTTGGGTAAAAGCTTTGCAAGCAAGTGAAAAGGAGATCTCAATGAAGACAGAGGTCATCAGAAAGGAAATCCAAGAGCTTAAGATGGAAGAAGAGCAAAAAGGCCTGAAAATGGAGCATTCACCTTCCGTAAGAATGTTGGTCGATATGCAGTTGCAGAAATGGGAGGAGATACATGGAAAAGACCTGGAGCAATCTCCGAACAGTTCACGTACAAAATCCAACTCAATAAGTGGAAAAATGACACCAGCTAGACGAGCTAAGTTCAGAAAGTCAGCATCTCCTGCACCTCGAACACCTAGAGCTTCTTCCTTCGCGGTTAGGAGAAGAAGAAAGGTAATACCAAACATAGCTAAGTTATTTATTAGCAAGAGCAATGATGAAAACCTGTAAGCTATATTATTGCAGCTGCAAATACTTGCCAAAGTTTTCTGATGTAAAAGATATGATCCCACTAAATCCTAGT</gDNA_template>
            <first_frame> R  Q  L  S  V  H  G  F  N  G  R  C  E  E  *  A  Q  M  H  L  R  G  I  S  S  I  K  E  K  G  *  Q  G  R  L  D  N  S  E  P  Q  H  E  A  S  E  G  K  S  Q  T  G  S  C  I  P  Q  *  R  K  S  N  L  Y  C  F  K  F  I  T  Q  S  *  T  I  D  K  *  S  *  R  I  *  E  R  K  R  Q  C  H  *  G  S  C  K  S  R  R  R  N  T  E  N  T  I  *  N  S  V  G  R  G  K  M  G  S  C  N  T  R  A  *  N  N  Q  I  I  R  S  Y  C  P  K  K  P  K  K  T  Y  *  C  N  Y  E  K  *  S  I  R  F  H  L  H  N  N  Y  F  Q  I  *  V  *  V  L  K  R  T  C  R  T  G  S  *  N  C  *  *  E  S  *  S  S  *  G  L  G  K  S  F  A  S  K  *  K  G  D  L  N  E  D  R  G  H  Q  K  G  N  P  R  A  *  D  G  R  R  A  K  R  P  E  N  G  A  F  T  F  R  K  N  V  G  R  Y  A  V  A  E  M  G  G  D  T  W  K  R  P  G  A  I  S  E  Q  F  T  Y  K  I  Q  L  N  K  W  K  N  D  T  S  *  T  S  *  V  Q  K  V  S  I  S  C  T  S  N  T  *  S  F  F  L  R  G  *  E  K  K  K  G  N  T  K  H  S  *  V  I  Y  *  Q  E  Q  *  *  K  P  V  S  Y  I  I  A  A  A  N  T  C  Q  S  F  L  M  *  K  I  *  S  H  *  I  L   </first_frame>
            <second_frame>  D  S  F  Q  F  M  G  S  M  D  V  V  R  N  E  L  K  C  I  S  E  E  S  A  R  L  K  K  K  G  N  K  A  D  S  T  I  Q  N  L  N  T  K  L  L  R  A  K  A  K  L  E  A  A  S  H  N  E  G  K  A  T  S  I  A  S  S  L  L  L  S  L  E  Q  L  T  N  E  A  E  E  S  E  K  E  R  D  N  A  I  E  E  A  A  K  V  E  E  E  I  Q  K  T  Q  S  E  T  V  L  A  E  E  R  W  E  A  A  I  Q  E  L  E  T  I  K  S  S  E  A  T  V  L  R  N  L  K  R  L  T  D  V  T  M  K  S  R  A  S  A  S  T  S  T  I  T  I  S  R  F  E  Y  E  Y  L  K  G  R  A  G  Q  A  V  E  I  A  D  K  K  V  E  A  A  E  A  W  V  K  A  L  Q  A  S  E  K  E  I  S  M  K  T  E  V  I  R  K  E  I  Q  E  L  K  M  E  E  E  Q  K  G  L  K  M  E  H  S  P  S  V  R  M  L  V  D  M  Q  L  Q  K  W  E  E  I  H  G  K  D  L  E  Q  S  P  N  S  S  R  T  K  S  N  S  I  S  G  K  M  T  P  A  R  R  A  K  F  R  K  S  A  S  P  A  P  R  T  P  R  A  S  S  F  A  V  R  R  R  R  K  V  I  P  N  I  A  K  L  F  I  S  K  S  N  D  E  N  L  *  A  I  L  L  Q  L  Q  I  L  A  K  V  F  *  C  K  R  Y  D  P  T  K  S  *  </second_frame>
            <third_frame>   T  A  F  S  S  W  V  Q  W  T  L  *  G  M  S  S  N  A  S  Q  R  N  Q  L  D  *  R  K  R  V  T  R  Q  T  R  Q  F  R  T  S  T  R  S  F  *  G  Q  K  P  N  W  K  L  H  P  T  M  K  E  K  Q  P  L  L  L  Q  V  Y  Y  S  V  L  N  N  *  Q  M  K  L  K  N  L  R  K  K  E  T  M  P  L  R  K  L  Q  K  S  K  K  K  Y  R  K  H  N  L  K  Q  C  W  P  R  K  D  G  K  L  Q  Y  K  S  L  K  Q  S  N  H  Q  K  L  L  S  *  E  T  *  K  D  L  L  M  *  L  *  K  V  E  H  P  L  P  P  P  Q  *  L  F  P  D  L  S  M  S  T  *  K  D  V  Q  D  R  Q  L  K  L  L  I  R  K  L  K  Q  L  R  L  G  *  K  L  C  K  Q  V  K  R  R  S  Q  *  R  Q  R  S  S  E  R  K  S  K  S  L  R  W  K  K  S  K  K  A  *  K  W  S  I  H  L  P  *  E  C  W  S  I  C  S  C  R  N  G  R  R  Y  M  E  K  T  W  S  N  L  R  T  V  H  V  Q  N  P  T  Q  *  V  E  K  *  H  Q  L  D  E  L  S  S  E  S  Q  H  L  L  H  L  E  H  L  E  L  L  P  S  R  L  G  E  E  E  R  *  Y  Q  T  *  L  S  Y  L  L  A  R  A  M  M  K  T  C  K  L  Y  Y  C  S  C  K  Y  L  P  K  F  S  D  V  K  D  M  I  P  L  N  P  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0180C05.2" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="32281" stop="33222"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>939</number_coding_nucleotides>
                  <number_encoded_amino_acids>313</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DSFQFMGSMDVVRNELKCISEESARLKKKGNKADSTIQNLNTKLLRAKAKLEAASHNEGKATSIASSLLLSLEQLTNEAEESEKERDNAIEEAAKVEEEIQKTQSETVLAEERWEAAIQELETIKSSEATVLRNLKRLTDVTMKSRASASTSTITISRFEYEYLKGRAGQAVEIADKKVEAAEAWVKALQASEKEISMKTEVIRKEIQELKMEEEQKGLKMEHSPSVRMLVDMQLQKWEEIHGKDLEQSPNSSRTKSNSISGKMTPARRAKFRKSASPAPRTPRASSFAVRRRRKVIPNIAKLFISKSNDENL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="33838" PGL_stop="34634"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="33838" e_stop="34634"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.959"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.959">
            <gDNA_exon_boundary e_start="33838" e_stop="34634" e_length="797"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33838" stop="34361"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E421042" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33982" stop="34634"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E427945" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAGACAGATATTTATGGTAAAACTCACACTGTTATTCATCACATGTATTCTGAGCAAACAAACAAAAACAACTACTTTCAGTCTTCACCACTGTTTAACTTTCTTCAATTTTTCTATTTTTTGGGTGTCGATGTATTCAGAGTATGGGGATTGTCCTAACAAATATTAAATAAAGAGACAAACAAACTACACAAGAAAATCTTATGGTTTATGTGCCTCAAACGACATGAAAGAATAAATCTTAAAATTTGTGAACTATAACAAAAGATGATCCCACTATCAAAACTTTTGATCTTATTGTCGTAGCCTCACTGAGGATGTGATGGTGCCTGGTTCATGACATTGTTACTGTGCATCTGCATGGAAGACTCTGACAGTAATACTGCCGCCCCCTTTGTAATGGTTTGGCACTGGGAAATGAAAGAAGGTGGAGGAGGCTGAGATTTATATATCTGATTGTATGCAAGATCATCGTCAAACTCATTTGCATCATTTGCAGCAGGAACTGATGCAGTTGAGACAGGTTGGGAAGTAAGCTGTGGTTCAGGAAGGACAGTATATTGTTGCTGAGTCTGAGAAGGCGCACTAATGGGTAGTGATGCTGTTGGGACAGTCGTGTACACTTTTGGACCTGACTCAGGCACTGATTGAGCCGCCATGACCTCCTTATAAGCTACTGATGGAGGGTTTATGACACTTTGTGAATGCAAGGGTGGCCGATTGGACGCCATCACTGCTGCATGATTAATGTTGGGCAGTACTGACATACTGTGAGATTGCATTTGCTGCACAGGAAC</gDNA_template>
            <first_frame> *  T  D  I  Y  G  K  T  H  T  V  I  H  H  M  Y  S  E  Q  T  N  K  N  N  Y  F  Q  S  S  P  L  F  N  F  L  Q  F  F  Y  F  L  G  V  D  V  F  R  V  W  G  L  S  *  Q  I  L  N  K  E  T  N  K  L  H  K  K  I  L  W  F  M  C  L  K  R  H  E  R  I  N  L  K  I  C  E  L  *  Q  K  M  I  P  L  S  K  L  L  I  L  L  S  *  P  H  *  G  C  D  G  A  W  F  M  T  L  L  L  C  I  C  M  E  D  S  D  S  N  T  A  A  P  F  V  M  V  W  H  W  E  M  K  E  G  G  G  G  *  D  L  Y  I  *  L  Y  A  R  S  S  S  N  S  F  A  S  F  A  A  G  T  D  A  V  E  T  G  W  E  V  S  C  G  S  G  R  T  V  Y  C  C  *  V  *  E  G  A  L  M  G  S  D  A  V  G  T  V  V  Y  T  F  G  P  D  S  G  T  D  *  A  A  M  T  S  L  *  A  T  D  G  G  F  M  T  L  C  E  C  K  G  G  R  L  D  A  I  T  A  A  *  L  M  L  G  S  T  D  I  L  *  D  C  I  C  C  T  G   </first_frame>
            <second_frame>  R  Q  I  F  M  V  K  L  T  L  L  F  I  T  C  I  L  S  K  Q  T  K  T  T  T  F  S  L  H  H  C  L  T  F  F  N  F  S  I  F  W  V  S  M  Y  S  E  Y  G  D  C  P  N  K  Y  *  I  K  R  Q  T  N  Y  T  R  K  S  Y  G  L  C  A  S  N  D  M  K  E  *  I  L  K  F  V  N  Y  N  K  R  *  S  H  Y  Q  N  F  *  S  Y  C  R  S  L  T  E  D  V  M  V  P  G  S  *  H  C  Y  C  A  S  A  W  K  T  L  T  V  I  L  P  P  P  L  *  W  F  G  T  G  K  *  K  K  V  E  E  A  E  I  Y  I  S  D  C  M  Q  D  H  R  Q  T  H  L  H  H  L  Q  Q  E  L  M  Q  L  R  Q  V  G  K  *  A  V  V  Q  E  G  Q  Y  I  V  A  E  S  E  K  A  H  *  W  V  V  M  L  L  G  Q  S  C  T  L  L  D  L  T  Q  A  L  I  E  P  P  *  P  P  Y  K  L  L  M  E  G  L  *  H  F  V  N  A  R  V  A  D  W  T  P  S  L  L  H  D  *  C  W  A  V  L  T  Y  C  E  I  A  F  A  A  Q  E  </second_frame>
            <third_frame>   D  R  Y  L  W  *  N  S  H  C  Y  S  S  H  V  F  *  A  N  K  Q  K  Q  L  L  S  V  F  T  T  V  *  L  S  S  I  F  L  F  F  G  C  R  C  I  Q  S  M  G  I  V  L  T  N  I  K  *  R  D  K  Q  T  T  Q  E  N  L  M  V  Y  V  P  Q  T  T  *  K  N  K  S  *  N  L  *  T  I  T  K  D  D  P  T  I  K  T  F  D  L  I  V  V  A  S  L  R  M  *  W  C  L  V  H  D  I  V  T  V  H  L  H  G  R  L  *  Q  *  Y  C  R  P  L  C  N  G  L  A  L  G  N  E  R  R  W  R  R  L  R  F  I  Y  L  I  V  C  K  I  I  V  K  L  I  C  I  I  C  S  R  N  *  C  S  *  D  R  L  G  S  K  L  W  F  R  K  D  S  I  L  L  L  S  L  R  R  R  T  N  G  *  *  C  C  W  D  S  R  V  H  F  W  T  *  L  R  H  *  L  S  R  H  D  L  L  I  S  Y  *  W  R  V  Y  D  T  L  *  M  Q  G  W  P  I  G  R  H  H  C  C  M  I  N  V  G  Q  Y  *  H  T  V  R  L  H  L  L  H  R  N </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0180C05.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="36170" PGL_stop="33861"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="36170" e_stop="35932"/>
            <exon e_start="34995" e_stop="33861"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.992" e_score="0.962"/>
          <exon-only e_score="0.971"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.962">
            <gDNA_exon_boundary e_start="36170" e_stop="35932" e_length="239"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.992">
            <gDNA_intron_boundary i_start="35931" i_stop="34996" i_length="936"/>
          </intron>
          <exon e_serial="2" e_score="0.971">
            <gDNA_exon_boundary e_start="34995" e_stop="33861" e_length="1135"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36170" stop="35932"/>
              <exon start="34995" stop="34740"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E203802" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35955" stop="35932"/>
              <exon start="34995" stop="34274"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E427944" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35955" stop="35932"/>
              <exon start="34995" stop="34777"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E478195" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34715" stop="34247"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319310" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34361" stop="33861"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E407172" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34361" stop="33861"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E421041" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAAGGTGATAATTTGAGTGCAATCGGAGGGAGTGCTGGAGATGCCAAGCAAACATTGGATTTTGGTGGTGGTTCAGTGCCCGAGTCTATGGTTTTGGAGACGAGCTCTTCATTTGGGTCGACCAGTTCTTCCATTTCTATGTCTAATATGCCTGCTATTGGAGTTCAAGCCGAGGATGGTGGCGTCAATTTGCAGGACAAAAGAGTGAGAGTGCCCTCATCATCAGCTTCAATAGAGAG : CGATAGTATCATGGGAGGTGCGGGTTTTCAACCTAAAGTTGGAATTCACCAAGAACCACTTATTCAAGTTATGTCCAGTATGGCCTCCCACAGTCTCTTCGAAGCAGAAGGCTCCAATGCCAGTCCCTCTCTCATTCAGACGCCAAAAATGGTTCAGGTTTCTGGGTATCCACTACCTCAGACATTGGATGGGAAGCAGCCCCAACCTGGAATTCAGTATGTTCATGGCGGTGCCTGTTATGTACCTCATTATCCTAGCGGTCCTCTGCCAGTATCATCCTGTTATCCATTTTATCAGGTTCCCATGCAGCAGCCACAACAAACTCCTTATCCTCTGAATCAACAATACCCAATATACTTGGTTCCTGTGCAGCAAATGCAATCTCACAGTATGTCAGTACTGCCCAACATTAATCATGCAGCAGTGATGGCGTCCAATCGGCCACCCTTGCATTCACAAAGTGTCATAAACCCTCCATCAGTAGCTTATAAGGAGGTCATGGCGGCTCAATCAGTGCCTGAGTCAGGTCCAAAAGTGTACACGACTGTCCCAACAGCATCACTACCCATTAGTGCGCCTTCTCAGACTCAGCAACAATATACTGTCCTTCCTGAACCACAGCTTACTTCCCAACCTGTCTCAACTGCATCAGTTCCTGCTGCAAATGATGCAAATGAGTTTGACGATGATCTTGCATACAATCAGATATATAAATCTCAGCCTCCTCCACCTTCTTTCATTTCCCAGTGCCAAACCATTACAAAGGGGGCGGCAGTATTACTGTCAGAGTCTTCCATGCAGATGCACAGTAACAATGTCATGAACCAGGCACCATCACATCCTCAGTGAGGCTACGACAATAAGATCAAAAGTTTTGATAGTGGGATCATCTTTTGTTATAGTTCACAAATTTTAAGATTTATTCTTTCATGTCGTTTGAGGCACATAAACCATAAGATTTTCTTGTGTAGTTTGTTTGTCTCTTTATTTAATATTTGTTAGGACAATCCCCATACTCTGAATACATCGACACCCAAAAAATAGAAAAATTGAAGAAAGTTAAACAGTGGTGAAGACTGAAAGTAGTTGTTTTTGTTTGTTTGCTCAGAATACATGTGATGAATAACAGTGTGA</gDNA_template>
            <first_frame> Q  G  D  N  L  S  A  I  G  G  S  A  G  D  A  K  Q  T  L  D  F  G  G  G  S  V  P  E  S  M  V  L  E  T  S  S  S  F  G  S  T  S  S  S  I  S  M  S  N  M  P  A  I  G  V  Q  A  E  D  G  G  V  N  L  Q  D  K  R  V  R  V  P  S  S  S  A  S  I  E  S :   D  S  I  M  G  G  A  G  F  Q  P  K  V  G  I  H  Q  E  P  L  I  Q  V  M  S  S  M  A  S  H  S  L  F  E  A  E  G  S  N  A  S  P  S  L  I  Q  T  P  K  M  V  Q  V  S  G  Y  P  L  P  Q  T  L  D  G  K  Q  P  Q  P  G  I  Q  Y  V  H  G  G  A  C  Y  V  P  H  Y  P  S  G  P  L  P  V  S  S  C  Y  P  F  Y  Q  V  P  M  Q  Q  P  Q  Q  T  P  Y  P  L  N  Q  Q  Y  P  I  Y  L  V  P  V  Q  Q  M  Q  S  H  S  M  S  V  L  P  N  I  N  H  A  A  V  M  A  S  N  R  P  P  L  H  S  Q  S  V  I  N  P  P  S  V  A  Y  K  E  V  M  A  A  Q  S  V  P  E  S  G  P  K  V  Y  T  T  V  P  T  A  S  L  P  I  S  A  P  S  Q  T  Q  Q  Q  Y  T  V  L  P  E  P  Q  L  T  S  Q  P  V  S  T  A  S  V  P  A  A  N  D  A  N  E  F  D  D  D  L  A  Y  N  Q  I  Y  K  S  Q  P  P  P  P  S  F  I  S  Q  C  Q  T  I  T  K  G  A  A  V  L  L  S  E  S  S  M  Q  M  H  S  N  N  V  M  N  Q  A  P  S  H  P  Q  *  G  Y  D  N  K  I  K  S  F  D  S  G  I  I  F  C  Y  S  S  Q  I  L  R  F  I  L  S  C  R  L  R  H  I  N  H  K  I  F  L  C  S  L  F  V  S  L  F  N  I  C  *  D  N  P  H  T  L  N  T  S  T  P  K  K  *  K  N  *  R  K  L  N  S  G  E  D  *  K  *  L  F  L  F  V  C  S  E  Y  M  *  *  I  T  V  * </first_frame>
            <second_frame>  K  V  I  I  *  V  Q  S  E  G  V  L  E  M  P  S  K  H  W  I  L  V  V  V  Q  C  P  S  L  W  F  W  R  R  A  L  H  L  G  R  P  V  L  P  F  L  C  L  I  C  L  L  L  E  F  K  P  R  M  V  A  S  I  C  R  T  K  E  *  E  C  P  H  H  Q  L  Q  *  R   : A  I  V  S  W  E  V  R  V  F  N  L  K  L  E  F  T  K  N  H  L  F  K  L  C  P  V  W  P  P  T  V  S  S  K  Q  K  A  P  M  P  V  P  L  S  F  R  R  Q  K  W  F  R  F  L  G  I  H  Y  L  R  H  W  M  G  S  S  P  N  L  E  F  S  M  F  M  A  V  P  V  M  Y  L  I  I  L  A  V  L  C  Q  Y  H  P  V  I  H  F  I  R  F  P  C  S  S  H  N  K  L  L  I  L  *  I  N  N  T  Q  Y  T  W  F  L  C  S  K  C  N  L  T  V  C  Q  Y  C  P  T  L  I  M  Q  Q  *  W  R  P  I  G  H  P  C  I  H  K  V  S  *  T  L  H  Q  *  L  I  R  R  S  W  R  L  N  Q  C  L  S  Q  V  Q  K  C  T  R  L  S  Q  Q  H  H  Y  P  L  V  R  L  L  R  L  S  N  N  I  L  S  F  L  N  H  S  L  L  P  N  L  S  Q  L  H  Q  F  L  L  Q  M  M  Q  M  S  L  T  M  I  L  H  T  I  R  Y  I  N  L  S  L  L  H  L  L  S  F  P  S  A  K  P  L  Q  R  G  R  Q  Y  Y  C  Q  S  L  P  C  R  C  T  V  T  M  S  *  T  R  H  H  H  I  L  S  E  A  T  T  I  R  S  K  V  L  I  V  G  S  S  F  V  I  V  H  K  F  *  D  L  F  F  H  V  V  *  G  T  *  T  I  R  F  S  C  V  V  C  L  S  L  Y  L  I  F  V  R  T  I  P  I  L  *  I  H  R  H  P  K  N  R  K  I  E  E  S  *  T  V  V  K  T  E  S  S  C  F  C  L  F  A  Q  N  T  C  D  E  *  Q  C   </second_frame>
            <third_frame>   R  *  *  F  E  C  N  R  R  E  C  W  R  C  Q  A  N  I  G  F  W  W  W  F  S  A  R  V  Y  G  F  G  D  E  L  F  I  W  V  D  Q  F  F  H  F  Y  V  *  Y  A  C  Y  W  S  S  S  R  G  W  W  R  Q  F  A  G  Q  K  S  E  S  A  L  I  I  S  F  N  R  E  :  R  *  Y  H  G  R  C  G  F  S  T  *  S  W  N  S  P  R  T  T  Y  S  S  Y  V  Q  Y  G  L  P  Q  S  L  R  S  R  R  L  Q  C  Q  S  L  S  H  S  D  A  K  N  G  S  G  F  W  V  S  T  T  S  D  I  G  W  E  A  A  P  T  W  N  S  V  C  S  W  R  C  L  L  C  T  S  L  S  *  R  S  S  A  S  I  I  L  L  S  I  L  S  G  S  H  A  A  A  T  T  N  S  L  S  S  E  S  T  I  P  N  I  L  G  S  C  A  A  N  A  I  S  Q  Y  V  S  T  A  Q  H  *  S  C  S  S  D  G  V  Q  S  A  T  L  A  F  T  K  C  H  K  P  S  I  S  S  L  *  G  G  H  G  G  S  I  S  A  *  V  R  S  K  S  V  H  D  C  P  N  S  I  T  T  H  *  C  A  F  S  D  S  A  T  I  Y  C  P  S  *  T  T  A  Y  F  P  T  C  L  N  C  I  S  S  C  C  K  *  C  K  *  V  *  R  *  S  C  I  Q  S  D  I  *  I  S  A  S  S  T  F  F  H  F  P  V  P  N  H  Y  K  G  G  G  S  I  T  V  R  V  F  H  A  D  A  Q  *  Q  C  H  E  P  G  T  I  T  S  S  V  R  L  R  Q  *  D  Q  K  F  *  *  W  D  H  L  L  L  *  F  T  N  F  K  I  Y  S  F  M  S  F  E  A  H  K  P  *  D  F  L  V  *  F  V  C  L  F  I  *  Y  L  L  G  Q  S  P  Y  S  E  Y  I  D  T  Q  K  I  E  K  L  K  K  V  K  Q  W  *  R  L  K  V  V  V  F  V  C  L  L  R  I  H  V  M  N  N  S  V  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0180C05.2" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36170" stop="35932"/>
                    <exon start="34995" stop="34146"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1086</number_coding_nucleotides>
                  <number_encoded_amino_acids>362</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QGDNLSAIGGSAGDAKQTLDFGGGSVPESMVLETSSSFGSTSSSISMSNMPAIGVQAEDGGVNLQDKRVRVPSSSASIESDSIMGGAGFQPKVGIHQEPLIQVMSSMASHSLFEAEGSNASPSLIQTPKMVQVSGYPLPQTLDGKQPQPGIQYVHGGACYVPHYPSGPLPVSSCYPFYQVPMQQPQQTPYPLNQQYPIYLVPVQQMQSHSMSVLPNINHAAVMASNRPPLHSQSVINPPSVAYKEVMAAQSVPESGPKVYTTVPTASLPISAPSQTQQQYTVLPEPQLTSQPVSTASVPAANDANEFDDDLAYNQIYKSQPPPPSFISQCQTITKGAAVLLSESSMQMHSNNVMNQAPSHPQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="42399" PGL_stop="44671"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="42399" e_stop="42455"/>
            <exon e_start="42724" e_stop="42804"/>
            <exon e_start="43491" e_stop="43754"/>
            <exon e_start="43845" e_stop="43932"/>
            <exon e_start="44036" e_stop="44145"/>
            <exon e_start="44255" e_stop="44345"/>
            <exon e_start="44483" e_stop="44671"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.912" acc_prob="0.745" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.167" e_score="1.000"/>
          <exon-intron don_prob="0.941" acc_prob="0.969" e_score="1.000"/>
          <exon-intron don_prob="0.971" acc_prob="0.971" e_score="1.000"/>
          <exon-intron don_prob="0.301" acc_prob="0.223" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="42399" e_stop="42455" e_length="57"/>
          </exon>
          <intron i_serial="1" don_prob="0.912" acc_prob="0.745">
            <gDNA_intron_boundary i_start="42456" i_stop="42723" i_length="268"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="42724" e_stop="42804" e_length="81"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.994">
            <gDNA_intron_boundary i_start="42805" i_stop="43490" i_length="686"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="43491" e_stop="43754" e_length="264"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.167">
            <gDNA_intron_boundary i_start="43755" i_stop="43844" i_length="90"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="43845" e_stop="43932" e_length="88"/>
          </exon>
          <intron i_serial="4" don_prob="0.941" acc_prob="0.969">
            <gDNA_intron_boundary i_start="43933" i_stop="44035" i_length="103"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="44036" e_stop="44145" e_length="110"/>
          </exon>
          <intron i_serial="5" don_prob="0.971" acc_prob="0.971">
            <gDNA_intron_boundary i_start="44146" i_stop="44254" i_length="109"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="44255" e_stop="44345" e_length="91"/>
          </exon>
          <intron i_serial="6" don_prob="0.301" acc_prob="0.223">
            <gDNA_intron_boundary i_start="44346" i_stop="44482" i_length="137"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="44483" e_stop="44671" e_length="189"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42399" stop="42455"/>
              <exon start="42724" stop="42804"/>
              <exon start="43491" stop="43754"/>
              <exon start="43845" stop="43932"/>
              <exon start="44036" stop="44145"/>
              <exon start="44255" stop="44345"/>
              <exon start="44483" stop="44671"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E710024" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGGGATTTGAGATCTGTTTTCGTTTTCAAGAATTTCAGATGCTTTTCGCAGTCTCAG : AACGGATTAAGTCAAAGGTTGGAAACTTCTGCTGGATTTTCTCAACTGTTCCGGCCGTTGATAGCCCACAAGAAACACCAG : GGTAGAATGAGGGATGCCCAGCCTGGATCACATACTGTGAGCGTGAGGTCTCATGGTGTGACGGTTGCATCATATACAGTGAGGTCCCATGGTATAACAGTGGCAAGGACTCATTTAAATGACTGGATGATCCTAATACTACTTTTGGGGATAGTTGTCCTTCTGAATGTTATCCATCCGTTTTACCGGTTTGTTGGGAAAGACATGATGGAAGACCTCAAGTATCCTTTAAAAAGTAATACTGTACCTTTTTGGGCTGTGCCA : GTGTATGCTGTTCTGCTGCCTATGGTTGTATTTCTGCTCATTTATTTTCGGCGAAGAGATGTCTATGATCTTCATCATGCCATACTGG : GCCTTTTGTTCTCTGTTGTGGTAACAGCTGTTATCACAGGTGCTATAAAAGATGCAGTTGGAAGGCCTAGGCCAGACTTCTTCTGGCGCTGTTTTCCAGATGGAAAGGAA : GTTTACGATAAATGGGGAGATGTTGTATGCCATGGTGACAAAAATGTTGTCAGGGAAGGGCATAAAAGTTTTCCAAGTGGTCATACCTCCT : TGTCCTTTGCTGGTCTTGGCTTTCTATCGCTTTATTTATCTGGCAAGATACAAGTCTTTGACTGTAGAGGACATGTTGCTAAACTGTGTCTCGTATTACTTCCACTTCTTCTTGCATCTCTGGTTGCCATTTCTCGGGTGGATGACTATTGGCATCATTGGCAGGATGTGTTTGCTGGAGGTCTGATTG</gDNA_template>
            <first_frame> W  D  L  R  S  V  F  V  F  K  N  F  R  C  F  S  Q  S  Q  :  N  G  L  S  Q  R  L  E  T  S  A  G  F  S  Q  L  F  R  P  L  I  A  H  K  K  H  Q  :  G  R  M  R  D  A  Q  P  G  S  H  T  V  S  V  R  S  H  G  V  T  V  A  S  Y  T  V  R  S  H  G  I  T  V  A  R  T  H  L  N  D  W  M  I  L  I  L  L  L  G  I  V  V  L  L  N  V  I  H  P  F  Y  R  F  V  G  K  D  M  M  E  D  L  K  Y  P  L  K  S  N  T  V  P  F  W  A  V  P  :  V  Y  A  V  L  L  P  M  V  V  F  L  L  I  Y  F  R  R  R  D  V  Y  D  L  H  H  A  I  L   : G  L  L  F  S  V  V  V  T  A  V  I  T  G  A  I  K  D  A  V  G  R  P  R  P  D  F  F  W  R  C  F  P  D  G  K  E  :  V  Y  D  K  W  G  D  V  V  C  H  G  D  K  N  V  V  R  E  G  H  K  S  F  P  S  G  H  T  S   : L  S  F  A  G  L  G  F  L  S  L  Y  L  S  G  K  I  Q  V  F  D  C  R  G  H  V  A  K  L  C  L  V  L  L  P  L  L  L  A  S  L  V  A  I  S  R  V  D  D  Y  W  H  H  W  Q  D  V  F  A  G  G  L  I  </first_frame>
            <second_frame>  G  I  *  D  L  F  S  F  S  R  I  S  D  A  F  R  S  L  R :   T  D  *  V  K  G  W  K  L  L  L  D  F  L  N  C  S  G  R  *  *  P  T  R  N  T  R :   V  E  *  G  M  P  S  L  D  H  I  L  *  A  *  G  L  M  V  *  R  L  H  H  I  Q  *  G  P  M  V  *  Q  W  Q  G  L  I  *  M  T  G  *  S  *  Y  Y  F  W  G  *  L  S  F  *  M  L  S  I  R  F  T  G  L  L  G  K  T  *  W  K  T  S  S  I  L  *  K  V  I  L  Y  L  F  G  L  C  Q :   C  M  L  F  C  C  L  W  L  Y  F  C  S  F  I  F  G  E  E  M  S  M  I  F  I  M  P  Y  W  :  A  F  C  S  L  L  W  *  Q  L  L  S  Q  V  L  *  K  M  Q  L  E  G  L  G  Q  T  S  S  G  A  V  F  Q  M  E  R  K :   F  T  I  N  G  E  M  L  Y  A  M  V  T  K  M  L  S  G  K  G  I  K  V  F  Q  V  V  I  P  P  :  C  P  L  L  V  L  A  F  Y  R  F  I  Y  L  A  R  Y  K  S  L  T  V  E  D  M  L  L  N  C  V  S  Y  Y  F  H  F  F  L  H  L  W  L  P  F  L  G  W  M  T  I  G  I  I  G  R  M  C  L  L  E  V  *  L </second_frame>
            <third_frame>   G  F  E  I  C  F  R  F  Q  E  F  Q  M  L  F  A  V  S   : E  R  I  K  S  K  V  G  N  F  C  W  I  F  S  T  V  P  A  V  D  S  P  Q  E  T  P   : G  *  N  E  G  C  P  A  W  I  T  Y  C  E  R  E  V  S  W  C  D  G  C  I  I  Y  S  E  V  P  W  Y  N  S  G  K  D  S  F  K  *  L  D  D  P  N  T  T  F  G  D  S  C  P  S  E  C  Y  P  S  V  L  P  V  C  W  E  R  H  D  G  R  P  Q  V  S  F  K  K  *  Y  C  T  F  L  G  C  A   : S  V  C  C  S  A  A  Y  G  C  I  S  A  H  L  F  S  A  K  R  C  L  *  S  S  S  C  H  T  G :   P  F  V  L  C  C  G  N  S  C  Y  H  R  C  Y  K  R  C  S  W  K  A  *  A  R  L  L  L  A  L  F  S  R  W  K  G   : S  L  R  *  M  G  R  C  C  M  P  W  *  Q  K  C  C  Q  G  R  A  *  K  F  S  K  W  S  Y  L  L :   V  L  C  W  S  W  L  S  I  A  L  F  I  W  Q  D  T  S  L  *  L  *  R  T  C  C  *  T  V  S  R  I  T  S  T  S  S  C  I  S  G  C  H  F  S  G  G  *  L  L  A  S  L  A  G  C  V  C  W  R  S  D   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0180C05.2" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="42399" stop="42455"/>
                    <exon start="42724" stop="42804"/>
                    <exon start="43491" stop="43754"/>
                    <exon start="43845" stop="43932"/>
                    <exon start="44036" stop="44145"/>
                    <exon start="44255" stop="44345"/>
                    <exon start="44483" stop="44670"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>879</number_coding_nucleotides>
                  <number_encoded_amino_acids>293</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>WDLRSVFVFKNFRCFSQSQNGLSQRLETSAGFSQLFRPLIAHKKHQGRMRDAQPGSHTVSVRSHGVTVASYTVRSHGITVARTHLNDWMILILLLGIVVLLNVIHPFYRFVGKDMMEDLKYPLKSNTVPFWAVPVYAVLLPMVVFLLIYFRRRDVYDLHHAILGLLFSVVVTAVITGAIKDAVGRPRPDFFWRCFPDGKEVYDKWGDVVCHGDKNVVREGHKSFPSGHTSLSFAGLGFLSLYLSGKIQVFDCRGHVAKLCLVLLPLLLASLVAISRVDDYWHHWQDVFAGGLI</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="42400" e_stop="42455"/>
            <exon e_start="42724" e_stop="42804"/>
            <exon e_start="43488" e_stop="43754"/>
            <exon e_start="43845" e_stop="43932"/>
            <exon e_start="44036" e_stop="44040"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.912" acc_prob="0.745" e_score="0.946"/>
          <exon-intron don_prob="0.996" acc_prob="0.990" e_score="0.975"/>
          <exon-intron don_prob="0.000" acc_prob="0.167" e_score="0.996"/>
          <exon-intron don_prob="0.941" acc_prob="0.969" e_score="0.989"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.946">
            <gDNA_exon_boundary e_start="42400" e_stop="42455" e_length="56"/>
          </exon>
          <intron i_serial="1" don_prob="0.912" acc_prob="0.745">
            <gDNA_intron_boundary i_start="42456" i_stop="42723" i_length="268"/>
          </intron>
          <exon e_serial="2" e_score="0.975">
            <gDNA_exon_boundary e_start="42724" e_stop="42804" e_length="81"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.990">
            <gDNA_intron_boundary i_start="42805" i_stop="43487" i_length="683"/>
          </intron>
          <exon e_serial="3" e_score="0.996">
            <gDNA_exon_boundary e_start="43488" e_stop="43754" e_length="267"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.167">
            <gDNA_intron_boundary i_start="43755" i_stop="43844" i_length="90"/>
          </intron>
          <exon e_serial="4" e_score="0.989">
            <gDNA_exon_boundary e_start="43845" e_stop="43932" e_length="88"/>
          </exon>
          <intron i_serial="4" don_prob="0.941" acc_prob="0.969">
            <gDNA_intron_boundary i_start="43933" i_stop="44035" i_length="103"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="44036" e_stop="44040" e_length="5"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42400" stop="42455"/>
              <exon start="42724" stop="42804"/>
              <exon start="43488" stop="43754"/>
              <exon start="43845" stop="43932"/>
              <exon start="44036" stop="44040"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E718708" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGGATTTGAGATCTGTTTTCGTTTTCAAGAATTTCAGATGCTTTTCGCAGTCTCAG : AACGGATTAAGTCAAAGGTTGGAAACTTCTGCTGGATTTTCTCAACTGTTCCGGCCGTTGATAGCCCACAAGAAACACCAG : CAGGGTAGAATGAGGGATGCCCAGCCTGGATCACATACTGTGAGCGTGAGGTCTCATGGTGTGACGGTTGCATCATATACAGTGAGGTCCCATGGTATAACAGTGGCAAGGACTCATTTAAATGACTGGATGATCCTAATACTACTTTTGGGGATAGTTGTCCTTCTGAATGTTATCCATCCGTTTTACCGGTTTGTTGGGAAAGACATGATGGAAGACCTCAAGTATCCTTTAAAAAGTAATACTGTACCTTTTTGGGCTGTGCCA : GTGTATGCTGTTCTGCTGCCTATGGTTGTATTTCTGCTCATTTATTTTCGGCGAAGAGATGTCTATGATCTTCATCATGCCATACTGG : GCCTT</gDNA_template>
            <first_frame> G  I  *  D  L  F  S  F  S  R  I  S  D  A  F  R  S  L  R :   T  D  *  V  K  G  W  K  L  L  L  D  F  L  N  C  S  G  R  *  *  P  T  R  N  T  S :   R  V  E  *  G  M  P  S  L  D  H  I  L  *  A  *  G  L  M  V  *  R  L  H  H  I  Q  *  G  P  M  V  *  Q  W  Q  G  L  I  *  M  T  G  *  S  *  Y  Y  F  W  G  *  L  S  F  *  M  L  S  I  R  F  T  G  L  L  G  K  T  *  W  K  T  S  S  I  L  *  K  V  I  L  Y  L  F  G  L  C  Q :   C  M  L  F  C  C  L  W  L  Y  F  C  S  F  I  F  G  E  E  M  S  M  I  F  I  M  P  Y  W  :  A   </first_frame>
            <second_frame>  G  F  E  I  C  F  R  F  Q  E  F  Q  M  L  F  A  V  S   : E  R  I  K  S  K  V  G  N  F  C  W  I  F  S  T  V  P  A  V  D  S  P  Q  E  T  P   : A  G  *  N  E  G  C  P  A  W  I  T  Y  C  E  R  E  V  S  W  C  D  G  C  I  I  Y  S  E  V  P  W  Y  N  S  G  K  D  S  F  K  *  L  D  D  P  N  T  T  F  G  D  S  C  P  S  E  C  Y  P  S  V  L  P  V  C  W  E  R  H  D  G  R  P  Q  V  S  F  K  K  *  Y  C  T  F  L  G  C  A   : S  V  C  C  S  A  A  Y  G  C  I  S  A  H  L  F  S  A  K  R  C  L  *  S  S  S  C  H  T  G :   P  </second_frame>
            <third_frame>   D  L  R  S  V  F  V  F  K  N  F  R  C  F  S  Q  S  Q  :  N  G  L  S  Q  R  L  E  T  S  A  G  F  S  Q  L  F  R  P  L  I  A  H  K  K  H  Q  :  Q  G  R  M  R  D  A  Q  P  G  S  H  T  V  S  V  R  S  H  G  V  T  V  A  S  Y  T  V  R  S  H  G  I  T  V  A  R  T  H  L  N  D  W  M  I  L  I  L  L  L  G  I  V  V  L  L  N  V  I  H  P  F  Y  R  F  V  G  K  D  M  M  E  D  L  K  Y  P  L  K  S  N  T  V  P  F  W  A  V  P  :  V  Y  A  V  L  L  P  M  V  V  F  L  L  I  Y  F  R  R  R  D  V  Y  D  L  H  H  A  I  L   : G  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0180C05.2" strand="+"/>
                <serials PGL_serial="9" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="42402" stop="42455"/>
                    <exon start="42724" stop="42804"/>
                    <exon start="43488" stop="43754"/>
                    <exon start="43845" stop="43932"/>
                    <exon start="44036" stop="44040"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>495</number_coding_nucleotides>
                  <number_encoded_amino_acids>165</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DLRSVFVFKNFRCFSQSQNGLSQRLETSAGFSQLFRPLIAHKKHQQGRMRDAQPGSHTVSVRSHGVTVASYTVRSHGITVARTHLNDWMILILLLGIVVLLNVIHPFYRFVGKDMMEDLKYPLKSNTVPFWAVPVYAVLLPMVVFLLIYFRRRDVYDLHHAILGL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="-" PGL_start="54969" PGL_stop="54397"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="54969" e_stop="54659"/>
            <exon e_start="54476" e_stop="54397"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.974"/>
          <exon-only e_score="0.938"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.974">
            <gDNA_exon_boundary e_start="54969" e_stop="54659" e_length="311"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="54658" i_stop="54477" i_length="182"/>
          </intron>
          <exon e_serial="2" e_score="0.938">
            <gDNA_exon_boundary e_start="54476" e_stop="54397" e_length="80"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54969" stop="54659"/>
              <exon start="54476" stop="54397"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E367186" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CATGTATCTGCGTCTTTCCTCCATTAACTGTTTTGTGACAATGTCAGATTTTCTTTGAATTCTTGCCTGCATTCCTTTTAAGAAAAATCAAGAACTTATCCATCTTTTTGAAGTTACACCTGTATTCTTAAGGCATATTTACAGGAAATAATGAAATTGTTATTTTCAAGAATATATTGACATTGCAAATATAAAGAAATTCAAGAAAACTTTCTTTCTCCAAAAAATTCTGTTGTTTTTCGTACTGTGTGTTGAAGATGTTCTAGAATTTGTTTTTGAGCCTTTTTATCTTGTATGATTTCAGAAGGGTT : GGTCGTTGTAGCCATAGGATTGCATGCATTACTCAACTAATAGGCCGCTCTGGCGGTTTGTATTCATTGGTTTGCATATA</gDNA_template>
            <first_frame> H  V  S  A  S  F  L  H  *  L  F  C  D  N  V  R  F  S  L  N  S  C  L  H  S  F  *  E  K  S  R  T  Y  P  S  F  *  S  Y  T  C  I  L  K  A  Y  L  Q  E  I  M  K  L  L  F  S  R  I  Y  *  H  C  K  Y  K  E  I  Q  E  N  F  L  S  P  K  N  S  V  V  F  R  T  V  C  *  R  C  S  R  I  C  F  *  A  F  L  S  C  M  I  S  E  G  L :   V  V  V  A  I  G  L  H  A  L  L  N  *  *  A  A  L  A  V  C  I  H  W  F  A  Y  </first_frame>
            <second_frame>  M  Y  L  R  L  S  S  I  N  C  F  V  T  M  S  D  F  L  *  I  L  A  C  I  P  F  K  K  N  Q  E  L  I  H  L  F  E  V  T  P  V  F  L  R  H  I  Y  R  K  *  *  N  C  Y  F  Q  E  Y  I  D  I  A  N  I  K  K  F  K  K  T  F  F  L  Q  K  I  L  L  F  F  V  L  C  V  E  D  V  L  E  F  V  F  E  P  F  Y  L  V  *  F  Q  K  G   : W  S  L  *  P  *  D  C  M  H  Y  S  T  N  R  P  L  W  R  F  V  F  I  G  L  H  I </second_frame>
            <third_frame>   C  I  C  V  F  P  P  L  T  V  L  *  Q  C  Q  I  F  F  E  F  L  P  A  F  L  L  R  K  I  K  N  L  S  I  F  L  K  L  H  L  Y  S  *  G  I  F  T  G  N  N  E  I  V  I  F  K  N  I  L  T  L  Q  I  *  R  N  S  R  K  L  S  F  S  K  K  F  C  C  F  S  Y  C  V  L  K  M  F  *  N  L  F  L  S  L  F  I  L  Y  D  F  R  R  V  :  G  R  C  S  H  R  I  A  C  I  T  Q  L  I  G  R  S  G  G  L  Y  S  L  V  C  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0180C05.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="117192" PGL_stop="117464"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="117192" e_stop="117464"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.974"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.974">
            <gDNA_exon_boundary e_start="117192" e_stop="117464" e_length="273"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="117192" stop="117464"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E249644" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCTGGGTAACCCCTTTTGGCTGTCTTAAAGAACTCTCTATTTACTCAGCTGGAAATTCAGGGGAATTTGATTATGGGGAGTTTTATGGTTCTTGTGAGTTGAATTTGGAGAGTCTTTTGTTGACTGGAATTAAATCAGGGGATAAGGGGGTTGGTTTTTTATGGAGGAATTGCAAAAAGGTAACAACTTTGAAGCTGATAAGCTGTGAAGGGGTTGGTGATCAAGGTTCTTTTTTAACATTTCTTCAGTGTTTAGAGGGTCTTCAAGAATTGG</gDNA_template>
            <first_frame> S  G  *  P  L  L  A  V  L  K  N  S  L  F  T  Q  L  E  I  Q  G  N  L  I  M  G  S  F  M  V  L  V  S  *  I  W  R  V  F  C  *  L  E  L  N  Q  G  I  R  G  L  V  F  Y  G  G  I  A  K  R  *  Q  L  *  S  *  *  A  V  K  G  L  V  I  K  V  L  F  *  H  F  F  S  V  *  R  V  F  K  N  W </first_frame>
            <second_frame>  L  G  N  P  F  W  L  S  *  R  T  L  Y  L  L  S  W  K  F  R  G  I  *  L  W  G  V  L  W  F  L  *  V  E  F  G  E  S  F  V  D  W  N  *  I  R  G  *  G  G  W  F  F  M  E  E  L  Q  K  G  N  N  F  E  A  D  K  L  *  R  G  W  *  S  R  F  F  F  N  I  S  S  V  F  R  G  S  S  R  I   </second_frame>
            <third_frame>   W  V  T  P  F  G  C  L  K  E  L  S  I  Y  S  A  G  N  S  G  E  F  D  Y  G  E  F  Y  G  S  C  E  L  N  L  E  S  L  L  L  T  G  I  K  S  G  D  K  G  V  G  F  L  W  R  N  C  K  K  V  T  T  L  K  L  I  S  C  E  G  V  G  D  Q  G  S  F  L  T  F  L  Q  C  L  E  G  L  Q  E  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0180C05.2" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="117194" stop="117463"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>270</number_coding_nucleotides>
                  <number_encoded_amino_acids>90</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>WVTPFGCLKELSIYSAGNSGEFDYGEFYGSCELNLESLLLTGIKSGDKGVGFLWRNCKKVTTLKLISCEGVGDQGSFLTFLQCLEGLQEL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="+" PGL_start="120160" PGL_stop="120961"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="120160" e_stop="120183"/>
            <exon e_start="120339" e_stop="120620"/>
            <exon e_start="120859" e_stop="120961"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.803" e_score="1.000"/>
          <exon-intron don_prob="0.965" acc_prob="0.970" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="120160" e_stop="120183" e_length="24"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.803">
            <gDNA_intron_boundary i_start="120184" i_stop="120338" i_length="155"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="120339" e_stop="120620" e_length="282"/>
          </exon>
          <intron i_serial="2" don_prob="0.965" acc_prob="0.970">
            <gDNA_intron_boundary i_start="120621" i_stop="120858" i_length="238"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="120859" e_stop="120961" e_length="103"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="120160" stop="120183"/>
              <exon start="120339" stop="120620"/>
              <exon start="120859" stop="120961"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E262669" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGGCGCCATACCTGTGGAGACAGA : CAATTGAAATCATGGGTGATCCTGTCCATGAGAGTGTTCCCTTATCACCAGACCACCGTAATGATGTGATTGAACCAGATAGAAATCTGGAGGAACAGATCATTGAAGACAAGGAAAGTGCGAGATGGAAGCCTCTCGAGGACACATTCCTTCCTCTTTGATCATACGGGATAGTAACTAGAGATGCATGTAGACAAGATACCAGTGAATTGCAATGCCAGGAAAAGAAGGATCATGTCTCTTTGGTCACACGGAAACAAAACAAGAGACATAGAAAATGTG : GATTATGTGATGATCTCAGCAACGTCTACAAGGAAGACTTCATTTCAGCAAAAGTCAAGATGGCATCTTGGGTAAAGTCTCCCAACTATATTTGAAAATGAAT</gDNA_template>
            <first_frame> R  R  H  T  C  G  D  R  :  Q  L  K  S  W  V  I  L  S  M  R  V  F  P  Y  H  Q  T  T  V  M  M  *  L  N  Q  I  E  I  W  R  N  R  S  L  K  T  R  K  V  R  D  G  S  L  S  R  T  H  S  F  L  F  D  H  T  G  *  *  L  E  M  H  V  D  K  I  P  V  N  C  N  A  R  K  R  R  I  M  S  L  W  S  H  G  N  K  T  R  D  I  E  N  V  :  D  Y  V  M  I  S  A  T  S  T  R  K  T  S  F  Q  Q  K  S  R  W  H  L  G  *  S  L  P  T  I  F  E  N  E  </first_frame>
            <second_frame>  G  A  I  P  V  E  T  D :   N  *  N  H  G  *  S  C  P  *  E  C  S  L  I  T  R  P  P  *  *  C  D  *  T  R  *  K  S  G  G  T  D  H  *  R  Q  G  K  C  E  M  E  A  S  R  G  H  I  P  S  S  L  I  I  R  D  S  N  *  R  C  M  *  T  R  Y  Q  *  I  A  M  P  G  K  E  G  S  C  L  F  G  H  T  E  T  K  Q  E  T  *  K  M  W :   I  M  *  *  S  Q  Q  R  L  Q  G  R  L  H  F  S  K  S  Q  D  G  I  L  G  K  V  S  Q  L  Y  L  K  M  N </second_frame>
            <third_frame>   A  P  Y  L  W  R  Q   : T  I  E  I  M  G  D  P  V  H  E  S  V  P  L  S  P  D  H  R  N  D  V  I  E  P  D  R  N  L  E  E  Q  I  I  E  D  K  E  S  A  R  W  K  P  L  E  D  T  F  L  P  L  *  S  Y  G  I  V  T  R  D  A  C  R  Q  D  T  S  E  L  Q  C  Q  E  K  K  D  H  V  S  L  V  T  R  K  Q  N  K  R  H  R  K  C   : G  L  C  D  D  L  S  N  V  Y  K  E  D  F  I  S  A  K  V  K  M  A  S  W  V  K  S  P  N  Y  I  *  K  *   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0180C05.2" strand="+"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="120500" stop="120620"/>
                    <exon start="120859" stop="120953"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>213</number_coding_nucleotides>
                  <number_encoded_amino_acids>71</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SYGIVTRDACRQDTSELQCQEKKDHVSLVTRKQNKRHRKCGLCDDLSNVYKEDFISAKVKMASWVKSPNYI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="+" PGL_start="121311" PGL_stop="121591"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="121311" e_stop="121591"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.989"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.989">
            <gDNA_exon_boundary e_start="121311" e_stop="121591" e_length="281"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="121311" stop="121591"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369869" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAAGGTTGCCCCCAATAAAAAATATATTCGTAAAATTGGTTTAGTTTGCAGGATATTCCCTTAACAGTATGATGGTTGCAGAACCGTGGCTGAATGTTTTTCTAGACTGGTAAGTAATCTGCTATTTTTTTTCTTGAGGATGCAAGTCAATTCTCAAATATTGGTGTTGTAGAGGCTATGATGCTCGCACTCTCCGAGTGTCAGATCCTCCAAAAATACATTTTTTGACATGCAACTAGCCGCGTATTTTATGAATCCAAGCAATGTAGTCTGGAAGTCTT</gDNA_template>
            <first_frame> Q  G  C  P  Q  *  K  I  Y  S  *  N  W  F  S  L  Q  D  I  P  L  T  V  *  W  L  Q  N  R  G  *  M  F  F  *  T  G  K  *  S  A  I  F  F  L  E  D  A  S  Q  F  S  N  I  G  V  V  E  A  M  M  L  A  L  S  E  C  Q  I  L  Q  K  Y  I  F  *  H  A  T  S  R  V  F  Y  E  S  K  Q  C  S  L  E  V   </first_frame>
            <second_frame>  K  V  A  P  N  K  K  Y  I  R  K  I  G  L  V  C  R  I  F  P  *  Q  Y  D  G  C  R  T  V  A  E  C  F  S  R  L  V  S  N  L  L  F  F  F  L  R  M  Q  V  N  S  Q  I  L  V  L  *  R  L  *  C  S  H  S  P  S  V  R  S  S  K  N  T  F  F  D  M  Q  L  A  A  Y  F  M  N  P  S  N  V  V  W  K  S  </second_frame>
            <third_frame>   R  L  P  P  I  K  N  I  F  V  K  L  V  *  F  A  G  Y  S  L  N  S  M  M  V  A  E  P  W  L  N  V  F  L  D  W  *  V  I  C  Y  F  F  S  *  G  C  K  S  I  L  K  Y  W  C  C  R  G  Y  D  A  R  T  L  R  V  S  D  P  P  K  I  H  F  L  T  C  N  *  P  R  I  L  *  I  Q  A  M  *  S  G  S  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0180C05.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="+" PGL_start="139827" PGL_stop="140621"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="139827" e_stop="139883"/>
            <exon e_start="139999" e_stop="140289"/>
            <exon e_start="140404" e_stop="140621"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.989" acc_prob="1.000" e_score="0.982"/>
          <exon-intron don_prob="0.996" acc_prob="0.927" e_score="0.914"/>
          <exon-only e_score="0.935"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.982">
            <gDNA_exon_boundary e_start="139827" e_stop="139883" e_length="57"/>
          </exon>
          <intron i_serial="1" don_prob="0.989" acc_prob="1.000">
            <gDNA_intron_boundary i_start="139884" i_stop="139998" i_length="115"/>
          </intron>
          <exon e_serial="2" e_score="0.914">
            <gDNA_exon_boundary e_start="139999" e_stop="140289" e_length="291"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.927">
            <gDNA_intron_boundary i_start="140290" i_stop="140403" i_length="114"/>
          </intron>
          <exon e_serial="3" e_score="0.935">
            <gDNA_exon_boundary e_start="140404" e_stop="140621" e_length="218"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="139827" stop="139883"/>
              <exon start="139999" stop="140289"/>
              <exon start="140404" stop="140621"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E419137" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="139827" stop="139883"/>
              <exon start="139999" stop="140289"/>
              <exon start="140404" stop="140617"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E443526" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAAAAACCAGCAGTAATGGAGGAGGAGAAACTTTTAACAGAAGGGCTTCTGGAGAAG : AATTTGCCAATTGTAGACTCAAAGGACAAGATAGACGATGCAAATCCATGCAATACCACCAACAATGATATTGCTAACTATGCATCAGTTGAGGAAAAACCTGACGAACCAGTAATTGGAAAAACACATGAAGAATTAGCAATTGAAGATAAATCTGAAGAATCAGTTGTTTCGGAGAAGCTTGAAGAACTAATGGTTGCTGAACAACCGACAGTTGAAGAGAAACCTCAAAAACCAGCAGTTGGGGAGAAACATGAAGAACCAGCCGTTGAAGAGGAGAAACCTGAAAAA : AATATGCTAATTGTAGACTTGAACAACAAAACTGGTAGTGAAATTCCATGCAATGCCGGTAATGATGTTGCACACTTTTCAGACACCGAGGAAAATCCTGAAGAATCGGCATTTCAAGAAAAAACTGAAGAATCAGTCATTGAACAGCAACCTGATGTACCAGCAGTTAAGGAGAAACCTGAAGAACCAACACTTGAGGAGAAAACTGAAGTACTAGT</gDNA_template>
            <first_frame> E  K  P  A  V  M  E  E  E  K  L  L  T  E  G  L  L  E  K  :  N  L  P  I  V  D  S  K  D  K  I  D  D  A  N  P  C  N  T  T  N  N  D  I  A  N  Y  A  S  V  E  E  K  P  D  E  P  V  I  G  K  T  H  E  E  L  A  I  E  D  K  S  E  E  S  V  V  S  E  K  L  E  E  L  M  V  A  E  Q  P  T  V  E  E  K  P  Q  K  P  A  V  G  E  K  H  E  E  P  A  V  E  E  E  K  P  E  K  :  N  M  L  I  V  D  L  N  N  K  T  G  S  E  I  P  C  N  A  G  N  D  V  A  H  F  S  D  T  E  E  N  P  E  E  S  A  F  Q  E  K  T  E  E  S  V  I  E  Q  Q  P  D  V  P  A  V  K  E  K  P  E  E  P  T  L  E  E  K  T  E  V  L   </first_frame>
            <second_frame>  K  N  Q  Q  *  W  R  R  R  N  F  *  Q  K  G  F  W  R  R :   I  C  Q  L  *  T  Q  R  T  R  *  T  M  Q  I  H  A  I  P  P  T  M  I  L  L  T  M  H  Q  L  R  K  N  L  T  N  Q  *  L  E  K  H  M  K  N  *  Q  L  K  I  N  L  K  N  Q  L  F  R  R  S  L  K  N  *  W  L  L  N  N  R  Q  L  K  R  N  L  K  N  Q  Q  L  G  R  N  M  K  N  Q  P  L  K  R  R  N  L  K  K :   I  C  *  L  *  T  *  T  T  K  L  V  V  K  F  H  A  M  P  V  M  M  L  H  T  F  Q  T  P  R  K  I  L  K  N  R  H  F  K  K  K  L  K  N  Q  S  L  N  S  N  L  M  Y  Q  Q  L  R  R  N  L  K  N  Q  H  L  R  R  K  L  K  Y  *  </second_frame>
            <third_frame>   K  T  S  S  N  G  G  G  E  T  F  N  R  R  A  S  G  E   : E  F  A  N  C  R  L  K  G  Q  D  R  R  C  K  S  M  Q  Y  H  Q  Q  *  Y  C  *  L  C  I  S  *  G  K  T  *  R  T  S  N  W  K  N  T  *  R  I  S  N  *  R  *  I  *  R  I  S  C  F  G  E  A  *  R  T  N  G  C  *  T  T  D  S  *  R  E  T  S  K  T  S  S  W  G  E  T  *  R  T  S  R  *  R  G  E  T  *  K   : K  Y  A  N  C  R  L  E  Q  Q  N  W  *  *  N  S  M  Q  C  R  *  *  C  C  T  L  F  R  H  R  G  K  S  *  R  I  G  I  S  R  K  N  *  R  I  S  H  *  T  A  T  *  C  T  S  S  *  G  E  T  *  R  T  N  T  *  G  E  N  *  S  T  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0180C05.2" strand="+"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="139827" stop="139883"/>
                    <exon start="139999" stop="140289"/>
                    <exon start="140404" stop="140619"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>564</number_coding_nucleotides>
                  <number_encoded_amino_acids>188</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EKPAVMEEEKLLTEGLLEKNLPIVDSKDKIDDANPCNTTNNDIANYASVEEKPDEPVIGKTHEELAIEDKSEESVVSEKLEELMVAEQPTVEEKPQKPAVGEKHEEPAVEEEKPEKNMLIVDLNNKTGSEIPCNAGNDVAHFSDTEENPEESAFQEKTEESVIEQQPDVPAVKEKPEEPTLEEKTEVL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="+" PGL_start="141129" PGL_stop="141874"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="141129" e_stop="141360"/>
            <exon e_start="141474" e_stop="141874"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.989" e_score="0.931"/>
          <exon-only e_score="0.898"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.931">
            <gDNA_exon_boundary e_start="141129" e_stop="141360" e_length="232"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.989">
            <gDNA_intron_boundary i_start="141361" i_stop="141473" i_length="113"/>
          </intron>
          <exon e_serial="2" e_score="0.898">
            <gDNA_exon_boundary e_start="141474" e_stop="141874" e_length="401"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="141129" stop="141360"/>
              <exon start="141474" stop="141874"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E590485" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGTTGAGAAAATTCCTGAACAGCCGACAATTGAAGAGAAACCTGAAAACCCAACCGTGGGAGAAGAGTTTGAATTACCATCAGTTGAGGAGACAATCGAAGAACCAAAAATCGAGGAGAAACCTGAAAAACAAGTAATTGAAGAAACACCCAAGGAACTAGCAGTTGAAGAGATGCATGAAGAAACAGCCGTGGAAGAGGAGAAACCTGAAAAGGTAACTCTTTCGGAAAAG : AATATGCTAATTGTAGACTCAACTGAAAAAACCGGCAGTGAAATCCCATGCAATACCAATAATGATGTTGAATACTCTCCAGACAGTGAGGAAAATCCTGAAGAATCGGCAGTTGAAGAAAAAACTGAAGAACCACTCATTGAAGAGAAACCTGATGTACCAGCTATTAAGGAGAAACCCAAAGAACCAACATTTGAGGAGAAATCTGAAGTACCAGTTGAGGAGAAACCTGAAGAACTAGAGATGACAGAGAAACCTGAAGAACCAGCGGCTATAGAAACACCTGAAGAGCTTGCAGGGCAGGAAATACCTGAAGAACTAGACCTTGAAGAGAAACCTGAAGAACCAACAGTTGAAGACACATCTGAAGAACTAGTTGTTGAAAAGAAAGATGAGAAACC</gDNA_template>
            <first_frame> G  *  E  N  S  *  T  A  D  N  *  R  E  T  *  K  P  N  R  G  R  R  V  *  I  T  I  S  *  G  D  N  R  R  T  K  N  R  G  E  T  *  K  T  S  N  *  R  N  T  Q  G  T  S  S  *  R  D  A  *  R  N  S  R  G  R  G  E  T  *  K  G  N  S  F  G  K   : E  Y  A  N  C  R  L  N  *  K  N  R  Q  *  N  P  M  Q  Y  Q  *  *  C  *  I  L  S  R  Q  *  G  K  S  *  R  I  G  S  *  R  K  N  *  R  T  T  H  *  R  E  T  *  C  T  S  Y  *  G  E  T  Q  R  T  N  I  *  G  E  I  *  S  T  S  *  G  E  T  *  R  T  R  D  D  R  E  T  *  R  T  S  G  Y  R  N  T  *  R  A  C  R  A  G  N  T  *  R  T  R  P  *  R  E  T  *  R  T  N  S  *  R  H  I  *  R  T  S  C  *  K  E  R  *  E  T </first_frame>
            <second_frame>  V  E  K  I  P  E  Q  P  T  I  E  E  K  P  E  N  P  T  V  G  E  E  F  E  L  P  S  V  E  E  T  I  E  E  P  K  I  E  E  K  P  E  K  Q  V  I  E  E  T  P  K  E  L  A  V  E  E  M  H  E  E  T  A  V  E  E  E  K  P  E  K  V  T  L  S  E  K  :  N  M  L  I  V  D  S  T  E  K  T  G  S  E  I  P  C  N  T  N  N  D  V  E  Y  S  P  D  S  E  E  N  P  E  E  S  A  V  E  E  K  T  E  E  P  L  I  E  E  K  P  D  V  P  A  I  K  E  K  P  K  E  P  T  F  E  E  K  S  E  V  P  V  E  E  K  P  E  E  L  E  M  T  E  K  P  E  E  P  A  A  I  E  T  P  E  E  L  A  G  Q  E  I  P  E  E  L  D  L  E  E  K  P  E  E  P  T  V  E  D  T  S  E  E  L  V  V  E  K  K  D  E  K   </second_frame>
            <third_frame>   L  R  K  F  L  N  S  R  Q  L  K  R  N  L  K  T  Q  P  W  E  K  S  L  N  Y  H  Q  L  R  R  Q  S  K  N  Q  K  S  R  R  N  L  K  N  K  *  L  K  K  H  P  R  N  *  Q  L  K  R  C  M  K  K  Q  P  W  K  R  R  N  L  K  R  *  L  F  R  K  R :   I  C  *  L  *  T  Q  L  K  K  P  A  V  K  S  H  A  I  P  I  M  M  L  N  T  L  Q  T  V  R  K  I  L  K  N  R  Q  L  K  K  K  L  K  N  H  S  L  K  R  N  L  M  Y  Q  L  L  R  R  N  P  K  N  Q  H  L  R  R  N  L  K  Y  Q  L  R  R  N  L  K  N  *  R  *  Q  R  N  L  K  N  Q  R  L  *  K  H  L  K  S  L  Q  G  R  K  Y  L  K  N  *  T  L  K  R  N  L  K  N  Q  Q  L  K  T  H  L  K  N  *  L  L  K  R  K  M  R  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0180C05.2" strand="+"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="141130" stop="141360"/>
                    <exon start="141474" stop="141872"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>630</number_coding_nucleotides>
                  <number_encoded_amino_acids>210</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VEKIPEQPTIEEKPENPTVGEEFELPSVEETIEEPKIEEKPEKQVIEETPKELAVEEMHEETAVEEEKPEKVTLSEKNMLIVDSTEKTGSEIPCNTNNDVEYSPDSEENPEESAVEEKTEEPLIEEKPDVPAIKEKPKEPTFEEKSEVPVEEKPEELEMTEKPEEPAAIETPEELAGQEIPEELDLEEKPEEPTVEDTSEELVVEKKDEK</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 216 chains have been computed
$ 
$ memory statistics:
$ 113808 bytes spliced alignments in total
$ 56 spliced alignments have been stored
$ 2032 bytes was the average size of a spliced alignment
$ 23744 bytes predicted gene locations in total
$ 15 predicted gene locations have been stored
$ 1582 bytes was the average size of a predicted gene location
$ 1 megabytes was the average size of the backtrace matrix
$ 270 backtrace matrices have been allocated
$ 
$ date finished: 2009-12-01 09:55:09
-->
